BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10669
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P07511|GLYC_RABIT Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus
GN=SHMT1 PE=1 SV=2
Length = 484
Score = 285 bits (729), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 233/464 (50%), Gaps = 132/464 (28%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L +D E+Y +IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 17 SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 76
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------- 113
PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV
Sbjct: 77 YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 136
Query: 114 --------------------EKALPTNNARFDFLS------SGTTCYSRCLDYAR----- 142
+K + + F+ ++ +G Y R + AR
Sbjct: 137 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 196
Query: 143 -----------------FRQICDETDSIMFADMSHISGLIA------------------- 166
R+I DE + + ADM+HISGL+
Sbjct: 197 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 256
Query: 167 ---------------GVKGV-TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
GV+ V KTG++ILY+ E IN+AVFP LQGGPHNHAI +A A+
Sbjct: 257 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 316
Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
QA + EFK YQ QV AN LS +++ GY +VTGG+D HLIL+DLR G + E V
Sbjct: 317 KQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKV 376
Query: 271 LEEIAIACNKNT---------------------------------------GISLAAEIQ 291
LE +IACNKNT GI L +IQ
Sbjct: 377 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQ 436
Query: 292 AISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
+GP+ L +F+ L +E + V AL++E+E ++ F +PG
Sbjct: 437 DDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 480
>sp|P49357|GLYM_FLAPR Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 285 bits (728), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 230/457 (50%), Gaps = 131/457 (28%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ L DPE+ +I+ EK RQ G+ELI SENFTSL+V++ +GS + NKYSEG PG R
Sbjct: 52 LNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 111
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
YYGGN++ID E + Q+R+L+AF LDP +WG NVQP SGSPANF V L
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMAL 171
Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
T +D L T +
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 231
Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
+R DYAR R++CD+ +IM ADM+HISGL+A
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291
Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
G+K V K G+++ YDYE+KIN AVFP LQGGPHNH I +A A+ QA +
Sbjct: 292 PRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTA 351
Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
E+K+YQ QV +N++ ++ ++K GY +V+GGT+ HL+L++L+ + GSKVE VLE + I
Sbjct: 352 EYKAYQEQVMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHI 411
Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
A NKNT + LA +I+ G
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGT 471
Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
KL DF T + ++ I +++ L+ ++E+Y+ QF G
Sbjct: 472 KLKDFVTAM-ESSAIQSEISKLRHDVEEYAKQFPTIG 507
>sp|P50433|GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum
PE=2 SV=1
Length = 518
Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 227/457 (49%), Gaps = 130/457 (28%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ L DPE+ +I+ EK RQ G+ELI SENFTS++V++ +GS + NKYSEG PG R
Sbjct: 52 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 111
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
YYGGN++ID E + Q+R+L+AF LDP +WG NVQP SGSPANF V L
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMAL 171
Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
T +D L T +
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 231
Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
+R DY R R++C++ +I+ ADM+HISGL+A
Sbjct: 232 ASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291
Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
GVK V K G+++ YDYE+KIN AVFP LQGGPHNH I +A A+ QA +
Sbjct: 292 PRGAMIFYRKGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTP 351
Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
E+++YQ QV +N+S + + ++GY +V+GGTD HL+L++++ + GS+VE VLE + I
Sbjct: 352 EYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHI 411
Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
A NKNT + +A +++A G
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGT 471
Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
KL DF L + I ++A L+ ++E+Y+ QF G
Sbjct: 472 KLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIG 508
>sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum
PE=1 SV=1
Length = 518
Score = 280 bits (715), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/457 (35%), Positives = 230/457 (50%), Gaps = 130/457 (28%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ L DPE+ +I+ EK RQ G+ELI SENFTSL+V++ +GS + NKYSEG PG R
Sbjct: 52 LNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 111
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
YYGGN++ID E + Q+R+L+AF LDP +WG NVQP SGSP+NF V L
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMAL 171
Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
T +D L T +
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 231
Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
+R DYAR R++CD+ +++ ADM+HISGL+A
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291
Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
G+K V K G+++ YDYE+KIN AVFP LQGGPHNH I +A A+ QA +
Sbjct: 292 PRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTP 351
Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
E+++YQ QV +N+S + + ++GY +V+GGT+ HL+L++L+ + GS+VE VLE + I
Sbjct: 352 EYRAYQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHI 411
Query: 277 ACNKNT---------------------------------------GISLAAEIQAIS-GP 296
A NKNT +SLA +++A S G
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGT 471
Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
KL DF L + + +++ LK ++E+++ QF G
Sbjct: 472 KLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIG 508
>sp|Q9SZJ5|GLYM_ARATH Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis
thaliana GN=SHM1 PE=1 SV=1
Length = 517
Score = 279 bits (714), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 232/457 (50%), Gaps = 130/457 (28%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ L + DPE+ +I+ EK RQ G+ELI SENFTS++V++ +GS + NKYSEG PG R
Sbjct: 51 LNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 110
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
YYGGN++ID E + Q+R+L+AF LDPE+WG NVQP SGSPANF V L
Sbjct: 111 YYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMAL 170
Query: 118 -----------------------------------PTNNARFDFLSSGTTCYSRCL---- 138
T +D + T + L
Sbjct: 171 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAG 230
Query: 139 --DYARF------RQICDETDSIMFADMSHISGLIA------------------------ 166
YAR R++C++ ++M ADM+HISGL+A
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRG 290
Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
GVK + K G+++LYD+E+KIN AVFP LQGGPHNH I +A A+ QA +
Sbjct: 291 PRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTS 350
Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
E+K+YQ QV +N++ + +++RGY +V+GGTD HL+L++L+ + GS+VE VLE + I
Sbjct: 351 EYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHI 410
Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
A NKNT +++A ++++ G
Sbjct: 411 ASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGT 470
Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
KL DF + + + I ++A L+ E+E+++ QF G
Sbjct: 471 KLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIG 507
>sp|P49358|GLYN_FLAPR Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria
pringlei PE=2 SV=1
Length = 517
Score = 275 bits (703), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 227/457 (49%), Gaps = 131/457 (28%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ L DPE+ +I+ EK RQ G+ELI SENFTSL+V++ +GS + NKYSEG PG R
Sbjct: 52 LNAPLEVGDPEIADIIELEKARQWKGLELILSENFTSLSVMQAVGSVMTNKYSEGYPGAR 111
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
YYGGN++ID E + Q+R+L+AF LD +WG NVQP SGSPANF V L
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLSGSPANFHVYTALLKAHDRIMAL 171
Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
T +D L T +
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 231
Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
+R DYAR R++CD+ +I+ ADM+HISGL+A
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291
Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
GVK V K G+++LYDYE+KIN AVFP LQGGPHNH I +A A+ QA +
Sbjct: 292 PRGAMIFFRKGVKEVNKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTA 351
Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
E+K+YQ QV +N + ++ ++K GY +V+GGT+ HL+L++L+ + GS+VE VLE + I
Sbjct: 352 EYKAYQEQVMSNCAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHI 411
Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
A NKNT + LA +I+ G
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGT 471
Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
KL DF + ++ +++ L+ ++E+Y+ QF G
Sbjct: 472 KLKDFVAAM-QSSAFQSEISKLRHDVEEYAKQFPTIG 507
>sp|Q6CLQ5|GLYM_KLULA Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=SHM1 PE=3 SV=1
Length = 498
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 203/372 (54%), Gaps = 91/372 (24%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
++ M+ + DPE+Y ++ KE+ RQ + I LI SENFTS +V++ LGS +QNKYSEG
Sbjct: 32 ANQVMVSKHVQDIDPEMYDILTKERKRQKHSITLIPSENFTSKSVMDLLGSEMQNKYSEG 91
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
PG+RYYGGNQFID E + Q+R+L+ +NLDP+ WG NVQP SG+PAN + TN+
Sbjct: 92 YPGERYYGGNQFIDMAESLCQKRALELYNLDPQLWGVNVQPLSGAPANLYAYSAVMETND 151
Query: 122 A---------------------------------------------RFDFLS-------- 128
+DFLS
Sbjct: 152 RLMGLDLPHGGHLSHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYDFLSKTSKLFRP 211
Query: 129 ----SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------------ 166
+G + YSR LDY RF++I D + + +DM+HISGL+A
Sbjct: 212 KVIVAGASAYSRVLDYKRFKEIADACGAYLMSDMAHISGLVAAGVTRSPFEYSDIVTTTT 271
Query: 167 ----------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
GV+ VTK G+++LYD +++IN +VFP QGGPHNH I A+A A+
Sbjct: 272 HKSLRGPRGAMIFYRKGVRKVTKKGKEVLYDLDKRINFSVFPGHQGGPHNHTISALAVAL 331
Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
QA + EFK YQA V NA +E++K+G+ +V+GGTD HLILI+L + G+++E +
Sbjct: 332 KQAATPEFKEYQAAVVENARIFGEELVKKGFELVSGGTDTHLILINLSNLGIDGARLETL 391
Query: 271 LEEIAIACNKNT 282
LE I IA NKNT
Sbjct: 392 LENINIAANKNT 403
>sp|Q60V73|GLYC_CAEBR Serine hydroxymethyltransferase OS=Caenorhabditis briggsae
GN=mel-32 PE=3 SV=3
Length = 511
Score = 270 bits (691), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 228/461 (49%), Gaps = 129/461 (27%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
++ +L + + DPE+++++K EK RQ G+ELIASENFTS AV++ LGS + NKYSEG
Sbjct: 47 NNENLLKDHVEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEG 106
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTN- 120
PG RYYGGN+FID++EI+ Q+R+L+ F LDP +WG NVQ SGSPANFAV + N
Sbjct: 107 YPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANG 166
Query: 121 ------------------------NARFDFL---------SSGTTCYSRCLD-------- 139
+A +F SG Y + +
Sbjct: 167 RIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPK 226
Query: 140 --------YAR------FRQICDETDSIMFADMSHISGLIA------------------- 166
YAR FR+I + + + +DM+HISGL+A
Sbjct: 227 VLIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTH 286
Query: 167 ---------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAML 211
GV+ V G + LYD EEKIN+AVFP LQGGPHNH I IA A+
Sbjct: 287 KSLRGPRGAMIFYRKGVRSVNAKGVETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALK 346
Query: 212 QAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271
Q S++F Y Q+ NA L++ + K GY + TGGTD HL+L+DLR + G++ E +L
Sbjct: 347 QCLSEDFVQYGEQILKNAKTLAERLKKHGYSLATGGTDNHLLLVDLRPIGVEGARAEHIL 406
Query: 272 EEIAIACNKNT---------------------------------------GISLAAEIQA 292
+ IACNKNT G+ +A + A
Sbjct: 407 DLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNA 466
Query: 293 ISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
+G L DF+ NE ++VA L K +E++S +FE+PG
Sbjct: 467 EAGKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507
>sp|P50432|GLYC_CAEEL Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32
PE=1 SV=2
Length = 507
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 217/450 (48%), Gaps = 129/450 (28%)
Query: 13 QTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQ 72
+ DPE++ ++K EK RQ G+ELIASENFTS AV++ LGS + NKYSEG PG RYYGGN+
Sbjct: 54 KVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNE 113
Query: 73 FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN----------- 121
FID++E++ Q+R+L+ F LDP +WG NVQP SGSPANFAV + +N
Sbjct: 114 FIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPDGG 173
Query: 122 ---------AR--------FDFLSSGTTCYSRCLDYARFRQ------------------- 145
AR F L + +DY + Q
Sbjct: 174 HLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYAR 233
Query: 146 ---------ICDETDSIMFADMSHISGLIA------------------------------ 166
I + + + +DM+HISGL+A
Sbjct: 234 HLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALI 293
Query: 167 ----GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQ 222
GV+ G LYD EEKIN+AVFP LQGGPHNH I IA A+ Q S++F Y
Sbjct: 294 FYRKGVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYG 353
Query: 223 AQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
QV NA L++ M K GY + TGGTD HL+L+DLR + G++ E VL+ IACNKNT
Sbjct: 354 EQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNT 413
Query: 283 ---------------------------------------GISLAAEIQAISGPKLVDFQT 303
G+ +A + A +G L DF++
Sbjct: 414 CPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKS 473
Query: 304 CLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
NE K VA L K +E++S +FE+PG
Sbjct: 474 FTETNEPFKKDVADLAKRVEEFSTKFEIPG 503
>sp|Q758F0|GLYM_ASHGO Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SHM1 PE=3 SV=1
Length = 497
Score = 264 bits (675), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 200/368 (54%), Gaps = 91/368 (24%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
ML + + DPE+Y ++ KE+ RQ I LI SENFTS+AV+ LGS +QNKYSEG PG+
Sbjct: 35 MLSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQ 94
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF----AVCEKA----- 116
RYYGGNQ+ID E + Q+R+L+ + LDP +WG NVQ SG+PAN A+ E
Sbjct: 95 RYYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIMEVGDRMMG 154
Query: 117 --LP----------------------------------TNNARFDFLS------------ 128
LP T +D LS
Sbjct: 155 LDLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYDTLSETSKLFRPKVIV 214
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------------------- 166
+GT+ Y+R LDY RFR+I D + + +DM+H+SGL+A
Sbjct: 215 AGTSAYARVLDYKRFREIADACGAYLLSDMAHVSGLVAAGVHPSPFEYSDIVTTTTHKSL 274
Query: 167 ------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214
G++ VTK G +I+YD +++IN +VFP+ QGGPHNH I A+A A+ QA
Sbjct: 275 RGPRGAMIFYRKGIRKVTKKGTEIMYDLDKRINFSVFPAHQGGPHNHTISALAVALKQAA 334
Query: 215 SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274
+ EFK+YQ V NA +E+ KRG+ +V+GGTD HL+LIDL + GS++E +LE +
Sbjct: 335 TPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERL 394
Query: 275 AIACNKNT 282
IA NKNT
Sbjct: 395 NIAANKNT 402
>sp|Q10104|GLYM_SCHPO Serine hydroxymethyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=shm2 PE=3 SV=2
Length = 488
Score = 260 bits (665), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 216/420 (51%), Gaps = 105/420 (25%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
+L LA+ DP +Y +++ EK RQ I LIASENFTS AV++ LGS +QNKYSEG PG
Sbjct: 29 LLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPGA 88
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN---------------- 109
RYYGGN+FID+ E + Q R+L+AF+LD E+WG NVQP+SGSPAN
Sbjct: 89 RYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLMG 148
Query: 110 ------------FAVCEKA----------LPTN------------------NARFDFLSS 129
F+ +KA +P N R + +
Sbjct: 149 LDLPHGGHLSHGFSTPQKAISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIVA 208
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA----------------------- 166
G + Y+R +DY R R+I + ++ + DM+HISGL+A
Sbjct: 209 GASAYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLR 268
Query: 167 -----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQS 215
G + K G ILY+ E+KIN +VFP QGGPHNH I A+A A+ QA++
Sbjct: 269 GPRGAMIFYRKGTRSHDKRGNPILYELEDKINFSVFPGHQGGPHNHTITALAVALGQAKT 328
Query: 216 DEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275
EF YQ V +NA +++ I RGY +V+GGTD HL+L+DL + G++VE +LE +
Sbjct: 329 PEFYQYQKDVLSNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVN 388
Query: 276 IACNKNT-----------GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIED 324
I+ NKNT G+ L G DF+ + +++ +V +L K+I +
Sbjct: 389 ISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVV----ELIDEVVSLTKKINE 444
>sp|O13425|GLYM_CANAX Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans
GN=SHM1 PE=3 SV=1
Length = 493
Score = 258 bits (658), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 195/371 (52%), Gaps = 90/371 (24%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S+ ++ ++ DPE+ ++ +E+ RQ N I LI SENFTS AV++ LGS +QNKYSEG
Sbjct: 30 SAQALISKSVQDVDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEG 89
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF----AVCEKA- 116
PG+RYYGGN+ ID+ E + Q+R+L+AF LDP QWG NVQP SG+PAN A+ E
Sbjct: 90 YPGERYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGD 149
Query: 117 ------LP----------TNNARFDFLS-------------------------------- 128
LP T + ++S
Sbjct: 150 RIMGLDLPHGGHLSHGYQTKTTKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPK 209
Query: 129 ---SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------------- 166
