Query psy10669
Match_columns 337
No_of_seqs 198 out of 1507
Neff 7.4
Searched_HMMs 46136
Date Fri Aug 16 15:32:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10669.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10669hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467|consensus 100.0 5.6E-91 1.2E-95 648.2 26.8 333 4-336 14-477 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 1.7E-88 3.6E-93 640.7 30.7 319 9-333 5-413 (413)
3 PLN02271 serine hydroxymethylt 100.0 4.3E-81 9.3E-86 621.5 32.7 332 5-336 123-586 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 1.6E-76 3.5E-81 574.9 22.6 294 11-304 1-395 (399)
5 PRK13580 serine hydroxymethylt 100.0 4.1E-67 8.8E-72 519.3 30.5 321 9-334 28-488 (493)
6 PLN03226 serine hydroxymethylt 100.0 8.1E-66 1.7E-70 515.2 33.3 332 4-335 8-467 (475)
7 PTZ00094 serine hydroxymethylt 100.0 3.5E-53 7.5E-58 423.0 32.3 327 8-334 12-452 (452)
8 PRK13034 serine hydroxymethylt 100.0 5.1E-52 1.1E-56 410.5 34.2 323 6-332 4-416 (416)
9 PRK00011 glyA serine hydroxyme 100.0 1.2E-38 2.5E-43 314.4 33.4 324 6-333 1-414 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 5.2E-35 1.1E-39 286.8 31.2 310 12-325 1-402 (402)
11 COG0156 BioF 7-keto-8-aminopel 100.0 2.3E-32 4.9E-37 265.5 20.7 236 31-280 39-351 (388)
12 PLN02955 8-amino-7-oxononanoat 99.9 1E-26 2.2E-31 230.9 19.7 233 30-282 101-424 (476)
13 KOG1359|consensus 99.9 2.6E-26 5.6E-31 210.2 17.3 235 31-280 67-373 (417)
14 KOG1360|consensus 99.9 5E-26 1.1E-30 215.3 19.2 240 29-282 169-487 (570)
15 PRK09064 5-aminolevulinate syn 99.9 2.3E-20 4.9E-25 183.7 25.3 234 31-280 46-358 (407)
16 TIGR01821 5aminolev_synth 5-am 99.9 5.8E-20 1.3E-24 180.7 23.7 234 31-280 45-357 (402)
17 PRK13393 5-aminolevulinate syn 99.8 2.9E-19 6.3E-24 176.1 25.2 234 31-280 45-357 (406)
18 PRK13392 5-aminolevulinate syn 99.8 5.7E-19 1.2E-23 174.2 25.2 233 32-280 47-358 (410)
19 PLN02483 serine palmitoyltrans 99.8 4.9E-18 1.1E-22 171.4 25.3 238 31-280 100-427 (489)
20 PRK07179 hypothetical protein; 99.8 7.8E-18 1.7E-22 165.9 24.7 233 29-278 52-357 (407)
21 PLN03227 serine palmitoyltrans 99.8 7E-18 1.5E-22 165.9 23.1 233 35-280 2-339 (392)
22 TIGR01822 2am3keto_CoA 2-amino 99.8 2.6E-17 5.7E-22 160.9 24.8 234 30-279 37-349 (393)
23 PRK05937 8-amino-7-oxononanoat 99.8 5.5E-17 1.2E-21 158.1 24.8 239 31-291 4-331 (370)
24 PLN02822 serine palmitoyltrans 99.8 6.3E-17 1.4E-21 163.1 22.9 238 31-281 109-437 (481)
25 COG0520 csdA Selenocysteine ly 99.8 2.1E-16 4.5E-21 155.9 24.9 237 40-281 32-362 (405)
26 cd06454 KBL_like KBL_like; thi 99.7 4.1E-15 9E-20 142.4 22.7 234 33-280 3-312 (349)
27 COG1104 NifS Cysteine sulfinat 99.7 2.3E-15 4.9E-20 145.3 20.6 235 38-282 9-324 (386)
28 KOG1357|consensus 99.7 4.7E-16 1E-20 150.0 15.1 230 33-278 138-461 (519)
29 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 5.3E-15 1.1E-19 144.2 22.3 242 31-288 7-347 (370)
30 PRK13238 tnaA tryptophanase/L- 99.7 2.9E-14 6.4E-19 142.9 25.6 250 30-302 36-421 (460)
31 PRK10874 cysteine sulfinate de 99.7 5.9E-14 1.3E-18 137.9 25.7 238 35-280 24-354 (401)
32 PF00266 Aminotran_5: Aminotra 99.6 5.7E-14 1.2E-18 136.6 23.7 238 36-280 5-337 (371)
33 TIGR03392 FeS_syn_CsdA cystein 99.6 9.5E-14 2.1E-18 136.3 25.3 238 35-280 21-351 (398)
34 PRK09331 Sep-tRNA:Cys-tRNA syn 99.6 9.4E-14 2E-18 136.2 23.7 233 32-278 20-347 (387)
35 TIGR03235 DNA_S_dndA cysteine 99.6 2.7E-14 5.9E-19 137.9 19.3 236 37-280 5-320 (353)
36 PRK09295 bifunctional cysteine 99.6 1.5E-13 3.3E-18 135.3 24.8 239 35-280 28-360 (406)
37 TIGR01979 sufS cysteine desulf 99.6 2.2E-13 4.7E-18 133.7 25.6 240 34-280 22-357 (403)
38 TIGR00858 bioF 8-amino-7-oxono 99.6 1.4E-13 3E-18 132.2 23.4 234 30-279 15-325 (360)
39 cd06451 AGAT_like Alanine-glyo 99.6 1.9E-13 4.2E-18 131.7 24.4 242 33-289 1-336 (356)
40 cd00617 Tnase_like Tryptophana 99.6 1.3E-13 2.8E-18 137.0 23.4 252 28-302 8-396 (431)
41 PRK02948 cysteine desulfurase; 99.6 8.6E-14 1.9E-18 135.7 21.1 234 37-280 7-319 (381)
42 TIGR03576 pyridox_MJ0158 pyrid 99.6 7.6E-14 1.6E-18 135.2 20.3 232 18-282 10-311 (346)
43 PRK06939 2-amino-3-ketobutyrat 99.6 3.2E-13 6.9E-18 131.8 24.9 231 33-280 45-354 (397)
44 PRK05958 8-amino-7-oxononanoat 99.6 2.6E-13 5.5E-18 131.8 23.1 235 30-280 39-348 (385)
45 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 9.8E-15 2.1E-19 143.4 12.8 201 77-282 67-401 (417)
46 PRK13520 L-tyrosine decarboxyl 99.6 5.1E-13 1.1E-17 129.3 23.7 258 15-289 4-350 (371)
47 TIGR01825 gly_Cac_T_rel pyrido 99.6 6.7E-13 1.5E-17 129.3 23.5 233 31-279 34-341 (385)
48 TIGR01977 am_tr_V_EF2568 cyste 99.6 4.3E-13 9.3E-18 130.1 21.8 230 42-280 12-333 (376)
49 PLN02855 Bifunctional selenocy 99.6 6.4E-13 1.4E-17 131.7 23.4 237 36-280 38-374 (424)
50 cd06453 SufS_like Cysteine des 99.6 8E-13 1.7E-17 128.3 22.8 238 36-280 5-335 (373)
51 PLN02651 cysteine desulfurase 99.6 2.8E-13 6.1E-18 131.6 19.3 232 37-279 6-320 (364)
52 PRK13237 tyrosine phenol-lyase 99.5 1E-12 2.2E-17 130.2 18.9 227 35-278 40-381 (460)
53 cd00611 PSAT_like Phosphoserin 99.5 3.3E-12 7.2E-17 124.0 22.1 236 34-279 2-321 (355)
54 TIGR02326 transamin_PhnW 2-ami 99.5 6.8E-12 1.5E-16 121.6 24.1 242 32-288 4-340 (363)
55 TIGR03402 FeS_nifS cysteine de 99.5 3.1E-12 6.8E-17 124.7 21.7 232 37-280 6-317 (379)
56 TIGR01814 kynureninase kynuren 99.5 4.5E-12 9.8E-17 125.0 21.8 247 31-288 27-384 (406)
57 TIGR01976 am_tr_V_VC1184 cyste 99.5 1E-11 2.2E-16 121.6 23.2 237 35-280 22-356 (397)
58 TIGR02006 IscS cysteine desulf 99.5 5.8E-12 1.3E-16 124.1 19.9 232 36-278 9-320 (402)
59 cd06452 SepCysS Sep-tRNA:Cys-t 99.4 1.4E-11 3E-16 119.5 20.8 235 37-288 8-341 (361)
60 TIGR03812 tyr_de_CO2_Arch tyro 99.4 2E-11 4.2E-16 118.4 21.5 233 41-289 31-355 (373)
61 PLN02409 serine--glyoxylate am 99.4 3.4E-11 7.4E-16 118.8 23.1 243 32-289 10-351 (401)
62 PRK15029 arginine decarboxylas 99.4 4.2E-12 9.2E-17 133.0 17.1 202 76-282 205-574 (755)
63 TIGR03403 nifS_epsilon cystein 99.4 2.9E-11 6.3E-16 118.1 21.8 235 37-280 6-320 (382)
64 cd06502 TA_like Low-specificit 99.4 6.7E-12 1.5E-16 119.8 16.5 234 36-290 2-321 (338)
65 TIGR02618 tyr_phenol_ly tyrosi 99.4 9.5E-12 2.1E-16 123.0 16.9 229 35-279 33-375 (450)
66 cd00616 AHBA_syn 3-amino-5-hyd 99.4 1.6E-11 3.5E-16 117.9 17.9 195 72-280 18-298 (352)
67 PRK13479 2-aminoethylphosphona 99.4 3.1E-10 6.8E-15 110.1 25.5 240 34-288 8-341 (368)
68 PRK02769 histidine decarboxyla 99.4 1.6E-10 3.4E-15 113.5 23.3 243 45-305 37-366 (380)
69 TIGR01366 serC_3 phosphoserine 99.4 1.9E-10 4.1E-15 112.1 23.6 232 35-280 7-324 (361)
70 cd00615 Orn_deC_like Ornithine 99.4 8.1E-12 1.7E-16 118.1 13.3 156 77-238 60-294 (294)
71 PRK07505 hypothetical protein; 99.4 2.6E-10 5.7E-15 112.4 24.3 234 30-280 45-360 (402)
72 PLN02724 Molybdenum cofactor s 99.4 8.3E-11 1.8E-15 125.6 22.2 240 37-280 41-417 (805)
73 PRK15400 lysine decarboxylase 99.3 3.8E-11 8.1E-16 124.9 17.3 199 77-282 196-529 (714)
74 TIGR01437 selA_rel uncharacter 99.3 3.3E-10 7.2E-15 110.4 23.0 227 40-289 23-345 (363)
75 KOG1549|consensus 99.3 6.6E-11 1.4E-15 115.2 17.1 194 36-238 49-321 (428)
76 TIGR03301 PhnW-AepZ 2-aminoeth 99.3 4.9E-10 1.1E-14 107.4 23.2 237 37-288 5-335 (355)
77 PRK15399 lysine decarboxylase 99.3 5.6E-11 1.2E-15 123.6 16.9 198 77-282 196-529 (713)
78 KOG1358|consensus 99.3 5.4E-11 1.2E-15 113.5 13.5 257 28-303 91-454 (467)
79 PRK13578 ornithine decarboxyla 99.3 1.8E-10 4E-15 119.9 18.0 198 77-282 175-535 (720)
80 COG0075 Serine-pyruvate aminot 99.2 2.4E-09 5.3E-14 104.1 22.9 241 32-288 6-341 (383)
81 PRK11658 UDP-4-amino-4-deoxy-L 99.2 9.1E-10 2E-14 107.9 20.1 217 42-279 12-321 (379)
82 PRK14012 cysteine desulfurase; 99.2 3.7E-10 8.1E-15 111.3 17.4 228 37-273 10-319 (404)
83 TIGR03588 PseC UDP-4-keto-6-de 99.2 7.9E-10 1.7E-14 108.1 19.2 196 72-280 29-325 (380)
84 PLN03032 serine decarboxylase; 99.2 1.8E-09 3.9E-14 105.7 21.4 237 42-292 35-359 (374)
85 TIGR01364 serC_1 phosphoserine 99.2 3E-09 6.6E-14 103.2 22.4 235 42-288 3-326 (349)
86 PRK00854 rocD ornithine--oxo-a 99.2 2.8E-09 6.1E-14 104.8 22.2 229 43-290 59-381 (401)
87 TIGR01788 Glu-decarb-GAD gluta 99.2 1.1E-09 2.4E-14 109.1 18.3 232 40-279 51-389 (431)
88 COG2008 GLY1 Threonine aldolas 99.2 1.3E-09 2.8E-14 103.7 17.6 235 35-292 3-325 (342)
89 PRK05355 3-phosphoserine/phosp 99.2 7.5E-09 1.6E-13 100.9 22.8 246 32-288 4-336 (360)
90 TIGR03246 arg_catab_astC succi 99.2 6.2E-09 1.4E-13 102.6 22.5 237 31-288 35-373 (397)
91 PRK10534 L-threonine aldolase; 99.2 2.6E-09 5.6E-14 102.3 18.8 221 42-288 12-311 (333)
92 cd06450 DOPA_deC_like DOPA dec 99.2 2.6E-09 5.6E-14 102.4 18.6 204 68-288 30-325 (345)
93 PRK04366 glycine dehydrogenase 99.1 1.2E-08 2.5E-13 103.3 23.8 234 36-279 76-410 (481)
94 PLN02721 threonine aldolase 99.1 1.4E-08 3E-13 97.6 22.8 226 42-288 18-330 (353)
95 COG1982 LdcC Arginine/lysine/o 99.1 2E-09 4.4E-14 108.4 17.2 200 77-282 71-376 (557)
96 PRK03080 phosphoserine aminotr 99.1 4.9E-09 1.1E-13 102.7 19.4 241 32-288 13-351 (378)
97 TIGR01885 Orn_aminotrans ornit 99.1 6.7E-09 1.4E-13 102.3 20.2 227 43-289 55-381 (401)
98 cd00613 GDC-P Glycine cleavage 99.1 4.6E-09 1E-13 102.8 18.8 166 124-290 160-384 (398)
99 PRK05968 hypothetical protein; 99.1 1.5E-09 3.2E-14 106.9 14.9 225 33-276 28-327 (389)
100 cd00614 CGS_like CGS_like: Cys 99.1 1.7E-09 3.8E-14 105.5 14.9 191 70-278 38-310 (369)
101 PF01041 DegT_DnrJ_EryC1: DegT 99.1 5.1E-09 1.1E-13 102.0 17.2 197 71-280 24-308 (363)
102 PRK06767 methionine gamma-lyas 99.1 2.7E-09 5.8E-14 104.9 15.2 161 70-244 59-284 (386)
103 COG0399 WecE Predicted pyridox 99.1 1.3E-08 2.8E-13 99.0 19.7 213 42-277 13-311 (374)
104 cd00609 AAT_like Aspartate ami 99.1 1.9E-08 4E-13 95.6 20.2 162 124-288 133-334 (350)
105 TIGR01328 met_gam_lyase methio 99.1 3.4E-09 7.4E-14 104.4 15.0 193 70-278 57-330 (391)
106 PLN02452 phosphoserine transam 99.0 4.2E-08 9.2E-13 95.8 22.2 253 29-292 5-346 (365)
107 PLN02242 methionine gamma-lyas 99.0 4.8E-09 1E-13 104.2 15.8 164 70-246 74-304 (418)
108 TIGR01324 cysta_beta_ly_B cyst 99.0 8.2E-09 1.8E-13 101.3 16.5 190 69-275 47-317 (377)
109 TIGR01141 hisC histidinol-phos 99.0 6E-08 1.3E-12 93.2 22.1 222 31-280 20-317 (346)
110 PTZ00125 ornithine aminotransf 99.0 9.4E-08 2E-12 93.8 22.7 228 42-289 48-374 (400)
111 PRK04073 rocD ornithine--oxo-a 99.0 9.3E-08 2E-12 94.1 22.5 226 43-289 58-376 (396)
112 PRK03244 argD acetylornithine 99.0 7.7E-08 1.7E-12 94.5 21.9 230 43-290 61-374 (398)
113 PRK07504 O-succinylhomoserine 99.0 1.1E-08 2.3E-13 101.1 14.9 198 61-278 56-335 (398)
114 PRK02731 histidinol-phosphate 99.0 1.6E-07 3.4E-12 91.1 22.8 234 30-288 32-347 (367)
115 PRK05387 histidinol-phosphate 98.9 1.8E-07 3.9E-12 90.1 22.1 228 30-279 24-319 (353)
116 PRK03321 putative aminotransfe 98.9 2.4E-07 5.1E-12 89.5 21.8 231 31-288 23-332 (352)
117 TIGR00707 argD acetylornithine 98.9 1.3E-07 2.8E-12 91.9 20.0 227 39-288 38-359 (379)
118 PRK04311 selenocysteine syntha 98.9 1.7E-07 3.7E-12 94.3 20.9 219 40-274 96-426 (464)
119 PRK00950 histidinol-phosphate 98.9 2.9E-07 6.3E-12 89.0 21.9 220 31-280 35-327 (361)
120 TIGR01325 O_suc_HS_sulf O-succ 98.9 3E-08 6.4E-13 97.3 15.1 186 35-239 21-270 (380)
121 PLN02414 glycine dehydrogenase 98.9 6.5E-08 1.4E-12 104.5 18.4 201 75-280 567-872 (993)
122 PRK03715 argD acetylornithine 98.9 2.7E-07 6E-12 91.0 20.9 154 125-290 181-373 (395)
123 PRK01278 argD acetylornithine 98.9 5.6E-07 1.2E-11 88.2 22.9 224 43-289 49-367 (389)
124 TIGR00474 selA seryl-tRNA(sec) 98.9 3E-07 6.6E-12 92.2 21.3 218 41-275 92-422 (454)
125 PRK08574 cystathionine gamma-s 98.9 3.6E-08 7.7E-13 97.0 14.1 155 70-239 51-269 (385)
126 COG0076 GadB Glutamate decarbo 98.9 2.9E-07 6.3E-12 92.4 20.8 264 11-286 40-411 (460)
127 PRK02936 argD acetylornithine 98.9 1.4E-07 3E-12 92.0 18.2 237 30-289 28-358 (377)
128 PRK15407 lipopolysaccharide bi 98.9 4.4E-07 9.4E-12 90.8 21.9 193 73-279 64-375 (438)
129 PRK06225 aspartate aminotransf 98.9 1.1E-06 2.4E-11 85.8 24.4 234 30-280 28-339 (380)
130 PRK06108 aspartate aminotransf 98.9 2.1E-06 4.5E-11 83.6 26.2 236 30-280 24-346 (382)
131 PRK05093 argD bifunctional N-s 98.9 4.8E-07 1E-11 89.2 21.7 230 40-289 52-379 (403)
132 cd00610 OAT_like Acetyl ornith 98.9 2.2E-07 4.7E-12 91.3 19.1 238 31-288 37-393 (413)
133 PRK08133 O-succinylhomoserine 98.9 5.8E-08 1.3E-12 95.7 15.0 222 35-278 28-330 (390)
134 PRK12381 bifunctional succinyl 98.8 4E-07 8.6E-12 90.1 20.0 232 39-290 50-379 (406)
135 PRK09082 methionine aminotrans 98.8 1.5E-06 3.2E-11 85.2 23.9 259 11-281 12-352 (386)
136 PRK06460 hypothetical protein; 98.8 8.8E-08 1.9E-12 93.9 14.9 153 72-239 45-261 (376)
137 PRK07810 O-succinylhomoserine 98.8 6.2E-08 1.3E-12 95.9 13.8 158 70-242 68-291 (403)
138 PRK06234 methionine gamma-lyas 98.8 1.1E-07 2.4E-12 93.9 15.4 157 70-239 62-284 (400)
139 PRK07503 methionine gamma-lyas 98.8 1E-07 2.2E-12 94.3 14.8 157 70-239 63-283 (403)
140 TIGR02379 ECA_wecE TDP-4-keto- 98.8 5.9E-07 1.3E-11 88.1 19.8 214 42-279 9-318 (376)
141 PRK08249 cystathionine gamma-s 98.8 1.2E-07 2.6E-12 93.7 14.7 155 70-239 62-280 (398)
142 PRK03317 histidinol-phosphate 98.8 2.2E-06 4.7E-11 83.4 23.1 232 31-288 27-345 (368)
143 TIGR03540 DapC_direct LL-diami 98.8 5.6E-06 1.2E-10 80.9 25.9 243 28-281 27-351 (383)
144 PRK08361 aspartate aminotransf 98.8 3.5E-06 7.6E-11 82.6 24.1 238 30-280 33-354 (391)
145 PRK03158 histidinol-phosphate 98.8 2.2E-06 4.8E-11 82.9 22.2 224 31-281 30-329 (359)
146 PRK14807 histidinol-phosphate 98.7 1.9E-06 4E-11 83.4 21.5 222 31-280 23-318 (351)
147 PRK12566 glycine dehydrogenase 98.7 3.6E-07 7.8E-12 97.5 17.5 198 83-287 550-853 (954)
148 PRK12414 putative aminotransfe 98.7 3.5E-06 7.5E-11 82.6 23.3 257 11-280 11-349 (384)
149 TIGR01329 cysta_beta_ly_E cyst 98.7 1.7E-07 3.8E-12 91.9 14.0 154 70-239 45-263 (378)
150 PLN02624 ornithine-delta-amino 98.7 2.1E-06 4.6E-11 86.7 22.0 227 43-289 93-423 (474)
151 PRK07812 O-acetylhomoserine am 98.7 1.6E-07 3.4E-12 93.9 13.3 88 70-166 67-200 (436)
152 PLN03026 histidinol-phosphate 98.7 4.3E-06 9.3E-11 82.0 23.0 225 30-281 52-350 (380)
153 PRK11706 TDP-4-oxo-6-deoxy-D-g 98.7 1.7E-06 3.7E-11 84.6 20.1 193 72-279 31-317 (375)
154 PRK08064 cystathionine beta-ly 98.7 8.3E-07 1.8E-11 87.5 18.0 195 70-287 52-328 (390)
155 PRK07811 cystathionine gamma-s 98.7 4.2E-07 9E-12 89.5 15.6 189 70-276 59-329 (388)
156 PRK05613 O-acetylhomoserine am 98.7 4.5E-07 9.8E-12 90.7 15.7 121 33-166 34-200 (437)
157 PF00155 Aminotran_1_2: Aminot 98.7 4.1E-07 9E-12 87.7 14.8 158 125-288 150-348 (363)
158 PRK07550 hypothetical protein; 98.7 9.4E-06 2E-10 79.4 24.4 252 17-280 16-350 (386)
159 PRK08153 histidinol-phosphate 98.7 4E-06 8.7E-11 81.8 21.7 234 32-289 34-347 (369)
160 PRK07682 hypothetical protein; 98.7 2.2E-05 4.7E-10 76.6 26.4 238 30-280 20-340 (378)
161 PLN02509 cystathionine beta-ly 98.6 7.6E-07 1.6E-11 89.6 15.3 156 70-241 131-352 (464)
162 PRK01533 histidinol-phosphate 98.6 9.7E-06 2.1E-10 79.1 22.6 226 31-287 30-335 (366)
163 TIGR00461 gcvP glycine dehydro 98.6 6.9E-07 1.5E-11 95.8 15.6 201 75-280 529-832 (939)
164 PRK05764 aspartate aminotransf 98.6 1.4E-05 3.1E-10 78.2 23.7 244 30-287 31-370 (393)
165 PRK08861 cystathionine gamma-s 98.6 6.9E-07 1.5E-11 88.0 14.3 155 70-239 51-270 (388)
166 PRK08114 cystathionine beta-ly 98.6 5E-07 1.1E-11 89.2 13.2 192 70-277 60-334 (395)
167 PRK07050 cystathionine beta-ly 98.6 4.5E-07 9.7E-12 89.5 12.9 155 70-239 63-282 (394)
168 PRK08912 hypothetical protein; 98.6 1.4E-05 3.1E-10 78.1 23.4 154 124-280 160-348 (387)
169 PRK04870 histidinol-phosphate 98.6 2.1E-05 4.4E-10 76.1 24.2 227 30-281 26-324 (356)
170 PRK00451 glycine dehydrogenase 98.6 3.7E-06 8E-11 84.0 19.5 189 81-278 117-407 (447)
171 PRK05957 aspartate aminotransf 98.6 2.4E-05 5.2E-10 76.8 24.8 254 16-282 13-350 (389)
172 KOG1368|consensus 98.6 1.1E-06 2.4E-11 81.8 14.3 214 61-291 45-349 (384)
173 PRK07777 aminotransferase; Val 98.6 1.9E-05 4.1E-10 77.3 23.9 238 31-280 25-347 (387)
174 PRK06434 cystathionine gamma-l 98.6 7.6E-07 1.7E-11 87.6 13.8 187 70-277 62-323 (384)
175 PLN00175 aminotransferase fami 98.6 2.2E-05 4.7E-10 77.9 24.3 239 31-280 55-374 (413)
176 PRK07582 cystathionine gamma-l 98.6 3E-06 6.5E-11 82.8 17.9 190 70-279 49-317 (366)
177 PRK08134 O-acetylhomoserine am 98.6 8.8E-07 1.9E-11 88.5 14.1 88 70-166 62-194 (433)
178 TIGR03539 DapC_actino succinyl 98.6 1.9E-05 4.1E-10 76.6 23.0 150 124-280 143-326 (357)
179 PRK09276 LL-diaminopimelate am 98.6 4.4E-05 9.6E-10 74.6 25.4 154 124-281 167-353 (385)
180 PRK07683 aminotransferase A; V 98.6 2.1E-05 4.5E-10 77.2 23.1 238 30-280 28-347 (387)
181 PRK08117 4-aminobutyrate amino 98.6 5.6E-06 1.2E-10 82.6 19.4 158 126-289 210-408 (433)
182 PRK08776 cystathionine gamma-s 98.6 1.5E-06 3.4E-11 86.0 15.2 188 72-278 60-330 (405)
183 PRK07309 aromatic amino acid a 98.6 2.9E-05 6.2E-10 76.3 23.8 241 31-282 31-354 (391)
184 PRK14808 histidinol-phosphate 98.5 2.8E-05 6E-10 74.9 23.1 233 30-288 19-318 (335)
185 PRK08960 hypothetical protein; 98.5 3.8E-05 8.1E-10 75.3 24.3 236 29-281 31-351 (387)
186 PRK07865 N-succinyldiaminopime 98.5 2E-05 4.3E-10 76.5 22.2 252 9-280 5-332 (364)
187 PRK06084 O-acetylhomoserine am 98.5 1.1E-06 2.4E-11 87.6 13.5 120 34-166 24-188 (425)
188 TIGR01140 L_thr_O3P_dcar L-thr 98.5 9.4E-06 2E-10 77.9 19.6 190 82-288 53-316 (330)
189 PLN02263 serine decarboxylase 98.5 5.2E-06 1.1E-10 83.3 18.2 183 60-245 115-387 (470)
190 TIGR02080 O_succ_thio_ly O-suc 98.5 3.2E-06 7E-11 83.1 16.6 155 70-239 49-268 (382)
191 PRK09105 putative aminotransfe 98.5 1.9E-05 4.1E-10 77.2 21.8 229 31-287 44-350 (370)
192 PRK02627 acetylornithine amino 98.5 9.3E-06 2E-10 79.5 19.7 157 124-288 183-372 (396)
193 PRK08045 cystathionine gamma-s 98.5 3.2E-06 7E-11 83.2 16.4 190 70-277 50-321 (386)
194 PRK04635 histidinol-phosphate 98.5 8.7E-06 1.9E-10 78.8 18.6 192 83-287 67-335 (354)
195 PRK05367 glycine dehydrogenase 98.5 3.6E-06 7.8E-11 91.3 17.0 201 75-280 541-840 (954)
196 PRK05939 hypothetical protein; 98.5 1.7E-06 3.8E-11 85.5 13.4 87 70-165 45-175 (397)
197 PRK09028 cystathionine beta-ly 98.5 1.9E-06 4.1E-11 85.1 13.4 154 71-239 60-277 (394)
198 PRK00062 glutamate-1-semialdeh 98.5 1.4E-05 3E-10 79.7 19.6 151 125-281 199-395 (426)
199 PRK07681 aspartate aminotransf 98.5 9.6E-05 2.1E-09 72.7 25.4 239 29-281 31-353 (399)
200 TIGR01265 tyr_nico_aTase tyros 98.5 5.2E-05 1.1E-09 74.8 23.4 249 18-282 19-369 (403)
201 TIGR03537 DapC succinyldiamino 98.5 2.1E-05 4.5E-10 76.0 20.0 152 124-280 137-317 (350)
202 PLN02880 tyrosine decarboxylas 98.5 1.8E-05 3.9E-10 80.4 19.9 186 73-259 119-419 (490)
203 COG0079 HisC Histidinol-phosph 98.5 5.6E-05 1.2E-09 73.7 22.5 228 32-287 24-334 (356)
204 PRK05994 O-acetylhomoserine am 98.4 3.8E-06 8.2E-11 83.8 14.6 87 71-166 62-193 (427)
205 PRK06702 O-acetylhomoserine am 98.4 3.8E-06 8.2E-11 83.9 14.4 88 70-166 59-192 (432)
206 PRK08056 threonine-phosphate d 98.4 4E-05 8.7E-10 74.3 21.2 224 31-282 21-322 (356)
207 TIGR02617 tnaA_trp_ase tryptop 98.4 2.6E-05 5.6E-10 77.4 19.8 210 43-278 56-389 (467)
208 PRK05942 aspartate aminotransf 98.4 0.00012 2.5E-09 72.0 24.7 153 124-280 171-356 (394)
209 PRK07324 transaminase; Validat 98.4 1.9E-05 4.1E-10 77.2 18.8 196 83-287 69-349 (373)
210 PRK07269 cystathionine gamma-s 98.4 4.1E-06 9E-11 81.8 14.0 185 70-275 52-301 (364)
211 PRK07908 hypothetical protein; 98.4 7.6E-05 1.7E-09 72.0 22.7 229 26-280 18-312 (349)
212 PRK07337 aminotransferase; Val 98.4 6.5E-05 1.4E-09 73.6 22.5 242 29-280 29-352 (388)
213 PLN02760 4-aminobutyrate:pyruv 98.4 5.1E-06 1.1E-10 84.6 15.0 191 126-328 263-502 (504)
214 PRK08068 transaminase; Reviewe 98.4 0.00015 3.3E-09 71.0 24.9 153 124-280 168-353 (389)
215 PRK05967 cystathionine beta-ly 98.4 4.2E-06 9.2E-11 82.6 13.6 155 70-239 62-280 (395)
216 COG1103 Archaea-specific pyrid 98.4 3.2E-05 7E-10 71.5 17.7 253 27-299 14-365 (382)
217 PRK06348 aspartate aminotransf 98.4 0.00018 3.9E-09 70.5 24.5 263 4-280 3-349 (384)
218 PRK08247 cystathionine gamma-s 98.4 1.2E-05 2.6E-10 78.6 16.0 173 70-258 50-288 (366)
219 PRK07671 cystathionine beta-ly 98.4 8.3E-06 1.8E-10 80.1 14.4 154 70-239 48-266 (377)
220 PRK01688 histidinol-phosphate 98.4 4.5E-05 9.7E-10 73.9 19.2 220 31-280 29-322 (351)
221 TIGR01326 OAH_OAS_sulfhy OAH/O 98.4 6.5E-06 1.4E-10 81.9 13.5 87 70-165 55-186 (418)
222 PF01053 Cys_Met_Meta_PP: Cys/ 98.3 5.8E-06 1.3E-10 81.4 12.6 192 70-279 53-328 (386)
223 PRK11522 putrescine--2-oxoglut 98.3 4.9E-05 1.1E-09 76.6 19.4 156 126-289 234-430 (459)
224 PRK06290 aspartate aminotransf 98.3 0.00042 9E-09 68.8 25.7 247 31-291 45-385 (410)
225 PRK04612 argD acetylornithine 98.3 8E-05 1.7E-09 73.9 20.3 146 140-290 210-383 (408)
226 TIGR03531 selenium_SpcS O-phos 98.3 7.1E-05 1.5E-09 74.9 19.8 196 74-276 103-386 (444)
227 COG1168 MalY Bifunctional PLP- 98.3 0.00021 4.6E-09 69.0 22.0 236 31-280 26-350 (388)
228 PLN02590 probable tyrosine dec 98.3 0.00027 5.8E-09 72.5 24.3 183 72-258 166-464 (539)
229 PRK08248 O-acetylhomoserine am 98.3 1.2E-05 2.6E-10 80.4 14.0 88 70-166 62-194 (431)
230 PRK12462 phosphoserine aminotr 98.3 0.0003 6.4E-09 68.8 23.0 252 30-292 3-345 (364)
231 PRK06176 cystathionine gamma-s 98.3 8.9E-06 1.9E-10 80.0 12.5 154 70-239 48-266 (380)
232 TIGR03372 putres_am_tran putre 98.3 8E-05 1.7E-09 74.7 19.5 157 125-289 226-423 (442)
233 KOG2862|consensus 98.3 0.00014 3.1E-09 68.4 19.2 240 34-288 20-359 (385)
234 COG0626 MetC Cystathionine bet 98.3 3.1E-05 6.8E-10 76.1 15.5 192 70-279 61-335 (396)
235 PRK14809 histidinol-phosphate 98.2 0.00023 4.9E-09 68.9 21.4 222 30-282 30-326 (357)
236 PLN00144 acetylornithine trans 98.2 0.00016 3.5E-09 71.1 20.5 159 124-290 168-360 (382)
237 PF00282 Pyridoxal_deC: Pyrido 98.2 0.0001 2.3E-09 72.3 19.0 175 70-245 73-361 (373)
238 KOG1383|consensus 98.2 0.00014 3.1E-09 71.6 19.4 155 124-282 219-414 (491)
239 PRK08175 aminotransferase; Val 98.2 0.00067 1.5E-08 66.7 24.2 155 124-281 165-354 (395)
240 PRK05166 histidinol-phosphate 98.2 0.00029 6.2E-09 68.7 21.1 224 31-281 37-339 (371)
241 PRK08363 alanine aminotransfer 98.2 0.0006 1.3E-08 67.1 23.5 237 31-280 31-358 (398)
242 PRK04260 acetylornithine amino 98.2 0.00016 3.5E-09 70.5 19.2 141 140-290 188-357 (375)
243 PRK07366 succinyldiaminopimela 98.2 0.0013 2.8E-08 64.4 25.4 242 28-281 28-355 (388)
244 PRK06173 adenosylmethionine--8 98.2 1.6E-05 3.5E-10 79.4 12.1 143 140-289 230-404 (429)
245 PRK12403 putative aminotransfe 98.2 7.2E-05 1.6E-09 75.4 16.9 108 126-238 225-366 (460)
246 PRK06959 putative threonine-ph 98.2 0.00019 4E-09 69.4 19.2 191 82-288 59-313 (339)
247 COG0001 HemL Glutamate-1-semia 98.2 0.00037 8E-09 68.8 21.2 198 43-259 71-365 (432)
248 PRK09148 aminotransferase; Val 98.2 0.00079 1.7E-08 66.5 23.8 162 124-288 166-370 (405)
249 PLN02414 glycine dehydrogenase 98.2 0.00021 4.5E-09 77.8 21.0 156 131-292 243-451 (993)
250 COG4992 ArgD Ornithine/acetylo 98.2 0.00026 5.6E-09 69.2 19.6 162 124-290 185-378 (404)
251 PRK04781 histidinol-phosphate 98.2 0.00019 4.1E-09 69.9 18.8 187 82-281 65-330 (364)
252 COG3844 Kynureninase [Amino ac 98.2 7.7E-05 1.7E-09 70.6 15.1 240 43-292 44-384 (407)
253 TIGR01264 tyr_amTase_E tyrosin 98.2 0.00079 1.7E-08 66.2 23.3 253 12-282 11-367 (401)
254 PLN02656 tyrosine transaminase 98.1 0.00042 9.1E-09 68.6 21.0 240 27-282 28-371 (409)
255 TIGR00508 bioA adenosylmethion 98.1 7E-05 1.5E-09 74.8 15.3 148 137-291 228-407 (427)
256 PRK05664 threonine-phosphate d 98.1 0.00029 6.3E-09 67.6 18.6 155 124-289 125-309 (330)
257 PRK00615 glutamate-1-semialdeh 98.1 6.5E-05 1.4E-09 75.2 14.5 151 124-280 202-398 (433)
258 PLN00145 tyrosine/nicotianamin 98.1 0.0018 3.8E-08 64.7 24.2 156 124-281 191-391 (430)
259 TIGR01365 serC_2 phosphoserine 98.1 0.00029 6.3E-09 69.2 17.9 216 68-288 32-351 (374)
260 PRK07986 adenosylmethionine--8 98.1 6.8E-05 1.5E-09 74.9 13.6 145 138-289 226-402 (428)
261 PRK06358 threonine-phosphate d 98.0 0.0017 3.7E-08 62.9 22.8 222 32-282 21-322 (354)
262 PRK06082 4-aminobutyrate amino 98.0 0.00052 1.1E-08 69.2 19.8 145 140-289 251-430 (459)
263 PRK08636 aspartate aminotransf 98.0 0.0039 8.5E-08 61.4 25.6 155 124-281 176-365 (403)
264 PRK06149 hypothetical protein; 98.0 0.00048 1E-08 75.6 20.8 138 140-281 767-937 (972)
265 PRK07049 methionine gamma-lyas 98.0 8.6E-05 1.9E-09 74.2 13.4 158 70-242 81-315 (427)
266 PRK06107 aspartate aminotransf 98.0 0.0016 3.4E-08 64.2 22.3 250 20-281 23-367 (402)
267 COG0436 Aspartate/tyrosine/aro 98.0 0.0021 4.6E-08 63.5 22.6 242 31-282 29-356 (393)
268 PRK07590 L,L-diaminopimelate a 98.0 0.0028 6.1E-08 62.6 23.5 155 124-281 177-376 (409)
269 PF01212 Beta_elim_lyase: Beta 98.0 1.4E-05 2.9E-10 75.9 6.7 195 37-256 3-286 (290)
270 TIGR00713 hemL glutamate-1-sem 98.0 0.0012 2.7E-08 65.4 20.8 137 140-281 218-393 (423)
271 PRK05964 adenosylmethionine--8 98.0 0.00013 2.9E-09 72.5 13.8 147 140-290 223-402 (423)
272 PRK02610 histidinol-phosphate 98.0 0.0027 5.8E-08 62.0 22.6 157 124-288 169-352 (374)
273 PRK06207 aspartate aminotransf 98.0 0.0022 4.7E-08 63.5 22.2 243 29-281 38-367 (405)
274 PRK15481 transcriptional regul 97.9 0.0014 3E-08 65.2 20.0 150 124-281 212-394 (431)
275 PRK13360 omega amino acid--pyr 97.9 0.00017 3.7E-09 72.3 13.2 157 125-289 217-419 (442)
276 cd01494 AAT_I Aspartate aminot 97.9 6.2E-05 1.3E-09 63.6 8.6 82 82-166 6-137 (170)
277 TIGR03542 DAPAT_plant LL-diami 97.9 0.0046 1E-07 60.9 23.2 155 124-281 174-369 (402)
278 PRK06425 histidinol-phosphate 97.9 0.0017 3.7E-08 62.3 19.5 184 82-281 46-299 (332)
279 PRK07392 threonine-phosphate d 97.9 0.0026 5.5E-08 61.7 20.8 225 29-282 21-326 (360)
280 PTZ00433 tyrosine aminotransfe 97.9 0.0018 4E-08 64.0 19.8 155 124-282 178-376 (412)
281 PLN02482 glutamate-1-semialdeh 97.9 0.00018 4E-09 72.7 12.8 110 125-239 248-387 (474)
282 PRK06209 glutamate-1-semialdeh 97.9 0.0002 4.3E-09 71.6 12.9 156 124-287 188-384 (431)
283 PRK03967 histidinol-phosphate 97.8 0.0032 6.9E-08 60.6 20.7 223 31-288 19-315 (337)
284 COG3033 TnaA Tryptophanase [Am 97.8 0.00078 1.7E-08 64.7 15.8 135 140-279 208-393 (471)
285 TIGR03799 NOD_PanD_pyr putativ 97.8 0.0003 6.6E-09 72.0 14.2 127 131-259 275-439 (522)
286 PRK06105 aminotransferase; Pro 97.8 0.0013 2.8E-08 66.4 18.3 147 140-290 241-429 (460)
287 PLN00143 tyrosine/nicotianamin 97.8 0.0022 4.7E-08 63.5 19.7 156 125-282 173-372 (409)
288 PRK09265 aminotransferase AlaT 97.8 0.012 2.6E-07 58.0 24.5 152 124-280 169-365 (404)
289 PRK04013 argD acetylornithine/ 97.8 0.0019 4.2E-08 63.2 18.5 151 124-289 163-339 (364)
290 PRK09221 beta alanine--pyruvat 97.8 0.00081 1.8E-08 67.5 16.0 160 125-289 220-422 (445)
291 PLN02376 1-aminocyclopropane-1 97.8 0.0018 3.9E-08 66.0 18.0 158 124-288 200-417 (496)
292 PLN02187 rooty/superroot1 97.8 0.0043 9.2E-08 62.6 20.6 158 125-282 207-406 (462)
293 TIGR03538 DapC_gpp succinyldia 97.7 0.0079 1.7E-07 59.0 22.0 245 17-280 14-353 (393)
294 PRK06062 hypothetical protein; 97.7 0.00054 1.2E-08 68.9 13.9 160 125-289 216-424 (451)
295 PRK05630 adenosylmethionine--8 97.7 0.00065 1.4E-08 67.8 13.4 147 135-287 219-397 (422)
296 PTZ00377 alanine aminotransfer 97.7 0.019 4.1E-07 58.1 23.9 157 123-282 218-440 (481)
297 PRK12389 glutamate-1-semialdeh 97.7 0.0012 2.6E-08 65.9 14.9 148 125-280 202-397 (428)
298 PRK07568 aspartate aminotransf 97.7 0.016 3.5E-07 56.6 22.7 151 124-280 163-353 (397)
299 PRK06836 aspartate aminotransf 97.7 0.064 1.4E-06 52.7 26.9 64 222-288 302-371 (394)
300 PRK06541 hypothetical protein; 97.7 0.001 2.2E-08 67.2 14.3 161 125-289 223-434 (460)
301 COG2873 MET17 O-acetylhomoseri 97.6 0.00086 1.9E-08 64.7 12.0 124 30-166 24-192 (426)
302 PRK05367 glycine dehydrogenase 97.6 0.00069 1.5E-08 73.9 12.8 158 131-292 215-424 (954)
303 KOG0053|consensus 97.6 0.0016 3.5E-08 63.9 13.7 155 70-239 75-294 (409)
304 COG0160 GabT 4-aminobutyrate a 97.6 0.0063 1.4E-07 60.9 18.1 161 124-290 223-425 (447)
305 PRK08593 4-aminobutyrate amino 97.6 0.0023 5.1E-08 64.2 15.4 146 140-289 230-408 (445)
306 PRK07046 aminotransferase; Val 97.5 0.0037 8E-08 63.0 16.5 95 140-238 241-363 (453)
307 PF03841 SelA: L-seryl-tRNA se 97.5 7.9E-05 1.7E-09 72.1 4.3 177 41-239 17-296 (367)
308 PRK05769 4-aminobutyrate amino 97.5 0.0018 3.9E-08 65.0 14.2 157 125-289 223-418 (441)
309 COG1921 SelA Selenocysteine sy 97.5 0.0036 7.9E-08 61.2 14.9 172 30-217 20-273 (395)
310 COG1003 GcvP Glycine cleavage 97.5 0.0027 5.9E-08 62.4 13.8 194 81-282 114-412 (496)
311 PRK09147 succinyldiaminopimela 97.4 0.046 1E-06 53.6 22.0 233 29-280 28-354 (396)
312 PRK08354 putative aminotransfe 97.4 0.041 8.9E-07 52.2 20.9 109 31-161 9-160 (311)
313 PRK13355 bifunctional HTH-doma 97.4 0.036 7.8E-07 56.7 21.5 153 124-281 282-479 (517)
314 PRK09264 diaminobutyrate--2-ox 97.4 0.0018 3.9E-08 64.6 11.7 158 125-289 200-395 (425)
315 KOG0257|consensus 97.4 0.008 1.7E-07 58.8 15.6 181 82-272 79-357 (420)
316 PLN02231 alanine transaminase 97.3 0.099 2.1E-06 53.9 24.4 156 124-282 272-492 (534)
317 TIGR00699 GABAtrns_euk 4-amino 97.3 0.0027 5.8E-08 64.1 12.3 158 125-289 253-445 (464)
318 PF06838 Met_gamma_lyase: Meth 97.3 0.017 3.8E-07 55.9 16.4 181 75-272 57-328 (403)
319 PRK05639 4-aminobutyrate amino 97.2 0.0035 7.5E-08 63.2 11.8 144 140-290 245-423 (457)
320 PLN02672 methionine S-methyltr 97.2 0.067 1.4E-06 59.1 21.9 236 30-281 697-1047(1082)
321 PLN02450 1-aminocyclopropane-1 97.2 0.04 8.7E-07 55.7 19.1 161 124-288 192-409 (468)
322 PRK07678 aminotransferase; Val 97.1 0.0056 1.2E-07 61.6 12.1 137 140-280 236-411 (451)
323 PRK07481 hypothetical protein; 97.1 0.012 2.7E-07 59.1 14.4 146 140-289 236-424 (449)
324 TIGR03251 LAT_fam L-lysine 6-t 97.1 0.0079 1.7E-07 60.2 12.6 148 137-289 238-413 (431)
325 TIGR02407 ectoine_ectB diamino 97.0 0.0047 1E-07 61.4 10.8 145 140-290 217-392 (412)
326 PRK08360 4-aminobutyrate amino 97.0 0.0088 1.9E-07 60.1 12.8 146 140-289 227-405 (443)
327 PRK05839 hypothetical protein; 97.0 0.23 5E-06 48.4 21.9 144 124-280 156-336 (374)
328 PRK06058 4-aminobutyrate amino 97.0 0.0064 1.4E-07 61.0 11.1 145 140-289 242-421 (443)
329 COG0161 BioA Adenosylmethionin 97.0 0.014 2.9E-07 58.4 13.1 143 135-281 233-413 (449)
330 TIGR03811 tyr_de_CO2_Ent tyros 97.0 0.12 2.5E-06 54.0 20.4 59 203-262 437-506 (608)
331 PLN02607 1-aminocyclopropane-1 97.0 0.065 1.4E-06 53.9 18.1 153 124-280 201-400 (447)
332 PRK08297 L-lysine aminotransfe 96.9 0.019 4.1E-07 57.7 13.5 156 124-287 226-418 (443)
333 PRK06916 adenosylmethionine--8 96.8 0.028 6E-07 56.8 14.4 143 140-287 247-432 (460)
334 PRK07036 hypothetical protein; 96.8 0.023 5E-07 57.5 13.5 158 125-287 222-429 (466)
335 PRK06917 hypothetical protein; 96.8 0.015 3.2E-07 58.5 11.9 138 140-281 223-399 (447)
336 PRK07482 hypothetical protein; 96.8 0.02 4.4E-07 57.8 12.8 145 140-287 243-431 (461)
337 PRK09792 4-aminobutyrate trans 96.8 0.021 4.6E-07 56.9 12.8 163 124-290 199-401 (421)
338 PRK07495 4-aminobutyrate amino 96.7 0.017 3.7E-07 57.7 11.9 145 140-289 221-400 (425)
339 PRK06777 4-aminobutyrate amino 96.7 0.024 5.3E-07 56.4 12.9 145 140-289 221-400 (421)
340 COG1448 TyrB Aspartate/tyrosin 96.7 0.13 2.8E-06 50.2 17.0 161 125-295 173-384 (396)
341 PRK06938 diaminobutyrate--2-ox 96.6 0.023 5.1E-07 57.4 12.2 94 140-238 254-368 (464)
342 PRK07483 hypothetical protein; 96.6 0.012 2.6E-07 59.1 10.0 137 140-280 223-398 (443)
343 TIGR00461 gcvP glycine dehydro 96.6 0.036 7.9E-07 60.2 13.6 159 130-292 202-413 (939)
344 PRK05965 hypothetical protein; 96.5 0.031 6.7E-07 56.4 12.4 147 140-289 238-426 (459)
345 PRK07480 putative aminotransfe 96.5 0.017 3.7E-07 58.2 10.2 146 140-289 242-427 (456)
346 TIGR00709 dat 2,4-diaminobutyr 96.4 0.032 6.9E-07 56.0 11.5 146 139-289 228-414 (442)
347 PRK06943 adenosylmethionine--8 96.4 0.057 1.2E-06 54.4 13.2 144 140-287 245-423 (453)
348 KOG2040|consensus 96.3 0.088 1.9E-06 54.4 13.9 152 125-280 683-883 (1001)
349 KOG0629|consensus 96.3 0.13 2.8E-06 50.8 14.4 128 124-253 254-428 (510)
350 TIGR00700 GABAtrnsam 4-aminobu 96.3 0.12 2.5E-06 51.5 14.7 144 140-289 220-399 (420)
351 PRK09440 avtA valine--pyruvate 96.3 0.14 3E-06 50.6 15.1 152 124-280 180-368 (416)
352 COG1167 ARO8 Transcriptional r 96.2 0.4 8.8E-06 48.4 18.3 179 99-280 157-415 (459)
353 PRK08088 4-aminobutyrate amino 96.2 0.18 3.9E-06 50.2 15.5 158 124-289 200-402 (425)
354 COG3977 Alanine-alpha-ketoisov 96.1 1.3 2.8E-05 42.2 21.9 153 124-282 180-370 (417)
355 KOG1404|consensus 96.1 0.033 7.2E-07 54.3 9.2 151 136-290 231-418 (442)
356 PRK08742 adenosylmethionine--8 96.1 0.13 2.9E-06 52.0 14.0 146 140-289 260-446 (472)
357 PRK06148 hypothetical protein; 96.0 0.087 1.9E-06 58.3 13.2 146 140-289 807-989 (1013)
358 PRK09275 aspartate aminotransf 96.0 0.83 1.8E-05 47.0 19.3 38 124-161 242-286 (527)
359 PF05889 SLA_LP_auto_ag: Solub 96.0 0.19 4E-06 49.4 13.7 148 124-277 155-340 (389)
360 PRK06918 4-aminobutyrate amino 95.9 0.09 2E-06 52.8 12.0 147 140-290 242-423 (451)
361 PRK06855 aminotransferase; Val 95.9 2.1 4.6E-05 42.7 24.3 132 125-259 173-345 (433)
362 TIGR03801 asp_4_decarbox aspar 95.9 0.79 1.7E-05 47.1 18.5 38 124-161 241-285 (521)
363 KOG1401|consensus 95.8 0.25 5.5E-06 48.5 13.9 95 142-239 231-348 (433)
364 PRK07030 adenosylmethionine--8 95.8 0.035 7.7E-07 56.1 8.5 144 140-287 238-423 (466)
365 COG4100 Cystathionine beta-lya 95.8 0.55 1.2E-05 44.7 15.5 186 44-246 38-314 (416)
366 COG1932 SerC Phosphoserine ami 95.6 0.87 1.9E-05 44.2 16.3 246 34-287 8-340 (365)
367 PRK06931 diaminobutyrate--2-ox 95.5 0.054 1.2E-06 54.7 8.4 95 140-238 248-362 (459)
368 PF00202 Aminotran_3: Aminotra 94.6 0.1 2.2E-06 50.4 7.3 95 140-238 200-315 (339)
369 KOG1402|consensus 94.3 0.36 7.9E-06 46.3 9.8 152 134-290 224-407 (427)
370 PLN02974 adenosylmethionine-8- 93.6 0.27 5.7E-06 53.2 8.6 149 140-291 608-799 (817)
371 KOG0259|consensus 92.1 9.8 0.00021 37.5 15.9 142 99-242 128-356 (447)
372 KOG3846|consensus 91.7 2.2 4.8E-05 40.8 10.7 150 135-287 228-437 (465)
373 KOG0256|consensus 91.3 6.8 0.00015 38.9 14.0 130 125-259 229-397 (471)
374 PF02347 GDC-P: Glycine cleava 91.2 3.9 8.5E-05 41.0 12.7 38 126-164 201-238 (429)
375 KOG0633|consensus 90.7 5 0.00011 37.6 11.8 167 123-292 160-364 (375)
376 KOG0628|consensus 90.5 9 0.0002 38.6 14.1 160 124-288 236-448 (511)
377 KOG1405|consensus 88.9 3 6.4E-05 40.7 9.2 140 140-286 294-459 (484)
378 PLN02397 aspartate transaminas 88.6 12 0.00027 37.1 14.1 64 218-289 334-401 (423)
379 PTZ00376 aspartate aminotransf 86.5 11 0.00023 37.1 12.2 62 220-289 318-383 (404)
380 PLN02368 alanine transaminase 86.1 3.8 8.2E-05 40.7 8.7 120 124-245 211-384 (407)
381 PRK12566 glycine dehydrogenase 85.8 13 0.00028 41.0 13.0 76 202-282 336-414 (954)
382 KOG1403|consensus 84.2 7.7 0.00017 37.1 9.1 75 24-112 44-118 (452)
383 PRK08637 hypothetical protein; 79.8 29 0.00063 33.8 12.1 63 223-288 296-365 (388)
384 PRK09257 aromatic amino acid a 77.5 39 0.00085 32.9 12.2 63 219-289 312-378 (396)
385 COG0403 GcvP Glycine cleavage 73.2 81 0.0017 31.7 12.7 30 216-245 355-386 (450)
386 PRK12595 bifunctional 3-deoxy- 64.4 9.5 0.00021 37.4 4.4 40 124-163 254-299 (360)
387 TIGR01361 DAHP_synth_Bsub phos 62.4 11 0.00024 35.1 4.3 40 124-163 161-206 (260)
388 PRK13397 3-deoxy-7-phosphohept 62.0 11 0.00024 35.0 4.1 41 124-164 151-197 (250)
389 PRK13396 3-deoxy-7-phosphohept 59.6 12 0.00026 36.6 4.1 43 124-166 237-286 (352)
390 COG2877 KdsA 3-deoxy-D-manno-o 56.9 14 0.0003 34.1 3.7 44 124-167 160-206 (279)
391 TIGR01362 KDO8P_synth 3-deoxy- 55.9 16 0.00034 34.1 4.0 42 124-166 145-190 (258)
392 PF08844 DUF1815: Domain of un 51.6 73 0.0016 25.0 6.4 30 216-245 6-35 (105)
393 KOG0258|consensus 49.1 97 0.0021 30.9 8.3 42 124-165 216-262 (475)
394 PRK13398 3-deoxy-7-phosphohept 47.9 20 0.00044 33.6 3.5 40 124-163 163-208 (266)
395 PF02571 CbiJ: Precorrin-6x re 44.0 20 0.00042 33.3 2.7 29 137-165 52-80 (249)
396 PLN03033 2-dehydro-3-deoxyphos 40.7 35 0.00076 32.3 3.8 40 124-164 159-202 (290)
397 PRK12457 2-dehydro-3-deoxyphos 38.7 44 0.00096 31.6 4.2 43 124-166 159-206 (281)
398 TIGR00421 ubiX_pad polyprenyl 37.5 2E+02 0.0043 25.2 8.0 65 30-94 112-176 (181)
399 PRK05198 2-dehydro-3-deoxyphos 36.5 44 0.00094 31.3 3.7 42 124-166 153-198 (264)
400 PRK08057 cobalt-precorrin-6x r 36.2 30 0.00066 32.0 2.7 29 137-165 51-79 (248)
401 PRK05920 aromatic acid decarbo 34.3 2.4E+02 0.0053 25.3 8.1 66 29-94 129-194 (204)
402 KOG0634|consensus 33.3 2.2E+02 0.0047 28.8 8.1 66 92-159 121-245 (472)
403 PF10081 Abhydrolase_9: Alpha/ 32.6 80 0.0017 30.0 4.8 29 123-151 108-138 (289)
404 KOG2790|consensus 31.5 4.8E+02 0.01 25.1 11.5 202 31-245 7-297 (370)
405 PF06733 DEAD_2: DEAD_2; Inte 29.2 23 0.00049 30.4 0.6 38 124-164 120-159 (174)
406 COG1751 Uncharacterized conser 28.8 2.6E+02 0.0056 24.2 6.8 80 69-161 7-92 (186)
407 COG2099 CobK Precorrin-6x redu 28.1 50 0.0011 30.8 2.6 27 137-163 52-78 (257)
408 PF00793 DAHP_synth_1: DAHP sy 26.5 48 0.001 31.2 2.3 31 136-166 179-209 (270)
409 COG1163 DRG Predicted GTPase [ 24.8 1.2E+02 0.0025 29.7 4.5 41 252-292 145-197 (365)
410 PRK02308 uvsE putative UV dama 24.7 2.3E+02 0.0049 27.0 6.6 80 75-162 130-216 (303)
411 COG2876 AroA 3-deoxy-D-arabino 24.1 59 0.0013 30.6 2.3 42 124-165 181-228 (286)
412 KOG3974|consensus 23.9 1.8E+02 0.0038 27.5 5.3 82 63-159 37-140 (306)
413 TIGR00034 aroFGH phospho-2-deh 23.3 57 0.0012 31.8 2.2 40 124-164 222-267 (344)
414 PRK08673 3-deoxy-7-phosphohept 22.9 1E+02 0.0022 30.0 3.8 41 124-164 229-275 (335)
415 COG5319 Uncharacterized protei 22.5 2.2E+02 0.0047 23.8 5.1 66 208-280 68-133 (142)
416 PRK06029 3-octaprenyl-4-hydrox 21.9 2.8E+02 0.006 24.5 6.1 64 30-94 115-179 (185)
417 COG1105 FruK Fructose-1-phosph 21.1 1.1E+02 0.0023 29.5 3.5 36 124-159 130-167 (310)
418 PLN02760 4-aminobutyrate:pyruv 21.1 2.6E+02 0.0056 28.7 6.6 63 43-116 107-171 (504)
419 PF15643 Tox-PL-2: Papain fold 20.7 1.8E+02 0.0038 23.2 4.0 73 224-304 20-97 (100)
420 COG2185 Sbm Methylmalonyl-CoA 20.6 2.6E+02 0.0057 23.7 5.4 49 229-277 29-93 (143)
421 PF03851 UvdE: UV-endonuclease 20.0 1.9E+02 0.004 27.4 4.9 81 75-162 126-214 (275)
No 1
>KOG2467|consensus
Probab=100.00 E-value=5.6e-91 Score=648.16 Aligned_cols=333 Identities=54% Similarity=0.869 Sum_probs=307.3
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHH
Q psy10669 4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQ 83 (337)
Q Consensus 4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~ 83 (337)
.+|.+.+|.+.|||++++|++|++||+++|+||||||++|.+|++|++|+|+|||+||+||.|||+|++++|++|.+||+
T Consensus 14 ~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~ 93 (477)
T KOG2467|consen 14 IKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQK 93 (477)
T ss_pred hhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHH
Confidence 36778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------------
Q psy10669 84 RSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------------- 119 (337)
Q Consensus 84 ~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------------- 119 (337)
|+.++|+++++.||+||||.||++||++||+||++|
T Consensus 94 RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~T 173 (477)
T KOG2467|consen 94 RALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPST 173 (477)
T ss_pred HHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCC
Confidence 999999999999999999999999999999999876
Q ss_pred ---------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec---
Q psy10669 120 ---------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT--- 172 (337)
Q Consensus 120 ---------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~--- 172 (337)
+.+ +||+||+|.|.|++++||+++++||+++||+||+|+||++||++ .|++|+
T Consensus 174 G~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKs 253 (477)
T KOG2467|consen 174 GYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKS 253 (477)
T ss_pred CceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccccc
Confidence 122 49999999999999999999999999999999999999999999 244443
Q ss_pred ---cCCchhh-----------------hhHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q psy10669 173 ---KTGEKIL-----------------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL 232 (337)
Q Consensus 173 ---~~Gg~i~-----------------~~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l 232 (337)
|+||+|+ +|++++||+++||++||+||+|.|+|+|+|++++.+|+|++|++||++|+++|
T Consensus 254 LRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakal 333 (477)
T KOG2467|consen 254 LRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKAL 333 (477)
T ss_pred ccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 3577774 25889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHH
Q psy10669 233 SDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDF 301 (337)
Q Consensus 233 ~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~ 301 (337)
+++|.++|+++++||||||+++||+++.|++|..+++.|+.++|.+|||+ |||||||++|+||+.++||
T Consensus 334 a~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df 413 (477)
T KOG2467|consen 334 ASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDF 413 (477)
T ss_pred HHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999999999998887
Q ss_pred HHH-------------H----------------hhCCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy10669 302 QTC-------------L----------------HKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336 (337)
Q Consensus 302 ~~~-------------~----------------~~~~~~~~~~~~lr~~V~~~~~~fp~p~~~~ 336 (337)
... + ..+..-.+++.+||++|++|+.+||+|++++
T Consensus 414 ~~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~~~~~v~~Lr~~Ve~fa~~fp~pg~~~ 477 (477)
T KOG2467|consen 414 EKVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKVMSEEVAELRKRVEEFAGQFPMPGFET 477 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCchhHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 541 0 0111113578999999999999999999864
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-88 Score=640.67 Aligned_cols=319 Identities=45% Similarity=0.678 Sum_probs=299.5
Q ss_pred hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
..|.+.||+|+++|++|..||+++|+|||||||+||.|++|++|.|+|||+||+||.|||+||+++|++|.+|++|+++|
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------------------------c
Q psy10669 89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------------N 120 (337)
Q Consensus 89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------------~ 120 (337)
||+++ +||||+||++||++||.||++| +
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k 160 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEK 160 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHH
Confidence 99998 7999999999999999999876 2
Q ss_pred cc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeeec------cCCchhh
Q psy10669 121 NA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGVT------KTGEKIL 179 (337)
Q Consensus 121 ~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T~------~~Gg~i~ 179 (337)
++ |||+||+|.|.|++.+|++++++|||++||+||+|+||.+|||++ +++|+ |+||+|+
T Consensus 161 ~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG~Il 240 (413)
T COG0112 161 LAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGGIIL 240 (413)
T ss_pred HHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCCceEEE
Confidence 22 499999999999999999999999999999999999999999993 44443 4799999
Q ss_pred h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669 180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID 256 (337)
Q Consensus 180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~ 256 (337)
+ ++.++||+++||++||+||+|.|||+++|++|+++++|++|++||++||++|++.|.++||+|++|+||||+++||
T Consensus 241 ~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVD 320 (413)
T COG0112 241 TNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVD 320 (413)
T ss_pred eccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEE
Confidence 7 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHH
Q psy10669 257 LRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAAL 318 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~l 318 (337)
+++.+++|..++..|+++||.+|||. ||||||+++|+|||+.+||.+ .++.+.+ +.++++
T Consensus 321 l~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~--~~~~~v 398 (413)
T COG0112 321 LRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK--DVPAEV 398 (413)
T ss_pred cccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc--hhHHHH
Confidence 99888999999999999999999999 999999999999999888765 3455433 567899
Q ss_pred HHHHHHHHhcCCCCC
Q psy10669 319 KKEIEDYSNQFEMPG 333 (337)
Q Consensus 319 r~~V~~~~~~fp~p~ 333 (337)
|++|.+||.+||+|+
T Consensus 399 k~~V~~l~~~fp~y~ 413 (413)
T COG0112 399 KEEVAELCRRFPLYK 413 (413)
T ss_pred HHHHHHHHHhCCCCC
Confidence 999999999999974
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=4.3e-81 Score=621.52 Aligned_cols=332 Identities=48% Similarity=0.743 Sum_probs=305.5
Q ss_pred hhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHH
Q psy10669 5 TMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQR 84 (337)
Q Consensus 5 ~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~ 84 (337)
.|.++.|++.||||+++|++|++||+++|+|||||||+||.|+++++|+|+|||++|+||+|||+||+++|+||.+|++|
T Consensus 123 ~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~er 202 (586)
T PLN02271 123 AWGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCER 202 (586)
T ss_pred HHHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHH
Confidence 47777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------------
Q psy10669 85 SLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------------- 119 (337)
Q Consensus 85 ~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------------- 119 (337)
++++||+++++||+||||+||++||+++|.||++|
T Consensus 203 a~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~ 282 (586)
T PLN02271 203 ALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQT 282 (586)
T ss_pred HHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccccc
Confidence 99999999999999999999999999999999765
Q ss_pred ---------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeeec---
Q psy10669 120 ---------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGVT--- 172 (337)
Q Consensus 120 ---------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T~--- 172 (337)
+++ +||+||+++|+|++.+|+++|++||+++|++||||+||++|+|++ +++|+
T Consensus 283 g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKt 362 (586)
T PLN02271 283 GYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKS 362 (586)
T ss_pred CccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCccc
Confidence 112 399999999999999999999999999999999999999999972 45554
Q ss_pred ---cCCchhhh-h---------------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q psy10669 173 ---KTGEKILY-D---------------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKA 227 (337)
Q Consensus 173 ---~~Gg~i~~-~---------------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~ 227 (337)
|+||+|++ + +.++|++++||+++|+||+|.|||++++++++..++|++|++||++
T Consensus 363 LrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~ 442 (586)
T PLN02271 363 LRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKK 442 (586)
T ss_pred CCCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 46888875 2 6789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCC
Q psy10669 228 NASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGP 296 (337)
Q Consensus 228 na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~ 296 (337)
||++|++.|.+.||+|++|+||||+++||++..+++|..+++.|+++||.+|||. ||||||+++|+||+
T Consensus 443 NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~ 522 (586)
T PLN02271 443 NAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGC 522 (586)
T ss_pred HHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999987 99999999999999
Q ss_pred CHHHHHH------HHhh--------------C----CCcHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy10669 297 KLVDFQT------CLHK--------------N----EDIVKKVAALKKEIEDYSNQFEMPGQAD 336 (337)
Q Consensus 297 ~~~~~~~------~~~~--------------~----~~~~~~~~~lr~~V~~~~~~fp~p~~~~ 336 (337)
+.+||.+ .+++ + ..+.+++.++|++|++||++||+|++|.
T Consensus 523 ~e~d~~~iA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~V~~~~~~fp~p~~~~ 586 (586)
T PLN02271 523 LESDFETIADFLLRAAQIASAVQREHGKLQKEFLKGLQNNKDIVELRNRVEAFASQFAMPGFDV 586 (586)
T ss_pred CcHHHHHHHHHHHHHHhhhhhhhhhcchhhhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9777754 2222 1 0234568999999999999999998864
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=1.6e-76 Score=574.89 Aligned_cols=294 Identities=49% Similarity=0.756 Sum_probs=249.7
Q ss_pred hhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC
Q psy10669 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN 90 (337)
Q Consensus 11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg 90 (337)
|+++||||+++|++|.+||+++|+|||||||+||.|+++++|+|+|||++|+||.|||+||+++|++|.+|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------------------
Q psy10669 91 LDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------------------- 119 (337)
Q Consensus 91 ~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------------------- 119 (337)
+++.+|++||||+||++||++||.||++|
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999876
Q ss_pred --ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------ee-eec-----cCCc
Q psy10669 120 --NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VK-GVT-----KTGE 176 (337)
Q Consensus 120 --~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~-~T~-----~~Gg 176 (337)
+++ +||+||+|+|+|++++|+++|++|||++|++||+|+||.+|||++ ++ +|| |+||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 222 399999999999999999999999999999999999999999993 34 444 5799
Q ss_pred hhhhh----------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669 177 KILYD----------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240 (337)
Q Consensus 177 ~i~~~----------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G 240 (337)
+|++. +.++|++++||++||+||+|.+||++++++|+++++|++|++||++||++|++.|.+.|
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99865 78899999999999999999999999999999999999999999999999999999999
Q ss_pred CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHHHHH
Q psy10669 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQTC 304 (337)
Q Consensus 241 ~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~~~~ 304 (337)
|+|++++||||+++||+++.++++.+++++|+++||.+|+|. ||||||+++|+||++.+||.+.
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~i 395 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEI 395 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHH
T ss_pred cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999986 9999999999999999999864
No 5
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=4.1e-67 Score=519.31 Aligned_cols=321 Identities=33% Similarity=0.546 Sum_probs=289.2
Q ss_pred hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
+.|.++||||+++|++|.+||+++|+|||||||+||.|+++++++++|||++|+||.|||+||+++|++|.+|+++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeecCCCchhHHHHHHhhCC---------------------------------c----------------
Q psy10669 89 FNLDPEQWGCNVQPYSGSPANFAVCEKALP---------------------------------T---------------- 119 (337)
Q Consensus 89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~---------------------------------~---------------- 119 (337)
||+++ +||||+||++||++||.||++ +
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 799999999999999999983 1
Q ss_pred ------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 120 ------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 120 ------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+++ +|++||++.|+|++.+|+++|++||+++|++|+||+||++|+++
T Consensus 184 ~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig 263 (493)
T PRK13580 184 FRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVA 263 (493)
T ss_pred cccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchhhceec
Confidence 111 28899999999999999999999999999999999999999998
Q ss_pred e---------------eeeec------cCCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHH
Q psy10669 167 G---------------VKGVT------KTGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQA 223 (337)
Q Consensus 167 g---------------~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~ 223 (337)
+ +++|+ |.||+|++ ++.++++++ .|+++|+|++|.+||++++++++.+++|++|++
T Consensus 264 g~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~ 342 (493)
T PRK13580 264 GKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ 342 (493)
T ss_pred cccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhC-CCcccCCCccHHHHHHHHHHHHHhCccHHHHHH
Confidence 2 24554 35899987 688889877 599999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhH
Q psy10669 224 QVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQ 291 (337)
Q Consensus 224 ~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~ 291 (337)
|+++|+++|++.|.+.||++++++|+|||++|++++.+.++..+++.|+++||+||++. +||||+++.
T Consensus 343 ~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ 422 (493)
T PRK13580 343 QVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPAL 422 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchh
Confidence 99999999999999999999877799999999999988778899999999999999865 799999999
Q ss_pred hhhCCCHHHHHH------HHhhCC----------------CcHHHHHHHHHHHHHHHhcCCC-CCC
Q psy10669 292 AISGPKLVDFQT------CLHKNE----------------DIVKKVAALKKEIEDYSNQFEM-PGQ 334 (337)
Q Consensus 292 t~~G~~~~~~~~------~~~~~~----------------~~~~~~~~lr~~V~~~~~~fp~-p~~ 334 (337)
|+||++.+|+.. .++++. .+.+.++++|++|.+||.+||+ |++
T Consensus 423 ttrg~teedi~~iad~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~ 488 (493)
T PRK13580 423 TTLGMGSDEMDEVAELIVKVLSNTTPGTTAEGAPSKAKYELDEGVAQEVRARVAELLARFPLYPEI 488 (493)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHhhhhccccccccccccccCCHHHHHHHHHHHHHHHHhCCCCCcc
Confidence 999999887754 233321 1345688999999999999999 444
No 6
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=8.1e-66 Score=515.23 Aligned_cols=332 Identities=52% Similarity=0.840 Sum_probs=298.0
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHH
Q psy10669 4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQ 83 (337)
Q Consensus 4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~ 83 (337)
+.|++..|++.||||+++|++|.+||+++|+|||||||+||.|++++++.+++||++|+||+|||+||+.+|+||.+|++
T Consensus 8 ~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~ 87 (475)
T PLN03226 8 PKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQK 87 (475)
T ss_pred hhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHH
Confidence 34677789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------------
Q psy10669 84 RSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------------- 119 (337)
Q Consensus 84 ~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------------- 119 (337)
+++++|+++++.|++|+||+|||+||++++.+|+++
T Consensus 88 ~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~ 167 (475)
T PLN03226 88 RALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDEST 167 (475)
T ss_pred HHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCC
Confidence 999999999999999999999999999999999765
Q ss_pred ---------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec---
Q psy10669 120 ---------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT--- 172 (337)
Q Consensus 120 ---------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~--- 172 (337)
++. +||+||+++|+|||++|+++|++||+++|++|+||+||++|+++ .+++|+
T Consensus 168 g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~ 247 (475)
T PLN03226 168 GLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKS 247 (475)
T ss_pred CCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCccc
Confidence 111 28999998999999999999999999999999999999999997 134553
Q ss_pred ---cCCchhhh----------------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q psy10669 173 ---KTGEKILY----------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS 233 (337)
Q Consensus 173 ---~~Gg~i~~----------------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~ 233 (337)
|.||+|++ ++.++++++.||.++|+|+++.++|++++++++.++++++|++++++|+++|+
T Consensus 248 L~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~ 327 (475)
T PLN03226 248 LRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALA 327 (475)
T ss_pred ccCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH
Confidence 35888875 23447888999999999999999999999999988888999999999999999
Q ss_pred HHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHHH
Q psy10669 234 DEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQ 302 (337)
Q Consensus 234 ~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~~ 302 (337)
+.|.+.||++++++|++|+++|+++..++++.++++.|+++||.+|+|. |||+||+.+|+||++.+||.
T Consensus 328 ~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~ 407 (475)
T PLN03226 328 NRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFE 407 (475)
T ss_pred HHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHH
Confidence 9999999999998899999999999889999999999999999999974 99999999999999987765
Q ss_pred H------HHhh--------------CCC-----c--HHHHHHHHHHHHHHHhcCCCCCCC
Q psy10669 303 T------CLHK--------------NED-----I--VKKVAALKKEIEDYSNQFEMPGQA 335 (337)
Q Consensus 303 ~------~~~~--------------~~~-----~--~~~~~~lr~~V~~~~~~fp~p~~~ 335 (337)
+ .+++ +.. + .+.+.++|++|.+||++||+|+++
T Consensus 408 ~ia~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~~~ 467 (475)
T PLN03226 408 KVAEFLHRAVTIALKIQKEHGKKLKDFKKGLESNDFSKDIEALRAEVEEFATSFPMPGFD 467 (475)
T ss_pred HHHHHHHHHHHHhhhhhhhcccchhhhhhhccccccHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4 2222 100 1 356889999999999999999875
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=3.5e-53 Score=422.96 Aligned_cols=327 Identities=52% Similarity=0.869 Sum_probs=287.3
Q ss_pred hhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHh
Q psy10669 8 HGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLK 87 (337)
Q Consensus 8 ~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~ 87 (337)
+..|+++|||+++++.+|.+||+++|+|+||||++||.|++++.+.+.++|++|+||++++.|++..+.+|..|++++++
T Consensus 12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~ 91 (452)
T PTZ00094 12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE 91 (452)
T ss_pred hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------------------------
Q psy10669 88 AFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------------ 119 (337)
Q Consensus 88 lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------------ 119 (337)
+||+++.+|.++++|+|||.||++++.+|+++
T Consensus 92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~ 171 (452)
T PTZ00094 92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDY 171 (452)
T ss_pred HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCH
Confidence 99999888888999999999999999999654
Q ss_pred ----ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cC
Q psy10669 120 ----NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KT 174 (337)
Q Consensus 120 ----~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~ 174 (337)
+.. +|++|+++.|+|++.+|+++|.+||+++|++++||+||++|+++ .+++|+ |+
T Consensus 172 ~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~ 251 (452)
T PTZ00094 172 DKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPR 251 (452)
T ss_pred HHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCC
Confidence 000 37889988899999999999999999999999999999999995 234443 35
Q ss_pred Cchhhh--h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669 175 GEKILY--D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT 248 (337)
Q Consensus 175 Gg~i~~--~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t 248 (337)
||++++ + +.+.+++.+||.++|+++++.++|++++++++...++++|++++.+|+++|++.|.+.|+++.++++
T Consensus 252 Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~ 331 (452)
T PTZ00094 252 SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT 331 (452)
T ss_pred ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC
Confidence 777765 2 4556777889999999999999999999999977788999999999999999999999999987667
Q ss_pred CCeEEEEEecCCCcchHHHHHHHhhcCceeccC-----------cccchhhhhHhhhCCCHHHHHH------HHhhC---
Q psy10669 249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN-----------TGISLAAEIQAISGPKLVDFQT------CLHKN--- 308 (337)
Q Consensus 249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~-----------~girig~~~~t~~G~~~~~~~~------~~~~~--- 308 (337)
++|+++|+++..++++..+...|+++||.++++ .+||+|+...|++|++.+|+.. .++..
T Consensus 332 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~ 411 (452)
T PTZ00094 332 DNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQE 411 (452)
T ss_pred CCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 789999999988889999999999999999865 2899999999999999887654 22221
Q ss_pred ----------C-----CcHHHHHHHHHHHHHHHhcCCCCCC
Q psy10669 309 ----------E-----DIVKKVAALKKEIEDYSNQFEMPGQ 334 (337)
Q Consensus 309 ----------~-----~~~~~~~~lr~~V~~~~~~fp~p~~ 334 (337)
. .+..++.++|.+|.+||++||+|+.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 452 (452)
T PTZ00094 412 IQKQVGKKLVDFKKALEKNPELQKLRQEVVEFASQFPFPGI 452 (452)
T ss_pred hhhhcccchhhhhhhcccHHHHHHHHHHHHHHHHhCCCCCC
Confidence 0 1246689999999999999999974
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=5.1e-52 Score=410.52 Aligned_cols=323 Identities=44% Similarity=0.671 Sum_probs=282.3
Q ss_pred hhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS 85 (337)
Q Consensus 6 ~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~ 85 (337)
||.+.|+++||||+++|++|.+||+++|||+|||||+||.|++|+.+.+.++|+.|++|+|+++|+..++++|.+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred HhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------
Q psy10669 86 LKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------------- 119 (337)
Q Consensus 86 a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------------- 119 (337)
+++||.++ +.+.+.|||.||++++.+|+++
T Consensus 84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 159 (416)
T PRK13034 84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDE 159 (416)
T ss_pred HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHH
Confidence 99999997 4577899999999999999765
Q ss_pred --ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-e-----------eeeec------cCCc
Q psy10669 120 --NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-G-----------VKGVT------KTGE 176 (337)
Q Consensus 120 --~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-g-----------~~~T~------~~Gg 176 (337)
+.. +||+|++++++|++++|+++|.++|+++|++|++|+||++|+++ | +++|. +.||
T Consensus 160 le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~GG 239 (416)
T PRK13034 160 VEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRGG 239 (416)
T ss_pred HHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCCe
Confidence 000 27899998889999999999999999999999999999999986 1 23332 4588
Q ss_pred hhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE
Q psy10669 177 KILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI 253 (337)
Q Consensus 177 ~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v 253 (337)
++++ ++.++++..+|++++++++++.+++++.++.+++++++.+|++++++|+++|+++|.+.|+++..+++++|++
T Consensus 240 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~ 319 (416)
T PRK13034 240 MILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLL 319 (416)
T ss_pred EEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEE
Confidence 8876 3567788889999999999999999999999987666678999999999999999999999997545899999
Q ss_pred EEEecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHH
Q psy10669 254 LIDLRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKV 315 (337)
Q Consensus 254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~ 315 (337)
+|++++.+.+...+.++|+++||.++++. +||+|+.++|++|.+.+|+.. .++.+.++.+.+
T Consensus 320 ~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~~~~~~~ 399 (416)
T PRK13034 320 LVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDLGNAALE 399 (416)
T ss_pred EEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 99999988888888899999999998632 899999999999999877654 344443434457
Q ss_pred HHHHHHHHHHHhcCCCC
Q psy10669 316 AALKKEIEDYSNQFEMP 332 (337)
Q Consensus 316 ~~lr~~V~~~~~~fp~p 332 (337)
+++|++|.+|++.||++
T Consensus 400 ~~~~~~~~~~~~~~~~~ 416 (416)
T PRK13034 400 QRVRKEVKALCSRFPIY 416 (416)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 89999999999999975
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1.2e-38 Score=314.45 Aligned_cols=324 Identities=43% Similarity=0.659 Sum_probs=273.4
Q ss_pred hhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS 85 (337)
Q Consensus 6 ~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~ 85 (337)
||+..|++.|||++++|++|.+++++.|+|+++||+++|.|++++...+.++|+.|++|++++.|.+..+.+|..+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 80 (416)
T PRK00011 1 FFMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRA 80 (416)
T ss_pred CcchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999988878899999999999999999999999999999
Q ss_pred HhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------
Q psy10669 86 LKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------------- 119 (337)
Q Consensus 86 a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------------- 119 (337)
+++||+++ ..|.++|||.|+..++.+++++
T Consensus 81 a~~~g~~~----~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 156 (416)
T PRK00011 81 KELFGAEY----ANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDE 156 (416)
T ss_pred HHHhCCCc----eeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHH
Confidence 99999987 4588889999998888888654
Q ss_pred -c--c-c-cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCc
Q psy10669 120 -N--N-A-RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGE 176 (337)
Q Consensus 120 -~--~-a-~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg 176 (337)
+ + . +||+|+++.+++|+..|+++|.++|+++|+++++|+||.+|++. .+++++ ++||
T Consensus 157 l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~gg 236 (416)
T PRK00011 157 VEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRGG 236 (416)
T ss_pred HHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCce
Confidence 0 1 1 27899987789999999999999999999999999999998763 122332 3578
Q ss_pred hhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE
Q psy10669 177 KILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI 253 (337)
Q Consensus 177 ~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v 253 (337)
++++ ++.++++...+|+..+++..+.++++..++.+++....+++.+++.+|++++++.|.+.|+++..+++++|++
T Consensus 237 ~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 316 (416)
T PRK00011 237 LILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGGTDNHLV 316 (416)
T ss_pred EEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCCCCeEE
Confidence 7775 4777887777888888899999999999988876545588999999999999999999999887545678999
Q ss_pred EEEecCCCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHH
Q psy10669 254 LIDLRKNKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKV 315 (337)
Q Consensus 254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~ 315 (337)
++.+++.+.+..++.+.|.+.||.++.. .++|+|+...+++|++.+|+.. .++.++.+.+++
T Consensus 317 ~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~~~~~~~~ 396 (416)
T PRK00011 317 LVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDNPDDEAVI 396 (416)
T ss_pred EEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhccCcchhH
Confidence 9999766667788889999899999831 1799999998889988766543 344554445779
Q ss_pred HHHHHHHHHHHhcCCCCC
Q psy10669 316 AALKKEIEDYSNQFEMPG 333 (337)
Q Consensus 316 ~~lr~~V~~~~~~fp~p~ 333 (337)
.++|+||.+|+++||.+.
T Consensus 397 ~~~~~~~~~~~~~~~~~~ 414 (416)
T PRK00011 397 EEVKEEVKELCKRFPLYK 414 (416)
T ss_pred HHHHHHHHHHHHhCCCCC
Confidence 999999999999999765
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=5.2e-35 Score=286.76 Aligned_cols=310 Identities=45% Similarity=0.694 Sum_probs=257.8
Q ss_pred hhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669 12 AQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL 91 (337)
Q Consensus 12 ~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~ 91 (337)
+++|+|++++|.+|.++|+++|+|+|+||+++|.|++++...+..+|+.|++|+++|.|....+++|..++++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~ 80 (402)
T cd00378 1 ADVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA 80 (402)
T ss_pred CCcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999999999998888899999999999999999999999888899999999
Q ss_pred CCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------c--------------
Q psy10669 92 DPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------N-------------- 120 (337)
Q Consensus 92 ~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------~-------------- 120 (337)
++ ..|.++||+.|+..++.+++++ .
T Consensus 81 ~~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~ 156 (402)
T cd00378 81 EY----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKM 156 (402)
T ss_pred Cc----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHH
Confidence 86 4688889999999999998654 0
Q ss_pred c--ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeee------ccCCchhhh
Q psy10669 121 N--ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGV------TKTGEKILY 180 (337)
Q Consensus 121 ~--a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T------~~~Gg~i~~ 180 (337)
. .+|++|+++.+++++..|+++|.++|+++|+++++|++|..|++. .++++ +++||++++
T Consensus 157 i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i~~ 236 (402)
T cd00378 157 ALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLILT 236 (402)
T ss_pred HHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEEEe
Confidence 0 027899988888999999999999999999999999999888753 12222 235777765
Q ss_pred ---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEe
Q psy10669 181 ---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL 257 (337)
Q Consensus 181 ---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~ 257 (337)
++.+++.....|+..++++++.+++++.++.+.....++++++++.++++++.+.|.+.|+++......+|++++++
T Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~ 316 (402)
T cd00378 237 RKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDL 316 (402)
T ss_pred ccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeC
Confidence 57777777667888889999999999999988765467889999999999999999999999875446799999999
Q ss_pred cCCCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHHH
Q psy10669 258 RKNKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAALK 319 (337)
Q Consensus 258 ~~~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~lr 319 (337)
.+.+.+...+.+.|++.||.+++. .++|||+...|+.|++.+|+.. .++++.++..+.+.++
T Consensus 317 ~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~~~~~~~~~~ 396 (402)
T cd00378 317 RPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAEDVAVAEEVR 396 (402)
T ss_pred CccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhcccchhhHHHHH
Confidence 866667778888899999999731 2799999999999999887654 2334433233568899
Q ss_pred HHHHHH
Q psy10669 320 KEIEDY 325 (337)
Q Consensus 320 ~~V~~~ 325 (337)
++|.+|
T Consensus 397 ~~~~~~ 402 (402)
T cd00378 397 KEVAEL 402 (402)
T ss_pred HHHhcC
Confidence 998764
No 11
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-32 Score=265.50 Aligned_cols=236 Identities=17% Similarity=0.210 Sum_probs=198.9
Q ss_pred cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
+.+..++||||+ +|.+++++... ..+|+.|.+|+|.+.|+..+ .+|| +++++|||.+. ++.|+||
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~-~~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SG 108 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAA-IRRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSG 108 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHH-HHHhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEccc
Confidence 567899999999 99999999876 66899999999999999776 6899 58899999996 7999999
Q ss_pred chhHHHHHHhhCCc--------------------------------------cccc----c--cEEEEcCcccccccChH
Q psy10669 106 SPANFAVCEKALPT--------------------------------------NNAR----F--DFLSSGTTCYSRCLDYA 141 (337)
Q Consensus 106 t~AN~~v~~aLl~~--------------------------------------~~a~----p--klII~~~S~~~~~~d~~ 141 (337)
|.||++++.+|+++ .+.+ + +.+|+++|+|||++|++
T Consensus 109 y~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA 188 (388)
T COG0156 109 FVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA 188 (388)
T ss_pred chhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC
Confidence 99999999999875 1111 1 46666679999999999
Q ss_pred HHH---HHhhhcCCeEEEeccccccccc----e--------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669 142 RFR---QICDETDSIMFADMSHISGLIA----G--------------VKGVT-K----TGEKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 142 ~l~---eia~~~ga~l~vD~AH~~Gli~----g--------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~ 193 (337)
+|+ ++|++||++|+||+||+.|++| | +++|. | .||++++ .+.+.+.....|+
T Consensus 189 pL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~L~~~ar~~ 268 (388)
T COG0156 189 PLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYLRNRARPF 268 (388)
T ss_pred CHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHHHHHhCCce
Confidence 877 5678999999999999999999 1 34554 2 4899987 5788777767999
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
+++|..+|.+++.+.+..+++ .++.+.++++++|++.++..+...|+.+.. +++||++|.+++.. ...+++..|.+
T Consensus 269 ifStalpP~~aaa~~~al~~l-~~~~~~r~~L~~~~~~~~~~~~~~~~~~~~--s~s~I~pv~~gd~~-~a~~~s~~l~~ 344 (388)
T COG0156 269 IFSTALPPAVAAAALAALRIL-EEGPERRERLQELAAFFRSLLKALGLVLLP--SESPIIPVILGDEE-RALEASRALLE 344 (388)
T ss_pred eccCCCCHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHhcCCccCC--CCCCeeeeEeCCHH-HHHHHHHHHHH
Confidence 999999999998888888876 478999999999999999888888998744 89999999999877 56666777776
Q ss_pred cCceecc
Q psy10669 274 IAIACNK 280 (337)
Q Consensus 274 ~gI~v~~ 280 (337)
.||++..
T Consensus 345 ~Gi~v~~ 351 (388)
T COG0156 345 EGIYVSA 351 (388)
T ss_pred CCeeEee
Confidence 6999985
No 12
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=1e-26 Score=230.95 Aligned_cols=233 Identities=13% Similarity=0.091 Sum_probs=187.0
Q ss_pred ccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669 30 INGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S 104 (337)
.+.+..++||||+ +|.++++.... ..+|+.|..|+|.+.|+... .++| +++++|||.++ ++.++|
T Consensus 101 ~r~~l~FsSndYLGL~~~p~v~~a~~~a-i~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sS 170 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSSHPTISNAAANA-AKEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPT 170 (476)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHH-HHHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECC
Confidence 4567899999999 99999999865 67999999999999999555 5799 58899999997 799999
Q ss_pred CchhHHHHHHhhC--------------Cc------------------------------------------ccc--c-cc
Q psy10669 105 GSPANFAVCEKAL--------------PT------------------------------------------NNA--R-FD 125 (337)
Q Consensus 105 gt~AN~~v~~aLl--------------~~------------------------------------------~~a--~-pk 125 (337)
||.||++++.+|+ .+ .+. + .+
T Consensus 171 Gy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~ 250 (476)
T PLN02955 171 GFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCKMKR 250 (476)
T ss_pred hHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCCCCc
Confidence 9999999999872 11 000 1 13
Q ss_pred EEEEcCcccccccChHHH---HHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh
Q psy10669 126 FLSSGTTCYSRCLDYARF---RQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY 180 (337)
Q Consensus 126 lII~~~S~~~~~~d~~~l---~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~ 180 (337)
.+|+.+++|+|++|++++ .+||+++|++|+||+||+.|+++ | +++|. | .||++++
T Consensus 251 ~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~GGfi~g 330 (476)
T PLN02955 251 KVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHGGFIAC 330 (476)
T ss_pred eEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccCceeec
Confidence 445557899999998754 57899999999999999999998 1 24554 3 4899987
Q ss_pred --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR 258 (337)
Q Consensus 181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~ 258 (337)
++.+.++..-.+.++|++.++.+++.+.+..++.. ..++.++++++|+++|++. .|+++ .+||++|.++
T Consensus 331 s~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~-~~~~~r~~L~~n~~~fr~~---~G~~~-----~sPI~pI~ig 401 (476)
T PLN02955 331 SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVAR-KEKWRRKAIWERVKEFKAL---SGVDI-----SSPIISLVVG 401 (476)
T ss_pred HHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHh---cCCCC-----CCCEEEEEeC
Confidence 57788887667888999998888887777666653 3467899999999999984 47754 4899999998
Q ss_pred CCCcchHHHHHHHhhcCceeccCc
Q psy10669 259 KNKLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 259 ~~~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
+.. ...++.+.|.+.||+|+...
T Consensus 402 ~~~-~a~~~~~~L~~~Gi~v~~i~ 424 (476)
T PLN02955 402 NQE-KALKASRYLLKSGFHVMAIR 424 (476)
T ss_pred CHH-HHHHHHHHHHHCCCEEEEEC
Confidence 876 67788899999999998544
No 13
>KOG1359|consensus
Probab=99.94 E-value=2.6e-26 Score=210.16 Aligned_cols=235 Identities=17% Similarity=0.187 Sum_probs=193.1
Q ss_pred cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHH-HHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFID-EIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~-~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
..|.+++.|||+ +|++.+|-... ...|+.|..+.|+++|++.++ .|| ..+++|.+.|+ ++..+|+
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~a-leeyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypsc 136 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKA-LEEYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSC 136 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHH-HHHhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccc
Confidence 467889999999 99999998875 568999999999999999886 677 57899999997 6999999
Q ss_pred chhHHHHHHhhCCc-------------------------------------cccc--ccEEEEcCcccccccChHHHHHH
Q psy10669 106 SPANFAVCEKALPT-------------------------------------NNAR--FDFLSSGTTCYSRCLDYARFRQI 146 (337)
Q Consensus 106 t~AN~~v~~aLl~~-------------------------------------~~a~--pklII~~~S~~~~~~d~~~l~ei 146 (337)
+.||.+++-+++.| +..+ -|+|+ +.++||||+|++++.+|
T Consensus 137 fdANag~feail~pedAvfSDeLNhASIIdGirLckry~h~dv~~l~~~l~~a~k~r~klv~-TDg~FSMDGdiaPl~ei 215 (417)
T KOG1359|consen 137 FDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVDVFDLEHCLISACKMRLKLVV-TDGVFSMDGDIAPLEEI 215 (417)
T ss_pred cccchHHHHHhcChhhhhhccccccchhhhhhHHHhhhccchhHHHHHHHHHhhhheEEEEE-ecceeccCCCcccHHHH
Confidence 99999999999876 0012 35555 56899999999988765
Q ss_pred ---hhhcCCeEEEeccccccccc----e-------------eeeec------cCCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669 147 ---CDETDSIMFADMSHISGLIA----G-------------VKGVT------KTGEKILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 147 ---a~~~ga~l~vD~AH~~Gli~----g-------------~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
+++||++|++|++|..|+.+ | +.+|. ..||++.+ .+...+++.-+|+++++.
T Consensus 216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~~li~llrqr~RpylFSns 295 (417)
T KOG1359|consen 216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPKPLISLLRQRSRPYLFSNS 295 (417)
T ss_pred HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCChhHHHHHHhcCCceeecCC
Confidence 58999999999999999998 1 13553 25899987 689999988899999999
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
.+|.+.+.+.+...++- .-.+..+.+..|.+.+++.+...||++.+ .+.+|.+|.+++..+. ..+++.|-+.||+|
T Consensus 296 lppavV~~a~ka~dllm-~s~~~i~~~~a~~qrfr~~me~aGftIsg--~~hPI~pv~lGda~lA-~~~ad~lLk~Gi~V 371 (417)
T KOG1359|consen 296 LPPAVVGMAAKAYDLLM-VSSKEIQSRQANTQRFREFMEAAGFTISG--ASHPICPVMLGDARLA-SKMADELLKRGIYV 371 (417)
T ss_pred CChhhhhhhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCceecC--CCCCccceecccHHHH-HHHHHHHHhcCceE
Confidence 99999888887777653 33566788889999999999999999976 6677999999987744 45556666669998
Q ss_pred cc
Q psy10669 279 NK 280 (337)
Q Consensus 279 ~~ 280 (337)
-.