+G + YSR +DY R RQ+ + + +DM+HISGL++
Sbjct: 210 VIVAGASAYSRVIDYKRMRQLSIRLGAYLLSDMAHISGLVSAVVTDSPFPYSDIVTTTTH 269
Query: 167 ---------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAML 211
G++ VT G++I Y+ E KIN VFP QGGPHNH I A+A A+
Sbjct: 270 KSLRGPRGAMIFFRKGIRKVTTKGKEIPYELERKINFLVFPGHQGGPHNHTISALAVALK 329
Query: 212 QAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271
Q E+ YQ +V +NA H +D ++ +G+ +V+ GTD HLIL+DLR + G++VE VL
Sbjct: 330 QCTEPEYVKYQQEVVSNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVL 389
Query: 272 EEIAIACNKNT 282
E IA NKNT
Sbjct: 390 ERANIAANKNT 400
>sp|Q6FUP6|GLYC_CANGA Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM2 PE=3 SV=1
Length = 469
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 222/456 (48%), Gaps = 130/456 (28%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
M+ G L++TDPE+ +IK E RQ + I+LIASENFT+ +V + LG+ L NKYSEG PG
Sbjct: 12 MVSGHLSETDPEVEQIIKDEVDRQKHSIDLIASENFTTTSVFDALGTPLCNKYSEGYPGA 71
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA--------- 116
RYYGGN+ ID IE + QQR+L+AF++ P++WG NVQ SGSPAN V +
Sbjct: 72 RYYGGNEHIDRIERLCQQRALEAFHVTPDRWGVNVQTLSGSPANLQVYQALMKPHERLMG 131
Query: 117 --LP----------TNNARFDFLSS----------------------------------- 129
LP T N + +S+
Sbjct: 132 LYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKILVA 191
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA----------------------- 166
GT+ Y R +DY R R+I D+ + + DM+HISGL+A
Sbjct: 192 GTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLR 251
Query: 167 -----------GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214
G++ V KTG++I YD E IN +VFP QGGPHNH I A+ATA+ QA
Sbjct: 252 GPRGAMIFFRRGIRSVNQKTGKEIPYDLENPINFSVFPGHQGGPHNHTIAALATALKQAA 311
Query: 215 SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274
+ EFK YQ QV NA L +E GY +V+ GTD H++L+ LR+ + G++VE V E+I
Sbjct: 312 TPEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKI 371
Query: 275 AIACNKNT-----------GISLAAEIQAISGPKLVDFQTCLH----------------- 306
IA NKN+ G+ + A G DF +
Sbjct: 372 NIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLP 431
Query: 307 -----------KNEDIVKKVAALKKEIEDYSNQFEM 331
K ++I ++A LKKEI D++ ++ +
Sbjct: 432 KEANKLKDFKAKVDEIADQLAPLKKEIYDWTAEYPL 467
>sp|P37291|GLYC_YEAST Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SHM2 PE=1
SV=2
Length = 469
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 193/363 (53%), Gaps = 91/363 (25%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L TDPE+ S+IK E RQ + I+LIASENFTS +V + LG+ L NKYSEG PG RYYGG
Sbjct: 17 LVDTDPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPGARYYGG 76
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-----------LP- 118
N+ ID +EI+ QQR+LKAF++ P++WG NVQ SGSPAN V + LP
Sbjct: 77 NEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLYLPD 136
Query: 119 ---------TNNARFDFLSS-----------------------------------GTTCY 134
T N + +S+ GT+ Y
Sbjct: 137 GGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLVAGTSAY 196
Query: 135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------------------------- 166
R +DY R R+I D+ + + DM+HISGLIA
Sbjct: 197 CRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGA 256
Query: 167 ------GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFK 219
GV+ + KTG+++LYD E IN +VFP QGGPHNH I A+ATA+ QA + EFK
Sbjct: 257 MIFFRRGVRSINPKTGKEVLYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFK 316
Query: 220 SYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279
YQ QV NA L E GY +V+ GTD H++L+ LR+ + G++VE + E+I IA N
Sbjct: 317 EYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALN 376
Query: 280 KNT 282
KN+
Sbjct: 377 KNS 379
>sp|Q54EW1|GLYC2_DICDI Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum
GN=shmt2 PE=3 SV=1
Length = 481
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 224/452 (49%), Gaps = 131/452 (28%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+++++DPE+Y L+ KEK RQ G+ELIASENFTS AV+E +GSC NKY+EGLPG RYYG
Sbjct: 33 SVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYG 92
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN--ARFDFL 127
GN+ +D++E + +R+L+ FNL+PE+WG NVQPYSGS ANFA L ++ D
Sbjct: 93 GNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLDLP 152
Query: 128 SSG---------------TTCYSRCLDY-----------------ARFR----------- 144
S G T+ + + Y A FR
Sbjct: 153 SGGHLTHGYQTDKKKISATSIFFESMPYQVNETGYVDYNKMEANAALFRPKLLIAGASAY 212
Query: 145 ----------QICDETDSIMFADMSHISGLIAGVKG---------VTKTGEKILY----- 180
+I D+ + + DM+HISG++AG + VT T K L
Sbjct: 213 PREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGPRAG 272
Query: 181 -------------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
D E +IN AVFPS QGGPH + I IA A+ +A S +F+ Y
Sbjct: 273 LIFFRKTKRRDAKGNIIDDDLENRINFAVFPSCQGGPHENTIAGIAVALKEASSPDFQEY 332
Query: 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
QV+ N+ + +E+ KRGY +VT GTD HL+L DLR +TGSK+E +E I NKN
Sbjct: 333 TKQVRRNSQTMGEELKKRGYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKN 392
Query: 282 T-----------GISLAA----------------------------EIQAISGPKLVDFQ 302
G+ L A +IQ+ G K+ DFQ
Sbjct: 393 AVYGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKVGKKMPDFQ 452
Query: 303 TCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQ 334
+ N+D+ + +++E++++S +F MPG+
Sbjct: 453 RAIADNQDLKQ----IRQEVKEFSTKFGMPGE 480
>sp|Q54Z26|GLYC1_DICDI Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum
GN=shmt1 PE=1 SV=1
Length = 457
Score = 251 bits (640), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 214/451 (47%), Gaps = 132/451 (29%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L + D E++ L+ +EK RQ G+ELIASENFTS AV+E LGS NKY+EG PG RYYGG
Sbjct: 10 LKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGG 69
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN--ARFDFLS 128
+ +DE+E + Q+R+LKAF LD +WG NVQPYSGSPANFAV L ++ D S
Sbjct: 70 TEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPS 129
Query: 129 SGTTCYSR-------------------------CLDYARF-------------------- 143
G + +DY R
Sbjct: 130 GGHLTHGYQTDKKKISASSIFFESMPYQIGADGLIDYQRLEENALLFKPKLIISGASAYP 189
Query: 144 --------RQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKIL------- 179
R I D+ + + DM+H SGL+A VT T K L
Sbjct: 190 REWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGPRSGI 249
Query: 180 ------------------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
YD E KIN AVFPSLQGGPH + I +A A+ +A S EFK Y
Sbjct: 250 IFFRRGKRVDGNGKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEADSQEFKEY 309
Query: 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
QVK NA+ + + ++ +GY +VT GTD HLIL DLR +LTG+K E + I NKN
Sbjct: 310 ALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKN 369
Query: 282 TG---------------------------------------ISLAAEIQAISGPKLVDFQ 302
+S++ EIQ G KLVDF
Sbjct: 370 AVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRVGKKLVDFV 429
Query: 303 TCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
++K+++++ L+KE+E++S++F +PG
Sbjct: 430 VEINKSKELLD----LRKEVEEFSSKFTLPG 456
>sp|O13426|GLYC_CANAL Serine hydroxymethyltransferase, cytosolic OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SHM2 PE=1 SV=4
Length = 470
Score = 249 bits (637), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 189/372 (50%), Gaps = 91/372 (24%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S + G L TDPE+ +IK E RQ + I LIASENFT+ AV + LG+ + NKYSEG
Sbjct: 9 SHRQLTEGHLKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEG 68
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA----- 116
PG RYYGGN+ ID +E++ Q+R+LKAF L P++WG NVQ SGSPAN V +
Sbjct: 69 YPGARYYGGNEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHE 128
Query: 117 ---------------------------------------LPTNNARFDFLSSGTTCYS-- 135
L T +D L Y
Sbjct: 129 RLMGLDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPK 188
Query: 136 ----------RCLDYARFRQICDETDSIMFADMSHISGLIA------------------- 166
R +DY R R+I D+ + + DM+HISGLIA
Sbjct: 189 VLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTH 248
Query: 167 ---------------GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
GV+ V KTG++ILYD E IN +VFP QGGPHNH I A+ATA+
Sbjct: 249 KSLRGPRGAMIFFRRGVRSVNPKTGQEILYDLENPINFSVFPGHQGGPHNHTIAALATAL 308
Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
QA + EFK YQ QV NA L E K+GY +V+ GTD H++L+ L+ ++ G++VE V
Sbjct: 309 KQANTPEFKEYQEQVLKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETV 368
Query: 271 LEEIAIACNKNT 282
E+I IA NKN+
Sbjct: 369 CEKINIALNKNS 380
>sp|P34898|GLYC_NEUCR Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=for PE=3 SV=2
Length = 480
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 223/461 (48%), Gaps = 137/461 (29%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
ML +L ++DP++ ++KKE RQ I LIASEN TS AV + LGS + NKYSEGLPG
Sbjct: 13 MLEHSLVESDPQVAEIMKKEVQRQRESIILIASENVTSRAVFDALGSPMSNKYSEGLPGA 72
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFD 125
RYYGGNQ IDEIE++ Q R+L+AF+LDP+QWG NVQ SGSPAN V + +P +
Sbjct: 73 RYYGGNQHIDEIEVLCQNRALEAFHLDPKQWGVNVQCLSGSPANLQVYQAIMPVHGRLMG 132
Query: 126 F-------LSSG----------------TTCYSRCLD----------------------- 139
LS G T Y +D
Sbjct: 133 LDLPHGGHLSHGYQTPQRKISAVSTYFETMPYRVNIDTGLIDYDTLEKNAQLFRPKVLVA 192
Query: 140 ----YAR---FRQICDETDSI---MFADMSHISGLIA----------------------- 166
Y R + ++ DS+ + DM+HISGLIA
Sbjct: 193 GTSAYCRLIDYERMRKIADSVGAYLVVDMAHISGLIASEVIPSPFLYADVVTTTTHKSLR 252
Query: 167 -----------GVKGV-TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214
GV+ V KTG++ LYD E+KIN +VFP QGGPHNH I A+A A+ QA
Sbjct: 253 GPRGAMIFFRRGVRSVDAKTGKETLYDLEDKINFSVFPGHQGGPHNHTITALAVALKQAA 312
Query: 215 SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274
S EFK YQ +V ANA L ++ + GY +V+ GTD H++L+DLR + G++VE +LE+I
Sbjct: 313 SPEFKEYQQKVVANAKALEKKLKELGYKLVSDGTDSHMVLVDLRPIGVDGARVEFLLEQI 372
Query: 275 AIACNKNT---------------------------------------GISLAAEIQAISG 295
I CNKN + L EIQA S
Sbjct: 373 NITCNKNAVPGDKSALTPGGLRIGTPAMTSRGFGEADFEKVAVFVDEAVKLCKEIQA-SL 431
Query: 296 PKLV----DFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMP 332
PK DF+ + ++ + ++ LK+EI +SN F +P
Sbjct: 432 PKEANKQKDFKAKIATSD--IPRINELKQEIAAWSNTFPLP 470
>sp|O13972|GLYD_SCHPO Probable serine hydroxymethyltransferase, cytosolic
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC24C9.12c PE=3 SV=1
Length = 467
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 204/430 (47%), Gaps = 101/430 (23%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S+ +++ L + DP + +++ E RQ + + LIASENFTS AV++ LGS + NKYSEG
Sbjct: 3 SNDSIMLTPLKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEG 62
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
PG RYYGGN+FID+IE + Q+R+L AFNLDP +WG NVQ SGSPAN V + +P +
Sbjct: 63 YPGARYYGGNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHG 122
Query: 122 AR--FDFLSSG---------------TTCYSRCLDY------------------------ 140
D S G + Y + Y
Sbjct: 123 RLMGLDLPSGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPK 182
Query: 141 ---------------ARFRQICDETDSIMFADMSHISGLIA------------------- 166
AR RQI D ++ + DM+HISGL++
Sbjct: 183 ILVAGTSAYCRLIDYARMRQIADSVNAYLVVDMAHISGLVSAGVIPSPFEYADVVTTTTH 242
Query: 167 ---------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAML 211
G++ K G I YD E+KIN +VFP QGGPHNH I A+A A+
Sbjct: 243 KSLRGPRGAMIFFRRGLRKHDKKGNPIYYDLEDKINFSVFPGHQGGPHNHTITALAVALK 302
Query: 212 QAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271
Q Q +K YQAQV NA +E KRGY + GTD H++L+D++ + G++ E VL
Sbjct: 303 QCQEPAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVL 362
Query: 272 EEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKK 320
E I I NKNT GI + G K DF + + + A L+K
Sbjct: 363 ELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQK 422
Query: 321 EIEDYSNQFE 330
E+ +N+ +
Sbjct: 423 ELPKDANKLK 432
>sp|Q6FQ44|GLYM_CANGA Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SHM1 PE=3 SV=1
Length = 485
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 213/424 (50%), Gaps = 103/424 (24%)
Query: 1 MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
+S ++ + + DPE++ ++ E+ RQ + + LI SENFTS AV++ LGS +QNKYSE
Sbjct: 17 LSQQQLISKHVQEVDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSE 76
Query: 61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF----AVCEKA 116
G PG+RYYGGNQFID+ E + Q R+L + LDPE+WG NVQ SG+PAN AV E
Sbjct: 77 GYPGERYYGGNQFIDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVG 136
Query: 117 -------------------LPTN------NARFDFLSSGTTCYSRCLDY----------- 140
LP+ + F+ + + +DY
Sbjct: 137 DRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFR 196
Query: 141 -----------------ARFRQICDETDSIMFADMSHISGLIA----------------- 166
ARFR+I D + + +DM+HISGL+A
Sbjct: 197 PKVIVAGTSAYSRKLDYARFRKIADGCGAYLLSDMAHISGLVAANVIDSPFEHSDIVTTT 256
Query: 167 -----------------GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIAT 208
G+K V KTG++ + +++ IN +VFP QGGPHNH I A+A
Sbjct: 257 THKSLRGPRGAMIFYRKGIKKVNKKTGKETPFTFDKTINFSVFPGHQGGPHNHTISALAV 316
Query: 209 AMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVE 268
A+ QA++ EF YQ QV +NA DE++KRG+ +V+GGTD HL+L++L + G+++E
Sbjct: 317 ALKQAKTPEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLE 376
Query: 269 LVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAA 317
+LE+I IA NKNT G+ + G + DF+ ++ VK A
Sbjct: 377 AILEKINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIA 436
Query: 318 LKKE 321
LK +
Sbjct: 437 LKSQ 440
>sp|O62585|GLYC_ENCCU Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=SHMT-1 PE=3 SV=2
Length = 460
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 179/359 (49%), Gaps = 88/359 (24%)
Query: 9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYY 68
G L DPEL++LI E RQ I LIASEN+ + +E GS L NKYSEG G+RYY
Sbjct: 12 GPLEMADPELHALICGEVERQKKTINLIASENYAHQSAMEACGSVLTNKYSEGRVGERYY 71
Query: 69 GGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------- 119
GG ++D IE++ Q+R+L+ F LDP+ WG NVQPYSGSPANFA+ +P
Sbjct: 72 GGTHWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPGGRIMGLDL 131
Query: 120 --------------------------------NNARFDF--------------LSSGTTC 133
+N D+ L G +
Sbjct: 132 PSGGHLTHGYKTKTRKISASSVYFDSRPYTVGSNGLIDYEGLEKTFTDFLPHILICGYSA 191
Query: 134 YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------------------GVKG--- 170
YSR +DY R + I + +FAD+SHIS L+A G++G
Sbjct: 192 YSRDIDYKRLQSIAGRNGAFLFADISHISPLVASGLMNSPFEHCDIVMTTTQKGLRGPRG 251
Query: 171 --------VTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQ 222
VTK GE + D + +IN AVFP LQGGPHNH I IA+A+L A + EF Y
Sbjct: 252 ALIFYRRAVTKNGETV--DLDARINFAVFPMLQGGPHNHTIAGIASALLHAGTPEFAEYT 309
Query: 223 AQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
+V N+ L + G ++TGGTD H++L+DLR + G+ VE + + + I+ N+N
Sbjct: 310 RRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRN 368
>sp|Q6AM21|GLYA_DESPS Serine hydroxymethyltransferase OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=glyA PE=3 SV=1
Length = 425
Score = 224 bits (572), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 183/342 (53%), Gaps = 74/342 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L Q DPE++SLI++E+ RQ N I LIASEN+ S AVLE GS L NKYSEG PGKRYY G
Sbjct: 13 LQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEG 72
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV-----------CEKALP- 118
Q ID+IE +A R+ F + NVQPYSGSPAN AV ALP
Sbjct: 73 QQLIDQIESIAIDRAKAVFGAE----HVNVQPYSGSPANMAVYLAFLKPGDTILGMALPH 128
Query: 119 ----TNNAR--------------------FDF--------------LSSGTTCYSRCLDY 140
T+ ++ D+ L +G + Y R LD+
Sbjct: 129 GGHLTHGSKVSISGKYFNAVSYALNEEGILDYEEIRNKALECKPKILIAGHSAYPRILDF 188
Query: 141 ARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY----------- 180
A+FR+I DE +++ DM+H +GL+AG VT T K L
Sbjct: 189 AKFREIADEVGALLMVDMAHFAGLVAGGVHPSPFPYADVVTTTTHKSLRGPRGAMIMCKA 248
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
+Y + I+ AVFP +QGGPH+ AIA A+ +A +D FK Y AQV NA+ L+D +I++G
Sbjct: 249 EYAKAIDKAVFPGMQGGPHDSTTAAIAVALKEASTDSFKKYTAQVVENAASLADVLIEKG 308
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+++VTGGT+ HL+LIDL +TG + L+ I N N+
Sbjct: 309 FNLVTGGTENHLMLIDLSNKNITGKQAAKALDAAGIVLNCNS 350
>sp|A0LV49|GLYA_ACIC1 Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1
Length = 427
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 178/353 (50%), Gaps = 75/353 (21%)
Query: 1 MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
M+SS L TDP + LI+ E+ RQ I LI SEN+ S AVLE G+ L NKYSE
Sbjct: 1 MNSSPDPLAALTATDPTIADLIRAEERRQSEKIRLIPSENYVSKAVLEATGTVLTNKYSE 60
Query: 61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA--------- 111
G P +RYY G QFID+IE +A +R+ + F +D NVQPYSGSPAN A
Sbjct: 61 GYPNRRYYEGQQFIDQIETIAIERAKQLFGVD----HANVQPYSGSPANLAIYLALLSPG 116
Query: 112 --VCEKALPT--------------------------NNARFDF--------------LSS 129
V ALP + R DF + +
Sbjct: 117 DTVMGMALPMGGHLTHGWPVSATGIWFRSVQYGVRRDTGRIDFDEVREVARRERPKVIFA 176
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY 180
G T R +D+A F +I E ++++ AD++HISGL+AG ++ T K L
Sbjct: 177 GGTAIPRIIDFAAFAEIAREVNAVLVADIAHISGLVAGGVHPSPVGHADIISTTTHKTLR 236
Query: 181 -----------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA 229
Y + ++ AVFP LQGGPHNH AIA A+L+A EF+ Y + ANA
Sbjct: 237 GPRGAMLMSTEQYAKALDKAVFPGLQGGPHNHTTAAIAVALLEAMQPEFRDYARNIVANA 296
Query: 230 SHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+ L++E++ RG+ +V+GGTD HLIL+DL + G V L+ I N NT
Sbjct: 297 AVLAEELLARGFDLVSGGTDNHLILVDLTSKGVAGKPVARALDRAGIELNYNT 349
>sp|B2A3H6|GLYA_NATTJ Serine hydroxymethyltransferase OS=Natranaerobius thermophilus
(strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA
PE=3 SV=1
Length = 412
Score = 222 bits (565), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 182/342 (53%), Gaps = 75/342 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+ +TDP ++S I++E RQ GIELIASENF S AV+E GS L NKY+EG PG+RYYGG
Sbjct: 4 VKKTDPTIFSWIEEEWKRQEEGIELIASENFASRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
QF+D++E +A R + FN D NVQP+SG+ AN V AL
Sbjct: 64 CQFVDKVEELAISRVKELFNAD----HANVQPHSGASANMGVYLAALKPGDTVLGMSLDH 119