T Consensus 372 ig 373 (417)
T KOG1359|consen 372 IG 373 (417)
T ss_pred Ee
Confidence 63
No 14
>KOG1360|consensus
Probab=99.94 E-value=5e-26 Score=215.30 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=194.0
Q ss_pred cccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 29 QINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 29 q~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
-+..+..|+||+|+ +|.|++|+... .++|+.|..|.|.++|+... -+|| ..+++|.+.+. .+.|+
T Consensus 169 t~k~VtVWCSNDYLgms~Hp~V~~A~~~t-l~~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~a-----ALlFs 238 (570)
T KOG1360|consen 169 TEKKVTVWCSNDYLGMSRHPEVLDAMHDT-LDRHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEA-----ALLFS 238 (570)
T ss_pred ccCceEEEecCccccccCChHHHHHHHHH-HHHcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcc-----eeeee
Confidence 34679999999999 99999999876 67999999999999999555 6999 47789999885 79999
Q ss_pred CCchhHHHHHHhhCCc---------------------------------------c-cc---c--ccEEEEcCccccccc
Q psy10669 104 SGSPANFAVCEKALPT---------------------------------------N-NA---R--FDFLSSGTTCYSRCL 138 (337)
Q Consensus 104 Sgt~AN~~v~~aLl~~---------------------------------------~-~a---~--pklII~~~S~~~~~~ 138 (337)
|++.||-+++..|.+. + ++ + ||+|-+ +|+|||++
T Consensus 239 SCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAF-EtVhSM~G 317 (570)
T KOG1360|consen 239 SCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAF-ETVHSMDG 317 (570)
T ss_pred eeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEE-eeeeccCC
Confidence 9999999999988432 1 11 1 888877 58999999
Q ss_pred ChHHHHHHh---hhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccC
Q psy10669 139 DYARFRQIC---DETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVF 191 (337)
Q Consensus 139 d~~~l~eia---~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~ 191 (337)
.+.+|.||| ++|||+..+|+-|..||.| | +++|. | .||+|.. +|.+.+++..-
T Consensus 318 avcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAa 397 (570)
T KOG1360|consen 318 AVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAA 397 (570)
T ss_pred CcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccccceehhhhhHHHHHHHhcC
Confidence 888877665 7899999999999999999 1 24554 2 4899986 79999987655
Q ss_pred CCCCCCCcHHH-HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHH
Q psy10669 192 PSLQGGPHNHA-IGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 192 p~~~g~~~~~~-iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
.++++|..||. +++...+...+...++...+++-.+|.+++.+.|.+.|+.|.. ..+||+||.+++..+ ..++++.
T Consensus 398 GFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~--~pSHIiPv~vgda~l-~~~~sd~ 474 (570)
T KOG1360|consen 398 GFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP--NPSHIIPVRVGDAAL-AKQASDI 474 (570)
T ss_pred ceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC--CCcceeeeeccCHHH-HHHHHHH
Confidence 55555555554 5555555655556678899999999999999999999999987 899999999998774 4556665
Q ss_pred Hh-hcCceeccCc
Q psy10669 271 LE-EIAIACNKNT 282 (337)
Q Consensus 271 L~-~~gI~v~~~~ 282 (337)
|- +.||+|..+.
T Consensus 475 Li~~h~iYvQaIN 487 (570)
T KOG1360|consen 475 LISKHNIYVQAIN 487 (570)
T ss_pred HHHhcCeEEEecc
Confidence 55 6899998655
No 15
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.87 E-value=2.3e-20 Score=183.75 Aligned_cols=234 Identities=16% Similarity=0.193 Sum_probs=169.8
Q ss_pred cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
+.+..++|+||+ +|.|.+++... ..+|+.|+.|+|.+.|. ....++| +++++++|.+. .+.++||
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~-~~~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG 115 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEA-LDRCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSG 115 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHH-HHHcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcH
Confidence 457789999999 99999999865 45788888888888775 4456777 57789999754 6889999
Q ss_pred chhHHHHHHhhCC--c-------------------------------------c-cc-----cccEEEEcCccccccc--
Q psy10669 106 SPANFAVCEKALP--T-------------------------------------N-NA-----RFDFLSSGTTCYSRCL-- 138 (337)
Q Consensus 106 t~AN~~v~~aLl~--~-------------------------------------~-~a-----~pklII~~~S~~~~~~-- 138 (337)
+.||.+++..+.. + + +. ++++|++. +.+++.+
T Consensus 116 ~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~-~v~s~~G~~ 194 (407)
T PRK09064 116 YVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFE-SVYSMDGDI 194 (407)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEe-CCCCCCccc
Confidence 9999998888753 2 0 11 24677775 5777665
Q ss_pred -ChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669 139 -DYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 139 -d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~ 193 (337)
|+++|.++|+++|++|+||+||+.|+++ + +++|. | .||++++ ++.+.+.....|.
T Consensus 195 ~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~~ 274 (407)
T PRK09064 195 APIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGF 274 (407)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccCceEecCHHHHHHHHHhCccc
Confidence 6778889999999999999999988765 1 22343 2 3788776 5666665443444
Q ss_pred CCC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 194 LQG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 194 ~~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
.++ +.++...++...++..+. +.+..++++.++.++|.+.|.+.|++++. +.++++++.++.. ..+.++.+.|.
T Consensus 275 ~~t~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~iv~i~~~~~-~~~~~l~~~L~ 349 (407)
T PRK09064 275 IFTTSLPPAIAAAALASIRHLK--ESNEERERHQERAAKLKAALDAAGIPVMP--NESHIVPVMVGDP-EKCKKASDMLL 349 (407)
T ss_pred cccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEeCCH-HHHHHHHHHHH
Confidence 433 344455556556665553 23556789999999999999999998875 5678888877542 24566777764
Q ss_pred -hcCceecc
Q psy10669 273 -EIAIACNK 280 (337)
Q Consensus 273 -~~gI~v~~ 280 (337)
+.||.+..
T Consensus 350 ~~~gi~v~~ 358 (407)
T PRK09064 350 EEHGIYVQP 358 (407)
T ss_pred HhCCEEEee
Confidence 57999975
No 16
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.86 E-value=5.8e-20 Score=180.67 Aligned_cols=234 Identities=17% Similarity=0.201 Sum_probs=169.3
Q ss_pred cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
+.+..++||||+ +|.|++++... ..+|+.|+.|+|.+.|+. ...++| +++++++|.+. .+.++||
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~-~~~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG 114 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHET-LDKYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSG 114 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHH-HHHcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECch
Confidence 457789999999 99999999876 568888989999888875 446777 57889999764 6999999
Q ss_pred chhHHHHHHhhCC--c-------------------------------------c-cc-----cccEEEEcCcccc---cc
Q psy10669 106 SPANFAVCEKALP--T-------------------------------------N-NA-----RFDFLSSGTTCYS---RC 137 (337)
Q Consensus 106 t~AN~~v~~aLl~--~-------------------------------------~-~a-----~pklII~~~S~~~---~~ 137 (337)
+.||.+++..+.. + + +. ++++|++. +.++ ..
T Consensus 115 ~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e-~~~~~~G~~ 193 (402)
T TIGR01821 115 YVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFE-SVYSMDGDI 193 (402)
T ss_pred HHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEc-CCCCCCCCc
Confidence 9999999888753 2 0 00 14677765 4554 55
Q ss_pred cChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669 138 LDYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 138 ~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~ 193 (337)
.|+++|.++|+++|++|++|++|+.|+++ | +++|. | .||++++ ++.+.+.....+.
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~~ 273 (402)
T TIGR01821 194 APIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGF 273 (402)
T ss_pred cCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcCc
Confidence 57778889999999999999999988865 1 12233 2 3787765 5666665433343
Q ss_pred C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 194 L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 194 ~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
. .++.++..+++...++..+.+ .++.+++..++.++|++.|++.|+++.. +.++++++.++... ...++.+.|.
T Consensus 274 ~~t~~~~~~~~aaa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~i~~i~~~~~~-~a~~~~~~L~ 348 (402)
T TIGR01821 274 IFTTSLPPAIAAGATASIRHLKE--SQDLRRAHQENVKRLKNLLEALGIPVIP--NPSHIVPVIIGDAA-LCKKVSDLLL 348 (402)
T ss_pred eecCcCCHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEeCCHH-HHHHHHHHHH
Confidence 3 334555566666666666542 3566777889999999999999998765 57888888765322 3456777764
Q ss_pred -hcCceecc
Q psy10669 273 -EIAIACNK 280 (337)
Q Consensus 273 -~~gI~v~~ 280 (337)
+.||.+..
T Consensus 349 ~~~Gi~v~~ 357 (402)
T TIGR01821 349 NKHGIYVQP 357 (402)
T ss_pred hcCCEEEEe
Confidence 57999875
No 17
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=2.9e-19 Score=176.09 Aligned_cols=234 Identities=14% Similarity=0.181 Sum_probs=169.8
Q ss_pred cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
+.+.+++||||+ +|+|++++... ..+|+.|+.++|...|+. ...++| +++++++|.+. .+.++||
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~-~~~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG 114 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEA-LDTCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSG 114 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHH-HHHcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCc
Confidence 457789999999 99999999876 457888888899888764 446777 58899999864 7999999
Q ss_pred chhHHHHHHhhCC--c----------------------------------------ccc---cccEEEEcCcccc---cc
Q psy10669 106 SPANFAVCEKALP--T----------------------------------------NNA---RFDFLSSGTTCYS---RC 137 (337)
Q Consensus 106 t~AN~~v~~aLl~--~----------------------------------------~~a---~pklII~~~S~~~---~~ 137 (337)
+.||.+++.++.. + +.. ++++|++. +.++ ..
T Consensus 115 ~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~-~v~~~~G~~ 193 (406)
T PRK13393 115 YVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFE-SVYSMDGDI 193 (406)
T ss_pred HHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEc-CCCCCCCch
Confidence 9999999987753 1 000 14567665 4554 55
Q ss_pred cChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669 138 LDYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 138 ~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~ 193 (337)
.|+++|.++|+++|+++++|++|+.|+++ | +.+|. | .||++++ ++.+.+.....++
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~~ 273 (406)
T PRK13393 194 APIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASGF 273 (406)
T ss_pred hCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcCc
Confidence 57778889999999999999999999876 1 11233 2 3788775 5666666544454
Q ss_pred CC-CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 194 LQ-GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 194 ~~-g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
.+ ++.+++..++...++..+.+ ....++++.++.++|.+.|.+.|++++. +++++++|.+++. .+..++.+.|.
T Consensus 274 ~~t~~~~p~~~aa~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~i~~v~~~~~-~~~~~l~~~L~ 348 (406)
T PRK13393 274 IFTTSLPPAVAAGALASVRHLKA--SSAERERHQDRVARLRARLDKAGIPHLP--NPSHIVPVMVGDP-VLCKQISDELL 348 (406)
T ss_pred eecCccCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCeEEEEeCCH-HHHHHHHHHHH
Confidence 43 45566667777777766532 2344677889999999999999988764 5777888876432 24566777776
Q ss_pred h-cCceecc
Q psy10669 273 E-IAIACNK 280 (337)
Q Consensus 273 ~-~gI~v~~ 280 (337)
+ .||.+..
T Consensus 349 ~~~Gi~v~~ 357 (406)
T PRK13393 349 DRYGIYVQP 357 (406)
T ss_pred HhCCEEEEe
Confidence 5 6999875
No 18
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.84 E-value=5.7e-19 Score=174.16 Aligned_cols=233 Identities=15% Similarity=0.170 Sum_probs=169.7
Q ss_pred ceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc
Q psy10669 32 GIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS 106 (337)
Q Consensus 32 ~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt 106 (337)
....++|+||+ +|.|++++... ..+|+.|..++|.+.|.. ...++| +++++++|.++ .+.++||+
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~-~~~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~ 116 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDA-LDRYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGY 116 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHH-HHHcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHH
Confidence 46689999999 99999999865 467888888888888874 456777 58899999764 69999999
Q ss_pred hhHHHHHHhhCC--c--------------------------------------ccc-----cccEEEEcCccc---cccc
Q psy10669 107 PANFAVCEKALP--T--------------------------------------NNA-----RFDFLSSGTTCY---SRCL 138 (337)
Q Consensus 107 ~AN~~v~~aLl~--~--------------------------------------~~a-----~pklII~~~S~~---~~~~ 138 (337)
.||..++.++.. + .+. ++++|++. +.+ +...
T Consensus 117 ~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~-~~~n~tG~~~ 195 (410)
T PRK13392 117 VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFE-SVYSMDGDIA 195 (410)
T ss_pred HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEe-CCCCCCcccc
Confidence 999998887742 2 000 25677775 333 4566
Q ss_pred ChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCCC
Q psy10669 139 DYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPSL 194 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~ 194 (337)
|+++|.++|+++|+++++|++|..|+++ | +++|. | .||++++ ++.+.+.....|..
T Consensus 196 ~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~~~ 275 (410)
T PRK13392 196 PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFI 275 (410)
T ss_pred cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcchh
Confidence 7888999999999999999999988864 1 12343 2 3788875 56665554433433
Q ss_pred CCC-CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH-h
Q psy10669 195 QGG-PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-E 272 (337)
Q Consensus 195 ~g~-~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~ 272 (337)
.++ .+++..+++..++..+. ...+.++++.++.++|.+.|.+.|+++.. ++++++++.++.. .+..++.+.| +
T Consensus 276 ~s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~i~~~~~-~~~~~~~~~L~~ 350 (410)
T PRK13392 276 FTTALPPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNANGIPVMP--SPSHIVPVMVGDP-TLCKAISDRLMS 350 (410)
T ss_pred ccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEeCCH-HHHHHHHHHHHH
Confidence 333 44455666666776553 34567788999999999999999998864 6788887877532 2456677776 5
Q ss_pred hcCceecc
Q psy10669 273 EIAIACNK 280 (337)
Q Consensus 273 ~~gI~v~~ 280 (337)
+.||.+..
T Consensus 351 ~~GI~v~~ 358 (410)
T PRK13392 351 EHGIYIQP 358 (410)
T ss_pred hCCEEEee
Confidence 68999985
No 19
>PLN02483 serine palmitoyltransferase
Probab=99.81 E-value=4.9e-18 Score=171.45 Aligned_cols=238 Identities=15% Similarity=0.131 Sum_probs=170.1
Q ss_pred cceeeeccCCCC-----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669 31 NGIELIASENFT-----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS 104 (337)
Q Consensus 31 ~~i~l~asen~~-----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S 104 (337)
+....++|+||+ ++.+.++.... ..+|+.|+.++|...|+ ..+.++| +++++++|.++ ++.+++
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~a-i~~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~ 169 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIES-LKKYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGM 169 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHH-HHHhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECC
Confidence 345688999999 35555555544 45788888899987775 5557888 58899999875 799999
Q ss_pred CchhHHHHHHhhCCc-------------------------------------c-c--c------c---c--cEEEEcCcc
Q psy10669 105 GSPANFAVCEKALPT-------------------------------------N-N--A------R---F--DFLSSGTTC 133 (337)
Q Consensus 105 gt~AN~~v~~aLl~~-------------------------------------~-~--a------~---p--klII~~~S~ 133 (337)
|+.+|++++.+|+++ + + + + | +++|+.+++
T Consensus 170 G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v 249 (489)
T PLN02483 170 GYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI 249 (489)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence 999999999999765 0 0 0 1 1 556666788
Q ss_pred ccccc---ChHHHHHHhhhcCCeEEEeccccccccc------------------eeeeecc-----CCchhhh--hHHHH
Q psy10669 134 YSRCL---DYARFRQICDETDSIMFADMSHISGLIA------------------GVKGVTK-----TGEKILY--DYEEK 185 (337)
Q Consensus 134 ~~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~~-----~Gg~i~~--~l~~~ 185 (337)
|++.+ |+++|.++|+++|++|++|++|+.|.++ .+++|+. .||++++ ++.+.
T Consensus 250 ~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i~~~~~li~~ 329 (489)
T PLN02483 250 YSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQY 329 (489)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEEEcCHHHHHH
Confidence 98886 6667888999999999999999977653 1244543 4898876 67777
Q ss_pred HhhccCCCCC-CCCcHHHHHHHHHHHHHHhch----hhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC
Q psy10669 186 INNAVFPSLQ-GGPHNHAIGAIATAMLQAQSD----EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN 260 (337)
Q Consensus 186 i~~~~~p~~~-g~~~~~~iaala~a~~e~~~~----~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~ 260 (337)
+.....+..+ ++.+++.+++...++..+... ...+.++++.+|.++|.+.|.+.|+.+.+ ..+++++++-+...
T Consensus 330 l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~-~~~sp~~~l~l~~~ 408 (489)
T PLN02483 330 LKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLG-DNDSPVMPIMLYNP 408 (489)
T ss_pred HHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccC-CCCCCEEEEEECCH
Confidence 7765443333 345666666666666655422 23567889999999999999999998764 34567777765433
Q ss_pred CcchHHHHHHHhhcCceecc
Q psy10669 261 KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~ 280 (337)
. ...++.+.|.+.||.+.+
T Consensus 409 ~-~~~~~~~~Ll~~GI~v~~ 427 (489)
T PLN02483 409 A-KIPAFSRECLKQNVAVVV 427 (489)
T ss_pred H-HHHHHHHHHHHCCcEEee
Confidence 2 445666777777999874
No 20
>PRK07179 hypothetical protein; Provisional
Probab=99.81 E-value=7.8e-18 Score=165.93 Aligned_cols=233 Identities=15% Similarity=0.210 Sum_probs=167.8
Q ss_pred cccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCC-cCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 29 QINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGK-RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 29 q~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~-r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
....+..++|++|+ +|.|++++...+ .+|+.+..++ .+..|.....++| +++++++|.++ .+.++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~-~~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~ 121 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAAL-QEEGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES-----CLLCQ 121 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHH-HHhCCCCCccccccCCchHHHHHH----HHHHHHhCCCc-----EEEEC
Confidence 44467789999999 899999998764 4665444434 4444445557888 58899999976 57788
Q ss_pred CCchhHHHHHHhhCCc-------------------------------------c-cc--cccEEEEcCccc---ccccCh
Q psy10669 104 SGSPANFAVCEKALPT-------------------------------------N-NA--RFDFLSSGTTCY---SRCLDY 140 (337)
Q Consensus 104 Sgt~AN~~v~~aLl~~-------------------------------------~-~a--~pklII~~~S~~---~~~~d~ 140 (337)
||+.||.+++.+++.+ + +. +|++|++. +.+ +...|+
T Consensus 122 sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~-~v~n~tG~i~pl 200 (407)
T PRK07179 122 SGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVD-SVYSTTGTIAPL 200 (407)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEEC-CCCCCCCccccH
Confidence 9999999999998754 1 01 15677775 454 567778
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc----------e-------eeeec-c----CCchhhh--hHHHHHhhccCCCC-C
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA----------G-------VKGVT-K----TGEKILY--DYEEKINNAVFPSL-Q 195 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~ 195 (337)
++|.++|+++|++|++|++|+.|..+ + +++|. | ++|++++ ++.+.+.....|.. .
T Consensus 201 ~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~ 280 (407)
T PRK07179 201 ADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFS 280 (407)
T ss_pred HHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeC
Confidence 88899999999999999999987643 1 12333 2 4677765 56566654445555 3
Q ss_pred CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
+++.++.++++..++..+. ..++.++++.++.++|.+.|.+.|+++.+ .++++++.+.... ++..+.+.|.+.|
T Consensus 281 ~t~~~~~~aa~~aal~~~~--~~~~~~~~l~~~~~~l~~~L~~~g~~v~~---~~~i~~l~~~~~~-~~~~~~~~L~~~G 354 (407)
T PRK07179 281 STLLPHEIAGLEATLEVIE--SADDRRARLHANARFLREGLSELGYNIRS---ESQIIALETGSER-NTEVLRDALEERN 354 (407)
T ss_pred CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCC---CCCEEEEEeCCHH-HHHHHHHHHHHCC
Confidence 5667777887777776653 34678899999999999999999998763 4678877765422 4567778888889
Q ss_pred cee
Q psy10669 276 IAC 278 (337)
Q Consensus 276 I~v 278 (337)
|.+
T Consensus 355 I~~ 357 (407)
T PRK07179 355 VFG 357 (407)
T ss_pred ceE
Confidence 974
No 21
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.80 E-value=7e-18 Score=165.92 Aligned_cols=233 Identities=13% Similarity=0.053 Sum_probs=166.9
Q ss_pred eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669 35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109 (337)
Q Consensus 35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN 109 (337)
.++|+||+ +|+++++.... ..+|+.|+.|+|.+.|+.. +.++| +++++++|.++ ++.++||+.||
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a-~~~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~ 71 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALES-LSHYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTT 71 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHH-HHHhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHH
Confidence 47899999 99999999876 5689999999999877644 46888 58899999986 79999999999
Q ss_pred HHHHHhhCCc-----------------------------------------cc----------c--cccEEEEcCcccc-
Q psy10669 110 FAVCEKALPT-----------------------------------------NN----------A--RFDFLSSGTTCYS- 135 (337)
Q Consensus 110 ~~v~~aLl~~-----------------------------------------~~----------a--~pklII~~~S~~~- 135 (337)
++++.+++++ .. . ++++|++. +.++
T Consensus 72 ~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E-~v~~~ 150 (392)
T PLN03227 72 SSTVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVE-GLYKN 150 (392)
T ss_pred HHHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEc-CCcCC
Confidence 9999999765 00 0 14566664 5654
Q ss_pred --cccChHHHHHHhhhcCCeEEEeccccccccc----------e---------eeeec-----cCCchhhh--hHHHHHh
Q psy10669 136 --RCLDYARFRQICDETDSIMFADMSHISGLIA----------G---------VKGVT-----KTGEKILY--DYEEKIN 187 (337)
Q Consensus 136 --~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------g---------~~~T~-----~~Gg~i~~--~l~~~i~ 187 (337)
...|++++.++|+++|++|++|++|+.|.++ | ++++. +.||++++ ++.+.+.
T Consensus 151 ~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~ 230 (392)
T PLN03227 151 TGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQR 230 (392)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHH
Confidence 5556677889999999999999999988764 0 12221 34676655 5555554
Q ss_pred hccCCCCCCCCcHH-HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec---------CCCCCeEEEEEe
Q psy10669 188 NAVFPSLQGGPHNH-AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT---------GGTDVHLILIDL 257 (337)
Q Consensus 188 ~~~~p~~~g~~~~~-~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~---------~~t~~h~v~V~~ 257 (337)
......++|++.+| ..++...++..+.+ .++..+++.++.++|++.|.+.++..+. +.++++++.|.+
T Consensus 231 ~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~ 308 (392)
T PLN03227 231 LSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRL 308 (392)
T ss_pred HhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEe
Confidence 33334456665444 34444445656543 4678999999999999999987665321 235789999998
Q ss_pred cCCCcc--------hHHHHHHHhhcCceecc
Q psy10669 258 RKNKLT--------GSKVELVLEEIAIACNK 280 (337)
Q Consensus 258 ~~~~~~--------~~~~~~~L~~~gI~v~~ 280 (337)
++...+ ..++.+.|.+.||.+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~ 339 (392)
T PLN03227 309 SDQEATRRTDETLILDQIAHHSLSEGVAVVS 339 (392)
T ss_pred CCHHHhhhhhhhhHHHHHHHHHHHCCCEEEe
Confidence 653211 24677778888999864
No 22
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.79 E-value=2.6e-17 Score=160.86 Aligned_cols=234 Identities=16% Similarity=0.213 Sum_probs=167.4
Q ss_pred ccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669 30 INGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S 104 (337)
.+.+..++|+||+ +|+|++++...+ .+|+.|++++|++.|.. ...++| +.+++++|.++ .+.++|
T Consensus 37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~-~~~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~ 106 (393)
T TIGR01822 37 GREVLNFCANNYLGLSSHPDLIQAAKDAL-DEHGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYAS 106 (393)
T ss_pred CceEEEeeCCCccccCCCHHHHHHHHHHH-HHhCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECc
Confidence 3456778899996 899999998764 46777999999999973 336777 58899999875 688889
Q ss_pred CchhHHHHHHhhCCc------------------------------------c--c-----c--cccEEEEcCccc---cc
Q psy10669 105 GSPANFAVCEKALPT------------------------------------N--N-----A--RFDFLSSGTTCY---SR 136 (337)
Q Consensus 105 gt~AN~~v~~aLl~~------------------------------------~--~-----a--~pklII~~~S~~---~~ 136 (337)
|+.||.+++.+++++ + + . ++++|+++ +.+ +.
T Consensus 107 ~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~-~v~~~tG~ 185 (393)
T TIGR01822 107 CFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATD-GVFSMDGV 185 (393)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEe-CCccCCCC
Confidence 999999999999765 0 0 1 24566665 344 44
Q ss_pred ccChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeecc------CCchhhh--hHHHHHhhccC
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVTK------TGEKILY--DYEEKINNAVF 191 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~~------~Gg~i~~--~l~~~i~~~~~ 191 (337)
..|+++|.++|+++|++|++|++|..|.++ .+++|.+ .||++.+ ++.+.+.+...
T Consensus 186 ~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~~~~~~l~~~~~ 265 (393)
T TIGR01822 186 IAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARKEVVELLRQRSR 265 (393)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCHHHHHHHHHhCc
Confidence 568888999999999999999999888763 1123332 4677665 56666665444
Q ss_pred CCCCC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHH
Q psy10669 192 PSLQG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 192 p~~~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
|...+ ++++..+++...++..+ .+.++.++++.++.+++.+.|.+.|+++.. .+.+++++.+.+. .+..++.+.
T Consensus 266 ~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~i~~~~~-~~~~~l~~~ 340 (393)
T TIGR01822 266 PYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAAGFDIKP--ADHPIIPVMLYDA-VLAQRFARR 340 (393)
T ss_pred cceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEeCCH-HHHHHHHHH
Confidence 54443 45556666666666544 245678899999999999999998988754 3455666654432 246677777
Q ss_pred HhhcCceec
Q psy10669 271 LEEIAIACN 279 (337)
Q Consensus 271 L~~~gI~v~ 279 (337)
|.+.||.+.
T Consensus 341 L~~~gI~v~ 349 (393)
T TIGR01822 341 LLEEGIYVT 349 (393)
T ss_pred HHHCCeeEe
Confidence 877799986
No 23
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.78 E-value=5.5e-17 Score=158.14 Aligned_cols=239 Identities=15% Similarity=0.108 Sum_probs=164.9
Q ss_pred cceeeeccCCCC----CHHHHHHHhhhhhhcc-------CCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcc
Q psy10669 31 NGIELIASENFT----SLAVLECLGSCLQNKY-------SEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGC 98 (337)
Q Consensus 31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y-------~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~ 98 (337)
..+..++||||+ +|.+.+++...+ .+| +.|..|+|.+.|+.. ++++| ++++++||+++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e----~~la~~~~~~~----- 73 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRY-RLYCRQFPHAQLGYGGSRAILGPSSLLDDLE----HKIAHFHGAPE----- 73 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHH-HHhccccCCCCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCe-----
Confidence 457799999999 889988887653 456 478899999999854 47887 58899999975
Q ss_pred eeecCCCchhHHHHHHhhCCc-------------------------------------c-cc------c-ccEEEEcCcc
Q psy10669 99 NVQPYSGSPANFAVCEKALPT-------------------------------------N-NA------R-FDFLSSGTTC 133 (337)
Q Consensus 99 ~v~~~Sgt~AN~~v~~aLl~~-------------------------------------~-~a------~-pklII~~~S~ 133 (337)
.+.|+||+.||+++...+.++ + +. + +++|++. +.
T Consensus 74 ~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~-~v 152 (370)
T PRK05937 74 AFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVC-SV 152 (370)
T ss_pred EEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEe-cC
Confidence 599999999999987776432 0 01 1 2344444 34
Q ss_pred c---ccccChHHHHHHhhhcCCeEEEeccccccccc--e--------------eeeec-----cCCchhhh--hHHHHHh
Q psy10669 134 Y---SRCLDYARFRQICDETDSIMFADMSHISGLIA--G--------------VKGVT-----KTGEKILY--DYEEKIN 187 (337)
Q Consensus 134 ~---~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g--------------~~~T~-----~~Gg~i~~--~l~~~i~ 187 (337)
+ +...|+++|.++|+++|++|+||+||+.|.++ + +..|. +.|+.+++ ++.+.+.
T Consensus 153 ~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~ 232 (370)
T PRK05937 153 YSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSSEVKQDLM 232 (370)
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcCHHHHHHHH
Confidence 4 45667778889999999999999999999876 1 12333 24655554 4444333
Q ss_pred hccCCCC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669 188 NAVFPSL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 188 ~~~~p~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~ 266 (337)
....|.. .++.+++.++++..++..+. ......++++.++.++|.+.|...+ ..+..++.+.. ..+.+
T Consensus 233 ~~~~~~~~s~~~~~~~~~a~~aal~~l~-~~~~~~~~~l~~l~~~l~~~l~~~~--------~~~~~~i~~~~--~~~~~ 301 (370)
T PRK05937 233 LNSPPLRYSTGLPPHLLISIQVAYDFLS-QEGELARKQLFRLKEYFAQKFSSAA--------PGCVQPIFLPG--ISEQE 301 (370)
T ss_pred HhCCCCeecCCCCHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHhcCCCC--------CCCEEEEEeCC--hhHHH
Confidence 2223444 34567778888888887764 3445677888888888888775432 12334555543 35678
Q ss_pred HHHHHhhcCceeccCc-----ccchhhhhH
Q psy10669 267 VELVLEEIAIACNKNT-----GISLAAEIQ 291 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~~-----girig~~~~ 291 (337)
+.+.|++.||.+.... .|||.....
T Consensus 302 ~~~~L~~~gi~v~~~~~~~~~~iRis~~~~ 331 (370)
T PRK05937 302 LYSKLVETGIRVGVVCFPTGPFLRVNLHAF 331 (370)
T ss_pred HHHHHHHCCeeEEeeCCCCCCEEEEEcCCC
Confidence 8889998999887322 578865443
No 24
>PLN02822 serine palmitoyltransferase
Probab=99.77 E-value=6.3e-17 Score=163.10 Aligned_cols=238 Identities=14% Similarity=0.138 Sum_probs=170.4
Q ss_pred cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
+.+..++|.||+ +|.+++++... ..+|+.|+.|+|.+.|+... .++| ++++++++.++ +|.+++|
T Consensus 109 ~~~id~~s~~~lgl~~~~~i~ea~~~a-l~~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G 178 (481)
T PLN02822 109 KDVVNFASANYLGLIGNEKIKESCTSA-LEKYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYG 178 (481)
T ss_pred ceEEEeECCCcCCCCCCHHHHHHHHHH-HHHhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCH
Confidence 445567889996 89999999876 56889999999987777554 5787 68899999875 6999999
Q ss_pred chhHHHHHHhhCCc-----------------------------------------c--cc-----cc-cEEEEcCccccc
Q psy10669 106 SPANFAVCEKALPT-----------------------------------------N--NA-----RF-DFLSSGTTCYSR 136 (337)
Q Consensus 106 t~AN~~v~~aLl~~-----------------------------------------~--~a-----~p-klII~~~S~~~~ 136 (337)
+.+|.+++.+++++ + .. ++ ++||+. +.|++
T Consensus 179 ~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve-~i~~~ 257 (481)
T PLN02822 179 LSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVE-AIYQN 257 (481)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEe-cCCCC
Confidence 88999999999765 0 01 13 466664 56654
Q ss_pred ---ccChHHHHHHhhhcCCeEEEeccccccccc--e----------------eeeec-c----CCchhhh--hHHHHHhh
Q psy10669 137 ---CLDYARFRQICDETDSIMFADMSHISGLIA--G----------------VKGVT-K----TGEKILY--DYEEKINN 188 (337)
Q Consensus 137 ---~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g----------------~~~T~-~----~Gg~i~~--~l~~~i~~ 188 (337)
..|+++|.++|++||++|++|++|+.|+++ | ++++. | .||++++ ++.+.+..
T Consensus 258 ~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~GG~i~g~~~ii~~~~~ 337 (481)
T PLN02822 258 SGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEGGFCTGSARVVDHQRL 337 (481)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCCeEEEcCHHHHHHHHh
Confidence 455667778999999999999999999886 2 12232 2 4888887 56666665
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC-Cc---c
Q psy10669 189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN-KL---T 263 (337)
Q Consensus 189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~-~~---~ 263 (337)
...+++++++.++..++.+.+..+..+ +.++.++++.+|.++|.+.|.+. |+++.. ...++++++.++.. +. +
T Consensus 338 ~~~~~~fsa~lPp~~~~Aa~~aL~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~spi~~l~l~~~~~~~~~~ 415 (481)
T PLN02822 338 SSSGYVFSASLPPYLASAAITAIDVLE-DNPSVLAKLKENIALLHKGLSDIPGLSIGS-NTLSPIVFLHLEKSTGSAKED 415 (481)
T ss_pred cCCceeeccccCHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCCCEEEEEeCCCcccccch
Confidence 445566766655554444433334433 35788999999999999999985 888753 36789999998643 10 1
Q ss_pred ---hHHHHHHH-hhcCceeccC
Q psy10669 264 ---GSKVELVL-EEIAIACNKN 281 (337)
Q Consensus 264 ---~~~~~~~L-~~~gI~v~~~ 281 (337)
..++.+.| ++.||.+.+.
T Consensus 416 ~~~~~~~~~~Ll~e~GV~v~~~ 437 (481)
T PLN02822 416 LSLLEHIADRMLKEDSVLVVVS 437 (481)
T ss_pred HHHHHHHHHHHHhcCCEEEEee
Confidence 24455555 4789999853
No 25
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=2.1e-16 Score=155.86 Aligned_cols=237 Identities=12% Similarity=0.115 Sum_probs=179.9
Q ss_pred CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh--
Q psy10669 40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA-- 116 (337)
Q Consensus 40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL-- 116 (337)
-.+|..|.+++...+. +| .+++++..+.-.....+.++.+|+.+++|+|++++ .+|.|++| |.+...+..++
T Consensus 32 ~~~p~~V~~a~~~~~~-~~-~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~---~eIvft~~tT~aln~va~~l~~ 106 (405)
T COG0520 32 SQKPQAVLDAVAEYYR-RY-NANVHRGAHTLAEEATDLYEAAREAVARFLNADSS---DEIVFTRGTTEALNLVARGLGR 106 (405)
T ss_pred ccCCHHHHHHHHHHHH-hh-cCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCChhHHHHHHHHHhhh
Confidence 3369999999986543 33 47788888888888888888999999999999952 36999999 56644444666
Q ss_pred -CCc---------------------------------------------cc-c--cccEEEEcCcc--cccccChHHHHH
Q psy10669 117 -LPT---------------------------------------------NN-A--RFDFLSSGTTC--YSRCLDYARFRQ 145 (337)
Q Consensus 117 -l~~---------------------------------------------~~-a--~pklII~~~S~--~~~~~d~~~l~e 145 (337)
+++ +. - ++|+|.+++-+ .+...|+++|.+
T Consensus 107 ~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~ 186 (405)
T COG0520 107 SLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAE 186 (405)
T ss_pred hhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHH
Confidence 332 10 0 26899998444 369999999999
Q ss_pred HhhhcCCeEEEeccccccccce---------eeeeccC------C-chhh-h-hHHHHHhhc------------------
Q psy10669 146 ICDETDSIMFADMSHISGLIAG---------VKGVTKT------G-EKIL-Y-DYEEKINNA------------------ 189 (337)
Q Consensus 146 ia~~~ga~l~vD~AH~~Gli~g---------~~~T~~~------G-g~i~-~-~l~~~i~~~------------------ 189 (337)
+|+++|++++||+||++|.+.. +.+++|| | |++. . ++.+.+.+.
T Consensus 187 la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~ 266 (405)
T COG0520 187 LAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTL 266 (405)
T ss_pred HHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccc
Confidence 9999999999999999999981 3344333 4 4433 2 444333221
Q ss_pred ---cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchH
Q psy10669 190 ---VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 190 ---~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~ 265 (337)
-.-+-.|||+..++.++..|++++++....+..++..++++++.+.|.+ .|+++++...+....++.+.-.+....
T Consensus 267 ~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~ 346 (405)
T COG0520 267 AELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPH 346 (405)
T ss_pred cCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHH
Confidence 0111259999999999999999998877789999999999999999998 579998733345677788888888999
Q ss_pred HHHHHHhhcCceeccC
Q psy10669 266 KVELVLEEIAIACNKN 281 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~~ 281 (337)
++...|.+.||.++.-
T Consensus 347 dv~~~L~~~gI~vr~g 362 (405)
T COG0520 347 DVATLLDEKGIAVRAG 362 (405)
T ss_pred HHHHHHHhCCeEEEec
Confidence 9999999999988864
No 26
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.69 E-value=4.1e-15 Score=142.44 Aligned_cols=234 Identities=16% Similarity=0.167 Sum_probs=165.4
Q ss_pred eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
...++|+.|+ +|+|++++...+. +|+.+..+.+.+.|. ....+++ +.+++++|+++ .+.++||+.
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~iv~~sg~~ 72 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALD-KYGVGAGGSRLISGTSDLHEELE----EELAEFHGKEA-----ALVFSSGYA 72 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHH-HhCCCCCCcCeecCCchHHHHHH----HHHHHHhCCCC-----EEEeccHHH
Confidence 3457899999 8999999998765 565555555666564 3335665 57889999875 588899999
Q ss_pred hHHHHHHhhCCc-----------------------------------------cc---ccccEEEEcC--cccccccChH
Q psy10669 108 ANFAVCEKALPT-----------------------------------------NN---ARFDFLSSGT--TCYSRCLDYA 141 (337)
Q Consensus 108 AN~~v~~aLl~~-----------------------------------------~~---a~pklII~~~--S~~~~~~d~~ 141 (337)
+|.+++.+++++ +. .++++++++. +..++..|++
T Consensus 73 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~ 152 (349)
T cd06454 73 ANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLP 152 (349)
T ss_pred HHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHH
Confidence 999888888754 10 1256676653 2235778999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CCchhhh--hHHHHHhhccCCCC-CC
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TGEKILY--DYEEKINNAVFPSL-QG 196 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~g 196 (337)
+|.++|+++|+++++|++|..|.++ .+.+++ | .||+++. ++.+.+.....+.. .+
T Consensus 153 ~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~~~ 232 (349)
T cd06454 153 ELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFST 232 (349)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhccC
Confidence 9999999999999999999887653 112333 2 4777765 45555555444443 34
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
+.+++.++++..++..+.+ ++..++++.++.++|.+.|.+.|+.+.. ...+.+++.+...+.+..++.+.|.+.||
T Consensus 233 ~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~~~gI 308 (349)
T cd06454 233 SLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGG--SPSHIIPPLIGDDPAKAVAFSDALLERGI 308 (349)
T ss_pred CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCcEEEEeCCChHHHHHHHHHHHhCCc
Confidence 6777788888888877643 6778999999999999999999988765 22344333333323466788888888899
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+..
T Consensus 309 ~~~~ 312 (349)
T cd06454 309 YVQA 312 (349)
T ss_pred eEEE
Confidence 9874
No 27
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.69 E-value=2.3e-15 Score=145.27 Aligned_cols=235 Identities=17% Similarity=0.137 Sum_probs=169.3
Q ss_pred cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh
Q psy10669 38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA 116 (337)
Q Consensus 38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL 116 (337)
..-.++|+|+++|...+... .|+|.| .+.-...+.++.+.||+.++++.|+++ ..|.|+|| |.+|..++.+.
T Consensus 9 ATTp~~~~v~~~m~~~~~~~--fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~----~eIiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 9 ATTPVDPEVLEAMLPYLTEV--FGNPSS-LHSFGREARKAVEEAREQIAKLLGADP----EEIIFTSGATESNNLAIKGA 81 (386)
T ss_pred ccCCCCHHHHHHHHHHHHhh--cCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCC----CeEEEecCCcHHHHHHHHhh
Confidence 34456999999999887765 489998 555455666666789999999999998 37999998 88876666773
Q ss_pred C--C-----c-------------------------------------------ccc-cc--cEEEEcCcc--cccccChH
Q psy10669 117 L--P-----T-------------------------------------------NNA-RF--DFLSSGTTC--YSRCLDYA 141 (337)
Q Consensus 117 l--~-----~-------------------------------------------~~a-~p--klII~~~S~--~~~~~d~~ 141 (337)
+ . . +.+ +| .||.+.+.+ .+..+|++
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ 161 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIA 161 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHH
Confidence 1 1 0 111 24 455454544 48999999
Q ss_pred HHHHHhhhcCCeEEEeccccccccce---------eeee-c----cCC-chh-hh---hHHHHHhh--ccCCCCCCCCcH
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIAG---------VKGV-T----KTG-EKI-LY---DYEEKINN--AVFPSLQGGPHN 200 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~g---------~~~T-~----~~G-g~i-~~---~l~~~i~~--~~~p~~~g~~~~ 200 (337)
+|.+||+++|+++.+|+.|+.|-++. ++++ | ||| |++ +. .+...+.- .-+....||.+.
T Consensus 162 ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv 241 (386)
T COG1104 162 EIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPLIHGGGQERGLRSGTENV 241 (386)
T ss_pred HHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECCCCccCceeccCcCCCCCCCCCccH
Confidence 99999999999999999999999991 2333 2 455 444 32 12222221 112223689999
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC--CCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG--GTDVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
|+|+|++.|+.... .+++...+++.+.-++|.+.|.+ .++.+.+. ..-+|++.+.+ .++.+..+-..|+.+||
T Consensus 242 ~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f--~gv~gE~ll~~L~~~gI 318 (386)
T COG1104 242 PGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF--PGVEGESLLLALDLAGI 318 (386)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEe--CCCcHHHHHHhccccCe
Confidence 99999999999986 57788899999999999999997 45555542 12355555544 46789999999999999
Q ss_pred eeccCc
Q psy10669 277 ACNKNT 282 (337)
Q Consensus 277 ~v~~~~ 282 (337)
.+..-+
T Consensus 319 ~vStGS 324 (386)
T COG1104 319 AVSTGS 324 (386)
T ss_pred EEeccc
Confidence 987644
No 28
>KOG1357|consensus
Probab=99.69 E-value=4.7e-16 Score=149.95 Aligned_cols=230 Identities=15% Similarity=0.126 Sum_probs=167.8
Q ss_pred eeeeccCCCC---------CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669 33 IELIASENFT---------SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQP 102 (337)
Q Consensus 33 i~l~asen~~---------~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~ 102 (337)
...+.|=||+ .+.+.+++ .+|+....++|-..|+... .++|. ..|+|+|.++ ++.|
T Consensus 138 ~lNlgSYNYLGFa~~~g~ca~~~~~~~-----~kygl~~css~~e~G~~~~hkelE~----l~A~f~g~e~-----a~vF 203 (519)
T KOG1357|consen 138 CLNLGSYNYLGFAQSVGPCAEASLKSF-----DKYGLSRCSSRHEAGTTEEHKELEE----LVARFLGVED-----AIVF 203 (519)
T ss_pred eeeecccccccccccCCcCChHHHHHH-----HHhcccccccchhcccHHHHHHHHH----HHHHhcCCcc-----eEEE
Confidence 3456889998 45555544 4788888899999999666 58994 5689999997 7999
Q ss_pred CCCchhHHHHHHhhCCc-------------------------------------------------ccccc--cEEEEcC
Q psy10669 103 YSGSPANFAVCEKALPT-------------------------------------------------NNARF--DFLSSGT 131 (337)
Q Consensus 103 ~Sgt~AN~~v~~aLl~~-------------------------------------------------~~a~p--klII~~~ 131 (337)
.-|+.+|-..+.+|+.+ +..+| |++|+.+
T Consensus 204 ~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iive 283 (519)
T KOG1357|consen 204 SMGFATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVE 283 (519)
T ss_pred eccccccccCcceeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeec
Confidence 99999999999999765 11123 7888888
Q ss_pred cccccccChH---HHHHHhhhcCCeEEEeccccccccc----e--------------eeeecc-----CCchhhh--hHH
Q psy10669 132 TCYSRCLDYA---RFRQICDETDSIMFADMSHISGLIA----G--------------VKGVTK-----TGEKILY--DYE 183 (337)
Q Consensus 132 S~~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~----g--------------~~~T~~-----~Gg~i~~--~l~ 183 (337)
..|+|.+-+- ++.++++++.++|+.|+||+.|-++ | +++|++ .||+|.+ ++.
T Consensus 284 giysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GGyiagsk~li 363 (519)
T KOG1357|consen 284 GIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGGYIAGSKELI 363 (519)
T ss_pred cceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccceecCcHHHH
Confidence 8998776555 5557889999999999999999997 1 244543 3788887 577
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR 258 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~ 258 (337)
+.+....-...+++..+|.+|.-.....+++ +..+.+..+|+.+|+++|+..|.+.||-++ |..|++++|+.+-
T Consensus 364 d~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivy-G~~dSpVvplll~ 442 (519)
T KOG1357|consen 364 DYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVY-GNNDSPVVPLLLY 442 (519)
T ss_pred hhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEe-cCCCCCcceeeec
Confidence 7766442223366667777776665555544 234578899999999999999999999877 4688999998876
Q ss_pred CCCcchHHHHHHHhhcCcee
Q psy10669 259 KNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 259 ~~~~~~~~~~~~L~~~gI~v 278 (337)
.....+. ..+.|-+.+|-+
T Consensus 443 ~~~k~~~-f~r~~l~~nigv 461 (519)
T KOG1357|consen 443 GPAKIVA-FSREMLERNIGV 461 (519)
T ss_pred CcccccH-HHHHHHhcCceE
Confidence 6553444 444444434443
No 29
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.68 E-value=5.3e-15 Score=144.20 Aligned_cols=242 Identities=13% Similarity=0.110 Sum_probs=156.4
Q ss_pred cceeeec--cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccc------hHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669 31 NGIELIA--SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQ------FIDEIEIVAQQRSLKAFNLDPEQWGCNVQP 102 (337)
Q Consensus 31 ~~i~l~a--sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~------~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~ 102 (337)
.+|||-| +-..+...+.+++ .+|+.|+.++|+.+|+. .+++++ +.+++++|++. .+.+
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----e~lA~~~g~~~-----~~i~ 72 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKAL-----VEFGDGYSVCDFCGGRLDQITKPPIHDFL----EDLAEFLGMDE-----ARVT 72 (370)
T ss_pred cccccChhhhCCCCcHHHHHHH-----HHHhhccccccccccccccccchHHHHHH----HHHHHHhCCCc-----eEEE
Confidence 3455543 2333444454444 46788999999988875 344444 56899999986 3456
Q ss_pred CCCchhHHHHHHhhCCc---------------------------------------------ccc--------cccEEEE
Q psy10669 103 YSGSPANFAVCEKALPT---------------------------------------------NNA--------RFDFLSS 129 (337)
Q Consensus 103 ~Sgt~AN~~v~~aLl~~---------------------------------------------~~a--------~pklII~ 129 (337)
++|+.+|.+++.+++++ .+. ++++|++
T Consensus 73 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~ 152 (370)
T TIGR02539 73 HGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALL 152 (370)
T ss_pred CChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEE
Confidence 77799999999999754 000 1356776
Q ss_pred c--CcccccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC-----C--chhhh--hHHHHHhhc
Q psy10669 130 G--TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT-----G--EKILY--DYEEKINNA 189 (337)
Q Consensus 130 ~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~-----G--g~i~~--~l~~~i~~~ 189 (337)
. .+.++...|+++|.++|+++|+++++|+||+.|.++ .+++|.+| | |+++. ++.+.+.+.
T Consensus 153 ~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~ 232 (370)
T TIGR02539 153 THVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRK 232 (370)
T ss_pred ECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhccc
Confidence 4 233567788888999999999999999999999765 13455432 4 66654 566666554
Q ss_pred cCCCCC-------CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCC-
Q psy10669 190 VFPSLQ-------GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKN- 260 (337)
Q Consensus 190 ~~p~~~-------g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~- 260 (337)
..|... +++.....+++..++.++. ++-+...+..+++++|++.|.+.|+++++ ..++++++.+++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~l~~~~~~~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~ 310 (370)
T TIGR02539 233 SRYSPVKEVELLGCTSRGAPIVTMMASFPHVV--ERVKRWDEEVKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFH 310 (370)
T ss_pred ccCCccceeeeecccccccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCchh
Confidence 444322 3333344555555554432 22233456677789999999999999863 347788888876421
Q ss_pred ------CcchHHHHHHHhhcCce-eccCc--ccchhh
Q psy10669 261 ------KLTGSKVELVLEEIAIA-CNKNT--GISLAA 288 (337)
Q Consensus 261 ------~~~~~~~~~~L~~~gI~-v~~~~--girig~ 288 (337)
...+..+.+.|.+.||. +.... -|||+.
T Consensus 311 ~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~ 347 (370)
T TIGR02539 311 EIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSV 347 (370)
T ss_pred HHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEe
Confidence 11345688888888997 44321 466653
No 30
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.66 E-value=2.9e-14 Score=142.95 Aligned_cols=250 Identities=14% Similarity=0.148 Sum_probs=171.5
Q ss_pred ccceeeeccC---CCCCHH----HHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669 30 INGIELIASE---NFTSLA----VLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP 102 (337)
Q Consensus 30 ~~~i~l~ase---n~~~p~----V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~ 102 (337)
.+.|+|-..+ ++.+|. +.+++...+.. |...|+++..+.+++ +.++++|+.++ .+..
T Consensus 36 ~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~-------g~~~Y~~~~g~~~Lr----eaia~~~~~~~-----vv~t 99 (460)
T PRK13238 36 YNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMR-------GDEAYAGSRSYYRLE----DAVKDIFGYPY-----TIPT 99 (460)
T ss_pred CCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHh-------CCcccCCCCCHHHHH----HHHHHHhCCCc-----EEEC
Confidence 3556665555 455544 56666555432 334577777788887 57889999875 4666
Q ss_pred CCCchhHHHHHHhhCCc------------------------------c-------------c---------c-----ccc
Q psy10669 103 YSGSPANFAVCEKALPT------------------------------N-------------N---------A-----RFD 125 (337)
Q Consensus 103 ~Sgt~AN~~v~~aLl~~------------------------------~-------------~---------a-----~pk 125 (337)
+||+.|+..++.+++++ + + . +++
T Consensus 100 ~ggt~A~~~~~~all~pGDVii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk 179 (460)
T PRK13238 100 HQGRAAEQILFPVLIKKGDVVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVP 179 (460)
T ss_pred CCHHHHHHHHHHHhCCCCCEEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCcee
Confidence 77799999889998764 0 0 0 145
Q ss_pred EEEEcCcccc---cccC---hHHHHHHhhhcCCeEEEecccccc-----------ccc---------------eeeeecc
Q psy10669 126 FLSSGTTCYS---RCLD---YARFRQICDETDSIMFADMSHISG-----------LIA---------------GVKGVTK 173 (337)
Q Consensus 126 lII~~~S~~~---~~~d---~~~l~eia~~~ga~l~vD~AH~~G-----------li~---------------g~~~T~~ 173 (337)
+|+++..+++ ...+ +++|+++|+++|++|+.|+||..+ .-. .+++|++
T Consensus 180 ~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~ 259 (460)
T PRK13238 180 FIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAK 259 (460)
T ss_pred EEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecc
Confidence 7777644433 3334 567889999999999999999763 111 1234443
Q ss_pred ------CCchhhh---hHHHHHhhccC--CC--CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669 174 ------TGEKILY---DYEEKINNAVF--PS--LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~--p~--~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G 240 (337)
.||+++. ++.++++...+ ++ .+|+++.+.++|+++++.+..+. +|.+..+++.++|.+.|.+.|
T Consensus 260 K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~~~~~~~l~~~L~~~G 336 (460)
T PRK13238 260 KDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYRIGQVEYLGEGLEEAG 336 (460)
T ss_pred cCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhCh---HHHHHHHHHHHHHHHHHHHCC
Confidence 3778875 47777776643 23 36777777899999999987653 556666778999999999999
Q ss_pred CEEecCCCCCeEEEEEecCC-------Cc-chHHHHHHHhhcCceeccCc-------------------ccchhhhhHhh
Q psy10669 241 YHVVTGGTDVHLILIDLRKN-------KL-TGSKVELVLEEIAIACNKNT-------------------GISLAAEIQAI 293 (337)
Q Consensus 241 ~~v~~~~t~~h~v~V~~~~~-------~~-~~~~~~~~L~~~gI~v~~~~-------------------girig~~~~t~ 293 (337)
++++. ..-.|.+.+|++.. ++ +...+..+|++.||.+.+.. .+|++.+ +
T Consensus 337 ~~~~~-p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~---r 412 (460)
T PRK13238 337 VPIQT-PAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIP---R 412 (460)
T ss_pred CCeEc-cCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecc---c
Confidence 99985 35569999999753 22 34455566667999986533 7888887 7
Q ss_pred hCCCHHHHH
Q psy10669 294 SGPKLVDFQ 302 (337)
Q Consensus 294 ~G~~~~~~~ 302 (337)
|+++...+.
T Consensus 413 r~~~~~~~~ 421 (460)
T PRK13238 413 RVYTQSHMD 421 (460)
T ss_pred ccCCHHHHH
Confidence 787755554
No 31
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.65 E-value=5.9e-14 Score=137.87 Aligned_cols=238 Identities=16% Similarity=0.139 Sum_probs=164.9
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC 113 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~ 113 (337)
.-++...+|+.|.+++...+.+.+ ++++++.+.......+....+|+++++++|++++ .+|.+++| +.++..++
T Consensus 24 d~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~~i~~~~~~t~~i~~~~ 98 (401)
T PRK10874 24 DSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA---KNIVWTRGTTESINLVA 98 (401)
T ss_pred eCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC---CEEEEECCHHHHHHHHH
Confidence 445666779999999987665433 6665544433344444455677899999999433 36777777 67766666
Q ss_pred HhhC----Cc---------------------------------------------ccc---cccEEEEcCccc--ccccC
Q psy10669 114 EKAL----PT---------------------------------------------NNA---RFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 114 ~aLl----~~---------------------------------------------~~a---~pklII~~~S~~--~~~~d 139 (337)
.++. ++ +.+ ++++|++...++ +...|
T Consensus 99 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~ 178 (401)
T PRK10874 99 QSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPD 178 (401)
T ss_pred HHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCC
Confidence 7762 22 001 268887764333 58899
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc---------eeeee-c----cCC-chhhh--hHHHHHhhcc------------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGV-T----KTG-EKILY--DYEEKINNAV------------ 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~----~~G-g~i~~--~l~~~i~~~~------------ 190 (337)
+++|.++|+++|++++||++|..|.+. .+.++ + +.| |++.. ++.+.+.+..
T Consensus 179 ~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (401)
T PRK10874 179 LARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFD 258 (401)
T ss_pred HHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEchHHHhcCCCeecCCcceEeeccC
Confidence 999999999999999999999988776 12233 2 234 55433 4444433211
Q ss_pred ------CC--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC
Q psy10669 191 ------FP--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 191 ------~p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
.| .-.||++.+.++++..++..+.+..+...++++.+++++|.+.|.+. |+.+... ..+.++.+.+. +
T Consensus 259 ~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~-~~~~i~~~~~~--~ 335 (401)
T PRK10874 259 GFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRC-QDSSLLAFDFA--G 335 (401)
T ss_pred ccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC-CCCcEEEEEEC--C
Confidence 11 12589999999999999988766666677888899999999999885 9888742 34567666654 4
Q ss_pred cchHHHHHHHhhcCceecc
Q psy10669 262 LTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 262 ~~~~~~~~~L~~~gI~v~~ 280 (337)
+++.++.+.|.+.||.+..
T Consensus 336 ~~~~~~~~~L~~~gI~v~~ 354 (401)
T PRK10874 336 VHHSDLVTLLAEYGIALRA 354 (401)
T ss_pred cCHHHHHHHHHHCCcEEec
Confidence 5678888999989998875
No 32
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.64 E-value=5.7e-14 Score=136.60 Aligned_cols=238 Identities=18% Similarity=0.150 Sum_probs=166.1
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE 114 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~ 114 (337)
.++-..+|+.|++++...+.+.+ ++|.+..+.......++-..+++++++++|++++ .+|.|+++ |.++..++.
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~---~~v~~~~~~t~a~~~~~~ 79 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFY--ANPHSGVSHRSREFAEILEEAREALAKLLGAPPD---EEVVFTSNGTEALNAVAS 79 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSG--SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT---EEEEEESSHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhh--hcCcccccchhhhhhHHHHHHHHHHHHhcCCccc---cccccccccchhhhhhhh
Confidence 35566789999999987766544 5554444443444455555788999999999973 26777666 668877788
Q ss_pred hh---CCc-------------------------------------------cc-----ccccEEEEcCcc--cccccChH
Q psy10669 115 KA---LPT-------------------------------------------NN-----ARFDFLSSGTTC--YSRCLDYA 141 (337)
Q Consensus 115 aL---l~~-------------------------------------------~~-----a~pklII~~~S~--~~~~~d~~ 141 (337)
++ +++ .. .++++|++++-. .+...|++
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~ 159 (371)
T PF00266_consen 80 SLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIE 159 (371)
T ss_dssp HHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHH
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeec
Confidence 88 443 01 127888888544 47999999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhh-h-hHHHHHhhccCC------------
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKIL-Y-DYEEKINNAVFP------------ 192 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~-~-~l~~~i~~~~~p------------ 192 (337)
+|.++|+++|++++||++|++|.+. + +++. +| .| |++. . ++.+++++...+
T Consensus 160 ~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~ 239 (371)
T PF00266_consen 160 EIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEY 239 (371)
T ss_dssp HHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHH
T ss_pred eehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhhhhccccccccccccccccchhc
Confidence 9999999999999999999999998 1 2333 32 34 4432 2 344444332221
Q ss_pred --------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecC---CCCCeEEEEEecCC
Q psy10669 193 --------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTG---GTDVHLILIDLRKN 260 (337)
Q Consensus 193 --------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~---~t~~h~v~V~~~~~ 260 (337)
+-.||++.+.++++..+++.+.+...+...++..++++++.+.|.+.+ +.+.+. ...+.++.+.+ .
T Consensus 240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~--~ 317 (371)
T PF00266_consen 240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNL--P 317 (371)
T ss_dssp CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEE--T
T ss_pred ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEee--c
Confidence 125799999999999999998666667889999999999999999954 455431 23455666666 5
Q ss_pred CcchHHHHHHHhhcCceecc
Q psy10669 261 KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~ 280 (337)
+.++.++.+.|++.||.+..
T Consensus 318 ~~~~~~~~~~L~~~~I~~~~ 337 (371)
T PF00266_consen 318 GSDADDVVKYLEERGIAVST 337 (371)
T ss_dssp TSSHHHHHHHHHHHTEEEEE
T ss_pred CCCHHHHHHHHhhcCEEEec
Confidence 66789999999988999876
No 33
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.64 E-value=9.5e-14 Score=136.29 Aligned_cols=238 Identities=16% Similarity=0.126 Sum_probs=164.9
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC 113 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~ 113 (337)
..++-..+|+.|++++...+... .+++++..+.+.....+....+|+.+++++|++++ -+|.+++| |.++..++
T Consensus 21 d~a~~~~~p~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 21 DSAATALKPQAVIDATQQFYRLS--SGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA---ENIVWTRGTTESINLVA 95 (398)
T ss_pred eCccccCCCHHHHHHHHHHHHhc--CCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCChHHHHHHHH
Confidence 34555677999999998765433 25665554544444545555678899999999632 25777777 67766666
Q ss_pred Hhh----CCc---------------------------------------------ccc---cccEEEEcCcc--cccccC
Q psy10669 114 EKA----LPT---------------------------------------------NNA---RFDFLSSGTTC--YSRCLD 139 (337)
Q Consensus 114 ~aL----l~~---------------------------------------------~~a---~pklII~~~S~--~~~~~d 139 (337)
.++ +++ +.+ ++++|++...+ .+...|
T Consensus 96 ~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~ 175 (398)
T TIGR03392 96 QSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPD 175 (398)
T ss_pred HHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCC
Confidence 776 232 001 26888776333 358899
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhhh--hHHHHHhhcc------------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKILY--DYEEKINNAV------------ 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~~--~l~~~i~~~~------------ 190 (337)
+++|.++|+++|+++++|++|..|.+. + ++++ +| .| |++.. ++.+.+.+..
T Consensus 176 ~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (398)
T TIGR03392 176 LARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFD 255 (398)
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcHHHHhhCCCeecCCceEeecccc
Confidence 999999999999999999999988765 1 2223 22 34 55543 4444443211
Q ss_pred ------CC--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC
Q psy10669 191 ------FP--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 191 ------~p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
.| .-.||++.+.++++..++..+.+..+++.+++..++++++.+.|.+. |+++... ..++++.+.+. +
T Consensus 256 ~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~-~~~~i~~~~~~--~ 332 (398)
T TIGR03392 256 GFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRC-PGSSLLAFDFA--G 332 (398)
T ss_pred ccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCCcEEEEEeC--C
Confidence 11 12589999999999999998866566778889999999999999884 8888742 34566665543 5
Q ss_pred cchHHHHHHHhhcCceecc
Q psy10669 262 LTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 262 ~~~~~~~~~L~~~gI~v~~ 280 (337)
.++.++.+.|.+.||.+..
T Consensus 333 ~~~~~l~~~L~~~gI~v~~ 351 (398)
T TIGR03392 333 VHHSDLAALLAESGIALRA 351 (398)
T ss_pred cCHHHHHHHHHhCCEEEec
Confidence 5678889999999999874
No 34
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.62 E-value=9.4e-14 Score=136.24 Aligned_cols=233 Identities=12% Similarity=0.077 Sum_probs=147.3
Q ss_pred ceeeecc--CCCCCHHHHHHHhhhhhhccCCCCCCC---cCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 32 GIELIAS--ENFTSLAVLECLGSCLQNKYSEGLPGK---RYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 32 ~i~l~as--en~~~p~V~~a~~~~l~~~y~~g~~g~---r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
.|||=+- --.+++.+++|+.... ..| ++|.+ +.-.++. .++++ ++.++++||+++ .+..+|+
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~l----~~~lA~~~g~~~-----~~~~~g~ 87 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYG-DGY--SVCDYCPGRLDQIKKPPIADF----HEDLAEFLGMDE-----ARVTHGA 87 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHH-hcc--CCCcccccccccccChHHHHH----HHHHHHHhCCCc-----EEEeCCH
Confidence 4444332 2455899999997653 222 33322 2222332 23444 478899999975 3444555
Q ss_pred chhHHHHHHhhCCc-----------------------------c----------------cc--------cccEEEEcCc
Q psy10669 106 SPANFAVCEKALPT-----------------------------N----------------NA--------RFDFLSSGTT 132 (337)
Q Consensus 106 t~AN~~v~~aLl~~-----------------------------~----------------~a--------~pklII~~~S 132 (337)
+.+|.+++.+++++ . +. ++++|+++..
T Consensus 88 t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~ 167 (387)
T PRK09331 88 REGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHV 167 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECC
Confidence 88999999998654 0 00 2577777632
Q ss_pred --ccccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC-------Cchhhh--hHHHHHhhccCC
Q psy10669 133 --CYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT-------GEKILY--DYEEKINNAVFP 192 (337)
Q Consensus 133 --~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~-------Gg~i~~--~l~~~i~~~~~p 192 (337)
..+...|+++|.++|+++|++++||+||+.|.++ .++++.+| +|++.. ++.+.+.....+
T Consensus 168 ~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~ 247 (387)
T PRK09331 168 DGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRK 247 (387)
T ss_pred CCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCC
Confidence 2567888999999999999999999999999765 13333322 366654 455544332211
Q ss_pred C-------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEec-----
Q psy10669 193 S-------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLR----- 258 (337)
Q Consensus 193 ~-------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~----- 258 (337)
+ ..++..+..++++..++.++.+ . .+..++.+++++++++.|.+. |++++.. .+.++++.++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~ 325 (387)
T PRK09331 248 FGVKEVELLGCTLRGAPLVTLMASFPHVVE-R-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEI 325 (387)
T ss_pred CcccceeeeceecCchHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHH
Confidence 1 1234444455555566666542 2 345566789999999999998 9999852 245666666643
Q ss_pred --CCCcchHHHHHHHhhcCcee
Q psy10669 259 --KNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 259 --~~~~~~~~~~~~L~~~gI~v 278 (337)
..+.++.++.+.|.++||.+
T Consensus 326 ~~~~~~~~~~~~~~L~~~gI~~ 347 (387)
T PRK09331 326 AKKHKRRGFFLYEELKKRGIHG 347 (387)
T ss_pred hhhccccchhHHHHHHHcCceE
Confidence 12235577899999899984
No 35
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.62 E-value=2.7e-14 Score=137.86 Aligned_cols=236 Identities=14% Similarity=0.141 Sum_probs=161.4
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
++...+++.|++++...+.+.+ ++|+++.+.-.....++...+++++++++|++.. +|.+++| +.+|..++.+
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~~ 78 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVERARKQVAEALGADTE----EVIFTSGATESNNLAILG 78 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 4556789999999987665433 6777765542323334444577899999999762 6888887 6787766676
Q ss_pred hCC-------c-------------------------------------------ccc--cccEEEEcCcc--cccccChH
Q psy10669 116 ALP-------T-------------------------------------------NNA--RFDFLSSGTTC--YSRCLDYA 141 (337)
Q Consensus 116 Ll~-------~-------------------------------------------~~a--~pklII~~~S~--~~~~~d~~ 141 (337)
+.. + +.. ++++|++.... .++..|++
T Consensus 79 l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~ 158 (353)
T TIGR03235 79 LARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIR 158 (353)
T ss_pred HHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHH
Confidence 631 1 101 26778776322 46888999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc---------eeeee-cc----CC-chhh-h-hHHH--HHhhccCC------CCCC
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK----TG-EKIL-Y-DYEE--KINNAVFP------SLQG 196 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~----~G-g~i~-~-~l~~--~i~~~~~p------~~~g 196 (337)
+|.++|+++|++++||++|+.|.+. .+.++ +| .| |++. . +... .+.+..+. ...|
T Consensus 159 ~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (353)
T TIGR03235 159 EIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPG 238 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCCCCcCccccC
Confidence 9999999999999999999999887 12233 32 33 4443 2 2211 22322221 2257
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
+++++.++++..++..+. ...++.+++..+++++|.+.|.+.|+++++.....+-.++.+...+.++.++...|++ ||
T Consensus 239 t~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i 316 (353)
T TIGR03235 239 TLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DA 316 (353)
T ss_pred CCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-Ce
Confidence 999999999999998875 4557888999999999999999999999863222222234444456788899999976 77
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+..
T Consensus 317 ~v~~ 320 (353)
T TIGR03235 317 AVST 320 (353)
T ss_pred EEEc
Confidence 7764
No 36
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.62 E-value=1.5e-13 Score=135.32 Aligned_cols=239 Identities=10% Similarity=0.010 Sum_probs=161.4
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC 113 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~ 113 (337)
-.|+-..+++.|++++...+...| +++.++.+.......+....+|+.+++++|++++ -+|.+++| |.++..++
T Consensus 28 d~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~---~~v~~t~g~t~~l~~~~ 102 (406)
T PRK09295 28 DSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKQAALFINARSA---EELVFVRGTTEGINLVA 102 (406)
T ss_pred eCcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC---CeEEEeCCHHHHHHHHH
Confidence 456666789999999987654332 4554434433333333334577899999998432 25888888 57766666
Q ss_pred Hhh----CCc-------------------------------------------cc--c---cccEEEEcCcc--cccccC
Q psy10669 114 EKA----LPT-------------------------------------------NN--A---RFDFLSSGTTC--YSRCLD 139 (337)
Q Consensus 114 ~aL----l~~-------------------------------------------~~--a---~pklII~~~S~--~~~~~d 139 (337)
.++ +++ .+ + ++++|++.+-+ .+...|
T Consensus 103 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~ 182 (406)
T PRK09295 103 NSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENP 182 (406)
T ss_pred HHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCC
Confidence 653 332 01 1 26888877333 468999
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc---------eeeee-c----cCC-chhhh--hHHHHHhhcc------------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGV-T----KTG-EKILY--DYEEKINNAV------------ 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~----~~G-g~i~~--~l~~~i~~~~------------ 190 (337)
+++|.++|+++|++++||++|..|.+. .++++ + |.| |++.. ++.+.+.+..
T Consensus 183 ~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~ 262 (406)
T PRK09295 183 LAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLT 262 (406)
T ss_pred HHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhhCCCcccCCceeeeeecC
Confidence 999999999999999999999999876 12233 2 234 44432 3433332110
Q ss_pred ---------CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC
Q psy10669 191 ---------FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN 260 (337)
Q Consensus 191 ---------~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~ 260 (337)
+-.-.||++.+.++++..+++++.+...+..+++..++++++.+.|.+. |+++++.....+++.+.+ .
T Consensus 263 ~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~--~ 340 (406)
T PRK09295 263 EGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNL--G 340 (406)
T ss_pred CccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEE--C
Confidence 0123689999999999999999875566778888999999999999875 788886322244555444 3
Q ss_pred CcchHHHHHHHhhcCceecc
Q psy10669 261 KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~ 280 (337)
+.++.++.+.|++.||.+..
T Consensus 341 ~~~~~~~~~~L~~~gI~v~~ 360 (406)
T PRK09295 341 KHHAYDVGSFLDNYGIAVRT 360 (406)
T ss_pred CcCHHHHHHHHHhCCeEEec
Confidence 45778888999999998864
No 37
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.62 E-value=2.2e-13 Score=133.74 Aligned_cols=240 Identities=10% Similarity=0.048 Sum_probs=161.6
Q ss_pred eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHH
Q psy10669 34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAV 112 (337)
Q Consensus 34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v 112 (337)
-..++-..+|+.|.+++...+...| +++.++.+.-.....+....+++.+++++|++++ .+|.+++| +.++..+
T Consensus 22 ld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~---~~v~~~~g~t~~l~~~ 96 (403)
T TIGR01979 22 LDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYEAVREKVAKFINAASD---EEIVFTRGTTESINLV 96 (403)
T ss_pred EeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC---CeEEEeCCHHHHHHHH
Confidence 3556667789999999976655543 4444333221222223334567899999999843 25778777 5665555
Q ss_pred HHhh----CCc-------------------------------------------cc----c-cccEEEEcCcc--ccccc
Q psy10669 113 CEKA----LPT-------------------------------------------NN----A-RFDFLSSGTTC--YSRCL 138 (337)
Q Consensus 113 ~~aL----l~~-------------------------------------------~~----a-~pklII~~~S~--~~~~~ 138 (337)
+.++ +++ .+ . +|++|++.... .+...
T Consensus 97 ~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~ 176 (403)
T TIGR01979 97 AYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVN 176 (403)
T ss_pred HHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccC
Confidence 5553 222 00 0 27888877433 36889
Q ss_pred ChHHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc----CC-chhhh--hHHHHHhhccC----------
Q psy10669 139 DYARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK----TG-EKILY--DYEEKINNAVF---------- 191 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~----~G-g~i~~--~l~~~i~~~~~---------- 191 (337)
|+++|.++|+++|+++++|++|+.|.+. .++++ +| .| |++.. ++.+.+.+...
T Consensus 177 ~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~ 256 (403)
T TIGR01979 177 PVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMPPFLGGGEMIAEVSF 256 (403)
T ss_pred CHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCCceEEEEchHHHhcCCCeecCCCceeeccc
Confidence 9999999999999999999999998765 12233 22 34 55543 44444332110
Q ss_pred ----------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC---CCeEEEEEe
Q psy10669 192 ----------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT---DVHLILIDL 257 (337)
Q Consensus 192 ----------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t---~~h~v~V~~ 257 (337)
..-.|+++...++++..+++.+.+...+..++++.+++++|.+.|.+. |+++++... .++++.+.+
T Consensus 257 ~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~ 336 (403)
T TIGR01979 257 EETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNV 336 (403)
T ss_pred CccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEe
Confidence 012478999999999999988765456788899999999999999875 899886321 256776766
Q ss_pred cCCCcchHHHHHHHhhcCceecc
Q psy10669 258 RKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 258 ~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
. +.++.++.+.|++.||.++.
T Consensus 337 ~--~~~~~~~~~~L~~~gI~v~~ 357 (403)
T TIGR01979 337 E--GVHPHDVGTILDEEGIAVRS 357 (403)
T ss_pred C--CcCHHHHHHHHhhCCEEEcc
Confidence 4 34677888999999999874
No 38
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.62 E-value=1.4e-13 Score=132.20 Aligned_cols=234 Identities=13% Similarity=0.144 Sum_probs=161.4
Q ss_pred ccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669 30 INGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S 104 (337)
.+.+.-+.++|++ +|.+++++...+ .+|+.++++.+...|. ...++++ +.++++++.+. ++.+++
T Consensus 15 g~~~id~~~~~~~g~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~ 84 (360)
T TIGR00858 15 GRRLLNFSSNDYLGLASHPEVIQAAQQGA-EQYGAGSTASRLVSGNSPLHEELE----EELAEWKGTEA-----ALLFSS 84 (360)
T ss_pred CceEEecccCCcccCCCCHHHHHHHHHHH-HhcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCC-----EEEECc
Confidence 3344445556753 589999998764 5677776666665665 3334555 67889998654 699999
Q ss_pred CchhHHHHHHhhCCc-------------------------------------ccc------cccEEEEcCcccc---ccc
Q psy10669 105 GSPANFAVCEKALPT-------------------------------------NNA------RFDFLSSGTTCYS---RCL 138 (337)
Q Consensus 105 gt~AN~~v~~aLl~~-------------------------------------~~a------~pklII~~~S~~~---~~~ 138 (337)
|+.+++.++.+++++ +.. ++++|+++ +.+. ...
T Consensus 85 G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~-~~~~~~G~~~ 163 (360)
T TIGR00858 85 GYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTD-GVFSMDGDIA 163 (360)
T ss_pred hHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEe-CCccCCCCCc
Confidence 999888877888654 000 13566655 4544 356
Q ss_pred ChHHHHHHhhhcCCeEEEeccccccccce------------------eeeecc-----CCchhhh--hHHHHHhhccCCC
Q psy10669 139 DYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVTK-----TGEKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~~-----~Gg~i~~--~l~~~i~~~~~p~ 193 (337)
|+++|.++|+++|+++++|++|..|.++. +.+|.+ .||+++. ++.+.+.....+.
T Consensus 164 ~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~ 243 (360)
T TIGR00858 164 PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDYLINRARTL 243 (360)
T ss_pred CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcCHHHHHHHHHhCccc
Confidence 89999999999999999999998776531 123332 3777765 5666665444443
Q ss_pred C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 194 L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 194 ~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
. .+++++..+++...++.... ..++.++++.++.++|.+.|.+.|+++.. ..+.++++.+.. +.+..++.+.|.
T Consensus 244 ~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~ 318 (360)
T TIGR00858 244 IFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGFTLMP--SCTPIVPVIIGD-NASALALAEELQ 318 (360)
T ss_pred eecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCCccCC--CCCCEEEEEeCC-HHHHHHHHHHHH
Confidence 3 34455666667667775542 34677899999999999999999888764 445677777753 235678888888
Q ss_pred hcCceec
Q psy10669 273 EIAIACN 279 (337)
Q Consensus 273 ~~gI~v~ 279 (337)
+.||.+.
T Consensus 319 ~~gI~v~ 325 (360)
T TIGR00858 319 QQGIFVG 325 (360)
T ss_pred HCCeeEe
Confidence 8899996
No 39
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.61 E-value=1.9e-13 Score=131.73 Aligned_cols=242 Identities=14% Similarity=0.093 Sum_probs=164.1
Q ss_pred eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669 33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112 (337)
Q Consensus 33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v 112 (337)
++++|+..-+++.|.+++...+. + .++ . ...++...+++.++++||++.++ ..+...||+.|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~-----~---~~~-~---~~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPML-----G---HRS-P---EFLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCcc-----C---CCC-H---HHHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 57899999999999999964321 1 121 1 12233334457889999995421 124455668999888
Q ss_pred HHhhCCc-------------------------------------------cc---c-cccEEEEcCcc--cccccChHHH
Q psy10669 113 CEKALPT-------------------------------------------NN---A-RFDFLSSGTTC--YSRCLDYARF 143 (337)
Q Consensus 113 ~~aLl~~-------------------------------------------~~---a-~pklII~~~S~--~~~~~d~~~l 143 (337)
+.+++++ +. . +|++|++.... .+...|+++|
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i 146 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGI 146 (356)
T ss_pred HHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHH
Confidence 8888654 00 1 36788775333 5788999999
Q ss_pred HHHhhhcCCeEEEeccccccccc------e----eeeecc-----CC-chhhh--hHHHHHhh--ccCC-----------
Q psy10669 144 RQICDETDSIMFADMSHISGLIA------G----VKGVTK-----TG-EKILY--DYEEKINN--AVFP----------- 192 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~------g----~~~T~~-----~G-g~i~~--~l~~~i~~--~~~p----------- 192 (337)
.++|+++|+++++|++|..|... + +.+.+| .| |++.. ++.+.+.. ...+
T Consensus 147 ~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (356)
T cd06451 147 GALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKY 226 (356)
T ss_pred HHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhh
Confidence 99999999999999999988654 1 122232 23 66543 45454432 1111
Q ss_pred -----CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCe-EEEEEecCCCcchH
Q psy10669 193 -----SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVH-LILIDLRKNKLTGS 265 (337)
Q Consensus 193 -----~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h-~v~V~~~~~~~~~~ 265 (337)
+..++++++.++++..++..+.....++..++..++++++.+.|.+.|+++.+. ...++ +.++.+. .+.+..
T Consensus 227 ~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 305 (356)
T cd06451 227 WGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVP-EGVDGD 305 (356)
T ss_pred hcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECC-CCCCHH
Confidence 345678899999999999887765567889999999999999999999998752 11123 3344443 345778
Q ss_pred HHHHHHhhc-CceeccC------cccchhhh
Q psy10669 266 KVELVLEEI-AIACNKN------TGISLAAE 289 (337)
Q Consensus 266 ~~~~~L~~~-gI~v~~~------~girig~~ 289 (337)
.+.+.|.+. ||.+..- ..||++..
T Consensus 306 ~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~ 336 (356)
T cd06451 306 EVVRRLMKRYNIEIAGGLGPTAGKVFRIGHM 336 (356)
T ss_pred HHHHHHHHhCCEEEecccccccCCEEEEecC
Confidence 888999886 9998642 16787653
No 40
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.61 E-value=1.3e-13 Score=137.03 Aligned_cols=252 Identities=15% Similarity=0.188 Sum_probs=169.2
Q ss_pred hcccceeeeccCCC----CCH----HHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcce
Q psy10669 28 RQINGIELIASENF----TSL----AVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCN 99 (337)
Q Consensus 28 rq~~~i~l~asen~----~~p----~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~ 99 (337)
.+....-++.++.. +++ .+.+++...+.. |.-.|++.....++| +.++++||.++ .
T Consensus 8 ~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~-------gd~~Y~~~~g~~~Le----eaia~~~g~~~-----v 71 (431)
T cd00617 8 EAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML-------GDEAYAGSKSFYDLE----DAVQDLFGFKH-----I 71 (431)
T ss_pred HcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh-------CCCccCCCCCHHHHH----HHHHHHHCCCe-----E
Confidence 34445556667766 233 343443433321 112255555567887 57789999986 5
Q ss_pred eecCCCchhHHHHHHhhCCc-----------------------------c--------------c-------c---c---
Q psy10669 100 VQPYSGSPANFAVCEKALPT-----------------------------N--------------N-------A---R--- 123 (337)
Q Consensus 100 v~~~Sgt~AN~~v~~aLl~~-----------------------------~--------------~-------a---~--- 123 (337)
+..+||+.|+..++.+++++ . + + +
T Consensus 72 v~t~~Gt~Al~la~~al~~pGD~V~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~ 151 (431)
T cd00617 72 IPTHQGRGAENILFSILLKPGRTVPSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAE 151 (431)
T ss_pred EEcCCHHHHHHHHHHHhCCCCCEEccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCC
Confidence 77788899999889998764 0 0 0 1
Q ss_pred -ccEEEEcCccc---ccccCh---HHHHHHhhhcCCeEEEecccccc---cc--------c---------------eeee
Q psy10669 124 -FDFLSSGTTCY---SRCLDY---ARFRQICDETDSIMFADMSHISG---LI--------A---------------GVKG 170 (337)
Q Consensus 124 -pklII~~~S~~---~~~~d~---~~l~eia~~~ga~l~vD~AH~~G---li--------~---------------g~~~ 170 (337)
+++|+++-+++ +.+.+. +++.++|+++|++|+.|+||.++ ++ . ..+.
T Consensus 152 ~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~m 231 (431)
T cd00617 152 NIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTM 231 (431)
T ss_pred CccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEE
Confidence 35666653333 456644 46679999999999999999875 21 1 1233
Q ss_pred eccC------Cchhhh---hHHHHHhhcc--CCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669 171 VTKT------GEKILY---DYEEKINNAV--FPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 171 T~~~------Gg~i~~---~l~~~i~~~~--~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~ 237 (337)
+++| ||++++ ++.++++... +++. +|+.+...++++++++.+..+ .+|.++.+++.++|.+.|.
T Consensus 232 S~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~ 308 (431)
T cd00617 232 SAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLD 308 (431)
T ss_pred EeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHH
Confidence 4444 888886 3777776432 2332 577888888999889887533 3677777888899999999
Q ss_pred hCCCEEecCCCCCeEEEEEecCC-------CcchHHHH-HHHhhcCceeccCc-------------------ccchhhhh
Q psy10669 238 KRGYHVVTGGTDVHLILIDLRKN-------KLTGSKVE-LVLEEIAIACNKNT-------------------GISLAAEI 290 (337)
Q Consensus 238 ~~G~~v~~~~t~~h~v~V~~~~~-------~~~~~~~~-~~L~~~gI~v~~~~-------------------girig~~~ 290 (337)
+.|+.+.. ...+|.+++|+... ++++..+. .++++.||.+.... ++||++|
T Consensus 309 ~~G~~v~~-P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p- 386 (431)
T cd00617 309 EAGVPIVE-PAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP- 386 (431)
T ss_pred HCCCCccC-CCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc-
Confidence 99999885 36789999998752 22455555 66667899964311 8999998
Q ss_pred HhhhCCCHHHHH
Q psy10669 291 QAISGPKLVDFQ 302 (337)
Q Consensus 291 ~t~~G~~~~~~~ 302 (337)
||+++...+.
T Consensus 387 --rr~~t~~~~~ 396 (431)
T cd00617 387 --RRVYTQDHMD 396 (431)
T ss_pred --ccccCHHHHH
Confidence 7898866554
No 41
>PRK02948 cysteine desulfurase; Provisional
Probab=99.60 E-value=8.6e-14 Score=135.73 Aligned_cols=234 Identities=13% Similarity=0.089 Sum_probs=158.2
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
++...+++.|++++...+.. + .+++++.+..| .....+...+++.+++++|+++ .+|.+++| +.+|..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~----~~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQ-Y-FGNESSLHDIG-GTASSLLQVCRKTFAEMIGGEE----QGIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHh-c-CCCCccccHHH-HHHHHHHHHHHHHHHHHhCCCC----CeEEEeCcHHHHHHHHHHH
Confidence 45567799999999765543 2 35555444344 3334455567789999999876 36888777 7888777777
Q ss_pred hC----Cc------------------------------------------cc--c---cccEEEEcCcc--cccccChHH
Q psy10669 116 AL----PT------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYAR 142 (337)
Q Consensus 116 Ll----~~------------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~ 142 (337)
++ ++ .+ + ++++|++...+ .+...|+++
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~ 159 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAE 159 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHH
Confidence 64 21 01 1 25777776333 368889999
Q ss_pred HHHHhhhcCCeEEEeccccccccc---------eeeeecc-----CC-chhh-h-hHHHHHhhc------cCCCCCCCCc
Q psy10669 143 FRQICDETDSIMFADMSHISGLIA---------GVKGVTK-----TG-EKIL-Y-DYEEKINNA------VFPSLQGGPH 199 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~-----~G-g~i~-~-~l~~~i~~~------~~p~~~g~~~ 199 (337)
|.++|+++|++++||++|..|.+. .+.+|.+ .| |++. . ++ .+.+. ......++++
T Consensus 160 I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~~t~~ 237 (381)
T PRK02948 160 IGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV--RWKPVFPGTTHEKGFRPGTVN 237 (381)
T ss_pred HHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCC--CCCCcccCCCCCCCcCCCCcc
Confidence 999999999999999999999664 1333432 33 4443 2 22 01111 1122468999
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE--EEEecCCCcchHHHHHHHhhcCce
Q psy10669 200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI--LIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v--~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
.+.++++..++.++. ...++.++++.++.++|.+.|++.|+++...+..+++. ++.+...++++.++...|++.||.
T Consensus 238 ~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~ 316 (381)
T PRK02948 238 VPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIA 316 (381)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEE
Confidence 999999999998875 35678889999999999999999998766422223222 233333455677777888888999
Q ss_pred ecc
Q psy10669 278 CNK 280 (337)
Q Consensus 278 v~~ 280 (337)
+..
T Consensus 317 v~~ 319 (381)
T PRK02948 317 IST 319 (381)
T ss_pred EEc
Confidence 985
No 42
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.60 E-value=7.6e-14 Score=135.20 Aligned_cols=232 Identities=13% Similarity=0.033 Sum_probs=154.4
Q ss_pred HHHHHHHHHhhcccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCC
Q psy10669 18 LYSLIKKEKHRQINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLD 92 (337)
Q Consensus 18 ~~~~~~~e~~rq~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~ 92 (337)
-++.|.+...|..+ -+-+||+ +|.++++.... ..+|+ |+ ..+.++| +.+++++|.+
T Consensus 10 ~~~~~~~~~~~~~~----~~~~~ylgl~~~~~~~~~~~~~-~~~~~----------g~~~~~~~Le----~~lA~~~g~~ 70 (346)
T TIGR03576 10 ALEIIREKISRGGR----DSLYDLTGLAGGFKIDEEDLEL-LETYV----------GPAIFEEKVQ----ELGREHLGGP 70 (346)
T ss_pred HHHHHHHHHhccCC----ccccccccCCCChhHHHHHHHH-HHHhc----------CCHHHHHHHH----HHHHHHcCCC
Confidence 44555543333321 1348999 99999998765 55763 33 4446677 6889999995
Q ss_pred CCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------ccc---cccEEEEcCccc
Q psy10669 93 PEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------NNA---RFDFLSSGTTCY 134 (337)
Q Consensus 93 ~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------~~a---~pklII~~~S~~ 134 (337)
.+ ..+.++||+.||.+++.+|+++ .+. ++++||+++ +
T Consensus 71 ~e---~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~~~l~~l~~~~~~~lIiitg--~ 145 (346)
T TIGR03576 71 EE---KILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFESDELSELKKIDGTSLVVITG--S 145 (346)
T ss_pred cc---eEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEeccCCHHHHhhCcCceEEEEEC--C
Confidence 43 2467777799999999999653 101 267777764 3
Q ss_pred ccccCh---HH---HHHHhhhcCCeEEEeccccccccc-------------eeeeec------cCCchhhh--hHHHHHh
Q psy10669 135 SRCLDY---AR---FRQICDETDSIMFADMSHISGLIA-------------GVKGVT------KTGEKILY--DYEEKIN 187 (337)
Q Consensus 135 ~~~~d~---~~---l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~------~~Gg~i~~--~l~~~i~ 187 (337)
+|++|+ ++ |.++|+++|++++||+||..|+.+ .+++|+ .+||++++ ++.+.+.
T Consensus 146 s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~G~v~~~~~li~~l~ 225 (346)
T TIGR03576 146 TMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRGGLLAGRKELVDKIK 225 (346)
T ss_pred CCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccceEEEEeCHHHHHHHH
Confidence 777665 44 556678899999999999987643 123343 34788776 5778787
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV 267 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~ 267 (337)
....|..++ .+++..++...++... . .++.++.+.++.+.+.+.+.+ +.+.. +..--+++++...+ +...+
T Consensus 226 ~~~~~~~~s-~~~~~~~aa~~aL~~~-~--~~~~~~~l~~r~~~~~~~l~~--~~~~~--~~~~f~~~~~~~~~-~~~~~ 296 (346)
T TIGR03576 226 SVGEQFGLE-AQAPLLAAVVRALEEF-E--LSRIRDAFKRKEEVYLRLFDK--LNVER--TPTGFVIKGVEEEK-LIEIG 296 (346)
T ss_pred HhhcCcccC-ccHHHHHHHHHHHhhc-c--HHHHHHHHHHHHHHHHHHHHh--CCCCc--CCCeEEEEeCCCCC-HHHHH
Confidence 766776664 5666777777777553 2 246677888888888777773 54443 22225677775422 34677
Q ss_pred HHHHhhcCceeccCc
Q psy10669 268 ELVLEEIAIACNKNT 282 (337)
Q Consensus 268 ~~~L~~~gI~v~~~~ 282 (337)
.+.|++.||.+.+..
T Consensus 297 ~~ll~~~gV~v~~~~ 311 (346)
T TIGR03576 297 LDLLRNYGIITITAV 311 (346)
T ss_pred HHHHHhCCEEEeCCc
Confidence 788888999998743
No 43
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.60 E-value=3.2e-13 Score=131.76 Aligned_cols=231 Identities=17% Similarity=0.229 Sum_probs=157.4
Q ss_pred eeeeccCCC----CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 33 IELIASENF----TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 33 i~l~asen~----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
|+| ++.+| .+|.+.+++...+ .+++.++++.++..|.... ++++ +.+++++|.+. +|.++||++
T Consensus 45 i~l-~~~~~~~~~~~~~i~~a~~~~~-~~~~~~~~~~~~~~G~~~l~~~l~----~~la~~~g~~~-----~i~~tsG~~ 113 (397)
T PRK06939 45 INF-CANNYLGLANHPELIAAAKAAL-DSHGFGMASVRFICGTQDLHKELE----EKLAKFLGTED-----AILYSSCFD 113 (397)
T ss_pred EEe-eccCccccCCCHHHHHHHHHHH-HHcCCCCcccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcChHH
Confidence 554 44565 4899999998764 4555567777778887544 4565 57788999764 699999999
Q ss_pred hHHHHHHhhCCc----------------------------------------cc---c--cccEEEEcCcccc---cccC
Q psy10669 108 ANFAVCEKALPT----------------------------------------NN---A--RFDFLSSGTTCYS---RCLD 139 (337)
Q Consensus 108 AN~~v~~aLl~~----------------------------------------~~---a--~pklII~~~S~~~---~~~d 139 (337)
+|.+++.+++++ +. . ++++|+++ ++++ ...|
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~-~v~~~~G~~~~ 192 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATD-GVFSMDGDIAP 192 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEe-cCcCCCCCcCC
Confidence 999999998764 00 1 24566665 3444 4568
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc----------e-------eeeec------cCCchhhh--hHHHHHhhccCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA----------G-------VKGVT------KTGEKILY--DYEEKINNAVFPSL 194 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~ 194 (337)
+++|.++|+++|++|++|++|..|++. + ++++. ..||+++. ++.+.+.....|..
T Consensus 193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~~l~~~~~~~~ 272 (397)
T PRK06939 193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRKEVIDWLRQRSRPYL 272 (397)
T ss_pred HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCHHHHHHHHHhCcccc
Confidence 889999999999999999999776542 1 12232 24677765 56666665444544
Q ss_pred CC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 195 QG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 195 ~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
.+ ++.+...+++..++..+. ..++.++++.++.+++.+.|.+.|+++.. .+..++++.+.. +.+..++.+.|.+
T Consensus 273 ~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~L~~ 347 (397)
T PRK06939 273 FSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGFTLGP--GEHPIIPVMLGD-AKLAQEFADRLLE 347 (397)
T ss_pred ccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEECC-HHHHHHHHHHHHH
Confidence 43 444444555555565553 35688899999999999999998887754 344555444432 2345667777777
Q ss_pred cCceecc
Q psy10669 274 IAIACNK 280 (337)
Q Consensus 274 ~gI~v~~ 280 (337)
.||.+..