Query: 118 --------PTN----------------NARFDF--------------LSSGTTCYSRCLD 139
P N + DF + +G + Y R +D
Sbjct: 120 GGHLTHGSPVNISGKYFNFHHYGILEDTGKIDFDKVRELAKEHKPKMIVAGASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+A FR+I DE + + DM+HI+GL+A VT T K L
Sbjct: 180 FATFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGVVLCK 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
+Y+++I+ A+FP LQGGP H I + A + +A S EFK+YQ QV NAS L+DE+
Sbjct: 240 EEYKKEIDKAMFPGLQGGPLMHVIASKAVSFQEALSSEFKNYQKQVIKNASVLADELNNL 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
GY +V GG+D HL+L+DL+K +TG K E VL+++ I NKN
Sbjct: 300 GYDLVAGGSDNHLMLVDLQKKGVTGKKAERVLDDVHITVNKN 341
>sp|O66776|GLYA_AQUAE Serine hydroxymethyltransferase OS=Aquifex aeolicus (strain VF5)
GN=glyA PE=3 SV=1
Length = 428
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 177/342 (51%), Gaps = 75/342 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L +TDPE++ + KE RQ +E+IASENFTSLAV+E GS L NKY+EGLPGKRYYGG
Sbjct: 4 LLKTDPEVFDAVVKEYERQFYNLEMIASENFTSLAVMEATGSVLTNKYAEGLPGKRYYGG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-P----------- 118
+++D +E +A +R+ K F + NVQP+SGS AN AV L P
Sbjct: 64 CEYVDVVENLAIERAKKLFGAE----HANVQPHSGSQANMAVYFAVLNPGDTIMGMDLAH 119
Query: 119 ----TNNARFDF-----------------------------------LSSGTTCYSRCLD 139
T+ A+ +F + G + Y R D
Sbjct: 120 GGHLTHGAKVNFSGKLYNVIHYGVNPETELIDYDQLYKLAKEHKPKLIVGGASAYPRVFD 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+A+ R+I DE ++ DM+H +GLIAG + VT T K L
Sbjct: 180 WAKMREIADEVGALFMVDMAHYAGLIAGGVYPNPVPYAQFVTSTTHKTLRGPRSGFILTT 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
+Y + ++ +VFP +QGGP H I A A A +A S+EFK Y QV NA L++E+ K
Sbjct: 240 KEYAKAVDKSVFPGIQGGPLMHVIAAKAVAFKEAMSEEFKEYAKQVVENARVLAEELKKY 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
G+ +VTGGTD H++L+DLR + G E LE+ I NKN
Sbjct: 300 GFKIVTGGTDSHIVLVDLRNKNIIGKDAEKALEKAGITVNKN 341
>sp|B9MR57|GLYA_CALBD Serine hydroxymethyltransferase OS=Caldicellulosiruptor bescii
(strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=glyA PE=3
SV=1
Length = 415
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 178/346 (51%), Gaps = 75/346 (21%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
+ + TDPE+ IK E RQ N IELIASENF S+AV+ +GS L NKY+EG PGKR
Sbjct: 3 FYNLVKNTDPEIAEAIKSELKRQQNKIELIASENFVSIAVMAAMGSPLTNKYAEGYPGKR 62
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
YYGG ++ID +E +A +R+ K F + NVQP+SG+ AN AV L
Sbjct: 63 YYGGCEYIDVVESIAIERAKKLFGAE----HANVQPHSGAQANMAVYFAVLNPGDTILGM 118
Query: 118 ------------PTNNA------------------------------RFDFLSSGTTCYS 135
P N + R + +G + Y
Sbjct: 119 NLSHGGHLTHGSPVNFSGKLYNIISYGVDPETETINYDEVLKLAKEHRPKLILAGASAYP 178
Query: 136 RCLDYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY------ 180
R +D+ +FR+I DE + + DM+HI+GL+A VT T K L
Sbjct: 179 RVIDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPVEYADFVTTTTHKTLRGPRGGL 238
Query: 181 -----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE 235
Y + I+ ++FP +QGGP H I A A A+ +A ++EFK+YQ Q+ NA LS
Sbjct: 239 ILCKEKYAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFKNYQVQILKNAKALSTR 298
Query: 236 MIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
+I+RG+ +V+GGTD HL+L+DLR +TG E +L+E I CNKN
Sbjct: 299 LIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKN 344
>sp|Q5FNK4|GLYA_GLUOX Serine hydroxymethyltransferase OS=Gluconobacter oxydans (strain
621H) GN=glyA PE=3 SV=1
Length = 434
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 179/355 (50%), Gaps = 79/355 (22%)
Query: 2 SSSTM---LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKY 58
S ST+ H L + D E+ +++ +E RQ +GIELIASEN S AV+E GS L NKY
Sbjct: 6 SQSTLNRFFHAPLKEVDAEVATILNEELTRQQDGIELIASENMASFAVMEAQGSVLTNKY 65
Query: 59 SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA------- 111
+EGLPGKRYYGG +D +E +A R K F + NVQP+SG+ AN A
Sbjct: 66 AEGLPGKRYYGGCVDVDRVENLAIDRLKKIFGAE----FANVQPHSGANANQAAFMALAK 121
Query: 112 ---------------VCEKALPTNNARF-----------------------------DFL 127
+ A P + ++ +
Sbjct: 122 PGDTVLGLSLAAGGHLTHGAAPNYSGKWFNSVQYGVRAEDGLIDYDQMEALAREHKPKII 181
Query: 128 SSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKI 178
+G++ Y R +D+ARFR+I DE + + DM+H +GL+A T T K
Sbjct: 182 VAGSSAYPRVIDFARFRKIADEVGAYLMVDMAHFAGLVAAGLYPNPVPMADITTSTTHKT 241
Query: 179 LY------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
L D +K+N+AVFP LQGGP H I A A +A SDEFK+YQ +V
Sbjct: 242 LRGPRGGIILTNNPDLAKKVNSAVFPGLQGGPLMHVIAGKAVAFGEALSDEFKAYQKRVL 301
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
ANA L+DE+ RG+ +VTGGTD HLIL+DLR K+TG E +LE I NKN
Sbjct: 302 ANARALADELQNRGFDIVTGGTDSHLILVDLRPKKVTGKLAEAILERAGITANKN 356
>sp|A9WI58|GLYA_CHLAA Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain
ATCC 29366 / DSM 635 / J-10-fl) GN=glyA PE=3 SV=1
Length = 419
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 180/342 (52%), Gaps = 75/342 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L TDP + LI++E RQ G+ELIASEN+TSLAV+E GS L NKY+EGLPG+RYYGG
Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGG 64
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
+F+D IE +A +R+ + F NVQP+SG+ AN AV L
Sbjct: 65 CEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDH 120
Query: 118 --------PTN------NARF------------------------DFLSSGTTCYSRCLD 139
P N N F ++SG + Y R +D
Sbjct: 121 GGHLTHGSPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKLITSGVSAYPRIID 180
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+AR RQI DE +++ AD++HI+GL+A +T T K L
Sbjct: 181 FARMRQIADEVGALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMG 240
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
D+ +++N++VFP QGGP H I A A +A EF+ Y AQ++ NA L++ ++ +
Sbjct: 241 DDFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQ 300
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
G +V+GGTD HL+L+DLR LTG++ + L++ AI NKN
Sbjct: 301 GLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKN 342
>sp|B9LKK8|GLYA_CHLSY Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain
ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1
Length = 419
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 180/342 (52%), Gaps = 75/342 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L TDP + LI++E RQ G+ELIASEN+TSLAV+E GS L NKY+EGLPG+RYYGG
Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGG 64
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
+F+D IE +A +R+ + F NVQP+SG+ AN AV L
Sbjct: 65 CEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDH 120
Query: 118 --------PTN------NARF------------------------DFLSSGTTCYSRCLD 139
P N N F ++SG + Y R +D
Sbjct: 121 GGHLTHGSPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKLITSGASAYPRIID 180
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+AR RQI DE +++ AD++HI+GL+A +T T K L
Sbjct: 181 FARMRQIADEVGALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMG 240
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
D+ +++N++VFP QGGP H I A A +A EF+ Y AQ++ NA L++ ++ +
Sbjct: 241 DDFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQ 300
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
G +V+GGTD HL+L+DLR LTG++ + L++ AI NKN
Sbjct: 301 GLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKN 342
>sp|Q3AW18|GLYA_SYNS9 Serine hydroxymethyltransferase OS=Synechococcus sp. (strain
CC9902) GN=glyA PE=3 SV=1
Length = 429
Score = 215 bits (547), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 181/352 (51%), Gaps = 76/352 (21%)
Query: 3 SSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGL 62
S ++ LA DPE+ LI +E+HRQ +ELIASENF S AV++ GS L NKY+EGL
Sbjct: 5 SERAINAGLASADPEISRLIDQERHRQETHLELIASENFASQAVMQAQGSVLTNKYAEGL 64
Query: 63 PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----- 117
P KRYYGG + +D IE +A +R+ + F+ W NVQP+SG+ ANFAV L
Sbjct: 65 PAKRYYGGCEHVDAIETLAIERAKQLFD---AAW-ANVQPHSGAQANFAVFLALLKPGDT 120
Query: 118 ----------------PTN----------------NARFD--------------FLSSGT 131
P N R D + G
Sbjct: 121 IMGLDLSHGGHLTHGSPVNVSGKWFNVVQYGVDPTTQRLDMEAIRKLALEHKPKLIVCGY 180
Query: 132 TCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GVKG--------VTKTGEKILY-- 180
+ Y R +D+A FR I DE + + ADM+HI+GL+A GV VT T K L
Sbjct: 181 SAYPRTIDFAAFRSIADEVGAFLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTLRGP 240
Query: 181 ----------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANAS 230
++ +K + AVFP QGGP H I A A A +A FK+Y QV ANA
Sbjct: 241 RGGLILCRDAEFAKKFDKAVFPGTQGGPLEHVIAAKAVAFGEALQPSFKTYSQQVVANAG 300
Query: 231 HLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
L++++I RG +VV+GGTD H++L+DLR +TG +L++ ++ I NKNT
Sbjct: 301 ALAEQLISRGINVVSGGTDNHVVLLDLRSIGMTGKVADLLVSDVHITANKNT 352
>sp|A4J9B1|GLYA_DESRM Serine hydroxymethyltransferase OS=Desulfotomaculum reducens
(strain MI-1) GN=glyA PE=3 SV=1
Length = 413
Score = 214 bits (546), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 179/347 (51%), Gaps = 75/347 (21%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
M +G LAQTDPEL I+ E RQ IELIASENF S AVLE GS L NKY+EG PGK