T Consensus 348 ~gI~v~~ 354 (397)
T PRK06939 348 EGVYVIG 354 (397)
T ss_pred CCceEee
Confidence 7998863
No 44
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.59 E-value=2.6e-13 Score=131.78 Aligned_cols=235 Identities=14% Similarity=0.183 Sum_probs=158.8
Q ss_pred ccceeeeccCC--C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 30 INGIELIASEN--F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen--~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
+.-|.+...+| + .+|.|.+++...+ .+|..++++.+...|.... ++++ +++++++|.+. .+.+++|
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~g 108 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAA-RRYGAGSGGSRLVTGNSPAHEALE----EELAEWFGAER-----ALLFSSG 108 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHH-HhcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEECcH
Confidence 34455665554 2 4799999998765 4676666666665565333 4444 57889998643 6888899
Q ss_pred chhHHHHHHhhCCc-------------------------------------cc--cc---ccEEEEcCcccc---cccCh
Q psy10669 106 SPANFAVCEKALPT-------------------------------------NN--AR---FDFLSSGTTCYS---RCLDY 140 (337)
Q Consensus 106 t~AN~~v~~aLl~~-------------------------------------~~--a~---pklII~~~S~~~---~~~d~ 140 (337)
+.+|..++.+++++ +. .. +.+++++ +.++ ...|+
T Consensus 109 ~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~-~~~~~~G~~~~l 187 (385)
T PRK05958 109 YAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTE-SVFSMDGDLAPL 187 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEE-ecccCCCCcCCH
Confidence 99988877887664 00 01 2455554 4443 46789
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc--e----------------eeeec-c----CCchhhh--hHHHHHhhccCCCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA--G----------------VKGVT-K----TGEKILY--DYEEKINNAVFPSLQ 195 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~--g----------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~~ 195 (337)
++|.++|+++|+++++|++|..|+++ | +.+|. | .||+++. ++.+.+.....+..+
T Consensus 188 ~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~~ 267 (385)
T PRK05958 188 AELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSETLIDYLINRARPFIF 267 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCCcEEEcCHHHHHHHHHhCcccee
Confidence 99999999999999999999877653 1 12232 2 3677665 466655544344443
Q ss_pred -CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 196 -GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 196 -g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
+++++..++++..++..+.. .++.++++.++.+++.+.|.+.|+++.. ..+.++++.+.. ..+..++.+.|.+.
T Consensus 268 ~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~~~ 342 (385)
T PRK05958 268 TTALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRALGFQLMD--SQSAIQPLIVGD-NERALALAAALQEQ 342 (385)
T ss_pred cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEeCC-HHHHHHHHHHHHHC
Confidence 34566666666666666532 2678899999999999999999988765 456677777653 23566788888888
Q ss_pred Cceecc
Q psy10669 275 AIACNK 280 (337)
Q Consensus 275 gI~v~~ 280 (337)
||.+.+
T Consensus 343 gI~v~~ 348 (385)
T PRK05958 343 GFWVGA 348 (385)
T ss_pred CceEec
Confidence 999974
No 45
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.59 E-value=9.8e-15 Score=143.38 Aligned_cols=201 Identities=19% Similarity=0.245 Sum_probs=138.6
Q ss_pred HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669 77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------ 119 (337)
Q Consensus 77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------ 119 (337)
....++++++++||++. ....+.| |.+|.+++.+++++
T Consensus 67 ~I~eAe~~aA~~fGAd~-----t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~g 141 (417)
T PF01276_consen 67 IIKEAEELAARAFGADK-----TFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYG 141 (417)
T ss_dssp HHHHHHHHHHHHHTESE-----EEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS
T ss_pred HHHHHHHHHHHhcCCCe-----EEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccC
Confidence 44456689999999996 5666788 57899999999876
Q ss_pred ------c-----------ccc------cc-EEEEcCcccccccChHHHHHHhhhcCCeEEEeccccc--cccc-------
Q psy10669 120 ------N-----------NAR------FD-FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS--GLIA------- 166 (337)
Q Consensus 120 ------~-----------~a~------pk-lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~--Gli~------- 166 (337)
. +.+ |+ ++|+.++.|+...|+++|.++|+++|.+|+||+||++ ++..
T Consensus 142 i~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~ 221 (417)
T PF01276_consen 142 IIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA 221 (417)
T ss_dssp -BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred CccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence 0 011 23 5556688889999999999999999999999999987 1111
Q ss_pred ------------eeeeecc------CCchhhh--h--H-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHH
Q psy10669 167 ------------GVKGVTK------TGEKILY--D--Y-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQA 223 (337)
Q Consensus 167 ------------g~~~T~~------~Gg~i~~--~--l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~ 223 (337)
.+.|||| +++++.. + + .++++.+..-..+++|..+.+|++.+|..+|...++++..+
T Consensus 222 ~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~ 301 (417)
T PF01276_consen 222 LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLE 301 (417)
T ss_dssp TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 2457776 3444422 2 2 45667664444578999999999999999984467899999
Q ss_pred HHHHHHHHHHHHHHh----CCCEEecC-----C-----------------------CCCeEEEEEe---------cCCCc
Q psy10669 224 QVKANASHLSDEMIK----RGYHVVTG-----G-----------------------TDVHLILIDL---------RKNKL 262 (337)
Q Consensus 224 ~v~~na~~l~~~L~~----~G~~v~~~-----~-----------------------t~~h~v~V~~---------~~~~~ 262 (337)
+.+++++.+++++++ .+|++.+. . -|.--+.|.+ +..|+
T Consensus 302 ~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi 381 (417)
T PF01276_consen 302 EAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGI 381 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS--
T ss_pred HHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCC
Confidence 999999999999943 56666541 1 1444566776 67899
Q ss_pred chHHHHHHHhhcCceeccCc
Q psy10669 263 TGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 263 ~~~~~~~~L~~~gI~v~~~~ 282 (337)
++.++.+.|.+.||.+++..
T Consensus 382 ~g~~~~~~L~~~~I~~Ek~d 401 (417)
T PF01276_consen 382 PGYIVEKYLREHGIQVEKTD 401 (417)
T ss_dssp -HHHHHHHHHHTTEE-SEEE
T ss_pred CHHHHHHHHHHcCCEEEecc
Confidence 99999999999999999855
No 46
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.58 E-value=5.1e-13 Score=129.32 Aligned_cols=258 Identities=15% Similarity=0.166 Sum_probs=165.2
Q ss_pred cHHHHHHHHHHHhhccc--ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC
Q psy10669 15 DPELYSLIKKEKHRQIN--GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD 92 (337)
Q Consensus 15 d~~~~~~~~~e~~rq~~--~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~ 92 (337)
+.|+.+++++-.+++.. .| |=.+..+.+|.+.+++...+... .|.+ +.+.+. .+++..+++.+++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~--~~~~--~~~~~~---~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETN--LGDP--GLFPGT---AKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcC--CCCc--ccCccH---HHHHHHHHHHHHHHhCCC
Confidence 56777777654444221 22 33335666899999987654432 2333 224442 345556678999999987
Q ss_pred CCCCcceeecCCCchhHHHHHHhhCC------c-------------------------------------cc--c---cc
Q psy10669 93 PEQWGCNVQPYSGSPANFAVCEKALP------T-------------------------------------NN--A---RF 124 (337)
Q Consensus 93 ~~~~~~~v~~~Sgt~AN~~v~~aLl~------~-------------------------------------~~--a---~p 124 (337)
.+ ..+...+|+.||..++.++.. + .+ + ++
T Consensus 76 ~~---~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~ 152 (371)
T PRK13520 76 DA---YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNT 152 (371)
T ss_pred CC---CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCC
Confidence 63 124455668999887665521 1 01 1 14
Q ss_pred cEEEEcC--cccccccChHHHHHHhhhcCCeEEEeccccccccc-------------ee---e-eecc-------CCchh
Q psy10669 125 DFLSSGT--TCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------------GV---K-GVTK-------TGEKI 178 (337)
Q Consensus 125 klII~~~--S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~---~-~T~~-------~Gg~i 178 (337)
++|++.. +..+...|+++|.++|+++|++++||+||+.|.++ ++ + +++| .|+++
T Consensus 153 ~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~ 232 (371)
T PRK13520 153 IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGIL 232 (371)
T ss_pred EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEE
Confidence 4455332 34678899999999999999999999999866532 11 1 1222 13344
Q ss_pred hh--hHHHHHhhccCCCC--------CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669 179 LY--DYEEKINNAVFPSL--------QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT 248 (337)
Q Consensus 179 ~~--~l~~~i~~~~~p~~--------~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t 248 (337)
+. ++.+.+.. ..|+. .||++.+.++++..++..+.+..+++++++..+++++|.+.|.+.|++++.. .
T Consensus 233 ~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~ 310 (371)
T PRK13520 233 FRDESYLDALAV-DTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIE-P 310 (371)
T ss_pred EcCHHHHHhhcc-cCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecC-C
Confidence 33 35454431 12332 2455666788888888776555678899999999999999999999984432 4
Q ss_pred CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669 249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT---GISLAAE 289 (337)
Q Consensus 249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~---girig~~ 289 (337)
..+++.+.+. ++.++.+.|.+.||.+.... .+||+..
T Consensus 311 ~~~~v~~~~~----~~~~v~~~L~~~gi~v~~~~~~~~iRis~~ 350 (371)
T PRK13520 311 VLNIVAFDDP----NPDEVREKLRERGWRVSVTRCPEALRIVCM 350 (371)
T ss_pred CceEEEEecC----CHHHHHHHHHHCCceeccCCCCCEEEEEEE
Confidence 5666666553 46788888988899987643 5888643
No 47
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.57 E-value=6.7e-13 Score=129.32 Aligned_cols=233 Identities=16% Similarity=0.194 Sum_probs=157.9
Q ss_pred cceeeeccC--CC-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCc
Q psy10669 31 NGIELIASE--NF-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS 106 (337)
Q Consensus 31 ~~i~l~ase--n~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt 106 (337)
+-|+|...+ .+ .+|.+.+++... ..+|+.+.++.+...|.... ++++ +++++++|.+. ++.++||+
T Consensus 34 ~~id~~~~~~~g~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~g~~~l~~~l~----~~l~~~~g~~~-----~i~~~sG~ 103 (385)
T TIGR01825 34 EVINLSSNNYLGFADHPRLKEAAAQA-IQQYGVGAGAVRTIAGTLRLHEELE----EKLAKFKKTEA-----ALVFQSGF 103 (385)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHH-HHHcCCCCCccCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEECcHH
Confidence 346665432 23 599999998765 44565555566677777544 4555 57788899764 68899999
Q ss_pred hhHHHHHHhhCCc-------------------------------------c-c--c---cccEEEEcCccc---ccccCh
Q psy10669 107 PANFAVCEKALPT-------------------------------------N-N--A---RFDFLSSGTTCY---SRCLDY 140 (337)
Q Consensus 107 ~AN~~v~~aLl~~-------------------------------------~-~--a---~pklII~~~S~~---~~~~d~ 140 (337)
.+|+.++.+++++ + + . ++++|++++ .+ +...|+
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~-v~~~tG~~~~~ 182 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDG-VFSMDGDVAPL 182 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEec-CCcCCCCccCH
Confidence 9999888888764 0 0 1 246777663 33 345689
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc----------e-------eeeec-c----CCchhhh--hHHHHHhhccCCCCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA----------G-------VKGVT-K----TGEKILY--DYEEKINNAVFPSLQG 196 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~~g 196 (337)
++|.++|+++|+++++|++|..|.++ + +.+|. | .||+++. ++.+.+.....+..++
T Consensus 183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~ 262 (385)
T TIGR01825 183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVGGYAAGHKELIEYLKNRARPFLFS 262 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCCCEEecCHHHHHHHHHhCcccccc
Confidence 99999999999999999999877543 1 12333 2 3677765 5666665543444444
Q ss_pred C-CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 197 G-PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 197 ~-~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
+ ++++..+++..++..+.+ ..++.+++.++.+++.+.|.+.|+++.. ++.+++++.+... .+..++.+.|.+.|
T Consensus 263 ~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~-~~~~~~~~~L~~~g 337 (385)
T TIGR01825 263 TAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGG--SETPITPVVIGDE-KAAQEFSRRLFDEG 337 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEECCH-HHHHHHHHHHHHCC
Confidence 4 566777777777766532 3467888899999999999999998865 4455666655432 24556667776669
Q ss_pred ceec
Q psy10669 276 IACN 279 (337)
Q Consensus 276 I~v~ 279 (337)
|.+.
T Consensus 338 i~v~ 341 (385)
T TIGR01825 338 IFAQ 341 (385)
T ss_pred cEEc
Confidence 9985
No 48
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.57 E-value=4.3e-13 Score=130.15 Aligned_cols=230 Identities=14% Similarity=0.146 Sum_probs=153.3
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT- 119 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~- 119 (337)
.|+.|++++...+. ++. +.++...|.-..........+++.++++||++.+ .+|.+++| +.++..++.+++++
T Consensus 12 ~p~~v~~a~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~g~t~al~~~~~~~~~~g 86 (376)
T TIGR01977 12 KPDEVYEAMADFYK-NYG-GSPGRGRYRLALRASREVEETRQLLAKLFNAPSS---AHVVFTNNATTALNIALKGLLKEG 86 (376)
T ss_pred CCHHHHHHHHHHHH-hcC-CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC---CeEEEeCCHHHHHHHHHHhccCCC
Confidence 57899999976644 332 2333332321111223334455789999998752 25777655 77877777887653
Q ss_pred --------------------------------------------ccc---cccEEEEcCc--ccccccChHHHHHHhhhc
Q psy10669 120 --------------------------------------------NNA---RFDFLSSGTT--CYSRCLDYARFRQICDET 150 (337)
Q Consensus 120 --------------------------------------------~~a---~pklII~~~S--~~~~~~d~~~l~eia~~~ 150 (337)
+.+ +|++|++... ..+...|+++|.++|+++
T Consensus 87 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~ 166 (376)
T TIGR01977 87 DHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQEN 166 (376)
T ss_pred CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHc
Confidence 001 2677777632 246889999999999999
Q ss_pred CCeEEEeccccccccc------e---ee-eecc-----CC--chhhh-hHHHHHhhccC------------------CCC
Q psy10669 151 DSIMFADMSHISGLIA------G---VK-GVTK-----TG--EKILY-DYEEKINNAVF------------------PSL 194 (337)
Q Consensus 151 ga~l~vD~AH~~Gli~------g---~~-~T~~-----~G--g~i~~-~l~~~i~~~~~------------------p~~ 194 (337)
|+++++|++|++|.+. + +. +++| .| ++++. +. .+.+... .+-
T Consensus 167 ~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 244 (376)
T TIGR01977 167 GIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSALIDQPSELPDRFE 244 (376)
T ss_pred CCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCccccccccccccchhhcc
Confidence 9999999999999886 1 22 2332 23 34444 21 1111100 123
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecC-CC--CCeEEEEEecCCCcchHHHHHH
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTG-GT--DVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~-~t--~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
.||++.+.++++..+++++.+...+..+++..++++++.+.|.+ .|+++++. .+ ..+++.+.+ .+.++.++.+.
T Consensus 245 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~ 322 (376)
T TIGR01977 245 SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTV--EGIDSEEVADI 322 (376)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEE--CCCCHHHHHHH
Confidence 57899999999999999987666678889999999999999986 67888752 12 234555554 45678889999
Q ss_pred Hhhc-Cceecc
Q psy10669 271 LEEI-AIACNK 280 (337)
Q Consensus 271 L~~~-gI~v~~ 280 (337)
|.+. ||.+..
T Consensus 323 L~~~~gi~v~~ 333 (376)
T TIGR01977 323 LDEKFDIATRT 333 (376)
T ss_pred HhccCCEEEEc
Confidence 9875 999865
No 49
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.56 E-value=6.4e-13 Score=131.69 Aligned_cols=237 Identities=12% Similarity=0.076 Sum_probs=158.6
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcC-cCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRY-YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC 113 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~-~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~ 113 (337)
.++-..+++.|++++...+...+ +++.++. +.+.+..+.+ ..+|+.+++++|++.+ -+|.+++| |.++..++
T Consensus 38 ~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~r~~la~~~~~~~~---~~v~~t~g~t~al~~i~ 111 (424)
T PLN02855 38 NAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALSAKATDAY-ELARKKVAAFINASTS---REIVFTRNATEAINLVA 111 (424)
T ss_pred CccccCCCHHHHHHHHHHHHhcC--CCCCCccchHHHHHHHHH-HHHHHHHHHHcCCCCC---CEEEEeCCHHHHHHHHH
Confidence 36666779999999977654332 3443322 2222333333 4678899999999642 26888777 66755555
Q ss_pred Hhh----CCc-------------------------------------------cc-----ccccEEEEcCcc--cccccC
Q psy10669 114 EKA----LPT-------------------------------------------NN-----ARFDFLSSGTTC--YSRCLD 139 (337)
Q Consensus 114 ~aL----l~~-------------------------------------------~~-----a~pklII~~~S~--~~~~~d 139 (337)
.++ +++ .+ .++++|++.+-+ .+...|
T Consensus 112 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~ 191 (424)
T PLN02855 112 YTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILP 191 (424)
T ss_pred HHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCC
Confidence 542 222 00 126888887433 368999
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhhh--hHHHHHhhcc------------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKILY--DYEEKINNAV------------ 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~~--~l~~~i~~~~------------ 190 (337)
+++|.++|+++|+++++|++|..|.+. + ++++ +| .| |++.. ++.+++.+..
T Consensus 192 ~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~ 271 (424)
T PLN02855 192 VEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLD 271 (424)
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCccEEEEEchhhhhcCCCEecCCCceeeeecC
Confidence 999999999999999999999998776 1 2233 32 34 45432 4444333210
Q ss_pred ----C--C--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC---C--CeEEEEE
Q psy10669 191 ----F--P--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT---D--VHLILID 256 (337)
Q Consensus 191 ----~--p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t---~--~h~v~V~ 256 (337)
. | +-.||++.+.++++..++..+.+...++.++++.+.+++|++.|.+. |+++++... + +.++.+.
T Consensus 272 ~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~ 351 (424)
T PLN02855 272 HSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFN 351 (424)
T ss_pred ccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEE
Confidence 0 1 22689999999999999998876667788899999999999999885 999986311 1 2344444
Q ss_pred ecCCCcchHHHHHHHhhc-Cceecc
Q psy10669 257 LRKNKLTGSKVELVLEEI-AIACNK 280 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~~-gI~v~~ 280 (337)
+ .+.++.++.+.|.+. ||.+..
T Consensus 352 ~--~~~~~~~v~~~L~~~~gI~v~~ 374 (424)
T PLN02855 352 V--EGIHPTDLSTFLDQQHGVAIRS 374 (424)
T ss_pred E--CCcCHHHHHHHhcccCCEEEec
Confidence 4 456778889999875 998774
No 50
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.56 E-value=8e-13 Score=128.25 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=166.3
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE 114 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~ 114 (337)
.++...+|+.+.+++...+... .++|.++.+.......+....+++.++++||.+.+ .++.+++| +.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~g~t~a~~~~~~ 79 (373)
T cd06453 5 NAATSQKPQPVIDAIVDYYRHY--NANVHRGVHELSARATDAYEAAREKVARFINAPSP---DEIIFTRNTTEAINLVAY 79 (373)
T ss_pred CccccCCCHHHHHHHHHHHHhc--CCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCCHHHHHHHHHH
Confidence 4577788999999998776532 35666655555555555555667899999999833 35666666 677555556
Q ss_pred hhCC---c---------------------------------------------c--cc-cccEEEEcCcc--cccccChH
Q psy10669 115 KALP---T---------------------------------------------N--NA-RFDFLSSGTTC--YSRCLDYA 141 (337)
Q Consensus 115 aLl~---~---------------------------------------------~--~a-~pklII~~~S~--~~~~~d~~ 141 (337)
++.. + + +. ++++|++.... .+...|++
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~ 159 (373)
T cd06453 80 GLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVK 159 (373)
T ss_pred HhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHH
Confidence 7644 3 0 01 26888876443 35888999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhhh--hHHHHHhhccCC------------
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKILY--DYEEKINNAVFP------------ 192 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~~--~l~~~i~~~~~p------------ 192 (337)
+|.++|+++|++|++|++|..|.+. + ++++ +| .| |+++. ++.+.+.+....
T Consensus 160 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (373)
T cd06453 160 EIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET 239 (373)
T ss_pred HHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcccccccccc
Confidence 9999999999999999999998775 1 2233 23 23 65544 344444432110
Q ss_pred --------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc
Q psy10669 193 --------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL 262 (337)
Q Consensus 193 --------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~ 262 (337)
...|+++.+.+.++..+++++.+...++.+++..++++++.+.|.+. |++++.. ....+++.+.+. +.
T Consensus 240 ~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~ 317 (373)
T cd06453 240 TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE--GI 317 (373)
T ss_pred ccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC--Cc
Confidence 11368889999999999999876666888899999999999999886 7888742 235667777664 35
Q ss_pred chHHHHHHHhhcCceecc
Q psy10669 263 TGSKVELVLEEIAIACNK 280 (337)
Q Consensus 263 ~~~~~~~~L~~~gI~v~~ 280 (337)
+..++.+.|.+.||.+..
T Consensus 318 ~~~~i~~~l~~~gi~i~~ 335 (373)
T cd06453 318 HPHDVATILDQYGIAVRA 335 (373)
T ss_pred CHHHHHHHHHHCCEEecc
Confidence 677888899889998753
No 51
>PLN02651 cysteine desulfurase
Probab=99.55 E-value=2.8e-13 Score=131.58 Aligned_cols=232 Identities=15% Similarity=0.140 Sum_probs=156.9
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
++-..+++.|++++...+.+. .++|+++.+.-.....++...++++++++||+++. +|.+++| |.++..++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEH--FGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK----EIIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhC--CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 344567999999998765543 36666533322233445555678899999999862 5777666 6776555554
Q ss_pred h----CCc------------------------------------------cc--c---cccEEEEcCcc--cccccChHH
Q psy10669 116 A----LPT------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYAR 142 (337)
Q Consensus 116 L----l~~------------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~ 142 (337)
+ .++ .+ + +++++++...+ .+...|+++
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~ 159 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEE 159 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHH
Confidence 4 222 00 0 25778776433 468899999
Q ss_pred HHHHhhhcCCeEEEeccccccccc------e---e-eeecc----CC-chh-hh-hHHHHHhhccC------CCCCCCCc
Q psy10669 143 FRQICDETDSIMFADMSHISGLIA------G---V-KGVTK----TG-EKI-LY-DYEEKINNAVF------PSLQGGPH 199 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~Gli~------g---~-~~T~~----~G-g~i-~~-~l~~~i~~~~~------p~~~g~~~ 199 (337)
|.++|+++|++++||++|++|.+. + + .+.+| .| |++ +. +..+.+++... ....||++
T Consensus 160 I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~ 239 (364)
T PLN02651 160 IGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTEN 239 (364)
T ss_pred HHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccCCccCCCcc
Confidence 999999999999999999999876 1 2 23333 33 443 33 22223332221 23478999
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCC---CeEEEEEecCCCcchHHHHHHHhh
Q psy10669 200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTD---VHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~---~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
.+.++++..++..+.+ ..+..+++..+.+++|.+.|.+ .|+++++. ..+ ++++.+.+ .++++.++.+.|.+
T Consensus 240 ~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~L~~ 316 (364)
T PLN02651 240 TPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSF--AYVEGESLLMGLKE 316 (364)
T ss_pred HHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEe--CCCCHHHHHHHhCC
Confidence 9999999999999864 5677788999999999999875 39999873 222 33555544 46788899999976
Q ss_pred cCceec
Q psy10669 274 IAIACN 279 (337)
Q Consensus 274 ~gI~v~ 279 (337)
|.+.
T Consensus 317 --i~v~ 320 (364)
T PLN02651 317 --VAVS 320 (364)
T ss_pred --EEEE
Confidence 6665
No 52
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.51 E-value=1e-12 Score=130.17 Aligned_cols=227 Identities=15% Similarity=0.250 Sum_probs=155.5
Q ss_pred eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669 35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF 110 (337)
Q Consensus 35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~ 110 (337)
++.|+++. |..+-.+|.... ++.-.-|.-.|+|.....++| +.++++||.++ .|-.+||+.|+.
T Consensus 40 ~l~~~~v~IDLlSDS~T~aMs~~q---~a~~~vGDd~Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ 107 (460)
T PRK13237 40 LLRSEDVYIDLLTDSGTNAMSDRQ---WAGMMIGDEAYAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAEN 107 (460)
T ss_pred cCCcCcEEEECcccCCchhccHHH---HHHHhhcchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHH
Confidence 45566554 444445543320 111233555677777888999 47789999996 688889999977
Q ss_pred HHHHhhCCc--------------------------------------------------ccc-cc---------cEEEEc
Q psy10669 111 AVCEKALPT--------------------------------------------------NNA-RF---------DFLSSG 130 (337)
Q Consensus 111 ~v~~aLl~~--------------------------------------------------~~a-~p---------klII~~ 130 (337)
.++...+++ +.+ ++ ++++..
T Consensus 108 ll~~l~v~pGd~Vp~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itv 187 (460)
T PRK13237 108 LLSRIAIKPGQYVPGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTV 187 (460)
T ss_pred HHHHhCCCCcCEECCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEec
Confidence 654433331 000 11 234433
Q ss_pred Cccc-cccc---ChHHHHHHhhhcCCeEEEecccccc---cc----c-------------------eee-eecc-----C
Q psy10669 131 TTCY-SRCL---DYARFRQICDETDSIMFADMSHISG---LI----A-------------------GVK-GVTK-----T 174 (337)
Q Consensus 131 ~S~~-~~~~---d~~~l~eia~~~ga~l~vD~AH~~G---li----~-------------------g~~-~T~~-----~ 174 (337)
..+ +.+. |+++++++|+++|+.|+.|+||..| +| + +++ |++| .
T Consensus 188 -n~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~ 266 (460)
T PRK13237 188 -NLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI 266 (460)
T ss_pred -ccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC
Confidence 233 3444 7788999999999999999999999 66 1 122 3222 3
Q ss_pred Cchhhh---hHHHHHhhc--cCCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669 175 GEKILY---DYEEKINNA--VFPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG 247 (337)
Q Consensus 175 Gg~i~~---~l~~~i~~~--~~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~ 247 (337)
||+|++ ++.++++.. +|+++ +|+..-.-++|+++++.|... .+|.++.++++++|++.|.+.|+.|+. +
T Consensus 267 GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~-p 342 (460)
T PRK13237 267 GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVE-P 342 (460)
T ss_pred ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceec-C
Confidence 899886 477777755 67776 444444689999999999864 289999999999999999999999996 3
Q ss_pred CCCeEEEEEecC-------CCcchHHHHHHHh-hcCcee
Q psy10669 248 TDVHLILIDLRK-------NKLTGSKVELVLE-EIAIAC 278 (337)
Q Consensus 248 t~~h~v~V~~~~-------~~~~~~~~~~~L~-~~gI~v 278 (337)
+..|.+.||... ..+.+..+...|. +.||..
T Consensus 343 ~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~ 381 (460)
T PRK13237 343 VGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRS 381 (460)
T ss_pred CCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCe
Confidence 667999999654 3455666666665 467764
No 53
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.50 E-value=3.3e-12 Score=124.00 Aligned_cols=236 Identities=15% Similarity=0.081 Sum_probs=153.0
Q ss_pred eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc---chHHHHHHHHHHHHHhhcCCCCCCCcceeecC--CCchh
Q psy10669 34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN---QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY--SGSPA 108 (337)
Q Consensus 34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~---~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~--Sgt~A 108 (337)
++.|.--.+|+.|++|+...+.+ |+ ++|+..|.-+ ....++...+|+++++|||++.+ + .|.|+ |||.|
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~-~--~vvf~~gs~T~a 75 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN-Y--KVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC-c--eEEEEcCCchHH
Confidence 45566667899999999987644 43 7777777766 34456777899999999998433 2 46663 46788
Q ss_pred HHHHHHhhCC---c-----------------------------c----c---------c---cccEEEEcCcccccccCh
Q psy10669 109 NFAVCEKALP---T-----------------------------N----N---------A---RFDFLSSGTTCYSRCLDY 140 (337)
Q Consensus 109 N~~v~~aLl~---~-----------------------------~----~---------a---~pklII~~~S~~~~~~d~ 140 (337)
+.++..+|++ + . . . ++|+|.+++...+.-..
T Consensus 76 ~~~~~~~l~~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~- 154 (355)
T cd00611 76 FAAVPLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVE- 154 (355)
T ss_pred HHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEE-
Confidence 7777788865 2 0 0 0 15777777555432222
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc------eeeee-c-----cCC-chhh-h-hHHHHHhhc------------cCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA------GVKGV-T-----KTG-EKIL-Y-DYEEKINNA------------VFPS 193 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~T-~-----~~G-g~i~-~-~l~~~i~~~------------~~p~ 193 (337)
+.++++.+|++++||++|++|.+. ++.++ + |.| |++. . ++.+++.+. -.|
T Consensus 155 --~~~i~~~~g~~~~VDa~qs~g~~~idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (355)
T cd00611 155 --FDEVPDTGGVPLVADMSSNILSRPIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNS- 231 (355)
T ss_pred --cceecccCCCeEEEEccccccCCCCCHHHhCEEEeecccccCCCceEEEEECHHHHhhcccCCCCcccHHHHHhcCC-
Confidence 336777799999999999999998 34444 3 334 4443 3 333322221 111
Q ss_pred CCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeE-EEEEecCCCc-chHHHHH
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHL-ILIDLRKNKL-TGSKVEL 269 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~-v~V~~~~~~~-~~~~~~~ 269 (337)
..+||+.+.+.++..+++++.+. ..+...++..+++++|.+.|.+. |+.......+.+. +++.+.-.+. ...+..+
T Consensus 232 ~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~ 311 (355)
T cd00611 232 LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLK 311 (355)
T ss_pred CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHH
Confidence 25899999999999999999766 57888999999999999999997 8521111111232 2355554442 1122324
Q ss_pred HHhhcCceec
Q psy10669 270 VLEEIAIACN 279 (337)
Q Consensus 270 ~L~~~gI~v~ 279 (337)
.+.+.||.+.
T Consensus 312 ~~~r~G~~~~ 321 (355)
T cd00611 312 EAEAAGMIGL 321 (355)
T ss_pred HHHHCCCccc
Confidence 5556788643
No 54
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.50 E-value=6.8e-12 Score=121.60 Aligned_cols=242 Identities=14% Similarity=0.058 Sum_probs=158.9
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANF 110 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~ 110 (337)
.+.|.|-=-.+++.|++++.... +. .+.+ ..++...+++.++++||+++.+ ..+.+ .|||.++.
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~------~~------~~~~-~~~~~~~~r~~la~l~~~~~~~--~~i~~t~~~t~al~ 68 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDW------CT------WDSD-YNIVVEQIRQQLLALATAEEGY--TSVLLQGSGTFAVE 68 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCC------CC------CChH-HHHHHHHHHHHHHHHhCCCCCc--eEEEEcCCCHHHHH
Confidence 34566666667899998876432 11 1123 3344456788999999997521 14555 45588988
Q ss_pred HHHHhhCCc-------------------------------------------cc--c-c--ccEEEEc--CcccccccCh
Q psy10669 111 AVCEKALPT-------------------------------------------NN--A-R--FDFLSSG--TTCYSRCLDY 140 (337)
Q Consensus 111 ~v~~aLl~~-------------------------------------------~~--a-~--pklII~~--~S~~~~~~d~ 140 (337)
.++.+++.+ +. . . ++++.+. ++..+...|+
T Consensus 69 ~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i 148 (363)
T TIGR02326 69 AVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPI 148 (363)
T ss_pred HHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcH
Confidence 888888543 00 0 1 3444433 4445788999
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhccC-----------
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNAVF----------- 191 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~~~----------- 191 (337)
++|.++|+++|++++||++|+.|.+. .++++ +| .| |++.. +..+++.+...
T Consensus 149 ~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (363)
T TIGR02326 149 EAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWR 228 (363)
T ss_pred HHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHH
Confidence 99999999999999999999998876 12333 33 35 66543 34333321111
Q ss_pred -----CC-CCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEE-EEEecCC-C
Q psy10669 192 -----PS-LQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLI-LIDLRKN-K 261 (337)
Q Consensus 192 -----p~-~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v-~V~~~~~-~ 261 (337)
++ ...+++++.+.++..++.++... .+++.++++.++.++|.+.|.+.|++++.. ...++++ .+.+... .
T Consensus 229 ~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 308 (363)
T TIGR02326 229 CMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPD 308 (363)
T ss_pred HHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCC
Confidence 11 12267889999999999888654 357788999999999999999999998752 2234433 3443322 2
Q ss_pred cchHHHHHHHhhcCceeccCc-----ccchhh
Q psy10669 262 LTGSKVELVLEEIAIACNKNT-----GISLAA 288 (337)
Q Consensus 262 ~~~~~~~~~L~~~gI~v~~~~-----girig~ 288 (337)
++...+.+.|.+.||.+.+-. .||||.
T Consensus 309 ~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~ 340 (363)
T TIGR02326 309 YRFADFYQRLKEQGFVIYPGKVSQVDCFRIGN 340 (363)
T ss_pred CCHHHHHHHHHHCCEEEECCcCCCCCEEEEec
Confidence 466778888988899996532 678873
No 55
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.50 E-value=3.1e-12 Score=124.66 Aligned_cols=232 Identities=15% Similarity=0.165 Sum_probs=154.3
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
++...+++.|++++...+... .|+|++.... .....++...+++.++++||++.. .|.+++| +.++..++.+
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~r~~la~~~g~~~~----~i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSF-GGEVGKAVEEAREQVAKLLGAEPD----EIIFTSGGTESDNTAIKS 78 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHH-HHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 455677999999998766543 4677653222 222334445677899999999852 4667655 7787666665
Q ss_pred hC---Cc---------------------------------------------ccc--cccEEEEcCc-c-cccccChHHH
Q psy10669 116 AL---PT---------------------------------------------NNA--RFDFLSSGTT-C-YSRCLDYARF 143 (337)
Q Consensus 116 Ll---~~---------------------------------------------~~a--~pklII~~~S-~-~~~~~d~~~l 143 (337)
++ ++ +.. +++++++... + .+...|+++|
T Consensus 79 ~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I 158 (379)
T TIGR03402 79 ALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEI 158 (379)
T ss_pred HHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHH
Confidence 52 21 000 2677776532 2 3699999999
Q ss_pred HHHhhhcCCeEEEeccccccccc------e---ee-eecc----CC-chhh-h-hHHHHHhhccC------CCCCCCCcH
Q psy10669 144 RQICDETDSIMFADMSHISGLIA------G---VK-GVTK----TG-EKIL-Y-DYEEKINNAVF------PSLQGGPHN 200 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~------g---~~-~T~~----~G-g~i~-~-~l~~~i~~~~~------p~~~g~~~~ 200 (337)
.++|+++|+++++|++|+.|.+. + +. +.+| .| |++. . +. .+.+... ....|+++.
T Consensus 159 ~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~--~~~p~~~g~~~~~~~~~gt~~~ 236 (379)
T TIGR03402 159 GEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGT--RFRPLLRGGHQERGRRAGTENV 236 (379)
T ss_pred HHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCC--CCCCcccCCccCCCcCCCCccH
Confidence 99999999999999999999776 1 22 2222 33 3332 2 21 1122111 123689999
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecCCCC--CeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTGGTD--VHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~~t~--~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
+.+.++..++.++. ...++..++..++.+++.+.|.+ .|+++.+.... ++++.+.+ .+.++.++...|++.||
T Consensus 237 ~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gI 313 (379)
T TIGR03402 237 PGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EYIEGEAILLLLDMEGI 313 (379)
T ss_pred HHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cCCCHHHHHHhhccCCE
Confidence 99999999998875 35567778888889999999875 58888753221 23444444 35578889999998999
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+..
T Consensus 314 ~v~~ 317 (379)
T TIGR03402 314 CASS 317 (379)
T ss_pred EEEc
Confidence 9874
No 56
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.49 E-value=4.5e-12 Score=125.02 Aligned_cols=247 Identities=11% Similarity=0.071 Sum_probs=158.6
Q ss_pred cceeee-ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chh
Q psy10669 31 NGIELI-ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPA 108 (337)
Q Consensus 31 ~~i~l~-asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~A 108 (337)
+.+.|- ++--.+|+.|.+++... ...|+.+..++++.+..... .++... +++ +++|+++. +|.|++| |.+
T Consensus 27 ~~iyld~~a~g~~p~~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~l~g~~~~----~v~~~~~~t~~ 98 (406)
T TIGR01814 27 AVIYLDGNSLGLMPKAARNALKEE-LDKWAKIAIRGHNTGKAPWF-TLDESL-LKL-RLVGAKED----EVVVMNTLTIN 98 (406)
T ss_pred CcEEecCCCcCcCcHHHHHHHHHH-HHHHHHhhhccCccCCCChh-hhhhhh-ccc-cccCCCCC----cEEEeCCchHH
Confidence 346665 55556799999999765 34554333333332112222 222222 234 89999863 5777777 556
Q ss_pred HHHHHHhhCCc------------------------------c------------------------c----ccccEEEEc
Q psy10669 109 NFAVCEKALPT------------------------------N------------------------N----ARFDFLSSG 130 (337)
Q Consensus 109 N~~v~~aLl~~------------------------------~------------------------~----a~pklII~~ 130 (337)
+..++.+++++ + + .++++|++.
T Consensus 99 l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~ 178 (406)
T TIGR01814 99 LHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLS 178 (406)
T ss_pred HHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEe
Confidence 55556776421 0 0 014677776
Q ss_pred Ccc--cccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeeeccC------Cch-hhh-hHHHHHhhccC
Q psy10669 131 TTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGVTKT------GEK-ILY-DYEEKINNAVF 191 (337)
Q Consensus 131 ~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T~~~------Gg~-i~~-~l~~~i~~~~~ 191 (337)
+.+ .+...|+++|.++|+++|++++||++|++|.+. + ++++.|| ||. ++. +....+.+...
T Consensus 179 ~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~~~~~~~p~~~ 258 (406)
T TIGR01814 179 GVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEKHAHTERPRLA 258 (406)
T ss_pred ccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCCeEEEEehhhhhhcCCCCC
Confidence 433 368999999999999999999999999999987 1 2333322 433 232 32222222100
Q ss_pred --------------------C--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEe
Q psy10669 192 --------------------P--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVV 244 (337)
Q Consensus 192 --------------------p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~ 244 (337)
| ...|||+.+.++++..++..+.+...+..++++.++++++.+.|.+. |++++
T Consensus 259 g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~ 338 (406)
T TIGR01814 259 GWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTII 338 (406)
T ss_pred cccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEe
Confidence 0 01488999999999999999876666788899999999999999873 58887
Q ss_pred cCCC---CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669 245 TGGT---DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAA 288 (337)
Q Consensus 245 ~~~t---~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~ 288 (337)
+... ..+++.+.+. .++.++.+.|.+.||.+.... .|||+.
T Consensus 339 ~~~~~~~r~~~v~~~~~---~~~~~~~~~L~~~gi~v~~~~~~~iRiS~ 384 (406)
T TIGR01814 339 TPRDHAQRGCQLSLTHP---VPGKAVFQALIKRGVIGDKREPSVIRVAP 384 (406)
T ss_pred CCCChhhcCCeEEEEec---CCHHHHHHHHHHCCEEEeccCCCeEEEec
Confidence 6311 1335555443 367888899998899986432 689886
No 57
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.47 E-value=1e-11 Score=121.55 Aligned_cols=237 Identities=12% Similarity=0.082 Sum_probs=153.6
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC 113 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~ 113 (337)
..++-..+|+.|++++...+.. +. .++++. |.......++...+++.+++++|++++ +|.+++| +.++..++
T Consensus 22 ~~~~~~~~p~~v~~a~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~~~~ 94 (397)
T TIGR01976 22 DNPAGTQIPQSVADAVSAALTR-SN-ANRGGA-YESSRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTFLLS 94 (397)
T ss_pred cCCccCCCCHHHHHHHHHHHHh-cC-CCCCCC-chHHHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHHHHH
Confidence 4466666799999999876543 22 233332 222222333444556789999999763 5777777 55654444
Q ss_pred Hhh---CCc-----------------------------------c---------c--c---cccEEEEc-Ccc-cccccC
Q psy10669 114 EKA---LPT-----------------------------------N---------N--A---RFDFLSSG-TTC-YSRCLD 139 (337)
Q Consensus 114 ~aL---l~~-----------------------------------~---------~--a---~pklII~~-~S~-~~~~~d 139 (337)
.++ +++ . + + ++++|++. .++ .+...|
T Consensus 95 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~ 174 (397)
T TIGR01976 95 RAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVD 174 (397)
T ss_pred HHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCC
Confidence 443 322 0 0 0 15777765 322 468889
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CCchhhh--hHHHHHhhccCC---------CC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TGEKILY--DYEEKINNAVFP---------SL 194 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p---------~~ 194 (337)
+++|.++|+++|+++++|++|..|... .++++. | ..|+++. ++.+.+.+...+ ..
T Consensus 175 ~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 254 (397)
T TIGR01976 175 LAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPHMGILWGRPELLMNLPPYKLTFSYDTGPERFE 254 (397)
T ss_pred HHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCceEEEEEcHHHHhhCCCccccCccCCCcchhc
Confidence 999999999999999999999887543 123333 2 3455543 455544432111 12
Q ss_pred CCCCcHHHHHHHHHHHHHHhchh--------------hHHHHHHHHHHHHHHHHHHHhCC-CEEecC---CCCCeEEEEE
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDE--------------FKSYQAQVKANASHLSDEMIKRG-YHVVTG---GTDVHLILID 256 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~--------------~~~y~~~v~~na~~l~~~L~~~G-~~v~~~---~t~~h~v~V~ 256 (337)
.||++.+.++++..++..+.+.+ .+..++++.+++++|.+.|.+.+ +++++. ...++++.+.
T Consensus 255 ~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 334 (397)
T TIGR01976 255 LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFT 334 (397)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEE
Confidence 58899999999999998875432 34556677778888888888864 888763 2356777666
Q ss_pred ecCCCcchHHHHHHHhhcCceecc
Q psy10669 257 LRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
+. +.++.++.++|++.||.+..
T Consensus 335 ~~--~~~~~~l~~~L~~~gI~v~~ 356 (397)
T TIGR01976 335 VH--GLPPQRVVRRLADQGIDAWA 356 (397)
T ss_pred eC--CcCHHHHHHHHHHCCeEEEe
Confidence 54 44678889999999999875
No 58
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.45 E-value=5.8e-12 Score=124.09 Aligned_cols=232 Identities=16% Similarity=0.120 Sum_probs=150.5
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE 114 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~ 114 (337)
.++.-.+++.|++++...+... .++++++.+.......+....+++.+++++|+++. .|.|++| |.++..++.
T Consensus 9 ~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~ 82 (402)
T TIGR02006 9 YAATTPVDPRVAEKMMPYLTEK--FGNPASRSHSFGWEAEEAVENARNQVAELIGADSR----EIVFTSGATESNNLAIK 82 (402)
T ss_pred CCcCCCCCHHHHHHHHHHHHhc--CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence 3455577999999998765444 36666554433333344555677899999999762 5777777 678766666
Q ss_pred hhC----Cc---------------------------------------------ccc--cccEEEEcCcc--cccccChH
Q psy10669 115 KAL----PT---------------------------------------------NNA--RFDFLSSGTTC--YSRCLDYA 141 (337)
Q Consensus 115 aLl----~~---------------------------------------------~~a--~pklII~~~S~--~~~~~d~~ 141 (337)
++. ++ +.. ++++|++.... .+...|++
T Consensus 83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~ 162 (402)
T TIGR02006 83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIA 162 (402)
T ss_pred HHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHH
Confidence 652 22 000 26777766333 46889999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc------e---ee-eecc----CC--chhhh-hHHHHHhhccCC------CCCCCC
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA------G---VK-GVTK----TG--EKILY-DYEEKINNAVFP------SLQGGP 198 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~------g---~~-~T~~----~G--g~i~~-~l~~~i~~~~~p------~~~g~~ 198 (337)
+|.++|+++|++++||++|++|.+. + ++ +.+| .| ++++. +....+.+.... ...||+
T Consensus 163 ~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~ 242 (402)
T TIGR02006 163 AIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTL 242 (402)
T ss_pred HHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCceecCCCccCCccCCCc
Confidence 9999999999999999999999876 1 22 2222 23 33333 222222322111 225899
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCC--CCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGG--TDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
+.+.++++..++..+. ...+...++..+..++|.+.|.+ .|+.+.+.. ...|+..+.+. +.++..+...|. +
T Consensus 243 ~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~--~~~~~~~~~~l~--~ 317 (402)
T TIGR02006 243 PTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN--YVEGESLIMALK--D 317 (402)
T ss_pred cHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe--CcCHHHHHHhcC--C
Confidence 9999999999998875 46677788888999999999887 577776521 12344455555 345566655553 5
Q ss_pred cee
Q psy10669 276 IAC 278 (337)
Q Consensus 276 I~v 278 (337)
|.+
T Consensus 318 i~v 320 (402)
T TIGR02006 318 LAV 320 (402)
T ss_pred EEE
Confidence 543
No 59
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.44 E-value=1.4e-11 Score=119.46 Aligned_cols=235 Identities=12% Similarity=0.109 Sum_probs=148.8
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc------chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN------QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN 109 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~------~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN 109 (337)
-+--++.|.+++++.. |+.|+.+++...|. ..+.+++ +.+++++|.+ ++.+++| +.++
T Consensus 8 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~------~i~~~~g~t~al 72 (361)
T cd06452 8 QRGGRLTPEARKALIE-----WGDGYSVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMD------EARVTPGAREGK 72 (361)
T ss_pred hcCCCCCHHHHHHHHH-----HhcccCCccccccccccccCchHHHHH----HHHHHHcCCc------eEEEeCCHHHHH
Confidence 3556788999998864 44555555543332 2234444 6889999995 3556565 6798
Q ss_pred HHHHHhhCCc--------------------------------c-------------cc--------cccEEEEcCcc--c
Q psy10669 110 FAVCEKALPT--------------------------------N-------------NA--------RFDFLSSGTTC--Y 134 (337)
Q Consensus 110 ~~v~~aLl~~--------------------------------~-------------~a--------~pklII~~~S~--~ 134 (337)
..++.+++++ . +. ++++|+++..+ +
T Consensus 73 ~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~t 152 (361)
T cd06452 73 FAVMHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNY 152 (361)
T ss_pred HHHHHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCC
Confidence 8888888654 0 01 24677776332 5
Q ss_pred ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c------CCchhhh--hHHHHHhhccCC----
Q psy10669 135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K------TGEKILY--DYEEKINNAVFP---- 192 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~------~Gg~i~~--~l~~~i~~~~~p---- 192 (337)
+...|+++|.++|+++|+++++|+||..|.+. .++++. | .+|+++. ++.+++.....|
T Consensus 153 G~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~ 232 (361)
T cd06452 153 GNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIK 232 (361)
T ss_pred eeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccc
Confidence 67889999999999999999999999988764 133333 3 2366654 465555432211
Q ss_pred ---CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecC-------C
Q psy10669 193 ---SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRK-------N 260 (337)
Q Consensus 193 ---~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~-------~ 260 (337)
...+++....++++..++.++. +.-+...+..+++++|++.|.+. |++++.. .+.+.++.++... .
T Consensus 233 ~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~ 310 (361)
T cd06452 233 EVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKH 310 (361)
T ss_pred eeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhc
Confidence 1234555556666666665543 22334455567889999999997 9999742 2455677666541 1
Q ss_pred CcchHHHHHHHhhcCceeccCc---ccchhh
Q psy10669 261 KLTGSKVELVLEEIAIACNKNT---GISLAA 288 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~~~---girig~ 288 (337)
...+.++.+.|.+.||.+..-. -+||++
T Consensus 311 ~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~ 341 (361)
T cd06452 311 KRRGYFLYSELKKRGIHGIKPGLTRYFKLST 341 (361)
T ss_pred cccchhHHHHHHHcCceEEcCCCceEEEEEe
Confidence 2234578888988899964211 456553
No 60
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.43 E-value=2e-11 Score=118.42 Aligned_cols=233 Identities=15% Similarity=0.172 Sum_probs=151.6
Q ss_pred CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC---
Q psy10669 41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--- 117 (337)
Q Consensus 41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl--- 117 (337)
...|.+.+++...+. .+ .|+++ .|.|. .+++..+++.+++++|++++ ..+.+.+|+.+|..++.++.
T Consensus 31 ~~~~~~~~a~~~~~~-~~-~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~---~~~~~~g~~~~~~~~~~~~~~~~ 100 (373)
T TIGR03812 31 NPHPIAVKAYDMFIE-TN-LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDA---YGYIVSGGTEANIQAVRAAKNLA 100 (373)
T ss_pred CchHHHHHHHHHHhh-cC-CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCC---CeEEeccHHHHHHHHHHHHHHHH
Confidence 467777787765432 22 35543 34553 34556667899999999763 12455666888876655542
Q ss_pred ---Cc---------------------------------------cc--c---cc-cEEEEcC-cccccccChHHHHHHhh
Q psy10669 118 ---PT---------------------------------------NN--A---RF-DFLSSGT-TCYSRCLDYARFRQICD 148 (337)
Q Consensus 118 ---~~---------------------------------------~~--a---~p-klII~~~-S~~~~~~d~~~l~eia~ 148 (337)
++ .+ + ++ .++++.+ +..+...|+++|.++|+
T Consensus 101 ~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~ 180 (373)
T TIGR03812 101 REEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIAL 180 (373)
T ss_pred hccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHH
Confidence 11 00 0 13 3444432 33568889999999999
Q ss_pred hcCCeEEEeccccccccc----------------ee---ee-ecc-------CCchhhh--hHHHHHhhccCCCC-----
Q psy10669 149 ETDSIMFADMSHISGLIA----------------GV---KG-VTK-------TGEKILY--DYEEKINNAVFPSL----- 194 (337)
Q Consensus 149 ~~ga~l~vD~AH~~Gli~----------------g~---~~-T~~-------~Gg~i~~--~l~~~i~~~~~p~~----- 194 (337)
++|++++||+||+.|.++ ++ ++ ++| .|++++. ++.+.++.. .|.+
T Consensus 181 ~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~ 259 (373)
T TIGR03812 181 ENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVD-APYLTVKKQ 259 (373)
T ss_pred HcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhccc-CcccCCCCC
Confidence 999999999999865431 11 11 222 1345543 455544321 2322
Q ss_pred ---CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 195 ---QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 195 ---~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
.|+++.+.++++..++..+.+..+++.++++.+++++|++.|++.|+..+.. ..++++.+.+. +..++.+.|
T Consensus 260 ~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~v~~~~~----~~~~v~~~L 334 (373)
T TIGR03812 260 ATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIE-PVLNIVAFEVD----DPEEVRKKL 334 (373)
T ss_pred cceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC-CCceEEEEEeC----CHHHHHHHH
Confidence 2577788899999998887656668889999999999999999999875432 45666665543 245788888
Q ss_pred hhcCceeccCc---ccchhhh
Q psy10669 272 EEIAIACNKNT---GISLAAE 289 (337)
Q Consensus 272 ~~~gI~v~~~~---girig~~ 289 (337)
.+.||.+.... .|||+..
T Consensus 335 ~~~gi~v~~~~~~~~iRis~~ 355 (373)
T TIGR03812 335 RDRGWYVSVTRCPKALRIVVM 355 (373)
T ss_pred HHCCceeccCCCCCEEEEEEE
Confidence 88899997643 6888654
No 61
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.43 E-value=3.4e-11 Score=118.81 Aligned_cols=243 Identities=11% Similarity=0.082 Sum_probs=166.7
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~ 111 (337)
.+.+.|---.+++.|++++...+.+ | | .....++-..++++++++||++..+ ..+...|||.++.+
T Consensus 10 ~~l~~pGP~~~~~~V~~a~~~~~~~-~-------~----~~~~~~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~ 75 (401)
T PLN02409 10 NHLFVPGPVNIPERVLRAMNRPNED-H-------R----SPAFPALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWES 75 (401)
T ss_pred ceeccCCCCCCCHHHHHHhcCCCCC-C-------C----CHHHHHHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHH
Confidence 3566777777899999999754221 1 1 1223445556778999999997421 34666677889888
Q ss_pred HHHhhCCc-------------------------------------------c--c-c----cccEEEEcCc--ccccccC
Q psy10669 112 VCEKALPT-------------------------------------------N--N-A----RFDFLSSGTT--CYSRCLD 139 (337)
Q Consensus 112 v~~aLl~~-------------------------------------------~--~-a----~pklII~~~S--~~~~~~d 139 (337)
++..++++ + + . ++|+|++.+. ..+...|
T Consensus 76 a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 76 ALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred HHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 88888654 0 0 1 3578888743 4579999
Q ss_pred hHHHHHH--hhhcCCeEEEeccccccccc------e---e-eeecc-----CC-chhhh--hHHHHHhhcc-CC---C--
Q psy10669 140 YARFRQI--CDETDSIMFADMSHISGLIA------G---V-KGVTK-----TG-EKILY--DYEEKINNAV-FP---S-- 193 (337)
Q Consensus 140 ~~~l~ei--a~~~ga~l~vD~AH~~Gli~------g---~-~~T~~-----~G-g~i~~--~l~~~i~~~~-~p---~-- 193 (337)
+++|.++ |+++|++++||++|++|.+. + + .+.+| .| |++.. ++.+++.+.- .| +
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWA 235 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHH
Confidence 9999999 99999999999999998886 1 2 23333 33 55543 4544443210 11 1
Q ss_pred ----------C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCC--C-eEEEEEecC
Q psy10669 194 ----------L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTD--V-HLILIDLRK 259 (337)
Q Consensus 194 ----------~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~--~-h~v~V~~~~ 259 (337)
. .+||+.+.+.++..++..+.+...+..+++..++++++.+.|.+.|+++++.... + .++.+.+ .
T Consensus 236 ~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~-p 314 (401)
T PLN02409 236 DYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVV-P 314 (401)
T ss_pred HHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeC-C
Confidence 1 3489999999999999998766678889999999999999999999998863111 2 2333333 3
Q ss_pred CCcchHHHHHHH-hhcCceeccC------cccchhhh
Q psy10669 260 NKLTGSKVELVL-EEIAIACNKN------TGISLAAE 289 (337)
Q Consensus 260 ~~~~~~~~~~~L-~~~gI~v~~~------~girig~~ 289 (337)
.++++.++.+.| +++||.+..- ..||||.-
T Consensus 315 ~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~ 351 (401)
T PLN02409 315 EGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHL 351 (401)
T ss_pred CCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCC
Confidence 466777776665 5689998732 27898743
No 62
>PRK15029 arginine decarboxylase; Provisional
Probab=99.42 E-value=4.2e-12 Score=132.99 Aligned_cols=202 Identities=13% Similarity=0.080 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------
Q psy10669 76 EIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------------- 119 (337)
Q Consensus 76 ~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------------- 119 (337)
.+...++++++++||++. .....+| |.+|.+++.+++++
T Consensus 205 G~I~eAq~~aA~~fgA~~-----t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~ 279 (755)
T PRK15029 205 GAFGESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRY 279 (755)
T ss_pred cHHHHHHHHHHHHhCCCc-----EEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccccccc
Confidence 345667889999999997 4555677 56799999999765
Q ss_pred ------------------cccc-c--c---------EEEEcCcccccccChHHHHHHhhhcCCeEEEeccccc-------
Q psy10669 120 ------------------NNAR-F--D---------FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS------- 162 (337)
Q Consensus 120 ------------------~~a~-p--k---------lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~------- 162 (337)
.+++ | | +|++.++.|+...|++.|.++|+++|.+|+||+||++
T Consensus 280 Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~ 359 (755)
T PRK15029 280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPI 359 (755)
T ss_pred CCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccccccCcc
Confidence 0001 2 2 5555588889999999999999999999999999976
Q ss_pred -----cc-------cc----eeeeeccC------Cchhhh--h---H-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh
Q psy10669 163 -----GL-------IA----GVKGVTKT------GEKILY--D---Y-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214 (337)
Q Consensus 163 -----Gl-------i~----g~~~T~~~------Gg~i~~--~---l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~ 214 (337)
.+ .+ .+.||||. ++++-. + + .++++.+..-..+++|+.+.+|++.+|..++.
T Consensus 360 ~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~ 439 (755)
T PRK15029 360 YADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMD 439 (755)
T ss_pred ccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh
Confidence 22 11 24588863 333321 2 1 24677665445578999999999999999885
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhC-C------------------------------------------CEEecC-----
Q psy10669 215 SDEFKSYQAQVKANASHLSDEMIKR-G------------------------------------------YHVVTG----- 246 (337)
Q Consensus 215 ~~~~~~y~~~v~~na~~l~~~L~~~-G------------------------------------------~~v~~~----- 246 (337)
.+.+++..++.++.+..|++.+.+. | +.+.+.
T Consensus 440 ~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (755)
T PRK15029 440 GNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWH 519 (755)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeeeccccccc
Confidence 4467888999999999999999763 3 233311
Q ss_pred ----------CCCCeEEEEEecCCCcchH---------HHHHHHhhcCceeccCc
Q psy10669 247 ----------GTDVHLILIDLRKNKLTGS---------KVELVLEEIAIACNKNT 282 (337)
Q Consensus 247 ----------~t~~h~v~V~~~~~~~~~~---------~~~~~L~~~gI~v~~~~ 282 (337)
..|.--+.|+++..+.+|. ++.++|+++||.+.+..
T Consensus 520 g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~ 574 (755)
T PRK15029 520 GFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT 574 (755)
T ss_pred CcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC
Confidence 1245567787767677777 89999999999999866
No 63
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.42 E-value=2.9e-11 Score=118.07 Aligned_cols=235 Identities=17% Similarity=0.152 Sum_probs=152.3
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
++...+++.|++++...+.+.| ++|++.+..+....+.++ .+++++++.+|+..+ -+|.+++| +.++..++.+
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~-~a~~~~~~~~~~~~~---~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIA-EALDKLYKGINARDL---DDIIITSCATESNNWVLKG 79 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHH-HHHHHHHHHcCcCCC---CeEEEeCCHHHHHHHHHHH
Confidence 4556779999999987655544 566654433433334454 345567778887322 26888777 5676655565
Q ss_pred hC-----Cc-------------------------------------------cc--c---cccEEEEcC-cc-cccccCh
Q psy10669 116 AL-----PT-------------------------------------------NN--A---RFDFLSSGT-TC-YSRCLDY 140 (337)
Q Consensus 116 Ll-----~~-------------------------------------------~~--a---~pklII~~~-S~-~~~~~d~ 140 (337)
+. ++ .+ + +++++++.. ++ .+...|+
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~ 159 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPI 159 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCH
Confidence 41 11 00 1 257777753 33 4688999
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eee-eecc----CC-chh-hh-hH--HHHHh--hccCCCCCCCCc
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVK-GVTK----TG-EKI-LY-DY--EEKIN--NAVFPSLQGGPH 199 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~-~T~~----~G-g~i-~~-~l--~~~i~--~~~~p~~~g~~~ 199 (337)
++|.++|+++|+++++|++|..|.+. .++ +.+| .| |++ +. ++ .+.+. ........|+++
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~ 239 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLFHGGEHMGGRRSGTLN 239 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcccCCCCCCCcccCCcC
Confidence 99999999999999999999999775 122 3333 33 333 22 22 11110 001112358999
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCC--CCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGT--DVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
.+.+++++.+++.+.+ ..+...+++.+..++|.+.|.+ .|++++++.. .++++.+.+ .++++..+...|++.||
T Consensus 240 ~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~~gI 316 (382)
T TIGR03403 240 VPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISI--KGVEGEAMLWDLNKAGI 316 (382)
T ss_pred hHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEe--CCCCHHHHHHhhccCCE
Confidence 9999999999987643 4566678888888899998877 6888886321 134555555 45678888888998999
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+..
T Consensus 317 ~v~~ 320 (382)
T TIGR03403 317 AAST 320 (382)
T ss_pred EEEc
Confidence 9984
No 64
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.41 E-value=6.7e-12 Score=119.81 Aligned_cols=234 Identities=15% Similarity=0.125 Sum_probs=138.4
Q ss_pred eccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669 36 IASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC 113 (337)
Q Consensus 36 ~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~ 113 (337)
++|||+. +|.|++++..... . . ..|.......+++ +.+++++| +. ..+.+.+|+.||..++
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~-~----~---~~~~~~~~~~~l~----~~~a~~~g-~~----~~~~~~~gt~a~~~~~ 64 (338)
T cd06502 2 FRSDTVTGPTPEMLEAMAAANV-G----D---DVYGEDPTTAKLE----ARAAELFG-KE----AALFVPSGTAANQLAL 64 (338)
T ss_pred cccccCCCCCHHHHHHHHhccc-C----C---cccCCCHHHHHHH----HHHHHHhC-CC----eEEEecCchHHHHHHH
Confidence 5799998 8999999975422 1 1 1222233445665 57789999 33 2577788899999988
Q ss_pred HhhCCc--------------------------------------------cc-c--------cccEEEEc-Cccccc---
Q psy10669 114 EKALPT--------------------------------------------NN-A--------RFDFLSSG-TTCYSR--- 136 (337)
Q Consensus 114 ~aLl~~--------------------------------------------~~-a--------~pklII~~-~S~~~~--- 136 (337)
.+++++ +. . +|++|++. +++.+.
T Consensus 65 ~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~ 144 (338)
T cd06502 65 AAHTQPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYP 144 (338)
T ss_pred HHhcCCCCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccC
Confidence 988654 00 0 25666665 433333
Q ss_pred ccChHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-----CCchhhh--hHHHHHhhccCCCC
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-----TGEKILY--DYEEKINNAVFPSL 194 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~ 194 (337)
..|+++|.++|+++|+++++|+||..+... .++.|. | .|++++. ++.+.+++...+ .
T Consensus 145 ~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~-~ 223 (338)
T cd06502 145 LDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQ-A 223 (338)
T ss_pred HHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHH-h
Confidence 234566778899999999999998543211 123333 2 2444443 566666543221 1
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh--
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE-- 272 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~-- 272 (337)
.++...+.+++.+ +...+....+.++.+++.+++++|.+.|.+.|+++.. +.+++++|.+.........+.+.+.
T Consensus 224 ~~~~~~~~~~~~a-~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~l~~~ 300 (338)
T cd06502 224 GGGMRQSGFLAAA-GLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNIVLLDPVEANAVFVELSKEAIER 300 (338)
T ss_pred CCChhhHHHHHHH-HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCeEEEecCCccHHHHHHHHHHHHh
Confidence 1233333332211 1222222346678899999999999999999986644 6777887776432212222222222
Q ss_pred -hcCceeccC--cccchhhhh
Q psy10669 273 -EIAIACNKN--TGISLAAEI 290 (337)
Q Consensus 273 -~~gI~v~~~--~girig~~~ 290 (337)
+.||.+... ..|||....
T Consensus 301 ~~~gi~~~~~~~~~lRi~~~~ 321 (338)
T cd06502 301 RGEGVLFYAWGEGGVRFVTHW 321 (338)
T ss_pred hhCCEEEEecCCCeEEEEeec
Confidence 458888654 267776543
No 65
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.40 E-value=9.5e-12 Score=123.01 Aligned_cols=229 Identities=15% Similarity=0.241 Sum_probs=152.7
Q ss_pred eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669 35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF 110 (337)
Q Consensus 35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~ 110 (337)
++.|+++. +..+-.||... .++.-..|.-.|.|.....++| ++++++||.++ .|..+||+.|..
T Consensus 33 ~l~~~~v~iDLltDsgT~aMs~~---q~a~~~~GDe~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ 100 (450)
T TIGR02618 33 LLNSEDVYIDLLTDSGTNAMSDK---QWAGLMMGDEAYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAEN 100 (450)
T ss_pred cCccCceEEEcccCCCcHHHHHH---HHHHhhhcchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHH
Confidence 45566554 44444444322 1222233445577888888999 57889999996 688899999933
Q ss_pred HHHHhhCCc-----------------------------c-------------------c--c-cc------cEEEEc--C
Q psy10669 111 AVCEKALPT-----------------------------N-------------------N--A-RF------DFLSSG--T 131 (337)
Q Consensus 111 ~v~~aLl~~-----------------------------~-------------------~--a-~p------klII~~--~ 131 (337)
.++...+++ . + + ++ ++|.+. .
T Consensus 101 ll~~l~l~pGDeVpsn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~ 180 (450)
T TIGR02618 101 LLSQIAIKPGDYVPGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTV 180 (450)
T ss_pred HHHHhCCCCcCEECCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEec
Confidence 344444443 0 0 0 11 122222 2
Q ss_pred ccc-ccc---cChHHHHHHhhhcCCeEEEecccccc--c-c-----c------------------eeee-ec-----cCC
Q psy10669 132 TCY-SRC---LDYARFRQICDETDSIMFADMSHISG--L-I-----A------------------GVKG-VT-----KTG 175 (337)
Q Consensus 132 S~~-~~~---~d~~~l~eia~~~ga~l~vD~AH~~G--l-i-----~------------------g~~~-T~-----~~G 175 (337)
-.+ +.+ -|+++++++|+++|+.|+.|+||..| . | + ++++ ++ +.|
T Consensus 181 N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G 260 (450)
T TIGR02618 181 NLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG 260 (450)
T ss_pred ccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc
Confidence 223 455 35778889999999999999999984 3 2 0 1233 33 249
Q ss_pred chhhh---hHHHHHhhc--cCCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669 176 EKILY---DYEEKINNA--VFPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT 248 (337)
Q Consensus 176 g~i~~---~l~~~i~~~--~~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t 248 (337)
|+++. ++.++++.. +++++ .|+..-..+.|+++++.|+.+ ..|.++.++++++|++.|.+.|+.|+. .+
T Consensus 261 G~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~-p~ 336 (450)
T TIGR02618 261 GFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVE-PV 336 (450)
T ss_pred eEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccC-CC
Confidence 99984 577766654 56665 455556689999999999864 388999999999999999999999974 47
Q ss_pred CCeEEEEEecC-------CCcchHHHHHHHh-hcCceec
Q psy10669 249 DVHLILIDLRK-------NKLTGSKVELVLE-EIAIACN 279 (337)
Q Consensus 249 ~~h~v~V~~~~-------~~~~~~~~~~~L~-~~gI~v~ 279 (337)
.+|++.||... ..+.+..+...|. +.||..-
T Consensus 337 ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~ 375 (450)
T TIGR02618 337 GGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSM 375 (450)
T ss_pred CcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEE
Confidence 88999999765 2445566666665 4677643
No 66
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.39 E-value=1.6e-11 Score=117.87 Aligned_cols=195 Identities=15% Similarity=0.115 Sum_probs=129.6
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-------------------------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT------------------------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~------------------------------- 119 (337)
....++| +.++++||.+. .+.++||+.|+..++.++ +++
T Consensus 18 ~~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (352)
T cd00616 18 PKVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDID 88 (352)
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecC
Confidence 3456676 57899999864 567788899988888888 333
Q ss_pred c---------cc-----cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-----------eeeeec--
Q psy10669 120 N---------NA-----RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-----------GVKGVT-- 172 (337)
Q Consensus 120 ~---------~a-----~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g~~~T~-- 172 (337)
. +. ++++|++.+ .++...|+++|.++|+++|+++++|++|+.|... .+.+.+
T Consensus 89 ~~~~~~d~~~l~~~i~~~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 167 (352)
T cd00616 89 PDTYNIDPELIEAAITPRTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPT 167 (352)
T ss_pred CCcCCcCHHHHHHhcCcCCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCC
Confidence 0 00 268888764 6788999999999999999999999999988543 112222
Q ss_pred c-----CCchhhh---hHHHHHhhccCCCCCC-------------CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669 173 K-----TGEKILY---DYEEKINNAVFPSLQG-------------GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231 (337)
Q Consensus 173 ~-----~Gg~i~~---~l~~~i~~~~~p~~~g-------------~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~ 231 (337)
| .||++++ ++.+++.....++... ....+..++++. ..+ ...+++.++..+|+++
T Consensus 168 K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~--~~l--~~~~~~~~~~~~~~~~ 243 (352)
T cd00616 168 KNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGL--AQL--EKLDEIIARRREIAER 243 (352)
T ss_pred CCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHH--HHH--HhhHHHHHHHHHHHHH
Confidence 2 3676654 4555444322211110 111122222222 222 2456788899999999
Q ss_pred HHHHHHh-CCCEEecCC----CCCeEEEEEecCC-CcchHHHHHHHhhcCceecc
Q psy10669 232 LSDEMIK-RGYHVVTGG----TDVHLILIDLRKN-KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 232 l~~~L~~-~G~~v~~~~----t~~h~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~ 280 (337)
+++.|.+ .|+++.... ...+++++.+... +.+..++.+.|.+.||.++.
T Consensus 244 ~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~ 298 (352)
T cd00616 244 YKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV 298 (352)
T ss_pred HHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee
Confidence 9999998 589887532 2346778777542 45788999999999997764
No 67
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.37 E-value=3.1e-10 Score=110.08 Aligned_cols=240 Identities=13% Similarity=0.084 Sum_probs=155.6
Q ss_pred eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCccee-ecCCCchhHHHH
Q psy10669 34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNV-QPYSGSPANFAV 112 (337)
Q Consensus 34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v-~~~Sgt~AN~~v 112 (337)
.+.|-=-.++|.|++++.... +. + ..++.+ +...+++.+++++|++... ..+ ...||+.++..+
T Consensus 8 ~~~pgP~~~~~~~~~a~~~~~------~~---~---~~~~~~-~~~~~~~~l~~l~~~~~~~--~~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 8 LLTPGPLTTSRTVREAMLRDW------GS---W---DDDFNA-LTASVRAKLVAIATGEEGY--TCVPLQGSGTFSVEAA 72 (368)
T ss_pred eecCCCCCCCHHHHHHhCCCC------CC---C---ChHHHH-HHHHHHHHHHHHhCCCCCc--eEEEEcCCcHHHHHHH
Confidence 355555666999999886532 11 1 122333 4445667999999986421 234 445678998888
Q ss_pred HHhhCCc-------------------------------------------cc--c-cc--cEEEEcCc--ccccccChHH
Q psy10669 113 CEKALPT-------------------------------------------NN--A-RF--DFLSSGTT--CYSRCLDYAR 142 (337)
Q Consensus 113 ~~aLl~~-------------------------------------------~~--a-~p--klII~~~S--~~~~~~d~~~ 142 (337)
+.++..+ +. . +| ++|.+... ..+...|+++
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~ 152 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDE 152 (368)
T ss_pred HHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHH
Confidence 8888643 00 0 13 44544432 3468899999
Q ss_pred HHHHhhhcCCeEEEeccccccccc---------e-eeeecc-----CC-chhhh--hHHHHHhhccCC------------
Q psy10669 143 FRQICDETDSIMFADMSHISGLIA---------G-VKGVTK-----TG-EKILY--DYEEKINNAVFP------------ 192 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~Gli~---------g-~~~T~~-----~G-g~i~~--~l~~~i~~~~~p------------ 192 (337)
|.++|+++|++++||++|..|... . +.+++| .| |+++. ++.+.+.....|
T Consensus 153 i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T PRK13479 153 IAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYM 232 (368)
T ss_pred HHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhh
Confidence 999999999999999999998754 1 233443 24 66543 454444332111
Q ss_pred ----CCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CCCe-EEEEEecC-CCcch
Q psy10669 193 ----SLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKRGYHVVTGG-TDVH-LILIDLRK-NKLTG 264 (337)
Q Consensus 193 ----~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t~~h-~v~V~~~~-~~~~~ 264 (337)
...-+++.+.++++..++..+.+.. .++..+++.++.++|.+.|.+.|++++... ..++ ++.+.+.. .+.+.
T Consensus 233 ~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (368)
T PRK13479 233 EKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDF 312 (368)
T ss_pred cccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCH
Confidence 1112788899999999998886543 477789999999999999999999886421 1222 23333322 22466
Q ss_pred HHHHHHHhhcCceeccCc-----ccchhh
Q psy10669 265 SKVELVLEEIAIACNKNT-----GISLAA 288 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~-----girig~ 288 (337)
.++.+.|.+.||.+.+.. .+|||.
T Consensus 313 ~~l~~~L~~~gi~v~~g~~~~~~~iRis~ 341 (368)
T PRK13479 313 KEFYERLKEQGFVIYPGKLTQVDTFRIGC 341 (368)
T ss_pred HHHHHHHHHCCEEEecCCCCCCCEEEEec
Confidence 788888988899996531 577764
No 68
>PRK02769 histidine decarboxylase; Provisional
Probab=99.37 E-value=1.6e-10 Score=113.46 Aligned_cols=243 Identities=14% Similarity=0.111 Sum_probs=153.5
Q ss_pred HHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCC-CcceeecCCC-chhHHHHHHhh---CCc
Q psy10669 45 AVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQ-WGCNVQPYSG-SPANFAVCEKA---LPT 119 (337)
Q Consensus 45 ~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~-~~~~v~~~Sg-t~AN~~v~~aL---l~~ 119 (337)
...+.+...+.+.+ |+|.+....| ....++|..+++.++++||+++.+ | ..++|| |.+|+..+.+- .+.
T Consensus 37 ~~~~~~~~~~~~n~--gnp~~~~~~g-~~~~~~e~~~~~~~a~l~g~~~~~~~---G~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 37 SALKRFFSFSINNC--GDPYSKSNYP-LNSFDFERDVMNFFAELFKIPFNESW---GYITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred HHHHHHHHhhhccC--CCccccCCCC-CChHHHHHHHHHHHHHHhCCCCCCCC---EEEecChHHHHHHHHHHHHHhCCC
Confidence 33444444444443 5665532222 234678888899999999997543 4 245555 88976443321 111
Q ss_pred --------------------------------------cc------c--cccEEEEcCcc--cccccChHHHHHHhhhcC
Q psy10669 120 --------------------------------------NN------A--RFDFLSSGTTC--YSRCLDYARFRQICDETD 151 (337)
Q Consensus 120 --------------------------------------~~------a--~pklII~~~S~--~~~~~d~~~l~eia~~~g 151 (337)
.+ . +|.+|+++..+ .+...|+++|.++|+++|
T Consensus 111 ~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g 190 (380)
T PRK02769 111 GTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIG 190 (380)
T ss_pred cEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence 00 0 16777776433 579999999999999998
Q ss_pred ---CeEEEeccccccccc------------e---e-eeecc-----CC-chhhh--hHHHHHhh------ccCCCCCCCC
Q psy10669 152 ---SIMFADMSHISGLIA------------G---V-KGVTK-----TG-EKILY--DYEEKINN------AVFPSLQGGP 198 (337)
Q Consensus 152 ---a~l~vD~AH~~Gli~------------g---~-~~T~~-----~G-g~i~~--~l~~~i~~------~~~p~~~g~~ 198 (337)
++++||+||+.|.+. + + .+.|| +| |+++. +..+.+.+ ..-+.+.||.
T Consensus 191 ~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR 270 (380)
T PRK02769 191 IDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSR 270 (380)
T ss_pred CCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCC
Confidence 699999999999884 1 1 22332 33 44432 23222211 1123457888
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
+...++++..+++.+....+++..++..+++++|.++|++.|+++.. +.....|.++... .++ ..+..+.+
T Consensus 271 ~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~---~p~~~~v~f~~~~---~~~---~~~w~l~~ 341 (380)
T PRK02769 271 NGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWR---NPNSITVVFPCPS---ERI---WKKWHLAT 341 (380)
T ss_pred CcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEc---CCCceEEEEcCCC---HHH---HhCeeEcc
Confidence 88899999999999887888999999999999999999999999985 3334445565433 222 23333333
Q ss_pred ccCcccch-hhhhHhhhCCCHHHHHHHH
Q psy10669 279 NKNTGISL-AAEIQAISGPKLVDFQTCL 305 (337)
Q Consensus 279 ~~~~giri-g~~~~t~~G~~~~~~~~~~ 305 (337)
.++ ++|| -|+.+|+.. +.+|.+++
T Consensus 342 ~~~-~~hi~~~~~~~~~~--~~~f~~dl 366 (380)
T PRK02769 342 SGN-QAHIITMPHHNKQQ--IDSLIDEL 366 (380)
T ss_pred cCC-EEEEEECCCCCHHH--HHHHHHHH
Confidence 332 7888 567777432 24455443
No 69
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.36 E-value=1.9e-10 Score=112.07 Aligned_cols=232 Identities=13% Similarity=0.048 Sum_probs=152.0
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec--CCCchhHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSGSPANFAV 112 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sgt~AN~~v 112 (337)
++|-=-.++|.|++++.... .+... ..+.+.+.. ++-..++++++++||++.+ | .|.| .|||.++.++
T Consensus 7 f~pGP~~~~~~v~~a~~~~~-----~~~~~-~~hr~~~f~-~~~~~~r~~l~~l~~~~~~-~--~v~f~~gs~T~a~~~~ 76 (361)
T TIGR01366 7 FGSGPSKVRLEQLQALTTTA-----ASLFG-TSHRQAPVK-NLVGRVREGLAELFSLPDG-Y--EVILGNGGATAFWDAA 76 (361)
T ss_pred ccCCCcCCCHHHHHHHHhcC-----ccccc-cCcCChHHH-HHHHHHHHHHHHHhCCCCC-c--eEEEECCchhHHHHHH
Confidence 44445567999999986320 01111 112233333 4445678899999998532 2 5665 3468887777
Q ss_pred HHhhCCc--------------------------------------ccc---cccEEEEcCc--ccccccChHHHHHHhhh
Q psy10669 113 CEKALPT--------------------------------------NNA---RFDFLSSGTT--CYSRCLDYARFRQICDE 149 (337)
Q Consensus 113 ~~aLl~~--------------------------------------~~a---~pklII~~~S--~~~~~~d~~~l~eia~~ 149 (337)
+.+++.+ +.. ++|+|.+++. +.++..|+++| +++
T Consensus 77 ~~~l~~~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~ 153 (361)
T TIGR01366 77 TFGLIEKKSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EGS 153 (361)
T ss_pred HHhcccccccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---ccc
Confidence 7887522 000 2688888744 35788887665 789
Q ss_pred cCCeEEEeccccccccc-------eeeeecc-----CCchhh---h-hHHHHHhhcc--------------------CCC
Q psy10669 150 TDSIMFADMSHISGLIA-------GVKGVTK-----TGEKIL---Y-DYEEKINNAV--------------------FPS 193 (337)
Q Consensus 150 ~ga~l~vD~AH~~Gli~-------g~~~T~~-----~Gg~i~---~-~l~~~i~~~~--------------------~p~ 193 (337)
+|++++||++|++|.+. .+.++.+ .||+.+ . ++.+++++.. -++
T Consensus 154 ~g~~~iVDavqs~g~~~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~ 233 (361)
T TIGR01366 154 DDALVVIDATSGAGGLPVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQ 233 (361)
T ss_pred CCCeEEEEcCccccCCCCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCC
Confidence 99999999999999988 2344432 244443 2 3333333110 024
Q ss_pred CCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-CEEec-CC-CCC-eEEEEEecCCCcchHHHH
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-YHVVT-GG-TDV-HLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~~v~~-~~-t~~-h~v~V~~~~~~~~~~~~~ 268 (337)
..+||+.+.+.++..+++++.+. ..+...++..+.++++.+.|.+.| ++++. +. ..+ .+..|.+. .+++..++.
T Consensus 234 t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~-~g~~~~~v~ 312 (361)
T TIGR01366 234 TYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV-DDIDAATVA 312 (361)
T ss_pred CCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC-CccCHHHHH
Confidence 46788888888999999999765 356777999999999999999987 56553 11 112 23456664 678999999
Q ss_pred HHHhhcCceecc
Q psy10669 269 LVLEEIAIACNK 280 (337)
Q Consensus 269 ~~L~~~gI~v~~ 280 (337)
..|++.||.+.+
T Consensus 313 ~~L~~~gI~i~~ 324 (361)
T TIGR01366 313 KILRANGIVDTE 324 (361)
T ss_pred HHHHHCCCeecc
Confidence 999988999864
No 70
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.36 E-value=8.1e-12 Score=118.15 Aligned_cols=156 Identities=19% Similarity=0.141 Sum_probs=112.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669 77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------ 119 (337)
Q Consensus 77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------ 119 (337)
+-..++++++++||+++ .+..++| |.+|.+++.+++++
T Consensus 60 ~i~~~~~~~A~~~ga~~-----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~ 134 (294)
T cd00615 60 PIKEAQELAARAFGAKH-----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYY 134 (294)
T ss_pred HHHHHHHHHHHHhCCCC-----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCccc
Confidence 34445578899999886 3443555 68899999998764
Q ss_pred -----------ccc-----cccEEEEc-CcccccccChHHHHHHhhhcCCeEEEecccccccc-----c----------e
Q psy10669 120 -----------NNA-----RFDFLSSG-TTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-----A----------G 167 (337)
Q Consensus 120 -----------~~a-----~pklII~~-~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-----~----------g 167 (337)
+.+ ++++|+++ ++.++...|+++|.++|+++|++++||+||.+++. . .
T Consensus 135 ~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div 214 (294)
T cd00615 135 GIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIV 214 (294)
T ss_pred CcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEE
Confidence 000 15766666 44457889999999999999999999999987431 1 1
Q ss_pred eeeeccC------Cchhhh--h--HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669 168 VKGVTKT------GEKILY--D--YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 168 ~~~T~~~------Gg~i~~--~--l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~ 237 (337)
+.+++|. ||++.. + ..+++.........++|+.+.++++..++.++. .+++++.++++++++++++.|.
T Consensus 215 ~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~-~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 215 VQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMA-LEGKELVEELIELALYARQEIN 293 (294)
T ss_pred EEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHh
Confidence 2344441 344433 2 134455554445578999999999999999884 4678899999999999999875
Q ss_pred h
Q psy10669 238 K 238 (337)
Q Consensus 238 ~ 238 (337)
+
T Consensus 294 ~ 294 (294)
T cd00615 294 K 294 (294)
T ss_pred C
Confidence 3
No 71
>PRK07505 hypothetical protein; Provisional
Probab=99.36 E-value=2.6e-10 Score=112.36 Aligned_cols=234 Identities=15% Similarity=0.122 Sum_probs=141.2
Q ss_pred ccceeeeccCCCC----CHHHHHHHhhhhhhccC-CCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669 30 INGIELIASENFT----SLAVLECLGSCLQNKYS-EGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~-~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S 104 (337)
.+...-++|.+|+ +|+|.+|+...+. +|+ .++.+++....++...++| ++++++++. . .+.++|
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~~l~----~~la~~~~~-~-----~~~~~s 113 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILKDLE----EALSELFGA-S-----VLTFTS 113 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHHHHH----HHHHHHhCC-C-----EEEECC
Confidence 3445555567888 9999999987654 554 2333333322334444555 688899987 3 588889
Q ss_pred CchhHHHHHHhhC----C--c------------------------------------ccc-----cccEEEEcCcccc--
Q psy10669 105 GSPANFAVCEKAL----P--T------------------------------------NNA-----RFDFLSSGTTCYS-- 135 (337)
Q Consensus 105 gt~AN~~v~~aLl----~--~------------------------------------~~a-----~pklII~~~S~~~-- 135 (337)
|+.||..++..+. + + .+. +++++|+.+.+++
T Consensus 114 G~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G 193 (402)
T PRK07505 114 CSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMG 193 (402)
T ss_pred hHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccC
Confidence 9999987764321 1 1 001 1466665544554
Q ss_pred cccChHHHHHHhhhcCCeEEEeccccccccc-----------e--------eeeec-c----CCchhhh---hHHHHHhh
Q psy10669 136 RCLDYARFRQICDETDSIMFADMSHISGLIA-----------G--------VKGVT-K----TGEKILY---DYEEKINN 188 (337)
Q Consensus 136 ~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g--------~~~T~-~----~Gg~i~~---~l~~~i~~ 188 (337)
...|.++|+++|+++|++|++|++|..|.++ + +++|. | .||+++. ++.+.+..
T Consensus 194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~ 273 (402)
T PRK07505 194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASGGVIMLGDAEQIELILR 273 (402)
T ss_pred CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccCeEEEeCCHHHHHHHHH
Confidence 6778899999999999999999999754332 1 11232 2 2577653 46666666
Q ss_pred ccCCCCCC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669 189 AVFPSLQG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV 267 (337)
Q Consensus 189 ~~~p~~~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~ 267 (337)
...|.+++ ++++..+++...++..+.+....+.++++.++.+.+.+.+... + .+....+.++.+... ....++
T Consensus 274 ~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~--~g~~~~i~~~~~~~~-~~~~~~ 347 (402)
T PRK07505 274 YAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE---Q--SGSFLPIRLIYIGDE-DTAIKA 347 (402)
T ss_pred hCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc---C--CCCCCCEEEEEeCCH-HHHHHH
Confidence 55565544 4556677776666554444445566677777766554433222 1 123344444444321 235667
Q ss_pred HHHHhhcCceecc
Q psy10669 268 ELVLEEIAIACNK 280 (337)
Q Consensus 268 ~~~L~~~gI~v~~ 280 (337)
.+.|.+.||.+..
T Consensus 348 ~~~l~~~Gi~v~~ 360 (402)
T PRK07505 348 AKQLLDRGFYTSP 360 (402)
T ss_pred HHHHHHCCCeEee
Confidence 7888888999975
No 72
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.36 E-value=8.3e-11 Score=125.65 Aligned_cols=240 Identities=14% Similarity=0.087 Sum_probs=153.6
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
|+-...+|.+.+.....+... ..++|++.+.. .....++.+.+|+++++|||++++++ .|.|++| |.|+..+..+
T Consensus 41 Aatt~~~~~~V~~~~~~~~~~-~~~np~s~~~~-s~~~~~~~e~aR~~ia~~lga~~~~~--~VvFtsnaT~alnlva~~ 116 (805)
T PLN02724 41 AGATLYSESQLEAALADFSSN-VYGNPHSQSDS-SMRSSDTIESARQQVLEYFNAPPSDY--ACVFTSGATAALKLVGET 116 (805)
T ss_pred CCCCCCCHHHHHHHHHHHHhh-ccCCCCcCcch-hhhHHHHHHHHHHHHHHHhCCCccce--EEEEeCChHHHHHHHHHH
Confidence 334454654444443333322 23677754333 34455555679999999999976422 5788887 6776565677
Q ss_pred h-CCc------------------ccc-------------------------------------------------cccEE
Q psy10669 116 A-LPT------------------NNA-------------------------------------------------RFDFL 127 (337)
Q Consensus 116 L-l~~------------------~~a-------------------------------------------------~pklI 127 (337)
+ +++ +++ +++||
T Consensus 117 l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LV 196 (805)
T PLN02724 117 FPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLF 196 (805)
T ss_pred CCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceE
Confidence 6 322 000 02577
Q ss_pred EEcC-cc-cccccChHHHHHHhhhc--------CCeEEEeccccccccc---------eeeeec------cCC-chh-hh
Q psy10669 128 SSGT-TC-YSRCLDYARFRQICDET--------DSIMFADMSHISGLIA---------GVKGVT------KTG-EKI-LY 180 (337)
Q Consensus 128 I~~~-S~-~~~~~d~~~l~eia~~~--------ga~l~vD~AH~~Gli~---------g~~~T~------~~G-g~i-~~ 180 (337)
++++ |+ .+...|++.+.++++.. +++++||+||++|.+. .+++++ |+| |++ +.
T Consensus 197 a~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr 276 (805)
T PLN02724 197 AFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGLGALLVR 276 (805)
T ss_pred EEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCCceEEEEe
Confidence 7773 33 36999998876666542 3689999999999998 234443 333 433 33
Q ss_pred -hHHHHHhhccCCC-----------------------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q psy10669 181 -DYEEKINNAVFPS-----------------------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEM 236 (337)
Q Consensus 181 -~l~~~i~~~~~p~-----------------------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L 236 (337)
++.+.+.+..+.+ -.||++.+.++++..|+.++.+...+...+++.+++++|.+.|
T Consensus 277 ~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L 356 (805)
T PLN02724 277 RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSL 356 (805)
T ss_pred hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 4544444432221 1589999999999999999876667888999999999999999
Q ss_pred HhC-------CCEEecCC-----CCCeEEEEEecCCCc-----chHHHHHHHhhcCceecc
Q psy10669 237 IKR-------GYHVVTGG-----TDVHLILIDLRKNKL-----TGSKVELVLEEIAIACNK 280 (337)
Q Consensus 237 ~~~-------G~~v~~~~-----t~~h~v~V~~~~~~~-----~~~~~~~~L~~~gI~v~~ 280 (337)
.+. ++++++.. ...+..+|.++-.+. ...++...++++||.++.
T Consensus 357 ~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~ 417 (805)
T PLN02724 357 RNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRT 417 (805)
T ss_pred HhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEee
Confidence 985 47777532 123444555544443 345677777888998875
No 73
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.33 E-value=3.8e-11 Score=124.87 Aligned_cols=199 Identities=17% Similarity=0.111 Sum_probs=147.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669 77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------ 119 (337)
Q Consensus 77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------ 119 (337)
.-..+++.+|++||++. ....+.| |.+|.+++.+++++
T Consensus 196 ~i~eAe~~AA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~G 270 (714)
T PRK15400 196 PHKEAEEYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYG 270 (714)
T ss_pred HHHHHHHHHHHHhCCCc-----EEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccC
Confidence 44567889999999997 3455677 57899999999765
Q ss_pred -----------------ccc-----c-c-cEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccc--cc---cc----
Q psy10669 120 -----------------NNA-----R-F-DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS--GL---IA---- 166 (337)
Q Consensus 120 -----------------~~a-----~-p-klII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~--Gl---i~---- 166 (337)
+++ + | .+||+.++.++...|++.|.++|+.++ ++||+||++ ++ +.
T Consensus 271 i~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sa 348 (714)
T PRK15400 271 ILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCG 348 (714)
T ss_pred CccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcCh
Confidence 011 1 3 256666778899999999999999876 799999986 11 11
Q ss_pred ------------eeeeeccC-Cchhhh-------hH-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669 167 ------------GVKGVTKT-GEKILY-------DY-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225 (337)
Q Consensus 167 ------------g~~~T~~~-Gg~i~~-------~l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v 225 (337)
.+.||||. +||.-+ ++ .++++.+..=..+++|+.+.+|++.++...|..+.+++..+..
T Consensus 349 m~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~ 428 (714)
T PRK15400 349 MSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGS 428 (714)
T ss_pred hhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 13578774 233321 22 3567776544557899999999999999988655788999999
Q ss_pred HHHHHHHHHHHHhC-C------CEEecC----------------------------CCCCeEEEEEecC---------CC
Q psy10669 226 KANASHLSDEMIKR-G------YHVVTG----------------------------GTDVHLILIDLRK---------NK 261 (337)
Q Consensus 226 ~~na~~l~~~L~~~-G------~~v~~~----------------------------~t~~h~v~V~~~~---------~~ 261 (337)
++.+..|++.|.+. + |++... ..|.--+.|.+.. .|
T Consensus 429 i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~G 508 (714)
T PRK15400 429 IERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFG 508 (714)
T ss_pred HHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccccC
Confidence 99999999999873 4 555420 0255566677654 67
Q ss_pred cchHHHHHHHhhcCceeccCc
Q psy10669 262 LTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 262 ~~~~~~~~~L~~~gI~v~~~~ 282 (337)
+.+..+++.|+++||.+.+..
T Consensus 509 ipg~~v~~~L~e~gI~~E~~d 529 (714)
T PRK15400 509 IPASIVAKYLDEHGIVVEKTG 529 (714)
T ss_pred CCHHHHHHHHHHcCCEEEecC
Confidence 889999999999999999876
No 74
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.33 E-value=3.3e-10 Score=110.44 Aligned_cols=227 Identities=16% Similarity=0.105 Sum_probs=145.5
Q ss_pred CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc
Q psy10669 40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT 119 (337)
Q Consensus 40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~ 119 (337)
+++|++|++++..... .| + + .+++...++++++++||.++ .+...++|.|+..++.+++++
T Consensus 23 s~~~~~v~~a~~~~~~-~~---------~-~---~~~~~~~~~~~~a~~~g~~~-----~~~~~g~t~al~~al~al~~~ 83 (363)
T TIGR01437 23 STVSDEVADAQKRGAQ-NY---------F-E---IKELVNKTGEYIANLLGVED-----AVIVSSASAGIAQSVAAVITR 83 (363)
T ss_pred CCCCHHHHHHHHHHHh-cC---------C-C---HHHHHHHHHHHHHHhhCCCe-----EEEEcCHHHHHHHHHHHHhcC
Confidence 4579999999986532 23 1 1 34455556678999999875 355566688988777876410
Q ss_pred ----------------------------------------------------------ccc---cccEEEE--cCcc-cc
Q psy10669 120 ----------------------------------------------------------NNA---RFDFLSS--GTTC-YS 135 (337)
Q Consensus 120 ----------------------------------------------------------~~a---~pklII~--~~S~-~~ 135 (337)
+.+ ++++|+. .+++ ++
T Consensus 84 Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g 163 (363)
T TIGR01437 84 GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQK 163 (363)
T ss_pred CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcC
Confidence 111 2576553 2333 46
Q ss_pred cccChHHHHHHhhhcCCeEEEecccccccc-----c--eeeeec------cCCchhhh--hHHHHHhhccCC---CC-CC
Q psy10669 136 RCLDYARFRQICDETDSIMFADMSHISGLI-----A--GVKGVT------KTGEKILY--DYEEKINNAVFP---SL-QG 196 (337)
Q Consensus 136 ~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-----~--g~~~T~------~~Gg~i~~--~l~~~i~~~~~p---~~-~g 196 (337)
...|+++|.++|+++|+++++|+||...+- + .+++++ +++|+++. ++.+.+...... .+ .+
T Consensus 164 ~~~~~~~i~~~a~~~gi~vivD~a~~~~~~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~ 243 (363)
T TIGR01437 164 SMLSVEDAAQVAQEHNLPLIVDAAAEEDLQKYYRLGADLVIYSGAKAIEGPTSGLVLGKKKYIEWVKLQSKGIGRAMKVG 243 (363)
T ss_pred CcCCHHHHHHHHHHcCCeEEEECCCCCchHHHHHcCCCEEEEeCCcccCCCceEEEEEcHHHHHHHHhccCCCcceeccC
Confidence 789999999999999999999999984331 1 233333 34677764 454444321111 11 22
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec--CC----CCCeEEEEEecCCCcchHHHHH
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT--GG----TDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~--~~----t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
+ ..++|+..++.++.. ...+..++..+++++++++|.+ .|+++.. +. .+...+.++....++++.++.+
T Consensus 244 ~---~~~~gl~aAl~~~~~-~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~ 319 (363)
T TIGR01437 244 K---ENILGLTAALEQYLS-TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQ 319 (363)
T ss_pred H---HHHHHHHHHHHHHHc-cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHH
Confidence 2 448899999988863 4455566666788899999998 5998873 11 1234444444446789999999
Q ss_pred HHhhcC--ceecc----Ccccchhhh
Q psy10669 270 VLEEIA--IACNK----NTGISLAAE 289 (337)
Q Consensus 270 ~L~~~g--I~v~~----~~girig~~ 289 (337)
+|.+.| |.++. ...+||...
T Consensus 320 ~L~~~~~~I~~r~~~~~~~~~~l~~~ 345 (363)
T TIGR01437 320 ALRQGEPAIYTRGYKANEGIIEIDPR 345 (363)
T ss_pred HHhcCCCCEEEeeeeecCCeEEEEee
Confidence 998655 77764 225555443
No 75
>KOG1549|consensus
Probab=99.32 E-value=6.6e-11 Score=115.17 Aligned_cols=194 Identities=17% Similarity=0.130 Sum_probs=129.8
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE 114 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~ 114 (337)
..+--.++|.|.+||...+.+- .|+|.++ +-|.+.-+.+| .+|+.+|+++|+++. +|.|+|| |.+|..++.
T Consensus 49 ~~at~p~~~~Vldam~~~~~~~--~~nPh~~-~y~w~~~~~~E-~aR~~VAklInAd~~----dIiFts~ATEs~Nlvl~ 120 (428)
T KOG1549|consen 49 NQATGPMDPRVLDAMLPYLLEY--LGNPHSR-SYGWKAEDAVE-AAREQVAKLINADPS----DIVFTSGATESNNLVLK 120 (428)
T ss_pred cCcCCCCCHHHHHHHHHHHHHh--hcCCCcc-ccchhhhHHHH-HHHHHHHHHhCCCCC----cEEEeCCchHHHHHHHH
Confidence 4455667999999998765543 4899999 33444444555 689999999999994 7999999 788777788
Q ss_pred hhCC--------c-----------------------------------------ccc---cccEEEEcCccc--ccccCh
Q psy10669 115 KALP--------T-----------------------------------------NNA---RFDFLSSGTTCY--SRCLDY 140 (337)
Q Consensus 115 aLl~--------~-----------------------------------------~~a---~pklII~~~S~~--~~~~d~ 140 (337)
++.. . +.+ +++++.+..-++ +-..|+
T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv 200 (428)
T KOG1549|consen 121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPV 200 (428)
T ss_pred HhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccH
Confidence 8732 0 111 278998874332 578899
Q ss_pred HHHHHHhhhcCCeEEEeccccccccce---------eeeecc-----CC--chhhhhHHHHHh--hccCC------CCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIAG---------VKGVTK-----TG--EKILYDYEEKIN--NAVFP------SLQG 196 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~g---------~~~T~~-----~G--g~i~~~l~~~i~--~~~~p------~~~g 196 (337)
++|..||++.|..+++|+||..|.+.. +++..| +| .+++....+.+. +-+.. .-.|
T Consensus 201 ~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsG 280 (428)
T KOG1549|consen 201 KEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKRPRLRVEPPLSGGGQERGLRSG 280 (428)
T ss_pred HHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccCCCcccccCcccCCccccccccC
Confidence 999999999999999999999999992 222222 33 333322111111 21122 2258
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
|...+.+.++..|++.+. .++.-+-..+.++...|...+..
T Consensus 281 T~~~~~~~~~gsA~e~~~-~~~~~~~~~~~~~~~~ll~~i~~ 321 (428)
T KOG1549|consen 281 TVATPLAVGLGSAAEFVN-KEMAYDEAIIKRLSEKLLMGIGQ 321 (428)
T ss_pred CcCchhhhhhHHHHHHHH-hhcchhHHHHHHHHHHHHHHHhh
Confidence 889999999999887764 33333333444455555555544
No 76
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.32 E-value=4.9e-10 Score=107.44 Aligned_cols=237 Identities=14% Similarity=0.112 Sum_probs=153.3
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceee-cCCCchhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQ-PYSGSPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~-~~Sgt~AN~~v~~a 115 (337)
|---.++|.|++++...+.. | ...+ .++-...++.+++++|+++.. ..+. ..||+.++..++.+
T Consensus 5 p~p~~~~~~~~~~~~~~~~~---------~---~~~~-~~~~~~~~~~la~~~~~~~~~--~~i~~~~~gt~~l~~~~~~ 69 (355)
T TIGR03301 5 PGPLSTSATVRDAMLVDWCH---------W---DSEF-NDVTDQVRDRLLALAGGDDNH--TCVLLQGSGTFAVEATIGS 69 (355)
T ss_pred CCCCCCCHHHHHHhhhhccC---------C---CHHH-HHHHHHHHHHHHHHhcCCCCC--cEEEEeCCcHHHHHHHHHh
Confidence 33445689999998752111 1 1111 233334557999999998631 1344 45778999888888
Q ss_pred hCCc-------------------------------------------ccc---cc--cEEEEc--CcccccccChHHHHH
Q psy10669 116 ALPT-------------------------------------------NNA---RF--DFLSSG--TTCYSRCLDYARFRQ 145 (337)
Q Consensus 116 Ll~~-------------------------------------------~~a---~p--klII~~--~S~~~~~~d~~~l~e 145 (337)
++++ +.+ +| ++|+.. ++..+...|+++|.+
T Consensus 70 ~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~ 149 (355)
T TIGR03301 70 LVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAK 149 (355)
T ss_pred ccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHH
Confidence 8643 000 13 344443 344578889999999
Q ss_pred HhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhccCC---------------
Q psy10669 146 ICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNAVFP--------------- 192 (337)
Q Consensus 146 ia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~~~p--------------- 192 (337)
+|+++|+++++|++|+.|.+. .++++ +| .| |+++. ++.+.+.....|
T Consensus 150 l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (355)
T TIGR03301 150 VARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKT 229 (355)
T ss_pred HHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhc
Confidence 999999999999999998765 12233 33 23 45543 444443311111
Q ss_pred -CCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCe-EEEEEecC-CCcchHHH
Q psy10669 193 -SLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVH-LILIDLRK-NKLTGSKV 267 (337)
Q Consensus 193 -~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h-~v~V~~~~-~~~~~~~~ 267 (337)
....+++.+.++++..++..+.+.. +++..++..++.+++.+.|.+.|+++... ...+. ++++.+.. ...+..++
T Consensus 230 ~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T TIGR03301 230 GKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDF 309 (355)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHH
Confidence 1234788889999999998886544 67888899999999999999999987642 12233 34455443 12456688
Q ss_pred HHHHhhcCceeccCc-----ccchhh
Q psy10669 268 ELVLEEIAIACNKNT-----GISLAA 288 (337)
Q Consensus 268 ~~~L~~~gI~v~~~~-----girig~ 288 (337)
.+.|.+.||.+.+-. .|||+.
T Consensus 310 ~~~l~~~gi~i~~~~~~~~~~iRis~ 335 (355)
T TIGR03301 310 YQELKERGFVIYPGKLTLADTFRIGT 335 (355)
T ss_pred HHHHHHCCEEEECCccccccEEEEec
Confidence 899998999986542 678764
No 77
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.31 E-value=5.6e-11 Score=123.57 Aligned_cols=198 Identities=17% Similarity=0.133 Sum_probs=144.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669 77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------ 119 (337)
Q Consensus 77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------ 119 (337)
.-..+++.+|++||++. ....++| |.+|.+++.+++++
T Consensus 196 ~i~eAe~~aA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~G 270 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQ-----SYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALG 270 (713)
T ss_pred HHHHHHHHHHHHhCCCc-----EEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccC
Confidence 34567889999999997 3555677 56899999999765
Q ss_pred -----------------cc-----c-cccEEEEc-CcccccccChHHHHHHhhhcCCeE-EEeccccc--cccc------
Q psy10669 120 -----------------NN-----A-RFDFLSSG-TTCYSRCLDYARFRQICDETDSIM-FADMSHIS--GLIA------ 166 (337)
Q Consensus 120 -----------------~~-----a-~pklII~~-~S~~~~~~d~~~l~eia~~~ga~l-~vD~AH~~--Gli~------ 166 (337)
.+ + +|+.+|++ ++.++...|++.|.++| |+.+ +||+||++ ++..
T Consensus 271 i~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~s 347 (713)
T PRK15399 271 ILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKS 347 (713)
T ss_pred CcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcC
Confidence 00 1 24555554 77789999999998888 5666 69999985 1111
Q ss_pred ----------e---eeeeccC------Cchhhh--hH-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHH
Q psy10669 167 ----------G---VKGVTKT------GEKILY--DY-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQ 224 (337)
Q Consensus 167 ----------g---~~~T~~~------Gg~i~~--~l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~ 224 (337)
+ +.||||. +.+|-. ++ .++++.+..-..+++|+.+.+|++.++...|..+.+++..+.
T Consensus 348 am~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~ 427 (713)
T PRK15399 348 GMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINR 427 (713)
T ss_pred hhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 2 4688874 333311 22 356777655455789999999999999999865578899999
Q ss_pred HHHHHHHHHHHHHhCC-------CEEecC----------------------------CCCCeEEEEEec---------CC
Q psy10669 225 VKANASHLSDEMIKRG-------YHVVTG----------------------------GTDVHLILIDLR---------KN 260 (337)
Q Consensus 225 v~~na~~l~~~L~~~G-------~~v~~~----------------------------~t~~h~v~V~~~---------~~ 260 (337)
.++.+..+++.|.+.+ |++... ..|.--+.|.+. ..
T Consensus 428 ~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~ 507 (713)
T PRK15399 428 SVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEE 507 (713)
T ss_pred HHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccC
Confidence 9999999999998743 455420 125555667665 45
Q ss_pred CcchHHHHHHHhhcCceeccCc
Q psy10669 261 KLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
|++|..+.+.|+++||.+.+..
T Consensus 508 Gi~g~~l~~~L~e~gI~~E~~d 529 (713)
T PRK15399 508 GIPAALVAKFLDERGIVVEKTG 529 (713)
T ss_pred CCCHHHHHHHHHHcCCEEEecC
Confidence 8899999999999999999866
No 78
>KOG1358|consensus
Probab=99.28 E-value=5.4e-11 Score=113.55 Aligned_cols=257 Identities=15% Similarity=0.149 Sum_probs=175.5
Q ss_pred hcccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHH-HHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669 28 RQINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFID-EIEIVAQQRSLKAFNLDPEQWGCNVQP 102 (337)
Q Consensus 28 rq~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~-~lE~~~~~~~a~lfg~~~~~~~~~v~~ 102 (337)
-.++.+..+||.||+ ++.+.+..... ..+|+.|..|.|.+=|+.+.+ .+| +++++|+|++. .+.+
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~-lrkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~-----aivY 160 (467)
T KOG1358|consen 91 IDGKDVLNFASANFLGLIENEEIKEEASFT-LRKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTED-----AIVY 160 (467)
T ss_pred ecCceeecccchhhhhhcccHHHHHHHHHH-HHHhCCCCcCCCcccccceeecccH----HHHHHhhCCcc-----eeee
Confidence 345567779999999 88998888765 568999999999888997774 898 58899999997 5888
Q ss_pred CCCchhHHHHHHhhCCc-----------------------------------------cc----------ccc-cEEEEc
Q psy10669 103 YSGSPANFAVCEKALPT-----------------------------------------NN----------ARF-DFLSSG 130 (337)
Q Consensus 103 ~Sgt~AN~~v~~aLl~~-----------------------------------------~~----------a~p-klII~~ 130 (337)
.-|+.+...++.|+++. +. +.+ +.||+
T Consensus 161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~- 239 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVV- 239 (467)
T ss_pred ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEE-
Confidence 88888777677888654 11 112 34555
Q ss_pred Cccc---ccccChHHHHHHhhhcCCeEEEeccccccccc----ee--------------eeec-----cCCchhhhh---
Q psy10669 131 TTCY---SRCLDYARFRQICDETDSIMFADMSHISGLIA----GV--------------KGVT-----KTGEKILYD--- 181 (337)
Q Consensus 131 ~S~~---~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g~--------------~~T~-----~~Gg~i~~~--- 181 (337)
+..| +...|..+|-+++.||...+++|++.+.|+++ |+ ++.+ ..|||..++
T Consensus 240 EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i 319 (467)
T KOG1358|consen 240 EGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFI 319 (467)
T ss_pred EeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccCceeecceee
Confidence 4555 56666667778889999999999999999999 22 1111 247777662
Q ss_pred -HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecC
Q psy10669 182 -YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 182 -l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~ 259 (337)
..+++... .+.+|...+|.+++.+.....+++ .-++..+.+.+.+..+.+.|... |+.+. +...++++-+-+..
T Consensus 320 ~~hQrLSg~--~Y~fSAslPp~la~aa~~ai~i~~-~~p~~~~~L~~k~~~~H~~l~~~s~~~v~-~~~~SPi~hl~l~~ 395 (467)
T KOG1358|consen 320 ADHQRLSGS--GYCFSASLPPYLAGAAIKAILIEE-WNPEIVQPLRAKVAKFHAALSSNSGFIVS-GSPESPIIHLQLER 395 (467)
T ss_pred Eeeeecccc--ceeeeccCchhhhhhHHHHHHHHh-hCcchhhhhhccccccchhhhcCCceEEe-cCcCCceeeeeecc
Confidence 22344432 344677888888877776666543 33567888888888888888874 56665 56788888887766
Q ss_pred CCcchHHHHHHHhh-------cCceeccCc------------ccchhhhhHhhhCCCHHHHHH
Q psy10669 260 NKLTGSKVELVLEE-------IAIACNKNT------------GISLAAEIQAISGPKLVDFQT 303 (337)
Q Consensus 260 ~~~~~~~~~~~L~~-------~gI~v~~~~------------girig~~~~t~~G~~~~~~~~ 303 (337)
...+..+=.+.|++ .|+.+-.+. +|||. -+.|+...|+.+
T Consensus 396 ~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~----~~a~~seeel~r 454 (467)
T KOG1358|consen 396 SYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRIC----VSAGMSEEELER 454 (467)
T ss_pred cccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEE----EeCCCCHHHHHH
Confidence 43333333333332 155544333 66664 345666666554
No 79
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.27 E-value=1.8e-10 Score=119.86 Aligned_cols=198 Identities=17% Similarity=0.116 Sum_probs=143.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669 77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------ 119 (337)
Q Consensus 77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------ 119 (337)
.-..+++.+|++||++.+ .....| |.+|.+++.|++++
T Consensus 175 ~i~eAq~~AA~~fgAd~t-----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 175 AAKDAQKHAAKVFNADKT-----YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPF 249 (720)
T ss_pred HHHHHHHHHHHHhCCCce-----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccccc
Confidence 345678899999999973 445577 56899999988765
Q ss_pred ---------c----------------cc---cc-cEEEEc-CcccccccChHHHHHH-hhhcCCeEEEeccccccc--cc
Q psy10669 120 ---------N----------------NA---RF-DFLSSG-TTCYSRCLDYARFRQI-CDETDSIMFADMSHISGL--IA 166 (337)
Q Consensus 120 ---------~----------------~a---~p-klII~~-~S~~~~~~d~~~l~ei-a~~~ga~l~vD~AH~~Gl--i~ 166 (337)
+ .+ +| |++|++ ++.++...|++.|.++ +++++ +|+||+||++=+ ..
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p 328 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIP 328 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhhccCc
Confidence 0 00 13 655554 7778999999999998 78888 999999998611 11
Q ss_pred --------------------eeeeeccC------Cchhhh-h--H--------HHHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669 167 --------------------GVKGVTKT------GEKILY-D--Y--------EEKINNAVFPSLQGGPHNHAIGAIATA 209 (337)
Q Consensus 167 --------------------g~~~T~~~------Gg~i~~-~--l--------~~~i~~~~~p~~~g~~~~~~iaala~a 209 (337)
.+.||||. +.+|-. + + .++++.+..=..+++|+.+.+|++.++
T Consensus 329 ~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva 408 (720)
T PRK13578 329 MMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVN 408 (720)
T ss_pred ccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 14678874 333321 1 1 257777755455789999999999999
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHH-Hh-CCCEEec---------------------------------C--------
Q psy10669 210 MLQAQSDEFKSYQAQVKANASHLSDEM-IK-RGYHVVT---------------------------------G-------- 246 (337)
Q Consensus 210 ~~e~~~~~~~~y~~~v~~na~~l~~~L-~~-~G~~v~~---------------------------------~-------- 246 (337)
...+..+.+++..+..++.+..+++.| .. .+|++.. |
T Consensus 409 ~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~ 488 (720)
T PRK13578 409 AKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQ 488 (720)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccccccccc
Confidence 988865678899999999999999999 33 5777661 0
Q ss_pred -CCCCeEEEEEecCCCcc------------hHHHHHHHhhcCceeccCc
Q psy10669 247 -GTDVHLILIDLRKNKLT------------GSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 247 -~t~~h~v~V~~~~~~~~------------~~~~~~~L~~~gI~v~~~~ 282 (337)
..|.--+.|.+ .|++ |.++.+.|.+.||.+.+..
T Consensus 489 ~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d 535 (720)
T PRK13578 489 YFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD 535 (720)
T ss_pred cccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC
Confidence 01444455554 3444 7999999977799999876
No 80
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.23 E-value=2.4e-09 Score=104.14 Aligned_cols=241 Identities=13% Similarity=0.073 Sum_probs=170.5
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~ 111 (337)
.+.|.|-=--++|.|++||.....+- | ......+-..+.+.++.+|+.+.. | +-+...|||.+.-+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h--------~----s~~F~~~~~~~~~~L~~v~~t~~~-~-~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGH--------R----SPDFVGIMKEVLEKLRKVFGTENG-D-VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCC--------C----CHHHHHHHHHHHHHHHHHhcCCCC-c-EEEEcCCcHHHHHH
Confidence 46777887888999999998643321 1 112233444556799999998831 2 45666888999999
Q ss_pred HHHhhCCc---------------------------------------------cccc---ccEEEEc--CcccccccChH
Q psy10669 112 VCEKALPT---------------------------------------------NNAR---FDFLSSG--TTCYSRCLDYA 141 (337)
Q Consensus 112 v~~aLl~~---------------------------------------------~~a~---pklII~~--~S~~~~~~d~~ 141 (337)
.+..+++| .+.+ .++|.+. +++-++.-|++
T Consensus 72 av~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~ 151 (383)
T COG0075 72 AVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLK 151 (383)
T ss_pred HHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHH
Confidence 99999875 1111 3555554 66778888999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc------e----eeeec-----cCC-chh-------------------hh--hHHH
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA------G----VKGVT-----KTG-EKI-------------------LY--DYEE 184 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~------g----~~~T~-----~~G-g~i-------------------~~--~l~~ 184 (337)
+|.++|+++|++++||+=-+.|-.. | ++++. |-| |++ +. ++.+
T Consensus 152 ~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~ 231 (383)
T COG0075 152 EIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLK 231 (383)
T ss_pred HHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHH
Confidence 9999999999999999987877776 1 22221 122 222 11 2333
Q ss_pred HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcc
Q psy10669 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLT 263 (337)
Q Consensus 185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~ 263 (337)
..+.. .....||..+.+.|+..+++.++++..+.+.++-.++++++++.+.+.|++++. ..-.+..+.....+.+++
T Consensus 232 ~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~ 309 (383)
T COG0075 232 YMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVD 309 (383)
T ss_pred HHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCC
Confidence 44432 223349999999999999999987777999999999999999999999999987 234455666666777877
Q ss_pred hHHHHH-HHhhcCceeccCc------ccchhh
Q psy10669 264 GSKVEL-VLEEIAIACNKNT------GISLAA 288 (337)
Q Consensus 264 ~~~~~~-~L~~~gI~v~~~~------girig~ 288 (337)
..++.. .++++||.+..-. -+|||.
T Consensus 310 ~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGh 341 (383)
T COG0075 310 DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGH 341 (383)
T ss_pred cHHHHHHHHHhCCEEecccccccCccEEEEec
Confidence 655555 5556899987654 688873
No 81
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.23 E-value=9.1e-10 Score=107.91 Aligned_cols=217 Identities=13% Similarity=0.149 Sum_probs=136.4
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT- 119 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~- 119 (337)
.++.-.+++...+.+.+ ++. .....++| +++++++|+++ .+.++|||.|+..++.++ +++
T Consensus 12 ~~~~e~~~~~~~l~~~~--------~~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~G 73 (379)
T PRK11658 12 MGDEELAAVKEVLRSGW--------ITT-GPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIGPG 73 (379)
T ss_pred CCHHHHHHHHHHHHcCC--------ccC-CHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCC
Confidence 34555666665543311 111 23467787 57889999985 577888999988888888 543
Q ss_pred -----------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEE
Q psy10669 120 -----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMF 155 (337)
Q Consensus 120 -----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~ 155 (337)
+.+ ++|+|+..+ .++...|+++|.++|+++|++++
T Consensus 74 d~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~~-~~G~~~d~~~i~~~a~~~gi~vi 152 (379)
T PRK11658 74 DEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVH-YAGAPADLDAIRAIGERYGIPVI 152 (379)
T ss_pred CEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEeC-CCCCcCCHHHHHHHHHHcCCeEE
Confidence 101 267887654 47889999999999999999999
Q ss_pred Eeccccccccc--------e--eeeec-------cCCchhhh---hHHHHHhhccCCCC--------------------C
Q psy10669 156 ADMSHISGLIA--------G--VKGVT-------KTGEKILY---DYEEKINNAVFPSL--------------------Q 195 (337)
Q Consensus 156 vD~AH~~Gli~--------g--~~~T~-------~~Gg~i~~---~l~~~i~~~~~p~~--------------------~ 195 (337)
+|+||..|..- | +.|.+ ..||++++ ++.+++......+. .
T Consensus 153 ~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 232 (379)
T PRK11658 153 EDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTP 232 (379)
T ss_pred EECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeecc
Confidence 99999988654 1 11111 24787775 35554433211110 0
Q ss_pred CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCC---C-CeEEEEEecC--CCcchHHHH
Q psy10669 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGT---D-VHLILIDLRK--NKLTGSKVE 268 (337)
Q Consensus 196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t---~-~h~v~V~~~~--~~~~~~~~~ 268 (337)
|. +..+..+.+|+...+....++..++-.++++++.+.|.+.++..+. ... . .|+.++.+.. .+.+..++.
T Consensus 233 G~--n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 310 (379)
T PRK11658 233 GY--KYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALM 310 (379)
T ss_pred cc--ccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHH
Confidence 11 1123344444444433456777888888899999999876543222 111 1 2566666643 245678888
Q ss_pred HHHhhcCceec
Q psy10669 269 LVLEEIAIACN 279 (337)
Q Consensus 269 ~~L~~~gI~v~ 279 (337)
+.|.+.||.+.
T Consensus 311 ~~L~~~gI~~~ 321 (379)
T PRK11658 311 EALKERGIGTG 321 (379)
T ss_pred HHHHHCCCCCc
Confidence 99999999765
No 82
>PRK14012 cysteine desulfurase; Provisional
Probab=99.23 E-value=3.7e-10 Score=111.27 Aligned_cols=228 Identities=15% Similarity=0.129 Sum_probs=142.2
Q ss_pred ccCCCCCHHHHHHHhhhhh--hccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669 37 ASENFTSLAVLECLGSCLQ--NKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC 113 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~--~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~ 113 (337)
++--.+++.|.+++...+. +.| ++++++.+.......+.-..+++.+++++|+++. .+.+++| |.|+..++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~----~v~~~~g~t~al~~~l 83 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLIGADPR----EIVFTSGATESDNLAI 83 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC----eEEEeCCHHHHHHHHH
Confidence 4445779999999987655 333 5565543322222223333456789999999763 4666655 77866555
Q ss_pred HhhC----Cc--------------------------------------------ccc---cccEEEEcCcc--cccccCh
Q psy10669 114 EKAL----PT--------------------------------------------NNA---RFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 114 ~aLl----~~--------------------------------------------~~a---~pklII~~~S~--~~~~~d~ 140 (337)
.++. ++ +.+ ++++|++.+.. .++..|+
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~ 163 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDI 163 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhH
Confidence 6653 32 111 26788776433 4789999
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eeeee-c----cCC--chhhh-hHHHHHhhccCC------CCCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-T----KTG--EKILY-DYEEKINNAVFP------SLQGG 197 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~----~~G--g~i~~-~l~~~i~~~~~p------~~~g~ 197 (337)
++|.++|+++|+++++|+||++|.+. .++++ + +.| ++++. +...++.+.... ...|+
T Consensus 164 ~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt 243 (404)
T PRK14012 164 AAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHGGGHERGMRSGT 243 (404)
T ss_pred HHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecCCCccCCccCCC
Confidence 99999999999999999999998775 12222 2 223 34444 322222221111 22578
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCC--CCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGG--TDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~--t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
++.+.++++..++..+. ...++..++..++++++.+.|.+ .++.+.+.. ...|...+.+... +..++...|.+
T Consensus 244 ~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ 319 (404)
T PRK14012 244 LPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV--EGESLIMALKD 319 (404)
T ss_pred cCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc--CHHHHHHhCCC
Confidence 89999999998887764 45667788888999999998877 466665421 2234444544422 23455555543
No 83
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.22 E-value=7.9e-10 Score=108.10 Aligned_cols=196 Identities=16% Similarity=0.114 Sum_probs=126.8
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-------------------------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT------------------------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~------------------------------- 119 (337)
....++| +.++++||.++ ++.++||+.|+..++.++ +++
T Consensus 29 ~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~ 99 (380)
T TIGR03588 29 PTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDID 99 (380)
T ss_pred hhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecC
Confidence 3356676 57899999986 577889999988888888 543
Q ss_pred -------------cc-----ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEecccccccc-----------c--ee
Q psy10669 120 -------------NN-----ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-----------A--GV 168 (337)
Q Consensus 120 -------------~~-----a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-----------~--g~ 168 (337)
.+ .++++|++.+ .++...|+++|.++|+++|+++++|++|+.|.. + ++
T Consensus 100 ~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~-~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~ 178 (380)
T TIGR03588 100 PDTGNIDEDALEKKLAAAKGKLPKAIVPVD-FAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATV 178 (380)
T ss_pred CCcCCcCHHHHHHHhhcccCCCceEEEEeC-CCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEE
Confidence 11 1257777653 468889999999999999999999999998852 1 22
Q ss_pred eeec--c-----CCchhhh---hHHHHHhhccCCCC---------------------CC-CCcHHHHHHHHHHHHHHhch
Q psy10669 169 KGVT--K-----TGEKILY---DYEEKINNAVFPSL---------------------QG-GPHNHAIGAIATAMLQAQSD 216 (337)
Q Consensus 169 ~~T~--~-----~Gg~i~~---~l~~~i~~~~~p~~---------------------~g-~~~~~~iaala~a~~e~~~~ 216 (337)
.|++ | .||++++ ++.++++.....+. .| +..+..+. .+.++.++ .
T Consensus 179 ~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~-aa~g~~qL--~ 255 (380)
T TIGR03588 179 FSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQ-AALGLSQL--K 255 (380)
T ss_pred EecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHH-HHHHHHHH--H
Confidence 3333 2 4787765 35554432111010 01 11112222 12222333 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhC-CCEEecC--C--CCCeEEEEEecC-CCcchHHHHHHHhhcCceecc
Q psy10669 217 EFKSYQAQVKANASHLSDEMIKR-GYHVVTG--G--TDVHLILIDLRK-NKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 217 ~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~--~--t~~h~v~V~~~~-~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.+++..++-.+|++++.+.|.+. ++.+... + ...+..+|.+.. .+.+..++.+.|.+.||.++.
T Consensus 256 ~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~ 325 (380)
T TIGR03588 256 KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQV 325 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCccc
Confidence 46788889999999999999884 3443321 1 123666776654 455788899999999998763
No 84
>PLN03032 serine decarboxylase; Provisional
Probab=99.22 E-value=1.8e-09 Score=105.67 Aligned_cols=237 Identities=14% Similarity=0.110 Sum_probs=150.7
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCC-CcceeecCCCchhHHHHHHhhC---
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQ-WGCNVQPYSGSPANFAVCEKAL--- 117 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~-~~~~v~~~Sgt~AN~~v~~aLl--- 117 (337)
.++.+.+++...+.+.+ |+|++. +.-.....++|..+++.++++||+++.+ || +..++||.||+..+.+..
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~-~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIE-SNYGVHSRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCccc-CCCCccHHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence 46567888877665543 788774 3323456789999999999999998653 32 333444999876555421
Q ss_pred Cc--------------------------------------cc--c------cccEEEEc--CcccccccChHHHHHHhhh
Q psy10669 118 PT--------------------------------------NN--A------RFDFLSSG--TTCYSRCLDYARFRQICDE 149 (337)
Q Consensus 118 ~~--------------------------------------~~--a------~pklII~~--~S~~~~~~d~~~l~eia~~ 149 (337)
+. .+ + +|.+|+++ .+..+...|+++|.+||++
T Consensus 110 ~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~ 189 (374)
T PLN03032 110 PDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKE 189 (374)
T ss_pred CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHH
Confidence 10 01 0 15577774 3446899999999999999
Q ss_pred cC-----CeEEEeccccccccce---------------ee-eec-----cCC-chhhh--hHHHHHhhc------cCCCC
Q psy10669 150 TD-----SIMFADMSHISGLIAG---------------VK-GVT-----KTG-EKILY--DYEEKINNA------VFPSL 194 (337)
Q Consensus 150 ~g-----a~l~vD~AH~~Gli~g---------------~~-~T~-----~~G-g~i~~--~l~~~i~~~------~~p~~ 194 (337)
+| ++++||+|++.|.+.. ++ +.| |+| |+++. .+.+.+... --+.+
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti 269 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATI 269 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcc
Confidence 96 5899999999988761 12 223 234 55543 232222110 12344
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
.|+-+....+++-.+++.+-...|.+..++.++++++|.+.|.+.|+.+.. +.....|.++... + .. ..++.
T Consensus 270 ~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~---~p~~~~V~f~~~~-~-~~---~~~~w 341 (374)
T PLN03032 270 MGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL---NELSSTVVFERPM-D-EA---FIKKW 341 (374)
T ss_pred cCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE---CCCceEEEEcCCC-c-Hh---Hhhee
Confidence 566555666777777777767788999999999999999999999999875 2333445555542 1 11 11223
Q ss_pred CceeccCcccch-hhhhHh
Q psy10669 275 AIACNKNTGISL-AAEIQA 292 (337)
Q Consensus 275 gI~v~~~~giri-g~~~~t 292 (337)
.+.+.++ ++|| -|+..|
T Consensus 342 ~l~~~~~-~~hi~vm~~~~ 359 (374)
T PLN03032 342 QLACEGD-IAHVVVMPNVT 359 (374)
T ss_pred eecccCC-EEEEEECCCCC
Confidence 3333332 7777 456665
No 85
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.21 E-value=3e-09 Score=103.25 Aligned_cols=235 Identities=16% Similarity=0.119 Sum_probs=144.5
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH---HHHHHHHHHHHHhhcCCCCCCCcceeec--CCCchhHHHHHHhh
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI---DEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSGSPANFAVCEKA 116 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~---~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sgt~AN~~v~~aL 116 (337)
+|..|++++...+.+ |. +.|+..+.-++.- .++-..++++++++|+.+.. | .|.+ .|||.|+-++...+
T Consensus 3 ~p~~v~~~~~~~~~~-~~--~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~-~--~v~~~~gsgT~a~ea~~~nl 76 (349)
T TIGR01364 3 LPEEVLEQAQKELLN-FN--GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN-Y--EVLFLQGGATGQFAAVPLNL 76 (349)
T ss_pred CCHHHHHHHHHHHhC-cc--CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC-c--eEEEEcCCchHHHHHHHHhc
Confidence 688999999877553 33 4444444333222 25556678899999997432 2 3433 45688988888888
Q ss_pred CCc-----------------c---------------------------cc---cccEEEEcC--cccccccChHHHHHHh
Q psy10669 117 LPT-----------------N---------------------------NA---RFDFLSSGT--TCYSRCLDYARFRQIC 147 (337)
Q Consensus 117 l~~-----------------~---------------------------~a---~pklII~~~--S~~~~~~d~~~l~eia 147 (337)
+++ + .. ++++|.+++ ++.+...| +++
T Consensus 77 ~~~~~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~l~ 151 (349)
T TIGR01364 77 LAEGKVADYIVTGAWSKKAAKEAKKYGVVNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----ELP 151 (349)
T ss_pred CCCCCeEEEEECCHHHHHHHHHHHHhCCcEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----eec
Confidence 643 0 00 145555553 33344333 778
Q ss_pred hhcCCeEEEeccccccccc------e-ee-eec----cCC-chhhh--hHHHHHhhcc-----------CCCCCCCCcHH
Q psy10669 148 DETDSIMFADMSHISGLIA------G-VK-GVT----KTG-EKILY--DYEEKINNAV-----------FPSLQGGPHNH 201 (337)
Q Consensus 148 ~~~ga~l~vD~AH~~Gli~------g-~~-~T~----~~G-g~i~~--~l~~~i~~~~-----------~p~~~g~~~~~ 201 (337)
+.++++++||+++++|... + +. +.+ |.| |++.. ++.+++++.. .....+||+.+
T Consensus 152 ~~~~~l~iVDavss~g~~~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~ 231 (349)
T TIGR01364 152 DVKNAPLVADMSSNILSRPIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTF 231 (349)
T ss_pred ccCCCeEEEEccccccCccCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHH
Confidence 8889999999999999998 2 22 332 345 54432 3333222110 01224799999
Q ss_pred HHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC--CCC-eEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 202 AIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKR-GYHVVTGG--TDV-HLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 202 ~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~--t~~-h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
.+.++..+++++.+. ..+...++..++++++.+.|.+. |+...... ..+ .++.+.+....++ .+..+.+.+.||
T Consensus 232 ~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~-~~~~~~~~~~Gi 310 (349)
T TIGR01364 232 AIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELE-KRFLKEAEERGL 310 (349)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHh-HHHHHHHHHCCC
Confidence 999999999999876 58999999999999999999998 66444211 112 2344443332222 344456667898
Q ss_pred eeccCc----ccchhh
Q psy10669 277 ACNKNT----GISLAA 288 (337)
Q Consensus 277 ~v~~~~----girig~ 288 (337)
.+..-. .+|++.
T Consensus 311 ~~~~~~~~~g~vRvS~ 326 (349)
T TIGR01364 311 VSLKGHRSVGGMRASI 326 (349)
T ss_pred cccCCccccCeeEEEC
Confidence 554321 456553
No 86
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.21 E-value=2.8e-09 Score=104.83 Aligned_cols=229 Identities=11% Similarity=0.089 Sum_probs=142.3
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----- 117 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----- 117 (337)
+|.|.+++...+. ++..++ +.+. +....++| ++++++++.+. .+.++|||.||.+++..+.
T Consensus 59 ~~~i~~a~~~~~~-~~~~~~---~~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAG-RLTLTS---RAFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHh-hccccc---cccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 9999999987654 443322 2222 34445565 57788998764 6888999999988887762
Q ss_pred ------C-c---------------------------------------------ccc-----cccEEEEcCcccc---cc
Q psy10669 118 ------P-T---------------------------------------------NNA-----RFDFLSSGTTCYS---RC 137 (337)
Q Consensus 118 ------~-~---------------------------------------------~~a-----~pklII~~~S~~~---~~ 137 (337)
+ . .+. ++++||+.+ .++ ..
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~-~~~~~G~~ 203 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEP-IQGEAGVI 203 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEcc-ccCCCCCc
Confidence 1 1 000 146777753 332 33
Q ss_pred cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch-----hhh--hHHHHHhhccC
Q psy10669 138 LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK-----ILY--DYEEKINNAVF 191 (337)
Q Consensus 138 ~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~-----i~~--~l~~~i~~~~~ 191 (337)
.| +++|+++|+++|++|++|++|+ .|-.+ ++ ....| .||+ +++ ++.+.+.+...
T Consensus 204 ~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~ 283 (401)
T PRK00854 204 IPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQH 283 (401)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCC
Confidence 43 8899999999999999999997 33221 10 11112 1343 333 45555543323
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
...++ .++...++...++..+.+ ....+++.++.++|.+.|++.++.... ......++.+.+.....+..++.+.
T Consensus 284 ~~t~~-~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~ 359 (401)
T PRK00854 284 GSTFG-GNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGGARQYCEA 359 (401)
T ss_pred CCCCC-cCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEEecCchhHHHHHHH
Confidence 33343 466666666666665532 335788888999999999987655332 1245667777664433356777888
Q ss_pred HhhcCceeccCc--ccchhhhh
Q psy10669 271 LEEIAIACNKNT--GISLAAEI 290 (337)
Q Consensus 271 L~~~gI~v~~~~--girig~~~ 290 (337)
|.+.||.+.... .||+..+.
T Consensus 360 L~~~GV~v~~~~~~~lR~~p~~ 381 (401)
T PRK00854 360 LKERGLLAKDTHDHTIRLAPPL 381 (401)
T ss_pred HHHCCeEEecCCCCEEEEeCCc
Confidence 888899997532 67777553
No 87
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.19 E-value=1.1e-09 Score=109.11 Aligned_cols=232 Identities=12% Similarity=0.057 Sum_probs=143.0
Q ss_pred CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC--CCcceeecCCCchhHHHHHHhhC
Q psy10669 40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE--QWGCNVQPYSGSPANFAVCEKAL 117 (337)
Q Consensus 40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~--~~~~~v~~~Sgt~AN~~v~~aLl 117 (337)
..++|.+.+.+.+.+...+ |+|.+ .|.. .++|..+++.+++++|++.+ +. .-+..++||.||+..+.+..
T Consensus 51 t~~~p~~~~~~~~~l~~~~--~np~s---~~~~--~~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~ar 122 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM--IDKDE---YPQT--AEIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAMK 122 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC--CCccc---CccH--HHHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHHH
Confidence 4558899999987765432 55544 2332 38999999999999999721 11 01112445899765554321
Q ss_pred ---------------Cc--------------------------------------ccc-----cccEEEEcCcc--cccc
Q psy10669 118 ---------------PT--------------------------------------NNA-----RFDFLSSGTTC--YSRC 137 (337)
Q Consensus 118 ---------------~~--------------------------------------~~a-----~pklII~~~S~--~~~~ 137 (337)
++ .+. .|.+|+++..+ .+..
T Consensus 123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i 202 (431)
T TIGR01788 123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY 202 (431)
T ss_pred HHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc
Confidence 11 011 15677776433 4799
Q ss_pred cChHHHHHHhhhc------CCeEEEeccccccccc-------------e---eeee-cc-----CC-chhhh-h---HHH
Q psy10669 138 LDYARFRQICDET------DSIMFADMSHISGLIA-------------G---VKGV-TK-----TG-EKILY-D---YEE 184 (337)
Q Consensus 138 ~d~~~l~eia~~~------ga~l~vD~AH~~Gli~-------------g---~~~T-~~-----~G-g~i~~-~---l~~ 184 (337)
.|+++|.++|+++ |++++||+||+.+.+. + ++.. || +| |+++. + +.+
T Consensus 203 dpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~ 282 (431)
T TIGR01788 203 EDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPE 282 (431)
T ss_pred CCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcch
Confidence 9999999999999 9999999999976642 1 2222 32 34 55442 2 222
Q ss_pred HHhhc---c-----CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEE
Q psy10669 185 KINNA---V-----FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILI 255 (337)
Q Consensus 185 ~i~~~---~-----~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V 255 (337)
.+... + -+.+.++-.....++.-..++.+-...+++..++.++++++|+++|.+. +|++++.....+++..
T Consensus 283 ~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~F 362 (431)
T TIGR01788 283 ELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAF 362 (431)
T ss_pred hheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEE
Confidence 22210 0 0112222222234444445555545678899999999999999999985 5999863223444443
Q ss_pred EecC---CCcchHHHHHHHhhcCceec
Q psy10669 256 DLRK---NKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 256 ~~~~---~~~~~~~~~~~L~~~gI~v~ 279 (337)
.+.. .+++..++.+.|.+.|+.++
T Consensus 363 r~~~~~~~~~~~~~l~~~L~~~G~~~~ 389 (431)
T TIGR01788 363 KLKDDADPGYTLYDLSHRLRERGWIVP 389 (431)
T ss_pred EeCCCCCCCcCHHHHHHHHHHCCCccc
Confidence 3332 13567788999999999754
No 88
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.18 E-value=1.3e-09 Score=103.75 Aligned_cols=235 Identities=16% Similarity=0.156 Sum_probs=146.5
Q ss_pred eeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669 35 LIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112 (337)
Q Consensus 35 l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v 112 (337)
-+.|-|+. +|+++++|... + + .+..-|+--+...++| ++++++||.+. .+..+|||+||+.+
T Consensus 3 ~f~SDn~~g~~~~m~eam~~a--~-~----~~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~la 66 (342)
T COG2008 3 DFRSDNVAGPTPEMREALAAA--N-A----VGDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLA 66 (342)
T ss_pred ccccCccCCCCHHHHHHHHhc--c-c----cCCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHH
Confidence 35688888 99999999753 2 1 3445566566778888 58899999953 57779999999999
Q ss_pred HHhhCCc--------------------------------------------c--cc--------cccEEEEc-Ccccccc
Q psy10669 113 CEKALPT--------------------------------------------N--NA--------RFDFLSSG-TTCYSRC 137 (337)
Q Consensus 113 ~~aLl~~--------------------------------------------~--~a--------~pklII~~-~S~~~~~ 137 (337)
+.+.++| + +. +|.+++.+ +..++..
T Consensus 67 l~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV 146 (342)
T COG2008 67 LAAHCQPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV 146 (342)
T ss_pred HHHhcCCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence 9999876 1 11 15555554 4446777
Q ss_pred cChHHHH---HHhhhcCCeEEEeccccc-cccc----------e---e--eeec----cCCchhhh--hHHHHHhhc--c
Q psy10669 138 LDYARFR---QICDETDSIMFADMSHIS-GLIA----------G---V--KGVT----KTGEKILY--DYEEKINNA--V 190 (337)
Q Consensus 138 ~d~~~l~---eia~~~ga~l~vD~AH~~-Gli~----------g---~--~~T~----~~Gg~i~~--~l~~~i~~~--~ 190 (337)
.+.++|. ++|+++|..|.+|.|-.. ++++ + + ++|. +-|.+++. ++.++.+.. .
T Consensus 147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~ 226 (342)
T COG2008 147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKR 226 (342)
T ss_pred cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHH
Confidence 7777655 789999999999999765 2222 1 2 2231 23445544 455533321 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH--HHHHHHHHH-hCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN--ASHLSDEMI-KRGYHVVTGGTDVHLILIDLRKNKLTGSKV 267 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n--a~~l~~~L~-~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~ 267 (337)
..+. -...-.+| ++....++ +.-++.....+| |+.|+++|. ..|+++... +++-++.+++....++....
T Consensus 227 ~Ggl--~~k~r~la---A~~~~~l~-~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~l~~~~i~~l~~ 299 (342)
T COG2008 227 AGGL--MRKARFLA---AQGLYALE-DDVWRLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVRLPESAIEALRL 299 (342)
T ss_pred hccc--HhhhhHHH---HHHHHHHh-ccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEEECChHHHHHHHh
Confidence 1211 11112222 23333333 223566667777 999999999 569999865 89999999987655444444
Q ss_pred HHHHhhcCceeccCc-ccchhhhhHh
Q psy10669 268 ELVLEEIAIACNKNT-GISLAAEIQA 292 (337)
Q Consensus 268 ~~~L~~~gI~v~~~~-girig~~~~t 292 (337)
...+...|+....-. -+|+.|..-|
T Consensus 300 ~~~~~~~~~~~~~~~~~vRfvts~a~ 325 (342)
T COG2008 300 AGALFYRGVLIGAHGEIVRFVTSWAT 325 (342)
T ss_pred hchhheeeeeccCCCceEEEEeeccC
Confidence 444444455444321 2666655443
No 89
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.17 E-value=7.5e-09 Score=100.89 Aligned_cols=246 Identities=13% Similarity=0.056 Sum_probs=150.4
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCc----CccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYY----GGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~----~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
.+.+.|.---+|+.|++|+...+.+ |. +.|+..+ ...++ .++-..++++++++||.+.+++ +-+...||+.
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~-~~--~~~~g~~~~~hr~~~f-~~~~~~~~~~l~~l~~~~~~~~-v~~~~gsgt~ 78 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLD-WN--GSGMSVMEISHRSKEF-EAVAEEAEADLRELLNIPDNYK-VLFLQGGASL 78 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhc-cc--cCCccccccCCCCHHH-HHHHHHHHHHHHHHhCCCCCcE-EEEEcCCchH
Confidence 3567777778899999999876432 21 2232222 22222 3555567889999999733212 2233355578
Q ss_pred hHHHHHHhhCCc--------------------------------------------c-cc--cccEEEEcC--ccccccc
Q psy10669 108 ANFAVCEKALPT--------------------------------------------N-NA--RFDFLSSGT--TCYSRCL 138 (337)
Q Consensus 108 AN~~v~~aLl~~--------------------------------------------~-~a--~pklII~~~--S~~~~~~ 138 (337)
|+-+++..++.+ + .. ++++|.+.+ ++.+...
T Consensus 79 ~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~ 158 (360)
T PRK05355 79 QFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEF 158 (360)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEec
Confidence 888888888653 1 01 167777764 4445555
Q ss_pred ChHHHHHHhhhcCCeEEEeccccccccc------e-eeee-c----cCC-chhh-h-hHHHHHhhc----------cCC-
Q psy10669 139 DYARFRQICDETDSIMFADMSHISGLIA------G-VKGV-T----KTG-EKIL-Y-DYEEKINNA----------VFP- 192 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~Gli~------g-~~~T-~----~~G-g~i~-~-~l~~~i~~~----------~~p- 192 (337)
| +|.+| +|++++||++|++|... + +.++ + |.| |++. . ++.+++++. ..+
T Consensus 159 ~--~i~~i---~g~l~vVDavss~g~~~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 233 (360)
T PRK05355 159 H--ELPDT---GDVPLVADMSSDILSRPIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKTHADND 233 (360)
T ss_pred C--ccccc---CCCcEEEEcCccccCccCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHHHHHHhcC
Confidence 2 34444 79999999999999988 2 2222 2 334 4443 2 333333321 011
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCE-EecC-CCCC-eEEEEEecCCCcchHHHH
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYH-VVTG-GTDV-HLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~-v~~~-~t~~-h~v~V~~~~~~~~~~~~~ 268 (337)
...+||+.+.+.|+..+++++.+. ..+.+.++..++++++.+.|++.|+- .+.. ...+ .++.+.+... ....+.-
T Consensus 234 ~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-~~~~~~~ 312 (360)
T PRK05355 234 SMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE-ELDKKFL 312 (360)
T ss_pred CccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh-HHHHHHH
Confidence 124899999999999999999876 57899999999999999999998852 2111 1112 2333333221 2223444
Q ss_pred HHHhhcCceeccCc----ccchhh
Q psy10669 269 LVLEEIAIACNKNT----GISLAA 288 (337)
Q Consensus 269 ~~L~~~gI~v~~~~----girig~ 288 (337)
+.+.+.||.+..-. .+|++.
T Consensus 313 ~~~~~~Gi~~~~~~~~~g~vRiS~ 336 (360)
T PRK05355 313 AEAKAAGLVGLKGHRSVGGMRASI 336 (360)
T ss_pred HHHHHCCCcccCCCCccCcEEEEC
Confidence 55666799874321 466654
No 90
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.17 E-value=6.2e-09 Score=102.60 Aligned_cols=237 Identities=16% Similarity=0.108 Sum_probs=141.0
Q ss_pred cceeeecc---CCCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669 31 NGIELIAS---ENFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS 104 (337)
Q Consensus 31 ~~i~l~as---en~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S 104 (337)
+...-+.| ++++ +|.|.+|+...+.+-+..+ ..+ .+....+++ ++++++++.+. ...++|
T Consensus 35 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~L~~~~~~~~-----~~f~~S 100 (397)
T TIGR03246 35 KEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIG---NGY--TNEPVLRLA----KKLVDATFADK-----VFFCNS 100 (397)
T ss_pred CEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccccc---Ccc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCC
Confidence 34444445 5666 9999999987655322111 111 123334444 57788887653 577789
Q ss_pred CchhHHHHHHhh---------CCc------------------------------------------------ccc---cc
Q psy10669 105 GSPANFAVCEKA---------LPT------------------------------------------------NNA---RF 124 (337)
Q Consensus 105 gt~AN~~v~~aL---------l~~------------------------------------------------~~a---~p 124 (337)
|+.||.+++... .++ +.. +.
T Consensus 101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 180 (397)
T TIGR03246 101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKT 180 (397)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCe
Confidence 999999888865 121 000 13
Q ss_pred cEEEEcCccccccc-------ChHHHHHHhhhcCCeEEEeccccccccc--e---------e----eeecc--CCchhhh
Q psy10669 125 DFLSSGTTCYSRCL-------DYARFRQICDETDSIMFADMSHISGLIA--G---------V----KGVTK--TGEKILY 180 (337)
Q Consensus 125 klII~~~S~~~~~~-------d~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~----~~T~~--~Gg~i~~ 180 (337)
++||+. ..+++.+ .+++|+++|+++|++||+|+.| .|+ + | + .+.+| .||+.++
T Consensus 181 aavi~E-pi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~-Gr~G~~~a~~~~gv~pDi~t~~K~lggG~pig 257 (397)
T TIGR03246 181 CAVIVE-PIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGV-GRTGELYAYMHYGVTPDILTSAKALGGGFPIG 257 (397)
T ss_pred EEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcC-CccccchhhhhcCCCCCEEEeehhhhCCccee
Confidence 567776 4665443 3667889999999999999999 666 2 1 1 11112 1444332
Q ss_pred ------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCe
Q psy10669 181 ------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVH 251 (337)
Q Consensus 181 ------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h 251 (337)
++.+.+.......+++ .++...++..+++..+.+ ++..+++.++.++|.+.|++.+ +.+... .....
T Consensus 258 av~~~~~i~~~~~~~~~~~t~~-~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~ 333 (397)
T TIGR03246 258 AMLTTTEIAAHLKVGTHGTTYG-GNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGL 333 (397)
T ss_pred EEEEcHHHHHhccCCCcCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCce
Confidence 4555555433333443 566666666666655432 4678899999999999998854 332221 12334
Q ss_pred EEEEEecCC-CcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669 252 LILIDLRKN-KLTGSKVELVLEEIAIACNKNT--GISLAA 288 (337)
Q Consensus 252 ~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~~~--girig~ 288 (337)
++.+.+.+. ......+...|.+.||.+.... -||+..
T Consensus 334 ~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p 373 (397)
T TIGR03246 334 LIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAP 373 (397)
T ss_pred EEEEEEcCchhhHHHHHHHHHHHCCeEEeecCCCEEEEeC
Confidence 555555431 1135567777888899987532 466653
No 91
>PRK10534 L-threonine aldolase; Provisional
Probab=99.16 E-value=2.6e-09 Score=102.26 Aligned_cols=221 Identities=15% Similarity=0.194 Sum_probs=135.9
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-- 119 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-- 119 (337)
.||.+++++..... +...|+......++| +.+++++|.++ .+.+.+|+.++...+.+++.+
T Consensus 12 p~~~~~~a~~~~~~--------~~~~Y~~~~~~~~L~----~~la~~~g~~~-----~~v~~~g~~a~~~~l~~~~~~gd 74 (333)
T PRK10534 12 PSRAMLEAMMAAPV--------GDDVYGDDPTVNALQ----DYAAELSGKEA-----ALFLPTGTQANLVALLSHCERGE 74 (333)
T ss_pred CCHHHHHHHHhccC--------CCcccCCCHHHHHHH----HHHHHHhCCCe-----EEEeCchHHHHHHHHHHhcCCCC
Confidence 48999999854211 112243344556777 57789999886 467778888887777776543
Q ss_pred ----------------------------------------cc--c---------cccEEEEcCcccccccChHHHH---H
Q psy10669 120 ----------------------------------------NN--A---------RFDFLSSGTTCYSRCLDYARFR---Q 145 (337)
Q Consensus 120 ----------------------------------------~~--a---------~pklII~~~S~~~~~~d~~~l~---e 145 (337)
++ + ++++|++..-..+...|.+.|. +
T Consensus 75 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~~~l~~i~~ 154 (333)
T PRK10534 75 EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPREYLKQAWE 154 (333)
T ss_pred eeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCCCCeecCHHHHHHHHH
Confidence 00 0 2456666532346777777665 5
Q ss_pred HhhhcCCeEEEecccccccc---c-----------eeeeec-c-----CCchhhh--hHHHHHhhccCCCCCCCCcHHH-
Q psy10669 146 ICDETDSIMFADMSHISGLI---A-----------GVKGVT-K-----TGEKILY--DYEEKINNAVFPSLQGGPHNHA- 202 (337)
Q Consensus 146 ia~~~ga~l~vD~AH~~Gli---~-----------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~- 202 (337)
+|+++|++|++|+||..+-. + .+..|. | .||++++ ++.+.+.....+... +...+.
T Consensus 155 ~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~ 233 (333)
T PRK10534 155 FTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRARRWRKMTGG-GMRQAGI 233 (333)
T ss_pred HHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHHHHHHHHHHHHHhCC-chhhHHH
Confidence 78888999999999775321 1 122222 2 2555654 566666544333211 112212
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc
Q psy10669 203 IGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 203 iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
.++. ++..+ + +..++.++..++.++|.+.|.+.|+++.. ++++.+++.++. .+..++.+.|.+.||.+.+..
T Consensus 234 ~~a~--~~~~l-~-~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~nfv~~~~~~--~~~~~~~~~l~~~gi~v~~~~ 305 (333)
T PRK10534 234 LAAA--GLYAL-K-HNVARLQEDHDNAAWLAEQLREAGADVMR--QDTNMLFVRVGE--EQAAALGEYMRERNVLINASP 305 (333)
T ss_pred HHHH--HHHHH-H-hhHHHHHHHHHHHHHHHHHHHhCCCccCC--CCceEEEEECCc--hhHHHHHHHHHHcCeeecCCc
Confidence 1222 22122 1 22356667778889999999999998865 578888888864 245677889999999998755
Q ss_pred ccchhh
Q psy10669 283 GISLAA 288 (337)
Q Consensus 283 girig~ 288 (337)
.+|+..
T Consensus 306 ~~rl~~ 311 (333)
T PRK10534 306 IVRLVT 311 (333)
T ss_pred eEEEEE
Confidence 556643
No 92
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.15 E-value=2.6e-09 Score=102.37 Aligned_cols=204 Identities=11% Similarity=0.036 Sum_probs=130.6
Q ss_pred cCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCCchhHHHHHHhhCC---------------c------------
Q psy10669 68 YGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSGSPANFAVCEKALP---------------T------------ 119 (337)
Q Consensus 68 ~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sgt~AN~~v~~aLl~---------------~------------ 119 (337)
|.......++|+.+++.++++||.+ .+.+ .+..++||.||+.++.++.. +
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~ 107 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS 107 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH
Confidence 4455567789998889999999986 2212 34445558998777776520 1
Q ss_pred ----------------------------c--c-c------cccEEEEcC-c-ccccccChHHHHHHhhhcCCeEEEeccc
Q psy10669 120 ----------------------------N--N-A------RFDFLSSGT-T-CYSRCLDYARFRQICDETDSIMFADMSH 160 (337)
Q Consensus 120 ----------------------------~--~-a------~pklII~~~-S-~~~~~~d~~~l~eia~~~ga~l~vD~AH 160 (337)
+ + . +|++|++.. + ..+...|+++|.++|+++|+++++|+||
T Consensus 108 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~ 187 (345)
T cd06450 108 VEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAY 187 (345)
T ss_pred HHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechh
Confidence 0 0 1 245665553 2 3568889999999999999999999999
Q ss_pred cccccce---------------eeeeccCCchhhhhHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669 161 ISGLIAG---------------VKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225 (337)
Q Consensus 161 ~~Gli~g---------------~~~T~~~Gg~i~~~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v 225 (337)
..|.+.. ++++.+|. ..+....+.....++++..++..+....+++.+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~--------------l~~p~g~g~~~~~~~~~~~~l~~l~~~g~~~~~~~~ 253 (345)
T cd06450 188 GGFLLPFPEPRHLDFGIERVDSISVDPHKY--------------GLVPLGCSAVLVRALKLWATLRRFGRDGYGEHIDRI 253 (345)
T ss_pred hHHHhhChhhHHHhcCccccCEEEEchhHh--------------hCCCcchHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9887541 11122220 000000000000155566666666556678999999
Q ss_pred HHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC---CcchHHHHHHHhhcCce-eccC-----cccchhh
Q psy10669 226 KANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN---KLTGSKVELVLEEIAIA-CNKN-----TGISLAA 288 (337)
Q Consensus 226 ~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~---~~~~~~~~~~L~~~gI~-v~~~-----~girig~ 288 (337)
.+++++|.+.|.+. |++++. ..+..++.+.+... +.+..++.+.|.+.|+. +... ..+||+.
T Consensus 254 ~~~~~~l~~~L~~~~~~~~~~-~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~ 325 (345)
T cd06450 254 VDLAKYLAELIRADPGFELLG-EPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVV 325 (345)
T ss_pred HHHHHHHHHHHhcCCCeEEec-CCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEe
Confidence 99999999999885 788764 34567777766543 35667888888887544 4321 1567754
No 93
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.14 E-value=1.2e-08 Score=103.27 Aligned_cols=234 Identities=10% Similarity=0.057 Sum_probs=131.9
Q ss_pred eccCCCCCHHHHHHHhhh--hhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH-
Q psy10669 36 IASENFTSLAVLECLGSC--LQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV- 112 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~--l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v- 112 (337)
=...+..+|.+.+++.+. +. .| ..|.......|. .++....++.+++++|.+. +.+...+|+.++...
T Consensus 76 G~~~~~~~p~i~~~~~~~~~~~-~~-tpYq~e~~sqG~---lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l 146 (481)
T PRK04366 76 GSCTMKYNPKINEKVARLPGFA-EL-HPLQPEETVQGA---LELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGL 146 (481)
T ss_pred cccCCCCCHHHHHHHHhCcchh-cC-CCCCChhhhhHH---HHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHH
Confidence 335566799999988764 11 11 011000112222 2444555678999999985 577777777654432
Q ss_pred --HHh-hCC-------c------------------------------------ccc-----cccEEEEc-Ccccccc-cC
Q psy10669 113 --CEK-ALP-------T------------------------------------NNA-----RFDFLSSG-TTCYSRC-LD 139 (337)
Q Consensus 113 --~~a-Ll~-------~------------------------------------~~a-----~pklII~~-~S~~~~~-~d 139 (337)
+.+ +++ . .+. ++++|++. ++.++.. .|
T Consensus 147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~d 226 (481)
T PRK04366 147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERN 226 (481)
T ss_pred HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchH
Confidence 221 111 1 011 25666664 4334443 58
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc-------e---eeeeccC--------C----chhhh--hHHHHHhhc------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA-------G---VKGVTKT--------G----EKILY--DYEEKINNA------ 189 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T~~~--------G----g~i~~--~l~~~i~~~------ 189 (337)
+++|.++|+++|++++||+||..|+++ | +++++|| | |++.. ++.+++...
T Consensus 227 l~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g 306 (481)
T PRK04366 227 ILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDG 306 (481)
T ss_pred HHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccC
Confidence 999999999999999999999866544 1 3333322 2 45433 343333100
Q ss_pred ---c----CC-----CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEe
Q psy10669 190 ---V----FP-----SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL 257 (337)
Q Consensus 190 ---~----~p-----~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~ 257 (337)
. ++ ...++++...+.+....+..+-...+++.+++.++++++|+++|.+. +++.......|.+.+++
T Consensus 307 ~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~ 385 (481)
T PRK04366 307 DRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSG 385 (481)
T ss_pred CceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEEC
Confidence 0 01 00122222222222222333323344677788999999999999987 66653222335666664
Q ss_pred ---cCCCcchHHHHHHHhhcCceec
Q psy10669 258 ---RKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 258 ---~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
...+.+..++.++|.+.||.+.
T Consensus 386 ~~~~~~g~~~~~v~~~L~~~Gi~~~ 410 (481)
T PRK04366 386 KKLKETGVRTLDIAKRLLDYGFHPP 410 (481)
T ss_pred ccccccCCCHHHHHHHHHHCCccCC
Confidence 3335577889999999999876
No 94
>PLN02721 threonine aldolase
Probab=99.14 E-value=1.4e-08 Score=97.55 Aligned_cols=226 Identities=16% Similarity=0.179 Sum_probs=132.5
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC-c-
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP-T- 119 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~-~- 119 (337)
.+|.+++++... + .+ .+..+|. ...+++| +.+++++|.+. .+..++|+.+|+.++.++++ +
T Consensus 18 ~~~~~~~a~~~~---~--~~-~~~~~~~--~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~~l~~~~~~~g 80 (353)
T PLN02721 18 PTDAMRAAMANA---E--VD-DDVLGYD--PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLISVLVHCDVRG 80 (353)
T ss_pred CCHHHHHHHHhc---c--CC-CcccCCC--HHHHHHH----HHHHHHhCCce-----eEEecCccHHHHHHHHHHccCCC
Confidence 378888887532 1 11 1222332 2246676 57899999875 47778899998888887754 3
Q ss_pred ---------------------------------------------ccc--------cccEEEEcCc-cc--ccccC---h
Q psy10669 120 ---------------------------------------------NNA--------RFDFLSSGTT-CY--SRCLD---Y 140 (337)
Q Consensus 120 ---------------------------------------------~~a--------~pklII~~~S-~~--~~~~d---~ 140 (337)
.+. ++++|++... +. +...| +
T Consensus 81 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l 160 (353)
T PLN02721 81 SEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYT 160 (353)
T ss_pred CeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHH
Confidence 001 2567777532 22 34455 5
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc-----------e---eeeec-c-----CCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA-----------G---VKGVT-K-----TGEKILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~-----------g---~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
++|.++|+++|++|++|+||..|... + +..++ | .|++++. ++.+.+.... ....+++
T Consensus 161 ~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~ 239 (353)
T PLN02721 161 DKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKAKRLR-KTLGGGM 239 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhHHHHH-HhcCCCe
Confidence 67888999999999999999765321 1 12222 3 3544443 4544433211 1111122
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC-CcchHHHHHHHhhcCc
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN-KLTGSKVELVLEEIAI 276 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~-~~~~~~~~~~L~~~gI 276 (337)
....+.+. .++..+ + ...++.++..++.+.+.+.|.+. |+++......+.++++.+... +.+...+.+.|.+.||
T Consensus 240 ~~~~~~~~-~~~~~l-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi 316 (353)
T PLN02721 240 RQVGVLAA-AALVAL-Q-ENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGV 316 (353)
T ss_pred ehhHHHHH-HHHHHH-H-HHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCc
Confidence 22221211 122222 1 22334566678899999999986 776522234566777777542 2467888999999999
Q ss_pred eeccCc--ccchhh
Q psy10669 277 ACNKNT--GISLAA 288 (337)
Q Consensus 277 ~v~~~~--girig~ 288 (337)
.+.+-. .|||..
T Consensus 317 ~v~~~~~~~lR~~~ 330 (353)
T PLN02721 317 LLMPGNSSRIRVVT 330 (353)
T ss_pred EEecCCCceEEEEe
Confidence 998654 778864
No 95
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.13 E-value=2e-09 Score=108.37 Aligned_cols=200 Identities=17% Similarity=0.166 Sum_probs=142.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669 77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------ 119 (337)
Q Consensus 77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------ 119 (337)
.-..+++.+++.||++++ .....| |.||.+++.|++++
T Consensus 71 ~i~eAqe~aA~~fgAd~t-----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 71 PIKEAQELAARVFGADHT-----YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLY 145 (557)
T ss_pred cHHHHHHHHHHHhCCCce-----EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccc
Confidence 344566889999999984 333456 57899999999875
Q ss_pred -----------c---ccc--c-cE-EEEcCcccccccChHHHHHHhhhcCCeEEEeccccc-----cccc----------
Q psy10669 120 -----------N---NAR--F-DF-LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS-----GLIA---------- 166 (337)
Q Consensus 120 -----------~---~a~--p-kl-II~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~-----Gli~---------- 166 (337)
+ ++. - |+ ||..++.|+...|.+++.+.++++++++.+|.+|.+ ++..
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~ 225 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF 225 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence 0 011 2 54 444588889999999999999999999999999986 2222
Q ss_pred eeeeeccC-Cchhhh------h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH----HHH
Q psy10669 167 GVKGVTKT-GEKILY------D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN----ASH 231 (337)
Q Consensus 167 g~~~T~~~-Gg~i~~------~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n----a~~ 231 (337)
.+.||||. ||+-.+ + ..++++.+..-...++|..+.+|++.+|.... ...+++..+.+++. .++
T Consensus 226 ~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~-~~~G~~l~~~~~~~~i~~r~~ 304 (557)
T COG1982 226 VTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQE-GNAGRELWQEVIDEAIDFRKA 304 (557)
T ss_pred EEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHH
Confidence 24678774 454432 1 14577777655567899999999999965554 45667774444444 444
Q ss_pred HHHHHHh-CCCEEecCC--------------------CCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc
Q psy10669 232 LSDEMIK-RGYHVVTGG--------------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 232 l~~~L~~-~G~~v~~~~--------------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
+++...+ .+|.+...+ .|.--+.|.+...|+.+..+++.|.+.||...+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~ 376 (557)
T COG1982 305 LRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETG 376 (557)
T ss_pred HHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecC
Confidence 4444444 357766532 25666777777999999999999999999988766
No 96
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.12 E-value=4.9e-09 Score=102.75 Aligned_cols=241 Identities=14% Similarity=0.036 Sum_probs=148.0
Q ss_pred ceeeeccCCCCCHH-HHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC--CCchh
Q psy10669 32 GIELIASENFTSLA-VLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY--SGSPA 108 (337)
Q Consensus 32 ~i~l~asen~~~p~-V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~--Sgt~A 108 (337)
.+++.+.=.-++|. |++++...+. +.. +.+. ...++-..+++.++++||++.+ + .|.|+ |||.+
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~-----~~~----hr~~-~f~~~~~~~r~~l~~l~~~~~~-~--~v~~~~gs~T~~ 79 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALL-----GRS----HRQK-PVKALLKRVIEGTRELLSLPEG-Y--EVGIVPGSDTGA 79 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhc-----ccC----cCCH-HHHHHHHHHHHHHHHHhCCCCC-c--eEEEECCchHHH
Confidence 34556655566788 9999974321 111 2222 3355667789999999998532 1 45543 67888
Q ss_pred HHHHHHhhCCc----------------c-c-----c-------------------c-ccEEEEcCc--ccccccChHHHH
Q psy10669 109 NFAVCEKALPT----------------N-N-----A-------------------R-FDFLSSGTT--CYSRCLDYARFR 144 (337)
Q Consensus 109 N~~v~~aLl~~----------------~-~-----a-------------------~-pklII~~~S--~~~~~~d~~~l~ 144 (337)
+.+++.+|+++ . . . + +|+|.+++. +.+...|+++|.
T Consensus 80 ~~~~~~~l~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~~~~~V~~~h~~t~tG~~~pi~~I~ 159 (378)
T PRK03080 80 WEMALWSLLGARRVDHLAWESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVDFDRDVVFTWNGTTTGVRVPVARWI 159 (378)
T ss_pred HHHHHHhcCCCCcceEEEeCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcCCCCCEEEEecCCccceeccchhhc
Confidence 77777888752 0 0 0 0 233666543 347888988887
Q ss_pred HHhhhcCCeEEEeccccccccc-------eeee-ecc-----CC-chhh-h-hHHHHHhhcc------------------
Q psy10669 145 QICDETDSIMFADMSHISGLIA-------GVKG-VTK-----TG-EKIL-Y-DYEEKINNAV------------------ 190 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~-------g~~~-T~~-----~G-g~i~-~-~l~~~i~~~~------------------ 190 (337)
+ +++|++++||++|++|.+. .+.+ .+| .| |++. . ++.+++++..
T Consensus 160 ~--~~~g~~~vVDa~qs~G~~pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 237 (378)
T PRK03080 160 G--ADREGLTICDATSAAFALPLDWSKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAI 237 (378)
T ss_pred c--ccCCCeEEEecccccccCCCCHHHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHh
Confidence 7 7789999999999999998 2333 332 34 4443 2 3433333210
Q ss_pred ---C-CCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-CEEecC-CC--CCeEEEEEecCC-
Q psy10669 191 ---F-PSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-YHVVTG-GT--DVHLILIDLRKN- 260 (337)
Q Consensus 191 ---~-p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~-~t--~~h~v~V~~~~~- 260 (337)
| .+..+||+.+.+.++..+++++.+. ..+...++..++++++.+.|.+.| +.++.. .. .+.++.+.+...
T Consensus 238 ~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~ 317 (378)
T PRK03080 238 ENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ 317 (378)
T ss_pred hhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch
Confidence 1 1223567777788889999999765 457888999999999999999876 566531 11 123454444320
Q ss_pred -CcchHHHHHHHhhcCceecc------Ccccchhh
Q psy10669 261 -KLTGSKVELVLEEIAIACNK------NTGISLAA 288 (337)
Q Consensus 261 -~~~~~~~~~~L~~~gI~v~~------~~girig~ 288 (337)
+.+...+.+ |.+.||.+.. ...+||+.
T Consensus 318 ~~~~~~~~~~-l~~~~i~v~~g~~~~~~~~vRis~ 351 (378)
T PRK03080 318 AAVDAAAVAK-LLRENGAVDIEPYRDAPNGLRIWC 351 (378)
T ss_pred HHHHHHHHHH-HHHcCCeeccccccCCCCcEEEec
Confidence 234444444 4444777642 12678773
No 97
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.12 E-value=6.7e-09 Score=102.34 Aligned_cols=227 Identities=19% Similarity=0.166 Sum_probs=140.8
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh------
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA------ 116 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL------ 116 (337)
+|+|.+|+...+. +++.+ ++.+ .+....++| +++++++|.+. .+.++||+.||.+++..+
T Consensus 55 ~p~v~~a~~~~~~-~~~~~---~~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~~ 120 (401)
T TIGR01885 55 HPKIVKALTEQAQ-KLTLS---SRAF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGYK 120 (401)
T ss_pred CHHHHHHHHHHHH-hcccc---cccc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhhh
Confidence 8999999987644 44322 2222 234445565 47788898653 577899999999888863
Q ss_pred ----CC-c------------------------------------------------c--ccc--c--cEEEEcCccccc-
Q psy10669 117 ----LP-T------------------------------------------------N--NAR--F--DFLSSGTTCYSR- 136 (337)
Q Consensus 117 ----l~-~------------------------------------------------~--~a~--p--klII~~~S~~~~- 136 (337)
.+ + + +.+ + ..||+. +.+++
T Consensus 121 ~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E-~v~~~~ 199 (401)
T TIGR01885 121 VKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVE-PIQGEA 199 (401)
T ss_pred hcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEe-CccCCC
Confidence 11 1 0 000 1 245443 34332
Q ss_pred --ccC----hHHHHHHhhhcCCeEEEeccccccccc-e-------------eeeecc--CCch-----hhh--hHHHHHh
Q psy10669 137 --CLD----YARFRQICDETDSIMFADMSHISGLIA-G-------------VKGVTK--TGEK-----ILY--DYEEKIN 187 (337)
Q Consensus 137 --~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~-g-------------~~~T~~--~Gg~-----i~~--~l~~~i~ 187 (337)
..+ +++|+++|+++|+++++|++| .|+-- | +...+| .||+ +++ ++.+.+.
T Consensus 200 G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~ 278 (401)
T TIGR01885 200 GVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIK 278 (401)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhcc
Confidence 232 788999999999999999999 56421 1 111123 1332 233 5666555
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCC--cch
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNK--LTG 264 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~--~~~ 264 (337)
....+.+++ .+++..++...++..+.+ + ...+++.+++++|.+.|.+.+..++. -.....+..|.+.... .+.
T Consensus 279 ~~~~~~t~~-~~p~~~~aa~a~L~~i~~-~--~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i~~~~~~~~~~~ 354 (401)
T TIGR01885 279 PGEHGSTYG-GNPLACAVAVAALEVLEE-E--KLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAIVIDESKTGRTA 354 (401)
T ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHHHh-c--cHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEEEeccCcchhHH
Confidence 433444454 456666666666665532 2 46678888999999999997655542 1124556666665432 356
Q ss_pred HHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 265 SKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
.++.+.|.+.||.+.+.. .+||+.+
T Consensus 355 ~~l~~~l~~~Gv~v~~~~~~~lRi~p~ 381 (401)
T TIGR01885 355 WDLCLKLKEKGLLAKPTHGNIIRLAPP 381 (401)
T ss_pred HHHHHHHHhCCEEEEecCCCEEEEeCC
Confidence 778888888899987643 6888875
No 98
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.12 E-value=4.6e-09 Score=102.77 Aligned_cols=166 Identities=10% Similarity=0.048 Sum_probs=100.0
Q ss_pred ccEEEEcC-cccccccCh-HHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc----------CCchhhh-
Q psy10669 124 FDFLSSGT-TCYSRCLDY-ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK----------TGEKILY- 180 (337)
Q Consensus 124 pklII~~~-S~~~~~~d~-~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~----------~Gg~i~~- 180 (337)
+++|++.. +..+...|+ ++|.++|+++|+++++|++|..|... .++++ +| .+|++..
T Consensus 160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~ 239 (398)
T cd00613 160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVK 239 (398)
T ss_pred eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEh
Confidence 57677663 334566776 99999999999999999999876533 12222 22 2345543
Q ss_pred -hHHHHHhhc-----------------------------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHH
Q psy10669 181 -DYEEKINNA-----------------------------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANAS 230 (337)
Q Consensus 181 -~l~~~i~~~-----------------------------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~ 230 (337)
++.+.+... ..+.+++ ..+...++.+++++.+....+++.+++..++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~-~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~ 318 (398)
T cd00613 240 KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT-GQALLALMAAMYIVYLGPEGLKEIAERAHLNAN 318 (398)
T ss_pred hhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 344433110 0011121 122333334444455444456788999999999
Q ss_pred HHHHHHHhCCCEEecCCCCCeEEEEEecCC-CcchHHHHHHHhhcCceeccC-----cccchhhhh
Q psy10669 231 HLSDEMIKRGYHVVTGGTDVHLILIDLRKN-KLTGSKVELVLEEIAIACNKN-----TGISLAAEI 290 (337)
Q Consensus 231 ~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~~-----~girig~~~ 290 (337)
+|.++|.+.|......+...+++.+.+... +.+..++.+.|.+.||.+... ..|||....
T Consensus 319 ~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~ 384 (398)
T cd00613 319 YLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTE 384 (398)
T ss_pred HHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCC
Confidence 999999997655422223345566666542 345677888888889988652 167775433
No 99
>PRK05968 hypothetical protein; Provisional
Probab=99.11 E-value=1.5e-09 Score=106.93 Aligned_cols=225 Identities=13% Similarity=0.050 Sum_probs=132.4
Q ss_pred eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669 33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112 (337)
Q Consensus 33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v 112 (337)
-.+..|-.|..+.+ +.+...+..+ ..++.-+|+ ++....++| +++++++|.++ ++.++||+.|+..+
T Consensus 28 ~pi~~~~~~~~~~~-~~~~~~~~~~-~~~~~Y~r~--~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~a 94 (389)
T PRK05968 28 PPIFQTSLFTFDSY-DEMEDVYAGE-KVRPIYSRG--DNPTVRAFE----EMLAKLEGAED-----ARGFASGMAAISST 94 (389)
T ss_pred CCccCCcceecCCH-HHHHHhhcCC-CCCccccCC--CChhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 34566667765554 2332222211 111112222 335567888 57899999986 68889999999888
Q ss_pred HHhhCCc----------------------------------------c--cccccEEEEc-Ccc-cccccChHHHHHHhh
Q psy10669 113 CEKALPT----------------------------------------N--NARFDFLSSG-TTC-YSRCLDYARFRQICD 148 (337)
Q Consensus 113 ~~aLl~~----------------------------------------~--~a~pklII~~-~S~-~~~~~d~~~l~eia~ 148 (337)
+.+++++ + ..++|+|++. +++ .....|+++|.++|+
T Consensus 95 l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~la~ 174 (389)
T PRK05968 95 VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKALPGAKLLYLESPTSWVFELQDVAALAALAK 174 (389)
T ss_pred HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhcccCCEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 8888664 1 1126888775 222 234578888889999
Q ss_pred hcCCeEEEeccccccccc-----e---e-eeecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669 149 ETDSIMFADMSHISGLIA-----G---V-KGVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATA 209 (337)
Q Consensus 149 ~~ga~l~vD~AH~~Gli~-----g---~-~~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a 209 (337)
++|+++++|++|..++.. | + .|.+| .||+++. ++.+++....+|.+.+..+ +..|++.
T Consensus 175 ~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~-~~~A~~~-- 251 (389)
T PRK05968 175 RHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLS-PFEAWLL-- 251 (389)
T ss_pred HcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCC-hHHHHHH--
Confidence 999999999999888643 1 2 22222 2566654 4556555433343333333 3444432
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec-CCCCCe----------EEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 210 MLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT-GGTDVH----------LILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 210 ~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~-~~t~~h----------~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
+..+ .....+.++-.+|++++++.|.+ .++..+. .+..+| ++.+.+.. +.+...+.+.|...+|
T Consensus 252 l~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~ 327 (389)
T PRK05968 252 LRGL--RTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRL 327 (389)
T ss_pred Hccc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEE
Confidence 3333 23467888888999999999988 4665443 333443 66666642 3233344444443333
No 100
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.10 E-value=1.7e-09 Score=105.51 Aligned_cols=191 Identities=12% Similarity=0.071 Sum_probs=126.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|.+. .+.++||+.||..++.+++++
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~ 108 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVT 108 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEE
Confidence 556678888 58889999875 688899999999999998754
Q ss_pred -----------ccc--cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc--
Q psy10669 120 -----------NNA--RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK-- 173 (337)
Q Consensus 120 -----------~~a--~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~-- 173 (337)
+.. ++|+|++.... .+...|+++|.++|+++|++++||++|..|+.. .++++ +|
T Consensus 109 ~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~~~~g~Divv~S~tK~l 188 (369)
T cd00614 109 FVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPLELGADIVVHSATKYI 188 (369)
T ss_pred EeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCChhhhCCcEEEeccceec
Confidence 001 26888876222 246778999999999999999999999998763 12222 22
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CE-
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YH- 242 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~- 242 (337)
.||++++ ++.+++..... . .|+...+..++++ +..+ .....++++..+|++++++.|.+.+ +.
T Consensus 189 ~g~~~~~gG~v~~~~~~l~~~l~~~~~-~-~g~~~~p~~a~~~--l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~ 262 (369)
T cd00614 189 GGHSDVIAGVVVGSGEALIQRLRFLRL-A-LGTILSPFDAWLL--LRGL--KTLPLRMERHSENALKVAEFLEKHPKVER 262 (369)
T ss_pred cCCCCceEEEEEeCcHHHHHHHHHHHH-h-hCCCCCHHHHHHH--HcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 2566765 35555554321 1 2333334333332 2222 2456789999999999999999864 32
Q ss_pred EecC---------------CCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 243 VVTG---------------GTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 243 v~~~---------------~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
|... ...+.++.+.+.. +...+.+.++...+..
T Consensus 263 V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~---~~~~~~~f~~~l~~~~ 310 (369)
T cd00614 263 VYYPGLPSHPQHELAKKQMSGYGGVFSFELKG---GLEAAKKFLNALKLFS 310 (369)
T ss_pred EECCCCCCCchHHHHHHhcCCCceEEEEEeCC---CHHHHHHHHHcCCcce
Confidence 2221 1346788887753 3455667777655543
No 101
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.08 E-value=5.1e-09 Score=101.96 Aligned_cols=197 Identities=14% Similarity=0.129 Sum_probs=126.2
Q ss_pred cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-Cc------------------------------
Q psy10669 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-PT------------------------------ 119 (337)
Q Consensus 71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-~~------------------------------ 119 (337)
...++++| ++++++||.++ .+.++|||.|...++.++- ++
T Consensus 24 g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di 94 (363)
T PF01041_consen 24 GPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDI 94 (363)
T ss_dssp SHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-B
T ss_pred CHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEec
Confidence 46778898 58899999886 7999999999999989972 21
Q ss_pred ------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-----------eeeeec-
Q psy10669 120 ------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-----------GVKGVT- 172 (337)
Q Consensus 120 ------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g~~~T~- 172 (337)
+.+ ++|.|++.+ .|+...|+.+|.++|+++|++||-|+||+.|--- ++.|.+
T Consensus 95 ~~~~~~id~~~~~~~i~~~t~ai~~~h-~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~ 173 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITPKTKAILVVH-LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHP 173 (363)
T ss_dssp ETTTSSB-HHHHHHHHHTTEEEEEEE--GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESST
T ss_pred cCCcCCcCHHHHHHHhccCccEEEEec-CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCC
Confidence 111 268888875 8899999999999999999999999999997532 223332
Q ss_pred -c-----CCchhhh---hHHHHHhhccCCCC--------------CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Q psy10669 173 -K-----TGEKILY---DYEEKINNAVFPSL--------------QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA 229 (337)
Q Consensus 173 -~-----~Gg~i~~---~l~~~i~~~~~p~~--------------~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na 229 (337)
| .||+|++ ++.+++......+. ..+..++.+ ..++++.++ ...++..++=.+|+
T Consensus 174 ~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~-~AAigl~QL--~~L~~~~~~R~~~a 250 (363)
T PF01041_consen 174 TKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSEL-QAAIGLAQL--KRLDEIIARRRENA 250 (363)
T ss_dssp TSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHH-HHHHHHHHH--HTHHHHHHHHHHHH
T ss_pred CCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHH-HHHHHHHHH--HHhhhhHHHHHHHH
Confidence 2 3888876 35554432111110 011122222 223334444 34667788888999
Q ss_pred HHHHHHHHhC-CCEEec--CC---CCCeEEEEEecCCC-cchHHHHHHHhhcCceecc
Q psy10669 230 SHLSDEMIKR-GYHVVT--GG---TDVHLILIDLRKNK-LTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 230 ~~l~~~L~~~-G~~v~~--~~---t~~h~v~V~~~~~~-~~~~~~~~~L~~~gI~v~~ 280 (337)
+.+.+.|.+. |+.... .+ ..-|..+|.+.+.. .+-..+.+.|.+.||.+..
T Consensus 251 ~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~ 308 (363)
T PF01041_consen 251 QRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRP 308 (363)
T ss_dssp HHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBC
T ss_pred HHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccc
Confidence 9999999984 554544 11 23456677776542 2567788999999999886
No 102
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.08 E-value=2.7e-09 Score=104.92 Aligned_cols=161 Identities=14% Similarity=0.069 Sum_probs=106.5
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|.++ ++.+.||+.|+.+++.+++++
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~ 129 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHS 129 (386)
T ss_pred CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEE
Confidence 566678888 58899999875 688999999998888888754
Q ss_pred ----------ccc---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---eeee-cc--
Q psy10669 120 ----------NNA---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VKGV-TK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~~T-~~-- 173 (337)
+.+ ++|+|++.. ++ .+...|+++|.++|+++|+++++|+||..+... | ++++ +|
T Consensus 130 ~~~~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l 209 (386)
T PRK06767 130 FCDMETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYI 209 (386)
T ss_pred EeCCCCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCccee
Confidence 101 268887753 33 347789999999999999999999999877654 1 2222 22
Q ss_pred ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEe
Q psy10669 174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVV 244 (337)
Q Consensus 174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~ 244 (337)
.||++++ ++.+++....+..+ |+...+..|+++ +..+ .....+.++..+|++++++.|.+ .+++.+
T Consensus 210 ~g~g~~~gG~v~~~~~~i~~~~~~~~~~~-g~~~~~~~a~l~--~~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v 284 (386)
T PRK06767 210 GGHGDVVAGVTICKTRALAEKIRPMRKDI-GGIMAPFDAWLL--LRGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEGV 284 (386)
T ss_pred cCCCCceeEEEEeChHHHHHHHHHHHHHh-CCCCCHHHHHHH--HcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 1577765 33333221112222 222233334332 2222 23457788999999999999998 477743
No 103
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.07 E-value=1.3e-08 Score=99.03 Aligned_cols=213 Identities=15% Similarity=0.147 Sum_probs=142.3
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-Cc-
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-PT- 119 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-~~- 119 (337)
+...-++++..++.+.+ ++.-..+.++| +.+++++|+++ .+.+.|||.|+...+.+|. ++
T Consensus 13 i~~~e~~~v~~vl~sg~---------i~~G~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 13 IGEEELAAVQEVLKSGW---------LTGGPFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred cchHHHHHHHHHHHcCC---------eecChHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhcCCCCC
Confidence 45566677766655432 33345678899 48899999997 6888999999988888552 21
Q ss_pred -----------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEE
Q psy10669 120 -----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMF 155 (337)
Q Consensus 120 -----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~ 155 (337)
+.+ ++|.||.-+ .|+...|.+.|.+||++||.++|
T Consensus 75 DeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVh-l~G~~~dm~~i~~la~~~~l~vI 153 (374)
T COG0399 75 DEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVH-LAGQPCDMDAIMALAKRHGLPVI 153 (374)
T ss_pred CEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEeh-hccCCCCHHHHHHHHHHcCCeEE
Confidence 111 279888865 89999999999999999999999
Q ss_pred Eeccccccccc--------e--eeeec---c-----CCchhhh---hHHHHHhhccCCCCCC-------------CCc-H
Q psy10669 156 ADMSHISGLIA--------G--VKGVT---K-----TGEKILY---DYEEKINNAVFPSLQG-------------GPH-N 200 (337)
Q Consensus 156 vD~AH~~Gli~--------g--~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~~~g-------------~~~-~ 200 (337)
-|+||+.|-.= | .++.+ | .||.+++ ++.+++....+.|+.. +.. .
T Consensus 154 EDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~ 233 (374)
T COG0399 154 EDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLT 233 (374)
T ss_pred EEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHH
Confidence 99999987654 1 11221 1 4899987 3666554332222211 122 2
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec--CC--CCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT--GG--TDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~--~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
...||+..+ ++ ...++..++=.++++...+.|.+. ++.+.. .+ ..-|+.++-+...+.+-..+...|.+.|
T Consensus 234 ~iqAAigl~--QL--~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~g 309 (374)
T COG0399 234 EIQAAIGLA--QL--ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAG 309 (374)
T ss_pred HHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCC
Confidence 333443333 33 234455666667888888888874 454443 11 3467888888776667788899999887
Q ss_pred ce
Q psy10669 276 IA 277 (337)
Q Consensus 276 I~ 277 (337)
|.
T Consensus 310 i~ 311 (374)
T COG0399 310 VG 311 (374)
T ss_pred CC
Confidence 76
No 104
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.07 E-value=1.9e-08 Score=95.58 Aligned_cols=162 Identities=14% Similarity=0.200 Sum_probs=110.3
Q ss_pred ccEEEEcCcc--cccccChHHHH---HHhhhcCCeEEEeccccccccce----------------eeee-cc-------C
Q psy10669 124 FDFLSSGTTC--YSRCLDYARFR---QICDETDSIMFADMSHISGLIAG----------------VKGV-TK-------T 174 (337)
Q Consensus 124 pklII~~~S~--~~~~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~g----------------~~~T-~~-------~ 174 (337)
+++|++.+.. .+...|.+++. ++|+++|+++++|+||+.+...+ +.++ +| +
T Consensus 133 ~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~ 212 (350)
T cd00609 133 TKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLR 212 (350)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccc
Confidence 6888887533 25777777665 79999999999999998744321 1222 22 1
Q ss_pred Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 175 GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 175 Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
.|+++. ++.+.+.... +...++++.+...++..+++... ..++..++++.++++++.+.|.+.+...........
T Consensus 213 ~G~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~ 290 (350)
T cd00609 213 IGYLIAPPEELLERLKKLL-PYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGF 290 (350)
T ss_pred eEEEecCHHHHHHHHHHHH-HhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccE
Confidence 256654 3666666543 23356778888888877776653 466888999999999999999997765422223455
Q ss_pred EEEEEecCCCcchHHHHHHHhhcCceeccCc--------ccchhh
Q psy10669 252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT--------GISLAA 288 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--------girig~ 288 (337)
.+++.+... .+...+.+.|.++||.+.... .|||+.
T Consensus 291 ~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~ 334 (350)
T cd00609 291 FLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSF 334 (350)
T ss_pred EEEEecCCC-ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEe
Confidence 666666543 256778889999999988642 577753
No 105
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.05 E-value=3.4e-09 Score=104.42 Aligned_cols=193 Identities=14% Similarity=0.102 Sum_probs=126.2
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+++| +++++++|.++ ++.+.||+.|+..++.+++++
T Consensus 57 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~ 127 (391)
T TIGR01328 57 GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVD 127 (391)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEE
Confidence 556678888 58899999986 688999999999888888654
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|+.. .++++ +|
T Consensus 128 ~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~l 207 (391)
T TIGR01328 128 FINMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYI 207 (391)
T ss_pred EECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccc
Confidence 001 26788775 333 357789999999999999999999999988764 12222 22
Q ss_pred ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-E
Q psy10669 174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-V 243 (337)
Q Consensus 174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v 243 (337)
.||+++. ++.+++.........|+...+..|+++.. .+ .....+.++..+|++++++.|.+. ++. |
T Consensus 208 gg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~--~L--~tl~~r~~~~~~na~~la~~L~~~p~v~~v 283 (391)
T TIGR01328 208 GGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILR--GL--KTLNIRMKRHSENAMKVAEYLKSHPAVEKV 283 (391)
T ss_pred cCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHh--Cc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 1577665 45555543212223344445555554432 22 234577899999999999999983 454 3
Q ss_pred ecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 244 VTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 244 ~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
...+..+| ++.++++ + +...+.+.++...+..
T Consensus 284 ~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~--~-~~~~~~~f~~~l~~~~ 330 (391)
T TIGR01328 284 YYPGFEDHPGHDIAAKQMRMGGGMITFELK--G-GFAGAKKLLNNLKLIR 330 (391)
T ss_pred ECCCCCCCccHHHHHHhCCCCCceEEEEeC--C-CHHHHHHHHHhCCcce
Confidence 33344444 5555554 2 3345566666655443
No 106
>PLN02452 phosphoserine transaminase
Probab=99.05 E-value=4.2e-08 Score=95.81 Aligned_cols=253 Identities=15% Similarity=0.081 Sum_probs=152.2
Q ss_pred cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCC-CCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec--CCC
Q psy10669 29 QINGIELIASENFTSLAVLECLGSCLQNKYSEGLP-GKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSG 105 (337)
Q Consensus 29 q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~-g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sg 105 (337)
|.+.+++.|-=-.+|+.|++++...+.+--+.|.. -.-.++..+ ..++-..+++.++++|+.+.. | .|.| .||
T Consensus 5 ~~~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~-f~~i~~~~~~~L~~l~~~p~~-y--~v~~l~Gsg 80 (365)
T PLN02452 5 QGRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKE-FLSIIQKAEADLRELLDIPDN-Y--EVLFLQGGA 80 (365)
T ss_pred CCceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchH-HHHHHHHHHHHHHHHhCCCCC-c--eEEEEeCcc
Confidence 33457888888889999999999876642112210 111122222 345666677899999998532 3 3444 455
Q ss_pred chhHHHHHHhhCCc-----------------cccc------------------------------ccEEEEc--Cccccc
Q psy10669 106 SPANFAVCEKALPT-----------------NNAR------------------------------FDFLSSG--TTCYSR 136 (337)
Q Consensus 106 t~AN~~v~~aLl~~-----------------~~a~------------------------------pklII~~--~S~~~~ 136 (337)
|.++-++...|+++ +.++ ++.|.+. +++.+.