Sbjct: 1 MFNGKLAQTDPELAKAIELEHQRQQRNIELIASENFVSPAVLEAQGSILTNKYAEGYPGK 60
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV-------CEKALP 118
RYYGG +F+D E +A R+ K F D NVQP+SG+ ANFAV +K L
Sbjct: 61 RYYGGCEFVDIAESLAISRAKKLFGAD----HANVQPHSGAQANFAVYFALLQPGDKILG 116
Query: 119 TNNARFDFLS--------------------------------------------SGTTCY 134
N A L+ +G + Y
Sbjct: 117 MNLAHGGHLTHGSPVNVSGKYFNVVAYGVEEDTGCINYEKLREIALQEKPKMIVAGASAY 176
Query: 135 SRCLDYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY----- 180
+R +D+ + +I E D+ F DM+HI+GL+A VT T K L
Sbjct: 177 ARAIDFKKIGEIAKEIDAYFFVDMAHIAGLVAAGLHQSPVPYADVVTTTTHKTLRGPRGG 236
Query: 181 ------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSD 234
+Y + I+ A+FP QGGP H I A A A +A EFK+YQ Q+ NA L+
Sbjct: 237 MILCKEEYAQLIDKAIFPGSQGGPLMHVIAAKAAAFGEALKPEFKAYQQQIINNAQALAK 296
Query: 235 EMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
+++RG+++V+GGTD HLIL+DLR +TG + E +L+E+ I CNKN
Sbjct: 297 GLLERGFNLVSGGTDNHLILVDLRGTGITGKQAETLLDEVHITCNKN 343
>sp|A4XL61|GLYA_CALS8 Serine hydroxymethyltransferase OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glyA
PE=3 SV=1
Length = 417
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 177/346 (51%), Gaps = 75/346 (21%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
+ + TDPE+ IK E RQ N IELIASENF S+AV+ +GS L NKY+EG P KR
Sbjct: 5 FYNLVKDTDPEIAEAIKNELKRQQNKIELIASENFVSIAVMAAMGSPLTNKYAEGYPNKR 64
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
YYGG ++ID +E +A +R+ K F + NVQP+SG+ AN AV L
Sbjct: 65 YYGGCEYIDVVESIAIERAKKLFGAE----HANVQPHSGAQANMAVYFAVLNPGDTILGM 120
Query: 118 ------------PTNNA------------------------------RFDFLSSGTTCYS 135
P N + R + +G + Y
Sbjct: 121 NLSHGGHLTHGSPVNFSGKLYNIVSYGVDPETETIDYDEVLRLAKEHRPKLILAGASAYP 180
Query: 136 RCLDYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY------ 180
R +D+ +FR+I DE + + DM+HI+GL+A VT T K L
Sbjct: 181 RIIDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPVEYADFVTTTTHKTLRGPRGGL 240
Query: 181 -----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE 235
Y + I+ ++FP +QGGP H I A A A+ +A ++EF++YQ Q+ NA LS+
Sbjct: 241 ILCKEKYAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFRNYQIQILKNAKALSER 300
Query: 236 MIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
+I+RG+ +V+GGTD HL+L+DLR +TG E L+ + I CNKN
Sbjct: 301 LIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKRLDSLNITCNKN 346
>sp|A1B0I7|GLYA_PARDP Serine hydroxymethyltransferase OS=Paracoccus denitrificans (strain
Pd 1222) GN=glyA PE=3 SV=1
Length = 427
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 194/408 (47%), Gaps = 94/408 (23%)
Query: 1 MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
M+ + TL DP+++ I+KE RQ + IELIASEN S AVLE GS L NKY+E
Sbjct: 1 MTDTGFFTETLDSRDPDIFGAIRKELGRQRDEIELIASENIVSRAVLEAQGSVLTNKYAE 60
Query: 61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAVCEKAL 117
G PGKRYYGG Q++D +E +A +R+ + F GC NVQP SGS N AV L
Sbjct: 61 GYPGKRYYGGCQYVDIVEELAIERAKQLF-------GCEFANVQPNSGSQMNQAVFLALL 113
Query: 118 ---------------------PTN--NARFDFLS-------------------------- 128
P N F+ +S
Sbjct: 114 QPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVRQQDQLLDMDEIRKKAHEHKPKL 173
Query: 129 --SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG---------VTKTGEK 177
+G T YSR D+A FR+I DE + + DM+HI+GL+AG + VT T K
Sbjct: 174 ILAGGTAYSRVWDWAEFRKIADEVGAWLMVDMAHIAGLVAGGQHPSPLPNAHVVTTTTHK 233
Query: 178 ILY------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
L D +KIN+AVFP LQGGP H I A A A +A +FK Y AQV
Sbjct: 234 SLRGPRGGMVLTNDADIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPDFKDYAAQV 293
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN---- 281
ANA ++DE++K G +V+GGTD HL L DLR +TG E L I CNKN
Sbjct: 294 VANARAMADELMKGGIDIVSGGTDNHLCLADLRPKGVTGKATEAALGRAHITCNKNGVPF 353
Query: 282 --------TGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKE 321
+GI L A G K +F+ ++V +AA +E
Sbjct: 354 DPEKPFVTSGIRLGAPAGTTRGFKEDEFRQIARWIVEVVDGLAANGEE 401
>sp|Q97GV1|GLYA_CLOAB Serine hydroxymethyltransferase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=glyA PE=3 SV=1
Length = 411
Score = 211 bits (538), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 174/340 (51%), Gaps = 75/340 (22%)
Query: 14 TDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQF 73
+D E+YS+I++E RQ N IELIASENFTS AV+E +GS L NKY+EG PGKRYYGG
Sbjct: 9 SDSEVYSIIEEENARQENNIELIASENFTSKAVMEAMGSYLTNKYAEGYPGKRYYGGCYV 68
Query: 74 IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---------------- 117
+D++E +A++R+ K F + NVQP+SGS AN AV L
Sbjct: 69 VDKVEELARERAKKLFKAE----HANVQPHSGSQANMAVYFAVLKPGDTIMGMNLTDGGH 124
Query: 118 -----PTN----------------NARFDF--------------LSSGTTCYSRCLDYAR 142
P N + D+ + SG + YSR +D+ +
Sbjct: 125 LTHGSPVNFSGKLFNIIAYGVSDETEQIDYEAFRKKALECKPKMIVSGASAYSRIIDFKK 184
Query: 143 FRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY-----------DY 182
R+ICDE + M DM+HI+GL+A VT T K L Y
Sbjct: 185 IREICDEVGAYMMVDMAHIAGLVAAGLHPSPIPYADFVTTTTHKTLRGPRGGAIFCKEKY 244
Query: 183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH 242
+ I+ +VFP +QGGP H I A +A D+FK Y Q+ NA +DE+ K G+
Sbjct: 245 AKDIDKSVFPGMQGGPLMHIIAGKAVCFGEALKDDFKDYAQQIVNNAKVFADELTKYGFR 304
Query: 243 VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+V+GGTD HL+L+DL +TG E +L+ + I NKNT
Sbjct: 305 IVSGGTDNHLLLVDLTNKNITGKDAEHLLDSVGITANKNT 344
>sp|B9KAQ7|GLYA_THENN Serine hydroxymethyltransferase OS=Thermotoga neapolitana (strain
ATCC 49049 / DSM 4359 / NS-E) GN=glyA PE=3 SV=1
Length = 427
Score = 211 bits (538), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 170/344 (49%), Gaps = 76/344 (22%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+ + DPE+Y ++ E RQ G+ELIASENF SLAV+E +GS L NKY+EG PG+RYYGG
Sbjct: 5 VKKVDPEIYEVLVNELRRQEYGLELIASENFASLAVIETMGSVLTNKYAEGYPGRRYYGG 64
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV------------------ 112
+++D E +A +R+ K F + NVQP+SGS AN AV
Sbjct: 65 CEWVDRAEELAIERAKKLFGAE----FANVQPHSGSQANMAVYLALAQPGDTIMGMSLSH 120
Query: 113 ---CEKALPTNNA------------------------------RFDFLSSGTTCYSRCLD 139
P N + R + +G + Y+R +D
Sbjct: 121 GGHLTHGAPVNFSGRIFKVVHYGVNLETETIDYDEVRKLALEHRPKIIVAGGSAYARTID 180
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+ RFR+I DE + + DM+H +GL+A VT T K L
Sbjct: 181 FKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPVEYAHVVTSTTHKTLRGPRGGLILTN 240
Query: 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
+ + ++ +FP +QGGP H I A A +A S+EF+ YQ QV NA +++EM K
Sbjct: 241 DPEIAKAVDKTIFPGIQGGPLMHVIAAKAVCFKEAMSEEFREYQKQVVKNAKKMAEEMKK 300
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
RGY +V+GGTD HL L+DL +TG E LE I NKNT
Sbjct: 301 RGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNT 344
>sp|Q92QU6|GLYA1_RHIME Serine hydroxymethyltransferase 1 OS=Rhizobium meliloti (strain
1021) GN=glyA1 PE=3 SV=1
Length = 431
Score = 211 bits (537), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 193/402 (48%), Gaps = 91/402 (22%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+LA +DPE++ I+KE RQ + IELIASEN S AVLE GS + NKY+EG PGKRYYG
Sbjct: 13 SLADSDPEIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYG 72
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------ 117
G Q++D E +A +R+ K F ++ NVQP SGS N AV L
Sbjct: 73 GCQYVDIAEALAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLN 128
Query: 118 ---------PTN--NARFDFLS----------------------------SGTTCYSRCL 138
P N F+ +S +G T YSR
Sbjct: 129 SGGHLTHGSPVNMSGKWFNVVSYGVREDDHLLDMDEVARKAREQKPKLIIAGGTAYSRIW 188
Query: 139 DYARFRQICDETDSIMFADMSHISGLIAGVK----------GVTKT--------GEKILY 180
D+ RFR+I DE + + DM+HI+GL+AG + T T G IL
Sbjct: 189 DWKRFREIADEVGAWLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILT 248
Query: 181 DYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237
+ EE KIN+AVFP LQGGP H I A A A+ +A FK Y AQV NA L++ +
Sbjct: 249 NDEEIAKKINSAVFPGLQGGPLMHVIAAKAVALGEALQPSFKDYAAQVVKNARTLAETLK 308
Query: 238 KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN------------TGIS 285
G +V+GGTD HL+L+DLRK TG + E L + CNKN +G+
Sbjct: 309 ANGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPFVTSGVR 368
Query: 286 LAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSN 327
L A G K +F+ E IV+ + LK D N
Sbjct: 369 LGAPAGTTRGFKEAEFKEV---GELIVEVLDGLKAANSDEGN 407
>sp|B9JV74|GLYA_AGRVS Serine hydroxymethyltransferase OS=Agrobacterium vitis (strain S4 /
ATCC BAA-846) GN=glyA PE=3 SV=1
Length = 429
Score = 211 bits (536), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 176/351 (50%), Gaps = 77/351 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
LA+TDP+++ I+KE RQ + IELIASEN S AVLE GS + NKY+EG PGKRYYGG
Sbjct: 12 LAETDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGG 71
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
QF+D E +A +R+ K F ++ NVQP SGS N AV L
Sbjct: 72 CQFVDIAEELAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNS 127
Query: 118 --------PTN--NARFDFLS----------------------------SGTTCYSRCLD 139
P N F+ +S +G T YSR D
Sbjct: 128 GGHLTHGSPVNMSGKWFNVVSYGVRQDDNLLDMDAVAESARKHKPKLIIAGGTAYSRIWD 187