T Consensus 81 t~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv 160 (365)
T PLN02452 81 STQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWELTPDAKFVHICANETIHGV 160 (365)
T ss_pred HHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcE
Confidence 88888888888753 0010 1222222 333333
Q ss_pred c-cChHHHHHHhhhcCCeEEEeccccccccc------eeeee--c----cCC-chhh-h-hHHHHHhhc---cCC-----
Q psy10669 137 C-LDYARFRQICDETDSIMFADMSHISGLIA------GVKGV--T----KTG-EKIL-Y-DYEEKINNA---VFP----- 192 (337)
Q Consensus 137 ~-~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~T--~----~~G-g~i~-~-~l~~~i~~~---~~p----- 192 (337)
. -| +.+++ +++++||+++++|... ++.++ + |.| |++. . ++.+++... .++
T Consensus 161 ~~~~---~~~i~---~~~lvVDa~Ss~g~~pidv~~~~v~~~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~ 234 (365)
T PLN02452 161 EFKD---YPDVG---NVPLVADMSSNFLSKPVDVSKYGVIYAGAQKNVGPSGVTIVIIRKDLIGNARPITPGMLDYKIHA 234 (365)
T ss_pred ecCc---ccccC---CCeEEEECCccccCcccCHHHcCEEEEecccccCCCCeEEEEEcHHHHhhcccCCCchhhHHHHH
Confidence 2 22 22332 3899999999999887 33222 2 334 3333 2 343332211 111
Q ss_pred ---CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHh-CCCEEecCC-C-CCe-EEEEEecCCCcch
Q psy10669 193 ---SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIK-RGYHVVTGG-T-DVH-LILIDLRKNKLTG 264 (337)
Q Consensus 193 ---~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~-t-~~h-~v~V~~~~~~~~~ 264 (337)
.+..||+.+.+.++..+++++.+. ..+...++..+++++|.+.|.+ .||-..... . .+. +++..+.... .-
T Consensus 235 ~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~-~~ 313 (365)
T PLN02452 235 ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSE-LE 313 (365)
T ss_pred hcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCch-hH
Confidence 123799999999999999999764 5688999999999999999998 577111110 1 122 3333333333 44
Q ss_pred HHHHHHHhhcCceeccCc----ccchhh-hhHh
Q psy10669 265 SKVELVLEEIAIACNKNT----GISLAA-EIQA 292 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~----girig~-~~~t 292 (337)
.+..+.+++.|+..-+-. |+|+++ ++++
T Consensus 314 ~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~ 346 (365)
T PLN02452 314 AEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMP 346 (365)
T ss_pred HHHHHHHHHCCCcccCCccccCceEEECcCCCC
Confidence 566677777899876533 888875 4454
No 107
>PLN02242 methionine gamma-lyase
Probab=99.05 E-value=4.8e-09 Score=104.24 Aligned_cols=164 Identities=12% Similarity=0.058 Sum_probs=113.3
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++....++| +++++++|.++ .+.++||+.|+..++.+++++
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~ 144 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITT 144 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceE
Confidence 567778888 58899999986 577899999999999998754
Q ss_pred -----------c--c-c-cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc----e---eeeec-c-
Q psy10669 120 -----------N--N-A-RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA----G---VKGVT-K- 173 (337)
Q Consensus 120 -----------~--~-a-~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g---~~~T~-~- 173 (337)
+ + . ++|+|++. .++ .+...|+++|.++|+++|+++++|++|..+.+. | ++++. |
T Consensus 145 ~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~~~g~divv~S~SK~ 224 (418)
T PLN02242 145 TFVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPARLGADVVVHSISKF 224 (418)
T ss_pred EEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHHHcCCcEEEEeCccc
Confidence 1 1 1 25777776 222 246779999999999999999999999755443 1 22222 2
Q ss_pred -------CCchhhh--hHHHHHhhccCC--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669 174 -------TGEKILY--DYEEKINNAVFP--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH 242 (337)
Q Consensus 174 -------~Gg~i~~--~l~~~i~~~~~p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~ 242 (337)
.||++++ ++.+.+...... ...|.+..+..|++..- .+ ......+++..+|++++++.|.+.|++
T Consensus 225 l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~--~l--~tl~~r~~~~~~~a~~la~~L~~~~~~ 300 (418)
T PLN02242 225 ISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSE--RL--PHLSLRMKEHCRRAMEYAKRMKELGLK 300 (418)
T ss_pred cCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHc--CC--CcHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 1577765 455555533111 12455555666654432 22 245667889999999999999999999
Q ss_pred EecC
Q psy10669 243 VVTG 246 (337)
Q Consensus 243 v~~~ 246 (337)
|...
T Consensus 301 V~yP 304 (418)
T PLN02242 301 VIYP 304 (418)
T ss_pred EECC
Confidence 8863
No 108
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.03 E-value=8.2e-09 Score=101.27 Aligned_cols=190 Identities=11% Similarity=0.021 Sum_probs=123.8
Q ss_pred CccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------
Q psy10669 69 GGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------- 119 (337)
Q Consensus 69 ~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------- 119 (337)
.|+...+.+| ++++++.|.++ .+.++||+.|+..++.+++++
T Consensus 47 ~gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v 117 (377)
T TIGR01324 47 RGTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDI 117 (377)
T ss_pred CCCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEE
Confidence 4777888899 57889999885 678889999999999998764
Q ss_pred -----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eecc-
Q psy10669 120 -----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVTK- 173 (337)
Q Consensus 120 -----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~~- 173 (337)
+.+ ++|+|++. .++ .+...|+++|.++|+++|++++||++|..|++. | ++ +.+|
T Consensus 118 ~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~ 197 (377)
T TIGR01324 118 TYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKY 197 (377)
T ss_pred EEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCcee
Confidence 001 26888876 333 246778888999999999999999999999885 2 22 2222
Q ss_pred -------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-E
Q psy10669 174 -------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-H 242 (337)
Q Consensus 174 -------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~ 242 (337)
.||++.. ++.+++... ....|+...|.-+.+.. .-+ .....++++..+||..+++.|.+. .+ +
T Consensus 198 l~G~~d~~gG~v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~--rgl--~tl~~R~~~~~~~a~~la~~L~~~p~v~~ 271 (377)
T TIGR01324 198 LVGHSDIMIGTVVANARTWDQLREH--SYLMGQMVDADDAYTTL--RGL--RTLGVRLKQHQESSLAIAKWLSEQPEVAR 271 (377)
T ss_pred ccCCCCceEEEEEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHH--hhh--hhHHHHHHHHHHHHHHHHHHHHhCCCcCE
Confidence 2566654 344444422 12345554454443332 222 234577999999999999999984 22 3
Q ss_pred EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 243 VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 243 v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
|+..+ .-.+++.+.+... +...+.+.++...
T Consensus 272 v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~--~~~~~~~~~~~l~ 317 (377)
T TIGR01324 272 VLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL--TQKQVHAFLDHLQ 317 (377)
T ss_pred EECCCCCCCccHHHHHHhccCCCceEEEEECCC--CHHHHHHHHHhCC
Confidence 33321 2367888887531 2334455555533
No 109
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.03 E-value=6e-08 Score=93.22 Aligned_cols=222 Identities=18% Similarity=0.164 Sum_probs=141.2
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~ 107 (337)
.-|+|-.++|-. +|.+++++....... ..++ ... ..++ |+.++++++++. .++.+++|+ +
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~------~~~-~~~l----r~~ia~~~~~~~----~~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYP------DPD-PAEL----KQALADYYGVDP----EQILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCC------CCC-HHHH----HHHHHHHhCcCh----HHEEEcCCHHH
Confidence 345555555444 889999988653211 1111 111 1233 467889999765 368888884 6
Q ss_pred hHHHHHHhhCCc-----------------------------------------ccc---cccEEEEcCccc--ccccChH
Q psy10669 108 ANFAVCEKALPT-----------------------------------------NNA---RFDFLSSGTTCY--SRCLDYA 141 (337)
Q Consensus 108 AN~~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~~--~~~~d~~ 141 (337)
+...++.+++++ +.+ ++++|+++..++ +...|.+
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~ 162 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS 162 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 766666777543 001 267777763333 5889999
Q ss_pred HHHHHhhhc--CCeEEEeccccccccc--------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCC
Q psy10669 142 RFRQICDET--DSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQ 195 (337)
Q Consensus 142 ~l~eia~~~--ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~ 195 (337)
++.++|+.+ |+++++|++|. ++.. .+.++. | .| |+++. ++.+.+.+...+ .
T Consensus 163 ~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~ 239 (346)
T TIGR01141 163 DIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP--F 239 (346)
T ss_pred HHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--C
Confidence 999999887 99999999987 2211 112232 2 13 56554 566666654333 2
Q ss_pred CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
+.+++...+...++... ..+++.++++.++.+++.+.|.+. |+++.. .....+++++.. +..++.+.|.+.
T Consensus 240 -~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~g~~~~~~~~~---~~~~~~~~L~~~ 311 (346)
T TIGR01141 240 -NLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYP--SDANFVLIRFPR---DADALFEALLEK 311 (346)
T ss_pred -CCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC--CcCCEEEEecCC---CHHHHHHHHHHC
Confidence 33445555544444332 135778889999999999999986 888764 445677887764 577888889999
Q ss_pred Cceecc
Q psy10669 275 AIACNK 280 (337)
Q Consensus 275 gI~v~~ 280 (337)
||.+.+
T Consensus 312 gI~v~~ 317 (346)
T TIGR01141 312 GIIVRD 317 (346)
T ss_pred CeEEEe
Confidence 999875
No 110
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.00 E-value=9.4e-08 Score=93.82 Aligned_cols=228 Identities=15% Similarity=0.115 Sum_probs=133.9
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---- 117 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl---- 117 (337)
.+|.|.+++...+. ++..+ ++.+ .+....++| +.++++++.+. .+.++|||.||.+++..+.
T Consensus 48 ~~p~v~~a~~~~~~-~~~~~---~~~~-~~~~~~~~~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQ-KLTLT---SRAF-YNDVLGLAE----KYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHH-hcccc---cccc-cCHHHHHHH----HHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 49999999987643 44322 2222 122233444 57788888753 5778999999988887552
Q ss_pred -------Cc------------------------------------------------c--c--ccccEEEEcCc--cccc
Q psy10669 118 -------PT------------------------------------------------N--N--ARFDFLSSGTT--CYSR 136 (337)
Q Consensus 118 -------~~------------------------------------------------~--~--a~pklII~~~S--~~~~ 136 (337)
++ + + .++++|++.+. .-++
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~ 193 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGV 193 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCC
Confidence 11 0 0 01467777532 2245
Q ss_pred ccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch-----hhh--hHHHHHhhcc
Q psy10669 137 CLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK-----ILY--DYEEKINNAV 190 (337)
Q Consensus 137 ~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~-----i~~--~l~~~i~~~~ 190 (337)
..+ +++|+++|+++|++|++|+.|+ .|--+ + +....| .||+ ++. ++.+.+....
T Consensus 194 ~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~ 273 (400)
T PTZ00125 194 IVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGE 273 (400)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCC
Confidence 555 8889999999999999999995 23111 1 111122 1232 222 5656555432
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCE-EecCCCCCeEEEEEecC-CCcch
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYH-VVTGGTDVHLILIDLRK-NKLTG 264 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~-v~~~~t~~h~v~V~~~~-~~~~~ 264 (337)
....+ +.++...++...++..+.+. .+.+++.+..+++++.|.+. ++. .+. ....+..|.+.. .+.+.
T Consensus 274 ~~~t~-~~~~~~~~aa~~~l~~i~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~--~~g~~~~v~~~~~~~~~~ 347 (400)
T PTZ00125 274 HGSTY-GGNPLACAVAVEALEVLKEE---KLAENAQRLGEVFRDGLKELLKKSPWVKEIR--GKGLLNAIVFDHSDGVNA 347 (400)
T ss_pred CCCCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe--cccEEEEEEEccCcchHH
Confidence 22233 34455555555556555432 35667777888888888763 321 111 234455565653 23456
Q ss_pred HHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 265 SKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
..+.+.|.+.||.+.+.. .|||+.+
T Consensus 348 ~~~~~~l~~~Gv~v~~~~~~~lRi~~~ 374 (400)
T PTZ00125 348 WDLCLKLKENGLLAKPTHDNIIRFAPP 374 (400)
T ss_pred HHHHHHHHHCCeEEeecCCCEEEEECC
Confidence 667777878899997643 6888755
No 111
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.00 E-value=9.3e-08 Score=94.11 Aligned_cols=226 Identities=13% Similarity=0.090 Sum_probs=132.6
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----- 117 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----- 117 (337)
+|.|.+|+...+. ++..+ ++.+ .+....+++ ++++++++.+. .+.+.||+.||.+++....
T Consensus 58 ~p~v~~ai~~~~~-~~~~~---~~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~~ 123 (396)
T PRK04073 58 HPKIIQALKDQAD-KVTLT---SRAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAYD 123 (396)
T ss_pred CHHHHHHHHHHHh-hcccc---cccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhhh
Confidence 8999999887643 44322 2221 222223444 57778887653 5777899999887766541
Q ss_pred ------Cc----------------------------------------------ccc-----cccEEEEcCccc--cccc
Q psy10669 118 ------PT----------------------------------------------NNA-----RFDFLSSGTTCY--SRCL 138 (337)
Q Consensus 118 ------~~----------------------------------------------~~a-----~pklII~~~S~~--~~~~ 138 (337)
++ .+. ++++||+.+-.. +...
T Consensus 124 ~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~viiep~~~~~G~~~ 203 (396)
T PRK04073 124 VKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPNTAAFLVEPIQGEAGINI 203 (396)
T ss_pred ccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccCeEEEEEcCccCCCCCcc
Confidence 11 000 146777764221 2333
Q ss_pred C----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeeccC--Cc-----hhhh--hHHHHHhhccCC
Q psy10669 139 D----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTKT--GE-----KILY--DYEEKINNAVFP 192 (337)
Q Consensus 139 d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~~--Gg-----~i~~--~l~~~i~~~~~p 192 (337)
| +++|+++|+++|++|++|++|+ .|--+ ++ ....|. || ++++ ++.+.+......
T Consensus 204 ~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~ 283 (396)
T PRK04073 204 PPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHG 283 (396)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCC
Confidence 3 7789999999999999999998 33211 10 111121 12 2222 465655543222
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
..++ .++...++..+++..+.+ ..+.+++.++.++|.+.|++.++..+.. .....++.+++.. +..++.+.|
T Consensus 284 ~t~~-~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~~~---~~~~~~~~l 356 (396)
T PRK04073 284 STFG-GNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVELNE---PARPYCEAL 356 (396)
T ss_pred CCCC-CCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEecc---hHHHHHHHH
Confidence 3333 456666666666655533 2456778888999999998865432221 1234566666642 456777888
Q ss_pred hhcCceeccCc--ccchhhh
Q psy10669 272 EEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 272 ~~~gI~v~~~~--girig~~ 289 (337)
.+.||.+.... .|||..+
T Consensus 357 ~~~Gv~~~~~~~~~iRi~p~ 376 (396)
T PRK04073 357 KEEGLLCKETHETVIRFAPP 376 (396)
T ss_pred HHCCeEEecCCCCEEEEECC
Confidence 88899997533 5788754
No 112
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.00 E-value=7.7e-08 Score=94.52 Aligned_cols=230 Identities=17% Similarity=0.107 Sum_probs=136.6
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--- 119 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--- 119 (337)
+|.+.+++...+. +++ ....+ |. .....+++ ++++++++.+.++ ..+..+||++||.+++..+..+
T Consensus 61 ~p~v~~ai~~~~~-~~~--~~~~~-~~-~~~~~~la----~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~g~~ 129 (398)
T PRK03244 61 HPAVVEAVTRQLA-TLG--HVSNL-FA-TEPQIALA----ERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARLTGRT 129 (398)
T ss_pred CHHHHHHHHHHHH-hcc--CccCc-cC-CHHHHHHH----HHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHHHCCC
Confidence 6999999987644 443 22222 22 22223343 4777888854211 2344467799998887744210
Q ss_pred -----------------------------------------------ccc---cccEEEEcCcc--cccccC----hHHH
Q psy10669 120 -----------------------------------------------NNA---RFDFLSSGTTC--YSRCLD----YARF 143 (337)
Q Consensus 120 -----------------------------------------------~~a---~pklII~~~S~--~~~~~d----~~~l 143 (337)
+.. ++++||+.+.. -+...| +++|
T Consensus 130 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l 209 (398)
T PRK03244 130 KIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAA 209 (398)
T ss_pred eEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHH
Confidence 000 14567775332 133444 7789
Q ss_pred HHHhhhcCCeEEEecccccccc--c--------e----eeeec-------cCCchhhh-hHHHHHhhccCCCCCCCCcHH
Q psy10669 144 RQICDETDSIMFADMSHISGLI--A--------G----VKGVT-------KTGEKILY-DYEEKINNAVFPSLQGGPHNH 201 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~-------~~Gg~i~~-~l~~~i~~~~~p~~~g~~~~~ 201 (337)
+++|+++|++|++|++|+ |+- + + +.+.. +-|+++.. ++.+.+........+ +.++.
T Consensus 210 ~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~-~~~~~ 287 (398)
T PRK03244 210 REITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTF-GGNPV 287 (398)
T ss_pred HHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEEchhhhCCcccEEEEEcHHHHhhccCCCCcCCC-CCCHH
Confidence 999999999999999996 431 1 1 11111 23444443 566666543333334 34555
Q ss_pred HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
..++...++..+.+ .++.+++.+..++|.+.|.+.++.++. ......++.+.+... ....+.+.|.+.||.+.+
T Consensus 288 ~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~--~~~~~~~~l~~~Gv~~~~ 362 (398)
T PRK03244 288 ACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP--VAKAVEAAAREAGFLVNA 362 (398)
T ss_pred HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEecc--HHHHHHHHHHHCCeEEee
Confidence 66666666655532 357888899999999999987664332 112456777777432 456677888888999976
Q ss_pred Cc--ccchhhhh
Q psy10669 281 NT--GISLAAEI 290 (337)
Q Consensus 281 ~~--girig~~~ 290 (337)
.. .|||+.+.
T Consensus 363 ~~~~~iR~~p~~ 374 (398)
T PRK03244 363 VAPDVIRLAPPL 374 (398)
T ss_pred cCCCEEEEECCC
Confidence 43 78887554
No 113
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=98.97 E-value=1.1e-08 Score=101.14 Aligned_cols=198 Identities=18% Similarity=0.178 Sum_probs=123.6
Q ss_pred CCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------
Q psy10669 61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------- 119 (337)
Q Consensus 61 g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------- 119 (337)
|+..+|+ ++...+++| +++++++|+++ ++.+.||+.|+..++.+++++
T Consensus 56 ~~~y~r~--~~p~~~~Le----~~lA~l~G~~~-----~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~ 124 (398)
T PRK07504 56 GFIYSRY--SNPTVDMFE----KRMCALEGAED-----ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETL 124 (398)
T ss_pred CceeecC--CCchHHHHH----HHHHHHhCCCe-----eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHH
Confidence 3444443 455667787 58889999987 456889999988777777654
Q ss_pred -------------------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc-----e---
Q psy10669 120 -------------------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G--- 167 (337)
Q Consensus 120 -------------------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g--- 167 (337)
+.+ ++|+|++...++ +...|+++|.++|+++|++++||++|..|+.. |
T Consensus 125 ~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDi 204 (398)
T PRK07504 125 LPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHI 204 (398)
T ss_pred HhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCE
Confidence 001 268888763333 58899999999999999999999999987754 1
Q ss_pred e-eeecc--------CCchhhh--hH-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q psy10669 168 V-KGVTK--------TGEKILY--DY-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE 235 (337)
Q Consensus 168 ~-~~T~~--------~Gg~i~~--~l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~ 235 (337)
+ .|.+| .||++++ ++ .+.+..... ..|....+..|+++.. .+ .....+.++..+|++.+++.
T Consensus 205 vv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~--~~g~~~s~~~A~~~l~--~L--~tl~~R~~~~~~na~~la~~ 278 (398)
T PRK07504 205 VVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR--HTGPSLSPFNAWTLLK--GL--ETLPVRVRQQTESAAAIADF 278 (398)
T ss_pred EEeeccccccCCccceEEEEEeCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHh--cc--chHHHHHHHHHHHHHHHHHH
Confidence 2 22222 2567765 33 333332111 1233334444444332 22 23567788888999999999
Q ss_pred HHhC-CCE-EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 236 MIKR-GYH-VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 236 L~~~-G~~-v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
|.+. ++. |...+-.+| ++.+++. + +...+.+.++...+..
T Consensus 279 L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~~~~~l~~~~ 335 (398)
T PRK07504 279 LAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK--G-GKEAAFRFLNALKIVR 335 (398)
T ss_pred HHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC--C-CHHHHHHHHHhCCcce
Confidence 9984 453 444443344 5666664 2 3445556666655443
No 114
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=98.97 E-value=1.6e-07 Score=91.09 Aligned_cols=234 Identities=15% Similarity=0.129 Sum_probs=145.2
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
+.-+.|-..+|+. +|.+++++...+. .+ ..++.. . ..+++ +.+++++|++. .+|.+++|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~-~~y~~~-----~--~~~lr----~~ia~~~~~~~----~~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAAD-EL-HRYPDG-----S--GFELK----AALAEKFGVDP----ERIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHH-hh-cCCCCC-----c--HHHHH----HHHHHHhCcCH----HHEEEcCCHH
Confidence 3456666666775 8888888876533 21 122211 1 13343 57788999875 3688999965
Q ss_pred -hHHHHHHhhCCc--------------------------------------cc--c---cccEEEEc-Ccc-cccccChH
Q psy10669 108 -ANFAVCEKALPT--------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYA 141 (337)
Q Consensus 108 -AN~~v~~aLl~~--------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~ 141 (337)
+...++.+++++ .+ + ++|+|++. +++ .+...|.+
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 174 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE 174 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence 445555777543 00 1 26777765 322 35888999
Q ss_pred HHHHHhhhc--CCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHhhccCCC
Q psy10669 142 RFRQICDET--DSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 142 ~l~eia~~~--ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~ 193 (337)
++.++++.+ |+++++|++|...... .+.+|. | .| |++++ ++.+.+.....|.
T Consensus 175 ~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~~ 254 (367)
T PRK02731 175 EVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQPF 254 (367)
T ss_pred HHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCCC
Confidence 999998875 8999999998643321 122232 2 23 66665 5666666543332
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
+.+.....++...+.. ....++.+++..++.+.+.+.|.+.|+.+.. .....+++.+.. +.+..++.+.|.+
T Consensus 255 ---~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~g~~~~i~~~~-~~~~~~~~~~L~~ 326 (367)
T PRK02731 255 ---NVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLEYIP--SVGNFILVDFDD-GKDAAEAYQALLK 326 (367)
T ss_pred ---CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CCceEEEEECCC-CCCHHHHHHHHHH
Confidence 2233344333333321 1223566777788888899999988987764 456788888743 3477888889988
Q ss_pred cCceeccCc------ccchhh
Q psy10669 274 IAIACNKNT------GISLAA 288 (337)
Q Consensus 274 ~gI~v~~~~------girig~ 288 (337)
.||.+.... .|||+.
T Consensus 327 ~gI~v~~~~~~~~~~~iRis~ 347 (367)
T PRK02731 327 RGVIVRPVAGYGLPNALRITI 347 (367)
T ss_pred CCEEEEeCCCCCCCCeEEEec
Confidence 999997632 467653
No 115
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=98.95 E-value=1.8e-07 Score=90.12 Aligned_cols=228 Identities=20% Similarity=0.192 Sum_probs=145.4
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
+..|.|-..+|.. +|.+++++...+.... ..+|.. | ..+ .|+.++++++.+. -+|.+++| +
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~---~~~----lr~aia~~~~~~~----~~I~it~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----N---ADA----LRQAIAAYYGLDP----EQVFVGNGSD 87 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----c---HHH----HHHHHHHHhCCCH----HHEEEcCCHH
Confidence 3568888888876 6889999876543211 112211 1 122 3568889999876 36888898 5
Q ss_pred hhHHHHHHhhCCc---------------------------------------cccc-cc-EEEEcCcc-cccccChHHHH
Q psy10669 107 PANFAVCEKALPT---------------------------------------NNAR-FD-FLSSGTTC-YSRCLDYARFR 144 (337)
Q Consensus 107 ~AN~~v~~aLl~~---------------------------------------~~a~-pk-lII~~~S~-~~~~~d~~~l~ 144 (337)
++...++.+++++ .+.+ .+ ++++++.+ .+...+.+++.
T Consensus 88 ~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~ 167 (353)
T PRK05387 88 EVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLRPNGGIIFPNPNAPTGIALPLAEIE 167 (353)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHhcCCEEEEeCCCCCCCCCCCHHHHH
Confidence 6777777888654 0001 34 44445544 46899999999
Q ss_pred HHhhhc-CCeEEEeccccc--c-----ccc-----eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHH
Q psy10669 145 QICDET-DSIMFADMSHIS--G-----LIA-----GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNH 201 (337)
Q Consensus 145 eia~~~-ga~l~vD~AH~~--G-----li~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~ 201 (337)
+|+++. ++++++|++|.- | ++. .+++|. | .| |+++. ++.+.+.....+....+.+.+
T Consensus 168 ~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 247 (353)
T PRK05387 168 RILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRL 247 (353)
T ss_pred HHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHH
Confidence 999876 999999999841 0 110 123333 2 13 77665 566666543222122345556
Q ss_pred HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
..+++..++.. ...+++.++++.++.+++.+.|.+.|+++.. ..+..+++.+. +.+..++.+.|.+.||.+.
T Consensus 248 ~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~ 319 (353)
T PRK05387 248 AQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLP--SKANFVFARHP--SHDAAELAAKLRERGIIVR 319 (353)
T ss_pred HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECC--CcCcEEEEECC--CCCHHHHHHHHHHCCEEEE
Confidence 66555555532 1235677889999999999999999998754 34556666654 3467788888988899985
No 116
>PRK03321 putative aminotransferase; Provisional
Probab=98.92 E-value=2.4e-07 Score=89.46 Aligned_cols=231 Identities=13% Similarity=0.142 Sum_probs=143.1
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~ 107 (337)
.-|.|-..++.. +|.+.+++...+.. . ..++.. | .+++ ++.+++++|+++ .+|.+++|+ +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~----g---~~~l----r~~ia~~~~~~~----~~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPDM----G---AVEL----RAALAEHLGVPP----EHVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCCC----c---HHHH----HHHHHHHhCcCH----HHEEECCCHHH
Confidence 346666565544 77899998765432 1 223211 2 2333 367789999875 368889996 4
Q ss_pred hHHHHHHhhCCc-----------------------------------------cc---ccccEEEEcCccc--ccccChH
Q psy10669 108 ANFAVCEKALPT-----------------------------------------NN---ARFDFLSSGTTCY--SRCLDYA 141 (337)
Q Consensus 108 AN~~v~~aLl~~-----------------------------------------~~---a~pklII~~~S~~--~~~~d~~ 141 (337)
++..++.+++++ +. .+++++++....+ +...|.+
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 165 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPA 165 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHH
Confidence 566666776543 00 1267777653333 5888999
Q ss_pred HHHHHhhh--cCCeEEEeccccccccc----------------eeeeec-c-------CCchhhh--hHHHHHhhccCCC
Q psy10669 142 RFRQICDE--TDSIMFADMSHISGLIA----------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 142 ~l~eia~~--~ga~l~vD~AH~~Gli~----------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~ 193 (337)
++.++|++ +|+++++|+++.--... .+.+|. | +-|++++ ++.+.+.....+.
T Consensus 166 ~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~ 245 (352)
T PRK03321 166 ELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPF 245 (352)
T ss_pred HHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCC
Confidence 99999987 59999999998521111 122232 2 1267765 5666666543222
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
+.+.....+...++.. ...+.+..+++.++-+.+.+.|.+.|+.+.. .+...+++.++. +..++.+.|.+
T Consensus 246 ---~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~--~~g~~i~i~l~~---~~~~~~~~l~~ 315 (352)
T PRK03321 246 ---SVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPP--SQANFVWLPLGE---RTADFAAAAAE 315 (352)
T ss_pred ---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CCCCEEEEeCCC---CHHHHHHHHHH
Confidence 3344444444444432 2345666677777778899999988887654 344557777743 46678888888
Q ss_pred cCceeccCc--ccchhh
Q psy10669 274 IAIACNKNT--GISLAA 288 (337)
Q Consensus 274 ~gI~v~~~~--girig~ 288 (337)
+||.+.... +|||+.
T Consensus 316 ~gI~v~~~~~~~iRi~~ 332 (352)
T PRK03321 316 AGVVVRPFAGEGVRVTI 332 (352)
T ss_pred CCEEEEccCCCcEEEee
Confidence 999998643 788874
No 117
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.92 E-value=1.3e-07 Score=91.91 Aligned_cols=227 Identities=16% Similarity=0.112 Sum_probs=139.7
Q ss_pred CCCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669 39 ENFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK 115 (337)
Q Consensus 39 en~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a 115 (337)
+|++ +|.|.+++...+. ++. ..+++ |. .....++| ++++++||.+. .+.+.||+.||..++.+
T Consensus 38 ~~~lG~~~p~v~~a~~~~~~-~~~--~~~~~-~~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg~~a~~~a~~~ 103 (379)
T TIGR00707 38 VNSLGHAHPKLVEALKEQLE-KLV--HVSNL-YY-TEPQEELA----EKLVEHSGADR-----VFFCNSGAEANEAALKL 103 (379)
T ss_pred hccCCCCCHHHHHHHHHHHh-hcc--ccccc-cC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHH
Confidence 6766 6999999987644 332 22222 32 23345555 58889999874 57778889999877774
Q ss_pred hC---------Cc---------------------------------------------cc--c---cccEEEEcCccccc
Q psy10669 116 AL---------PT---------------------------------------------NN--A---RFDFLSSGTTCYSR 136 (337)
Q Consensus 116 Ll---------~~---------------------------------------------~~--a---~pklII~~~S~~~~ 136 (337)
+. ++ .+ . ++++|++.+ ++++
T Consensus 104 ~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p-~~~~ 182 (379)
T TIGR00707 104 ARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEP-IQGE 182 (379)
T ss_pred HHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEc-cccC
Confidence 41 11 00 0 157888864 3443
Q ss_pred c----cC---hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c------CCchhhh--hHHHHHh
Q psy10669 137 C----LD---YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K------TGEKILY--DYEEKIN 187 (337)
Q Consensus 137 ~----~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~------~Gg~i~~--~l~~~i~ 187 (337)
. .+ +++|.++|+++|+++++|++|. |+.. | + ..|. | ..|+++. ++.+.+.
T Consensus 183 ~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~riG~~~~~~~~~~~~~ 261 (379)
T TIGR00707 183 GGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFT 261 (379)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEEEEcccccCCcccEEEEEcHHHHhhhc
Confidence 2 23 5678899999999999999996 3311 1 0 1121 2 1244443 5666665
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC--CCCCeEEEEEecCCCcchH
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG--GTDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~--~t~~h~v~V~~~~~~~~~~ 265 (337)
.......+ +.++...++...++..+.. .++.+++.++.++++++|.+.+.+.... ...+.++++.+.+ +..
T Consensus 262 ~~~~~~~~-~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~---~~~ 334 (379)
T TIGR00707 262 PGDHGSTF-GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA---PCK 334 (379)
T ss_pred CCCCCCCC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC---cHH
Confidence 43222223 3566777777777766532 4678889999999999988754433110 1234456666653 357
Q ss_pred HHHHHHhhcCceeccCc--ccchhh
Q psy10669 266 KVELVLEEIAIACNKNT--GISLAA 288 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~~~--girig~ 288 (337)
++.+.|.+.||.+.+.. .+||+.
T Consensus 335 ~~~~~l~~~Gv~v~~~~~~~lRi~~ 359 (379)
T TIGR00707 335 DIVKKALEKGLLVNCAGPKVLRFLP 359 (379)
T ss_pred HHHHHHHHCCcEEeeCCCCEEEEEC
Confidence 78888998999998643 678764
No 118
>PRK04311 selenocysteine synthase; Provisional
Probab=98.91 E-value=1.7e-07 Score=94.28 Aligned_cols=219 Identities=13% Similarity=0.083 Sum_probs=133.5
Q ss_pred CCCCHHHHHHHhhhhhhccCCCCCCCcCcCc--cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC
Q psy10669 40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGG--NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL 117 (337)
Q Consensus 40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G--~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl 117 (337)
..+++.|.+++...+. .|. +....+..| ...++.+| +++++++|+++ .+.++||+.|+..++.++.
T Consensus 96 s~l~~~v~eav~~~~~-~~~--~le~~l~~g~~g~r~~~~e----~~lA~l~Gae~-----a~vv~sgtaAl~l~l~~l~ 163 (464)
T PRK04311 96 ALLSEAAIEAVTEAAR-GYS--NLEYDLATGKRGSRDRALA----ALLCALTGAED-----ALVVNNNAAAVLLALNALA 163 (464)
T ss_pred CCCCHHHHHHHHHHHh-ccc--ccccchhhcccchHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhC
Confidence 4569999999986643 343 111111111 12234555 68899999986 6888999999887777763
Q ss_pred Cc--------------------------------------------ccc---cccEEEEc-Ccccc-----cccChHHHH
Q psy10669 118 PT--------------------------------------------NNA---RFDFLSSG-TTCYS-----RCLDYARFR 144 (337)
Q Consensus 118 ~~--------------------------------------------~~a---~pklII~~-~S~~~-----~~~d~~~l~ 144 (337)
+. +.+ ++++|++. .|+|. ...|+++|.
T Consensus 164 ~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~ 243 (464)
T PRK04311 164 AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELA 243 (464)
T ss_pred CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHH
Confidence 21 111 25666655 66653 456999999
Q ss_pred HHhhhcCCeEEEecccc-------ccccc-------------eeeeec------cCCchhhh--hHHHHHhhc--cCCCC
Q psy10669 145 QICDETDSIMFADMSHI-------SGLIA-------------GVKGVT------KTGEKILY--DYEEKINNA--VFPSL 194 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~-------~Gli~-------------g~~~T~------~~Gg~i~~--~l~~~i~~~--~~p~~ 194 (337)
++|+++|+++++|.+++ .|+.. .+++++ |++|++++ ++.+++.+. .+...
T Consensus 244 ~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~~r~lr 323 (464)
T PRK04311 244 ALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPLKRALR 323 (464)
T ss_pred HHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchhHHHHh
Confidence 99999999999999632 11111 133443 45687765 566655521 11111
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHH------------HHHHHHHHHHHHHHHHhC---CC--EEec------CCCC--
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSY------------QAQVKANASHLSDEMIKR---GY--HVVT------GGTD-- 249 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y------------~~~v~~na~~l~~~L~~~---G~--~v~~------~~t~-- 249 (337)
..--.++++...+.....+ ++.+ .++..+||+.+++.|... ++ .|.. ||+.
T Consensus 324 ---~dk~~l~~l~~~l~~~~~~-~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~ 399 (464)
T PRK04311 324 ---VDKLTLAALEATLRLYLDP-EKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPV 399 (464)
T ss_pred ---cchHHHHHHHHHHHHHhCh-hhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcC
Confidence 1124566666666544332 1222 378888999999999875 33 3442 3333
Q ss_pred --CeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 250 --VHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 250 --~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
=+-..|.+...+.+..++.+.|.+.
T Consensus 400 ~~~~~~~v~~~~~~~~~~~l~~~lr~~ 426 (464)
T PRK04311 400 DRLPSAAVTLTPKDRSLEALAARLRLL 426 (464)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHhcC
Confidence 2445566666677889999999874
No 119
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=98.91 E-value=2.9e-07 Score=88.97 Aligned_cols=220 Identities=15% Similarity=0.119 Sum_probs=128.4
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCc-
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGS- 106 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt- 106 (337)
.-|+|-..+|+. +|.+.+++...+. .+ .+++.. ...++ ++.+++++|+++ .++.+ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~y~~~-------~~~~l----r~~ia~~~~~~~----~~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELS-KI-HRYPEP-------DAPEL----REALSKYTGVPV----ENIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHH-hh-cCCCCC-------CHHHH----HHHHHHHhCCCH----HHEEEeCCCHH
Confidence 447777777876 6888888865433 21 122211 11334 467788999876 35777 7885
Q ss_pred hhHHHHHHhhCCc---------------------------------------cc--c---cccEEEEc-Ccc-cccccCh
Q psy10669 107 PANFAVCEKALPT---------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDY 140 (337)
Q Consensus 107 ~AN~~v~~aLl~~---------------------------------------~~--a---~pklII~~-~S~-~~~~~d~ 140 (337)
+++..++.+++++ .+ + ++++|++. +++ .+...|.
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 177 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE 177 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence 5565666776543 01 0 26777764 333 3588899
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~ 197 (337)
+++.++|+++|+++++|++|.- +.. .+.+|. | .| |++++ ++.+.+.....+. +
T Consensus 178 ~~l~~l~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~---~ 253 (361)
T PRK00950 178 EDIRKILESTDALVFVDEAYVE-FAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF---S 253 (361)
T ss_pred HHHHHHHHHCCcEEEEECchhh-hCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCC---C
Confidence 9999999999999999999952 222 122332 2 23 66665 4666555443332 1
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
.+.+..+++..++.. ....++.++++.++.++|.+.| ++++.. +.+..+++++ .+.+..++.+.|.+.||.
T Consensus 254 ~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l---~~~~~~--~~~~~i~~~~--~~~~~~~~~~~l~~~gv~ 324 (361)
T PRK00950 254 LTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNEL---PFKVYP--SEANFVLVDV--TPMTAKEFCEELLKRGVI 324 (361)
T ss_pred CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhc---CeeECC--CcceEEEEEC--CCCCHHHHHHHHHHCCEE
Confidence 333444443333321 1112333344444444444444 355543 4556777877 345788888899888999
Q ss_pred ecc
Q psy10669 278 CNK 280 (337)
Q Consensus 278 v~~ 280 (337)
+.+
T Consensus 325 v~~ 327 (361)
T PRK00950 325 VRD 327 (361)
T ss_pred Eee
Confidence 875
No 120
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=98.91 E-value=3e-08 Score=97.34 Aligned_cols=186 Identities=13% Similarity=0.117 Sum_probs=116.7
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCE 114 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~ 114 (337)
+..|..|..+...++.... ..+. .++..+|+ ++...+++| +++++++|+++ .+.+.||+.|+.+++.
T Consensus 21 i~~~~~~~~~~~~~~~~~~-~~~~-~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~~~~~sG~~Ai~~al~ 87 (380)
T TIGR01325 21 LFLTSSFVYDSAAHAADRF-AGEI-PGFVYSRY--ANPTVAAFE----ERIAALEGAER-----AVATATGMSAIQAALM 87 (380)
T ss_pred eeCCcceecCCHHHHHHhh-cccc-CCcceecC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH
Confidence 4445555544444443321 1121 23334444 345567787 58889999975 5778999999999888
Q ss_pred hhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhh
Q psy10669 115 KALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDE 149 (337)
Q Consensus 115 aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~ 149 (337)
+++++ +.+ ++|+|++. .++ .+...|+++|.++|++
T Consensus 88 al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~ 167 (380)
T TIGR01325 88 TLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHA 167 (380)
T ss_pred HHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHH
Confidence 88654 111 26888876 333 3578899999999999
Q ss_pred cCCeEEEeccccccccc--------eee-eecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHH
Q psy10669 150 TDSIMFADMSHISGLIA--------GVK-GVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAM 210 (337)
Q Consensus 150 ~ga~l~vD~AH~~Gli~--------g~~-~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~ 210 (337)
+|++++||++|..++.. .++ +.+| .||++++ ++.+.+.....+ .|+...+..|.+ ++
T Consensus 168 ~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~--~g~~~~p~~a~~--~l 243 (380)
T TIGR01325 168 IGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRH--TGPAMSPFNAWV--LL 243 (380)
T ss_pred cCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHh--hCCCCCHHHHHH--HH
Confidence 99999999999876543 122 2223 1466665 455555443222 233333333322 22
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 211 LQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 211 ~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
..+ ...+.+.++..+|++.+++.|.+.
T Consensus 244 ~~l--~tl~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 244 KGL--ETLSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred hcc--CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 233 245678899999999999999985
No 121
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.89 E-value=6.5e-08 Score=104.48 Aligned_cols=201 Identities=14% Similarity=0.116 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch---hHHHHHHhhCCc--------------------------------
Q psy10669 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP---ANFAVCEKALPT-------------------------------- 119 (337)
Q Consensus 75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~---AN~~v~~aLl~~-------------------------------- 119 (337)
.++...+++.++++||++. +.+++.+|.+ |++.++.+++++
T Consensus 567 ~~~~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 567 QEMFEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 3556678899999999976 6677777743 666667777522
Q ss_pred ---------------c-cc----cccEEEEc-Ccccc-cccChHHHHHHhhhcCCeEEEeccccccccc----------e
Q psy10669 120 ---------------N-NA----RFDFLSSG-TTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----------G 167 (337)
Q Consensus 120 ---------------~-~a----~pklII~~-~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------g 167 (337)
+ +. ++++|+++ +|+++ ...|+++|.++|+++|++++||.||..|+++ .
T Consensus 643 v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~ 722 (993)
T PLN02414 643 VGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADV 722 (993)
T ss_pred eccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCE
Confidence 0 00 13566666 66665 7778999999999999999999999988855 1
Q ss_pred eeeeccC--------C----chhhh--hHHHHHhh------ccC-----CCCCCCCcH---H--HHHHHHHHHHHHhc-h
Q psy10669 168 VKGVTKT--------G----EKILY--DYEEKINN------AVF-----PSLQGGPHN---H--AIGAIATAMLQAQS-D 216 (337)
Q Consensus 168 ~~~T~~~--------G----g~i~~--~l~~~i~~------~~~-----p~~~g~~~~---~--~iaala~a~~e~~~-~ 216 (337)
+++++|| | |++.. .+...+-. .-| +.-.|+.+. + .++-.+.+...++- .
T Consensus 723 ~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~ 802 (993)
T PLN02414 723 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSE 802 (993)
T ss_pred EEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHh
Confidence 3343322 1 44432 23332210 000 000233221 1 22222233323322 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCEEecCC---CCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGG---TDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 217 ~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~---t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~ 280 (337)
..++-.++.+.|++|++++|.+ ++.+...+ .--|-..++++. .+.+..++.++|.++||....
T Consensus 803 Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt 872 (993)
T PLN02414 803 GLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPT 872 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEee
Confidence 3456688999999999999987 67665422 223567777762 246678899999999997653
No 122
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.88 E-value=2.7e-07 Score=91.04 Aligned_cols=154 Identities=10% Similarity=0.097 Sum_probs=90.4
Q ss_pred cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEeccccccccc--e---------e---eee-cc--CCch---
Q psy10669 125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHISGLIA--G---------V---KGV-TK--TGEK--- 177 (337)
Q Consensus 125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~---~~T-~~--~Gg~--- 177 (337)
.+||+. ..+++.++ +++++++|+++|++|++|+.|+ |+ + | + ..| +| .||+
T Consensus 181 aavi~E-pv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~-GRtG~~~a~~~~gv~PDi~t~gK~lg~G~p~~ 257 (395)
T PRK03715 181 VAVMLE-PVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GC-GRTGTLFAYELSGIEPDIMTLGKGIGGGVPLA 257 (395)
T ss_pred eEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CC-CCCcchhhHhhcCCCCceeeehhhhhCCcceE
Confidence 456665 36655333 6788899999999999999998 64 3 1 1 112 12 1332
Q ss_pred --hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCCC
Q psy10669 178 --ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGGTDV 250 (337)
Q Consensus 178 --i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~t~~ 250 (337)
+.. ++.. ..+.....+++ .|+...|+...++..+.+ ++..+++.++.++|.++|++. ++.-+. ...
T Consensus 258 av~~~~~i~~-~~~~~~~~T~~-g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr--G~G 330 (395)
T PRK03715 258 ALLAKAEVAV-FEAGDQGGTYN-GNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGER--GEG 330 (395)
T ss_pred EEEEcccccc-ccCCCcCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE--cce
Confidence 222 3421 11111122232 455555555555655532 467899999999999999863 543232 467
Q ss_pred eEEEEEecCCCcchHHHHHHHhhc---CceeccCc--ccchhhhh
Q psy10669 251 HLILIDLRKNKLTGSKVELVLEEI---AIACNKNT--GISLAAEI 290 (337)
Q Consensus 251 h~v~V~~~~~~~~~~~~~~~L~~~---gI~v~~~~--girig~~~ 290 (337)
+++.|.+.+. .+..+.+.+.+. ||.++... .|||..+.
T Consensus 331 lm~~i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l 373 (395)
T PRK03715 331 LLRALLLGKD--IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPAL 373 (395)
T ss_pred eEEEEEecCc--hHHHHHHHHHhccCCCEEEeecCCCEEEEeCCc
Confidence 8888988653 223333444444 99987543 67776543
No 123
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.88 E-value=5.6e-07 Score=88.23 Aligned_cols=224 Identities=13% Similarity=0.090 Sum_probs=128.5
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh------
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA------ 116 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL------ 116 (337)
+|.|.+|+...+.+-+.. +. .+ .+....+++ ++++++++.+. .+.+.||+.||..++.++
T Consensus 49 ~p~v~~a~~~~~~~~~~~---~~-~~-~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~~ 114 (389)
T PRK01278 49 HPHLVEALKEQAEKLWHV---SN-LY-RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHYG 114 (389)
T ss_pred CHHHHHHHHHHHHhcCcc---cc-cc-CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHHh
Confidence 999999998775532211 11 11 223333444 57777776543 466688899998887765
Q ss_pred ---CCc------------------------------------------------cc---ccccEEEEcCccccccc----
Q psy10669 117 ---LPT------------------------------------------------NN---ARFDFLSSGTTCYSRCL---- 138 (337)
Q Consensus 117 ---l~~------------------------------------------------~~---a~pklII~~~S~~~~~~---- 138 (337)
.++ +. .++++||+.+ +++..+
T Consensus 115 ~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep-~~~~~G~~~~ 193 (389)
T PRK01278 115 KGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEP-IQGEGGIRPA 193 (389)
T ss_pred cCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEec-ccCCCCCcCC
Confidence 111 00 0146788874 454433
Q ss_pred ---ChHHHHHHhhhcCCeEEEecccccccc--c--------ee---eeec-c-------CCchhhh-hHHHHHhhccCCC
Q psy10669 139 ---DYARFRQICDETDSIMFADMSHISGLI--A--------GV---KGVT-K-------TGEKILY-DYEEKINNAVFPS 193 (337)
Q Consensus 139 ---d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g~---~~T~-~-------~Gg~i~~-~l~~~i~~~~~p~ 193 (337)
++++|+++|+++|++|++|+.|. |+- + ++ ..|. | -|+++.. ++.+.+.......
T Consensus 194 ~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~ 272 (389)
T PRK01278 194 PDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIMAVAKGIGGGFPLGACLATEEAAKGMTPGTHGS 272 (389)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEEEEehhccCCcceEEEEEcHHHHhccCCCCCCC
Confidence 67789999999999999999997 431 1 10 1111 2 1222222 4555555433333
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-EecC-CCCCeEEEEEecCCCcchHHHHH
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVTG-GTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~~-~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
++ +.++...++...++..+.+ .++.+++.++.++++++|++. .+. +... ....-++.+.+.. +..++.+
T Consensus 273 t~-~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~---~~~~~~~ 345 (389)
T PRK01278 273 TY-GGNPLAMAVGNAVLDVILA---PGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV---PNRDLVQ 345 (389)
T ss_pred CC-CccHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec---CHHHHHH
Confidence 34 3566666666666766532 356778888888888888762 121 2210 0122333444432 4566777
Q ss_pred HHhhcCceeccCc--ccchhhh
Q psy10669 270 VLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 270 ~L~~~gI~v~~~~--girig~~ 289 (337)
.|.+.||.+.+.. .|||+.+
T Consensus 346 ~l~~~GV~~~p~~~~~lR~~p~ 367 (389)
T PRK01278 346 ALRDEGLLTVGAGDNVVRLLPP 367 (389)
T ss_pred HHHHCCeEEeecCCCEEEEeCC
Confidence 7777799987543 6787754
No 124
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=98.88 E-value=3e-07 Score=92.21 Aligned_cols=218 Identities=16% Similarity=0.187 Sum_probs=130.5
Q ss_pred CCCHHHHHHHhhhhhhccCCCCCCCcCcCc--cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC
Q psy10669 41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGG--NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP 118 (337)
Q Consensus 41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G--~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~ 118 (337)
.+|+.|.+++...+. .|+ +....+-.| ...++.+| +++++++|+++ ++.++||+.|+..++.++.+
T Consensus 92 ~l~~~vieAv~~~~~-~y~--~l~~~l~~g~~g~r~~~le----~~lA~l~gae~-----alvv~sg~aAi~l~l~~l~~ 159 (454)
T TIGR00474 92 PLAEEAIEAVTDAAR-GYS--NLEYDLETGKRGSRYSHVE----GLLCELTGAED-----ALVVNNNAAAVLLALNTLAK 159 (454)
T ss_pred CCCHHHHHHHHHHHh-ccc--chhccccccccchHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCC
Confidence 459999999986644 443 211111011 12245555 68899999986 57789999998888777632
Q ss_pred c--------------------------------------------ccc---cccEEEE-cCccccc-----ccChHHHHH
Q psy10669 119 T--------------------------------------------NNA---RFDFLSS-GTTCYSR-----CLDYARFRQ 145 (337)
Q Consensus 119 ~--------------------------------------------~~a---~pklII~-~~S~~~~-----~~d~~~l~e 145 (337)
. +.+ ++++|++ ..|+|++ ..|+++|.+
T Consensus 160 GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~ 239 (454)
T TIGR00474 160 GKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVA 239 (454)
T ss_pred cCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHH
Confidence 1 111 1566554 4677765 569999999
Q ss_pred HhhhcCCeEEEecccccccc---------c-------------eeeeec------cCCchhhh--hHHHHHhhccCCCCC
Q psy10669 146 ICDETDSIMFADMSHISGLI---------A-------------GVKGVT------KTGEKILY--DYEEKINNAVFPSLQ 195 (337)
Q Consensus 146 ia~~~ga~l~vD~AH~~Gli---------~-------------g~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~~ 195 (337)
+|+++|++++||.+ +|++ . .+++++ |.||++++ ++.+++.+. |...
T Consensus 240 la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~~--~l~r 315 (454)
T TIGR00474 240 LGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKKN--PLTR 315 (454)
T ss_pred HHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhhc--hhHH
Confidence 99999999999975 3332 1 133332 45787765 454444321 1100
Q ss_pred -CCCcHHHHHHHHHHHHHHhchhhHHH------------HHHHHHHHHHHHHHHHh---CCCE--Eec------CCC---
Q psy10669 196 -GGPHNHAIGAIATAMLQAQSDEFKSY------------QAQVKANASHLSDEMIK---RGYH--VVT------GGT--- 248 (337)
Q Consensus 196 -g~~~~~~iaala~a~~e~~~~~~~~y------------~~~v~~na~~l~~~L~~---~G~~--v~~------~~t--- 248 (337)
=-..--.+|++...+...+.+. ..+ .++..+||+.+++.|.+ .|+. |.. ||+
T Consensus 316 ~lr~~k~~la~l~~~l~~~~~~~-~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~ 394 (454)
T TIGR00474 316 ALRVDKLTLAALEATLRLYLDPE-KALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPD 394 (454)
T ss_pred HHhhChHHHHHHHHHHHHHhCch-hhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcC
Confidence 0011124455555555544332 222 34788899999999987 4443 332 222
Q ss_pred -CCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 249 -DVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 249 -~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
.=+-..|.+...+.+..++.++|.+..
T Consensus 395 ~~l~~~~v~~~~~~~~~~~l~~~lr~~~ 422 (454)
T TIGR00474 395 ERLPSYAVTLTPDGLSAEKLEARLRELP 422 (454)
T ss_pred CCCCeEEEEEecCCCCHHHHHHHHhcCC
Confidence 123445556666778889999999754
No 125
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=98.87 E-value=3.6e-08 Score=97.02 Aligned_cols=155 Identities=15% Similarity=0.098 Sum_probs=104.3
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++....++| +++++++|.++ .+.++||+.|+..++.+++++
T Consensus 51 ~np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~ 121 (385)
T PRK08574 51 ENPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVL 121 (385)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEE
Confidence 456678888 58899999875 588899999999888888754
Q ss_pred ----------cc-c-cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eecc---
Q psy10669 120 ----------NN-A-RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVTK--- 173 (337)
Q Consensus 120 ----------~~-a-~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~~--- 173 (337)
.+ . ++|+|++....+ +...|+++|.++|+++|+++++|++|..|+.. | ++ |.+|
T Consensus 122 ~~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~ 201 (385)
T PRK08574 122 AYPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIA 201 (385)
T ss_pred ECCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeec
Confidence 00 1 257888753233 36789999999999999999999999988753 1 22 2222
Q ss_pred -----CCc-hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 -----TGE-KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 -----~Gg-~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.|| ++.. ++.+++..... ..|+...+..|+++. ..+ .....+.++..+|++++++.|.+.
T Consensus 202 g~~d~~gG~vi~~~~~~~~~~~~~~~--~~g~~~~p~~a~l~l--~~l--~tL~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 202 GHNDVVGGVAVAWSGEFLEELWEWRR--RLGTIMQPFEAYLVL--RGL--KTLEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred CCCCceeEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHH--ccc--CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 256 4443 45554442211 133444444444333 233 235678888899999999999874
No 126
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.87 E-value=2.9e-07 Score=92.43 Aligned_cols=264 Identities=17% Similarity=0.136 Sum_probs=159.2
Q ss_pred hhhhcHHHHHHHH-HHHhh--cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHh
Q psy10669 11 LAQTDPELYSLIK-KEKHR--QINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLK 87 (337)
Q Consensus 11 l~~~d~~~~~~~~-~e~~r--q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~ 87 (337)
.....+++..++. .+... +........++-++++.+.+++.+.+... .+.++. |. ...++|..+-.-+++
T Consensus 40 ~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~n--l~d~~~--~p---~a~~~E~~~v~~l~~ 112 (460)
T COG0076 40 LEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKN--LGDPDE--SP---AAAELEERVVNMLSD 112 (460)
T ss_pred hhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhc--CCCccc--Ch---hHHHHHHHHHHHHHH
Confidence 4555666666633 22222 22334455566666777778777654432 233222 11 345788888889999
Q ss_pred hcCCCCCCCcceeecCCCchhHHHHHHhh---------C-------Cc--------------------------------
Q psy10669 88 AFNLDPEQWGCNVQPYSGSPANFAVCEKA---------L-------PT-------------------------------- 119 (337)
Q Consensus 88 lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL---------l-------~~-------------------------------- 119 (337)
++|++..-+ -+...+||.||+..+.+. . .|
T Consensus 113 l~~~~~~~~--G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~ 190 (460)
T COG0076 113 LLGAPEEAS--GTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD 190 (460)
T ss_pred HhCCCCCCc--eEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc
Confidence 999964322 244445599987444443 0 01
Q ss_pred ------ccc----c---ccEEEE--cCcccccccChHHHHHHhhhcCCeEEEeccccccccc-------------ee---
Q psy10669 120 ------NNA----R---FDFLSS--GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------------GV--- 168 (337)
Q Consensus 120 ------~~a----~---pklII~--~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~--- 168 (337)
.+. + ...||. |.+.++..-|+++|.+||+++|++++||+|-+..++. ++
T Consensus 191 ~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSI 270 (460)
T COG0076 191 YRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSI 270 (460)
T ss_pred cccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEE
Confidence 000 1 212443 3445678899999999999999999999995544443 11
Q ss_pred -eeecc-----C-Cchhhh-h---HHHHHh--hccCCC-------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Q psy10669 169 -KGVTK-----T-GEKILY-D---YEEKIN--NAVFPS-------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN 228 (337)
Q Consensus 169 -~~T~~-----~-Gg~i~~-~---l~~~i~--~~~~p~-------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n 228 (337)
+..|| . .|.++. | +.+.+. ....|+ +.|+...-..++.-..++.+-.++|++..++.+++
T Consensus 271 t~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~ 350 (460)
T COG0076 271 TVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLEL 350 (460)
T ss_pred EECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHH
Confidence 22333 1 355543 2 433222 111221 12444444677777778887668899999999999
Q ss_pred HHHHHHHHHhCC-CEEecCCCCCeEEEEEecCCCc-c-hHHHHHHHhhcCceeccCc---ccch
Q psy10669 229 ASHLSDEMIKRG-YHVVTGGTDVHLILIDLRKNKL-T-GSKVELVLEEIAIACNKNT---GISL 286 (337)
Q Consensus 229 a~~l~~~L~~~G-~~v~~~~t~~h~v~V~~~~~~~-~-~~~~~~~L~~~gI~v~~~~---giri 286 (337)
+++|+++|.+.| |+++. +.++.+|.++.... + ..+....+++.|..+.... |+++
T Consensus 351 a~~la~~l~~~~~~e~~~---~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~~~~~~~~~~ 411 (460)
T COG0076 351 ARYLAEELEKLGDFELVN---EPELPIVAFRLKDDEDTLADLSERLDRRGWQVPAQLLPKGLAI 411 (460)
T ss_pred HHHHHHHHHhCCCcEeec---CCccceEEEEcCCcccchhchHHHHHhcCceeecccCCcccee
Confidence 999999999987 99986 44666666665331 1 4555666766677766433 5554
No 127
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.87 E-value=1.4e-07 Score=91.96 Aligned_cols=237 Identities=12% Similarity=0.033 Sum_probs=142.1
Q ss_pred ccceeeeccCC---CC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 30 INGIELIASEN---FT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 30 ~~~i~l~asen---~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
.+.+.-+.|++ ++ +|.|.+++...+.+ +. ..+..+ ..+++....+++.+.++.+. .+.++
T Consensus 28 G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~-~~--~~~~~~------~~~~~~~la~~l~~~~~~~~-----~~~~~ 93 (377)
T PRK02936 28 GKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDD-IW--HVSNLF------TNSLQEEVASLLAENSAGDL-----VFFCN 93 (377)
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHh-cc--cccccc------CCHHHHHHHHHHHhcCCCCE-----EEEeC
Confidence 34455556665 44 89999999877553 21 111111 12344333356666666442 46678
Q ss_pred CCchhHHHHHHhhC---Cc----------------------------------------------ccc-----cccEEEE
Q psy10669 104 SGSPANFAVCEKAL---PT----------------------------------------------NNA-----RFDFLSS 129 (337)
Q Consensus 104 Sgt~AN~~v~~aLl---~~----------------------------------------------~~a-----~pklII~ 129 (337)
||+.||.+++.... ++ .++ ++++||+
T Consensus 94 sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~ 173 (377)
T PRK02936 94 SGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVML 173 (377)
T ss_pred CcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEE
Confidence 99999988877431 11 000 1356666
Q ss_pred cCccccc-------ccChHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c------CCchhhh--
Q psy10669 130 GTTCYSR-------CLDYARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K------TGEKILY-- 180 (337)
Q Consensus 130 ~~S~~~~-------~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~------~Gg~i~~-- 180 (337)
. +..++ +.++++|+++|+++|+++++|+.|. |+-- | + +.|. | .+|++++
T Consensus 174 e-~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~ig~v~~~~ 251 (377)
T PRK02936 174 E-VVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIVTVAKGLGNGIPVGAMIGKK 251 (377)
T ss_pred e-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEEEEcccccCCCccEEEEEcH
Confidence 4 23322 2337788899999999999999994 5421 1 0 1121 2 1344443
Q ss_pred hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEe
Q psy10669 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDL 257 (337)
Q Consensus 181 ~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~ 257 (337)
++.+.+.......++ +.++...++...++..+. .+++.+++.++.++|++.|.+. ++..... .....++++.+
T Consensus 252 ~~~~~~~~~~~~~t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 327 (377)
T PRK02936 252 ELGTAFGPGSHGSTF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIEC 327 (377)
T ss_pred HHHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEe
Confidence 566666543333333 457777777777776653 2467789999999999999873 3433220 12457788887
Q ss_pred cCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 258 RKNKLTGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 258 ~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
.+. ...+.+.|.+.||.+.+.. .|||..+
T Consensus 328 ~~~---~~~~~~~l~~~gv~v~~~g~~~lRi~p~ 358 (377)
T PRK02936 328 TEE---VAPVIEQLREEGLLVLSAGPNVIRLLPP 358 (377)
T ss_pred cch---HHHHHHHHHHCCeEEecCCCCEEEEECC
Confidence 643 5667788888899887543 6787743
No 128
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=98.86 E-value=4.4e-07 Score=90.84 Aligned_cols=193 Identities=17% Similarity=0.172 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC---------Cc------------------------
Q psy10669 73 FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---------PT------------------------ 119 (337)
Q Consensus 73 ~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl---------~~------------------------ 119 (337)
...++| +++++++|.++ .+..+||+.|+..++.+++ ++
T Consensus 64 ~~~~fe----~~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~ 134 (438)
T PRK15407 64 FNDAFE----KKLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLV 134 (438)
T ss_pred hHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCE
Confidence 356777 57889999875 5777889999988887762 22
Q ss_pred ------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-----e-----e
Q psy10669 120 ------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G-----V 168 (337)
Q Consensus 120 ------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g-----~ 168 (337)
+.+ ++|+|++.+ .++.+.|+++|.++|+++|++|++|+||+.|..- | .
T Consensus 135 pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~-~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~ 213 (438)
T PRK15407 135 PVFVDVELPTYNIDASLLEAAVSPKTKAIMIAH-TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIA 213 (438)
T ss_pred EEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeC-CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceE
Confidence 101 268888875 5788899999999999999999999999987643 1 1
Q ss_pred eee-c--c-----CCchhhh---hHHHHHhhccCCCC-----------------------------------CC-CCc-H
Q psy10669 169 KGV-T--K-----TGEKILY---DYEEKINNAVFPSL-----------------------------------QG-GPH-N 200 (337)
Q Consensus 169 ~~T-~--~-----~Gg~i~~---~l~~~i~~~~~p~~-----------------------------------~g-~~~-~ 200 (337)
+++ + | .||++++ ++.+++......+. .| +.. .
T Consensus 214 ~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rms 293 (438)
T PRK15407 214 TLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKIT 293 (438)
T ss_pred EEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCcc
Confidence 111 1 2 3788876 34443221100000 00 111 1
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-C-CEEec--CCCC--CeEEEEEecC-CCcchHHHHHHHhh
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-G-YHVVT--GGTD--VHLILIDLRK-NKLTGSKVELVLEE 273 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G-~~v~~--~~t~--~h~v~V~~~~-~~~~~~~~~~~L~~ 273 (337)
...||+ ++.++ ..+++..++-.+|++++.+.|.+. | +.+.. .++. -|..+|.+.. .+.+-.++.+.|.+
T Consensus 294 el~AAi--g~~qL--~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~ 369 (438)
T PRK15407 294 DMQAAI--GLAQL--EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLEE 369 (438)
T ss_pred HHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHHH
Confidence 223333 33344 346677888889999999999764 3 22221 1121 2466666643 24456788899999
Q ss_pred cCceec
Q psy10669 274 IAIACN 279 (337)
Q Consensus 274 ~gI~v~ 279 (337)
.||.++
T Consensus 370 ~GI~~~ 375 (438)
T PRK15407 370 NKIGTR 375 (438)
T ss_pred CCCCcc
Confidence 999765
No 129
>PRK06225 aspartate aminotransferase; Provisional
Probab=98.86 E-value=1.1e-06 Score=85.77 Aligned_cols=234 Identities=14% Similarity=0.123 Sum_probs=135.5
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
.+.|+|-..+|-+ +|.+.+++...+...... .|...+...++ |+.+++++|.++ .+|.+++| +
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~l----r~~ia~~l~~~~----~~v~~~~g~t 93 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYC------KYPPPEGFPEL----RELILKDLGLDD----DEALITAGAT 93 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCC------CCCCCcchHHH----HHHHHHhcCCCC----CcEEEeCCHH
Confidence 4566676666644 899999988765432111 12211222333 467889999876 36777776 6
Q ss_pred hhHHHHHHhhCCc----------------------------c--------------cc-----cccEEEEc-Ccc-cccc
Q psy10669 107 PANFAVCEKALPT----------------------------N--------------NA-----RFDFLSSG-TTC-YSRC 137 (337)
Q Consensus 107 ~AN~~v~~aLl~~----------------------------~--------------~a-----~pklII~~-~S~-~~~~ 137 (337)
+++..++.+++++ . +. ++++|++. +++ .+..
T Consensus 94 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~ 173 (380)
T PRK06225 94 ESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSS 173 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcC
Confidence 7877777887653 0 00 15676654 433 2344
Q ss_pred c---ChHHHHHHhhhcCCeEEEecccc---cc------ccc---eeeeec-c----CC---chhhh--hHHHHHhhccCC
Q psy10669 138 L---DYARFRQICDETDSIMFADMSHI---SG------LIA---GVKGVT-K----TG---EKILY--DYEEKINNAVFP 192 (337)
Q Consensus 138 ~---d~~~l~eia~~~ga~l~vD~AH~---~G------li~---g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p 192 (337)
. ++++|.++|+++|+++++|+++. .+ +.. .+..|. | .| |+++. ++.+.+......
T Consensus 174 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~ 253 (380)
T PRK06225 174 YTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVIN 253 (380)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhc
Confidence 4 46677788999999999999852 11 100 112221 2 22 66655 565655543221
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
.. +.+....++...++... ....+..++...++.+.+.+.|.+ .|+.+...+.....+++++...+++..++.+.|
T Consensus 254 -~~-~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l 330 (380)
T PRK06225 254 -DL-GTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYL 330 (380)
T ss_pred -cc-CCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHH
Confidence 12 23344444444444332 112234444555677778888887 465432122456677888876667888899999
Q ss_pred hhcCceecc
Q psy10669 272 EEIAIACNK 280 (337)
Q Consensus 272 ~~~gI~v~~ 280 (337)
.+.||.+.+
T Consensus 331 ~~~gi~v~~ 339 (380)
T PRK06225 331 LERKIFVRQ 339 (380)
T ss_pred HHCCEEEcC
Confidence 888999875
No 130
>PRK06108 aspartate aminotransferase; Provisional
Probab=98.86 E-value=2.1e-06 Score=83.58 Aligned_cols=236 Identities=13% Similarity=0.063 Sum_probs=134.5
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg 105 (337)
.+.|+|...++-. ++.+++++...+.+. . ..|.-..-..++.....+.+.+.+| .+. .+|.+++|
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~----~---~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~----~~i~~t~g 92 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADG----E---TFYTHNLGIPELREALARYVSRLHGVATPP----ERIAVTSS 92 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcC----C---CCCCCCCCCHHHHHHHHHHHHHHhCCCcCc----ceEEEeCC
Confidence 3567888777655 788999887654331 1 1122222223333333345666677 443 25666666
Q ss_pred -chhHHHHHHhhCCc--------------------------------c-----c-------c---cccEEEEc-Ccc-cc
Q psy10669 106 -SPANFAVCEKALPT--------------------------------N-----N-------A---RFDFLSSG-TTC-YS 135 (337)
Q Consensus 106 -t~AN~~v~~aLl~~--------------------------------~-----~-------a---~pklII~~-~S~-~~ 135 (337)
+.++..++.+++++ + . + ++++|++. +++ .+
T Consensus 93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG 172 (382)
T PRK06108 93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTG 172 (382)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCC
Confidence 67877777887654 0 0 0 15666664 322 23
Q ss_pred cccC---hHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC---chhhh--hHHH
Q psy10669 136 RCLD---YARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG---EKILY--DYEE 184 (337)
Q Consensus 136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G---g~i~~--~l~~ 184 (337)
...+ +++|.++|+++|+++++|++|.-.... .++.|. | .| |+++. ++.+
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~ 252 (382)
T PRK06108 173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQ 252 (382)
T ss_pred cccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHH
Confidence 4444 456778889999999999997643221 112333 2 13 55554 5666
Q ss_pred HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcc
Q psy10669 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLT 263 (337)
Q Consensus 185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~ 263 (337)
.+.... .....+++....++...++..- ....++.++++.++.+++.+.|.+. |+++..+ ..+..+++.+.... +
T Consensus 253 ~~~~~~-~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p-~~g~~~~~~l~~~~-~ 328 (382)
T PRK06108 253 VLEKLI-EYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAKP-DGAMYAFFRIPGVT-D 328 (382)
T ss_pred HHHHHH-HhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC-CeeEEEEEeCCCCC-C
Confidence 555432 2222334444444444444332 1234677888888888899999875 8877642 22445567775432 5
Q ss_pred hHHHHHHH-hhcCceecc
Q psy10669 264 GSKVELVL-EEIAIACNK 280 (337)
Q Consensus 264 ~~~~~~~L-~~~gI~v~~ 280 (337)
..++.+.| ++.||.+.+
T Consensus 329 ~~~~~~~ll~~~gV~v~p 346 (382)
T PRK06108 329 SLALAKRLVDEAGLGLAP 346 (382)
T ss_pred HHHHHHHHHHhCCEEEeC
Confidence 56666655 678999865
No 131
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.85 E-value=4.8e-07 Score=89.24 Aligned_cols=230 Identities=14% Similarity=0.043 Sum_probs=135.0
Q ss_pred CCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669 40 NFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA 116 (337)
Q Consensus 40 n~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL 116 (337)
+++ +|.|.+++...+.+ +. + . +.+..++...+++ ++++++++.+. ...++||+.||.+++...
T Consensus 52 ~~lGh~~p~v~~a~~~~~~~-~~-~-~--~~~~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~kla 117 (403)
T PRK05093 52 TALGHCHPALVKALKEQGEK-LW-H-I--SNVFTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLA 117 (403)
T ss_pred ccCCCCCHHHHHHHHHHHHh-cC-c-c--cCccCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHH
Confidence 555 99999999876543 21 1 1 1222333334444 46777777653 577799999998888743
Q ss_pred ---------CCc------------------------------------------------c--cc-cccEEEEcCccccc
Q psy10669 117 ---------LPT------------------------------------------------N--NA-RFDFLSSGTTCYSR 136 (337)
Q Consensus 117 ---------l~~------------------------------------------------~--~a-~pklII~~~S~~~~ 136 (337)
..+ + +. ++++||+. .++++
T Consensus 118 r~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaiiie-p~~~~ 196 (403)
T PRK05093 118 RRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDDHTCAVVVE-PIQGE 196 (403)
T ss_pred HHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcCCeEEEEEe-cccCC
Confidence 011 0 00 14677776 46665
Q ss_pred ccC-------hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c--CCchhh----h--hHHHHHh
Q psy10669 137 CLD-------YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K--TGEKIL----Y--DYEEKIN 187 (337)
Q Consensus 137 ~~d-------~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~--~Gg~i~----~--~l~~~i~ 187 (337)
.+. +++|.++|+++|+++++|+.|. |+.- | + ..|. | .+|+-+ . ++.+.+.
T Consensus 197 gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~vv~~~~i~~~l~ 275 (403)
T PRK05093 197 GGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDILTSAKALGGGFPIGAMLTTAEIASHFK 275 (403)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCEEEecccccCCcceEEEEEcHHHHhhcC
Confidence 443 5678899999999999999998 5421 1 0 1111 2 123222 2 4656665
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE--Eec-CCCCCeEEEEEecCCC-cc
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH--VVT-GGTDVHLILIDLRKNK-LT 263 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~--v~~-~~t~~h~v~V~~~~~~-~~ 263 (337)
.......+ +.+++..++...++..+.+ .++.+++.++.++|.+.|.+.+.+ +.. .....-++.+.+.+.. -.
T Consensus 276 ~~~~~~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~ 351 (403)
T PRK05093 276 VGTHGSTY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGR 351 (403)
T ss_pred CCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhH
Confidence 43333334 3555666666666655532 356788999999999999885422 211 0012344555554321 13
Q ss_pred hHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 264 GSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 264 ~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
..++...|.+.||.+.+.. .+||..+
T Consensus 352 ~~~~~~~l~~~Gv~v~~~g~~~lRl~~~ 379 (403)
T PRK05093 352 ARDFLNAAAEEGVMVLVAGPDVLRFAPS 379 (403)
T ss_pred HHHHHHHHHHCCeEEecCCCCEEEEeCC
Confidence 4566677777799987532 6777533
No 132
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=98.85 E-value=2.2e-07 Score=91.33 Aligned_cols=238 Identities=15% Similarity=0.119 Sum_probs=140.3
Q ss_pred cceeeeccCCC-----CCHHHHHHHhhhhhhccCCCCCCCcCcCc---cchHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669 31 NGIELIASENF-----TSLAVLECLGSCLQNKYSEGLPGKRYYGG---NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP 102 (337)
Q Consensus 31 ~~i~l~asen~-----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G---~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~ 102 (337)
..|.+...+++ .+|.|.+++...+. +. .++..+ +....+++ ++++++++.+.+ ..+.+
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~-~~------~~~~~~~~~~~~~~~l~----~~l~~~~~~~~~---~v~~~ 102 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLA-KL------THFSLGFFYNEPAVELA----ELLLALTPEGLD---KVFFV 102 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHH-hC------cCccCcccCCHHHHHHH----HHHHHhCCCCCC---EEEEc
Confidence 34555444443 38999999987653 21 222222 22233444 688899985332 23556
Q ss_pred CCCchhHHHHHHhhC---Cc------------------------------------------c-----------c-----
Q psy10669 103 YSGSPANFAVCEKAL---PT------------------------------------------N-----------N----- 121 (337)
Q Consensus 103 ~Sgt~AN~~v~~aLl---~~------------------------------------------~-----------~----- 121 (337)
+||+.||.+++..+. +. . -
T Consensus 103 ~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 182 (413)
T cd00610 103 NSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALE 182 (413)
T ss_pred CcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHH
Confidence 777999988877652 11 0 0
Q ss_pred ----c---cccEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc
Q psy10669 122 ----A---RFDFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK 173 (337)
Q Consensus 122 ----a---~pklII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~ 173 (337)
. ++++||+.+ ++++ ..+ +++|.++|+++|+++++|++|+ |+ .+ + +.+..|
T Consensus 183 ~~l~~~~~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~t~sK 260 (413)
T cd00610 183 EALEEHPEEVAAVIVEP-IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIVTLGK 260 (413)
T ss_pred HHHhcCCCCEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeEEEcc
Confidence 0 134666653 5544 344 7788999999999999999997 33 11 1 111122
Q ss_pred -------CCchhhh-hHHHHH--hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC--
Q psy10669 174 -------TGEKILY-DYEEKI--NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY-- 241 (337)
Q Consensus 174 -------~Gg~i~~-~l~~~i--~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~-- 241 (337)
-|+++.. ++.+.+ ....+.. ..+.++..+++...++..+.+ ++..+++.++.++|++.|++.+.
T Consensus 261 ~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~-t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~ 336 (413)
T cd00610 261 GLGGGLPLGAVLGREEIMDAFPAGPGLHGG-TFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKH 336 (413)
T ss_pred cccCccccEEEEEcHHHHHhhccCCCCCCC-CCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 1332222 465554 2222222 224455566666666665533 46788999999999999887532
Q ss_pred EEec-CCCCCeEEEEEecCCC-------cchHHHHHHHhhcCceeccC--cccchhh
Q psy10669 242 HVVT-GGTDVHLILIDLRKNK-------LTGSKVELVLEEIAIACNKN--TGISLAA 288 (337)
Q Consensus 242 ~v~~-~~t~~h~v~V~~~~~~-------~~~~~~~~~L~~~gI~v~~~--~girig~ 288 (337)
.+.. .....+++++.+.+.. .....+.+.|.+.||.+.+. ..+|+..
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~ 393 (413)
T cd00610 337 PLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLP 393 (413)
T ss_pred CcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEEC
Confidence 2221 1235677888876542 34567778888889999875 2567653
No 133
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=98.85 E-value=5.8e-08 Score=95.66 Aligned_cols=222 Identities=15% Similarity=0.157 Sum_probs=133.2
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCE 114 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~ 114 (337)
...+..|..+.+.++.... ..+ ..|++.+|+ ++...+++| +++++++|.++ .+.++||+.|+..++.
T Consensus 28 i~~~~~~~~~~~~~~~~~~-~~~-~~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~ 94 (390)
T PRK08133 28 LFLTSSFVFESAAEAAARF-AGE-EPGNIYSRF--TNPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVM 94 (390)
T ss_pred ccCCCCcccCCHHHHHHhh-cCC-cCCceeECC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH
Confidence 5555666667776665432 212 124444454 355567777 57889999986 5888899999988888
Q ss_pred hhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhh
Q psy10669 115 KALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDE 149 (337)
Q Consensus 115 aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~ 149 (337)
+++++ +.+ ++|+|++. +++ .+...|+++|.++|++
T Consensus 95 al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~ 174 (390)
T PRK08133 95 ALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHA 174 (390)
T ss_pred HHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHH
Confidence 88754 111 26888874 444 4688899999999999
Q ss_pred cCCeEEEeccccccccc-----e---ee-eecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHH
Q psy10669 150 TDSIMFADMSHISGLIA-----G---VK-GVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAM 210 (337)
Q Consensus 150 ~ga~l~vD~AH~~Gli~-----g---~~-~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~ 210 (337)
+|+++++|++|..++.. | ++ |.+| .||+++. ++.+++...... .|....+.-+.+ .+
T Consensus 175 ~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~--~g~~~~~~~a~~--~l 250 (390)
T PRK08133 175 AGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRT--AGPTLSPFNAWV--FL 250 (390)
T ss_pred cCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHH--hCCCCCHHHHHH--HH
Confidence 99999999999877643 1 22 2222 2577765 333333322111 122222222222 22
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCCCCC---------------eEEEEEecCCCcchHHHHHHHhh
Q psy10669 211 LQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGGTDV---------------HLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 211 ~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~t~~---------------h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
..+ .....+.++..+|++.+++.|.+. ++. |+..+..+ -++.+++. + +...+.+.++.
T Consensus 251 ~gl--~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~--~-~~~~~~~f~~~ 325 (390)
T PRK08133 251 KGL--ETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK--G-GREAAWRVIDA 325 (390)
T ss_pred ccc--chHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc--C-CHHHHHHHHHh
Confidence 222 245677888889999999999984 554 22222222 25555553 2 33445566666
Q ss_pred cCcee
Q psy10669 274 IAIAC 278 (337)
Q Consensus 274 ~gI~v 278 (337)
..+..
T Consensus 326 l~l~~ 330 (390)
T PRK08133 326 TRLIS 330 (390)
T ss_pred CCcce
Confidence 55543
No 134
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.83 E-value=4e-07 Score=90.06 Aligned_cols=232 Identities=15% Similarity=0.091 Sum_probs=133.4
Q ss_pred CCCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669 39 ENFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK 115 (337)
Q Consensus 39 en~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a 115 (337)
.+++ +|.|.+|+...+. ++. ..+..+ .+....+++ ++++++++.+. ...+.||+.||.++++.
T Consensus 50 ~~~lGh~~p~v~~A~~~~~~-~~~--~~~~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ 115 (406)
T PRK12381 50 VNALGHAHPALREALNEQAS-KFW--HTGNGY--TNEPVLRLA----KKLIDATFADR-----VFFCNSGAEANEAALKL 115 (406)
T ss_pred hccCCCCCHHHHHHHHHHHh-hcc--cccCcc--CCHHHHHHH----HHHHhhCCCCe-----EEEcCCcHHHHHHHHHH
Confidence 4555 9999999987654 321 112211 122223333 57778776543 46668899999888776
Q ss_pred hC---------Cc------------------------------------------------c--cc-cccEEEEcCcccc
Q psy10669 116 AL---------PT------------------------------------------------N--NA-RFDFLSSGTTCYS 135 (337)
Q Consensus 116 Ll---------~~------------------------------------------------~--~a-~pklII~~~S~~~ 135 (337)
.. ++ + +. ++++||+. .+++
T Consensus 116 ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~~ 194 (406)
T PRK12381 116 ARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQG 194 (406)
T ss_pred HHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCcC
Confidence 30 11 0 00 14567775 4666
Q ss_pred ccc-------ChHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c--CCchhhh------hHHHHH
Q psy10669 136 RCL-------DYARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K--TGEKILY------DYEEKI 186 (337)
Q Consensus 136 ~~~-------d~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~--~Gg~i~~------~l~~~i 186 (337)
+.+ .+++|+++|+++|++||+|+.| .|+-- | + ..|. | .||+.++ ++.+.+
T Consensus 195 ~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG~~ig~~~~~~~~~~~~ 273 (406)
T PRK12381 195 EGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDVLTTAKALGGGFPIGAMLTTEKCASVM 273 (406)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCEEEehhhhhCCCceEEEEEcHHHHhhc
Confidence 543 3456889999999999999999 56511 1 1 1121 2 1454432 455555
Q ss_pred hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCeEEEEEecCCC-c
Q psy10669 187 NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVHLILIDLRKNK-L 262 (337)
Q Consensus 187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h~v~V~~~~~~-~ 262 (337)
....+..++ +.++...++...++..+.+ ++.++++.++.++|.+.|.+.+ +.++.. .....++.+.+.+.. -
T Consensus 274 ~~~~~~~t~-~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~ 349 (406)
T PRK12381 274 TVGTHGTTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAG 349 (406)
T ss_pred CCCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhh
Confidence 543333333 3455666666666655432 3578889999999999998854 332220 012334455554321 1
Q ss_pred chHHHHHHHhhcCceeccCc--ccchhhhh
Q psy10669 263 TGSKVELVLEEIAIACNKNT--GISLAAEI 290 (337)
Q Consensus 263 ~~~~~~~~L~~~gI~v~~~~--girig~~~ 290 (337)
....+.+.|.+.||.+.... .|||..+.
T Consensus 350 ~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~ 379 (406)
T PRK12381 350 KAKQISQEAAKAGVMVLIAGPNVVRFAPAL 379 (406)
T ss_pred HHHHHHHHHHHCCcEEeeCCCCEEEEeCCc
Confidence 34567777888899986422 57776443
No 135
>PRK09082 methionine aminotransferase; Validated
Probab=98.82 E-value=1.5e-06 Score=85.18 Aligned_cols=259 Identities=13% Similarity=0.112 Sum_probs=145.3
Q ss_pred hhhhcHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 11 LAQTDPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
+....+.++..+.+..+ +..-|+|-..++-. ++.+.+++...+...+ .+|+. ..|. .++.....+.+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~---~~lr~~~a~~l~~~ 83 (386)
T PRK09082 12 LPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP---MTGV---AALREAIAAKTARL 83 (386)
T ss_pred hhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCc---HHHHHHHHHHHHHH
Confidence 33344445444443322 23446666544433 6888888876543211 11211 1222 33433334566778
Q ss_pred cCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccc--
Q psy10669 89 FNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNA-- 122 (337)
Q Consensus 89 fg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a-- 122 (337)
+|.+...- -+|.+++| ++|...++.+++++ +..
T Consensus 84 ~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~ 162 (386)
T PRK09082 84 YGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP 162 (386)
T ss_pred hCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc
Confidence 88642100 14777777 67887777888654 001
Q ss_pred cccEEEEcCcccc--cc---cChHHHHHHhhhcCCeEEEeccccccccc-----------e------eeeec-c----CC
Q psy10669 123 RFDFLSSGTTCYS--RC---LDYARFRQICDETDSIMFADMSHISGLIA-----------G------VKGVT-K----TG 175 (337)
Q Consensus 123 ~pklII~~~S~~~--~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g------~~~T~-~----~G 175 (337)
++++|++..-.++ .. -++++|.++|+++|+++++|+++.-.... + +.++. | .|
T Consensus 163 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G 242 (386)
T PRK09082 163 RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG 242 (386)
T ss_pred cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh
Confidence 2677777522332 33 35666778999999999999998532221 0 12222 2 13
Q ss_pred ---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669 176 ---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV 250 (337)
Q Consensus 176 ---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~ 250 (337)
|++++ ++.+.+.........+ ++.+...+++..+..- ....++.++...++.+++.+.|.+.|+++... ..+
T Consensus 243 ~RiG~iv~~~~l~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~g~ 319 (386)
T PRK09082 243 WKVGYCVAPAALSAEFRKVHQYNTFT-VNTPAQLALADYLRAE-PEHYLELPAFYQAKRDRFRAALANSRFKLLPC-EGT 319 (386)
T ss_pred hhhhhhhCCHHHHHHHHHHHhhhcCC-CChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Cee
Confidence 77765 4555444432111122 3333333333333321 23345667788899999999999988887542 335
Q ss_pred eEEEEEecC-CCcchHHHHHHH-hhcCceeccC
Q psy10669 251 HLILIDLRK-NKLTGSKVELVL-EEIAIACNKN 281 (337)
Q Consensus 251 h~v~V~~~~-~~~~~~~~~~~L-~~~gI~v~~~ 281 (337)
..+++++.+ .+.+..++.+.| +++||.+.+-
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg 352 (386)
T PRK09082 320 YFQLVDYSAISDLDDVEFCQWLTREHGVAAIPL 352 (386)
T ss_pred EEEEEeccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 567778764 355677887765 6789998763
No 136
>PRK06460 hypothetical protein; Provisional
Probab=98.82 E-value=8.8e-08 Score=93.92 Aligned_cols=153 Identities=15% Similarity=0.142 Sum_probs=102.2
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------- 119 (337)
...+++| +++++++|.++ ++.++||+.|+..++.+++++
T Consensus 45 p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 45 PTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 4456676 58899999975 688899999998888888654
Q ss_pred ---------ccc--cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c----
Q psy10669 120 ---------NNA--RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K---- 173 (337)
Q Consensus 120 ---------~~a--~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~---- 173 (337)
+.. ++|+|++...++ +...|.++|.++|+++|+++++|++|..++.. .++.+. |
T Consensus 116 ~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G 195 (376)
T PRK06460 116 NPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAG 195 (376)
T ss_pred CCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccC
Confidence 111 267777763333 58999999999999999999999999876432 123332 2
Q ss_pred ----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.+|+++. ++.+.+.....+. |....+..|.++ +..+ +..+.+++++.+|++++++.|++.
T Consensus 196 ~~~~~~G~~~~~~~l~~~l~~~~~~~--g~~~~~~~a~~~--l~~~--~~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 196 HNDVIAGLAAGYGKLLNVIDQMRRTL--GTSLDPHAAYLT--LRGI--KTLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhc--CCCCCHHHHHHH--Hhch--hhHHHHHHHHHHHHHHHHHHHHcC
Confidence 1466655 5666665433332 222223222221 2121 234678899999999999999984
No 137
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=98.81 E-value=6.2e-08 Score=95.88 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=108.6
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+++| +++++++|.++ ++.+.||+.|+..++.+++++
T Consensus 68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~ 138 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETV 138 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEE
Confidence 556678888 58899999886 799999999998888888654
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|++++||++|..|+.. | + .|.+|
T Consensus 139 ~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l 218 (403)
T PRK07810 139 FVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHI 218 (403)
T ss_pred EECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCcee
Confidence 111 26788775 333 357789999999999999999999999988764 1 2 22222
Q ss_pred ------CCchhhh--h-HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE
Q psy10669 174 ------TGEKILY--D-YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH 242 (337)
Q Consensus 174 ------~Gg~i~~--~-l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~ 242 (337)
.||++++ + +.+.+..... ..|....+..|+++.. .+ .....+.++-.+|+.++++.|.+. ++.
T Consensus 219 ~g~g~~~gG~v~~~~~~~~~~l~~~~~--~~g~~~s~~~a~l~l~--~L--~tl~~R~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 219 DGQGRVLGGAILGDREYIDGPVQKLMR--HTGPALSAFNAWVLLK--GL--ETLALRVRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred cCCcCceeEEEEeChHHHHHHHHHHHH--HhCCCCCHHHHHHHHh--cc--CcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 1677765 2 3333432211 1334445555554332 33 245788999999999999999873 443
No 138
>PRK06234 methionine gamma-lyase; Provisional
Probab=98.81 E-value=1.1e-07 Score=93.93 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=108.0
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++....+|| +++++++|.++ .+.+.||+.|+..++.+++++
T Consensus 62 ~~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 132 (400)
T PRK06234 62 GNPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVT 132 (400)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEE
Confidence 556677888 58899999875 688999999998888888754
Q ss_pred --------cc--c---cccEEEEc-Ccc-cccccChHHHHHHhhhc--CCeEEEeccccccccc-----e---e-eeecc
Q psy10669 120 --------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQICDET--DSIMFADMSHISGLIA-----G---V-KGVTK 173 (337)
Q Consensus 120 --------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia~~~--ga~l~vD~AH~~Gli~-----g---~-~~T~~ 173 (337)
++ + ++|+|++. +++ .+...|+++|.++|+++ |+++++|++|..+... + + .|..|
T Consensus 133 ~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK 212 (400)
T PRK06234 133 FVDTSNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATK 212 (400)
T ss_pred EECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccc
Confidence 01 1 26888876 333 35788999999999997 9999999999988654 1 2 22222
Q ss_pred --------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 --------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 --------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||++++ ++.+.+.........|+...+..+++... .+ .....+.++..+|++++++.|.+.
T Consensus 213 ~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~--~l--~tl~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 213 YLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIR--GM--KTLQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred cccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHh--cc--CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 1577765 46555543212233445555555554432 33 235678888899999999999873
No 139
>PRK07503 methionine gamma-lyase; Provisional
Probab=98.80 E-value=1e-07 Score=94.33 Aligned_cols=157 Identities=16% Similarity=0.103 Sum_probs=106.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++....++| +++++++|+++ ++.++||+.|+..++.+++++
T Consensus 63 ~~p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~ 133 (403)
T PRK07503 63 SNPTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVR 133 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEE
Confidence 445667787 57899999986 688999999988777788654
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~~-- 173 (337)
+.+ ++|+|++. .++ .+...|+++|.++|+++|+++++|++|..+... + ++ |.+|
T Consensus 134 ~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l 213 (403)
T PRK07503 134 HVDLTDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYL 213 (403)
T ss_pred EeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccc
Confidence 101 26888875 322 358889999999999999999999999877543 1 22 2222
Q ss_pred ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||+++. ++.+++.........|....+.-|++... .+ .....+.++..+|++.+++.|.+.
T Consensus 214 ~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~--~L--~tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 214 GGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMR--GL--KTLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred cCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHc--Cc--chHHHHHHHHHHHHHHHHHHHHhC
Confidence 2566655 46565543212233444455555554432 33 234567777789999999999984
No 140
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=98.79 E-value=5.9e-07 Score=88.13 Aligned_cols=214 Identities=13% Similarity=0.094 Sum_probs=127.2
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCc-cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGG-NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT 119 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G-~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~ 119 (337)
+++..++++...+.... +.| .....++| +.+++++|.++ .+...||+.|...++.++ +++
T Consensus 9 ~~~~e~~a~~~~~~~~~---------~~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p 70 (376)
T TIGR02379 9 VTGQELEYIAEAISEGK---------LSGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP 70 (376)
T ss_pred CCHHHHHHHHHHHHcCC---------ccCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 45666777766544321 222 24456777 46778889875 466667788866656666 443
Q ss_pred ------------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeE
Q psy10669 120 ------------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIM 154 (337)
Q Consensus 120 ------------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l 154 (337)
+.+ ++|+|+..+ .++...|+++|.++|+++|+++
T Consensus 71 Gd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Iip~~-~~G~~~d~~~I~~la~~~~i~v 149 (376)
T TIGR02379 71 GDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIVPVH-YAGVACDMDTIMALANKHQLFV 149 (376)
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEEeC-CCCCccCHHHHHHHHHHCCCEE
Confidence 111 268888764 5689999999999999999999
Q ss_pred EEeccccccc-cc----------eeee--------eccCCchhhh---hHHHHHhhccCCC------------------C
Q psy10669 155 FADMSHISGL-IA----------GVKG--------VTKTGEKILY---DYEEKINNAVFPS------------------L 194 (337)
Q Consensus 155 ~vD~AH~~Gl-i~----------g~~~--------T~~~Gg~i~~---~l~~~i~~~~~p~------------------~ 194 (337)
+.|++|+.|. +. +..| +++.||++++ ++.+++.....-+ .
T Consensus 150 IeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 229 (376)
T TIGR02379 150 IEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDI 229 (376)
T ss_pred EEECccccCCccCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeee
Confidence 9999999875 32 1112 1235787765 3555433211000 1
Q ss_pred CCCCcHHHH-HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---C-CEEec--CC--CCCeEEEEEecCCCcchH
Q psy10669 195 QGGPHNHAI-GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---G-YHVVT--GG--TDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 195 ~g~~~~~~i-aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---G-~~v~~--~~--t~~h~v~V~~~~~~~~~~ 265 (337)
..+..+..+ |++..+ ++ ...++..++-.++++...+.|.+. + ..+.. .+ ...|+.++.+... .+-.
T Consensus 230 g~n~~~~~~~Aa~g~~--qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~r~ 304 (376)
T TIGR02379 230 GSSYLPSELQAAYLWA--QL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-DDRN 304 (376)
T ss_pred cccCCccHHHHHHHHH--HH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-CCHH
Confidence 111112222 333322 22 234566677777888888887653 2 22221 11 1236777777543 4678
Q ss_pred HHHHHHhhcCceec
Q psy10669 266 KVELVLEEIAIACN 279 (337)
Q Consensus 266 ~~~~~L~~~gI~v~ 279 (337)
++.+.|.+.||.++
T Consensus 305 ~l~~~L~~~gI~~~ 318 (376)
T TIGR02379 305 ELIKYLKEQEIMAV 318 (376)
T ss_pred HHHHHHHHCCCCcc
Confidence 88899999999876
No 141
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=98.78 E-value=1.2e-07 Score=93.67 Aligned_cols=155 Identities=13% Similarity=0.080 Sum_probs=105.9
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|.++ ++.++||+.|+..++.+++++
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~ 132 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVT 132 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEE
Confidence 556667887 58899999875 699999999998888888654
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..++.. .++++. |
T Consensus 133 ~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l 212 (398)
T PRK08249 133 LCETGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFL 212 (398)
T ss_pred EcCCCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceec
Confidence 101 26888874 433 358899999999999999999999999987643 122222 2
Q ss_pred ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||+++. ++.+++..... ..|+...+..++++.. .+ .....+.++..+|++.+++.|.+.