Query: 140 YARFRQICDETDSIMFADMSHISGLIAGVKG---------VTKTGEKILY---------- 180
+ RFR+I DE + + DM+HI+GL+AG + T T K L
Sbjct: 188 WKRFREIADEVGAYLMVDMAHIAGLVAGNQHPSPFPHCHVATTTTHKSLRGPRGGMILTN 247
Query: 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
D +K N+AVFP LQGGP H I A A A +A EF+ Y AQV NA LS+ ++K
Sbjct: 248 DEDLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFQDYAAQVVKNAKALSETLVK 307
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289
G +V+GGTD HL+L+DLRK TG + E L + CNKN GI E
Sbjct: 308 GGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKN-GIPFDPE 357
>sp|Q8UG75|GLYA1_AGRT5 Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2
Length = 429
Score = 210 bits (535), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 173/351 (49%), Gaps = 77/351 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
LA+ DP+++ I+KE RQ + IELIASEN S AVLE GS + NKY+EG PGKRYYGG
Sbjct: 12 LAEVDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGG 71
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
QF+D E +A +R+ K F ++ NVQP SGS N AV L
Sbjct: 72 CQFVDIAEELAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNS 127
Query: 118 --------PTN------------------------------NARFDFLSSGTTCYSRCLD 139
P N R + +G T YSR D
Sbjct: 128 GGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVERKAKETRPKLILAGGTAYSRVWD 187
Query: 140 YARFRQICDETDSIMFADMSHISGLIAGVKG---------VTKTGEKILY---------- 180
+ RFR+I DE + + DM+HI+GL+AG + T T K L
Sbjct: 188 WKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILTN 247
Query: 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
D +K N+AVFP LQGGP H I A A A +A EFK Y AQV NA L++ +I+
Sbjct: 248 DEDLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKDYAAQVVKNAKALAETLIE 307
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289
G VV+GGTD HL+L+DLRK TG + E L I CNKN GI E
Sbjct: 308 GGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKN-GIPFDPE 357
>sp|A8MGL7|GLYA_ALKOO Serine hydroxymethyltransferase OS=Alkaliphilus oremlandii (strain
OhILAs) GN=glyA PE=3 SV=1
Length = 410
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 179/344 (52%), Gaps = 75/344 (21%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
TL DPE+Y +I+KE RQ IELIASENF + AV+E +GS L NKY+EG PGKRYYG
Sbjct: 5 TLKIADPEIYEVIQKETKRQRGNIELIASENFVTEAVMEAMGSQLTNKYAEGYPGKRYYG 64
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN----FAVCEKA--------- 116
G + +D E +A+ R K FN + NVQP+SG+ AN FA+ +
Sbjct: 65 GCEEVDVAEDLARDRLKKLFNAE----HANVQPHSGANANIGVYFAILKPGDTVLGMNLS 120
Query: 117 --------LPTN--NARFDFLS----------------------------SGTTCYSRCL 138
P N ++F+ +G + + R +
Sbjct: 121 HGGHLTHGSPVNISGTYYNFVDYGVDKETHLINYEEVRRIANEIKPKLIVAGASAFPRKI 180
Query: 139 DYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY--------- 180
D+ +FR+I DE + + DM+HI+GL+A VT T K L
Sbjct: 181 DFKKFREIADEVGAYLMVDMAHIAGLVAAGLHENPCDYADFVTTTTHKTLRGPRGGAILC 240
Query: 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
Y + I+ A+FP LQGGP H I A A + +A S EFK+YQ QV NA+ L +E+
Sbjct: 241 KEKYAKMIDKAIFPGLQGGPLMHVIAAKAVSFKEALSPEFKAYQEQVIKNAAKLGEELKS 300
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
RG+++V+GGTD HL+L+DLR +TG E +L+E+ + NKNT
Sbjct: 301 RGFNLVSGGTDNHLLLLDLRNKNITGKDAEKLLDEVGVTVNKNT 344
>sp|A6LKU9|GLYA_THEM4 Serine hydroxymethyltransferase OS=Thermosipho melanesiensis
(strain BI429 / DSM 12029) GN=glyA PE=3 SV=1
Length = 424
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 181/347 (52%), Gaps = 82/347 (23%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+ + DPE+Y +I KE RQ G+ELIASENF SLAV+E +GS L NKY+EG PG+RYYGG
Sbjct: 5 VKKVDPEIYEVILKEWDRQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGG 64
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN----FAVCEKALP-------- 118
+++D E +A+ R+ + FN+ NVQP+SGS AN FAV E
Sbjct: 65 CEWVDVAEKLARDRAKELFNVKY----ANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSH 120
Query: 119 ----TNNARFDF-----------------------------------LSSGTTCYSRCLD 139
T+ A +F + +G + YS+ +D
Sbjct: 121 GGHLTHGAPVNFSGRIYNVVSYGVDSETEVINYDEVRELALKHKPKIIIAGGSAYSKIID 180
Query: 140 YARFRQICDETDSIMFADMSHISGLIA-GV-----------------------KGVTKTG 175
+ RFR+I DE + + DM+H +GL+A G+ G+ T
Sbjct: 181 FKRFREIADEVGAYLIVDMAHFAGLVAAGIYPNPAEYAHIVTSTTHKTLRGPRGGMILTN 240
Query: 176 EKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE 235
+K LY + IN ++FP +QGGP H I A A +A +DEFK+YQ QV NA L++E
Sbjct: 241 DKELY---KAINKSIFPGIQGGPLMHVIAAKAVCFKEALTDEFKAYQNQVVKNAKKLAEE 297
Query: 236 MIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+ KRG +V+GGTD HL+L+DL +TG E+ L + + NKNT
Sbjct: 298 LEKRGLRIVSGGTDTHLMLVDLNPLNVTGKAAEIALGKCHVTVNKNT 344
>sp|A4ITJ9|GLYA_GEOTN Serine hydroxymethyltransferase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=glyA PE=3 SV=1
Length = 412
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 181/343 (52%), Gaps = 75/343 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L Q DP++++ I++E+ RQ IELIASENF S AV+E GS + NKY+EG PG+RYYGG
Sbjct: 4 LPQQDPQVFATIEQERKRQHAKIELIASENFVSRAVMEAQGSVMTNKYAEGYPGRRYYGG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
+++D +E +A++R+ + F + NVQP+SG+ AN AV L
Sbjct: 64 CEYVDVVEDLARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLKPGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLS----------------------------SGTTCYSRCLD 139
P N +++F+ +G + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVEYGVDPETHVIDYDDVREKARLHRPKLIVAGASAYPRVID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+A+FR+I DE + + DM+HI+GL+A VT T K L
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
+ ++I+ ++FP +QGGP H I A A A+ +A D+FK Y ++ NA L+ + K
Sbjct: 240 EQFAKQIDKSIFPGIQGGPLMHVIAAKAVALGEALQDDFKVYAKRIIDNAQRLAAALQKE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
G+ +V+GGTD HL+L+DLR +LTG E VL+E+ I NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342
>sp|B0TI64|GLYA_HELMI Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1
Length = 413
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 181/353 (51%), Gaps = 79/353 (22%)
Query: 1 MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
MS LH Q DPE+ + + +EK RQ N IELIASENF S AV+E GS L NKY+E
Sbjct: 1 MSEWKHLH----QVDPEVAAAMDREKKRQKNNIELIASENFVSEAVMEAAGSVLTNKYAE 56
Query: 61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--- 117
G PGKRYYGG +F+D++E +A +R+ + F + NVQP+SG+ AN V L
Sbjct: 57 GYPGKRYYGGCEFVDQVERLAIERAKRLFGAE----HANVQPHSGANANMGVYFACLEPG 112
Query: 118 ------------------PTN----------------NARFDF--------------LSS 129
P N R D+ + +
Sbjct: 113 DTVLGMNLAHGGHLTHGSPVNISGKYFRFVAYGVDAHTGRIDYDEVARIARETKPKLIVA 172
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY 180
G + Y R LD+ARFR I DE +++ DM+HI+GL+A + VT T K L
Sbjct: 173 GASAYPRVLDFARFRAIADEVGAMLMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLR 232
Query: 181 -----------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA 229
++ K++ A+FP LQGGP H I A A A +A + F +YQ Q+ ANA
Sbjct: 233 GPRGGMILCKQEWAAKVDKAIFPGLQGGPLMHIIAAKAVAFQEAMAPAFTAYQKQIAANA 292
Query: 230 SHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+ L+ + RG+ +V+GGTD HL+L+DLR +LTG + E L+E I NKN
Sbjct: 293 AALAKGLTDRGFQLVSGGTDNHLMLVDLRNKQLTGKEAEKRLDECRITVNKNA 345
>sp|Q5KUI2|GLYA_GEOKA Serine hydroxymethyltransferase OS=Geobacillus kaustophilus (strain
HTA426) GN=glyA PE=3 SV=1
Length = 412
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 180/343 (52%), Gaps = 75/343 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L Q DP++++ I++E+ RQ IELIASENF S AV+E GS L NKY+EG PG+RYYGG
Sbjct: 4 LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
+++D +E +A++R+ + F + NVQP+SG+ AN AV L
Sbjct: 64 CEYVDIVEDLARERAKQLFGAE----HVNVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTNNA------------------------------RFDFLSSGTTCYSRCLD 139
P N + R + +G + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGIQYNFVEYGVDPETHVIDYDDVREKARLHRPKLIVAGASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIA-GVKG--------VTKTGEKILY---------- 180
+A+FR+I DE + + DM+HI+GL+A GV VT T K L
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGVHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
+ ++I+ A+FP +QGGP H I A A A+ +A D+FK Y +V NA L+ +
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVALGEALQDDFKVYAKRVVENAKRLAAALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
G+ +++GGTD HL+L+DLR +LTG E VL+E+ I NKNT
Sbjct: 300 GFTLISGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342
>sp|Q1D345|GLYA_MYXXD Serine hydroxymethyltransferase OS=Myxococcus xanthus (strain DK
1622) GN=glyA PE=3 SV=1
Length = 418
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 171/343 (49%), Gaps = 75/343 (21%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
TLA+ DPE+ ++++E RQ G+ELIASENF S AV+E +GS L NKY+EG PGKRYYG
Sbjct: 6 TLAEVDPEIARVLREETQRQEEGLELIASENFVSPAVMEAVGSVLTNKYAEGYPGKRYYG 65
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN-------------------- 109
G + +D E +A R+ F D NVQ +SGS AN
Sbjct: 66 GCEVVDVAENLAIARAKDLFGAD----AVNVQAHSGSQANMGAFMALMKPGDTMLSLDLN 121