T Consensus 213 ~g~~~~~gG~vv~~~~l~~~l~~~~~--~~g~~~s~~~a~l~l~--~l--~tL~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 213 SGHADALGGVVCGSKELMEQVYHYRE--INGATMDPMSAYLILR--GM--KTLKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred CCCCCceEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHh--Cc--chHHHHHHHHHHHHHHHHHHHHcC
Confidence 1466655 45555543211 1334444545544332 22 234577888899999999999983
No 142
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.78 E-value=2.2e-06 Score=83.40 Aligned_cols=232 Identities=16% Similarity=0.105 Sum_probs=140.8
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhc--cCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----C--CCCCCCccee
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNK--YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----N--LDPEQWGCNV 100 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~--y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g--~~~~~~~~~v 100 (337)
..|.|-..+|.. +|.+++++...+... ...+||. .| ..++. +.+++++ | .+. .+|
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~----~g---~~~lr----~aia~~~~~~~~~~~~~----~~I 91 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD----RD---AVALR----ADLAAYLTAQTGVGLTV----ENV 91 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC----Cc---hHHHH----HHHHHHhhhhccCCCCh----hhE
Confidence 346777777765 888999987654321 0112221 11 22333 3444555 4 333 368
Q ss_pred ecCCCc-hhHHHHHHhhCCc-----------------------------------------cc----ccccEEEEcCccc
Q psy10669 101 QPYSGS-PANFAVCEKALPT-----------------------------------------NN----ARFDFLSSGTTCY 134 (337)
Q Consensus 101 ~~~Sgt-~AN~~v~~aLl~~-----------------------------------------~~----a~pklII~~~S~~ 134 (337)
..++|+ ++...++.+++++ +. .++|+|++..-.+
T Consensus 92 ~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~N 171 (368)
T PRK03317 92 WAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNN 171 (368)
T ss_pred EECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCC
Confidence 888995 6777777887653 00 1267766652233
Q ss_pred --ccccChHHHHHHhhhcCCeEEEeccccc----cccc-----------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669 135 --SRCLDYARFRQICDETDSIMFADMSHIS----GLIA-----------GVKGVT-K----TG---EKILY--DYEEKIN 187 (337)
Q Consensus 135 --~~~~d~~~l~eia~~~ga~l~vD~AH~~----Gli~-----------g~~~T~-~----~G---g~i~~--~l~~~i~ 187 (337)
+...+.+++++|++..+++|++|++|.- |... .+..|. | .| |++++ ++.+.+.
T Consensus 172 PtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~ 251 (368)
T PRK03317 172 PTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALR 251 (368)
T ss_pred CCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHH
Confidence 6888899999999999999999999972 2111 122233 2 24 66665 5767666
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE-EecCCCcchHH
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI-DLRKNKLTGSK 266 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V-~~~~~~~~~~~ 266 (337)
....+. +.+....++...++... ..+.+.++++.++.+.+.+.|.+.|+.+.. ++...+++ ++. +..+
T Consensus 252 ~~~~~~---~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~----~~~~ 320 (368)
T PRK03317 252 LVRLPY---HLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAP--SDANFVLFGRFA----DRHA 320 (368)
T ss_pred hcCCCC---CCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCC--CCCcEEEEeccC----CHHH
Confidence 543332 23344454444555432 345566777888888899999999988754 33343333 332 4677
Q ss_pred HHHHHhhcCceeccCc---ccchhh
Q psy10669 267 VELVLEEIAIACNKNT---GISLAA 288 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~~---girig~ 288 (337)
+.+.|.+.||.+.... .+||+.
T Consensus 321 ~~~~l~~~Gv~v~~~~~~~~iRi~~ 345 (368)
T PRK03317 321 VWQGLLDRGVLIRDVGIPGWLRVTI 345 (368)
T ss_pred HHHHHHHCCEEEEeCCCCCeEEEec
Confidence 8888888999997533 678764
No 143
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=98.77 E-value=5.6e-06 Score=80.87 Aligned_cols=243 Identities=14% Similarity=0.116 Sum_probs=136.5
Q ss_pred hcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 28 RQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 28 rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
.+.+.+.|-..++-. ++.+.+++...+.+....+|+- ..| ..++-....+.+.+.+|.+.+.- .+|.+++|
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G 99 (383)
T TIGR03540 27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPS---YEG---MLAYRQAVADWYKRRFGVELDPE-TEVLSLIG 99 (383)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCCC-CeEEECCC
Confidence 344556666655553 7788888876543211111111 122 22332222223334445431100 14778777
Q ss_pred -chhHHHHHHhhCCc-----------------------------------------cc----c-cccEEEEcCccc--cc
Q psy10669 106 -SPANFAVCEKALPT-----------------------------------------NN----A-RFDFLSSGTTCY--SR 136 (337)
Q Consensus 106 -t~AN~~v~~aLl~~-----------------------------------------~~----a-~pklII~~~S~~--~~ 136 (337)
+++...++.+++++ ++ . ++|+|++..-.+ +.
T Consensus 100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~ 179 (383)
T TIGR03540 100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGA 179 (383)
T ss_pred cHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCc
Confidence 56766677787654 00 1 278787762234 47
Q ss_pred ccCh---HHHHHHhhhcCCeEEEeccccccccc----------------ee-eeec-c----CC---chhhh--hHHHHH
Q psy10669 137 CLDY---ARFRQICDETDSIMFADMSHISGLIA----------------GV-KGVT-K----TG---EKILY--DYEEKI 186 (337)
Q Consensus 137 ~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~-~~T~-~----~G---g~i~~--~l~~~i 186 (337)
..+. ++|.++|+++|+++++|+++.--... .+ ..|. | .| |+++. ++.+.+
T Consensus 180 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~ 259 (383)
T TIGR03540 180 VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGL 259 (383)
T ss_pred cCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHH
Confidence 7774 55667889999999999998521110 01 2222 2 23 66655 566655
Q ss_pred hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669 187 NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~ 266 (337)
..... ....+++.+...++..++... ....++.++++.++.+.+.+.|++.|+.+... ..+..+++.+.+ +++..+
T Consensus 260 ~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~~~~~~~l~~-~~~~~~ 335 (383)
T TIGR03540 260 GKVKT-NVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKP-KATFYVWVPVPE-GYTSAE 335 (383)
T ss_pred HHHHH-hcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCC-CcceEEEEECCC-CCCHHH
Confidence 54321 122233444444444444332 22335667888899999999999999887642 235557787754 556777
Q ss_pred HHHHH-hhcCceeccC
Q psy10669 267 VELVL-EEIAIACNKN 281 (337)
Q Consensus 267 ~~~~L-~~~gI~v~~~ 281 (337)
+.+.| ++.||.+.+-
T Consensus 336 ~~~~ll~~~gi~v~~g 351 (383)
T TIGR03540 336 FAARLLEETGVVVTPG 351 (383)
T ss_pred HHHHHHHHCCEEEecc
Confidence 77665 6789998863
No 144
>PRK08361 aspartate aminotransferase; Provisional
Probab=98.76 E-value=3.5e-06 Score=82.64 Aligned_cols=238 Identities=14% Similarity=0.101 Sum_probs=132.3
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg 105 (337)
.+-|+|-..++-. ++.+++++...+.... ..|....-..+++....+.+.+.+|. +. -+|.+++|
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~i~~t~G 101 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGW-------THYTPNAGIPELREAIAEYYKKFYGVDVDV----DNVIVTAG 101 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCc----ccEEEeCC
Confidence 4457777666655 5788888776543211 11222222344543333344444453 33 25777777
Q ss_pred -chhHHHHHHhhCCc--------------------------------c---------c--c---cccEEEEc-Ccc-ccc
Q psy10669 106 -SPANFAVCEKALPT--------------------------------N---------N--A---RFDFLSSG-TTC-YSR 136 (337)
Q Consensus 106 -t~AN~~v~~aLl~~--------------------------------~---------~--a---~pklII~~-~S~-~~~ 136 (337)
++|+..++.+++++ + + + ++++|++. +++ .+.
T Consensus 102 ~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~ 181 (391)
T PRK08361 102 AYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGA 181 (391)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCc
Confidence 67888778888654 0 0 0 15666665 333 357
Q ss_pred ccC---hHHHHHHhhhcCCeEEEeccccccccc---------------eeeeec-c----CC---chhhh--hHHHHHhh
Q psy10669 137 CLD---YARFRQICDETDSIMFADMSHISGLIA---------------GVKGVT-K----TG---EKILY--DYEEKINN 188 (337)
Q Consensus 137 ~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~-~----~G---g~i~~--~l~~~i~~ 188 (337)
..| +++|.++|+++++++++|+++.-.+.. .+++|. | .| |+++. ++.+.+..
T Consensus 182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~ 261 (391)
T PRK08361 182 TLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIK 261 (391)
T ss_pred CcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHH
Confidence 777 556677899999999999997532221 122332 2 13 66665 45554433
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669 189 AVFPSLQGGPHNHAIGAIATAMLQAQS-DEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 189 ~~~p~~~g~~~~~~iaala~a~~e~~~-~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~ 266 (337)
. .+...++.+.....++..++.+-.. ...++.+++..++.+.+.+.|.+. |+.+... ..+-.+++.+...+++..+
T Consensus 262 ~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p-~g~~~~~~~l~~~~~~~~~ 339 (391)
T PRK08361 262 L-HAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP-KGAFYVFANIDETGMSSED 339 (391)
T ss_pred H-HhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC-CEEEEEEEECCCCCCCHHH
Confidence 2 1111223333333333333322100 113566777788888888999885 7776542 2244577777655567777
Q ss_pred HHHHHh-hcCceecc
Q psy10669 267 VELVLE-EIAIACNK 280 (337)
Q Consensus 267 ~~~~L~-~~gI~v~~ 280 (337)
+...|. ++||.+.+
T Consensus 340 l~~~l~~~~gv~v~p 354 (391)
T PRK08361 340 FAEWLLEKARVVVIP 354 (391)
T ss_pred HHHHHHHhCCEEEcC
Confidence 777664 58999876
No 145
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=98.75 E-value=2.2e-06 Score=82.92 Aligned_cols=224 Identities=14% Similarity=0.081 Sum_probs=135.7
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~ 107 (337)
..|.|-..+|.. +|.|++++...+.. .. .+|.. ...++ ++.++++++.+. -+|.+++|+ +
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~~-------g~~~l----r~~ia~~~~~~~----~~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPDG-------YAPEL----RTKVAKHLGVDE----EQLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCCC-------cHHHH----HHHHHHHhCCCH----HHEEECCCHHH
Confidence 345665555544 88899988764332 11 11111 12333 457788888865 368888885 5
Q ss_pred hHHHHHHhhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHH
Q psy10669 108 ANFAVCEKALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYAR 142 (337)
Q Consensus 108 AN~~v~~aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~ 142 (337)
+...++.+++++ +.+ ++++|++. +.+ -+...+.++
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~ 172 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEE 172 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHH
Confidence 655556677543 001 25776654 433 358888999
Q ss_pred HHHHhhh--cCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCC
Q psy10669 143 FRQICDE--TDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSL 194 (337)
Q Consensus 143 l~eia~~--~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~ 194 (337)
+.++++. +|+++++|++|.-.... .+..|. | .| |+++. ++.+.+.....+
T Consensus 173 l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~-- 250 (359)
T PRK03158 173 LLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP-- 250 (359)
T ss_pred HHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--
Confidence 9998877 49999999998542221 112332 2 23 77765 566766655333
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
. +.+....+++..++.. ....++++++..++.+.+.+.|.+.|+.+.. ++...+++++. .+..++.+.|.+.
T Consensus 251 ~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~g~~i~~~~~---~~~~~~~~~l~~~ 322 (359)
T PRK03158 251 F-NTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYP--SQTNFIFVDTG---RDANELFEALLKK 322 (359)
T ss_pred C-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCC--CcCcEEEEECC---CCHHHHHHHHHHC
Confidence 2 2344444444444432 1123455666777777888888888888765 33445677764 2567778888888
Q ss_pred CceeccC
Q psy10669 275 AIACNKN 281 (337)
Q Consensus 275 gI~v~~~ 281 (337)
||.+.+.
T Consensus 323 gv~v~~g 329 (359)
T PRK03158 323 GYIVRSG 329 (359)
T ss_pred CeEEeeC
Confidence 9999874
No 146
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=98.75 E-value=1.9e-06 Score=83.42 Aligned_cols=222 Identities=13% Similarity=0.105 Sum_probs=134.0
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~ 107 (337)
..+.|-..+|-. |+.+.+++...+... .. .+ |... ...++ |+.++++++.+. .+|.+++|+ +
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~----~~-~~-y~~~-~~~~l----r~~ia~~~~~~~----~~i~it~G~~~ 87 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSS----QV-NI-YPDP-TAEKL----REELARYCSVVP----TNIFVGNGSDE 87 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcC----cc-cC-CCCc-cHHHH----HHHHHHHhCCCc----ccEEEecCHHH
Confidence 345555555543 799999986543211 11 11 2211 12333 467788999875 368888995 5
Q ss_pred hHHHHHHhhCCc-----------------------------------------cc---c-cccEEEEc-Ccc-cccccCh
Q psy10669 108 ANFAVCEKALPT-----------------------------------------NN---A-RFDFLSSG-TTC-YSRCLDY 140 (337)
Q Consensus 108 AN~~v~~aLl~~-----------------------------------------~~---a-~pklII~~-~S~-~~~~~d~ 140 (337)
+...++.+++++ +. . ++|+|++. +++ .+...|.
T Consensus 88 ~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~ 167 (351)
T PRK14807 88 IIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER 167 (351)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 666666777654 00 1 26777765 332 3588999
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~ 197 (337)
+++.++|++++.++++|++|. .+.+ .+.++. | .| |+++. ++.+.+.....+. +
T Consensus 168 ~~l~~l~~~~~~~~ivDe~y~-~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~---~ 243 (351)
T PRK14807 168 EDIIKIIEKSRGIVVVDEAYF-EFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPY---N 243 (351)
T ss_pred HHHHHHHHhCCCEEEEeCcch-hhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCCC---C
Confidence 999999999889999999984 2222 122332 2 12 66665 5666665433332 2
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
.+.....++...+. ...+++..+++.++.+.+.+.|.+ .|+.+.. .+...+++.+. +..++.+.|.+.||
T Consensus 244 ~~~~~q~~~~~~l~---~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~--~~~~~~~i~~~----~~~~~~~~l~~~gV 314 (351)
T PRK14807 244 INSLSQVIALKVLR---TGVLKERVNYILNERERLIKELSKIPGIKVYP--SKTNFILVKFK----DADYVYQGLLERGI 314 (351)
T ss_pred cCHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECc--CCccEEEEEcC----CHHHHHHHHHHCCE
Confidence 22333333333332 234566677788888889899877 4887654 33445667764 35677888888899
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+..
T Consensus 315 ~v~~ 318 (351)
T PRK14807 315 LVRD 318 (351)
T ss_pred EEEE
Confidence 9864
No 147
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.74 E-value=3.6e-07 Score=97.54 Aligned_cols=198 Identities=14% Similarity=0.154 Sum_probs=122.2
Q ss_pred HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC-------c------------------------------------
Q psy10669 83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP-------T------------------------------------ 119 (337)
Q Consensus 83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~-------~------------------------------------ 119 (337)
+.+++++|.+. +.+++.||+++++++++++-. +
T Consensus 550 ~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~ 625 (954)
T PRK12566 550 AWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGN 625 (954)
T ss_pred HHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCC
Confidence 68899999998 689999999999988888621 0
Q ss_pred -------ccc---ccc--EEEEc-Ccccc-cccChHHHHHHhhhcCCeEEEeccccccccc-------e---eeee-cc-
Q psy10669 120 -------NNA---RFD--FLSSG-TTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA-------G---VKGV-TK- 173 (337)
Q Consensus 120 -------~~a---~pk--lII~~-~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T-~~- 173 (337)
++. +++ .|+++ ++.++ ...|+++|.++|+++|++++||.||..|+++ | +++. ||
T Consensus 626 iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKt 705 (954)
T PRK12566 626 VDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKT 705 (954)
T ss_pred cCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcc
Confidence 111 133 34444 55555 5667999999999999999999999987776 1 3333 32
Q ss_pred ----C--Cchhhh------hHHHHHhhccCCCC--------CCCC-----cHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Q psy10669 174 ----T--GEKILY------DYEEKINNAVFPSL--------QGGP-----HNHAIGAIATAMLQAQSDEFKSYQAQVKAN 228 (337)
Q Consensus 174 ----~--Gg~i~~------~l~~~i~~~~~p~~--------~g~~-----~~~~iaala~a~~e~~~~~~~~y~~~v~~n 228 (337)
. ||..++ .+.+.+.. .|+. .|+- +...++-.+.....++-++.++-+++-+.|
T Consensus 706 f~~P~G~GGP~vG~iav~~~L~pfLp~--~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailn 783 (954)
T PRK12566 706 FCIPHGGGGPGMGPIGVRAHLAPFVAN--HPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADASEVAILS 783 (954)
T ss_pred cCcCccCCCCccchhhhhhhhhhhccC--CCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 2 344433 23333332 1210 1111 111223333333333323333444455779
Q ss_pred HHHHHHHHHhCCCEEecCCC-CC--eEEEEEecC----CCcchHHHHHHHhhcCceeccCc-----ccchh
Q psy10669 229 ASHLSDEMIKRGYHVVTGGT-DV--HLILIDLRK----NKLTGSKVELVLEEIAIACNKNT-----GISLA 287 (337)
Q Consensus 229 a~~l~~~L~~~G~~v~~~~t-~~--h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~~~-----girig 287 (337)
++|++++|.+ ++.+...+. .. |-..+++.. .+.+..++.++|.++||.+.-.. ++||.
T Consensus 784 AnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIe 853 (954)
T PRK12566 784 ANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVE 853 (954)
T ss_pred HHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEE
Confidence 9999999987 677665221 13 777777762 34677889999999899765321 56664
No 148
>PRK12414 putative aminotransferase; Provisional
Probab=98.74 E-value=3.5e-06 Score=82.61 Aligned_cols=257 Identities=14% Similarity=0.169 Sum_probs=143.4
Q ss_pred hhhhcHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 11 LAQTDPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
+...-+.+...+..- ..+...|+|-..++.. ++.+.+++...+... ...|+...-..++.....+.++++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~ 82 (384)
T PRK12414 11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDG-------HNQYAPMAGIAALREALAEKTERL 82 (384)
T ss_pred cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhC-------CCCcCCCCCcHHHHHHHHHHHHHH
Confidence 333444555555432 2344567777766655 788888887643321 112322222334444445677888
Q ss_pred cCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccc--
Q psy10669 89 FNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNA-- 122 (337)
Q Consensus 89 fg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a-- 122 (337)
+|.+.... .++..++| +++...++.+++.+ +..
T Consensus 83 ~g~~~~~~-~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 161 (384)
T PRK12414 83 YGARYDPA-SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP 161 (384)
T ss_pred hCCCCCCC-CcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc
Confidence 89752100 14666666 67777777888654 101
Q ss_pred cccEEEEcCccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC
Q psy10669 123 RFDFLSSGTTCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG 175 (337)
Q Consensus 123 ~pklII~~~S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G 175 (337)
++|+|++..-++ +.. -++++|.++|+++|+++++|+++.--... .++.+. | .|
T Consensus 162 ~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG 241 (384)
T PRK12414 162 RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG 241 (384)
T ss_pred ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc
Confidence 267777752233 343 35667778889999999999998532111 112222 2 12
Q ss_pred ---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669 176 ---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV 250 (337)
Q Consensus 176 ---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~ 250 (337)
|+++. ++.+.+.....-... +.+.+...++...+.. ...+.+.++++.++.+.+.+.|.+.|+.+... ..+
T Consensus 242 lRiG~~v~~~~l~~~l~~~~~~~~~-~~s~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~gg 317 (384)
T PRK12414 242 WRVGYCLAPAELMDEIRKVHQFMVF-SADTPMQHAFAEALAE--PASYLGLGAFYQRKRDLLARELAGSRFELLPS-EGS 317 (384)
T ss_pred ceEEEEecCHHHHHHHHHHHhheec-CCCcHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-Ccc
Confidence 66654 455555443211112 2233344444333322 12234556778888899999999999887642 234
Q ss_pred eEEEEEecC--CCcchHHHHHHHhhcCceecc
Q psy10669 251 HLILIDLRK--NKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 251 h~v~V~~~~--~~~~~~~~~~~L~~~gI~v~~ 280 (337)
-.+++++.. ...+...+.+.|++.||.+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~p 349 (384)
T PRK12414 318 FFMLARFRHFSDESDSDFVLRLIRDARVATIP 349 (384)
T ss_pred eEEEEcccccCCCCHHHHHHHHHHhCCEEEec
Confidence 455667654 122445555778888999886
No 149
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=98.73 E-value=1.7e-07 Score=91.91 Aligned_cols=154 Identities=15% Similarity=0.119 Sum_probs=101.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+++| +++++++|.++ .+.++||+.|..+++. ++++
T Consensus 45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 114 (378)
T TIGR01329 45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVV 114 (378)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEE
Confidence 555667787 57889999975 6888999888666655 6553
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|++++||.+|.+|+.. | + .+.+|
T Consensus 115 ~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l 194 (378)
T TIGR01329 115 HVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFL 194 (378)
T ss_pred EeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceec
Confidence 111 26888776 434 357889999999999999999999999888754 1 2 22222
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||+++. ++.+++.+... ..|+...+.-+.+. +..+ .....+.++-.+|+..+++.|.+.
T Consensus 195 ~G~~~~~~G~v~~~~~~~~~~~~~~~~--~~G~~~~~~~a~l~--~~~l--~tl~~R~e~~~~na~~la~~L~~~ 263 (378)
T TIGR01329 195 AGHSDVMAGVLAVKGEEIAKKVYFLQN--STGSGLAPFDCWLL--LRGI--KTLAIRIEKQQENARAIAMFLSTH 263 (378)
T ss_pred cCCccceeEEEEeCcHHHHHHHHHHHH--hcCCcCCHHHHHHH--HccC--CCHHHHHHHHHHHHHHHHHHHHhC
Confidence 1566644 35455554322 12233333333321 2222 356788999999999999999873
No 150
>PLN02624 ornithine-delta-aminotransferase
Probab=98.73 E-value=2.1e-06 Score=86.74 Aligned_cols=227 Identities=18% Similarity=0.173 Sum_probs=127.4
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----- 117 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----- 117 (337)
+|.|.+|+...+. ++..++ ++++ +....+++ ++++++|+.+. .+..+||+.||.++++-..
T Consensus 93 ~p~v~~ai~~ql~-~~~~~~--~~~~--~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAE-KLTLSS--RAFY--NDKFPEFA----EYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHH-hcCCcc--cccC--CHHHHHHH----HHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 9999999987754 443322 2222 22223333 57778888653 4667899999987764110
Q ss_pred -------Cc-----------------------------------------------c--cc----cccEEEEcCccc---
Q psy10669 118 -------PT-----------------------------------------------N--NA----RFDFLSSGTTCY--- 134 (337)
Q Consensus 118 -------~~-----------------------------------------------~--~a----~pklII~~~S~~--- 134 (337)
+. + +. +...||+.+ ..
T Consensus 159 ~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEp-v~~~~ 237 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEP-IQGEA 237 (474)
T ss_pred hcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECC-ccCCC
Confidence 00 0 00 124566652 33
Q ss_pred ccccC----hHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc--CCchh-h----h--hHHHHHh
Q psy10669 135 SRCLD----YARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK--TGEKI-L----Y--DYEEKIN 187 (337)
Q Consensus 135 ~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~--~Gg~i-~----~--~l~~~i~ 187 (337)
+...+ +++|+++|+++|++|++|++|+ |+- + + +...+| .||++ + . ++.+.+.
T Consensus 238 G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~ 316 (474)
T PLN02624 238 GVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIK 316 (474)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhc
Confidence 33445 8889999999999999999997 531 1 1 011122 13322 2 1 3434343
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CE-Eec-CCCCCeEEEEEecCCC--
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YH-VVT-GGTDVHLILIDLRKNK-- 261 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~-v~~-~~t~~h~v~V~~~~~~-- 261 (337)
+......+ +.++...++..+++..+.+ .+..+++.++.++|++.|.+.. +. ++. -.....+..|.+....
T Consensus 317 ~~~~~~T~-~g~pl~~aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~ 392 (474)
T PLN02624 317 PGEHGSTF-GGNPLASAVAMAALQVVQD---EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLG 392 (474)
T ss_pred cCCcCCCC-CCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcC
Confidence 32221222 3566666666666655532 2456677788888888887732 22 111 0023445566665422
Q ss_pred -cchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 262 -LTGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 262 -~~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
....++.+.|.+.||.+.+.. .|||..+
T Consensus 393 ~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~ 423 (474)
T PLN02624 393 PVSAYDVCLKLKERGLLAKPTHDTIIRLAPP 423 (474)
T ss_pred hHHHHHHHHHHHhCCeEEecCCCCEEEEECC
Confidence 234567777888999997643 5788643
No 151
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.72 E-value=1.6e-07 Score=93.87 Aligned_cols=88 Identities=16% Similarity=0.045 Sum_probs=70.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|.++ ++.+.||+.|+.+++.+++++
T Consensus 67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~ 137 (436)
T PRK07812 67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVS 137 (436)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEE
Confidence 456667888 58899999986 699999999998888988754
Q ss_pred -----------ccc---cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 120 -----------NNA---RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 120 -----------~~a---~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+.+ ++++|++...+ .+...|+++|.++|+++|++++||++|.+|+..
T Consensus 138 ~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~ 200 (436)
T PRK07812 138 FVEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI 200 (436)
T ss_pred EECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 001 25778776333 368899999999999999999999999988665
No 152
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=98.71 E-value=4.3e-06 Score=81.96 Aligned_cols=225 Identities=15% Similarity=0.088 Sum_probs=139.3
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS- 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt- 106 (337)
..-|.|-..||.. +|.|++++... .. . +.|... ...++ ++.+++++|.++ .+|.+++|+
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~-~~--~------~~Yp~~-~~~~l----r~~ia~~~~~~~----~~I~~t~Ga~ 113 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNM-KF--P------YVYPDP-ESRRL----RAALAEDSGLES----ENILVGCGAD 113 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhh-Hh--h------ccCCCC-CHHHH----HHHHHHHhCcCh----hhEEEcCCHH
Confidence 3557777777764 88898888532 11 0 112211 12333 467889999876 368899995
Q ss_pred hhHHHHHHhhCCc------------------------------------------c-c--ccccEEEEcCccc--ccccC
Q psy10669 107 PANFAVCEKALPT------------------------------------------N-N--ARFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 107 ~AN~~v~~aLl~~------------------------------------------~-~--a~pklII~~~S~~--~~~~d 139 (337)
++...++.+++++ + . .++|+|++..-++ +...|
T Consensus 114 ~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~ 193 (380)
T PLN03026 114 ELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIIS 193 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Confidence 5766666777543 0 0 1267777653233 58889
Q ss_pred hHHHHHHhhhcCCeEEEeccccc----c----ccc-----eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHIS----G----LIA-----GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQG 196 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~----G----li~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g 196 (337)
.+++.+|++.. +++++|+++.- + .+. .+..|. | .| |++++ ++.+.+.....|.
T Consensus 194 ~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~~--- 269 (380)
T PLN03026 194 DDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--- 269 (380)
T ss_pred HHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCCC---
Confidence 99999999865 89999999731 1 111 123333 2 23 77765 5666666544442
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC-EEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY-HVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~-~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
+.+.+...+...++.. ....++.++++.++-+++.+.|.+.|+ .+.. +.+..+++.+.. +.+..++.+.|.+.|
T Consensus 270 ~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~~~f~~~~~~~-~~~~~~~~~~l~~~g 344 (380)
T PLN03026 270 NVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYP--SDANFILCRVTS-GRDAKKLKEDLAKMG 344 (380)
T ss_pred CCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECC--CCCeEEEEECCC-CCCHHHHHHHHHHCC
Confidence 2344444444444432 123356677888888889999988764 4433 556677777654 346778888888889
Q ss_pred ceeccC
Q psy10669 276 IACNKN 281 (337)
Q Consensus 276 I~v~~~ 281 (337)
|.+...
T Consensus 345 I~v~~~ 350 (380)
T PLN03026 345 VMVRHY 350 (380)
T ss_pred eEEEEC
Confidence 998753
No 153
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=98.71 E-value=1.7e-06 Score=84.64 Aligned_cols=193 Identities=13% Similarity=0.061 Sum_probs=116.4
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-------------------------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT------------------------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~------------------------------- 119 (337)
...+++| +.+++++|.++ .+.++||+.|...++.++ +++
T Consensus 31 ~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d 101 (375)
T PRK11706 31 GFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIR 101 (375)
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 3446676 46678899875 466677788865544544 332
Q ss_pred -----------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEecccccccc-c----------eeeeec--
Q psy10669 120 -----------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-A----------GVKGVT-- 172 (337)
Q Consensus 120 -----------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-~----------g~~~T~-- 172 (337)
+.+ ++|+|++.+ .++...|+++|.++|+++|++++.|+||+.|.. . ++.|.+
T Consensus 102 ~~~~~~d~~~le~~i~~~tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~ 180 (375)
T PRK11706 102 PDTMNIDETLIEAAITPKTRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET 180 (375)
T ss_pred CCcCCcCHHHHHHhcCCCCeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCC
Confidence 111 268888763 568889999999999999999999999998863 2 111211
Q ss_pred c-----CCchhhh---hHHHHHhhccCCC------------------CCCCCc-HHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669 173 K-----TGEKILY---DYEEKINNAVFPS------------------LQGGPH-NHAIGAIATAMLQAQSDEFKSYQAQV 225 (337)
Q Consensus 173 ~-----~Gg~i~~---~l~~~i~~~~~p~------------------~~g~~~-~~~iaala~a~~e~~~~~~~~y~~~v 225 (337)
| .||.++. ++.+++......+ ...+.. ....|++..+ ++ ...++..++-
T Consensus 181 K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~--ql--~~l~~~~~~R 256 (375)
T PRK11706 181 KNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWA--QL--EAADRINQRR 256 (375)
T ss_pred ccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHH--HH--HHHHHHHHHH
Confidence 2 2555543 3554333211100 111222 2334444333 32 2345666777
Q ss_pred HHHHHHHHHHHHhC---C-CEEec--CC--CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 226 KANASHLSDEMIKR---G-YHVVT--GG--TDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 226 ~~na~~l~~~L~~~---G-~~v~~--~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
.+|++.+.+.|... | +.+.. ++ ...|+.++.+.+. .+..++.+.|.+.||.+.
T Consensus 257 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~l~~~L~~~gI~~~ 317 (375)
T PRK11706 257 LALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-EDRSALINFLKEAGIMAV 317 (375)
T ss_pred HHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-CCHHHHHHHHHHCCCCcc
Confidence 78888888888764 2 33221 11 2356777777543 367888899999999875
No 154
>PRK08064 cystathionine beta-lyase; Provisional
Probab=98.71 E-value=8.3e-07 Score=87.46 Aligned_cols=195 Identities=12% Similarity=0.107 Sum_probs=124.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|+++ ++.+.||+.|...++. ++++
T Consensus 52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~ 121 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHT 121 (390)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEE
Confidence 345567787 58899999885 6888999988777665 4432
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|++++||++|..++.. | + .+.+|
T Consensus 122 ~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~ 201 (390)
T PRK08064 122 FVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFL 201 (390)
T ss_pred EECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceec
Confidence 001 26888776 433 468899999999999999999999999887643 1 2 23222
Q ss_pred ---C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-C-E
Q psy10669 174 ---T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-Y-H 242 (337)
Q Consensus 174 ---~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~-~ 242 (337)
. +|+++. ++.++++....+ .|....+.-+.+ .+..+ .....++++..+|+..+++.|.+.+ + +
T Consensus 202 ~G~~~~laG~~v~~~~~~~~~l~~~~~~--~g~~~~~~~a~l--~~~gl--~tl~~R~~~~~~~a~~la~~L~~~~~v~~ 275 (390)
T PRK08064 202 AGHSDVLAGLAVVKDEELAQKLYFLQNS--FGAVLGVQDCWL--VLRGL--KTLHVRLEHSSETANKIALYLQEHPKVQN 275 (390)
T ss_pred cCCccceeEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHH--HHccc--CcHHHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 1 365543 466666654332 233333444443 22333 2356888999999999999999853 1 2
Q ss_pred EecCCC---------------CCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchh
Q psy10669 243 VVTGGT---------------DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLA 287 (337)
Q Consensus 243 v~~~~t---------------~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig 287 (337)
|+..+- -.-++.+.++ + ...+.+.++..++... |+++|
T Consensus 276 v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--~--~~~~~~f~~~l~l~~~---~~s~G 328 (390)
T PRK08064 276 VYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--S--EEAVRQFVSHVKLPVF---AVSLG 328 (390)
T ss_pred EECCCCCCCccHHHHHHhCCCcceEEEEEEC--C--HHHHHHHHHhCCcceE---cccCC
Confidence 332211 1225555553 3 3467788888777554 56776
No 155
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=98.70 E-value=4.2e-07 Score=89.55 Aligned_cols=189 Identities=14% Similarity=0.094 Sum_probs=118.5
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++....++| +++++++|.++ ++.+.||+.|+..++.+++++
T Consensus 59 ~~p~~~~Le----~~lA~~~g~~~-----~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~ 129 (388)
T PRK07811 59 GNPTRTALE----EQLAALEGGAY-----GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYT 129 (388)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEE
Confidence 345567777 58899999986 688899999999999998754
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---eeee-c---
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VKGV-T--- 172 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~~T-~--- 172 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|... + ++++ .
T Consensus 130 ~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l 209 (388)
T PRK07811 130 PVDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYI 209 (388)
T ss_pred EeCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceee
Confidence 101 26888875 433 247889999999999999999999999988753 1 2222 2
Q ss_pred --c---CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-
Q psy10669 173 --K---TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH- 242 (337)
Q Consensus 173 --~---~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~- 242 (337)
| .||+++. ++.+++..... ..|....+.-+. .++..+ .....+.++..+|++.+++.|.+. ++.
T Consensus 210 ~g~~~~~gG~vv~~~~~l~~~~~~~~~--~~g~~~s~~~a~--l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~ 283 (388)
T PRK07811 210 GGHSDVVGGALVTNDEELDEAFAFLQN--GAGAVPGPFDAY--LTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVST 283 (388)
T ss_pred cCCCCcEEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHH--HHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence 2 2565553 35554442211 112222222222 233333 245678888999999999999984 554
Q ss_pred EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 243 VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 243 v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
|..++..+| ++.+.+. + +...+.+.++...+
T Consensus 284 V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~~ 329 (388)
T PRK07811 284 VLYPGLPSHPGHEVAARQMRGFGGMVSVRLA--G-GEEAARDFCARTKV 329 (388)
T ss_pred EECCCCCCCchHHHHHHhcCCCCceEEEEeC--C-CHHHHHHHHHhCCc
Confidence 333333333 5555554 2 33455566665444
No 156
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.69 E-value=4.5e-07 Score=90.65 Aligned_cols=121 Identities=12% Similarity=0.036 Sum_probs=84.7
Q ss_pred eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669 33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112 (337)
Q Consensus 33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v 112 (337)
-.+..|..|..+.+.+++... .... .++.-+|. ++...+.+| +++++++|+++ .|.|+||+.|+.++
T Consensus 34 ~Pi~~sstf~~~~~~~~~~~~-~~~~-~~~~Y~r~--~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~a 100 (437)
T PRK05613 34 LPIYQTTSYVFDSAEHAKQRF-ALED-LGPIYSRL--TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAA 100 (437)
T ss_pred CCEeCCCCcccCCHHHHHHhh-cccc-CCceeeCc--cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHH
Confidence 347778888877777665421 1111 12222222 456667777 58899999975 79999999998888
Q ss_pred HHhhCCc--------------------------------c---------cc---cccEEEEc-Cccc-ccccChHHHHHH
Q psy10669 113 CEKALPT--------------------------------N---------NA---RFDFLSSG-TTCY-SRCLDYARFRQI 146 (337)
Q Consensus 113 ~~aLl~~--------------------------------~---------~a---~pklII~~-~S~~-~~~~d~~~l~ei 146 (337)
+.+++++ . .+ ++|+|++. .++. +...|+++|.++
T Consensus 101 l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~l 180 (437)
T PRK05613 101 ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEV 180 (437)
T ss_pred HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHH
Confidence 8888654 0 01 16777774 3332 468999999999
Q ss_pred hhhcCCeEEEeccccccccc
Q psy10669 147 CDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~Gli~ 166 (337)
|+++|++++||.+|..|..-
T Consensus 181 a~~~gi~livD~t~a~g~~~ 200 (437)
T PRK05613 181 AHRNQVPLIVDNTIATAALV 200 (437)
T ss_pred HHHcCCeEEEECCCcccccc
Confidence 99999999999999988654
No 157
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=98.69 E-value=4.1e-07 Score=87.71 Aligned_cols=158 Identities=16% Similarity=0.192 Sum_probs=99.1
Q ss_pred cEEEEc-Ccc-cccccChHHHHHH---hhhcCCeEEEeccccccccc-----------------eeeeec-c----CC--
Q psy10669 125 DFLSSG-TTC-YSRCLDYARFRQI---CDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG-- 175 (337)
Q Consensus 125 klII~~-~S~-~~~~~d~~~l~ei---a~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G-- 175 (337)
++|++. +.+ .+...+.+++.+| |+++|.++++|++|.....+ .++.+. | .|
T Consensus 150 ~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlR 229 (363)
T PF00155_consen 150 KAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLR 229 (363)
T ss_dssp EEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGT
T ss_pred ceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccc
Confidence 556654 222 3567777777766 99999999999999875555 122332 2 25
Q ss_pred -chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669 176 -EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ--SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV 250 (337)
Q Consensus 176 -g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~--~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~ 250 (337)
|++++ ++.+.+.....++.. +.+..++++..+..-. ....++.++++.++.+.|.+.|.+.|+.+..+. .+
T Consensus 230 vG~i~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~ 305 (363)
T PF00155_consen 230 VGYIVAPPELIERLRRFQRSGLS---SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPE-AG 305 (363)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHS-BS
T ss_pred cccccchhhhhhhhhhccccccc---cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeecc-Cc
Confidence 77765 566666654333333 2233333333333322 125578899999999999999999999998632 45
Q ss_pred eEEEEEecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669 251 HLILIDLRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA 288 (337)
Q Consensus 251 h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~ 288 (337)
..+++.+... +..++.+.|.+ .||.+.+-. .|||+.
T Consensus 306 ~~~~~~~~~~--~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~ 348 (363)
T PF00155_consen 306 FFLWVRLDPN--DAEELAQELLEEYGILVRPGSYFGVPGYIRISL 348 (363)
T ss_dssp SEEEEEESHH--HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG
T ss_pred cEEEEEcccc--hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe
Confidence 5555655543 45666677776 499998733 577765
No 158
>PRK07550 hypothetical protein; Provisional
Probab=98.68 E-value=9.4e-06 Score=79.42 Aligned_cols=252 Identities=12% Similarity=0.045 Sum_probs=138.8
Q ss_pred HHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669 17 ELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE 94 (337)
Q Consensus 17 ~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~ 94 (337)
++.+...+.+......+.|-.+++-. ++.+.+++.+.+.+.. ...|....-..++.....+.+.+.+|....
T Consensus 16 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~ 89 (386)
T PRK07550 16 EVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPA------AHLYGPVEGLPELREAYAAHYSRLYGAAIS 89 (386)
T ss_pred HHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcC------CcCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 33333333333344567777777544 6778887776542111 111221111234543334566666664322
Q ss_pred CCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------ccc-----cccEE
Q psy10669 95 QWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------NNA-----RFDFL 127 (337)
Q Consensus 95 ~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~a-----~pklI 127 (337)
. -+|.+++| ++|...++.+++++ .+. ++++|
T Consensus 90 ~--~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v 167 (386)
T PRK07550 90 P--EQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAI 167 (386)
T ss_pred c--ceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEE
Confidence 1 26888888 56877777888653 000 15664
Q ss_pred EE-cCcc-cccccC---hHHHHHHhhhcCCeEEEeccccc---------cccc--------eeeeec-c-------CCch
Q psy10669 128 SS-GTTC-YSRCLD---YARFRQICDETDSIMFADMSHIS---------GLIA--------GVKGVT-K-------TGEK 177 (337)
Q Consensus 128 I~-~~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~---------Gli~--------g~~~T~-~-------~Gg~ 177 (337)
++ .+++ .+...+ .++|.++|+++|+++++|+++.- .++. .+.++. | +.|+
T Consensus 168 ~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 247 (386)
T PRK07550 168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA 247 (386)
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence 44 4443 234444 56778899999999999998641 1111 011221 2 2477
Q ss_pred hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEE
Q psy10669 178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLIL 254 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~ 254 (337)
+++ ++.+.+.....+... +++.....+++.++..+ ...-++.++++.++.+.+.+.|.+. ++.+.. +....++
T Consensus 248 i~~~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~g~~~~~ 323 (386)
T PRK07550 248 VVASPARIAEIEKFMDTVAI-CAPRIGQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPGWELLA--SGAYFAY 323 (386)
T ss_pred eecCHHHHHHHHHHHhhccc-CCCcHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCC--CceEEEE
Confidence 765 455555544332222 23333434444444332 1122345667788888898998884 776543 4456677
Q ss_pred EEecCCCcchHHHHHHH-hhcCceecc
Q psy10669 255 IDLRKNKLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 255 V~~~~~~~~~~~~~~~L-~~~gI~v~~ 280 (337)
+.+...+.+..++...| ++.||.+.+
T Consensus 324 ~~~~~~~~~~~~l~~~l~~~~gv~v~p 350 (386)
T PRK07550 324 VRHPFPDRPSREVARRLAKEAGILCLP 350 (386)
T ss_pred ecCCCCCCCHHHHHHHHHHhcCEEEeC
Confidence 77655355777877765 568999876
No 159
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.68 E-value=4e-06 Score=81.76 Aligned_cols=234 Identities=11% Similarity=0.043 Sum_probs=143.0
Q ss_pred ceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669 32 GIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109 (337)
Q Consensus 32 ~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN 109 (337)
.++|-..||.. +|.+.+++...+... .+|+- .. ..+++ +.++++++.+. .+|.+++|+..+
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~------~~-~~~Lr----~~ia~~~~~~~----~~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEI--WKYGD------PE-NHDLR----HALAAHHGVAP----ENIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCC------Cc-cHHHH----HHHHHHhCCCH----HHEEEcCCHHHH
Confidence 35777777776 889999987653211 12221 11 23444 67788898875 379999997654
Q ss_pred H-HHHHhhCCc-----------------------------------------ccc---cccEEEEcCccc--ccccChHH
Q psy10669 110 F-AVCEKALPT-----------------------------------------NNA---RFDFLSSGTTCY--SRCLDYAR 142 (337)
Q Consensus 110 ~-~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~~--~~~~d~~~ 142 (337)
+ .++.+++++ +.. ++++|++..-.+ +...+.++
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~ 176 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAAD 176 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHH
Confidence 4 444555543 011 267777743344 57778888
Q ss_pred HHHHhhhc--CCeEEEeccccc----cccc---------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669 143 FRQICDET--DSIMFADMSHIS----GLIA---------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 143 l~eia~~~--ga~l~vD~AH~~----Gli~---------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~ 197 (337)
+.++++.. |.+|++|+++.- |-.. .+.+|. | .| |++++ ++.+.+.....+ . +
T Consensus 177 l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~--~-~ 253 (369)
T PRK08153 177 IVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH--F-G 253 (369)
T ss_pred HHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC--C-C
Confidence 88776543 899999999752 1011 122332 2 13 67765 566655543322 2 3
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
.+.+..+++..++.. ....++.++.+.++-+.+.+.|++.|+.+.. +.+..++++++.......++.+.|.+.||.
T Consensus 254 ~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p--~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~ 329 (369)
T PRK08153 254 MNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLP--SATNFVAIDCGRDGAFARAVLDGLIARDIF 329 (369)
T ss_pred CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CcCcEEEEECCCCcccHHHHHHHHHHCCeE
Confidence 556666666565532 1223556777778888888889888987654 556678888764344566777777788999
Q ss_pred ec-cC-----cccchhhh
Q psy10669 278 CN-KN-----TGISLAAE 289 (337)
Q Consensus 278 v~-~~-----~girig~~ 289 (337)
+. +. ..+||+..
T Consensus 330 v~~p~~~~~~~~iRis~~ 347 (369)
T PRK08153 330 VRMPGVAPLDRCIRVSCG 347 (369)
T ss_pred EeeCCCCCCCCeEEEecC
Confidence 95 21 15777643
No 160
>PRK07682 hypothetical protein; Validated
Probab=98.67 E-value=2.2e-05 Score=76.59 Aligned_cols=238 Identities=15% Similarity=0.066 Sum_probs=134.3
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC--CCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD--PEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~--~~~~~~~v~~~Sg 105 (337)
...|+|-..++-. ++.+.+++...+.+.+ .+| ....-..++.....+.+.+.+|.+ .+ -+|.+++|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~~---~~i~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TSY------TANAGLLELRQEIAKYLKKRFAVSYDPN---DEIIVTVG 89 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCcHHHHHHHHHHHHHHhCCCCCCC---CcEEEeCC
Confidence 3568888888866 5567787765433211 122 111222334322223444444542 21 14778887
Q ss_pred -chhHHHHHHhhCCc-------------------------------------------ccc---cccEEEE-cCcc-ccc
Q psy10669 106 -SPANFAVCEKALPT-------------------------------------------NNA---RFDFLSS-GTTC-YSR 136 (337)
Q Consensus 106 -t~AN~~v~~aLl~~-------------------------------------------~~a---~pklII~-~~S~-~~~ 136 (337)
++|+..++.+++++ +.+ ++++|++ .+.+ .+.
T Consensus 90 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~ 169 (378)
T PRK07682 90 ASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGA 169 (378)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCc
Confidence 67888888888754 000 2566644 3422 234
Q ss_pred ccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669 137 CLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKIN 187 (337)
Q Consensus 137 ~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~ 187 (337)
..+ +++|.++|+++++++++|+++.-.... .+.+|. | .| |+++. ++.+.+.
T Consensus 170 ~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~ 249 (378)
T PRK07682 170 VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAML 249 (378)
T ss_pred CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHH
Confidence 443 667778899999999999997643221 112232 2 24 66665 4666554
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV 267 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~ 267 (337)
........ +++....++...++..- ....++.+++..++.+++.+.|.+.|+++..+ ..+..+++.+...+.+..++
T Consensus 250 ~~~~~~~~-~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~g~~~~~~~~~~~~~~~~~~ 326 (378)
T PRK07682 250 KIHQYSMM-CAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVP-GGAFYAFPSISSTGLSSEEF 326 (378)
T ss_pred HHHHhhcc-CCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-CeeEEEEEeccCCCCCHHHH
Confidence 33221112 23334444444444321 12345667888899999999999999876542 23445566665445566667
Q ss_pred HHHH-hhcCceecc
Q psy10669 268 ELVL-EEIAIACNK 280 (337)
Q Consensus 268 ~~~L-~~~gI~v~~ 280 (337)
.+.| ++.||.+.+
T Consensus 327 ~~~ll~~~gv~v~p 340 (378)
T PRK07682 327 AEQLLLEEKVAVVP 340 (378)
T ss_pred HHHHHHhCCEEEcC
Confidence 7665 568999886
No 161
>PLN02509 cystathionine beta-lyase
Probab=98.63 E-value=7.6e-07 Score=89.62 Aligned_cols=156 Identities=14% Similarity=0.063 Sum_probs=98.3
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| +++++++|.+. .+.++||+.|..++ ..++++
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~i-l~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~ 200 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSAV-THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVK 200 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHHH-HHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEE
Confidence 566667888 47788999875 58889998775444 455543
Q ss_pred ----------ccc---cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--
Q psy10669 120 ----------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~-- 173 (337)
+.+ ++|+|++. +++. +...|+++|.++|+++|++++||+||..|+.. .++++. |
T Consensus 201 ~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l 280 (464)
T PLN02509 201 RVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFI 280 (464)
T ss_pred EeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccc
Confidence 111 25777775 3332 47788889999999999999999999999865 123322 2
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY 241 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~ 241 (337)
.||++.. .+.+.+.... ...|+...|.-|++.. ..+ .....+.++..+|++++++.|.+. .+
T Consensus 281 ~G~gdv~gG~v~~~~~~l~~~~~~~~--~~~g~~l~p~~A~l~l--r~L--~tL~~R~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 281 AGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLCL--RGI--KTMALRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred cCCCccceeEEEeccHHHHHHHHHHH--HhcCCCcCHHHHHHHH--hhh--hhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 1566653 2333322110 1112333333343332 233 234678999999999999999873 44
No 162
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.63 E-value=9.7e-06 Score=79.14 Aligned_cols=226 Identities=14% Similarity=0.112 Sum_probs=140.6
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
..|.|-..||-. +|.+++++...+.+. ..||.. | ..+ .++.+++++|++. -+|.+++| ++
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~--~~Yp~~----g---~~~----Lr~aia~~~~~~~----~~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDH--ALYPDG----G---ATT----LRQTIANKLHVKM----EQVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhc--CcCCCC----C---HHH----HHHHHHHHhCCCc----ceEEECCCHHH
Confidence 457888888876 889999987654321 012211 1 122 3467788899886 36888899 56
Q ss_pred hHHHHHHhhCCc--------------------------------------cc--c---cccEEEEc-Ccc-cccccChHH
Q psy10669 108 ANFAVCEKALPT--------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYAR 142 (337)
Q Consensus 108 AN~~v~~aLl~~--------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~~ 142 (337)
+...++.+++++ .+ + ++++|++. +.+ .+...+.++
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~ 172 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRK 172 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHH
Confidence 777777888654 01 1 25766655 433 257788877
Q ss_pred HHHHhh---hcCCeEEEecccccccc---------c--------eeeeec-c-------CCchhhh--hHHHHHhhccCC
Q psy10669 143 FRQICD---ETDSIMFADMSHISGLI---------A--------GVKGVT-K-------TGEKILY--DYEEKINNAVFP 192 (337)
Q Consensus 143 l~eia~---~~ga~l~vD~AH~~Gli---------~--------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p 192 (337)
+.+|++ ++ .++++|+++. .+. . .+..|. | +-|++++ ++.+.+.....|
T Consensus 173 l~~l~~~~~~~-~~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~~ 250 (366)
T PRK01533 173 LTQFIEGISEN-TLIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRLP 250 (366)
T ss_pred HHHHHHhCCCC-CEEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcCC
Confidence 776654 44 4788899974 221 1 122332 2 1266665 566666654333
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
.+.+.....++..++. ..++ ++.++...++.+.+.+.|.+.|+++.. ++..-+++.+. ++.++.+.|
T Consensus 251 ---~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~--~~~nf~~~~~~----~~~~~~~~l 318 (366)
T PRK01533 251 ---FNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPFYQ--SQTNFIFLPVE----NGGEIYEAC 318 (366)
T ss_pred ---CCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCccCC--CcCcEEEEeCC----CHHHHHHHH
Confidence 2445555555555553 2233 455677777888888888888988765 45556777763 356788888
Q ss_pred hhcCceeccCc-ccchh
Q psy10669 272 EEIAIACNKNT-GISLA 287 (337)
Q Consensus 272 ~~~gI~v~~~~-girig 287 (337)
.+.||.|.... +|||+
T Consensus 319 ~~~GI~Vr~~~~~iRis 335 (366)
T PRK01533 319 AHAGFIIRPFPNGVRIT 335 (366)
T ss_pred HHCCcEEccCCCceEEe
Confidence 89999998643 78884
No 163
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.63 E-value=6.9e-07 Score=95.79 Aligned_cols=201 Identities=12% Similarity=0.116 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC---------c--------------------------
Q psy10669 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP---------T-------------------------- 119 (337)
Q Consensus 75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~---------~-------------------------- 119 (337)
.+++...++-+++++|.+. +.+++.+|++++.+.+.++-. +
T Consensus 529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~ 604 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVP 604 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEE
Confidence 3566666678999999996 689999999999865555521 1
Q ss_pred ----------------cc----ccccEEEEc-CcccccccC-hHHHHHHhhhcCCeEEEeccccccccc----------e
Q psy10669 120 ----------------NN----ARFDFLSSG-TTCYSRCLD-YARFRQICDETDSIMFADMSHISGLIA----------G 167 (337)
Q Consensus 120 ----------------~~----a~pklII~~-~S~~~~~~d-~~~l~eia~~~ga~l~vD~AH~~Gli~----------g 167 (337)
.. .++++|+++ +|.++...| +++|.++||++|+.++||.||..++.. .
T Consensus 605 V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi 684 (939)
T TIGR00461 605 VNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADV 684 (939)
T ss_pred eccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCE
Confidence 11 125677766 677775545 999999999999999999999876655 1
Q ss_pred eeeeccC--------C----chhhh--hHHHHHhhc-c--------CC---CCCCC-CcHH-HHHHHHHHHHHHh-chhh
Q psy10669 168 VKGVTKT--------G----EKILY--DYEEKINNA-V--------FP---SLQGG-PHNH-AIGAIATAMLQAQ-SDEF 218 (337)
Q Consensus 168 ~~~T~~~--------G----g~i~~--~l~~~i~~~-~--------~p---~~~g~-~~~~-~iaala~a~~e~~-~~~~ 218 (337)
++++.|| | |++.. ++...+-.. + .+ +..++ +... .++-.+.....++ ...+
T Consensus 685 ~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL 764 (939)
T TIGR00461 685 CHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGL 764 (939)
T ss_pred EEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHH
Confidence 3443322 1 45543 232211100 0 00 01111 1112 1222222222222 3446
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEecCC---CCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669 219 KSYQAQVKANASHLSDEMIKRGYHVVTGG---TDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 219 ~~y~~~v~~na~~l~~~L~~~G~~v~~~~---t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~ 280 (337)
++..++-+.||+||+++|.+ ++++...+ .--|-++++++. .|....++.++|.++||....
T Consensus 765 ~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt 832 (939)
T TIGR00461 765 PKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPT 832 (939)
T ss_pred HHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccc
Confidence 77888899999999999987 78877632 234678888873 356788899999999997643
No 164
>PRK05764 aspartate aminotransferase; Provisional
Probab=98.62 E-value=1.4e-05 Score=78.18 Aligned_cols=244 Identities=16% Similarity=0.095 Sum_probs=133.9
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg 105 (337)
.+-++|-..++-. ++.+.+++...+.+. ... |.......++.....+.+.+.+|. +. -++.+++|
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~i~~~~g 99 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDG-KTK------YTPAAGIPELREAIAAKLKRDNGLDYDP----SQVIVTTG 99 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCC------cCCCCChHHHHHHHHHHHHHHhCCCCCH----HHEEEeCC
Confidence 4456666555555 588888887654431 111 222222344543222333333343 32 24677777
Q ss_pred -chhHHHHHHhhCCc--------------------------------------------ccc--cccEEEEc-Ccc-ccc
Q psy10669 106 -SPANFAVCEKALPT--------------------------------------------NNA--RFDFLSSG-TTC-YSR 136 (337)
Q Consensus 106 -t~AN~~v~~aLl~~--------------------------------------------~~a--~pklII~~-~S~-~~~ 136 (337)
++|+..++.+++++ +.. ++++|++. +++ .+.
T Consensus 100 ~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~ 179 (393)
T PRK05764 100 AKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGA 179 (393)
T ss_pred cHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCc
Confidence 57887777887643 000 14666654 322 234
Q ss_pred cc---ChHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC---chhhh--hHHHH
Q psy10669 137 CL---DYARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG---EKILY--DYEEK 185 (337)
Q Consensus 137 ~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G---g~i~~--~l~~~ 185 (337)
.. ++++|.++|+++|+++++|++|...... .+.++. | .| |+++. ++.+.
T Consensus 180 ~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~ 259 (393)
T PRK05764 180 VYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKA 259 (393)
T ss_pred ccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHH
Confidence 43 4667778899999999999997532211 011221 2 23 66654 46555
Q ss_pred HhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC---
Q psy10669 186 INNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK--- 261 (337)
Q Consensus 186 i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~--- 261 (337)
+.....+. .++++.....+....+... ....++.+++..++.+.+.+.|.+. |+++..+ ..+..+++++....
T Consensus 260 ~~~~~~~~-~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~g~~~~~~~~~~~~~~~ 336 (393)
T PRK05764 260 MSKLQSHS-TSNPTSIAQYAAVAALNGP-QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP-EGAFYVFPNVSKLLGKS 336 (393)
T ss_pred HHHHHhhc-ccCCChHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-CcceEEEEecccccccc
Confidence 55432222 2233444444444444321 2334567778888999999999987 8887642 33455667775421
Q ss_pred -cchHHHHHH-HhhcCceeccCc------ccchh
Q psy10669 262 -LTGSKVELV-LEEIAIACNKNT------GISLA 287 (337)
Q Consensus 262 -~~~~~~~~~-L~~~gI~v~~~~------girig 287 (337)
.+..++.+. +++.||.+.+.. .|||+
T Consensus 337 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis 370 (393)
T PRK05764 337 ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS 370 (393)
T ss_pred cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE
Confidence 123565555 466899987632 46765
No 165
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=98.62 E-value=6.9e-07 Score=88.02 Aligned_cols=155 Identities=14% Similarity=0.100 Sum_probs=105.6
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| ++++++.|.+. .+.+.||+.|+..++.+++++
T Consensus 51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~ 121 (388)
T PRK08861 51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQ 121 (388)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEE
Confidence 456677888 58899999764 566777789988888888654
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|+.- | +.|++|
T Consensus 122 ~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l 201 (388)
T PRK08861 122 FVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYI 201 (388)
T ss_pred EECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceec
Confidence 001 27888876 433 358999999999999999999999999988654 1 233333
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||++++ ++.+++... . ...|....|.-+. ..+.-+ ....-++++..+||..+++.|++.
T Consensus 202 ~G~~d~~gG~i~~~~~~~~~~~~~~-~-~~~G~~~~p~~a~--l~~rgl--~Tl~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 202 NGHSDVIGGVLITKTKEHAEELAWW-G-NCIGATGTPFDSY--MTLRGI--RTLGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred cCCCcceeEEEEecHHHHHHHHHHH-H-hccCCCCChHHHH--HHHhcC--CCHHHHHHHHHHHHHHHHHHHHhC
Confidence 2576654 355555422 1 1223333333333 223333 346788999999999999999984
No 166
>PRK08114 cystathionine beta-lyase; Provisional
Probab=98.61 E-value=5e-07 Score=89.15 Aligned_cols=192 Identities=11% Similarity=0.048 Sum_probs=125.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| ++++++-|.++ ++.|.||+.|+.+++.+++++
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~ 130 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTT 130 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEE
Confidence 667778898 57889999886 788999999988888898765
Q ss_pred ----------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcC--CeEEEeccccccccc-----e----eeeecc
Q psy10669 120 ----------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETD--SIMFADMSHISGLIA-----G----VKGVTK 173 (337)
Q Consensus 120 ----------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~g--a~l~vD~AH~~Gli~-----g----~~~T~~ 173 (337)
+.+ ++|+|++...++ ....|+++|.++|+++| ++++||.+|.+|++- | +.+.+|
T Consensus 131 ~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tK 210 (395)
T PRK08114 131 WFDPLIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTK 210 (395)
T ss_pred EECCCCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcc
Confidence 101 268998874333 37799999999999984 999999999999875 2 233333
Q ss_pred --------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CE
Q psy10669 174 --------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YH 242 (337)
Q Consensus 174 --------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~ 242 (337)
-+|.+.. ++.+.+.... ...|+...|--+.+. +.-+ ....-++++..+||..+++.|++.. ++
T Consensus 211 yl~Ghsdv~~G~v~~~~~~~~~l~~~~--~~~G~~~~p~~a~l~--~rgl--~TL~lR~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 211 YLVGHSDAMIGTAVANARCWEQLRENS--YLMGQMVDADTAYMT--SRGL--RTLGVRLRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred cccCCCcceeEEEEcCHHHHHHHHHHH--HhccCCCCHHHHHHH--HcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 2465543 3444444321 123454445555443 1222 2456789999999999999999842 22
Q ss_pred -EecCCCC---------------CeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 243 -VVTGGTD---------------VHLILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 243 -v~~~~t~---------------~h~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
|..++-. .-++.+.++. +.+...+.+.++...+.
T Consensus 285 ~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~~~f~~~l~l~ 334 (395)
T PRK08114 285 RVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK-KLTDEQLANYLDNFSLF 334 (395)
T ss_pred EEECCCCCCCccHHHHHhhCCCCceEEEEEecC-cccHHHHHHHHHhCCcc
Confidence 3333222 2356666642 11245566777765543
No 167
>PRK07050 cystathionine beta-lyase; Provisional
Probab=98.61 E-value=4.5e-07 Score=89.53 Aligned_cols=155 Identities=13% Similarity=0.027 Sum_probs=102.5
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+....++| +++++++|.++ .+.+.||+.|+..++.+++++
T Consensus 63 ~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~ 133 (394)
T PRK07050 63 ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVR 133 (394)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEE
Confidence 666677888 57889999875 567788899999989998765
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~-- 173 (337)
+.+ ++|+|++. +++ .....|+++|.++|+++|+++++|++|..|+.- | +.+.+|
T Consensus 134 ~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~ 213 (394)
T PRK07050 134 FYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQ 213 (394)
T ss_pred EECCCCHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCcee
Confidence 001 26888875 333 247778899999999999999999999988753 2 122222
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||.+++ ++.+++..... . .|....+. .+. .++..+ +....+.++..+|++.+++.|.+.
T Consensus 214 ~g~~~~~gG~v~~~~~~~~~~~~~~~~-~-~G~~~~~~-~a~-l~lr~l--~tl~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 214 SGGSDVLMGATITADAELHAKLKLARM-R-LGIGVSAD-DCS-LVLRGL--PSLQVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred cCCCCeeEEEEEECCHHHHHHHHHHHH-h-cCCCCCHH-HHH-HHHcCC--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 1555543 46665553311 1 12222222 221 222223 346678999999999999999984
No 168
>PRK08912 hypothetical protein; Provisional
Probab=98.61 E-value=1.4e-05 Score=78.15 Aligned_cols=154 Identities=16% Similarity=0.149 Sum_probs=90.4
Q ss_pred ccEEEEc-Ccc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC-
Q psy10669 124 FDFLSSG-TTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG- 175 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G- 175 (337)
+|+|++. +.+ .+...+. ++|.++|+++|+++++|+++.-.... .+.+|. | .|
T Consensus 160 ~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK08912 160 TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW 239 (387)
T ss_pred ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc
Confidence 5666665 322 2456664 45667889999999999998432111 122332 2 23
Q ss_pred --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
|+++. ++.+.+.....+...+.+ ++..+++..++... ....++.++++.++.+++.+.|.+.|+++.. ...+.
T Consensus 240 RiG~~~~~~~~~~~l~~~~~~~~~~~~-~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~ 316 (387)
T PRK08912 240 KVGFVCAAPPLLRVLAKAHQFLTFTTP-PNLQAAVAYGLGKP-DDYFEGMRADLARSRDRLAAGLRRIGFPVLP-SQGTY 316 (387)
T ss_pred eeEEEecCHHHHHHHHHHHhhccccCC-hHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCcce
Confidence 66655 455555433222222222 22333344444321 1233567788889999999999999988764 23456
Q ss_pred EEEEEecCC--CcchHHHHHHH-hhcCceecc
Q psy10669 252 LILIDLRKN--KLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 252 ~v~V~~~~~--~~~~~~~~~~L-~~~gI~v~~ 280 (337)
.+++++... ..+..++.+.| ++.||.+.+
T Consensus 317 ~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~p 348 (387)
T PRK08912 317 FLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIP 348 (387)
T ss_pred EEEecccccCCCCCHHHHHHHHHhcCCEEEec
Confidence 777888652 23555666665 678998876
No 169
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=98.61 E-value=2.1e-05 Score=76.13 Aligned_cols=227 Identities=15% Similarity=0.104 Sum_probs=138.9
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS- 106 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt- 106 (337)
..-|.|-..||- .+|.+++++...+......+|+.. | ..++ ++.+++++|.+.. .+|.+++|+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~---~~~l----r~~ia~~~~~~~~---~~I~~t~G~~ 91 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP----R---AAAL----KAALRAAMGVPAG---ADVLLGNGSD 91 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC----C---HHHH----HHHHHHHhCcCCC---CcEEEcCCHH
Confidence 456777677774 489999999865432111122211 1 1233 4677889987642 268889996
Q ss_pred hhHHHHHHhhCCc------------------------------------------c-c--ccccEEEEcCccc--ccccC
Q psy10669 107 PANFAVCEKALPT------------------------------------------N-N--ARFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 107 ~AN~~v~~aLl~~------------------------------------------~-~--a~pklII~~~S~~--~~~~d 139 (337)
++...++.+++++ + . .++|+|++..-.+ +...+
T Consensus 92 ~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 92 ELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 4656666677553 0 0 1368887763344 58889
Q ss_pred hHHHHHHhhhcCCeEEEeccccc--c--ccc--------eeeeec-c------CCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHIS--G--LIA--------GVKGVT-K------TGEKILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~--G--li~--------g~~~T~-~------~Gg~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
.+++.+|++..+.++++|+++.. + ... .+..+. | +-|+++. ++.+.+.....+. +.
T Consensus 172 ~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~~~i~~~~~~~~~~---~~ 248 (356)
T PRK04870 172 DADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSKLGLAGLRLGYLAGHPAWIAELDKVRPPY---NV 248 (356)
T ss_pred HHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchhhhhHHHhhhhhhCCHHHHHHHHHccCCC---cC
Confidence 99999998877899999999742 1 111 112222 2 1255554 4666666543332 23
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
+....++...++.+. ..+++.++++.++.+++.+.|.+. |+.+.. .....+++.+. +..++.+.|.+.||.
T Consensus 249 ~~~~q~~a~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~l~~~gI~ 320 (356)
T PRK04870 249 NVLTQATALFALEHV--DVLDAQAAQLRAERTRLAAALAALPGVTVFP--SAANFILVRVP----DAAAVFDGLKTRGVL 320 (356)
T ss_pred CHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeEEEEECC----CHHHHHHHHHHCCEE
Confidence 333333333333321 235677888889999999999885 887654 34446677664 456788889999999
Q ss_pred eccC
Q psy10669 278 CNKN 281 (337)
Q Consensus 278 v~~~ 281 (337)
+.+.
T Consensus 321 v~~~ 324 (356)
T PRK04870 321 VKNL 324 (356)
T ss_pred EEEC
Confidence 9753
No 170
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=98.61 E-value=3.7e-06 Score=84.02 Aligned_cols=189 Identities=14% Similarity=0.102 Sum_probs=113.9
Q ss_pred HHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhC-Cc----------------------------------c----
Q psy10669 81 AQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKAL-PT----------------------------------N---- 120 (337)
Q Consensus 81 ~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl-~~----------------------------------~---- 120 (337)
.++.+++++|++. .++.+++| +.+..+++.++. .+ .
T Consensus 117 ~~~~la~l~g~~~----~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~ 192 (447)
T PRK00451 117 YQTMICELTGMDV----ANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVT 192 (447)
T ss_pred HHHHHHHHhCCCc----ceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCC
Confidence 3457899999987 36777777 555666666763 22 0
Q ss_pred ----cc-----cccEEEEc-CcccccccChHHHHHHhhhcCCeEEE--eccccccccc--------eeeee---------
Q psy10669 121 ----NA-----RFDFLSSG-TTCYSRCLDYARFRQICDETDSIMFA--DMSHISGLIA--------GVKGV--------- 171 (337)
Q Consensus 121 ----~a-----~pklII~~-~S~~~~~~d~~~l~eia~~~ga~l~v--D~AH~~Gli~--------g~~~T--------- 171 (337)
+. ++++|++. ++..+...|+++|.++|+++|++++| |. +..|++. .++++
T Consensus 193 d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~-~~~g~~~~~~~~~~D~~~~s~~k~~~~~~ 271 (447)
T PRK00451 193 DLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDP-VSLGLLKPPGEYGADIVVGEGQPLGIPLS 271 (447)
T ss_pred CHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcCh-HHhccCCCcccCCCCEEEECCCcCCCCCC
Confidence 11 15666665 44457888999999999999999998 53 3556552 12222
Q ss_pred --ccCCchhhh--hHHHHHhhc-----------------------cCCCCCCCCcHH---HHH--HHHHHHHHHhchhhH
Q psy10669 172 --TKTGEKILY--DYEEKINNA-----------------------VFPSLQGGPHNH---AIG--AIATAMLQAQSDEFK 219 (337)
Q Consensus 172 --~~~Gg~i~~--~l~~~i~~~-----------------------~~p~~~g~~~~~---~ia--ala~a~~e~~~~~~~ 219 (337)
++..|++.. ++.+.+.+. ......++.+.. .+. +.+.++..+.+..++
T Consensus 272 ~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~ 351 (447)
T PRK00451 272 FGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLR 351 (447)
T ss_pred CCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHH
Confidence 233466644 444432100 000112222221 122 222234444445568
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 220 SYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 220 ~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
+.+++..+++++|.++|.+. |+++.. +..-+.+.++++ .+..++.+.|.+.||.+
T Consensus 352 ~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~v~~~---~~~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 352 ELAEQNHQKAHYLAERLAEIGGVELFD-GPFFNEFVVRLP---KPAEEVNEALLEKGILG 407 (447)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEEecC-CCeEEEEEEecC---CCHHHHHHHHHhcCCCC
Confidence 88999999999999999986 688763 222233445553 25678888888888764
No 171
>PRK05957 aspartate aminotransferase; Provisional
Probab=98.61 E-value=2.4e-05 Score=76.82 Aligned_cols=254 Identities=13% Similarity=0.058 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHhhcccceeeeccCC-C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-
Q psy10669 16 PELYSLIKKEKHRQINGIELIASEN-F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD- 92 (337)
Q Consensus 16 ~~~~~~~~~e~~rq~~~i~l~asen-~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~- 92 (337)
+.++.++.+-..+-...+.|-..++ + .++.+.+|+...+.+. ....|....-..++-...++.+++++|.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~------~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~ 86 (389)
T PRK05957 13 SPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANP------ENHKYQAVQGIPPLLEAITQKLQQDNGIEL 86 (389)
T ss_pred CcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4444443333333234576666554 3 5888888887654321 11112222222233333445777888864
Q ss_pred -CCCCcceeecCCCc-hhHHHHHHhhCCc-----------------------------------------cc---ccccE
Q psy10669 93 -PEQWGCNVQPYSGS-PANFAVCEKALPT-----------------------------------------NN---ARFDF 126 (337)
Q Consensus 93 -~~~~~~~v~~~Sgt-~AN~~v~~aLl~~-----------------------------------------~~---a~pkl 126 (337)
++ .++.+++|+ ++...++.+++++ +. .++|+
T Consensus 87 ~~~---~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~kl 163 (389)
T PRK05957 87 NNE---QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRA 163 (389)
T ss_pred CCC---CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceE
Confidence 12 258888885 6776667777643 10 12688
Q ss_pred EEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccc----c--ccc-----------eeeeec-c----CC---c
Q psy10669 127 LSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHIS----G--LIA-----------GVKGVT-K----TG---E 176 (337)
Q Consensus 127 II~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G--li~-----------g~~~T~-~----~G---g 176 (337)
|++..-.+ +...| +++|.++|+++|+++++|+++.- + ... .++.|. | .| |
T Consensus 164 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 243 (389)
T PRK05957 164 IVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIG 243 (389)
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeE
Confidence 87763333 46666 67778889999999999999641 1 111 112222 2 13 5
Q ss_pred hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EEecCCCCCeE
Q psy10669 177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HVVTGGTDVHL 252 (337)
Q Consensus 177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v~~~~t~~h~ 252 (337)
+++. ++.+.+.....+...+.+. +...++..++.+- ...+++.++++.++.+.+.+.|.+. |+ .+.. ...+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~gg~~ 320 (389)
T PRK05957 244 YMVIPIHLLEAIKKIQDTILICPPV-VSQYAALGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP-ANGAFY 320 (389)
T ss_pred EEecCHHHHHHHHHHHhhcccCCCc-HHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC-CCeeEE
Confidence 5544 5666665443322222232 2333323333221 1123566777888888888988874 43 3332 112345
Q ss_pred EEEEecCCCcchHHHHHHHh-hcCceeccCc
Q psy10669 253 ILIDLRKNKLTGSKVELVLE-EIAIACNKNT 282 (337)
Q Consensus 253 v~V~~~~~~~~~~~~~~~L~-~~gI~v~~~~ 282 (337)
+++.+.. +++..++.+.|. +.||.+.+-.
T Consensus 321 ~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~ 350 (389)
T PRK05957 321 CFLKVNT-DLNDFELVKQLIREYRVAVIPGT 350 (389)
T ss_pred EEEeCCC-CCChHHHHHHHHHHCCEEEccch
Confidence 6677643 557777777774 6899998743
No 172
>KOG1368|consensus
Probab=98.61 E-value=1.1e-06 Score=81.84 Aligned_cols=214 Identities=18% Similarity=0.211 Sum_probs=145.9
Q ss_pred CCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------
Q psy10669 61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------- 119 (337)
Q Consensus 61 g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------- 119 (337)
..-|.--|+--....+|| ++.+++||.|. .+..+|||..|+..+..=|..
T Consensus 45 A~vgDdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~ 115 (384)
T KOG1368|consen 45 ASVGDDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGI 115 (384)
T ss_pred cccCcccccCCccHHHHH----HHHHHHhCccc-----eeeecccccccHHHHHHHhcCCCceEEeccchheeehhccCh
Confidence 344556666666778999 47799999995 788899999998888876542
Q ss_pred ------------------------ccc----c-------ccEEEEcCcc--cc-cccChHH---HHHHhhhcCCeEEEec
Q psy10669 120 ------------------------NNA----R-------FDFLSSGTTC--YS-RCLDYAR---FRQICDETDSIMFADM 158 (337)
Q Consensus 120 ------------------------~~a----~-------pklII~~~S~--~~-~~~d~~~---l~eia~~~ga~l~vD~ 158 (337)
+.+ + ++||.+.-+- .+ ...|++. ++++|+++|..|..|.
T Consensus 116 s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DG 195 (384)
T KOG1368|consen 116 SQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDG 195 (384)
T ss_pred hhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecch
Confidence 111 1 4888886333 34 7788875 5578999999999998
Q ss_pred ccccccc-c-e--------------eeee-c---cCCchhhh--hHHH---HHhhccCCCC-CCCCcHHHHHHHHHHHHH
Q psy10669 159 SHISGLI-A-G--------------VKGV-T---KTGEKILY--DYEE---KINNAVFPSL-QGGPHNHAIGAIATAMLQ 212 (337)
Q Consensus 159 AH~~Gli-~-g--------------~~~T-~---~~Gg~i~~--~l~~---~i~~~~~p~~-~g~~~~~~iaala~a~~e 212 (337)
|-..--- + | +|.. + |.|.+|++ ++.+ ..+++.=.|+ |++ . ++++.+.
T Consensus 196 ARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~kA~~~RKalGGGmRQsG----v---LaaaaLv 268 (384)
T KOG1368|consen 196 ARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDKARHFRKALGGGMRQSG----V---LAAAALV 268 (384)
T ss_pred hhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHHHHHHHHHhcCchhHHH----H---HHHHHHH
Confidence 8754211 1 1 1111 1 56777776 5544 4556643333 322 2 2222233
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 213 AQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 213 ~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
.++..++ ..++..+.|+.|++++...+ |++--.-.++.++.+.+...+++..++.+.|+++||.+-... -+||...
T Consensus 269 al~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh 347 (384)
T KOG1368|consen 269 ALDENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLH 347 (384)
T ss_pred HhhcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEE
Confidence 3333444 67788899999999999876 777654478889988888888999999999999999876422 4677665
Q ss_pred hH
Q psy10669 290 IQ 291 (337)
Q Consensus 290 ~~ 291 (337)
.+
T Consensus 348 ~Q 349 (384)
T KOG1368|consen 348 HQ 349 (384)
T ss_pred Ee
Confidence 44
No 173
>PRK07777 aminotransferase; Validated
Probab=98.60 E-value=1.9e-05 Score=77.32 Aligned_cols=238 Identities=15% Similarity=0.090 Sum_probs=129.3
Q ss_pred cceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC-CCcceeecCCC-c
Q psy10669 31 NGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPYSG-S 106 (337)
Q Consensus 31 ~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~Sg-t 106 (337)
..++|-...- -.++.+.+++...+.... ..|....-..++.+...+.+.+.+|.+.. ++ +|.+++| +
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~--~i~~t~G~~ 95 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-------NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDT--EVLVTVGAT 95 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cEEEeCCcH
Confidence 4566553221 126667776655433211 12322222334443333455566776531 11 4677777 6
Q ss_pred hhHHHHHHhhCCc--------------------------------c-----c-------c---cccEEEEcCccc--ccc
Q psy10669 107 PANFAVCEKALPT--------------------------------N-----N-------A---RFDFLSSGTTCY--SRC 137 (337)
Q Consensus 107 ~AN~~v~~aLl~~--------------------------------~-----~-------a---~pklII~~~S~~--~~~ 137 (337)
+|+..++.+++++ . . + ++++|++..-.+ +..
T Consensus 96 ~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~ 175 (387)
T PRK07777 96 EAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTV 175 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCcc
Confidence 7888777888653 0 0 0 257777752222 344
Q ss_pred cC---hHHHHHHhhhcCCeEEEecccccccc------c-----------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHISGLI------A-----------GVKGVT-K----TG---EKILY--DYEEKIN 187 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli------~-----------g~~~T~-~----~G---g~i~~--~l~~~i~ 187 (337)
.+ +++|.++|+++|+++++|+++.--.. . .+..|. | .| |+++. ++.+.+.
T Consensus 176 ~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~ 255 (387)
T PRK07777 176 LTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVR 255 (387)
T ss_pred CCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHH
Confidence 43 66677899999999999999753111 0 112232 2 13 55554 4555554
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCC-cchHH
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNK-LTGSK 266 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~-~~~~~ 266 (337)
....-... +++.+...+++.++..- +...++.++++.++.+++.+.|.+.|+++... ..+..+++.+...+ .++.+
T Consensus 256 ~~~~~~~~-~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 332 (387)
T PRK07777 256 AAKQYLTY-VGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDS-AGTYFLCADPRPLGYDDGTE 332 (387)
T ss_pred HHHhhccc-CCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCC-CcceEEEecccccCCCCHHH
Confidence 32210111 11222233333333321 22335667888999999999999998887642 23566666765322 25677
Q ss_pred HHHHH-hhcCceecc
Q psy10669 267 VELVL-EEIAIACNK 280 (337)
Q Consensus 267 ~~~~L-~~~gI~v~~ 280 (337)
+.+.| +++||.+.+
T Consensus 333 ~~~~l~~~~gv~v~p 347 (387)
T PRK07777 333 FCRALPERVGVAAIP 347 (387)
T ss_pred HHHHHHHhCCEEEeC
Confidence 77777 468999865
No 174
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.59 E-value=7.6e-07 Score=87.60 Aligned_cols=187 Identities=13% Similarity=0.107 Sum_probs=121.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+..++++| ++++++.|.++ .+.+.||+.|...++.+++++
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~ 132 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVD 132 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEE
Confidence 778889999 47899999986 699999999988888888764
Q ss_pred ----------ccc--cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeecc---
Q psy10669 120 ----------NNA--RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTK--- 173 (337)
Q Consensus 120 ----------~~a--~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~--- 173 (337)
++. ++|+|++..... ....|+++|.++|+++| ++||.+|.+++.. .+.|++|
T Consensus 133 fvd~~~~~~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~ 210 (384)
T PRK06434 133 YIDTDRLNSLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYIS 210 (384)
T ss_pred EECCCChhheeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccC
Confidence 101 257888863332 47899999999999998 6789999888764 1234332
Q ss_pred --C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EE
Q psy10669 174 --T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HV 243 (337)
Q Consensus 174 --~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v 243 (337)
. ||.|++ ++.+++..... .+|....+.-|++. +..+ .....+.++-.+|++.+++.|.+. .+ +|
T Consensus 211 G~~d~~gG~vv~~~~~~~~~~~~~~~--~~G~~~~~~~A~l~--~~gL--~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V 284 (384)
T PRK06434 211 GHSDVVMGVAGTNNKSIFNNLVERRK--TLGSNPDPIQAYLA--LRGL--KTLGLRMEKHNKNGMELARFLRDSKKISNV 284 (384)
T ss_pred CCCCceEEEEecCcHHHHHHHHHHHH--hcCCCCCHHHHHHH--HhCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 1 677765 35554442211 12333334444432 3343 356788999999999999999984 23 23
Q ss_pred ecCC---------CCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 244 VTGG---------TDVHLILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 244 ~~~~---------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
..++ .-.-++.+.+. + ...+.+.++...+.
T Consensus 285 ~yPgl~~~~~~~~g~g~~~sf~l~--~--~~~~~~f~~~l~l~ 323 (384)
T PRK06434 285 YYPDTEIGKKVLRGFGGMLSFELR--S--MEDVHKFIRNLEIP 323 (384)
T ss_pred ECCChHHHHHhcCCCCceEEEEEC--C--HHHHHHHHHhCCcc
Confidence 3221 12446666664 2 34455666655443
No 175
>PLN00175 aminotransferase family protein; Provisional
Probab=98.59 E-value=2.2e-05 Score=77.92 Aligned_cols=239 Identities=15% Similarity=0.101 Sum_probs=134.6
Q ss_pred cceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 31 NGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 31 ~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
..|+|-..+- -.++.+++++...+... .. .|....-..++.....+.+.+.+|.+-. .-.+|..++| ++
T Consensus 55 ~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~------~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-~~~~I~vt~G~~~ 126 (413)
T PLN00175 55 GAINLGQGFPNFDGPDFVKEAAIQAIRDG-KN------QYARGFGVPELNSAIAERFKKDTGLVVD-PEKEVTVTSGCTE 126 (413)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhcC-CC------CcCCCCCCHHHHHHHHHHHHHHhCCCCC-CCCCEEEeCCHHH
Confidence 4565543332 23788888887654421 01 1221221233433223344555564311 0014778888 57
Q ss_pred hHHHHHHhhCCc----------------------------------------ccc-----cccEEEEcCccc--ccccC-
Q psy10669 108 ANFAVCEKALPT----------------------------------------NNA-----RFDFLSSGTTCY--SRCLD- 139 (337)
Q Consensus 108 AN~~v~~aLl~~----------------------------------------~~a-----~pklII~~~S~~--~~~~d- 139 (337)
|+..++.+++++ ++. ++|+|++..-++ +...+
T Consensus 127 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~ 206 (413)
T PLN00175 127 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTR 206 (413)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCH
Confidence 887778888754 010 268787753333 35554
Q ss_pred --hHHHHHHhhhcCCeEEEeccccccccc----------e------eeeec-c----CC---chhhh--hHHHHHhhccC
Q psy10669 140 --YARFRQICDETDSIMFADMSHISGLIA----------G------VKGVT-K----TG---EKILY--DYEEKINNAVF 191 (337)
Q Consensus 140 --~~~l~eia~~~ga~l~vD~AH~~Gli~----------g------~~~T~-~----~G---g~i~~--~l~~~i~~~~~ 191 (337)
+++|.++|+++|+++++|+++.-.... + +.++. | .| |++++ ++.+.+.....
T Consensus 207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~ 286 (413)
T PLN00175 207 EELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS 286 (413)
T ss_pred HHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHh
Confidence 445667889999999999998543321 1 12222 2 13 77665 46555543321
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCc-chHHHHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKL-TGSKVELV 270 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~-~~~~~~~~ 270 (337)
.+..+++.+...+++.++..- +...++.+++..++.+.+.+.|.+.|+.+.. ...++.+++++...+. +..++...
T Consensus 287 -~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-p~g~~f~~~~~~~~~~~~~~~~~~~ 363 (413)
T PLN00175 287 -FLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGFKVYP-SSGTYFVMVDHTPFGFENDIAFCEY 363 (413)
T ss_pred -hccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecC-CCeeEEEEEeccccCCCCHHHHHHH
Confidence 111233344444444544321 2234677888999999999999999988764 2346678888754343 35556555
Q ss_pred H-hhcCceecc
Q psy10669 271 L-EEIAIACNK 280 (337)
Q Consensus 271 L-~~~gI~v~~ 280 (337)
| ++.||.+.+
T Consensus 364 ll~~~gV~v~p 374 (413)
T PLN00175 364 LIEEVGVAAIP 374 (413)
T ss_pred HHHhCCEEEeC
Confidence 5 578999876
No 176
>PRK07582 cystathionine gamma-lyase; Validated
Probab=98.59 E-value=3e-06 Score=82.81 Aligned_cols=190 Identities=15% Similarity=0.036 Sum_probs=116.0
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++....++| +++++++ .+. ++.+.||+.|+..++.+++++
T Consensus 49 ~~p~~~~Le----~~lA~l~-~~~-----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~ 118 (366)
T PRK07582 49 SNPTWRALE----AALGELE-GAE-----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVR 118 (366)
T ss_pred CCccHHHHH----HHHHHHc-CCC-----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEE
Confidence 445567787 4677888 333 688999999988888888764
Q ss_pred -----c---c--ccccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccc--cc------eeeee-cc-----
Q psy10669 120 -----N---N--ARFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGL--IA------GVKGV-TK----- 173 (337)
Q Consensus 120 -----~---~--a~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~------g~~~T-~~----- 173 (337)
. . .++++|++...+++ ...|+++|.++|+++|++++||++|..++ .. .++++ +|
T Consensus 119 ~v~~~~~~~~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~ 198 (366)
T PRK07582 119 EAPTAGMAEAALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGH 198 (366)
T ss_pred EECCCChHHHhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCC
Confidence 0 0 12577776533333 46799999999999999999999986432 22 12232 22
Q ss_pred C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-Eec
Q psy10669 174 T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVT 245 (337)
Q Consensus 174 ~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~ 245 (337)
. +|+++. ++.+++... .....+++. +.-+.++. ..+ .....+.++..+|++.+++.|.+. .+. |..
T Consensus 199 ~g~~~G~v~~~~~~l~~~l~~~-~~~~g~~~~-~~~a~l~~--r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~y 272 (366)
T PRK07582 199 SDLLLGYVAGRDPELMAAVERW-RLLAGAIPG-PFEAWLAH--RSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRY 272 (366)
T ss_pred CCeeEEEEEcCcHHHHHHHHHH-HHHhCCCCC-HHHHHHHH--hcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence 1 366654 355555432 111122222 22233222 222 235677789999999999999983 443 332
Q ss_pred CCCC---------------CeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 246 GGTD---------------VHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 246 ~~t~---------------~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
.+-. .-++.+.++ +...+.+.|+..++...
T Consensus 273 p~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~~~~~l~~~~~ 317 (366)
T PRK07582 273 PGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAERFVAASRLVVA 317 (366)
T ss_pred CCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHHHHHhCCccee
Confidence 2222 224555553 35677888888777665
No 177
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.58 E-value=8.8e-07 Score=88.53 Aligned_cols=88 Identities=16% Similarity=0.123 Sum_probs=69.5
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++..++++| +++++++|.++ .+.+.||+.|+..++.+++++
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~ 132 (433)
T PRK08134 62 SNPTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETT 132 (433)
T ss_pred cChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEE
Confidence 556678888 58899999986 588999999987778888654
Q ss_pred ----------ccc---cccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 120 ----------NNA---RFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 120 ----------~~a---~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+.+ ++|+|++..-.++ ...|+++|.++|+++|++++||.+|.+|++.
T Consensus 133 ~vd~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~ 194 (433)
T PRK08134 133 FVKPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL 194 (433)
T ss_pred EECCCCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 101 2688888643333 6799999999999999999999999988765
No 178
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.58 E-value=1.9e-05 Score=76.57 Aligned_cols=150 Identities=11% Similarity=0.037 Sum_probs=88.6
Q ss_pred ccEEEEc-Ccc-cccccChHH---HHHHhhhcCCeEEEeccccc--------cccc-----------eeeeec-c-----
Q psy10669 124 FDFLSSG-TTC-YSRCLDYAR---FRQICDETDSIMFADMSHIS--------GLIA-----------GVKGVT-K----- 173 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~--------Gli~-----------g~~~T~-~----- 173 (337)
+++|++. +++ .+...|.++ |.++|+++|+++++|+++.. +.+. .++.+. |
T Consensus 143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~ 222 (357)
T TIGR03539 143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA 222 (357)
T ss_pred ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence 6777765 333 246666554 66778999999999999841 1110 111222 1
Q ss_pred --CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCC
Q psy10669 174 --TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTD 249 (337)
Q Consensus 174 --~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~ 249 (337)
++|++++ ++.+.+......... +++.+...++..++.. ....+..+++..++.+.+.+.|.+.|+++... ..
T Consensus 223 G~R~G~~i~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p-~~ 298 (357)
T TIGR03539 223 GYRAGFVAGDPALVAELLTVRKHAGL-MVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS-EA 298 (357)
T ss_pred ceeEEEEecCHHHHHHHHHHHhhccc-CCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC-Cc
Confidence 3466665 565555433222222 3344444444444422 12334556777788888999999989876542 23
Q ss_pred CeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 250 VHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
+..+++.+.. +..++.+.|.+.||.+.+
T Consensus 299 ~~~~~~~~~~---~~~~~~~~l~~~gV~v~p 326 (357)
T TIGR03539 299 GLYLWATRGE---DAWDTVDRLAELGILVAP 326 (357)
T ss_pred cEEEEEECCC---CHHHHHHHHHhCCEEECC
Confidence 4455565532 456777888889999876
No 179
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=98.57 E-value=4.4e-05 Score=74.59 Aligned_cols=154 Identities=12% Similarity=0.067 Sum_probs=92.2
Q ss_pred ccEEEEcCccc--ccccChH---HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC-
Q psy10669 124 FDFLSSGTTCY--SRCLDYA---RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG- 175 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G- 175 (337)
+|+|++..-.+ +...|.+ +|.++|+++|+++++|+++.-.... .+..|. | .|
T Consensus 167 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 246 (385)
T PRK09276 167 AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW 246 (385)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcch
Confidence 67777762234 4677764 4556778999999999998632211 012222 2 23
Q ss_pred --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
|++++ ++.+.+..... ....+.+.+...+...++... ....++.++++.++.+++.+.|.+.|+++... ..+.
T Consensus 247 RiG~~i~~~~l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~ 323 (385)
T PRK09276 247 RIGFAVGNADLIAGLGKVKS-NVDSGVFQAIQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP-KATF 323 (385)
T ss_pred hheeeeCCHHHHHHHHHHHh-hccCCCCHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Ccce
Confidence 66665 46565554321 222233344444444444321 22335667788888999999999999877642 3355
Q ss_pred EEEEEecCCCcchHHHHHHH-hhcCceeccC
Q psy10669 252 LILIDLRKNKLTGSKVELVL-EEIAIACNKN 281 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~ 281 (337)
.+++.+.. +++..++.+.| ++.||.+.+-
T Consensus 324 ~~~v~~~~-~~~~~~l~~~ll~~~gi~v~~g 353 (385)
T PRK09276 324 YVWAPVPK-GYTSAEFATLLLDKAGVVVTPG 353 (385)
T ss_pred EEEEECCC-CCCHHHHHHHHHHhCCEEECCc
Confidence 57787754 34667766665 5689998873
No 180
>PRK07683 aminotransferase A; Validated
Probab=98.57 E-value=2.1e-05 Score=77.18 Aligned_cols=238 Identities=15% Similarity=0.084 Sum_probs=127.9
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg 105 (337)
.+.+.|-.++.. .++.+.+++...+.+.+ .+| .-..-..+++....+.+.+-+|. ++ ++ +|.+++|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~--~I~~t~G 97 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSY------THNAGLLELRKAACNFVKDKYDLHYSP-ES--EIIVTIG 97 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHHHHHHHHHhCCCCCC-CC--cEEEeCC
Confidence 344665555432 36788888877654321 122 11112234442222233222343 22 11 5777777
Q ss_pred -chhHHHHHHhhCCc----------------------------------------cc-----ccccEEEEcCccc--ccc
Q psy10669 106 -SPANFAVCEKALPT----------------------------------------NN-----ARFDFLSSGTTCY--SRC 137 (337)
Q Consensus 106 -t~AN~~v~~aLl~~----------------------------------------~~-----a~pklII~~~S~~--~~~ 137 (337)
++|+..++.+++++ .+ .++++|++..-++ +..
T Consensus 98 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~ 177 (387)
T PRK07683 98 ASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVT 177 (387)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcC
Confidence 68887777887643 00 0257776652233 344
Q ss_pred cC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHhh
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKINN 188 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~ 188 (337)
.+ +++|.++|+++|+++++|+++.-.... .+++|. | .| |+++. ++.+.+..
T Consensus 178 ~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~ 257 (387)
T PRK07683 178 LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILK 257 (387)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHH
Confidence 44 566778889999999999998743222 112222 1 13 66665 45555543
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669 189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~ 268 (337)
.. +....+++.....++...+.+- ....+..++++.++.+++.+.|.+.|+.+..+ ..+..+++.+...+.+..+..