Query: 110 -----------------FAVCEKALPTNNARFDF--------------LSSGTTCYSRCL 138
+ V L + DF + G + Y R L
Sbjct: 122 SGGHLTHGATFNFSGKLYKVVHYGLTRDTETIDFAQVESLAKEHKPKVIVVGASAYPRTL 181
Query: 139 DYARFRQICDETDSIMFADMSHISGLIA-GVKG--------VTKTGEKILY--------- 180
D+A+FR+I D + M DM+HI+GL+A GV VT T K L
Sbjct: 182 DFAKFREIADAVGAAMLVDMAHIAGLVAAGVHPSPVPVADIVTSTTHKTLRGPRGGLVLS 241
Query: 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
Y + IN+ +FP +QGGP H I A A +A S EFK+YQ Q+ ANA L++ + +
Sbjct: 242 REPYAKAINSQIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQRQIVANAKALAEALQR 301
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
G + +GGTD HL+L+DLR KLTG E VL++ I NKN
Sbjct: 302 AGLRLTSGGTDNHLMLVDLRPKKLTGKVAEEVLDKAGITVNKN 344
>sp|B8E008|GLYA_DICTD Serine hydroxymethyltransferase OS=Dictyoglomus turgidum (strain
Z-1310 / DSM 6724) GN=glyA PE=3 SV=1
Length = 414
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 177/343 (51%), Gaps = 75/343 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L + DPE+Y IK E++R+ +ELIASENF S AVLE GS L NKY+EG PGKRYYGG
Sbjct: 4 LPEVDPEIYEAIKSEEYREEYHLELIASENFVSRAVLEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------EKALPTNNAR 123
++D++E +A++R + + NVQP+SGS AN AV ++ L N A
Sbjct: 64 CLYVDKVEDIARERVKAIYGAE----HANVQPHSGSQANMAVYFVVLNPGDRVLGMNLAH 119
Query: 124 ----------------FDF----------------------------LSSGTTCYSRCLD 139
++F + +G + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGKLYNFYFYGVDKNTEMINYDSVWNLAKELKPKLIVAGASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+ +F QI ++ + DM+HI+GL+A VT T K L
Sbjct: 180 FEKFAQIAEDVGAYFMVDMAHIAGLVAAGLHPSPVPYAHFVTSTTHKTLRGPRGGFILCK 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
++ ++I+ AVFP +QGGP H I A A A +A S EFK YQ Q+ NA +++E+IK
Sbjct: 240 KEFAKEIDKAVFPGIQGGPLMHVIAAKAVAFKEAMSPEFKEYQKQIVLNAKAMAEELIKL 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
GY +V+GGTD HL+L+DLR +TG + E LEE I NKN
Sbjct: 300 GYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNA 342
>sp|Q3AN03|GLYA_SYNSC Serine hydroxymethyltransferase OS=Synechococcus sp. (strain
CC9605) GN=glyA PE=3 SV=1
Length = 431
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 181/353 (51%), Gaps = 76/353 (21%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
+S + LAQ+DP++ + I +E+ RQ +ELIASENF S AV++ GS L NKY+EG
Sbjct: 4 ASGRAIDADLAQSDPDIAAFINQERQRQETHLELIASENFASRAVMQAQGSVLTNKYAEG 63
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---- 117
LP KRYYGG + +D IE +A +R+ + F W NVQP+SG+ ANFAV L
Sbjct: 64 LPSKRYYGGCEHVDAIEELAIERAKQLFG---AAW-ANVQPHSGAQANFAVFLALLQPGD 119
Query: 118 -----------------PTN----------------NARFD--------------FLSSG 130
P N R D + G
Sbjct: 120 TIMGLDLSHGGHLTHGSPVNVSGKWFNVVQYGVDKETQRLDMEAIRQLALEHKPKLIVCG 179
Query: 131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GVKG--------VTKTGEKILY- 180
+ Y R +D+A FR I DE + + ADM+HI+GL+A GV VT T K L
Sbjct: 180 YSAYPRTIDFAAFRAIADEVGAYLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTLRG 239
Query: 181 -----------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA 229
++ +K + AVFP QGGP H I A A A +A FK+Y QV ANA
Sbjct: 240 PRGGLILCRDAEFAKKFDKAVFPGSQGGPLEHVIAAKAVAFGEALQPSFKAYSQQVVANA 299
Query: 230 SHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+ L++++I RG VV+GGTD H++L+DLR +TG +L++ ++ I NKNT
Sbjct: 300 AALAEQLIARGIDVVSGGTDNHVVLLDLRSIGMTGKVADLLVSDVHITANKNT 352
>sp|D3DKC4|GLYA_HYDTT Serine hydroxymethyltransferase OS=Hydrogenobacter thermophilus
(strain DSM 6534 / IAM 12695 / TK-6) GN=glyA PE=1 SV=1
Length = 427
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 173/342 (50%), Gaps = 75/342 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L TD E+Y I KE RQ +ELIASENFTSLAV+E GS + NKY+EGLP KRYYGG
Sbjct: 4 LFNTDAEIYEAIVKEYERQFYHLELIASENFTSLAVMEAQGSVMTNKYAEGLPHKRYYGG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP------------ 118
+F+D E +A +R+ F D E NVQP+SG+ AN AV L
Sbjct: 64 CEFVDIAEDLAIERAKALF--DAEH--ANVQPHSGTQANMAVYMAVLKPGDTIMGMDLSH 119
Query: 119 ----TNNARFDF-----------------------------------LSSGTTCYSRCLD 139
T+ A+ +F + G + Y R +D
Sbjct: 120 GGHLTHGAKVNFSGKIYNAVYYGVHPETHLIDYDQLYRLAKEHKPKLIVGGASAYPRVID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+A+ R+I D + + DM+H +GLIAG VT T K L
Sbjct: 180 WAKLREIADSVGAYLMVDMAHYAGLIAGGVYPNPVPYAHFVTSTTHKTLRGPRSGFILCK 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
++ + I+ +VFP +QGGP H I A A A +A S EFK Y QV ANA L++E IK
Sbjct: 240 KEFAKDIDKSVFPGIQGGPLMHVIAAKAVAFKEAMSQEFKEYARQVVANARVLAEEFIKE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
G+ VV+GGTD H++L+DLR LTG +VE L + I NKN
Sbjct: 300 GFKVVSGGTDSHIVLLDLRDTGLTGREVEEALGKANITVNKN 341
>sp|Q2KA25|GLYA_RHIEC Serine hydroxymethyltransferase OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=glyA PE=3 SV=1
Length = 432
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 184/388 (47%), Gaps = 94/388 (24%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S+ + + +LA DPE++ I KE RQ + IELIASEN S AVLE GS + NKY+EG
Sbjct: 5 STESFFNRSLADVDPEIFGAIGKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEG 64
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---- 117
PGKRYYGG QF+D E +A +R+ K F ++ NVQP SGS N AV L
Sbjct: 65 YPGKRYYGGCQFVDIAEELAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGD 120
Query: 118 -----------------PTN--NARFDFLS----------------------------SG 130
P N F+ +S +G
Sbjct: 121 TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVARKAEEHKPKVIIAG 180
Query: 131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVK--------------------- 169
T YSR D+ RFR+I D + + DM+HI+GL+AG +
Sbjct: 181 GTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRG 240
Query: 170 ---GVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
GV T E+ D +K N+AVFP LQGGP H I A A A +A EFK Y AQ+
Sbjct: 241 PRGGVILTNEE---DLAKKFNSAVFPGLQGGPLMHIIAAKAVAFGEALQPEFKEYAAQIV 297
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN----- 281
NA L++ +I G VV+GGTD HL+L+DLRK TG + E L I CNKN
Sbjct: 298 KNARALAETLIAGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFD 357
Query: 282 -------TGISLAAEIQAISGPKLVDFQ 302
+G+ L A G K +F+
Sbjct: 358 PEKPFVTSGVRLGAPAGTTRGFKEAEFR 385
>sp|Q2RFW7|GLYA_MOOTA Serine hydroxymethyltransferase OS=Moorella thermoacetica (strain
ATCC 39073) GN=glyA PE=3 SV=1
Length = 416
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 177/343 (51%), Gaps = 75/343 (21%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
T+A+ DPE+ + ++ E RQ +ELIASENF S AV+E L NKY+EG PGKRYYG
Sbjct: 5 TVAKVDPEIVAAVRGELQRQRTHLELIASENFVSQAVMEAYSCVLTNKYAEGYPGKRYYG 64
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------EKALPTNNA 122
G ++ D +E +A++R+ F + NVQP+SGS AN AV +KAL N A
Sbjct: 65 GCEWADVVENLARERAKALFGAE----HANVQPHSGSQANTAVYLAVLNPGDKALGMNLA 120
Query: 123 ------------------------------RFDF--------------LSSGTTCYSRCL 138
R D+ + +G + Y R +
Sbjct: 121 HGGHLTHGSPVSLSGKYYNFCFYGVDAKTGRIDYDAVARIAREERPRLIVAGASAYPRVI 180
Query: 139 DYARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY--------- 180
D+ARFR+I DE +++ DM+HI+GL+A VT T K +
Sbjct: 181 DFARFREIADEVGALLMVDMAHIAGLVAAGIHPNPVPYAHFVTTTTHKTMRGPRGGIILT 240
Query: 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
+Y I+ AVFP +QGGP H I A A A+ +A EFK YQ Q+ NA L+D ++
Sbjct: 241 TREYARDIDKAVFPGVQGGPLMHVIAAKAVALKEAMLPEFKRYQEQIVTNARTLADALMG 300
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
G+++V+GGTD HL+L+DLR +TG + E +L + I NKN
Sbjct: 301 YGFNLVSGGTDNHLMLVDLRNKNITGREAEDILASVQITVNKN 343
>sp|B2V398|GLYA_CLOBA Serine hydroxymethyltransferase OS=Clostridium botulinum (strain
Alaska E43 / Type E3) GN=glyA PE=3 SV=1
Length = 411
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 176/343 (51%), Gaps = 75/343 (21%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+++ D E+Y+LI+KE RQ NGIELIASEN S AV+E +GS L NKY+EG PGKRYYGG
Sbjct: 6 ISREDNEIYALIEKELERQQNGIELIASENVASEAVMEAMGSYLTNKYAEGYPGKRYYGG 65
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
+D +E +A++R+ + F + NVQP+SGS AN AV L
Sbjct: 66 CYVVDGVEEIARERAKELFGAEH----ANVQPHSGSQANMAVYFTILEHGDTVLGMDLSH 121
Query: 118 --------PTN--NARFDFLS----------------------------SGTTCYSRCLD 139
P N F+F+S +G + YSR +D
Sbjct: 122 GGHLTHGSPVNFSGKLFNFVSYGVDKETEEINYDVVRELAIKHKPKLIVAGASAYSRIID 181
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
+ +FR+ICDE + + DM+HI+GL+A VT T K L
Sbjct: 182 FKKFREICDEIGAYLMVDMAHIAGLVAAGLHPSPVPYADFVTSTTHKTLRGPRGGLILCK 241
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
Y + ++ +FP +QGGP H I A A +A FK Y A+V N L ++++KR
Sbjct: 242 EKYAKDLDKNIFPGMQGGPLMHIIAAKAVCFKEALDPSFKEYMARVVENCKELGEQLVKR 301
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
G+ +V+ GTD HLIL+DL +TG E +L+E+ I NKNT
Sbjct: 302 GFKLVSNGTDNHLILVDLNNKDITGKDAEKLLDEVGITLNKNT 344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,973,625
Number of Sequences: 539616
Number of extensions: 5249523
Number of successful extensions: 17329
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13970
Number of HSP's gapped (non-prelim): 1764
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)