T Consensus 258 ~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 334 (387)
T PRK07683 258 VH-QYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP-TGAFYLFPSIGHFTMSSFDFA 334 (387)
T ss_pred HH-HhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CeeEEEEEecccCCCCHHHHH
Confidence 21 2222222223333332333221 12234567778889999999999888876542 234456666654344555554
Q ss_pred -HHHhhcCceecc
Q psy10669 269 -LVLEEIAIACNK 280 (337)
Q Consensus 269 -~~L~~~gI~v~~ 280 (337)
..|+++||.+.+
T Consensus 335 ~~ll~~~gI~v~p 347 (387)
T PRK07683 335 LDLVEEAGLAVVP 347 (387)
T ss_pred HHHHHhCCEEEcC
Confidence 456788999876
No 181
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.57 E-value=5.6e-06 Score=82.62 Aligned_cols=158 Identities=11% Similarity=0.045 Sum_probs=87.8
Q ss_pred EEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c--CCc-----h
Q psy10669 126 FLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K--TGE-----K 177 (337)
Q Consensus 126 lII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~--~Gg-----~ 177 (337)
.||+. ..+++. .+ +++++++|++||++||+|+.|+ |+-- | + ..|. | .|| +
T Consensus 210 avi~E-pi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi~t~sK~lg~G~pigav 287 (433)
T PRK08117 210 AVIIE-PVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDIMTIAKGIASGLPLSAV 287 (433)
T ss_pred EEEEC-CeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCEeehhhhccCCCcceeE
Confidence 45554 466554 34 5678899999999999999998 6411 1 1 1121 2 123 2
Q ss_pred hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCeEE
Q psy10669 178 ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVHLI 253 (337)
Q Consensus 178 i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h~v 253 (337)
+.. ++.+.+......+++ +.++...++...++..+.+ ....+++.++.++|++.|.+.. +.+... ..-.-++
T Consensus 288 ~~~~~i~~~~~~~~~~~T~-~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~ 363 (433)
T PRK08117 288 VASKELMEQWPLGSHGTTF-GGNPVACAAALATLEVIKE---EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMI 363 (433)
T ss_pred EEcHHHHhhccCCCCCCCC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEE
Confidence 222 455544433333333 3467777777777766633 2567888888999998887742 322210 0111123
Q ss_pred EEEecCC-----CcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669 254 LIDLRKN-----KLTGSKVELVLEEIAIACNKN----TGISLAAE 289 (337)
Q Consensus 254 ~V~~~~~-----~~~~~~~~~~L~~~gI~v~~~----~girig~~ 289 (337)
.|.+... ......+.+.|.+.||.+... ..+||..+
T Consensus 364 gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~ 408 (433)
T PRK08117 364 GIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPP 408 (433)
T ss_pred EEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCC
Confidence 3444321 112345566677789987542 15666543
No 182
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=98.56 E-value=1.5e-06 Score=86.03 Aligned_cols=188 Identities=12% Similarity=0.058 Sum_probs=115.3
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------- 119 (337)
...+++| +++++++|.++ ++.+.||+.|...++.+++++
T Consensus 60 p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v 130 (405)
T PRK08776 60 PTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA 130 (405)
T ss_pred hHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE
Confidence 4446677 57889999875 688999998887778888654
Q ss_pred ------cc--c---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc----
Q psy10669 120 ------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK---- 173 (337)
Q Consensus 120 ------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~---- 173 (337)
++ + ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|..- | +.|.+|
T Consensus 131 ~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g 210 (405)
T PRK08776 131 DLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYING 210 (405)
T ss_pred CCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecC
Confidence 01 1 26877765 433 357899999999999999999999999887632 1 122222
Q ss_pred ----CCchhhh---hHHHHHhhc-cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-E
Q psy10669 174 ----TGEKILY---DYEEKINNA-VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-V 243 (337)
Q Consensus 174 ----~Gg~i~~---~l~~~i~~~-~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v 243 (337)
.||.++. ++.+++... ...+. ++++.....+. ..+ +..+.+.++..+|+..+++.|++. .+. |
T Consensus 211 ~~~~~~G~vv~~~~~l~~~l~~~~~~~g~--~~s~~~a~l~~---~gl--~tl~~r~~~~~~na~~la~~L~~~p~v~~V 283 (405)
T PRK08776 211 HSDVVGGAVVARDAELHQQLVWWANALGL--TGSPFDAFLTL---RGL--RTLDARLRVHQENADAIAALLDGHAAVNQV 283 (405)
T ss_pred CCCceEEEEEeCCHHHHHHHHHHHHhcCC--CCCHHHHHHHH---hhh--CcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 1455543 355555432 11121 22222222222 222 245678899999999999999874 332 3
Q ss_pred ecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 244 VTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 244 ~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
...+..+| ++.+.+. + +...+.+.++...+..
T Consensus 284 ~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~l~~ 330 (405)
T PRK08776 284 YYPGLASHPGHALAARQQKGFGAMLSFELE--G-GEAAVRAFVDGLRYFT 330 (405)
T ss_pred ECCCCCCCcCHHHHHhcCCCCceEEEEEEc--C-CHHHHHHHHHhCCcce
Confidence 22222322 5555554 3 3344556666655533
No 183
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=98.55 E-value=2.9e-05 Score=76.31 Aligned_cols=241 Identities=13% Similarity=0.084 Sum_probs=131.2
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
.-|.|-..++-. ++.+.+++...+...+ ..|....-..++.+...+.+.+-+|...... -+|.+++| ++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~ 102 (391)
T PRK07309 31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQ-------SHYTGMAGLLELRQAAADFVKEKYNLDYAPE-NEILVTIGATE 102 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHH
Confidence 345565555444 6778888876543211 1122222234555333334444445421100 15777777 67
Q ss_pred hHHHHHHhhCCc-------------------------------------------c-cc----cccEEEEc-Ccc-cccc
Q psy10669 108 ANFAVCEKALPT-------------------------------------------N-NA----RFDFLSSG-TTC-YSRC 137 (337)
Q Consensus 108 AN~~v~~aLl~~-------------------------------------------~-~a----~pklII~~-~S~-~~~~ 137 (337)
|+..++.+++++ + +. ++++|++. +++ .+..
T Consensus 103 al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~ 182 (391)
T PRK07309 103 ALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVT 182 (391)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcC
Confidence 877777887653 0 00 25777776 333 2455
Q ss_pred cC---hHHHHHHhhhcCCeEEEecccccccc------c---------eeeeec-c----CC---chhhh--hHHHHHhhc
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHISGLI------A---------GVKGVT-K----TG---EKILY--DYEEKINNA 189 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli------~---------g~~~T~-~----~G---g~i~~--~l~~~i~~~ 189 (337)
.+ +++|.++|+++|+++++|+++.--.. . .+..+. | .| |+++. ++.+.+...
T Consensus 183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~ 262 (391)
T PRK07309 183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKS 262 (391)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHH
Confidence 55 66677888999999999999753111 0 112222 2 13 66654 566655543
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-CcchHHHH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-KLTGSKVE 268 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-~~~~~~~~ 268 (337)
.+....+++.....++...+.+- .......+++..++.+++.+.|.+.|+.+... ..+-.+++.+... +.+..++.
T Consensus 263 -~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p-~gg~~~~~~l~~~~~~~~~~~~ 339 (391)
T PRK07309 263 -HQYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIKP-DGAFYIFAKIPAGYNQDSFKFL 339 (391)
T ss_pred -HhhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CeeEEEEEECCCCCCCCHHHHH
Confidence 23333344445555554444331 11224556777888888999999989887642 2233445565431 22445555
Q ss_pred H-HHhhcCceeccCc
Q psy10669 269 L-VLEEIAIACNKNT 282 (337)
Q Consensus 269 ~-~L~~~gI~v~~~~ 282 (337)
+ .+++.||.+.+..
T Consensus 340 ~~l~~~~gv~v~pg~ 354 (391)
T PRK07309 340 QDFARKKAVAFIPGA 354 (391)
T ss_pred HHHHHhCCEEEeCch
Confidence 4 4667899997633
No 184
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.55 E-value=2.8e-05 Score=74.93 Aligned_cols=233 Identities=13% Similarity=0.149 Sum_probs=143.2
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC---CCCCCCcceeecCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN---LDPEQWGCNVQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg---~~~~~~~~~v~~~S 104 (337)
...|.|-..||.. ||.+++++...+.... -++|+.. ...++ ++.++++++ .++ -+|..++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~-----~~~Y~~~--~~~~L----r~aia~~~~~~~~~~----~~i~it~ 83 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDT-----LRIYYDS--PDEEL----IEKILSYLDTDFLSK----NNVSVGN 83 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhh-----hhcCCCC--ChHHH----HHHHHHHhCCCCCCc----ceEEEcC
Confidence 4668888888877 8889998876432210 0112211 12333 356677777 544 3688889
Q ss_pred Cc-hhHHHHHHhhCCc-----------------------------c-----c-c-cccEEEEcCccc--ccccChHHHHH
Q psy10669 105 GS-PANFAVCEKALPT-----------------------------N-----N-A-RFDFLSSGTTCY--SRCLDYARFRQ 145 (337)
Q Consensus 105 gt-~AN~~v~~aLl~~-----------------------------~-----~-a-~pklII~~~S~~--~~~~d~~~l~e 145 (337)
|+ ++...++.++ .. + . . ++++|++..-++ +...+.+++.+
T Consensus 84 Ga~~~i~~~~~~~-d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~ 162 (335)
T PRK14808 84 GADEIIYVMMLMF-DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIER 162 (335)
T ss_pred CHHHHHHHHHHHh-CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHccCCCEEEEeCCCCCCCCCcCHHHHHH
Confidence 84 6766666666 21 0 0 0 146666653344 58888889999
Q ss_pred HhhhcCCeEEEeccccc--c--ccc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHH
Q psy10669 146 ICDETDSIMFADMSHIS--G--LIA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAI 203 (337)
Q Consensus 146 ia~~~ga~l~vD~AH~~--G--li~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~i 203 (337)
|+ +++.++++|++..- + ... .+..|. | .| |++++ ++.+.+.....+ .+ .+.+..
T Consensus 163 l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~--~~-~~~~~q 238 (335)
T PRK14808 163 IL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP--FN-VSYVSQ 238 (335)
T ss_pred HH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC--CC-CCHHHH
Confidence 98 57999999999641 1 111 122332 2 23 77766 577777654333 22 333444
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-
Q psy10669 204 GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT- 282 (337)
Q Consensus 204 aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~- 282 (337)
.+...++... ..+++..+++.++-+.+.+.|.+.|+++.. ++...+++.+... +..++.+.|.+.||.|....
T Consensus 239 ~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~g~f~~~~l~~~--~~~~~~~~l~~~Gi~V~~~~~ 312 (335)
T PRK14808 239 MFAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITD--SRGNFVFIFMEKE--EKERLLEHLRAKNIAVRSFRE 312 (335)
T ss_pred HHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCeEEEEeCCCc--cHHHHHHHHHHCCeEEEECCC
Confidence 4444444321 234666778888888899999999988765 4556667777632 45678888888999998543
Q ss_pred ccchhh
Q psy10669 283 GISLAA 288 (337)
Q Consensus 283 girig~ 288 (337)
++||+.
T Consensus 313 ~~Risi 318 (335)
T PRK14808 313 GVRITI 318 (335)
T ss_pred CeEEec
Confidence 788853
No 185
>PRK08960 hypothetical protein; Provisional
Probab=98.55 E-value=3.8e-05 Score=75.26 Aligned_cols=236 Identities=11% Similarity=-0.000 Sum_probs=130.6
Q ss_pred cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----C--CCCCCCccee
Q psy10669 29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----N--LDPEQWGCNV 100 (337)
Q Consensus 29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g--~~~~~~~~~v 100 (337)
....+.|-..++- +++.|.+++...+.+. ..++ ....-..++. +.+++++ | +++ -+|
T Consensus 31 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~Y------~~~~g~~~lr----~~ia~~~~~~~g~~~~~----~~i 95 (387)
T PRK08960 31 GHDVIHLEIGEPDFTTAEPIVAAGQAALAAG-HTRY------TAARGLPALR----EAIAGFYAQRYGVDVDP----ERI 95 (387)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCcc------CCCCCCHHHH----HHHHHHHHHHhCCCCCh----hhE
Confidence 3456777776665 4889999998765432 1111 1111223333 3344444 3 333 258
Q ss_pred ecCCC-chhHHHHHHhhCCc-----------------------------------------cc----c-cccEEE-EcCc
Q psy10669 101 QPYSG-SPANFAVCEKALPT-----------------------------------------NN----A-RFDFLS-SGTT 132 (337)
Q Consensus 101 ~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~----a-~pklII-~~~S 132 (337)
.+++| +++...++.+++++ .+ . ++++++ +.+.
T Consensus 96 ~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 175 (387)
T PRK08960 96 LVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPA 175 (387)
T ss_pred EEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCC
Confidence 88888 57776667888654 00 0 144444 4444
Q ss_pred c-cccccChHH---HHHHhhhcCCeEEEecccccccc---------c-----eeeeec-c-------CCchhhh--hHHH
Q psy10669 133 C-YSRCLDYAR---FRQICDETDSIMFADMSHISGLI---------A-----GVKGVT-K-------TGEKILY--DYEE 184 (337)
Q Consensus 133 ~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli---------~-----g~~~T~-~-------~Gg~i~~--~l~~ 184 (337)
+ .+...|.++ |.++|+++|+++++|+++.- +. . .+.+|. | +.|+++. ++.+
T Consensus 176 NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 254 (387)
T PRK08960 176 NPTGTLLSRDELAALSQALRARGGHLVVDEIYHG-LTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVP 254 (387)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHH
Confidence 4 246666665 55668899999999998632 11 1 122332 2 2356554 4555
Q ss_pred HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcch
Q psy10669 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG 264 (337)
Q Consensus 185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~ 264 (337)
.+.....+...+ ++.+...+...++..-.....++.++++.++.+.+.+.|.+.|+.+......+-.+++++...+.+.
T Consensus 255 ~~~~~~~~~~~~-~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~ 333 (387)
T PRK08960 255 ELEKLAQNLYIS-ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDA 333 (387)
T ss_pred HHHHHHhhhccC-CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCH
Confidence 554432222222 2333333333344321112335567778888888999999888765322234556778876533456
Q ss_pred HHHHHH-HhhcCceeccC
Q psy10669 265 SKVELV-LEEIAIACNKN 281 (337)
Q Consensus 265 ~~~~~~-L~~~gI~v~~~ 281 (337)
.++.+. |+++||.+.+-
T Consensus 334 ~~~~~~ll~~~gi~v~pg 351 (387)
T PRK08960 334 FAFCRHFLETEHVAFTPG 351 (387)
T ss_pred HHHHHHHHHhCCEEEcCc
Confidence 666655 56789999863
No 186
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.55 E-value=2e-05 Score=76.49 Aligned_cols=252 Identities=12% Similarity=0.057 Sum_probs=134.6
Q ss_pred hhhhhhcHHHHHHHH-HHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669 9 GTLAQTDPELYSLIK-KEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS 85 (337)
Q Consensus 9 ~~l~~~d~~~~~~~~-~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~ 85 (337)
+.+..+.+..+.-++ .........++|-..+... +|.+++++...... .+|+. ..|. .++.....+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~---~~lr~~ia~~l 75 (364)
T PRK07865 5 ARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAGT---PELREAIVGWL 75 (364)
T ss_pred ccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccCC---HHHHHHHHHHH
Confidence 345555665554444 3334434456665544333 57788887653211 11111 1222 22322222344
Q ss_pred HhhcC---CCCCCCcceeecCCCch-hHHHHHHhh-CCc--------------------------------ccc--cccE
Q psy10669 86 LKAFN---LDPEQWGCNVQPYSGSP-ANFAVCEKA-LPT--------------------------------NNA--RFDF 126 (337)
Q Consensus 86 a~lfg---~~~~~~~~~v~~~Sgt~-AN~~v~~aL-l~~--------------------------------~~a--~pkl 126 (337)
.+.+| .+. .+|.+++|++ +...+..++ +++ .+. ++++
T Consensus 76 ~~~~~~~~~~~----~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~ 151 (364)
T PRK07865 76 ARRRGVTGLDP----AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADSLTELGPQRPAL 151 (364)
T ss_pred HHHcCCCCCCc----ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCChhhCCcccceE
Confidence 44445 333 2688999964 544444555 443 111 2677
Q ss_pred EEEcCccc--ccccChHH---HHHHhhhcCCeEEEeccccc--------ccc-----c------eeeeec-c-------C
Q psy10669 127 LSSGTTCY--SRCLDYAR---FRQICDETDSIMFADMSHIS--------GLI-----A------GVKGVT-K-------T 174 (337)
Q Consensus 127 II~~~S~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~--------Gli-----~------g~~~T~-~-------~ 174 (337)
|++..-.+ +...+.++ |.++|+++|+++++|++|.- +.+ + .+++|. | +
T Consensus 152 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 231 (364)
T PRK07865 152 IWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYR 231 (364)
T ss_pred EEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCcee
Confidence 77752233 35556554 55678899999999999872 111 0 112222 2 2
Q ss_pred Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeE
Q psy10669 175 GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHL 252 (337)
Q Consensus 175 Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~ 252 (337)
.|++++ ++.+.+......... +.+.+..+++..++.. ....++.++...++.+.+.+.|.+.|+.+..+ ..+-.
T Consensus 232 iG~i~~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~ 307 (364)
T PRK07865 232 AGFVAGDPALVAELLEVRKHAGM-MVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHS-EAGLY 307 (364)
T ss_pred eEEEecCHHHHHHHHHHHHhcCC-CcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CccEE
Confidence 477766 466655543221112 2233444444443322 12335667778888889999999999887642 22334
Q ss_pred EEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 253 ILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
+++.+. .+..+..+.|.+.||.+.+
T Consensus 308 ~~~~~~---~~~~~~~~~l~~~gv~v~p 332 (364)
T PRK07865 308 LWATRG---EDCWDTVAWLAERGILVAP 332 (364)
T ss_pred EEEeCC---CCHHHHHHHHHHCCEEEeC
Confidence 556552 2456677888888999876
No 187
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.54 E-value=1.1e-06 Score=87.59 Aligned_cols=120 Identities=12% Similarity=0.006 Sum_probs=81.1
Q ss_pred eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669 34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC 113 (337)
Q Consensus 34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~ 113 (337)
.+..|-.|.-+...+... .+..+. .++.-+|. ++...+++| +++++++|.++ .+.+.||+.|...++
T Consensus 24 pi~~~~~~~~~~~~~~~~-~~~~~~-~~~~y~r~--~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al 90 (425)
T PRK06084 24 PIYQTTSYAFDDTQHGAD-LFDLKV-PGNIYTRI--MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAI 90 (425)
T ss_pred CEeCCCCcccCCHHHHHH-hhcccc-CCccccCC--CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHH
Confidence 456666666444322221 111121 13333443 445567787 58899999875 688899999988888
Q ss_pred HhhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhh
Q psy10669 114 EKALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICD 148 (337)
Q Consensus 114 ~aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~ 148 (337)
.+++++ +.+ ++|+|++. .++ .+...|+++|.++|+
T Consensus 91 ~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~ 170 (425)
T PRK06084 91 QTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAH 170 (425)
T ss_pred HHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHH
Confidence 888654 111 26888875 323 468889999999999
Q ss_pred hcCCeEEEeccccccccc
Q psy10669 149 ETDSIMFADMSHISGLIA 166 (337)
Q Consensus 149 ~~ga~l~vD~AH~~Gli~ 166 (337)
++|+++++|++|..|+..
T Consensus 171 ~~~i~vVvD~a~a~~~~~ 188 (425)
T PRK06084 171 RHGVPLIVDNTVATPVLC 188 (425)
T ss_pred HcCCEEEEECCCcccccC
Confidence 999999999999988654
No 188
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=98.54 E-value=9.4e-06 Score=77.89 Aligned_cols=190 Identities=15% Similarity=0.152 Sum_probs=114.5
Q ss_pred HHHHHhhcCCCCCCCcceeecCCCch-hHHHHHHhhCCc----------------------------------c-ccccc
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSGSP-ANFAVCEKALPT----------------------------------N-NARFD 125 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~-AN~~v~~aLl~~----------------------------------~-~a~pk 125 (337)
|+.+++++|.+. .++.+++|+. +...+..+ +.+ + ..+++
T Consensus 53 r~~la~~~~~~~----~~i~~t~G~~~~i~~~~~~-l~~g~vl~~~p~y~~~~~~~~~~g~~~~~~~d~~~l~~~~~~~~ 127 (330)
T TIGR01140 53 RAAAAAYYGLPA----ASVLPVNGAQEAIYLLPRL-LAPGRVLVLAPTYSEYARAWRAAGHEVVELPDLDRLPAALEELD 127 (330)
T ss_pred HHHHHHHhCCCh----hhEEECCCHHHHHHHHHHH-hCCCeEEEeCCCcHHHHHHHHHcCCEEEEeCCHHHHHhhcccCC
Confidence 467888999875 3788999965 45554444 332 0 11256
Q ss_pred EEEE-cCcc-cccccChHH---HHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhh
Q psy10669 126 FLSS-GTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKIL 179 (337)
Q Consensus 126 lII~-~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~ 179 (337)
+|++ .+++ .+...|.++ |.++|+++|+++++|++|...... .+++|+ | .| |+++
T Consensus 128 ~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~ 207 (330)
T TIGR01140 128 VLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVV 207 (330)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhhee
Confidence 5544 4543 357888555 557778999999999998522111 122333 2 23 5555
Q ss_pred h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCeEEEE
Q psy10669 180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVHLILI 255 (337)
Q Consensus 180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h~v~V 255 (337)
. ++.+.+... ++.. +.+.+..+++...+ ...++ +..++++.++.+.+.+.|++.| +++.. .....+++
T Consensus 208 ~~~~~~~~l~~~-~~~~--~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~f~~~ 279 (330)
T TIGR01140 208 AHPALLARLREA-LGPW--TVNGPARAAGRAAL---ADTAWQAATRARLAAERARLAALLARLGGLEVVG--GTALFLLV 279 (330)
T ss_pred CCHHHHHHHHhc-CCCC--CchHHHHHHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHHhCCCceECC--CCCeEEEE
Confidence 4 566666654 2221 22333333333332 23334 5667888899999999999987 55543 34566777
Q ss_pred EecCCCcchHHHHHHHhhcCceeccCc--------ccchhh
Q psy10669 256 DLRKNKLTGSKVELVLEEIAIACNKNT--------GISLAA 288 (337)
Q Consensus 256 ~~~~~~~~~~~~~~~L~~~gI~v~~~~--------girig~ 288 (337)
++.. ..++.+.|.+.||.+.+.. .|||+.
T Consensus 280 ~~~~----~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~ 316 (330)
T TIGR01140 280 RTPD----AAALHEALARRGILIRDFDNFPGLDPRYLRFAL 316 (330)
T ss_pred EcCC----HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEe
Confidence 7652 4577788888899987643 477754
No 189
>PLN02263 serine decarboxylase
Probab=98.54 E-value=5.2e-06 Score=83.30 Aligned_cols=183 Identities=13% Similarity=0.111 Sum_probs=119.3
Q ss_pred CCCCCCcCcCccc--hHHHHHHHHHHHHHhhcCCCCC-CCcceeecCCCchhHHHHHHhh---CCc--------------
Q psy10669 60 EGLPGKRYYGGNQ--FIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPYSGSPANFAVCEKA---LPT-------------- 119 (337)
Q Consensus 60 ~g~~g~r~~~G~~--~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~Sgt~AN~~v~~aL---l~~-------------- 119 (337)
..+.|-.+..++. ...++|....+-++++||.+.. -|| +..++||.+|+..+.+- .+.
T Consensus 115 ~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~ 192 (470)
T PLN02263 115 INNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF 192 (470)
T ss_pred ccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH
Confidence 3444544444443 3468898888899999999753 364 44456699997665543 110
Q ss_pred --------------------------c--cc----cccEEEEc--CcccccccChHHHHHHhhhcCC-----eEEEeccc
Q psy10669 120 --------------------------N--NA----RFDFLSSG--TTCYSRCLDYARFRQICDETDS-----IMFADMSH 160 (337)
Q Consensus 120 --------------------------~--~a----~pklII~~--~S~~~~~~d~~~l~eia~~~ga-----~l~vD~AH 160 (337)
+ +. +|-+||++ .+..+..-|+++|.+||+++|. +|.||+|.
T Consensus 193 KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~ 272 (470)
T PLN02263 193 KAARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL 272 (470)
T ss_pred HHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc
Confidence 0 00 15455444 4556899999999999999997 99999998
Q ss_pred cccccc---------e---e----eeecc-----CC-chhhh-h-HH-------HHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669 161 ISGLIA---------G---V----KGVTK-----TG-EKILY-D-YE-------EKINNAVFPSLQGGPHNHAIGAIATA 209 (337)
Q Consensus 161 ~~Gli~---------g---~----~~T~~-----~G-g~i~~-~-l~-------~~i~~~~~p~~~g~~~~~~iaala~a 209 (337)
+..++. + + +..|| .+ |+++. + .. +.+... -+.+.|+=+....+.+-..
T Consensus 273 GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~-d~ti~gSR~g~~al~lW~~ 351 (470)
T PLN02263 273 FGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR-DATIMGSRNGHAPIFLWYT 351 (470)
T ss_pred hhhHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCC-CCCcCCCCCcHHHHHHHHH
Confidence 665553 1 1 12232 12 44432 1 11 122221 2455566555555666666
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669 210 MLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT 245 (337)
Q Consensus 210 ~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~ 245 (337)
++..-...|++..++.+++|++|.+.|++.|+.+..
T Consensus 352 L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~ 387 (470)
T PLN02263 352 LNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAML 387 (470)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 777666788999999999999999999999999875
No 190
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=98.54 E-value=3.2e-06 Score=83.10 Aligned_cols=155 Identities=14% Similarity=0.084 Sum_probs=102.3
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +.+++++|.+. .+.+.||+.|+..++.+++++
T Consensus 49 ~~p~~~~le----~~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~ 119 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVL 119 (382)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEE
Confidence 556667787 57789999654 466677789988888888764
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|+.. .++++. |
T Consensus 120 ~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l 199 (382)
T TIGR02080 120 FVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYL 199 (382)
T ss_pred EECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceec
Confidence 001 26887775 433 358899999999999999999999999888643 122222 2
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.+|+++. ++.+++.... . ..|....+.-+.++ +..+ .....++++..+|+..+++.|.+.
T Consensus 200 ~G~~~~~~G~i~~~~~~~~~~l~~~~-~-~~g~~~sp~~a~l~--lr~l--~tl~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 200 NGHSDVIAGAVIAKDPQVAEELAWWA-N-NLGVTGGAFDSYLT--LRGL--RTLVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred cCCCCceeEEEEeCCHHHHHHHHHHH-H-ccCCCCCHHHHHHH--Hccc--chHHHHHHHHHHHHHHHHHHHHhC
Confidence 2565543 4555554321 1 12333334444433 3333 245677888899999999999984
No 191
>PRK09105 putative aminotransferase; Provisional
Probab=98.53 E-value=1.9e-05 Score=77.18 Aligned_cols=229 Identities=14% Similarity=0.075 Sum_probs=138.6
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
..+.|-..||.. +|.|.+++...+. .. .+ |.-. ...+ .++.+++++|.+. -+|.+++| ++
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~------~~-Y~~~-~~~~----Lr~aia~~~~v~~----e~I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAA-LS------GR-YDLE-LEDD----LRTLFAAQEGLPA----DHVMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHH-Hh------cC-CCCc-hHHH----HHHHHHHHhCcCh----hhEEEcCChHH
Confidence 347777777754 8999999976532 21 11 2211 1223 3457788899876 36888888 56
Q ss_pred hHHHHHHhhCCc---------------------------------------cc--c--cccEEEE-cCcc-cccccChHH
Q psy10669 108 ANFAVCEKALPT---------------------------------------NN--A--RFDFLSS-GTTC-YSRCLDYAR 142 (337)
Q Consensus 108 AN~~v~~aLl~~---------------------------------------~~--a--~pklII~-~~S~-~~~~~d~~~ 142 (337)
+...++.+++++ ++ + ++++|++ ++++ -+...+.++
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~ 186 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAADPNAGLIYICNPNNPTGTVTPRAD 186 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHH
Confidence 777777777653 01 1 2466655 4533 258888898
Q ss_pred HHHHhhh--cCCeEEEeccccc--cc---cc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669 143 FRQICDE--TDSIMFADMSHIS--GL---IA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 143 l~eia~~--~ga~l~vD~AH~~--Gl---i~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~ 197 (337)
+.++++. +|+++++|+++.- +. .. .+..|+ | .| |+++. ++.+.+... . ..+
T Consensus 187 l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~---~~~ 262 (370)
T PRK09105 187 IEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-G---HNP 262 (370)
T ss_pred HHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-C---CCC
Confidence 8888753 4899999999831 10 00 122333 2 23 67665 566666654 1 123
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
+..+...+...++.+ ....++.++++.++.+.+.+.|.+.|+++.. ++...++++++ .+..++.+.|.+.||.
T Consensus 263 ~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~~f~~~~~~---~~~~~l~~~L~~~gI~ 335 (370)
T PRK09105 263 LPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTP--SQANCFMVDVK---RPAKAVADAMAKQGVF 335 (370)
T ss_pred cCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCC--CCCcEEEEeCC---CCHHHHHHHHHHCCcE
Confidence 444444444444432 1223566778888999999999999998765 33444456654 2567777888777999
Q ss_pred eccCc-----ccchh
Q psy10669 278 CNKNT-----GISLA 287 (337)
Q Consensus 278 v~~~~-----girig 287 (337)
+.... .+||+
T Consensus 336 v~~~~~~~~~~~Ris 350 (370)
T PRK09105 336 IGRSWPIWPNWVRVT 350 (370)
T ss_pred EecCCCCCCCeEEEE
Confidence 84211 56665
No 192
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.53 E-value=9.3e-06 Score=79.46 Aligned_cols=157 Identities=13% Similarity=0.077 Sum_probs=89.9
Q ss_pred ccEEEEcCccc-----c-cccChHHHHHHhhhcCCeEEEeccccccc--cc--------ee---eeec-c-------CCc
Q psy10669 124 FDFLSSGTTCY-----S-RCLDYARFRQICDETDSIMFADMSHISGL--IA--------GV---KGVT-K-------TGE 176 (337)
Q Consensus 124 pklII~~~S~~-----~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~---~~T~-~-------~Gg 176 (337)
+++|++.+... + -...+++|+++|+++|++|++|++|. |+ -+ ++ ..|. | -|+
T Consensus 183 ~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G~rig~ 261 (396)
T PRK02627 183 TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMTLAKGLGGGVPIGA 261 (396)
T ss_pred eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEEEcchhhCCcccEE
Confidence 46777764321 1 12246788899999999999999997 33 11 10 0111 2 122
Q ss_pred hhhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEec-CCCCCeE
Q psy10669 177 KILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVT-GGTDVHL 252 (337)
Q Consensus 177 ~i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~-~~t~~h~ 252 (337)
++.. ++.+.+........+ +.++...++...++..+.. .++.+++.++.+++.+.|.+.. +.... ......+
T Consensus 262 ~~~~~~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~ 337 (396)
T PRK02627 262 VLAKEKVADVFTPGDHGSTF-GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLM 337 (396)
T ss_pred EEEcHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEE
Confidence 2222 455555432222223 3455666666666655432 3567888888888888887642 21111 1123445
Q ss_pred EEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669 253 ILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAA 288 (337)
Q Consensus 253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~ 288 (337)
+++.+. .+..++.+.|.+.||.+.+.. .+||..
T Consensus 338 ~~i~~~---~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~ 372 (396)
T PRK02627 338 IGIELD---RPAAEIVKKALEKGLLINVTGDNVLRLLP 372 (396)
T ss_pred EEEEec---CcHHHHHHHHHHCCeEEeecCCCEEEEEC
Confidence 666662 245667777777799997643 477754
No 193
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=98.53 E-value=3.2e-06 Score=83.23 Aligned_cols=190 Identities=13% Similarity=0.111 Sum_probs=116.8
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+.+| +++++++|.+. .+.+.||+.|+..++.+++++
T Consensus 50 ~~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~ 120 (386)
T PRK08045 50 GNPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL 120 (386)
T ss_pred CCccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEE
Confidence 445567777 58889999753 577788899988888888754
Q ss_pred ----------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669 120 ----------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~-- 173 (337)
+.+ ++|+|++...++ +...|+++|.++|+++|++++||+++..|... | +.+++|
T Consensus 121 ~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l 200 (386)
T PRK08045 121 FVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYL 200 (386)
T ss_pred EeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceec
Confidence 000 268787763333 47899999999999999999999999888654 1 223322
Q ss_pred ---C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-
Q psy10669 174 ---T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH- 242 (337)
Q Consensus 174 ---~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~- 242 (337)
. ||.++. ++.+++..... . .|....+.-+.+ ++.-+ .....++++..+|+..+++.|++. .++
T Consensus 201 ~G~~d~~~G~vi~~~~~~~~~l~~~~~-~-~g~~~~p~~~~l--~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~ 274 (386)
T PRK08045 201 NGHSDVVAGVVIAKDPDVVTELAWWAN-N-IGVTGGAFDSYL--LLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKK 274 (386)
T ss_pred cCCCCceeEEEEeCcHHHHHHHHHHHH-h-cCCCCCHHHHHH--HHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeE
Confidence 1 455543 45554442211 1 122222222222 22222 235688999999999999999984 332
Q ss_pred EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 243 VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 243 v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
|...+..+| ++.+.+. + +...+.+.++...+.
T Consensus 275 V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~~~ 321 (386)
T PRK08045 275 LYHPSLPENQGHEIAARQQKGFGAMLSFELD--G-DEQTLRRFLGGLSLF 321 (386)
T ss_pred EECCCCCCCcCHHHHHHhCCCCCceEEEEec--C-cHHHHHHHHHhccce
Confidence 333333333 5555554 3 334455666654443
No 194
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=98.51 E-value=8.7e-06 Score=78.83 Aligned_cols=192 Identities=15% Similarity=0.088 Sum_probs=116.5
Q ss_pred HHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhCCc------------------------------------------
Q psy10669 83 QRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKALPT------------------------------------------ 119 (337)
Q Consensus 83 ~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl~~------------------------------------------ 119 (337)
+.+++++|++. -+|.+++|+ ++...++.+++++
T Consensus 67 ~aia~~~~~~~----~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l 142 (354)
T PRK04635 67 NAYSAYAGVAP----EQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYI 142 (354)
T ss_pred HHHHHHhCcCH----HHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHH
Confidence 57778899987 379999995 6766666777542
Q ss_pred c-cccccEEEEcCccc--ccccChHHHHHHhhhc-CCeEEEeccccccc--------cc-----eeeeeccC-----C--
Q psy10669 120 N-NARFDFLSSGTTCY--SRCLDYARFRQICDET-DSIMFADMSHISGL--------IA-----GVKGVTKT-----G-- 175 (337)
Q Consensus 120 ~-~a~pklII~~~S~~--~~~~d~~~l~eia~~~-ga~l~vD~AH~~Gl--------i~-----g~~~T~~~-----G-- 175 (337)
+ ..++|+|++..-++ +...|.+++.+|++.. ++++++|+++.--. +. .+..|+.| |
T Consensus 143 ~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlR 222 (354)
T PRK04635 143 EQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGAR 222 (354)
T ss_pred HhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHH
Confidence 0 01367777763233 5899999999998764 69999999973211 11 12334322 3
Q ss_pred -chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCe
Q psy10669 176 -EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVH 251 (337)
Q Consensus 176 -g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h 251 (337)
|+++. ++.+.++....|. + .+.+...+...++.+-.....++.++++.++.++|.+.|.+.| +.+.. ++..
T Consensus 223 lG~~i~~~~~~~~l~~~~~~~--~-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~g~ 297 (354)
T PRK04635 223 CGFTLANEELIEILMRVIAPY--P-VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLE--GNGN 297 (354)
T ss_pred HhhhhCCHHHHHHHHhhcCCC--C-CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECC--CCCc
Confidence 56554 5766666543332 2 2222222222222211001234556677888889999999875 77664 3344
Q ss_pred EEEEEecCCCcchHHHHHHHhhcCceeccCc------ccchh
Q psy10669 252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT------GISLA 287 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------girig 287 (337)
.+++.+. +..++.+.|.+.||.++... .+||+
T Consensus 298 f~~~~~~----~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis 335 (354)
T PRK04635 298 YVLAKFD----DVDAVFKALWDAGIVARAYKDPRLANCIRFS 335 (354)
T ss_pred EEEEECC----CHHHHHHHHHHCCEEEEECCCCCCCCeEEEE
Confidence 5666664 35677888888999986432 46765
No 195
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.50 E-value=3.6e-06 Score=91.28 Aligned_cols=201 Identities=13% Similarity=0.127 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----C-----c--------------------------
Q psy10669 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----P-----T-------------------------- 119 (337)
Q Consensus 75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----~-----~-------------------------- 119 (337)
.+++...++.+++++|.+. +.+++.+|+++|++.+.++- . +
T Consensus 541 l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~ 616 (954)
T PRK05367 541 RELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV 616 (954)
T ss_pred HHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence 3566666789999999986 67888888888866554442 0 0
Q ss_pred ------------cc----c----cccEEEEc-Cccccc-ccChHHHHHHhhhcCCeEEEeccccccccc-------e---
Q psy10669 120 ------------NN----A----RFDFLSSG-TTCYSR-CLDYARFRQICDETDSIMFADMSHISGLIA-------G--- 167 (337)
Q Consensus 120 ------------~~----a----~pklII~~-~S~~~~-~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g--- 167 (337)
.+ . ++..|+++ ++.++. ..|+++|.++|+++|++++||.||..|+++ |
T Consensus 617 v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi 696 (954)
T PRK05367 617 VACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADV 696 (954)
T ss_pred ECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCE
Confidence 01 0 13444444 555554 468999999999999999999999977666 1
Q ss_pred eeee-cc-----C-C-----chhhh--hHHHHHhhc-----cCCCCCCCCcHHHH--HHH---HHHHHHHh-chhhHHHH
Q psy10669 168 VKGV-TK-----T-G-----EKILY--DYEEKINNA-----VFPSLQGGPHNHAI--GAI---ATAMLQAQ-SDEFKSYQ 222 (337)
Q Consensus 168 ~~~T-~~-----~-G-----g~i~~--~l~~~i~~~-----~~p~~~g~~~~~~i--aal---a~a~~e~~-~~~~~~y~ 222 (337)
+.+. || . | |++.. .+...+... .++.-.|+.....+ +.. +.....++ ....++..
T Consensus 697 ~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a 776 (954)
T PRK05367 697 SHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQAT 776 (954)
T ss_pred EEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 2222 32 1 2 24432 233322211 11111122221111 111 22222222 24456777
Q ss_pred HHHHHHHHHHHHHHHhCCCEEec---CCCCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669 223 AQVKANASHLSDEMIKRGYHVVT---GGTDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 223 ~~v~~na~~l~~~L~~~G~~v~~---~~t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~ 280 (337)
++.+.||++++++|.+ ++++.. ++..-|-.++++.. .+.+..++.++|.++||....
T Consensus 777 ~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t 840 (954)
T PRK05367 777 EVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPT 840 (954)
T ss_pred HHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEee
Confidence 7788899999999987 466644 22446677788753 135668899999999998764
No 196
>PRK05939 hypothetical protein; Provisional
Probab=98.50 E-value=1.7e-06 Score=85.45 Aligned_cols=87 Identities=20% Similarity=0.120 Sum_probs=70.3
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+++| ++++++.|.++ ++.++||+.|+.+++.+++++
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~ 115 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTM 115 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEE
Confidence 778889999 58899999986 699999999998888888764
Q ss_pred ---------ccc---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669 120 ---------NNA---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLI 165 (337)
Q Consensus 120 ---------~~a---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli 165 (337)
+.+ ++|+|++.. ++ .+...|+++|.++|+++|+++++|++|.+|+.
T Consensus 116 v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~ 175 (397)
T PRK05939 116 VDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL 175 (397)
T ss_pred ECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc
Confidence 111 268888763 33 34678999999999999999999999988754
No 197
>PRK09028 cystathionine beta-lyase; Provisional
Probab=98.49 E-value=1.9e-06 Score=85.07 Aligned_cols=154 Identities=15% Similarity=0.052 Sum_probs=102.4
Q ss_pred cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------
Q psy10669 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------- 119 (337)
Q Consensus 71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------- 119 (337)
+.....+| ++++++.|.+. .+.++||+.|+..++.+++++
T Consensus 60 npt~~~Le----~~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~ 130 (394)
T PRK09028 60 TPTHFAFQ----AAIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTY 130 (394)
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEE
Confidence 44456777 57788888764 577888999988888998765
Q ss_pred ---------c-cc--cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc---
Q psy10669 120 ---------N-NA--RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--- 173 (337)
Q Consensus 120 ---------~-~a--~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--- 173 (337)
+ .. ++|+|++. +++. ....|+++|.++|+++|++++||.+|.+|+.- | +.+.+|
T Consensus 131 v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~ 210 (394)
T PRK09028 131 YDPMIGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIV 210 (394)
T ss_pred ECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEec
Confidence 0 01 27888887 4333 35788999999999999999999999998644 2 233333
Q ss_pred -----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 -----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 -----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||.+.. ++.+++..... ..|+...|.-|.+. +.-+ ....-++++..+||..+++.|++.
T Consensus 211 Gh~d~~~G~~~~~~~~~~~l~~~~~--~~G~~~~p~~a~l~--~rgl--~TL~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 211 GHSDVMLGTATANEKHWDQLREHSY--LMGQCTSPDDVYLA--MRGL--RTLGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHH--Hccc--CcHHHHHHHHHHHHHHHHHHHhcC
Confidence 2554443 34444443211 23343334433332 2233 346788999999999999999984
No 198
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.48 E-value=1.4e-05 Score=79.71 Aligned_cols=151 Identities=10% Similarity=0.103 Sum_probs=88.4
Q ss_pred cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEeccccccccce---------e----eeec-------cCCch
Q psy10669 125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHISGLIAG---------V----KGVT-------KTGEK 177 (337)
Q Consensus 125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~~Gli~g---------~----~~T~-------~~Gg~ 177 (337)
..||+. +++++. .+ +++|+++|+++|+++++|+.|. |+..| + ...+ +.|++
T Consensus 199 aaiivE-pv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~ 276 (426)
T PRK00062 199 AAVIVE-PVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAF 276 (426)
T ss_pred EEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcchHhhhhHhhCCCcceee
Confidence 356664 456553 34 5678899999999999999996 65221 1 1111 22333
Q ss_pred hhh-hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCC
Q psy10669 178 ILY-DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDV 250 (337)
Q Consensus 178 i~~-~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~ 250 (337)
+.. ++.+.++.. .+-+.+-+.++...++...++..+.+ + +..+++.++.++|++.|++ .++.+.. ....
T Consensus 277 ~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v-rg~G 352 (426)
T PRK00062 277 GGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-P--GFYEELEALTKRLAEGLKEAAKKAGIPLTV-NRVG 352 (426)
T ss_pred eEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-c--hHHHHHHHHHHHHHHHHHHHHHHcCCceEE-EEec
Confidence 222 566666421 12111224666666666666665533 2 6788999999999998875 3554311 1244
Q ss_pred eEEEEEecCCCc------------chHHHHHHHhhcCceeccC
Q psy10669 251 HLILIDLRKNKL------------TGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 251 h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~~ 281 (337)
.+..|.+.+... ....+...|.+.||.+.+.
T Consensus 353 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~ 395 (426)
T PRK00062 353 SMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS 395 (426)
T ss_pred ceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC
Confidence 455565543211 1245677777889999763
No 199
>PRK07681 aspartate aminotransferase; Provisional
Probab=98.48 E-value=9.6e-05 Score=72.75 Aligned_cols=239 Identities=12% Similarity=0.021 Sum_probs=131.6
Q ss_pred cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCC
Q psy10669 29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYS 104 (337)
Q Consensus 29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~S 104 (337)
....+.|-..++. .++.+++++...+.+.-..+++ ..|..... |.++ +.+.+-+|. +++ .+|.+++
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~----~~G~~~lr--~aia-~~~~~~~g~~~~~~---~~I~it~ 100 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT----LSGIQEFH--EAVT-EYYNNTHNVILNAD---KEVLLLM 100 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC----CCCcHHHH--HHHH-HHHHHHhCCCCCCC---CeEEECC
Confidence 3455777666654 4788888887654321001121 12332221 1111 233333343 321 1588888
Q ss_pred Cc-hhHHHHHHhhCCc-----------------------------------------cc-----ccccEEEEc-Ccc-cc
Q psy10669 105 GS-PANFAVCEKALPT-----------------------------------------NN-----ARFDFLSSG-TTC-YS 135 (337)
Q Consensus 105 gt-~AN~~v~~aLl~~-----------------------------------------~~-----a~pklII~~-~S~-~~ 135 (337)
|+ ++...++.+++++ .+ .++|+|++. +.+ -+
T Consensus 101 G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG 180 (399)
T PRK07681 101 GSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVP 180 (399)
T ss_pred CcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcC
Confidence 85 6766667777654 01 026888876 433 24
Q ss_pred cccChH---HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c-------CCchhhh--hHHHH
Q psy10669 136 RCLDYA---RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K-------TGEKILY--DYEEK 185 (337)
Q Consensus 136 ~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-------~Gg~i~~--~l~~~ 185 (337)
...+.+ +|.++|+++|+++++|+++.--... .+.+|. | +-|+++. ++.+.
T Consensus 181 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~ 260 (399)
T PRK07681 181 AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRA 260 (399)
T ss_pred cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHH
Confidence 677744 4567789999999999998621111 112232 2 1266665 46665
Q ss_pred HhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchH
Q psy10669 186 INNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 186 i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~ 265 (337)
+..... ....+++.+...++..++..- ....++.++.+.++.+++.+.|.+.|+++... ..+..+++++.. +.+..
T Consensus 261 ~~~~~~-~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~~g~f~~~~l~~-~~~~~ 336 (399)
T PRK07681 261 LTQFKS-NTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP-AGSMFVWAEIPK-GWTSL 336 (399)
T ss_pred HHHHHh-hcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeeeEEEEECCC-CCCHH
Confidence 554321 111123333334444444321 12335667777888899999999999876532 346667788764 44566
Q ss_pred HHHHHHh-hcCceeccC
Q psy10669 266 KVELVLE-EIAIACNKN 281 (337)
Q Consensus 266 ~~~~~L~-~~gI~v~~~ 281 (337)
++...|. ++||.+.+-
T Consensus 337 ~~~~~l~~~~gv~v~pg 353 (399)
T PRK07681 337 SFAYALMDRANVVVTPG 353 (399)
T ss_pred HHHHHHHHhCCEEEeCC
Confidence 6666655 489998763
No 200
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=98.48 E-value=5.2e-05 Score=74.81 Aligned_cols=249 Identities=14% Similarity=0.087 Sum_probs=138.2
Q ss_pred HHHHHHHHHhhcccceeeeccC-----C-CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669 18 LYSLIKKEKHRQINGIELIASE-----N-FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL 91 (337)
Q Consensus 18 ~~~~~~~e~~rq~~~i~l~ase-----n-~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~ 91 (337)
+.+.+.+....+.+.|.|-..+ + ..++.+.+++...+......+ |.......++ |+.++++++.
T Consensus 19 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~------Y~~~~g~~~l----r~~ia~~l~~ 88 (403)
T TIGR01265 19 IVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNG------YAPSVGALAA----REAVAEYLSS 88 (403)
T ss_pred HHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCC------CCCCCCCHHH----HHHHHHHHHh
Confidence 4444444444556677777664 2 347889998876554322111 2111112223 4566777764
Q ss_pred C-----CCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccc
Q psy10669 92 D-----PEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNA 122 (337)
Q Consensus 92 ~-----~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a 122 (337)
. .+ -+|.+++| ++|...++.+++++ +.+
T Consensus 89 ~~~~~~~~---~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 165 (403)
T TIGR01265 89 DLPGKLTA---DDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEAL 165 (403)
T ss_pred hcCCCCCH---HHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHH
Confidence 2 11 25777777 78877777888643 000
Q ss_pred ---cccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccc----c-c-cc----------eeeeec-c----
Q psy10669 123 ---RFDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHIS----G-L-IA----------GVKGVT-K---- 173 (337)
Q Consensus 123 ---~pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G-l-i~----------g~~~T~-~---- 173 (337)
+++++++...++ +...| +++|.++|+++|+++++|+++.- | - .. .++++. |
T Consensus 166 ~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 245 (403)
T TIGR01265 166 ADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVV 245 (403)
T ss_pred hCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCC
Confidence 156666653333 46665 56677889999999999999752 1 0 01 112222 2
Q ss_pred ---CCchhhh----h-----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-C
Q psy10669 174 ---TGEKILY----D-----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-G 240 (337)
Q Consensus 174 ---~Gg~i~~----~-----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G 240 (337)
+=|+++. + +.+.+...... ..+++.....++..++.+-....+++.++++.++.+.+.+.|... |
T Consensus 246 pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 323 (403)
T TIGR01265 246 PGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR--ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPG 323 (403)
T ss_pred CcceEEEEEEeCchhhhHHHHHHHHHHHhhh--hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1144432 1 22333322111 113444555555555543212344667788888989999999876 7
Q ss_pred CEEecCCCCCeEEEEEecCCC----cchHHHHHH-HhhcCceeccCc
Q psy10669 241 YHVVTGGTDVHLILIDLRKNK----LTGSKVELV-LEEIAIACNKNT 282 (337)
Q Consensus 241 ~~v~~~~t~~h~v~V~~~~~~----~~~~~~~~~-L~~~gI~v~~~~ 282 (337)
+++.. ...+.-+++.+.... .+..++.+. +++.||.+.+..
T Consensus 324 ~~~~~-p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~ 369 (403)
T TIGR01265 324 LVCPK-PEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGS 369 (403)
T ss_pred ceecC-CCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCcc
Confidence 76543 245566777775431 145566555 567899988643
No 201
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=98.47 E-value=2.1e-05 Score=76.01 Aligned_cols=152 Identities=10% Similarity=0.011 Sum_probs=93.2
Q ss_pred ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-------CCc
Q psy10669 124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGE 176 (337)
Q Consensus 124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg 176 (337)
+|+|++..-++ +...| .++|.++|+++|+++++|+++.-.... .+..|. | +.|
T Consensus 137 ~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG 216 (350)
T TIGR03537 137 TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSG 216 (350)
T ss_pred cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccce
Confidence 68777763333 46677 566777899999999999998643221 112221 2 237
Q ss_pred hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEE
Q psy10669 177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLIL 254 (337)
Q Consensus 177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~ 254 (337)
+++. ++.+.+.....+...+++ ....+++..++.+ ....++.++++.++.+.+.+.|.+.|+++... ..+-.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~-~g~~~~~ 292 (350)
T TIGR03537 217 FVAGDEKLISFLRKLRANFGVASP-DFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP-DATFYLW 292 (350)
T ss_pred eeecCHHHHHHHHHHHHhhccCCC-HHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeEEEEE
Confidence 7665 466655543223222232 2222333233321 12235667888899999999999999876542 2355567
Q ss_pred EEecCCCcchHHHHHHHhhcCceecc
Q psy10669 255 IDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 255 V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
+++.. +.+..++.+.|.+.||.+.+
T Consensus 293 ~~~~~-~~~~~~l~~~L~~~gv~v~~ 317 (350)
T TIGR03537 293 VKVPS-GIDAKDYALRLLENGIVVAP 317 (350)
T ss_pred EECCC-CCCHHHHHHHHHHCCEEEcC
Confidence 87764 34677888888888999985
No 202
>PLN02880 tyrosine decarboxylase
Probab=98.46 E-value=1.8e-05 Score=80.39 Aligned_cols=186 Identities=16% Similarity=0.094 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCC----cceeecCCCchhHHHHHHhh----C--------Cc-----------------
Q psy10669 73 FIDEIEIVAQQRSLKAFNLDPEQW----GCNVQPYSGSPANFAVCEKA----L--------PT----------------- 119 (337)
Q Consensus 73 ~~~~lE~~~~~~~a~lfg~~~~~~----~~~v~~~Sgt~AN~~v~~aL----l--------~~----------------- 119 (337)
...++|..+.+-++++||.+...| |--+..++||.||+..+.+- + ++
T Consensus 119 ~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa 198 (490)
T PLN02880 119 AATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKAC 198 (490)
T ss_pred ccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHH
Confidence 356899988999999999876422 22344455699986654332 0 11
Q ss_pred ------------------------------cc----c---cccEEEEc--CcccccccChHHHHHHhhhcCCeEEEeccc
Q psy10669 120 ------------------------------NN----A---RFDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMSH 160 (337)
Q Consensus 120 ------------------------------~~----a---~pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH 160 (337)
.+ + .|-+||.+ .+..+..-|+++|.++|+++|++++||+||
T Consensus 199 ~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~ 278 (490)
T PLN02880 199 QIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAY 278 (490)
T ss_pred HHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhh
Confidence 00 0 16666665 334678899999999999999999999999
Q ss_pred cccccc---------ee------eeeccC------C-chhhh-h---HHHHHhh---ccCCCC---CCCCcHH-------
Q psy10669 161 ISGLIA---------GV------KGVTKT------G-EKILY-D---YEEKINN---AVFPSL---QGGPHNH------- 201 (337)
Q Consensus 161 ~~Gli~---------g~------~~T~~~------G-g~i~~-~---l~~~i~~---~~~p~~---~g~~~~~------- 201 (337)
+.+++. |+ +...|| | |+++. + +...+.. .+++.. .++.+..
T Consensus 279 gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~ 358 (490)
T PLN02880 279 AGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLG 358 (490)
T ss_pred HHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCC
Confidence 998653 32 222232 3 44432 2 2111110 001000 0011110
Q ss_pred ---HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecC
Q psy10669 202 ---AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 202 ---~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~ 259 (337)
.-..+-..++.+-...+.++.++.++++++|++.|.+ .+++++.. .+..++.+.+.+
T Consensus 359 rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~-~~~~iv~Fr~~~ 419 (490)
T PLN02880 359 RRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP-RIFSLVCFRLVP 419 (490)
T ss_pred CcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEEeC
Confidence 0112222344444456677888888999999999977 58999863 344455554443
No 203
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.45 E-value=5.6e-05 Score=73.72 Aligned_cols=228 Identities=16% Similarity=0.169 Sum_probs=146.3
Q ss_pred ceeeeccCCCC--CHHHHHHHhhhh--hhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC-CCCCCCcceeecCCCc
Q psy10669 32 GIELIASENFT--SLAVLECLGSCL--QNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN-LDPEQWGCNVQPYSGS 106 (337)
Q Consensus 32 ~i~l~asen~~--~p~V~~a~~~~l--~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg-~~~~~~~~~v~~~Sgt 106 (337)
-+-|-+.||.. ||.+.+++...+ .++|.+. ...++. +.+++.+| .+. .+|....|+
T Consensus 24 ~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~----~a~a~~~~~~~~----~~V~~gnGs 84 (356)
T COG0079 24 IIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELR----AALAEYYGVVDP----ENVLVGNGS 84 (356)
T ss_pred ceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----------cHHHHH----HHHHHHhCCCCc----ceEEEcCCh
Confidence 46688899999 477888776543 3555432 123343 46778888 554 368878886
Q ss_pred -hhHHHHHHhhCCc-------------------------------c--c---------c-cccEEEEc-Ccc-cccccCh
Q psy10669 107 -PANFAVCEKALPT-------------------------------N--N---------A-RFDFLSSG-TTC-YSRCLDY 140 (337)
Q Consensus 107 -~AN~~v~~aLl~~-------------------------------~--~---------a-~pklII~~-~S~-~~~~~d~ 140 (337)
.....++.+++.+ . . . ++++|++. +.+ -+..++.
T Consensus 85 de~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~ 164 (356)
T COG0079 85 DELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPR 164 (356)
T ss_pred HHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCH
Confidence 4566666666553 0 0 0 25666665 433 3588888
Q ss_pred HHHHHHhhhc--CCeEEEeccc--ccc-----ccc-----eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCC
Q psy10669 141 ARFRQICDET--DSIMFADMSH--ISG-----LIA-----GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQG 196 (337)
Q Consensus 141 ~~l~eia~~~--ga~l~vD~AH--~~G-----li~-----g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g 196 (337)
++|.++++.. +++|+||+|= .++ ++. .+.-|+ | +=|+.+. ++.+.+++..-|+
T Consensus 165 ~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~--- 241 (356)
T COG0079 165 EELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPF--- 241 (356)
T ss_pred HHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCC---
Confidence 8888877654 8899999982 122 111 122233 2 2266554 6888888876665
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE-EecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH-VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~-v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
+.+.++.++..+++..- ...++..+++.+..++|.+.|...|+. +.. ++..-+++++.. +- ...+.+.|.+.|
T Consensus 242 ~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p--S~aNFvlv~~~~-~~-~~~l~~~L~~~g 315 (356)
T COG0079 242 NVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP--SQANFVLVRVPD-AE-AAALAEALLKKG 315 (356)
T ss_pred CCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--CCCcEEEEECCC-cc-HHHHHHHHHHCC
Confidence 23345555444444332 345677888888889999999998854 655 667788888776 32 557788888889
Q ss_pred ceeccCc-------ccchh
Q psy10669 276 IACNKNT-------GISLA 287 (337)
Q Consensus 276 I~v~~~~-------girig 287 (337)
|.++... .+||+
T Consensus 316 iivR~~~~~~~~~~~lRit 334 (356)
T COG0079 316 ILVRDCSSVGLLPGYLRIT 334 (356)
T ss_pred EEEEeCCCCCCCCCeEEEE
Confidence 9999764 57773
No 204
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.45 E-value=3.8e-06 Score=83.84 Aligned_cols=87 Identities=17% Similarity=0.116 Sum_probs=68.1
Q ss_pred cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------
Q psy10669 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------- 119 (337)
Q Consensus 71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------- 119 (337)
+.....+| +++++++|.++ ++.+.||+.|+..++.+++++
T Consensus 62 ~p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (427)
T PRK05994 62 NPTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRW 132 (427)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEE
Confidence 34556777 58889999986 688999999999999888764
Q ss_pred ---------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 120 ---------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 120 ---------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+.+ ++|+|++. .++ .+...|+++|.++|+++|+++++|++|..|+..
T Consensus 133 vd~~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~ 193 (427)
T PRK05994 133 ADADDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI 193 (427)
T ss_pred ECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC
Confidence 111 26888875 222 357889999999999999999999999977643
No 205
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.44 E-value=3.8e-06 Score=83.87 Aligned_cols=88 Identities=14% Similarity=0.144 Sum_probs=69.0
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| ++++++.|.++ ++.+.||+.|+..++.+++++
T Consensus 59 ~nPtv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~ 129 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVT 129 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEE
Confidence 677888999 58899999987 688999999999888888765
Q ss_pred -----------ccc---cccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 120 -----------NNA---RFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 120 -----------~~a---~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+.+ ++|+|++..-.++ ...|+++|.++|+++|+++++|.+....++.
T Consensus 130 ~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~ 192 (432)
T PRK06702 130 FFNPNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLC 192 (432)
T ss_pred EECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhC
Confidence 111 2788888522222 3459999999999999999999988766554
No 206
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=98.44 E-value=4e-05 Score=74.26 Aligned_cols=224 Identities=12% Similarity=0.090 Sum_probs=129.1
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~ 107 (337)
..+.|-..||.. ||.|++++...+.. . ..+|. .... ..|+.++++++.+. -+|.+++|+ +
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~-------~~~~----~lr~~ia~~~~~~~----~~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPD-------VEYR----HLHQALARHHQVPA----SWILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcC-------ccHH----HHHHHHHHHhCcCh----hhEEECCCHHH
Confidence 457788788875 88999998764332 1 11211 1122 23467788899876 368888884 5
Q ss_pred hHHHHHHhhCCc-----------------------------------------c-c-ccccEEEEc-Ccc-cccccC---
Q psy10669 108 ANFAVCEKALPT-----------------------------------------N-N-ARFDFLSSG-TTC-YSRCLD--- 139 (337)
Q Consensus 108 AN~~v~~aLl~~-----------------------------------------~-~-a~pklII~~-~S~-~~~~~d--- 139 (337)
+...++.++.+. + . .++|+|++. +.+ -+...+
T Consensus 84 ~l~~~~~~l~~g~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~ 163 (356)
T PRK08056 84 SIFAVVSGLKPRRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQL 163 (356)
T ss_pred HHHHHHHHhCCCCEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHH
Confidence 655555665221 0 0 126777765 433 247777
Q ss_pred hHHHHHHhhhcCCeEEEecccc------ccccc--------eeeeec-c-------CCchhhh---hHHHHHhhccCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI------SGLIA--------GVKGVT-K-------TGEKILY---DYEEKINNAVFPSL 194 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~------~Gli~--------g~~~T~-~-------~Gg~i~~---~l~~~i~~~~~p~~ 194 (337)
+++|.++|+++|+++++|++.. .+.+. .+..+. | +-|+++. ++.+.+.....+.
T Consensus 164 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~- 242 (356)
T PRK08056 164 LQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPW- 242 (356)
T ss_pred HHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC-
Confidence 5566788899999999999842 11111 122232 2 2355553 3545555432221
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
+.+....++...++ ....+ ++.++++.++.+.+.+.|.+. |+.+.. +++.-+++.+.. +..++.+.|.
T Consensus 243 --~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~l~ 312 (356)
T PRK08056 243 --SINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWP--GRANYLFLRCER---PDIDLQRALL 312 (356)
T ss_pred --chhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC--CCCcEEEEEcCC---ChHHHHHHHH
Confidence 22222222222222 12233 455677888888899999875 777654 445556777653 3456777887
Q ss_pred hcCceeccCc
Q psy10669 273 EIAIACNKNT 282 (337)
Q Consensus 273 ~~gI~v~~~~ 282 (337)
+.||.+..-.
T Consensus 313 ~~gI~v~~~~ 322 (356)
T PRK08056 313 TQRILIRSCA 322 (356)
T ss_pred HCCeEEEECC
Confidence 8899987533
No 207
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.44 E-value=2.6e-05 Score=77.41 Aligned_cols=210 Identities=13% Similarity=0.183 Sum_probs=139.2
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC----
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP---- 118 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~---- 118 (337)
|+..++||.. |--.|+|.....+|| +.++++||.++ .+..++|..+|..++..+++
T Consensus 56 S~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~g~ 115 (467)
T TIGR02617 56 TQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQ 115 (467)
T ss_pred CHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccccc
Confidence 6666666642 444577777788999 47789999996 57778999999888755433
Q ss_pred -----------c-------------------------------------------cc--c-c---c---cEEEEcCcc--
Q psy10669 119 -----------T-------------------------------------------NN--A-R---F---DFLSSGTTC-- 133 (337)
Q Consensus 119 -----------~-------------------------------------------~~--a-~---p---klII~~~S~-- 133 (337)
+ ++ + + + -.+.++-+.
T Consensus 116 e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~ 195 (467)
T TIGR02617 116 EKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNS 195 (467)
T ss_pred cccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEec
Confidence 1 00 0 0 0 122222111
Q ss_pred -cccccChHH---HHHHhhhcCCeEEEecccccc--c---------cc---------------eeeeec------cCCch
Q psy10669 134 -YSRCLDYAR---FRQICDETDSIMFADMSHISG--L---------IA---------------GVKGVT------KTGEK 177 (337)
Q Consensus 134 -~~~~~d~~~---l~eia~~~ga~l~vD~AH~~G--l---------i~---------------g~~~T~------~~Gg~ 177 (337)
=+.+.+.+. ++++|+++|..++.|.|=.+= . .+ +++... |.||+
T Consensus 196 ~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~ 275 (467)
T TIGR02617 196 AGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGL 275 (467)
T ss_pred CCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccce
Confidence 145556555 557899999999999976441 1 00 223333 34888
Q ss_pred hhh--h-HH---HHHhhc-----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC
Q psy10669 178 ILY--D-YE---EKINNA-----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG 246 (337)
Q Consensus 178 i~~--~-l~---~~i~~~-----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~ 246 (337)
++. + +. ++.+.. -||. +|+....-+.|+|+++.|... .+|.++=+...++|.+.|.+.|+.++.
T Consensus 276 Lag~d~~~~~l~~~~~~~~i~~EGf~t-YGGlagrd~ea~a~Gl~e~~~---~~yl~~ri~qv~yl~~~L~~~Gvpi~~- 350 (467)
T TIGR02617 276 LCFKDDSFFDVYTECRTLCVVQEGFPT-YGGLEGGAMERLAVGLYDGMN---LDWLAYRINQVQYLVNGLEEIGVVCQQ- 350 (467)
T ss_pred EEecchhHHHHHHHHHhhcccccCCcC-cCchhHHHHHHHHhhhhhccc---HHHHHHHHHHHHHHHHHHHhCCCcEEe-
Confidence 875 2 22 333321 2332 788899999999999999865 467777788899999999999999986
Q ss_pred CCCCeEEEEEecC-------CCcchHHHHHHHhh-cCcee
Q psy10669 247 GTDVHLILIDLRK-------NKLTGSKVELVLEE-IAIAC 278 (337)
Q Consensus 247 ~t~~h~v~V~~~~-------~~~~~~~~~~~L~~-~gI~v 278 (337)
+-.|-+.||.+. ..+.+..+...|.. .||..
T Consensus 351 -~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~ 389 (467)
T TIGR02617 351 -AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRA 389 (467)
T ss_pred -cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcce
Confidence 889999898543 35566666666663 67763
No 208
>PRK05942 aspartate aminotransferase; Provisional
Probab=98.44 E-value=0.00012 Score=72.03 Aligned_cols=153 Identities=11% Similarity=0.142 Sum_probs=89.0
Q ss_pred ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccc---------cccc-------ee-eeec-c----CC-
Q psy10669 124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHIS---------GLIA-------GV-KGVT-K----TG- 175 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~---------Gli~-------g~-~~T~-~----~G- 175 (337)
+|+|++. +++ -+...+ +++|.++|+++|+++++|+++.- .+.. .+ .++. | .|
T Consensus 171 ~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl 250 (394)
T PRK05942 171 AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW 250 (394)
T ss_pred ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhh
Confidence 6888876 433 246777 44566788999999999999642 1111 11 2222 2 12
Q ss_pred --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
|+++. ++.+.+..... .+..+...+...++..++... +...++.++++.++.+++.+.|.+.|+.+... ..+-
T Consensus 251 RiG~i~~~~~l~~~l~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~~ 327 (394)
T PRK05942 251 RVGFVVGNRHIIQGLRTLKT-NLDYGIFSALQKAAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT-KATM 327 (394)
T ss_pred heeeeecCHHHHHHHHHHHh-hcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Ceee
Confidence 66655 56666654322 111123334444444444322 22335667778888888999999889887642 2232
Q ss_pred EEEEEecCCCcchHHHH-HHHhhcCceecc
Q psy10669 252 LILIDLRKNKLTGSKVE-LVLEEIAIACNK 280 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~-~~L~~~gI~v~~ 280 (337)
.+++.+.. +.+..++. +.|++.||.+.+
T Consensus 328 f~~~~~~~-~~~~~~~~~~~l~~~gV~v~~ 356 (394)
T PRK05942 328 YLWVPCPV-GMGSTDFALNVLQKTGVVVTP 356 (394)
T ss_pred EEEEECCC-CCCHHHHHHHHHHHCCEEEeC
Confidence 45666653 33445444 466778999865
No 209
>PRK07324 transaminase; Validated
Probab=98.43 E-value=1.9e-05 Score=77.21 Aligned_cols=196 Identities=14% Similarity=0.143 Sum_probs=111.8
Q ss_pred HHHHhhcC-CCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669 83 QRSLKAFN-LDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------------------- 119 (337)
Q Consensus 83 ~~~a~lfg-~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------------------- 119 (337)
+.++++++ .++ .+|.+++| ++|+..++.+++++
T Consensus 69 ~~ia~~~~~~~~----~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~ 144 (373)
T PRK07324 69 EAVASLYQNVKP----ENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLD 144 (373)
T ss_pred HHHHHHhcCCCh----hhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence 56677775 444 25777777 68888888998754
Q ss_pred cc-----ccccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc-------------e-eeeec-c-
Q psy10669 120 NN-----ARFDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA-------------G-VKGVT-K- 173 (337)
Q Consensus 120 ~~-----a~pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g-~~~T~-~- 173 (337)
.+ .++|+|++..-++ +...| +++|.++|+++|+++++|+++. ++.- + ..+|. |
T Consensus 145 ~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~s~~~~~~~~I~~~s~SK~ 223 (373)
T PRK07324 145 ELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR-PLDEDGSTPSIADLYEKGISTNSMSKT 223 (373)
T ss_pred HHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCCChhhccCCEEEEecchhh
Confidence 00 0268888763333 46677 6667788999999999999863 2211 1 12222 2
Q ss_pred ---CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEe
Q psy10669 174 ---TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVV 244 (337)
Q Consensus 174 ---~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~ 244 (337)
.| |++++ ++.+.+.........+.+.+...++ ..++... +...+..++.+.++.+.+.+.|.+. ++...
T Consensus 224 ~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a-~~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 301 (373)
T PRK07324 224 YSLPGIRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLA-SLALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYV 301 (373)
T ss_pred cCCccceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHH-HHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 13 66655 4666665442211122222223322 2333221 1223455667777888888888775 66655
Q ss_pred cCCCCCeEEEEEecCCCcchHHHHHH-HhhcCceeccCc------ccchh
Q psy10669 245 TGGTDVHLILIDLRKNKLTGSKVELV-LEEIAIACNKNT------GISLA 287 (337)
Q Consensus 245 ~~~t~~h~v~V~~~~~~~~~~~~~~~-L~~~gI~v~~~~------girig 287 (337)
.+ ...-..++.+.. +.+..++.+. |+++||.+.+-. .|||+
T Consensus 302 ~p-~gg~~~~i~~~~-~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis 349 (373)
T PRK07324 302 KP-KAVSTSFVKLDV-DMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG 349 (373)
T ss_pred CC-CceEEEEEEeCC-CCCHHHHHHHHHHhcCEEEECccccCCCCeEEEE
Confidence 42 111223455543 2355666555 567899988743 56665
No 210
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.43 E-value=4.1e-06 Score=81.84 Aligned_cols=185 Identities=14% Similarity=0.131 Sum_probs=117.5
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------c-------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------N------- 120 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------~------- 120 (337)
++....++| +++++++|.++ .+.++||+.|+..++. ++++ .
T Consensus 52 ~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~ 121 (364)
T PRK07269 52 KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT 121 (364)
T ss_pred CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEE
Confidence 556678888 57889999886 6888899999887774 4443 0
Q ss_pred ---------cc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeecc----
Q psy10669 121 ---------NA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTK---- 173 (337)
Q Consensus 121 ---------~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~---- 173 (337)
.+ ++|+|++. +++ .+...|+++|.++|+++|+++++|.++..++.. .+.|.+|
T Consensus 122 ~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g 201 (364)
T PRK07269 122 YANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSG 201 (364)
T ss_pred ecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccC
Confidence 01 26888765 544 357789999999999999999999999887654 1233332
Q ss_pred ----CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EEe
Q psy10669 174 ----TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HVV 244 (337)
Q Consensus 174 ----~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v~ 244 (337)
.||.|++ ++.+++... + ...|....+.-|+++. ..+ .....+.++-.+|++++++.|.+. ++ +|.
T Consensus 202 ~~d~~gG~v~~~~~~l~~~~~~~-~-~~~G~~~s~~~a~l~~--~~L--~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ 275 (364)
T PRK07269 202 HNDVLAGVVVTNDLELYEKLFYN-L-NTTGAVLSPFDSYLLM--RGL--KTLSLRMERSTANAQEVVAFLKKSPAVKEVL 275 (364)
T ss_pred CCcccceEEEeCcHHHHHHHHHH-H-HHhCCCCCHHHHHHHH--cCC--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEe
Confidence 2677665 355555422 1 1233444444444433 233 246788899999999999999984 43 344
Q ss_pred cCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 245 TGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 245 ~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
..+ -.-++.+.+. + ...+.+.++...
T Consensus 276 ypg-~gg~~sf~~~--~--~~~~~~f~~~l~ 301 (364)
T PRK07269 276 YTG-KGGMISFKVA--D--ETRIPHILNSLK 301 (364)
T ss_pred CCC-cCcEEEEEEC--C--HHHHHHHHHhCC
Confidence 322 2334455543 2 344445555433
No 211
>PRK07908 hypothetical protein; Provisional
Probab=98.43 E-value=7.6e-05 Score=72.00 Aligned_cols=229 Identities=15% Similarity=0.098 Sum_probs=136.7
Q ss_pred HhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 26 KHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 26 ~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
..+..+.+.|-..+|- .++.+++++...+.. + .+|+.. ....+ .|+.+++++|.+. .+|.++
T Consensus 18 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~Y~~~------~g~~~----lr~aia~~~~~~~----~~I~it 81 (349)
T PRK07908 18 QDAGPGLLDFAVNVRHDTPPEWLRERLAARLGD-L-AAYPST------EDERR----ARAAVAARHGRTP----DEVLLL 81 (349)
T ss_pred ccCCCCeEEecCCCCCCCCCHHHHHHHHHHhhH-h-hcCCCc------cchHH----HHHHHHHHhCcCh----hhEEEC
Confidence 3444567777777773 388899998765432 1 122221 11222 3467788889876 368898
Q ss_pred CCc-hhHHHHHHhhCCc-----------------------------c--------cc-cccEEEEc-Ccc-cccccChHH
Q psy10669 104 SGS-PANFAVCEKALPT-----------------------------N--------NA-RFDFLSSG-TTC-YSRCLDYAR 142 (337)
Q Consensus 104 Sgt-~AN~~v~~aLl~~-----------------------------~--------~a-~pklII~~-~S~-~~~~~d~~~ 142 (337)
+|+ ++...++. +-+. . +. ++++|++. +++ .+...+.++
T Consensus 82 ~Ga~~al~~~~~-l~~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~~ 160 (349)
T PRK07908 82 AGAAEGFALLAR-LRPRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVLHPAEQ 160 (349)
T ss_pred CCHHHHHHHHHh-cCCCeEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCCcCHHH
Confidence 985 66555544 3211 0 01 25777664 443 358888899
Q ss_pred HHHHhhhcCCeEEEeccccc---cc----cc------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCc
Q psy10669 143 FRQICDETDSIMFADMSHIS---GL----IA------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPH 199 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~---Gl----i~------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~ 199 (337)
|.++|++ +.++++|++|.- |- .. .+..|. | +-|+++. ++.+.+.+...+. +..
T Consensus 161 l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~---~~~ 236 (349)
T PRK07908 161 LLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW---PVG 236 (349)
T ss_pred HHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCC---Ccc
Confidence 9999975 789999999841 21 10 112222 2 2366665 5666666543322 233
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
....+++...+..-.....++.++++.++.+++.+.|.+.|+++... +....+++.+.+ ..++.+.|.+.||.+.
T Consensus 237 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~~~~~~~~~----~~~~~~~l~~~gI~v~ 311 (349)
T PRK07908 237 TLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP-AAAPFVLVRVPD----AELLRKRLRERGIAVR 311 (349)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCceEEEEECCc----HHHHHHHHHhCCEEEE
Confidence 34444433333211012345667788888888999998888887642 446666777653 4678888888999987
Q ss_pred c
Q psy10669 280 K 280 (337)
Q Consensus 280 ~ 280 (337)
+
T Consensus 312 ~ 312 (349)
T PRK07908 312 R 312 (349)
T ss_pred E
Confidence 5
No 212
>PRK07337 aminotransferase; Validated
Probab=98.43 E-value=6.5e-05 Score=73.55 Aligned_cols=242 Identities=11% Similarity=0.052 Sum_probs=129.2
Q ss_pred cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669 29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG- 105 (337)
Q Consensus 29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg- 105 (337)
+...+.|-..++-. +|.+.+++...+.+. ..+ |....-..++.....+.+.+.+|.+-.. -+|.+++|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~ 99 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQ------YTSALGLAPLREAIAAWYARRFGLDVAP--ERIVVTAGA 99 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCh--HhEEEecCc
Confidence 34556666666543 778888887654321 111 2222223334322223333444542110 25777777
Q ss_pred chhHHHHHHhhCCc-----------------------------------------cc--c---cccEEEEc-Ccc-cccc
Q psy10669 106 SPANFAVCEKALPT-----------------------------------------NN--A---RFDFLSSG-TTC-YSRC 137 (337)
Q Consensus 106 t~AN~~v~~aLl~~-----------------------------------------~~--a---~pklII~~-~S~-~~~~ 137 (337)
++|...++.+++++ ++ . ++++|++. +++ .+..
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~ 179 (388)
T PRK07337 100 SAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTS 179 (388)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcC
Confidence 56766666777653 00 0 24555553 433 2354
Q ss_pred cC---hHHHHHHhhhcCCeEEEeccccc-cc----cc--------eeeeec-c-------CCchhhh--hHHHHHhhccC
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHIS-GL----IA--------GVKGVT-K-------TGEKILY--DYEEKINNAVF 191 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~-Gl----i~--------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~ 191 (337)
.+ +++|.++|+++|+++++|++... .. .. ....+. | +-|+++. ++.+.+.....
T Consensus 180 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~ 259 (388)
T PRK07337 180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQ 259 (388)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHH
Confidence 54 55667888999999999988541 10 00 112222 2 2366655 46565554433
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC----CcchHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN----KLTGSKV 267 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~----~~~~~~~ 267 (337)
+...+.+.+ ...++..++..-....+++.++++.++.+++.+.|.+.|+.+.........++++++.. ..+..++
T Consensus 260 ~~~~~~s~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~ 338 (388)
T PRK07337 260 NLFICASAL-AQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAAL 338 (388)
T ss_pred HhccCCChH-HHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHH
Confidence 322223333 33333333321101234566778888888899999998876532224566788888642 2355565
Q ss_pred HH-HHhhcCceecc
Q psy10669 268 EL-VLEEIAIACNK 280 (337)
Q Consensus 268 ~~-~L~~~gI~v~~ 280 (337)
.. .+++.||.+.+
T Consensus 339 ~~~ll~~~gv~v~p 352 (388)
T PRK07337 339 TQAMLHDAGVVLVP 352 (388)
T ss_pred HHHHHHhCCEEEeC
Confidence 54 46778999875
No 213
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.42 E-value=5.1e-06 Score=84.60 Aligned_cols=191 Identities=10% Similarity=0.139 Sum_probs=106.6
Q ss_pred EEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEeccc-cccccc--------ee----eeec--------cCCch
Q psy10669 126 FLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSH-ISGLIA--------GV----KGVT--------KTGEK 177 (337)
Q Consensus 126 lII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH-~~Gli~--------g~----~~T~--------~~Gg~ 177 (337)
.||+. .++++ ..+ +++|++||+++|++||+|+.| +.|-.+ |+ ...+ |-|++
T Consensus 263 AvI~E-Pv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv 341 (504)
T PLN02760 263 AFIAE-PVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAV 341 (504)
T ss_pred EEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceE
Confidence 56665 46654 444 677999999999999999999 577666 11 1111 33443
Q ss_pred hhh-hHHHHHhhc-------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-C
Q psy10669 178 ILY-DYEEKINNA-------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-G 247 (337)
Q Consensus 178 i~~-~l~~~i~~~-------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~ 247 (337)
+.. ++.+.+.+. ..++++++ |+...|+...++..+.+ ++..+++.++.++|.+.|++. .+.++.. -
T Consensus 342 ~~~~~i~d~~~~~~~~~~~~~h~~T~~g-nPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vr 417 (504)
T PLN02760 342 LVSPEISDVIHSQSNKLGSFAHGFTYSG-HPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIR 417 (504)
T ss_pred eecHHHHhhhhcccccccCcccCCCCCC-CHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEE
Confidence 333 565655421 23445554 66666666666666643 267899999999999988773 1222210 0
Q ss_pred CCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc-ccchhhhhHhhhCCCHHHHHHHHhhCCCcHHHHH
Q psy10669 248 TDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT-GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVA 316 (337)
Q Consensus 248 t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~-girig~~~~t~~G~~~~~~~~~~~~~~~~~~~~~ 316 (337)
...-++-|.+.+..- -...+.+.|.+.||.+.... .+||..+.. .+.+|+.+.+.. -++.+.
T Consensus 418 G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~----it~eeid~~~~~---l~~al~ 490 (504)
T PLN02760 418 GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLI----ITPEEVDELISI---YGKALK 490 (504)
T ss_pred eCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCC----CCHHHHHHHHHH---HHHHHH
Confidence 111233444432210 03345566777899987543 567654432 223333322110 012356
Q ss_pred HHHHHHHHHHhc
Q psy10669 317 ALKKEIEDYSNQ 328 (337)
Q Consensus 317 ~lr~~V~~~~~~ 328 (337)
++.++|.++-++
T Consensus 491 ~~~~~~~~~~~~ 502 (504)
T PLN02760 491 ATEERVAELKSQ 502 (504)
T ss_pred HHHHHHHHhhhc
Confidence 677777777543
No 214
>PRK08068 transaminase; Reviewed
Probab=98.42 E-value=0.00015 Score=71.00 Aligned_cols=153 Identities=12% Similarity=0.026 Sum_probs=92.7
Q ss_pred ccEEEEc-Ccc-cccccChHHHH---HHhhhcCCeEEEeccccc----c--c---cc--------eeeeec-c----CC-
Q psy10669 124 FDFLSSG-TTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G--L---IA--------GVKGVT-K----TG- 175 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G--l---i~--------g~~~T~-~----~G- 175 (337)
+++|++. +.+ -+...+.+++. ++|+++++++++|+++.- | . +. .++.|. | .|
T Consensus 168 ~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl 247 (389)
T PRK08068 168 AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW 247 (389)
T ss_pred ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc
Confidence 6777776 433 24777876555 578899999999999831 1 0 11 112222 2 13
Q ss_pred --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
|+++. ++.+.+.....+...+.+.+.. .+...++.+- ....+..++++.++.+.+.+.|.+.|+++.. ...+.
T Consensus 248 RiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~-~~g~~ 324 (389)
T PRK08068 248 RVAFAVGNESVIEAINLLQDHLFVSLFGAIQ-DAAIEALLSD-QSCVAELVARYESRRNAFISACREIGWEVDA-PKGSF 324 (389)
T ss_pred eeEeEecCHHHHHHHHHHHhhccCCCChHHH-HHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeeE
Confidence 66655 5666666543333233332222 2333333221 1234677888889999999999999987653 23345
Q ss_pred EEEEEecCCCcchHHHHHHHh-hcCceecc
Q psy10669 252 LILIDLRKNKLTGSKVELVLE-EIAIACNK 280 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~-~~gI~v~~ 280 (337)
.+++.+.. +.+..++.+.|. ++||.+.+
T Consensus 325 ~~~v~~~~-~~~~~~~~~~l~~~~gi~v~p 353 (389)
T PRK08068 325 FAWMPVPK-GYTSEQFADLLLEKAHVAVAP 353 (389)
T ss_pred EEEEECCC-CCCHHHHHHHHHHhCCEEEec
Confidence 56777754 346777877776 47999976
No 215
>PRK05967 cystathionine beta-lyase; Provisional
Probab=98.41 E-value=4.2e-06 Score=82.61 Aligned_cols=155 Identities=11% Similarity=-0.018 Sum_probs=104.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.|| ++++.+-+.+. ++.++||+.|..+++.+++++
T Consensus 62 gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~ 132 (395)
T PRK05967 62 GTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVE 132 (395)
T ss_pred CChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEE
Confidence 566667787 46778877764 689999999988888998765
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~-- 173 (337)
+.+ ++|+|+++ +++ .....|+++|.++|+++|++++||.++..++.- | +.|..|
T Consensus 133 ~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~ 212 (395)
T PRK05967 133 YYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYP 212 (395)
T ss_pred EeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEeccccc
Confidence 001 27888887 343 358889999999999999999999999887644 2 334433
Q ss_pred ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||.+.. ++.+++..... . .|+...|.=|.+ .+..+ ....-++++..+||..+++.|.+.
T Consensus 213 ~Gh~d~~~G~v~~~~~~~~~l~~~~~-~-~G~~~~p~da~l--~~rgl--~Tl~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 213 SGHSDILLGTVSANEKCWPQLLEAHG-T-LGLCAGPDDTYQ--ILRGL--RTMGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred CCCCCeeEEEEEcCHHHHHHHHHHHH-H-cCCCCCHHHHHH--HHcCc--ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 1454443 33344432211 1 344433333332 22233 356788999999999999999983
No 216
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.39 E-value=3.2e-05 Score=71.47 Aligned_cols=253 Identities=14% Similarity=0.158 Sum_probs=157.2
Q ss_pred hhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCC---CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 27 HRQINGIELIASENFTSLAVLECLGSCLQNKYSEGL---PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 27 ~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~---~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
.|..-.++=|----.++++.++|+.. +..-|+..- .|+=----+..+...- +.+++|.|++ .++++
T Consensus 14 ~r~~iNv~PiQrGGiLt~eArkal~E-~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D------~~R~t 82 (382)
T COG1103 14 TRGFINVNPIQRGGILTEEARKALLE-WGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMD------EVRVT 82 (382)
T ss_pred hcCccccChhhccCcCCHHHHHHHHH-hcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCc------eeeec
Confidence 33333344445566789999999974 355454321 1221111223343322 2478999998 48999
Q ss_pred CCc-hhHHHHHHhhCCc------------------------------------------------c--cc--c-ccEEEE
Q psy10669 104 SGS-PANFAVCEKALPT------------------------------------------------N--NA--R-FDFLSS 129 (337)
Q Consensus 104 Sgt-~AN~~v~~aLl~~------------------------------------------------~--~a--~-pklII~ 129 (337)
.|. .|-++|..+|+++ + .. + |.+.++
T Consensus 83 ~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lall 162 (382)
T COG1103 83 AGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALL 162 (382)
T ss_pred ccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEE
Confidence 995 8999999999874 1 11 2 677777
Q ss_pred c--CcccccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeeeccC-----C--chh-hh-hHHHHHhh-
Q psy10669 130 G--TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGVTKT-----G--EKI-LY-DYEEKINN- 188 (337)
Q Consensus 130 ~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T~~~-----G--g~i-~~-~l~~~i~~- 188 (337)
+ .+.|+..-|.+.+.+||+++|.+|++..|-+.|-+. | +++++|| | |++ +. ++++.+-+
T Consensus 163 Th~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~ 242 (382)
T COG1103 163 THVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRR 242 (382)
T ss_pred eccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhh
Confidence 7 567999999999999999999999999999999888 1 3455543 1 333 23 45553321
Q ss_pred c--cCCCC---------CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCeEEEEE
Q psy10669 189 A--VFPSL---------QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVHLILID 256 (337)
Q Consensus 189 ~--~~p~~---------~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h~v~V~ 256 (337)
+ -||-- .|.|....||+.-.-...+ ...++.++++++|.+.|.+.| +.-.+....+|-+ +.
T Consensus 243 Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV------krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdL-m~ 315 (382)
T COG1103 243 SGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV------KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDL-MK 315 (382)
T ss_pred cccccccceeeeecccccCchHHHHHhcCHHHHHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccce-ee
Confidence 1 13321 3666666666655544433 346778999999999999975 8777655667743 44
Q ss_pred ecCCCcchHHHHHHHhhcCceeccCc------ccchhhhh---HhhhCCCHH
Q psy10669 257 LRKNKLTGSKVELVLEEIAIACNKNT------GISLAAEI---QAISGPKLV 299 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~~gI~v~~~~------girig~~~---~t~~G~~~~ 299 (337)
+.... -.++++.-.+.|.+...-. |||=|+.- ....|++-+
T Consensus 316 Fetp~--f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~svyGl~~E 365 (382)
T COG1103 316 FETPV--FHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSVYGLSWE 365 (382)
T ss_pred ecCch--HHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEeecCCHH
Confidence 43332 3455555444566654322 77766431 223565533
No 217
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.39 E-value=0.00018 Score=70.47 Aligned_cols=263 Identities=9% Similarity=-0.010 Sum_probs=137.7
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHH
Q psy10669 4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVA 81 (337)
Q Consensus 4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~ 81 (337)
++++.+.+....+.+..-+.+........++|-..++-. ++.+.+++...+... ...|.-..-..++....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~i 75 (384)
T PRK06348 3 NKFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKG-------HTRYTDSGGDVELIEEI 75 (384)
T ss_pred chHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHH
Confidence 456655555555555444443332233457766666554 466666554332211 01122222122333222
Q ss_pred HHHHHhhcC--CCCCCCcceeecCCC-chhHHHHHHhhCCc---------------------------------------
Q psy10669 82 QQRSLKAFN--LDPEQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------------- 119 (337)
Q Consensus 82 ~~~~a~lfg--~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------- 119 (337)
.+.+.+-+| .+. -+|.+++| ++|...++.+++++
T Consensus 76 a~~~~~~~~~~~~~----~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 151 (384)
T PRK06348 76 IKYYSKNYDLSFKR----NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQIN 151 (384)
T ss_pred HHHHHHHhCCCCCh----hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCC
Confidence 223333233 343 25778888 56777777887654
Q ss_pred --cc-----ccccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeee
Q psy10669 120 --NN-----ARFDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGV 171 (337)
Q Consensus 120 --~~-----a~pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T 171 (337)
.+ .++|+|++. +.+ .+...+ .++|.++|+++|+++++|+++.--... .+..|
T Consensus 152 ~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S 231 (384)
T PRK06348 152 VKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGS 231 (384)
T ss_pred HHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEec
Confidence 00 125766664 322 235555 445667789999999999997531111 11223
Q ss_pred c-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-C
Q psy10669 172 T-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-G 240 (337)
Q Consensus 172 ~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G 240 (337)
. | +-|+++. ++.+.+......... +++.....+++.++.+. +...++.++...++.+++.+.|.+. |
T Consensus 232 fSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~ 309 (384)
T PRK06348 232 FSKDFAMTGWRIGYVIAPDYIIETAKIINEGICF-SAPTISQRAAIYALKHR-DTIVPLIKEEFQKRLEYAYKRIESIPN 309 (384)
T ss_pred chhccCCccccceeeecCHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2 2 2366655 466655543221112 23334444444444332 1123456666777788888888874 6
Q ss_pred CEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCceecc
Q psy10669 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 241 ~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~ 280 (337)
+.+.. ...+-.+++.+...+.+..++...| +++||.+.+
T Consensus 310 ~~~~~-p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~p 349 (384)
T PRK06348 310 LSLHP-PKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIP 349 (384)
T ss_pred ceecc-CCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcC
Confidence 66543 1234456777765455677777665 568999885
No 218
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=98.38 E-value=1.2e-05 Score=78.56 Aligned_cols=173 Identities=16% Similarity=0.083 Sum_probs=104.7
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|+++ ++.+.||+.|...++ +++++
T Consensus 50 ~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~ 119 (366)
T PRK08247 50 GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFV 119 (366)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEE
Confidence 445667888 58899999986 688999998887765 56543
Q ss_pred ----------ccc---cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~-- 173 (337)
+.+ ++|+|++. +++- ....|+++|.++|+++|+++++|+++..++.. + + .|..|
T Consensus 120 ~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~ 199 (366)
T PRK08247 120 YVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYL 199 (366)
T ss_pred EECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceec
Confidence 111 26888774 4432 35578888999999999999999999776644 1 1 22222
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHV 243 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v 243 (337)
.||+++. ++.+.+..... . .|....+..+.++. ..+ .......++..+|++.+++.|.+. ++..
T Consensus 200 ~g~~d~~~G~iv~~~~~l~~~~~~~~~-~-~g~~~s~~~a~l~~--~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~ 273 (366)
T PRK08247 200 GGHNDVLAGLVVAKGQELCERLAYYQN-A-AGAVLSPFDSWLLI--RGM--KTLALRMRQHEENAKAIAAFLNEQPGVTD 273 (366)
T ss_pred cCCCceeeeEEecChHHHHHHHHHHHH-h-cCCCCChHHHHHHH--hcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence 3566654 35444432211 1 11111222222222 122 134566777899999999999984 7764
Q ss_pred ecCCCCCeEEEEEec
Q psy10669 244 VTGGTDVHLILIDLR 258 (337)
Q Consensus 244 ~~~~t~~h~v~V~~~ 258 (337)
+......-++.+.+.
T Consensus 274 v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 274 VLYPGRGGMLSFRLQ 288 (366)
T ss_pred EecCCcCcEEEEEEC
Confidence 321123445555553
No 219
>PRK07671 cystathionine beta-lyase; Provisional
Probab=98.36 E-value=8.3e-06 Score=80.07 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=99.2
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|.++ ++.+.||+.|+.+++ +++++
T Consensus 48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~ 117 (377)
T PRK07671 48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHT 117 (377)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEE
Confidence 455567787 58899999886 688999988876665 45443
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~-- 173 (337)
+.+ ++|+|++. +++ .+...|+++|.++|+++|+++++|+++..+... + + .|..|
T Consensus 118 ~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l 197 (377)
T PRK07671 118 FVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYL 197 (377)
T ss_pred EECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccc
Confidence 101 26777765 433 357889999999999999999999999876544 1 2 22222
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||+++. ++.+++.... . ..|+...+.-+.++. ..+ .....++++..+|++.|++.|.+.
T Consensus 198 ~G~~~~~~G~~v~~~~~l~~~~~~~~-~-~~g~~~~~~~a~l~~--~~l--~tl~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 198 GGHSDVVAGLVVVNSPELAEDLHFVQ-N-STGGILGPQDSWLLL--RGL--KTLGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred cCCccceeEEEEeCcHHHHHHHHHHH-H-hhcCCCCHHHHHHHH--cCc--ChHHHHHHHHHHHHHHHHHHHHcC
Confidence 2465543 3555444321 1 123333343333322 222 235568889999999999999973
No 220
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=98.35 E-value=4.5e-05 Score=73.88 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=126.9
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN 109 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN 109 (337)
..+.|-+.||..+|...... ...++|.+ .+ ..++ ++.+++.+|.+. -+|.+++| +++.
T Consensus 29 ~~~~l~~Nenp~~~~~~~~~--~~~~~Yp~----~~-------~~~l----~~~~a~~~g~~~----~~I~~~~Gs~e~i 87 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLTQ--QTLNRYPE----CQ-------PKAV----IENYAAYAGVKP----EQVLVSRGADEGI 87 (351)
T ss_pred CceEecCCCCCCCCChhhcc--cccccCCC----CC-------hHHH----HHHHHHHhCCCH----HHEEEcCCHHHHH
Confidence 34778888888744322111 11234421 11 1233 346778899886 36889898 4676
Q ss_pred HHHHHhhCCc----------------------------------------cc----ccccEEEEc-Ccc-cccccChHHH
Q psy10669 110 FAVCEKALPT----------------------------------------NN----ARFDFLSSG-TTC-YSRCLDYARF 143 (337)
Q Consensus 110 ~~v~~aLl~~----------------------------------------~~----a~pklII~~-~S~-~~~~~d~~~l 143 (337)
..++.+++++ .+ .++|+|++. +.+ -+...+.+++
T Consensus 88 ~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l 167 (351)
T PRK01688 88 ELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDL 167 (351)
T ss_pred HHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHH
Confidence 6666777532 00 125766665 433 2588888888
Q ss_pred HHHhhhc--CCeEEEecccccc--------ccc-----eeeeeccC-----C---chhhh--hHHHHHhhccCCCCCCCC
Q psy10669 144 RQICDET--DSIMFADMSHISG--------LIA-----GVKGVTKT-----G---EKILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 144 ~eia~~~--ga~l~vD~AH~~G--------li~-----g~~~T~~~-----G---g~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
.+|++.. +.++++|+|+.-= ++. .+..|..| | |++++ ++.+.+++...|.- .
T Consensus 168 ~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~~---v 244 (351)
T PRK01688 168 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYP---L 244 (351)
T ss_pred HHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCCC---C
Confidence 8776532 6899999997421 111 12233322 2 56655 57777776544432 2
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
+.+..++...++..-.....++.++++.++.+++.+.|.+. |+. +.. ++...+++.+. +..++.+.|.+.||
T Consensus 245 ~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p--s~~nfi~~~~~----~~~~l~~~L~~~gi 318 (351)
T PRK01688 245 STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFD--SETNYILARFT----ASSAVFKSLWDQGI 318 (351)
T ss_pred CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC--CCCcEEEEEcC----CHHHHHHHHHHCCe
Confidence 22222222223321101234566778888888999999886 664 433 45556777764 35677888888899
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+..
T Consensus 319 ~vr~ 322 (351)
T PRK01688 319 ILRD 322 (351)
T ss_pred EEEE
Confidence 9875
No 221
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=98.35 E-value=6.5e-06 Score=81.87 Aligned_cols=87 Identities=14% Similarity=0.023 Sum_probs=66.9
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|.++ .+.++||+.|+..++.+++++
T Consensus 55 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~ 125 (418)
T TIGR01326 55 MNPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVR 125 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEE
Confidence 445566777 58899999875 688999999999888888654
Q ss_pred ----------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669 120 ----------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLI 165 (337)
Q Consensus 120 ----------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli 165 (337)
+.+ ++++|++....+ +...|+++|.++|+++|+++++|++|..|+.
T Consensus 126 ~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~ 186 (418)
T TIGR01326 126 FVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL 186 (418)
T ss_pred EECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc
Confidence 001 267887763233 3667999999999999999999999998754
No 222
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.34 E-value=5.8e-06 Score=81.41 Aligned_cols=192 Identities=15% Similarity=0.118 Sum_probs=119.7
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| ++++++-|++. ++.+.||..|..+++.+++++
T Consensus 53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~ 123 (386)
T PF01053_consen 53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVT 123 (386)
T ss_dssp C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEE
T ss_pred ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEE
Confidence 667778898 57899999975 788999999998888999875
Q ss_pred --------cc--c---cccEEEEc-Cccc-ccccChHHHHHHhhhcC-CeEEEeccccccccc-----e----eeeecc-
Q psy10669 120 --------NN--A---RFDFLSSG-TTCY-SRCLDYARFRQICDETD-SIMFADMSHISGLIA-----G----VKGVTK- 173 (337)
Q Consensus 120 --------~~--a---~pklII~~-~S~~-~~~~d~~~l~eia~~~g-a~l~vD~AH~~Gli~-----g----~~~T~~- 173 (337)
++ + ++++|++. +|+- ....|++++.++|+++| ++++||.+...++.- | +.|.+|
T Consensus 124 ~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKy 203 (386)
T PF01053_consen 124 FVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKY 203 (386)
T ss_dssp EESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTT
T ss_pred EeCchhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeecccc
Confidence 11 1 27889887 4443 38899999999999999 999999999887654 2 334433
Q ss_pred -------CCchhhh----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC
Q psy10669 174 -------TGEKILY----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY 241 (337)
Q Consensus 174 -------~Gg~i~~----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~ 241 (337)
.||.++. ++.+++.... ...|+...|.-|.+.. +-+ ..+..++++..+||+++++.|.+. .+
T Consensus 204 l~Ghsdv~~G~vv~~~~~~~~~~l~~~~--~~~G~~~~p~da~ll~--rgl--~Tl~~R~~~~~~nA~~lA~~L~~hp~V 277 (386)
T PF01053_consen 204 LSGHSDVMGGAVVVNGSSELYDRLREFR--RLLGATLSPFDAWLLL--RGL--RTLPLRMERQNENAEALAEFLEEHPKV 277 (386)
T ss_dssp TTTSSSE-EEEEEESSHHHHHHHHHHHH--HHHT-B--HHHHHHHH--HHH--TTHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred ccCCcceeeEEEEECchhhhhhhhcchh--hhcCccchHHHHHHHh--cCC--CcHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2666653 3555544321 2233444444443322 233 357889999999999999999984 33
Q ss_pred E-EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 242 H-VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 242 ~-v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
+ |...+ .-..++.+.+... ...+.+.++...+...
T Consensus 278 ~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~---~~~~~~f~~~l~l~~~ 328 (386)
T PF01053_consen 278 KRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG---EEAARRFLDALKLFSI 328 (386)
T ss_dssp EEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH---HHHHHHHHHH-SSSEE
T ss_pred CeEEEcccccccceeeeeecccccCceeEEEeccc---hhhhHhHHhhhhhHhh
Confidence 3 33221 1122666666542 2467777777665544
No 223
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.33 E-value=4.9e-05 Score=76.61 Aligned_cols=156 Identities=16% Similarity=0.169 Sum_probs=94.5
Q ss_pred EEEEcCcccccccC-------hHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--------CCc
Q psy10669 126 FLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--------TGE 176 (337)
Q Consensus 126 lII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--------~Gg 176 (337)
.||+. +.+++.++ ++.++++|+++|++||+|+.|+ |+ .+ |+ ...+| -|+
T Consensus 234 avIvE-pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Piga 311 (459)
T PRK11522 234 AVILE-PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGA 311 (459)
T ss_pred EEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEEechhhhCCCcccee
Confidence 55654 56665433 5678899999999999999995 53 22 11 11122 233
Q ss_pred hhhh-hHHHHHhhccCCCC-CCCC--cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-Eec-CCC
Q psy10669 177 KILY-DYEEKINNAVFPSL-QGGP--HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVT-GGT 248 (337)
Q Consensus 177 ~i~~-~l~~~i~~~~~p~~-~g~~--~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~-~~t 248 (337)
++.+ ++.+..... |+. .+|. |+...|+..+++..+.+ ++..+++.++.++|.+.|++. .+. ++. --.
T Consensus 312 v~~~~~i~~~~~~~--~~~~~~T~~gnp~~~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG 386 (459)
T PRK11522 312 TIATEEVFSVLFDN--PFLHTTTFGGNPLACAAALATINVLLE---QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARG 386 (459)
T ss_pred EEEcHHHHHHhccC--CcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEe
Confidence 3333 444433211 222 2333 66677776677776643 257889999999999999874 343 221 112
Q ss_pred CCeEEEEEecCCCcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669 249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN----TGISLAAE 289 (337)
Q Consensus 249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~----~girig~~ 289 (337)
...++.|.+.+.. .+..+.+.|.+.||.+... ..+|+.-+
T Consensus 387 ~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Pp 430 (459)
T PRK11522 387 KGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGTLNNAKTIRIEPP 430 (459)
T ss_pred ceeEEEEEecCch-HHHHHHHHHHHCCeEEEecCCCCCEEEEECC
Confidence 4667778776543 3556677777789998753 14666443
No 224
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.33 E-value=0.00042 Score=68.79 Aligned_cols=247 Identities=13% Similarity=0.052 Sum_probs=135.1
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC---CCCCcceeecCCC
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD---PEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~---~~~~~~~v~~~Sg 105 (337)
..++|-..++.. +|.+.+++...+...-..+|+- .|. .++-....+.+.+.+|.+ .. .+|..++|
T Consensus 45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G~---~~lr~aia~~~~~~~g~~~~~~~---~~I~it~G 114 (410)
T PRK06290 45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NGI---QEFKEAAARYMEKVFGVKDIDPV---TEVIHSIG 114 (410)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CCc---HHHHHHHHHHHHHHcCCCcCCCc---ceEEEccC
Confidence 357777777764 7778888765432110111221 222 233221122333334543 31 15889999
Q ss_pred c-hhHHHHHHhhCCc-----------------------------------------cc-----ccccEEEEc-Ccc-ccc
Q psy10669 106 S-PANFAVCEKALPT-----------------------------------------NN-----ARFDFLSSG-TTC-YSR 136 (337)
Q Consensus 106 t-~AN~~v~~aLl~~-----------------------------------------~~-----a~pklII~~-~S~-~~~ 136 (337)
+ ++...++.+++++ ++ .++|+|++. +++ -+.
T Consensus 115 s~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~ 194 (410)
T PRK06290 115 SKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGA 194 (410)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCc
Confidence 5 5666666777653 00 126788877 533 247
Q ss_pred ccChHH---HHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669 137 CLDYAR---FRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKIN 187 (337)
Q Consensus 137 ~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~ 187 (337)
..+.++ |.++|+++|++|++|+++.--... .+..+. | .| |+++. ++.+.+.
T Consensus 195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~ 274 (410)
T PRK06290 195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFA 274 (410)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHH
Confidence 777654 556789999999999998642211 112222 1 13 77665 4666555
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCC------
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNK------ 261 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~------ 261 (337)
....+...++ ..+...++..++.+ ....++.++++.++.+++.+.|.+.|+.+... ..+-.+++.+...-
T Consensus 275 ~~~~~~~~~~-~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~g~f~l~v~lp~~~~~~~~~ 350 (410)
T PRK06290 275 TVKDNNDSGQ-FIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEVGFKAEMP-GGTFYLYVKAPKGTKSGIKF 350 (410)
T ss_pred HHHhccccCC-cHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CeeeEEEEECCCccccCCCC
Confidence 4433322222 22333333333322 11235667888899999999999999887642 23455667775421
Q ss_pred cchHHHHHHHhhc-CceeccCc----ccchhhhhH
Q psy10669 262 LTGSKVELVLEEI-AIACNKNT----GISLAAEIQ 291 (337)
Q Consensus 262 ~~~~~~~~~L~~~-gI~v~~~~----girig~~~~ 291 (337)
.+..++...|.+. ++.+.+-. .+||+....
T Consensus 351 ~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~ 385 (410)
T PRK06290 351 ENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFE 385 (410)
T ss_pred CCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcc
Confidence 2456676766654 55543311 578865443
No 225
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.32 E-value=8e-05 Score=73.94 Aligned_cols=146 Identities=14% Similarity=0.162 Sum_probs=89.0
Q ss_pred hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~ 197 (337)
+++|+++|+++|++||+|+.|+ |+ -+ + +.+.+| -|+++.. ++.+.+.......+++
T Consensus 210 l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~- 287 (408)
T PRK04612 210 LARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFG- 287 (408)
T ss_pred HHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCC-
Confidence 6679999999999999999997 32 11 1 111122 2333333 5655555544444454
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC-CcchHHHHHHHhh
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN-KLTGSKVELVLEE 273 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~-~~~~~~~~~~L~~ 273 (337)
.++...++...++..+.+ ++..+++.++.++|.++|++. .+.++.. -...-++-|.+... .-....+.+.|.+
T Consensus 288 ~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~ 364 (408)
T PRK04612 288 GNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAE 364 (408)
T ss_pred CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHH
Confidence 456666666666666543 367888999999999998873 2333321 12344555655421 1134566677888
Q ss_pred cCceeccCc--ccchhhhh
Q psy10669 274 IAIACNKNT--GISLAAEI 290 (337)
Q Consensus 274 ~gI~v~~~~--girig~~~ 290 (337)
.||.+.+.. .||+..+.
T Consensus 365 ~Gvlv~~~g~~~lRl~Ppl 383 (408)
T PRK04612 365 HGLLLLQAGPDVLRFVPAL 383 (408)
T ss_pred CCeEEeeCCCCEEEEcCCc
Confidence 899986543 67776554
No 226
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.31 E-value=7.1e-05 Score=74.94 Aligned_cols=196 Identities=13% Similarity=0.114 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhC--C-c------------------------------
Q psy10669 74 IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKAL--P-T------------------------------ 119 (337)
Q Consensus 74 ~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl--~-~------------------------------ 119 (337)
.-.++....+.+++++|.+.... .+..++|| .++..++.++- + +
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeee
Confidence 34455555568899999983211 45566777 57766666653 1 1
Q ss_pred --------------ccc------cccEEEEc-Ccccc--cccChHHHHHHhhhcCCeEEEeccccccccc----------
Q psy10669 120 --------------NNA------RFDFLSSG-TTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA---------- 166 (337)
Q Consensus 120 --------------~~a------~pklII~~-~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------- 166 (337)
+.+ +..++|++ ++.|. ..-|+++|.++|+++|+++++|+||+.+..-
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence 000 12344443 44453 6789999999999999999999999964411
Q ss_pred -e-----eeeecc------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669 167 -G-----VKGVTK------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231 (337)
Q Consensus 167 -g-----~~~T~~------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~ 231 (337)
| +.+++| .||+++. ++.+.+... +|+.. +..+.. .+.++++.+-...++++.++-.+++++
T Consensus 261 ~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~-y~g~~--~~s~~~-~~~~~ll~~G~~g~~~li~~~~~~a~~ 336 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKS-YPGRA--SASPSL-DVLITLLSLGSKGYLELLKERKEMYKY 336 (444)
T ss_pred ccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHh-ccCCC--CChHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 1 223333 2566655 466666654 55533 223333 344455555557788999999999999
Q ss_pred HHHHHHh----CCCEEecCCCCCeEEE-EEecCC-CcchHHHHHHHhhcCc
Q psy10669 232 LSDEMIK----RGYHVVTGGTDVHLIL-IDLRKN-KLTGSKVELVLEEIAI 276 (337)
Q Consensus 232 l~~~L~~----~G~~v~~~~t~~h~v~-V~~~~~-~~~~~~~~~~L~~~gI 276 (337)
+.+.|.+ .|-++.. -.+|+|-+ +.++.. +.+...+...|...+|
T Consensus 337 l~~~L~~l~~~~~~~~~~-~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v 386 (444)
T TIGR03531 337 LKELLQKLAERHGERLLD-TPENPISSAMTLSTLKGKDPTMLGSMLYSRRV 386 (444)
T ss_pred HHHHHHHHHHhhCcEeec-CCCCceeEEEecccccccCHHHHHHHHHhCCC
Confidence 9999887 5777764 13666542 222211 2245666677765444
No 227
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=98.31 E-value=0.00021 Score=68.97 Aligned_cols=236 Identities=18% Similarity=0.232 Sum_probs=147.0
Q ss_pred cceeeeccC-CCC-CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC-c
Q psy10669 31 NGIELIASE-NFT-SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG-S 106 (337)
Q Consensus 31 ~~i~l~ase-n~~-~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg-t 106 (337)
.-|.|+-++ ++. +|.|++|+...+.+- ..|||.. -..+.+.+-. -.++=++-+ .++| +.|..| -
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~~----~~~~~~ai~~----w~~~r~~~~i~~e~---i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPYG----SDELYAAIAH----WFKQRHQWEIKPEW---IVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCCC----CHHHHHHHHH----HHHHhcCCCCCcce---EEEcCcch
Confidence 345555443 333 999999998764432 3566622 1122233322 222222221 2334 777777 5
Q ss_pred hhHHHHHHhhCCc--------------------------------------------ccc----ccc-EEEEcCcc-ccc
Q psy10669 107 PANFAVCEKALPT--------------------------------------------NNA----RFD-FLSSGTTC-YSR 136 (337)
Q Consensus 107 ~AN~~v~~aLl~~--------------------------------------------~~a----~pk-lII~~~S~-~~~ 136 (337)
.+...++.+|.++ +.+ ++| +|.|++-+ -++
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Gr 173 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGR 173 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCc
Confidence 6766667888654 111 134 55566433 468
Q ss_pred ccChHHHH---HHhhhcCCeEEEeccccccccce-------------------eeeeccC---Cchh-----hh--hHHH
Q psy10669 137 CLDYARFR---QICDETDSIMFADMSHISGLIAG-------------------VKGVTKT---GEKI-----LY--DYEE 184 (337)
Q Consensus 137 ~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~g-------------------~~~T~~~---Gg~i-----~~--~l~~ 184 (337)
.+.-++|. +||.+||+++|.|+=|.==++.| ++++.|. .|+- +. +++.
T Consensus 174 vwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~ 253 (388)
T COG1168 174 VWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRA 253 (388)
T ss_pred cccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHH
Confidence 88877655 89999999999999997533332 1222221 2222 22 3444
Q ss_pred HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCc
Q psy10669 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKL 262 (337)
Q Consensus 185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~ 262 (337)
+..+.+--..+++|+.-++.|.-+|..+= ++=..+..+-+.+|-+++++.|.+. ++++.. .-.|-+.++|++..++
T Consensus 254 ~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~-p~gTYL~WLD~r~l~l 331 (388)
T COG1168 254 KFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTE-PQGTYLAWLDCRELGL 331 (388)
T ss_pred HHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec-CCCceeeeeeccccCC
Confidence 33333222446689999999988888764 2333677778889999999999994 898874 3457899999999999
Q ss_pred chHHHHHH-HhhcCceecc
Q psy10669 263 TGSKVELV-LEEIAIACNK 280 (337)
Q Consensus 263 ~~~~~~~~-L~~~gI~v~~ 280 (337)
+..+..+. |++++|.+++
T Consensus 332 ~d~~l~~~ll~~akVal~~ 350 (388)
T COG1168 332 DDSELAEFLLEEAKVALSP 350 (388)
T ss_pred ChHHHHHHHHHhhcEeccC
Confidence 87555555 4568999987
No 228
>PLN02590 probable tyrosine decarboxylase
Probab=98.31 E-value=0.00027 Score=72.49 Aligned_cols=183 Identities=17% Similarity=0.149 Sum_probs=113.3
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCC----cceeecCCCchhHHHHHHhh------------CCc----------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQW----GCNVQPYSGSPANFAVCEKA------------LPT---------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~----~~~v~~~Sgt~AN~~v~~aL------------l~~---------------- 119 (337)
.-..++|..+.+-++++||.+...| +--+..++||.||+..+.+- .++
T Consensus 166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KA 245 (539)
T PLN02590 166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKA 245 (539)
T ss_pred chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHH
Confidence 3456899999999999999886322 12355566699997765442 011
Q ss_pred -------------------------------cc----c---cccEEEEc--CcccccccChHHHHHHhhhcCCeEEEecc
Q psy10669 120 -------------------------------NN----A---RFDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMS 159 (337)
Q Consensus 120 -------------------------------~~----a---~pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~A 159 (337)
.+ + .|-+||.+ .+..+..-|+++|.+||+++|++|.||+|
T Consensus 246 a~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA 325 (539)
T PLN02590 246 CLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAA 325 (539)
T ss_pred HHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecc
Confidence 00 1 16566665 44467899999999999999999999999
Q ss_pred ccccccc---------ee------eeeccC-------Cchhh-hh---HH-------HHHhhc------cCC----CCCC
Q psy10669 160 HISGLIA---------GV------KGVTKT-------GEKIL-YD---YE-------EKINNA------VFP----SLQG 196 (337)
Q Consensus 160 H~~Gli~---------g~------~~T~~~-------Gg~i~-~~---l~-------~~i~~~------~~p----~~~g 196 (337)
++...+. |+ +.-.|| .|+++ .+ +. +.+... .+. .++.
T Consensus 326 ~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l 405 (539)
T PLN02590 326 YAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL 405 (539)
T ss_pred hhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC
Confidence 8776544 21 111122 23332 21 21 223211 000 1121
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEec
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLR 258 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~ 258 (337)
+=. .....+-.+++.+-...|.++.++.+++|++|.+.+.+ .+|+++. +....+|.++
T Consensus 406 sRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~---~~~l~iVcFr 464 (539)
T PLN02590 406 SRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT---TRYFSLVCFR 464 (539)
T ss_pred CCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec---CCceEEEEEE
Confidence 211 24455556666665678899999999999999999988 5899986 2334445444
No 229
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.30 E-value=1.2e-05 Score=80.37 Aligned_cols=88 Identities=17% Similarity=0.031 Sum_probs=68.4
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++.....+| ++++++.|.++ .+.+.||+.|+..++.+++++
T Consensus 62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~ 132 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVK 132 (431)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEE
Confidence 456677888 57899999876 688999999988888887654
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+.+ ++++|++. .++ .+...|+++|.++|+++|+++++|.+|..++..
T Consensus 133 ~vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~ 194 (431)
T PRK08248 133 FVDPSDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL 194 (431)
T ss_pred EECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC
Confidence 101 26788775 333 358899999999999999999999999876543
No 230
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.29 E-value=0.0003 Score=68.78 Aligned_cols=252 Identities=14% Similarity=0.064 Sum_probs=147.3
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCC-CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec--CCCc
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGL-PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSGS 106 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~-~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sgt 106 (337)
.+..|..|-=-.+|++|++++...+.+....|. .-.-.+++-++ .++-..+++.++++|+.+.. | .|.| .|||
T Consensus 3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F-~~i~~~~~~~Lr~Ll~~P~~-y--~Vlfl~GggT 78 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWF-SSLLAQAEADLRDLLGIPDE-Y--GVVFLQGGSS 78 (364)
T ss_pred cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHH-HHHHHHHHHHHHHHhCCCCC-C--eEEEEeccHH
Confidence 456788888888999999999988776543332 22333444333 44555677899999998432 2 3444 3447
Q ss_pred hhHHHHHHhhCCc------------------ccc-c-----------------------------ccEEEEc--Cccccc
Q psy10669 107 PANFAVCEKALPT------------------NNA-R-----------------------------FDFLSSG--TTCYSR 136 (337)
Q Consensus 107 ~AN~~v~~aLl~~------------------~~a-~-----------------------------pklII~~--~S~~~~ 136 (337)
.+.-++..-|+.+ +.+ + .+.|.++ +++.+.
T Consensus 79 ~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~~~~~d~~~v~~t~NETstGv 158 (364)
T PRK12462 79 LQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAELDWDARAPFRHYVSNETVEGL 158 (364)
T ss_pred HHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHhccCCCCcEEEEccCCCCceE
Confidence 7888888888753 001 0 1222111 333333
Q ss_pred ccChHHHHHHhhhcCCeEEEeccccccccc------eeeeec------cCC-chhh-h-hHHHHHhhccCCC--------
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLIA------GVKGVT------KTG-EKIL-Y-DYEEKINNAVFPS-------- 193 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~T~------~~G-g~i~-~-~l~~~i~~~~~p~-------- 193 (337)
..| ++.+..+++++||++=.+|-.. ++..++ |-| ++++ . ++.++.++. .|.
T Consensus 159 ~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~~-~p~~ldy~~~~ 232 (364)
T PRK12462 159 QFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDT-LPPMLDFRTHV 232 (364)
T ss_pred ecC-----cccccCCCeEEEEcCchhhCCCCChHHccEEEeeccccCCCCceEEEEECHHHHhhcccc-CCchhhHHHHH
Confidence 332 3444468999999996665554 344443 334 2222 2 333322211 111
Q ss_pred ----CCCCCcHHHHHHHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhCC-CEEec--CCCCCeEEE-EEecCCCcc
Q psy10669 194 ----LQGGPHNHAIGAIATAMLQAQSD--EFKSYQAQVKANASHLSDEMIKRG-YHVVT--GGTDVHLIL-IDLRKNKLT 263 (337)
Q Consensus 194 ----~~g~~~~~~iaala~a~~e~~~~--~~~~y~~~v~~na~~l~~~L~~~G-~~v~~--~~t~~h~v~-V~~~~~~~~ 263 (337)
+.-||....|-++..+++++++. ..+...++-.+.++.+++.+.+.. |-... ...-+.+.+ ..+.+..+
T Consensus 233 ~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l- 311 (364)
T PRK12462 233 EHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRL- 311 (364)
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHH-
Confidence 23489999999999999999865 557888888999999999998854 44332 122233332 23343332
Q ss_pred hHHHHHHHhhcCceeccCc----ccchhh-hhHh
Q psy10669 264 GSKVELVLEEIAIACNKNT----GISLAA-EIQA 292 (337)
Q Consensus 264 ~~~~~~~L~~~gI~v~~~~----girig~-~~~t 292 (337)
-.+.-+.+++.|+.--+-. |+|++. ++++
T Consensus 312 ~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~ 345 (364)
T PRK12462 312 DTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVS 345 (364)
T ss_pred HHHHHHHHHHCCCccccCCcccCceEEEcCCCCC
Confidence 2333444556688764322 888865 5555
No 231
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=98.28 E-value=8.9e-06 Score=79.96 Aligned_cols=154 Identities=14% Similarity=0.052 Sum_probs=98.4
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| +++++++|.++ ++.+.||+.|..+++. ++++
T Consensus 48 ~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~ 117 (380)
T PRK06176 48 GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCT 117 (380)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEE
Confidence 455677888 58899999886 6889999988777664 5443
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~-- 173 (337)
+.+ ++++|++. +++ .+...|+++|.++|+++|+++++|.+|..++.. | +.|.+|
T Consensus 118 ~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l 197 (380)
T PRK06176 118 IIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYL 197 (380)
T ss_pred EcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceec
Confidence 111 26887775 443 357889999999999999999999999987654 1 222222
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.||+++. ++.+++.... ...|....+.-+.+. ...+ .....+.++..+|++.+++.|.+.
T Consensus 198 ~g~~d~~gG~vv~~~~~~~~~~~~~~--~~~G~~~~~~~~~l~--~~gl--~tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 198 GGHSDVVAGLVTTNNEALAQEIAFFQ--NAIGGVLGPQDSWLL--QRGI--KTLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred cCCccceeeEEEecHHHHHHHHHHHH--HHhcCCCCHHHHHHH--Hhcc--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 2676654 3444443211 111222222222211 1111 234677888889999999999884
No 232
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.28 E-value=8e-05 Score=74.69 Aligned_cols=157 Identities=19% Similarity=0.218 Sum_probs=92.5
Q ss_pred cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--CCch----
Q psy10669 125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--TGEK---- 177 (337)
Q Consensus 125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--~Gg~---- 177 (337)
..||+. +.+++. .+ +++++++|+++|+++|+|+.|+ |+ .+ |+ ...+| .||+
T Consensus 226 AavIvE-pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pig 303 (442)
T TIGR03372 226 AAIILE-PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIG 303 (442)
T ss_pred EEEEEe-CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeeeehhhhcCCcccce
Confidence 455654 466544 34 5678899999999999999994 42 22 11 11122 1342
Q ss_pred --hhh-hHHHHHhhccCCCC-CCCC--cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-Eec-CC
Q psy10669 178 --ILY-DYEEKINNAVFPSL-QGGP--HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVT-GG 247 (337)
Q Consensus 178 --i~~-~l~~~i~~~~~p~~-~g~~--~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~-~~ 247 (337)
+.. ++.+.+... |+. .+|. |+...|+..+++..+.+ +...+++.+..++|.+.|++. .+. .+. --
T Consensus 304 avv~~~~i~~~~~~~--~~~~~~T~~gnp~~~Aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR 378 (442)
T TIGR03372 304 ATIATEAVFSVLFDN--PFLHTTTFGGNPLACAAALATINELLE---KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR 378 (442)
T ss_pred EEEecHHHHHhhhcc--CccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 333 455544211 222 2333 66667666666766643 246677888888888888763 222 111 11
Q ss_pred CCCeEEEEEecCCCcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669 248 TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN----TGISLAAE 289 (337)
Q Consensus 248 t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~----~girig~~ 289 (337)
....++.|.+.+.. ....+.+.|.+.||.+... ..+||.-+
T Consensus 379 G~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Pp 423 (442)
T TIGR03372 379 GKGLLMAIEFRDNE-IGYAFAKELFQQNILVAGTLNNAKSIRIEPP 423 (442)
T ss_pred cceEEEEEEeCChH-HHHHHHHHHHHCCcEEeecCCCCCEEEEECC
Confidence 35677778876543 4456777777789999753 25666433
No 233
>KOG2862|consensus
Probab=98.26 E-value=0.00014 Score=68.38 Aligned_cols=240 Identities=13% Similarity=0.043 Sum_probs=152.8
Q ss_pred eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669 34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC 113 (337)
Q Consensus 34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~ 113 (337)
.|.|--.-+|+.|++|+... ..|+...-+ -+|-....+-++..|....++ --+.+.||+.+.-+.+
T Consensus 20 L~gPGPsnl~~~V~~A~~~~-----~lgh~sPe~-------~qIm~~v~egikyVFkT~n~~--tf~isgsGh~g~E~al 85 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRP-----SLGHMSPEF-------VQIMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL 85 (385)
T ss_pred eecCCCcCCCHHHHHhhcCC-----ccccCCHHH-------HHHHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence 57777777899999998632 234433322 233333345667788766531 1277788888766655
Q ss_pred HhhCCc---------------------------------------------ccc--cccEEEEc--CcccccccC-hHHH
Q psy10669 114 EKALPT---------------------------------------------NNA--RFDFLSSG--TTCYSRCLD-YARF 143 (337)
Q Consensus 114 ~aLl~~---------------------------------------------~~a--~pklII~~--~S~~~~~~d-~~~l 143 (337)
.-++.| +++ +|++|.+. +|+-+...| .+.+
T Consensus 86 ~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~ 165 (385)
T KOG2862|consen 86 VNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAIS 165 (385)
T ss_pred HhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHH
Confidence 655544 112 38887775 677788888 5567
Q ss_pred HHHhhhcCCeEEEeccccccccc------ee--eeec-------cCC-chhhh-h-------------------HHHHHh
Q psy10669 144 RQICDETDSIMFADMSHISGLIA------GV--KGVT-------KTG-EKILY-D-------------------YEEKIN 187 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~------g~--~~T~-------~~G-g~i~~-~-------------------l~~~i~ 187 (337)
.++|++++++|+||.--+.|=.. |+ .-|+ |.| ++|.. + +....+
T Consensus 166 g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~ 245 (385)
T KOG2862|consen 166 GELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGN 245 (385)
T ss_pred HHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcc
Confidence 79999999999999876666544 21 2222 234 33321 1 111111
Q ss_pred hcc---CCCC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCC---CeEEEEEecCC
Q psy10669 188 NAV---FPSL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTD---VHLILIDLRKN 260 (337)
Q Consensus 188 ~~~---~p~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~---~h~v~V~~~~~ 260 (337)
+-- -|.+ .-||....+-+|-+|+..+.++..++..++-.+++++|...|++.|++......+ +-.-.|. -..
T Consensus 246 ~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~-vp~ 324 (385)
T KOG2862|consen 246 FWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVK-VPY 324 (385)
T ss_pred hhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeee-cCC
Confidence 100 0111 3588889999999999999877778899999999999999999999987752111 1111222 245
Q ss_pred CcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669 261 KLTGSKVELVLEE-IAIACNKNT------GISLAA 288 (337)
Q Consensus 261 ~~~~~~~~~~L~~-~gI~v~~~~------girig~ 288 (337)
++|..++...+.. +++.+.--. -+|||+
T Consensus 325 gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl 359 (385)
T KOG2862|consen 325 GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGL 359 (385)
T ss_pred CCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEE
Confidence 7788888888776 466654322 789984
No 234
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.25 E-value=3.1e-05 Score=76.10 Aligned_cols=192 Identities=14% Similarity=0.081 Sum_probs=126.5
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| +++++|=|.+. .+.|.||..|...++.+++++
T Consensus 61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~ 131 (396)
T COG0626 61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVT 131 (396)
T ss_pred CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEE
Confidence 577788899 47788888886 699999999988888999874
Q ss_pred -----------ccc---cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc-
Q psy10669 120 -----------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK- 173 (337)
Q Consensus 120 -----------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~- 173 (337)
+.. ++|+|.+. +|+- ....|+++|.++|+++|++++||-+-..++.- | +.|.+|
T Consensus 132 ~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKy 211 (396)
T COG0626 132 FVDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKY 211 (396)
T ss_pred EECCCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEecccc
Confidence 111 37888887 5552 38899999999999999999999999998886 2 334433
Q ss_pred -------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE
Q psy10669 174 -------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH 242 (337)
Q Consensus 174 -------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~ 242 (337)
-||.+++ .+.+.+....+ ...|+...|-=|-+ .++-+ ....-++++..+||..+++.|.+ +.++
T Consensus 212 l~GHsDvl~G~v~~~~~~~~~~~~~~~~-~~~G~~l~p~dA~l--~lRGl--kTL~~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 212 LGGHSDVLGGVVLTPNEELYELLFFAQR-ANTGAVLSPFDAWL--LLRGL--RTLALRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred ccCCcceeeeEEecChHHHHHHHHHHHH-hhcCCCCCHHHHHH--HHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 2676664 35554422222 11333333433322 22333 34678899999999999999998 3443
Q ss_pred -EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 243 -VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 243 -v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
|+.++ .-.-++.+.+.. . ..+.+.++..-+..-
T Consensus 287 ~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~---~-~~~~~f~~~L~l~~~ 335 (396)
T COG0626 287 KVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN---E-EAAKKFLDSLKLFKL 335 (396)
T ss_pred EEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC---h-HHHHHHHHhCCccEE
Confidence 33322 123344444432 2 566777776555544
No 235
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.25 E-value=0.00023 Score=68.93 Aligned_cols=222 Identities=13% Similarity=0.125 Sum_probs=125.5
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS- 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt- 106 (337)
..-|+|...+|.. +|.+.+++...+.. ..+||.. | ..+ .|+.++++++.+. -+|..++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~----~---~~~----lr~~ia~~~~~~~----~~I~it~G~~ 92 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPKA----S---HAD----LTAALADRWDVSP----EQVWLANGGD 92 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCCC----C---HHH----HHHHHHHHhCCCc----ceEEECCCHH
Confidence 4568888777765 88888888765332 1223211 1 122 3457788888876 368888884
Q ss_pred hhHHHHHHhhCCc-----------------------------------------ccc----cccEEEEcCccc--ccccC
Q psy10669 107 PANFAVCEKALPT-----------------------------------------NNA----RFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 107 ~AN~~v~~aLl~~-----------------------------------------~~a----~pklII~~~S~~--~~~~d 139 (337)
++...++.+++++ .+. ++|+|++..-++ +...+
T Consensus 93 ~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~NPTG~~~s 172 (357)
T PRK14809 93 GALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIP 172 (357)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCCCCCcCCC
Confidence 6766666777653 001 267777763344 48888
Q ss_pred hHHHHHHhhhc--CCeEEEeccccc----c----ccc-----eeeeec-c----CC---chhhh--hHHHHHhhccCCCC
Q psy10669 140 YARFRQICDET--DSIMFADMSHIS----G----LIA-----GVKGVT-K----TG---EKILY--DYEEKINNAVFPSL 194 (337)
Q Consensus 140 ~~~l~eia~~~--ga~l~vD~AH~~----G----li~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~ 194 (337)
.+++.+|++.. +.++++|+++.- + .+. .+.+|. | .| |++++ ++.+++.....|.
T Consensus 173 ~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~- 251 (357)
T PRK14809 173 LDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNTPF- 251 (357)
T ss_pred HHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCCCC-
Confidence 88888877654 789999999752 1 111 122332 2 13 66655 5666666543222
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
+++.....+...++.. ....++.++...++-+++.+.|.+.++ . .....+++.+. +..++.+.|.+.
T Consensus 252 --~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~~g~f~~~~~~----~~~~~~~~l~~~ 318 (357)
T PRK14809 252 --AASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAPTW---E--SAGNFVLAEVG----DASAVAEAAQER 318 (357)
T ss_pred --CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCccC---C--CCCCEEEEECC----CHHHHHHHHHHC
Confidence 2333333333333321 112234444555555556666654332 2 23345567663 356777888888
Q ss_pred CceeccCc
Q psy10669 275 AIACNKNT 282 (337)
Q Consensus 275 gI~v~~~~ 282 (337)
||.+.+-.
T Consensus 319 gv~v~~g~ 326 (357)
T PRK14809 319 GVIVRDCT 326 (357)
T ss_pred CEEEEECc
Confidence 99998744
No 236
>PLN00144 acetylornithine transaminase
Probab=98.25 E-value=0.00016 Score=71.07 Aligned_cols=159 Identities=15% Similarity=0.164 Sum_probs=90.1
Q ss_pred ccEEEEcCc-----ccccccC-hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchh----
Q psy10669 124 FDFLSSGTT-----CYSRCLD-YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKI---- 178 (337)
Q Consensus 124 pklII~~~S-----~~~~~~d-~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i---- 178 (337)
++.||+.+. .++.+.+ +++|+++|+++|++||+|+.|+ .|-.+ + +.+..| .||+-
T Consensus 168 ~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G~pig~v 247 (382)
T PLN00144 168 TAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGLPIGAV 247 (382)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCCcceEEE
Confidence 577887743 2232222 5679999999999999999986 22211 1 111122 12322
Q ss_pred -hh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEec--CCCCCeE
Q psy10669 179 -LY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVT--GGTDVHL 252 (337)
Q Consensus 179 -~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~--~~t~~h~ 252 (337)
.. ++.+.+........+ +.++...++..+.+..+.+ .++.+++.+..++|.+.|.+ ..+..+. .+ ...+
T Consensus 248 ~~~~~~~~~~~~~~~~~T~-~~~pl~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~ 322 (382)
T PLN00144 248 LVTEKVASAINPGDHGSTF-AGGPLVCNAALAVLDKISK---PGFLASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLL 322 (382)
T ss_pred EEcHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHHHhhCCCceeeec-CceE
Confidence 22 465555543333334 3445555555555666543 35667777777777776665 1222111 11 4456
Q ss_pred EEEEecCCCcchHHHHHHHhhcCceeccC---cccchhhhh
Q psy10669 253 ILIDLRKNKLTGSKVELVLEEIAIACNKN---TGISLAAEI 290 (337)
Q Consensus 253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~~---~girig~~~ 290 (337)
+++.+. .....+...+.+.||.+.+. ..|||.-+.
T Consensus 323 ~~l~l~---~~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~ 360 (382)
T PLN00144 323 VGIQLD---VPAGPLVDACRDSGLLVLTAGKGDVVRLVPPL 360 (382)
T ss_pred EEEEec---CccHHHHHHHHHCCeEEeecCCCCEEEEeCCC
Confidence 667662 23466777778889998753 377776554
No 237
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.24 E-value=0.0001 Score=72.29 Aligned_cols=175 Identities=17% Similarity=0.145 Sum_probs=108.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCC----cceeecCCCchhHHHHHHhh---------------CCc-----------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQW----GCNVQPYSGSPANFAVCEKA---------------LPT----------- 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~----~~~v~~~Sgt~AN~~v~~aL---------------l~~----------- 119 (337)
.+....++|..+.+-++++||.+.+.. +..+..++||.+|+..+.+- .++
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 152 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY 152 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 345567899999999999999983211 13455566689997665443 011
Q ss_pred -----------------------------c------ccc---ccEEEEc--CcccccccChHHHHHHhhhcCCeEEEecc
Q psy10669 120 -----------------------------N------NAR---FDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMS 159 (337)
Q Consensus 120 -----------------------------~------~a~---pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~A 159 (337)
+ .++ |-+||++ .+..+..-|+++|.+||++++++|.||+|
T Consensus 153 S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA 232 (373)
T PF00282_consen 153 SIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAA 232 (373)
T ss_dssp HHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEET
T ss_pred HHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccc
Confidence 0 011 4345554 44457889999999999999999999999
Q ss_pred ccccccc---------e------e-eeeccC------Cchhhh-h---HHHHH--h-hccC--------------CCCCC
Q psy10669 160 HISGLIA---------G------V-KGVTKT------GEKILY-D---YEEKI--N-NAVF--------------PSLQG 196 (337)
Q Consensus 160 H~~Gli~---------g------~-~~T~~~------Gg~i~~-~---l~~~i--~-~~~~--------------p~~~g 196 (337)
++...+. | + ...||- .|+++. + +.... + ..++ +++++
T Consensus 233 ~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~ 312 (373)
T PF00282_consen 233 YGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQG 312 (373)
T ss_dssp TGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSS
T ss_pred ccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccc
Confidence 8764433 1 1 122321 233332 1 32211 1 0011 22344
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT 245 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~ 245 (337)
+= -...+.+-..++..-...|.++.++.++++++|++.|++. +|+++.
T Consensus 313 SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~ 361 (373)
T PF00282_consen 313 SR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN 361 (373)
T ss_dssp SG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred cc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 43 3344555566666666788999999999999999999995 588875
No 238
>KOG1383|consensus
Probab=98.23 E-value=0.00014 Score=71.57 Aligned_cols=155 Identities=17% Similarity=0.250 Sum_probs=109.5
Q ss_pred ccEEEEcCccc--ccccChHHHHHHhhh-cCCeEEEeccccccccc--e-------------ee----eecc-----CC-
Q psy10669 124 FDFLSSGTTCY--SRCLDYARFRQICDE-TDSIMFADMSHISGLIA--G-------------VK----GVTK-----TG- 175 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~--g-------------~~----~T~~-----~G- 175 (337)
+..+|....++ +...|+++|.++.-+ ++..+.||++ .-|+|. + ++ .+|| +|
T Consensus 219 ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~ 297 (491)
T KOG1383|consen 219 TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGS 297 (491)
T ss_pred eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeeccc-CccccccccccCccccccCCCCceeEeeccceeeeeecCc
Confidence 46666654444 578899999998877 9999999999 444444 1 22 2332 34
Q ss_pred chhhh---hH-HH----HHhh--c--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE
Q psy10669 176 EKILY---DY-EE----KINN--A--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH 242 (337)
Q Consensus 176 g~i~~---~l-~~----~i~~--~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~ 242 (337)
+.+++ ++ .+ .++. + .-|++-|+=....+|+.-+++..+-+.+|.+..++++++++.|++++++ .|++
T Consensus 298 ~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~ 377 (491)
T KOG1383|consen 298 SWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIK 377 (491)
T ss_pred EEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccce
Confidence 44443 22 11 1111 1 1244445555577888888888888889999999999999999999999 6899
Q ss_pred EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc
Q psy10669 243 VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 243 v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
+++ .+-+-++..++...+-.++++.|.+.|..+|.=+
T Consensus 378 i~g---kp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq 414 (491)
T KOG1383|consen 378 IVG---KPLVSFILFGSNDVNIFELSDLLRKKGWILNALQ 414 (491)
T ss_pred ecC---CCcEEEEEccCCccchhhhhHHHHhcCcCccccC
Confidence 986 3445556667788899999999999999988533
No 239
>PRK08175 aminotransferase; Validated
Probab=98.21 E-value=0.00067 Score=66.67 Aligned_cols=155 Identities=10% Similarity=0.085 Sum_probs=90.4
Q ss_pred ccEEEEc-Ccc-cccccChH---HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c-------
Q psy10669 124 FDFLSSG-TTC-YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K------- 173 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~------- 173 (337)
+++|++. +.+ .+...|.+ +|.++|+++|+++++|+++.--... .++++. |
T Consensus 165 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGl 244 (395)
T PRK08175 165 PKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGW 244 (395)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcch
Confidence 6777765 333 35777885 5667889999999999998531111 012222 2
Q ss_pred CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 174 TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 174 ~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
+.|+++. ++.+.+.... .....+.+.+...+...++..- +...+..++.+.++.+++.+.|.+.|+.+.. ....-
T Consensus 245 RiG~~~~~~~l~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-p~~g~ 321 (395)
T PRK08175 245 RIGFMVGNPELVSALARIK-SYHDYGTFTPLQVAAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEM-PKASM 321 (395)
T ss_pred hheeeeCCHHHHHHHHHHH-hhcccCCCcHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccC-CCEEE
Confidence 2366655 5666555331 1111122223333333334321 2234566777888889999999998887653 23455
Q ss_pred EEEEEecCC--CcchHHHHH-HHhhcCceeccC
Q psy10669 252 LILIDLRKN--KLTGSKVEL-VLEEIAIACNKN 281 (337)
Q Consensus 252 ~v~V~~~~~--~~~~~~~~~-~L~~~gI~v~~~ 281 (337)
.+++++... ..+..++.. .+++.||.+.+-
T Consensus 322 ~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~ 354 (395)
T PRK08175 322 YVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPG 354 (395)
T ss_pred EEEEECCcccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 677887653 123556655 456789999874
No 240
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=98.20 E-value=0.00029 Score=68.69 Aligned_cols=224 Identities=16% Similarity=0.123 Sum_probs=129.9
Q ss_pred cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669 31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P 107 (337)
Q Consensus 31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~ 107 (337)
+-|.|-..+|- .++.+.+++... ... ...|+ -... +++ ++.+++++|++. .+|.+++|+ +
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~-~~~-~~~Y~------~~~g-~~l----r~~ia~~~~~~~----~~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADI-AEL-LRLYP------DPQG-RAL----REAIAARTGVPA----DRIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHH-HHH-hhcCC------CCcH-HHH----HHHHHHHhCcCH----HHEEEcCCHHH
Confidence 44666666664 488888888653 211 11121 1111 123 457788899875 368899995 5
Q ss_pred hHHHHHHhhCCc---------------------------------------cc--c---cccEEEEc-Ccc-cccccChH
Q psy10669 108 ANFAVCEKALPT---------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYA 141 (337)
Q Consensus 108 AN~~v~~aLl~~---------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~ 141 (337)
+...++.+++++ .+ + ++|+|++. +++ .+...|.+
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 179 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD 179 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 655556777653 00 1 26877765 333 35888888
Q ss_pred HHHHHhhh--cCCeEEEeccccccc-----------cc------eeeeec-c-------CCchhh-h--hHHHHHhhccC
Q psy10669 142 RFRQICDE--TDSIMFADMSHISGL-----------IA------GVKGVT-K-------TGEKIL-Y--DYEEKINNAVF 191 (337)
Q Consensus 142 ~l~eia~~--~ga~l~vD~AH~~Gl-----------i~------g~~~T~-~-------~Gg~i~-~--~l~~~i~~~~~ 191 (337)
++.+|++. .+.++++|+++.-=. +. .+.+|. | +-|+++ . ++.+.+.....
T Consensus 180 ~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~ 259 (371)
T PRK05166 180 QLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT 259 (371)
T ss_pred HHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc
Confidence 88877654 378999999974210 10 122232 2 226644 2 46665554322
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
+ . +.+.....+...++.. ....++.++...++-+.+.+.|.+.|+.+.. .+...+++++.. +..++.+.|
T Consensus 260 ~--~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p--~~g~fl~~~~~~---~~~~l~~~l 329 (371)
T PRK05166 260 P--F-NVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAP--SRANFLFFDARR---PASAVAEAL 329 (371)
T ss_pred C--C-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCC--CcCCEEEEeCCC---CHHHHHHHH
Confidence 2 2 2333333333333321 1234556677778888899999999988654 333445777542 456777888
Q ss_pred hhcCceeccC
Q psy10669 272 EEIAIACNKN 281 (337)
Q Consensus 272 ~~~gI~v~~~ 281 (337)
.+.||.+.+-
T Consensus 330 ~~~gi~v~p~ 339 (371)
T PRK05166 330 LRQGVIVKPW 339 (371)
T ss_pred HHCCeEEecC
Confidence 8889998763
No 241
>PRK08363 alanine aminotransferase; Validated
Probab=98.20 E-value=0.0006 Score=67.05 Aligned_cols=237 Identities=15% Similarity=0.131 Sum_probs=126.5
Q ss_pred cceeeeccC----CC-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecC
Q psy10669 31 NGIELIASE----NF-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPY 103 (337)
Q Consensus 31 ~~i~l~ase----n~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~ 103 (337)
.-|+|-..+ ++ .++.+.+++...+.+. ...|+...-..++.+...+...+.+| .+. -+|.++
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~i~it 99 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-------HNYYGPSEGLPELREAIVKREKRKNGVDITP----DDVRVT 99 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh----hhEEEe
Confidence 346666444 34 4888888887654321 01222222233444222223333334 333 257788
Q ss_pred CC-chhHHHHHHhhCCc--------------------------------------------ccc--cccEEEEc-Ccc-c
Q psy10669 104 SG-SPANFAVCEKALPT--------------------------------------------NNA--RFDFLSSG-TTC-Y 134 (337)
Q Consensus 104 Sg-t~AN~~v~~aLl~~--------------------------------------------~~a--~pklII~~-~S~-~ 134 (337)
+| ++|+..++.+++++ +.. ++++|++. +.+ .
T Consensus 100 ~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 179 (398)
T PRK08363 100 AAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPT 179 (398)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCC
Confidence 88 67887778888654 000 25666664 322 3
Q ss_pred ccccC---hHHHHHHhhhcCCeEEEeccccccccc---------------eeeeec-cC----C---chhhh----hHHH
Q psy10669 135 SRCLD---YARFRQICDETDSIMFADMSHISGLIA---------------GVKGVT-KT----G---EKILY----DYEE 184 (337)
Q Consensus 135 ~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~-~~----G---g~i~~----~l~~ 184 (337)
+...+ +++|.++|+++|+++++|+++.--... .+..|. |. | |+++. ++.+
T Consensus 180 G~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~ 259 (398)
T PRK08363 180 GALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLA 259 (398)
T ss_pred CcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHH
Confidence 45666 666778899999999999997531111 012222 21 2 55542 2333
Q ss_pred HHhhccCCC--CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC-
Q psy10669 185 KINNAVFPS--LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN- 260 (337)
Q Consensus 185 ~i~~~~~p~--~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~- 260 (337)
.+....... ..-+++.+...+...++.+. ....++.++++.++.+.+.+.|.+. |+.+.. ...+...++.+...
T Consensus 260 ~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~-p~g~~~~~~~l~~~~ 337 (398)
T PRK08363 260 EVREAIDKLARIRLCPNTPAQFAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEIPGISTTK-PQGAFYIFPRIEEGP 337 (398)
T ss_pred HHHHHHHHHhcccccCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecC-CCeEEEEEEEeccCC
Confidence 333221100 00123334444444444321 2234567788888999999999885 777643 23344555556542
Q ss_pred -CcchHHHHHHHhhcCceecc
Q psy10669 261 -KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 261 -~~~~~~~~~~L~~~gI~v~~ 280 (337)
.-+...+.+.|.++||.+.+
T Consensus 338 ~~~~~~~~~~~l~~~gV~v~~ 358 (398)
T PRK08363 338 WKDDKEFVLDVLHEAHVLFVH 358 (398)
T ss_pred CCCHHHHHHHHHHhCCEEEeC
Confidence 11334456777889999875
No 242
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.19 E-value=0.00016 Score=70.52 Aligned_cols=141 Identities=15% Similarity=0.123 Sum_probs=84.7
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c------CCchhhh--hHHHHHhhccCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K------TGEKILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~------~Gg~i~~--~l~~~i~~~~~p~~~g~ 197 (337)
++++.++|+++|+++++|++|. |+-. | + ..|. | ..|.++. ++.+.+........+ +
T Consensus 188 l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~-~ 265 (375)
T PRK04260 188 VKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIFTLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTF-G 265 (375)
T ss_pred HHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCC-C
Confidence 6789999999999999999995 5421 1 0 1122 2 1133332 455555443222223 3
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
.++...++....+..+. ..++.+++.++.+.+++.|.+. + +..+. .....+.+.+.. +..++.+.|.
T Consensus 266 ~~~~~~~aa~a~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~~---~~~~~~~~l~ 337 (375)
T PRK04260 266 GNKLSMAAASATLDIML---TAGFLEQALENGNYLQEQLQKALQDKETVTTVR--GLGYMIGIETTA---DLSQLVEAAR 337 (375)
T ss_pred cCHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe--ccceEEEEEecC---cHHHHHHHHH
Confidence 34455555555555543 2467788889999988888763 2 11111 134456666632 4667888888
Q ss_pred hcCceeccCc--ccchhhhh
Q psy10669 273 EIAIACNKNT--GISLAAEI 290 (337)
Q Consensus 273 ~~gI~v~~~~--girig~~~ 290 (337)
+.||.+.+.. .|||..+.
T Consensus 338 ~~Gi~v~~~~~~~lR~~~~~ 357 (375)
T PRK04260 338 DKGLIVLTAGTNVIRLLPPL 357 (375)
T ss_pred hCCCEEecCCCCEEEEcCCC
Confidence 8999986432 68887643
No 243
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.19 E-value=0.0013 Score=64.45 Aligned_cols=242 Identities=12% Similarity=0.112 Sum_probs=129.7
Q ss_pred hcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecC
Q psy10669 28 RQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPY 103 (337)
Q Consensus 28 rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~ 103 (337)
.....|+|-..++.. ++.+.+++...+......+|+. ..|. .++-+...+.+.+-+| .+.+ .+|..+
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~~~---~~I~it 98 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHGT---LDFREAAAQWYEQRFGLAVDPE---TEVLPL 98 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCCC---HHHHHHHHHHHHHhhCCcCCCc---CeEEEC
Confidence 344567777777654 7888888876543210111111 1222 2232111123333334 3331 148888
Q ss_pred CCc-hhHHHHHHhhCCc-----------------------------------------cc-----ccccEEEEcCccc--
Q psy10669 104 SGS-PANFAVCEKALPT-----------------------------------------NN-----ARFDFLSSGTTCY-- 134 (337)
Q Consensus 104 Sgt-~AN~~v~~aLl~~-----------------------------------------~~-----a~pklII~~~S~~-- 134 (337)
+|+ +|...++.+++++ ++ .++|+|++..-.+
T Consensus 99 ~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPT 178 (388)
T PRK07366 99 IGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPT 178 (388)
T ss_pred CCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCC
Confidence 885 6776667777654 00 1267777753344
Q ss_pred ccccChHHHH---HHhhhcCCeEEEecccc----ccc------cc--------eeeeec-c-------CCchhhh--hHH
Q psy10669 135 SRCLDYARFR---QICDETDSIMFADMSHI----SGL------IA--------GVKGVT-K-------TGEKILY--DYE 183 (337)
Q Consensus 135 ~~~~d~~~l~---eia~~~ga~l~vD~AH~----~Gl------i~--------g~~~T~-~-------~Gg~i~~--~l~ 183 (337)
+...+.+++. ++|+++|++|++|+++. .|- .. .+.+|. | +-|+++. ++.
T Consensus 179 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li 258 (388)
T PRK07366 179 TAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLI 258 (388)
T ss_pred CccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHH
Confidence 4666666655 57889999999999864 121 11 112332 2 2366665 466
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-Cc
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-KL 262 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-~~ 262 (337)
+.+.....+...+++.... .+...++.+- ....++.++.+.++-+.+.+.|.+.|+.+.. ...+.-+++++... +.
T Consensus 259 ~~l~~~~~~~~~~~~~~~~-~~a~~~l~~~-~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~~~~~~~~ 335 (388)
T PRK07366 259 QALRQVKAVVDFNQYRGIL-NGAIAALTGP-QATVQQTVQIFRQRRDAFINALHQIGWPVPL-PEATMYVWAKLPEPWQG 335 (388)
T ss_pred HHHHHHHhhcccCCCHHHH-HHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeeEEEEEECCcccCC
Confidence 6555432222222222122 2222233211 2234667788888888899999988886543 23455667877642 11
Q ss_pred chHHHHH-HHhhcCceeccC
Q psy10669 263 TGSKVEL-VLEEIAIACNKN 281 (337)
Q Consensus 263 ~~~~~~~-~L~~~gI~v~~~ 281 (337)
+..++.. .+++.||.+.+-
T Consensus 336 ~~~~~~~~l~~~~gv~v~pg 355 (388)
T PRK07366 336 NSVEFCTQLVAQTGVAASPG 355 (388)
T ss_pred CHHHHHHHHHHhCCEEEeCc
Confidence 3455544 457789998863
No 244
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.18 E-value=1.6e-05 Score=79.41 Aligned_cols=143 Identities=14% Similarity=0.188 Sum_probs=92.8
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc--e---------e----eeecc--CCchh-hh------hHHHHHhhc-----c
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA--G---------V----KGVTK--TGEKI-LY------DYEEKINNA-----V 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~----~~T~~--~Gg~i-~~------~l~~~i~~~-----~ 190 (337)
+++++++|+++|++||+|+.| .|+ + | + ...+| .||++ ++ ++.+.+.+. .
T Consensus 230 l~~l~~lc~~~g~llI~DEv~-tG~-GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~ 307 (429)
T PRK06173 230 LVKARELCDQYGVLLIFDEIA-TGF-GRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFM 307 (429)
T ss_pred HHHHHHHHHHcCCeEEecchh-cCC-CcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccc
Confidence 446889999999999999999 774 4 1 1 11123 26765 22 344444321 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCCcchHHHH
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~ 268 (337)
+..++ +.|+...|+...+++.+.+ + ...+++.++.++|.+.|++. +++.+. --...+++.|.++... ....+.
T Consensus 308 ~~~T~-~g~p~~~aaa~a~l~~i~~-~--~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~-~~~~i~ 382 (429)
T PRK06173 308 HGPTF-MANPLACAIAAESIRLLLE-S--PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV-NMATLQ 382 (429)
T ss_pred cCCCC-CcCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc-cHHHHH
Confidence 11222 3567777777777766643 2 45889999999999999864 555442 1146888889887643 456778
Q ss_pred HHHhhcCceeccC-cccchhhh
Q psy10669 269 LVLEEIAIACNKN-TGISLAAE 289 (337)
Q Consensus 269 ~~L~~~gI~v~~~-~girig~~ 289 (337)
+.|.+.||.+... ..|||.-|
T Consensus 383 ~~l~e~Gi~v~~~g~~l~~~Pp 404 (429)
T PRK06173 383 PRFVEHGIWVRPFGKLVYIMPP 404 (429)
T ss_pred HHHHHCCeEEEecCCEEEEeCC
Confidence 8888889999764 26666544
No 245
>PRK12403 putative aminotransferase; Provisional
Probab=98.18 E-value=7.2e-05 Score=75.39 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=64.4
Q ss_pred EEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc------h
Q psy10669 126 FLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE------K 177 (337)
Q Consensus 126 lII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg------~ 177 (337)
.||+. .++++. .+ ++.|+++|+++|++||+|+.|+ .|=.+ | +...+| .|| +
T Consensus 225 avI~E-pv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~ 303 (460)
T PRK12403 225 GFVAE-PFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGL 303 (460)
T ss_pred EEEEc-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEE
Confidence 45554 466544 34 6678899999999999999994 33233 1 111122 234 3
Q ss_pred hhh-hHHHHHhhc--c--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHHHh
Q psy10669 178 ILY-DYEEKINNA--V--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK-ANASHLSDEMIK 238 (337)
Q Consensus 178 i~~-~l~~~i~~~--~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~-~na~~l~~~L~~ 238 (337)
+.. ++.+.+... . +..++ +.|+...|+..+++..+.+ +...+++. ++.++|.+.|++
T Consensus 304 v~~~~i~~~~~~~~~~~~~~~T~-~gnPl~~Aaala~L~~i~~---~~l~~~~~~~~g~~l~~~L~~ 366 (460)
T PRK12403 304 VLSKRIAEALVEQGGVFAHGLTY-SGHPVAAAVAIANLKALRD---EGVVTRVKDDTGPYLQRCLRE 366 (460)
T ss_pred EECHHHHHHHhcCCCccccCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 333 455554321 1 12223 3566666666666666532 24678886 889999998875
No 246
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.18 E-value=0.00019 Score=69.37 Aligned_cols=191 Identities=15% Similarity=0.130 Sum_probs=117.8
Q ss_pred HHHHHhhcCCCCCCCcceeecCCCch-hHHHHHHhhCCc---------------------------c-----cc-cc-cE
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSGSP-ANFAVCEKALPT---------------------------N-----NA-RF-DF 126 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~-AN~~v~~aLl~~---------------------------~-----~a-~p-kl 126 (337)
++.+++.+|...+ -+|..++|++ +... +..++++ . .. +. .+
T Consensus 59 ~~~ia~~~~~~~~---~~I~i~~Gs~e~i~~-l~~~~~~g~v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~~~~v 134 (339)
T PRK06959 59 AACAARYYGAPDA---AHVLPVAGSQAAIRA-LPALLPRGRVGIAPLAYSEYAPAFARHGHRVVPLDEAADTLPAALTHL 134 (339)
T ss_pred HHHHHHHhCCCCc---ccEEECcCHHHHHHH-HHHhcCCCeEEEcCCCcHHHHHHHHHCCCEEEeecccchhccccCCEE
Confidence 4678899999643 2588889964 5433 3445543 0 00 12 45
Q ss_pred EEEcCcc-cccccChHHHHHHh---hhcCCeEEEecccccccc-----c-------eeeeec-c----CC---chhhh--
Q psy10669 127 LSSGTTC-YSRCLDYARFRQIC---DETDSIMFADMSHISGLI-----A-------GVKGVT-K----TG---EKILY-- 180 (337)
Q Consensus 127 II~~~S~-~~~~~d~~~l~eia---~~~ga~l~vD~AH~~Gli-----~-------g~~~T~-~----~G---g~i~~-- 180 (337)
+++++++ -+...+.+++.+++ .+++.++++|+++.--.. . .+..|. | .| |++++
T Consensus 135 ~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~ 214 (339)
T PRK06959 135 IVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP 214 (339)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCH
Confidence 6666644 25888888888764 467999999999763211 0 123333 2 13 77766
Q ss_pred hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC
Q psy10669 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN 260 (337)
Q Consensus 181 ~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~ 260 (337)
++.+.+.....|.. .+.+..++...++.. ....++.++++.++-+++.+.|.+.|+++.. ..-.+++++.
T Consensus 215 ~li~~l~~~~~~~~---vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~---~~~f~~~~~~-- 284 (339)
T PRK06959 215 ALLAALRDALGAWT---VSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAHGFAVHA---TPLFSWTDDP-- 284 (339)
T ss_pred HHHHHHHHhcCCCC---CcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCCccC---cceEEEEeCC--
Confidence 57777776544432 233444444444432 1223566788888899999999999988753 2334456543
Q ss_pred CcchHHHHHHHhhcCceeccCc---ccchhh
Q psy10669 261 KLTGSKVELVLEEIAIACNKNT---GISLAA 288 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~~~---girig~ 288 (337)
+..++.+.|.+.||.++... .|||+.
T Consensus 285 --~~~~l~~~l~~~GI~vr~~~~~~~lRisi 313 (339)
T PRK06959 285 --RAAALHAALARRGIWTRYFAPPPSVRFGL 313 (339)
T ss_pred --CHHHHHHHHHhCCeEEEECCCCCeEEEEC
Confidence 45678888888899997532 688863
No 247
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.18 E-value=0.00037 Score=68.77 Aligned_cols=198 Identities=16% Similarity=0.138 Sum_probs=116.2
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhh---CC
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKA---LP 118 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aL---l~ 118 (337)
+|.|.+|+...+.+-.+.|.|. ++|..+-+.+.+.+..-+ -|+| +|||.|++.++--- .+
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e-----~vrfvnSGTEAtmsAiRlARa~Tg 134 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIE-----KVRFVNSGTEATMSAIRLARAYTG 134 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCccc-----EEEEecchhHHHHHHHHHHHHhhC
Confidence 8999999988766543333332 345444578888888732 2666 78899988765432 11
Q ss_pred c-------------------------------------------------------ccc--c----ccEEEEc--Ccccc
Q psy10669 119 T-------------------------------------------------------NNA--R----FDFLSSG--TTCYS 135 (337)
Q Consensus 119 ~-------------------------------------------------------~~a--~----pklII~~--~S~~~ 135 (337)
+ +.+ + -..||+. .++.+
T Consensus 135 R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g 214 (432)
T COG0001 135 RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMG 214 (432)
T ss_pred CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCC
Confidence 0 101 1 2467776 34555
Q ss_pred cccChH----HHHHHhhhcCCeEEEecccccccc--ce------e---eee-cc--CCchhhh------hHHHHHhhc--
Q psy10669 136 RCLDYA----RFRQICDETDSIMFADMSHISGLI--AG------V---KGV-TK--TGEKILY------DYEEKINNA-- 189 (337)
Q Consensus 136 ~~~d~~----~l~eia~~~ga~l~vD~AH~~Gli--~g------~---~~T-~~--~Gg~i~~------~l~~~i~~~-- 189 (337)
+..|-+ .|++||+++|++||.|+-++.=-+ +| + .+| +| -||+=++ ++.+.+.+.
T Consensus 215 ~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~ 294 (432)
T COG0001 215 VVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGP 294 (432)
T ss_pred CCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCC
Confidence 555544 588999999999999999763111 11 1 112 23 2444332 566655544
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCCeEEEEEecC
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~h~v~V~~~~ 259 (337)
+|..-+=+-|+..++|-.+++.++.+.+ ...+++.+.++.|++.|++ .|+++... .-..++.|-+..
T Consensus 295 vyqaGT~sgnplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~-~~gsm~~i~F~~ 365 (432)
T COG0001 295 VYQAGTLSGNPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLTVN-RVGSMFGIFFTE 365 (432)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-eecceEEEEecC
Confidence 2322233457778888888888886421 2456666777777776665 67776532 122345555554
No 248
>PRK09148 aminotransferase; Validated
Probab=98.17 E-value=0.00079 Score=66.51 Aligned_cols=162 Identities=11% Similarity=0.042 Sum_probs=91.3
Q ss_pred ccEEEEc-Ccc-cccccChHH---HHHHhhhcCCeEEEeccccccc--------cc---------eeeeec-c-------
Q psy10669 124 FDFLSSG-TTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGL--------IA---------GVKGVT-K------- 173 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gl--------i~---------g~~~T~-~------- 173 (337)
+++|++. +.+ .+...+.++ |.++|+++|+++++|+++.--. +. .+..|. |
T Consensus 166 ~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 166 PIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 5666665 333 346777654 5577899999999999975211 10 012232 2
Q ss_pred CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 174 TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 174 ~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
+-|+++. ++.+.+..... .+..+++.+...++...+..- ....+..++++.++.+.+.+.|.+.|+.+..+ ..+-
T Consensus 246 R~G~~v~~~~~i~~l~~~~~-~~~~~~~~~~q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~ 322 (405)
T PRK09148 246 RMGFAVGNERLIAALTRVKS-YLDYGAFTPIQVAATAALNGP-QDCIAEMRELYKKRRDVLVESFGRAGWDIPPP-AASM 322 (405)
T ss_pred heeeeeCCHHHHHHHHHHHH-HhccCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-CeeE
Confidence 2267765 56665554321 111122333333333333221 12335667788888899999999988875432 3344
Q ss_pred EEEEEecCC--CcchHHHHHH-HhhcCceeccCc--------ccchhh
Q psy10669 252 LILIDLRKN--KLTGSKVELV-LEEIAIACNKNT--------GISLAA 288 (337)
Q Consensus 252 ~v~V~~~~~--~~~~~~~~~~-L~~~gI~v~~~~--------girig~ 288 (337)
-+++.+... ..+..++... |++.||.+.+-. .+||+.
T Consensus 323 f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~ 370 (405)
T PRK09148 323 FAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL 370 (405)
T ss_pred EEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe
Confidence 567776532 1233455554 557899988632 477764
No 249
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.17 E-value=0.00021 Score=77.83 Aligned_cols=156 Identities=14% Similarity=0.211 Sum_probs=102.8
Q ss_pred CcccccccChHHHHHHhhhcCCeEEEeccccccccc-------e---eeeecc-----CC------chhhh--hHHHHHh
Q psy10669 131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------G---VKGVTK-----TG------EKILY--DYEEKIN 187 (337)
Q Consensus 131 ~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T~~-----~G------g~i~~--~l~~~i~ 187 (337)
++.++...|+++|.++|+++|++++| +||..|+.. | ++++++ .| ||+.+ ++..++-
T Consensus 243 P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~P 321 (993)
T PLN02414 243 PATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMP 321 (993)
T ss_pred CCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCC
Confidence 45578889999999999999999999 888877766 1 344442 22 66643 3433211
Q ss_pred h---------ccCCCC--------------CCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 188 N---------AVFPSL--------------QGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 188 ~---------~~~p~~--------------~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
. .-.|.. .+|.|.....++.+++.-+ .....++.++++..++.+|+++|.+.
T Consensus 322 griVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~ 401 (993)
T PLN02414 322 GRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL 401 (993)
T ss_pred CcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 001111 4678885555555554322 22344677899999999999999999
Q ss_pred CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhhHh
Q psy10669 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEIQA 292 (337)
Q Consensus 240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~~t 292 (337)
|+++.+. ...+++.+.+. +..++.++|.+.||.+.... .+|+...+.+
T Consensus 402 G~~~~~~-~~f~~vt~~~~----~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~ 451 (993)
T PLN02414 402 GFQVQSL-PFFDTVKVKCS----DADAIADAAAKVGINLRVVDANTVTVSFDETT 451 (993)
T ss_pred CCccCCC-CCcCeEEEecC----CHHHHHHHHHHCCCeeEEecCCeEEEEeeccC
Confidence 9998753 33446666653 34778888998999886543 5777655554
No 250
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.17 E-value=0.00026 Score=69.20 Aligned_cols=162 Identities=14% Similarity=0.150 Sum_probs=94.1
Q ss_pred ccEEEEcC-----cccc-cccChHHHHHHhhhcCCeEEEeccccc-cccc--------e----eeeec-------cCCch
Q psy10669 124 FDFLSSGT-----TCYS-RCLDYARFRQICDETDSIMFADMSHIS-GLIA--------G----VKGVT-------KTGEK 177 (337)
Q Consensus 124 pklII~~~-----S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g----~~~T~-------~~Gg~ 177 (337)
+..||+.+ .+.+ -..=++.++++|+++|++||+|+=|+- |=-| | +..+. |-|++
T Consensus 185 taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~PigA~ 264 (404)
T COG4992 185 TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGFPIGAM 264 (404)
T ss_pred eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCCccceee
Confidence 45666642 2222 222345688999999999999999863 2111 1 12222 23333
Q ss_pred hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEE
Q psy10669 178 ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLI 253 (337)
Q Consensus 178 i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v 253 (337)
+.. ++.+.+.+.....++| -|+-+.|+..+++..+.+ +...+++.+...+|.++|.+ ..|.++.. -...-++
T Consensus 265 la~~~~~~~~~~G~HgSTfG-GNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmi 340 (404)
T COG4992 265 LATEEIASAFTPGDHGSTFG-GNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMI 340 (404)
T ss_pred EEchhhhhcCCCCcccCCCC-cCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEE
Confidence 333 2334444444333343 355566655566666654 35677888888899999988 34443321 1223344
Q ss_pred EEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhh
Q psy10669 254 LIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEI 290 (337)
Q Consensus 254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~ 290 (337)
=+.+.... .+..+.+.|.+.|+.++.-. -||+-=|.
T Consensus 341 Giel~~~~-~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL 378 (404)
T COG4992 341 GIELKEPY-RARDIVRALREEGVLVLPAGPNVIRFLPPL 378 (404)
T ss_pred EEEecCcc-cHHHHHHHHHHCCeEEecCCCCeEEecCCc
Confidence 45555432 46778888888899988644 77776443
No 251
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.16 E-value=0.00019 Score=69.90 Aligned_cols=187 Identities=11% Similarity=0.079 Sum_probs=112.1
Q ss_pred HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------------------- 119 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------------------- 119 (337)
|+.+++++|++. .+|.+++| +++...++.+++.+
T Consensus 65 r~~ia~~~~~~~----~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 140 (364)
T PRK04781 65 RSALAALYGCAP----EQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD 140 (364)
T ss_pred HHHHHHHhCcCh----HHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence 457788889876 37989999 56766666777532
Q ss_pred --cc---c---cccEEEEcCccc--ccccChHHHHHHhhh--cCCeEEEecccc--cc------ccc-----eeeeec-c
Q psy10669 120 --NN---A---RFDFLSSGTTCY--SRCLDYARFRQICDE--TDSIMFADMSHI--SG------LIA-----GVKGVT-K 173 (337)
Q Consensus 120 --~~---a---~pklII~~~S~~--~~~~d~~~l~eia~~--~ga~l~vD~AH~--~G------li~-----g~~~T~-~ 173 (337)
++ . ++++|++..-++ +...|.+++.++++. .++++++|+++. .. ++. .+..|. |
T Consensus 141 ~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK 220 (364)
T PRK04781 141 VPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSK 220 (364)
T ss_pred HHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChh
Confidence 00 0 257777753233 588899888887764 378999999974 11 111 123333 2
Q ss_pred -------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-
Q psy10669 174 -------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH- 242 (337)
Q Consensus 174 -------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~- 242 (337)
+-|+++. ++.+.++....|. + .+.+...+...++..-......+..+++.++-+.+.+.|++. |+.
T Consensus 221 ~~gl~GlRvGy~v~~~~l~~~l~~~~~~~--~-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 297 (364)
T PRK04781 221 AHALAAARIGSLIANAELIAVLRRCQAPY--P-VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRR 297 (364)
T ss_pred hcccccceeeeeeCCHHHHHHHHhccCCC--C-CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 1266665 6777777654443 2 222333322222221000123455567778888899999886 764
Q ss_pred EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 243 VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 243 v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
+.. ++.--+++.+. +..++.+.|.+.||.+.+.
T Consensus 298 ~~p--~~g~f~~~~~~----~~~~~~~~l~~~gI~v~~~ 330 (364)
T PRK04781 298 VYP--SQGNFLLVRFD----DAEAAFQALLAAGVVVRDQ 330 (364)
T ss_pred ECC--CCCcEEEEEcC----CHHHHHHHHHHCCeEEeeC
Confidence 443 33334667764 3567788888899999764
No 252
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.16 E-value=7.7e-05 Score=70.62 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=156.8
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH-HHHhhCCc--
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA-VCEKALPT-- 119 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~-v~~aLl~~-- 119 (337)
++.+.....+.....++++..+++.-.-..+.+-=|.+. .+++-+.|+... .|..+.++..|+. ++.+.+++
T Consensus 44 p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lg-dklApLiGA~~~----Evvv~dtts~nl~k~L~aalr~~~ 118 (407)
T COG3844 44 PRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLG-DKLAPLIGARAG----EVVVTDTTSINLFKVLAAALRPQE 118 (407)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHH-HHhhhhhcCCCC----ceEEeCCcchHHHHHHHHHhccCC
Confidence 667777777777788888877777654444444333333 588999999873 4555666666632 33333332
Q ss_pred --------------------------------cc---------c-c--ccEEEEcCccc--ccccChHHHHHHhhhcCCe
Q psy10669 120 --------------------------------NN---------A-R--FDFLSSGTTCY--SRCLDYARFRQICDETDSI 153 (337)
Q Consensus 120 --------------------------------~~---------a-~--pklII~~~S~~--~~~~d~~~l~eia~~~ga~ 153 (337)
+. + . ..+|.+++-+| +...|+.+|.++|+++|++
T Consensus 119 ~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~gal 198 (407)
T COG3844 119 GRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGAL 198 (407)
T ss_pred CceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCce
Confidence 00 0 0 24666666555 6889999999999999999
Q ss_pred EEEeccccccccc------e----eeeecc--------CCchhhh-hHHH----------------HHh------hccCC
Q psy10669 154 MFADMSHISGLIA------G----VKGVTK--------TGEKILY-DYEE----------------KIN------NAVFP 192 (337)
Q Consensus 154 l~vD~AH~~Gli~------g----~~~T~~--------~Gg~i~~-~l~~----------------~i~------~~~~p 192 (337)
+..|-||++|.++ | +-+|+| -+|+.+. +..+ .+. +.+.-
T Consensus 199 v~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~r 278 (407)
T COG3844 199 VGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARR 278 (407)
T ss_pred EEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccc
Confidence 9999999999998 2 233332 1122221 1111 111 11223
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCC----CCCeEEEEEecCCCcch
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGG----TDVHLILIDLRKNKLTG 264 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~----t~~h~v~V~~~~~~~~~ 264 (337)
+.+|++..-.++++-.++.-.-.....+.+++-+..+.+|-+.+.. .++++.+.- --+| |++... .+
T Consensus 279 f~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsq---vS~~hp--~~ 353 (407)
T COG3844 279 FLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQ---VSLYHP--HG 353 (407)
T ss_pred eeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccce---eeEecC--cH
Confidence 3478999999999888876665556678899999999999887776 378888731 2244 444443 58
Q ss_pred HHHHHHHhhcCceeccCc--ccchh-hhhHh
Q psy10669 265 SKVELVLEEIAIACNKNT--GISLA-AEIQA 292 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~--girig-~~~~t 292 (337)
..+.+.|.++||...--. -||+| ||.-+
T Consensus 354 ~~V~qaLi~rGVigD~R~P~vlRfgftPlY~ 384 (407)
T COG3844 354 YQVMQALIDRGVIGDFREPDVLRFGFTPLYV 384 (407)
T ss_pred HHHHHHHHHcCccccccCCCeeeecCcccee
Confidence 889999999999865322 68886 34444
No 253
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.15 E-value=0.00079 Score=66.24 Aligned_cols=253 Identities=13% Similarity=0.145 Sum_probs=134.8
Q ss_pred hhhcHHHHHHHHHHHhh---cccceeeeccCC-----C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669 12 AQTDPELYSLIKKEKHR---QINGIELIASEN-----F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ 82 (337)
Q Consensus 12 ~~~d~~~~~~~~~e~~r---q~~~i~l~asen-----~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~ 82 (337)
...|| +.+++...+.. .++.++|-..+. + .++.+++++...+......+|+- ..|. .++ +
T Consensus 11 ~~~~~-~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~l----r 79 (401)
T TIGR01264 11 NTVNP-IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAP---TVGA---LSA----R 79 (401)
T ss_pred hhhhH-HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCC---CCCC---HHH----H
Confidence 34455 55555443332 234577665442 2 48889998876544321111110 1122 223 2
Q ss_pred HHHHhhcC-----CCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------
Q psy10669 83 QRSLKAFN-----LDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------- 119 (337)
Q Consensus 83 ~~~a~lfg-----~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------- 119 (337)
+.++++++ .+. -+|..++| +++...++.+++++
T Consensus 80 ~aia~~~~~~~~~~~~----~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~ 155 (401)
T TIGR01264 80 EAIASYYHNPDGPIEA----DDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWE 155 (401)
T ss_pred HHHHHHHhhcCCCCCH----HHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCC
Confidence 45556665 333 24777777 67877777888653
Q ss_pred ------ccc---cccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccc----c--ccc----------eee
Q psy10669 120 ------NNA---RFDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHIS----G--LIA----------GVK 169 (337)
Q Consensus 120 ------~~a---~pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G--li~----------g~~ 169 (337)
+.+ ++++|++..-.+ +...+ +++|.++|+++|+++++|++..- | ... .++
T Consensus 156 ~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~ 235 (401)
T TIGR01264 156 IDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSC 235 (401)
T ss_pred CCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEE
Confidence 000 156777653343 34544 55677888999999999999752 2 111 112
Q ss_pred eec-c-------CCchhhh--------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q psy10669 170 GVT-K-------TGEKILY--------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS 233 (337)
Q Consensus 170 ~T~-~-------~Gg~i~~--------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~ 233 (337)
.|. | +-|+++. ++.+.+.....+ ..+++.....++...+.+-.+...++.++++.++-+.+.
T Consensus 236 ~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~ 313 (401)
T TIGR01264 236 GGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR--ILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCY 313 (401)
T ss_pred ccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhc--cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 332 2 1255543 122333332111 123344455555555543112334667778888888899
Q ss_pred HHHHhC-CCEEecCCCCCeEEEEEecCC----CcchHHHHHH-HhhcCceeccCc
Q psy10669 234 DEMIKR-GYHVVTGGTDVHLILIDLRKN----KLTGSKVELV-LEEIAIACNKNT 282 (337)
Q Consensus 234 ~~L~~~-G~~v~~~~t~~h~v~V~~~~~----~~~~~~~~~~-L~~~gI~v~~~~ 282 (337)
+.|.+. |+.+... ...--+++++... ..+..++.+. +++.||.+.+..
T Consensus 314 ~~L~~~~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~ 367 (401)
T TIGR01264 314 GALAAVPGLRPVMP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGS 367 (401)
T ss_pred HHHHhCCCCcccCC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCch
Confidence 999886 7664322 3455667776531 1234555555 467899987643
No 254
>PLN02656 tyrosine transaminase
Probab=98.14 E-value=0.00042 Score=68.57 Aligned_cols=240 Identities=14% Similarity=0.047 Sum_probs=130.9
Q ss_pred hhcccceeeeccCCC------CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----C--CCCC
Q psy10669 27 HRQINGIELIASENF------TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----N--LDPE 94 (337)
Q Consensus 27 ~rq~~~i~l~asen~------~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g--~~~~ 94 (337)
...+.-|+|-..+.- .++.+++++...+......+|+- ..|. .++. +.+++++ | .+.
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr----~~ia~~~~~~~g~~~~~- 96 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVGL---PQAR----RAIAEYLSRDLPYKLSL- 96 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHH----HHHHHHHHHhcCCCCCc-
Confidence 345567888777763 37899998876554321112211 1122 2332 2334444 3 233
Q ss_pred CCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------cc-----ccccEE
Q psy10669 95 QWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------NN-----ARFDFL 127 (337)
Q Consensus 95 ~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~-----a~pklI 127 (337)
.+|.+++| ++|...++.+++++ .+ .++++|
T Consensus 97 ---~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (409)
T PLN02656 97 ---DDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVAL 173 (409)
T ss_pred ---ccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEE
Confidence 25777777 67777777777653 00 014544
Q ss_pred EE-cCccc-cccc---ChHHHHHHhhhcCCeEEEeccccc----cc--cc----------eeeeec-c-------CCchh
Q psy10669 128 SS-GTTCY-SRCL---DYARFRQICDETDSIMFADMSHIS----GL--IA----------GVKGVT-K-------TGEKI 178 (337)
Q Consensus 128 I~-~~S~~-~~~~---d~~~l~eia~~~ga~l~vD~AH~~----Gl--i~----------g~~~T~-~-------~Gg~i 178 (337)
++ .+++- +... ++++|.++|+++|+++++|+++.- |- .. .+.++. | +-|++
T Consensus 174 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~ 253 (409)
T PLN02656 174 VIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWF 253 (409)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEE
Confidence 44 45432 3443 566777889999999999999751 10 11 011222 2 22555
Q ss_pred hh----------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCC
Q psy10669 179 LY----------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGG 247 (337)
Q Consensus 179 ~~----------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~ 247 (337)
+. ++.+++.....+ .++++....++++.++.+-.+..+++.++++.++.+.+.+.|.+.+ +......
T Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p 331 (409)
T PLN02656 254 VTTDPSGSFRDPKIVERIKKYFDI--LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKP 331 (409)
T ss_pred EEeCcccccccHHHHHHHHHHHhh--hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCC
Confidence 43 355555443222 2334555666665655431122356677788888888989988753 3221122
Q ss_pred CCCeEEEEEecCC---Cc-ch-HHHHHHHhhcCceeccCc
Q psy10669 248 TDVHLILIDLRKN---KL-TG-SKVELVLEEIAIACNKNT 282 (337)
Q Consensus 248 t~~h~v~V~~~~~---~~-~~-~~~~~~L~~~gI~v~~~~ 282 (337)
..+.-+++++... +. +. ..+.+.|.+.||.+.+-.
T Consensus 332 ~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~ 371 (409)
T PLN02656 332 EGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGT 371 (409)
T ss_pred CeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecch
Confidence 3345677777421 11 23 345677788899988743
No 255
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.12 E-value=7e-05 Score=74.77 Aligned_cols=148 Identities=17% Similarity=0.139 Sum_probs=93.5
Q ss_pred ccChHHHHHHhhhcCCeEEEeccccccccc--e-------------eeeecc--CCchh-hh------hHHHHHhhcc--
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLIA--G-------------VKGVTK--TGEKI-LY------DYEEKINNAV-- 190 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g-------------~~~T~~--~Gg~i-~~------~l~~~i~~~~-- 190 (337)
..++++|+++|+++|++||+|+.| .|+ + | +...+| .||++ ++ ++.+.+++..
T Consensus 228 ~~~l~~l~~lc~~~~~llI~DEv~-tG~-Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~ 305 (427)
T TIGR00508 228 PTYLKRVQALCKQYDILLIADEIA-TGF-GRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAG 305 (427)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccc-cCC-CcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCC
Confidence 355667889999999999999999 664 3 1 111223 26754 22 4555555321
Q ss_pred ---CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE-Eec-CCCCCeEEEEEecCCCcchH
Q psy10669 191 ---FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH-VVT-GGTDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 191 ---~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~-v~~-~~t~~h~v~V~~~~~~~~~~ 265 (337)
+...++ .++..+++...++..+.+ .+..+++.++.++|.+.|++.+.. ... .-....++.|.+.... ...
T Consensus 306 ~~~~~~T~~-g~p~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~-~~~ 380 (427)
T TIGR00508 306 CFMHGPTFM-GNPLACAVAEASLAILLE---GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV-NVE 380 (427)
T ss_pred ccccCCCCC-cCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc-CHH
Confidence 112232 366677776667766543 245799999999999999886432 111 1124677888886543 466
Q ss_pred HHHHHHhhcCceeccCc-ccchhhhhH
Q psy10669 266 KVELVLEEIAIACNKNT-GISLAAEIQ 291 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~~~-girig~~~~ 291 (337)
.+.+.|.+.||.+.... .+|+..+..
T Consensus 381 ~~~~~l~~~Gv~~~~~~~~l~~~ppl~ 407 (427)
T TIGR00508 381 ELQKKFVEQGVWIRPFGKLIYVMPPYI 407 (427)
T ss_pred HHHHHHHHCCeEEEecCCEEEEECCCC
Confidence 78888888899997542 566654433
No 256
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.10 E-value=0.00029 Score=67.61 Aligned_cols=155 Identities=11% Similarity=0.056 Sum_probs=93.3
Q ss_pred cc-EEEEcCcc-cccccChHHHHHH---hhhcCCeEEEecccccccc-----c-------eeeeecc-----CC---chh
Q psy10669 124 FD-FLSSGTTC-YSRCLDYARFRQI---CDETDSIMFADMSHISGLI-----A-------GVKGVTK-----TG---EKI 178 (337)
Q Consensus 124 pk-lII~~~S~-~~~~~d~~~l~ei---a~~~ga~l~vD~AH~~Gli-----~-------g~~~T~~-----~G---g~i 178 (337)
+| ++++++++ -+...+.+++.+| |+++|+++++|++..-..- . .+.+|.. .| |++
T Consensus 125 ~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~ 204 (330)
T PRK05664 125 LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFV 204 (330)
T ss_pred CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEE
Confidence 45 46666754 2477777766654 5788999999999742211 1 1233432 23 777
Q ss_pred hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669 179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID 256 (337)
Q Consensus 179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~ 256 (337)
++ ++.+.+.....+... +.+...+...++.+. ...+..++++.++.+.+.+.|.+.|++..+ +..-.+++.
T Consensus 205 v~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~~f~~~~ 277 (330)
T PRK05664 205 LAEPALLRALAELLGPWTV---SGPTRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRHGLTPAG--GCALFQWVR 277 (330)
T ss_pred EeCHHHHHHHHHhcCCCCC---CHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHCCCcccC--CcceEEEEe
Confidence 76 577766655443322 233333444444321 223566788888999999999999876532 222234444
Q ss_pred ecCCCcchHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669 257 LRKNKLTGSKVELVLEEIAIACNKNT---GISLAAE 289 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~~gI~v~~~~---girig~~ 289 (337)
+. +..++.+.|.+.||.+.... .|||+..
T Consensus 278 ~~----~~~~~~~~l~~~gi~v~~f~~~~~iRis~~ 309 (330)
T PRK05664 278 TE----DAAALHEFLARRGILTRLFEQPASLRFGLP 309 (330)
T ss_pred cC----CHHHHHHHHHHCCeEEEECCCCCeEEEECC
Confidence 32 56788888999999996422 6777643
No 257
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.10 E-value=6.5e-05 Score=75.17 Aligned_cols=151 Identities=11% Similarity=0.046 Sum_probs=86.1
Q ss_pred ccEEEEcCcccccccChH-------HHHHHhhhcCCeEEEeccccccc-cc--------ee----eeecc--CCc----h
Q psy10669 124 FDFLSSGTTCYSRCLDYA-------RFRQICDETDSIMFADMSHISGL-IA--------GV----KGVTK--TGE----K 177 (337)
Q Consensus 124 pklII~~~S~~~~~~d~~-------~l~eia~~~ga~l~vD~AH~~Gl-i~--------g~----~~T~~--~Gg----~ 177 (337)
...||+. ..+++.+++. +|+++|+++|++||+|+.| .|+ .+ ++ ...+| .|| .
T Consensus 202 ~aavI~E-pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~R~G~~ga~~~~gv~PDi~~~gK~lggG~p~~a 279 (433)
T PRK00615 202 VAGVIFE-PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGFRVAQGGAAAIYHVKPDITVYGKILGGGLPAAA 279 (433)
T ss_pred eEEEEEC-CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccccccHhHHHHhcCCCCCeEEEcccccCCcceee
Confidence 3567765 5888776533 6889999999999999999 477 33 11 11122 123 2
Q ss_pred hhh--hHHHHHhhccCCCCCCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCC
Q psy10669 178 ILY--DYEEKINNAVFPSLQGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTD 249 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~ 249 (337)
+++ ++.+.+.+.-...+.+| .++...|+...++..+.+ ....+++.++.++|.++|++ .|+++.... .
T Consensus 280 v~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~ 355 (433)
T PRK00615 280 VVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-Y 355 (433)
T ss_pred eeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-e
Confidence 232 46565542111112223 466666666666665533 24688888999999777655 566643211 1
Q ss_pred CeEEEEEecCCCc------------chHHHHHHHhhcCceecc
Q psy10669 250 VHLILIDLRKNKL------------TGSKVELVLEEIAIACNK 280 (337)
Q Consensus 250 ~h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~ 280 (337)
.-+.-|.+..... ....+...|.+.||++.+
T Consensus 356 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 398 (433)
T PRK00615 356 GSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSP 398 (433)
T ss_pred ceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecC
Confidence 2233333432110 123456666678999885
No 258
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.08 E-value=0.0018 Score=64.71 Aligned_cols=156 Identities=12% Similarity=0.097 Sum_probs=85.9
Q ss_pred ccEEEE-cCcc-cccccCh---HHHHHHhhhcCCeEEEeccccccccce----------------eeeec-c-------C
Q psy10669 124 FDFLSS-GTTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIAG----------------VKGVT-K-------T 174 (337)
Q Consensus 124 pklII~-~~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~-~-------~ 174 (337)
+++|++ .+++ .+...+. ++|.++|+++|+++++|+++.--...+ +.++. | +
T Consensus 191 ~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~R 270 (430)
T PLN00145 191 TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWR 270 (430)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCee
Confidence 454444 4543 2466764 456677899999999999965322110 11111 2 1
Q ss_pred Cchhhh----hH------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669 175 GEKILY----DY------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHV 243 (337)
Q Consensus 175 Gg~i~~----~l------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v 243 (337)
=|+++. ++ .+.+.... .+...++....+++..++..-.+..+++.++++.++.+.+.+.|.+. |+..
T Consensus 271 lG~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~ 348 (430)
T PLN00145 271 LGWIATCDPNGILKETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITC 348 (430)
T ss_pred EEEEEEecchhhhhhhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 255542 12 22333322 22323444454555444433112345677888888999999999884 7764
Q ss_pred ecCCCCCeEEEEEecCC---Cc-ch-HHHHHHHhhcCceeccC
Q psy10669 244 VTGGTDVHLILIDLRKN---KL-TG-SKVELVLEEIAIACNKN 281 (337)
Q Consensus 244 ~~~~t~~h~v~V~~~~~---~~-~~-~~~~~~L~~~gI~v~~~ 281 (337)
.......--++|.+... +. +. ..+.++|++.||.+.+-
T Consensus 349 ~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG 391 (430)
T PLN00145 349 PHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPG 391 (430)
T ss_pred CcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 32224455677776431 22 33 34556777789998773
No 259
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.06 E-value=0.00029 Score=69.18 Aligned_cols=216 Identities=13% Similarity=0.104 Sum_probs=128.4
Q ss_pred cCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC-c---------------------------
Q psy10669 68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP-T--------------------------- 119 (337)
Q Consensus 68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~-~--------------------------- 119 (337)
+..-++. ++-..+.+.++++|+.+...+ +-+...|||.++=+++..|++ +
T Consensus 32 HRs~~F~-~i~~e~~~~L~~l~~~~~~~~-v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g~FG~r~~~eia~~~g~~~v 109 (374)
T TIGR01365 32 HRSKLGK-EKLAEAIKKTREMLGVPADYL-IGIVPASDTGAVEMALWSMLGCRGVDVLAWESFGKGWVTDVTKQLKLPDV 109 (374)
T ss_pred cCCHHHH-HHHHHHHHHHHHHhCCCCCcE-EEEECCchHHHHHHHHHHcCCCCCCeEEEECHHHHHHHHHHHHhcCCCCc
Confidence 4433333 344456679999999753222 335557778999888899884 3
Q ss_pred --------------ccc-cccEEEE-cCcccccccChHHHHHHhhh-cCCeEEEeccccccccce------ee--eecc-
Q psy10669 120 --------------NNA-RFDFLSS-GTTCYSRCLDYARFRQICDE-TDSIMFADMSHISGLIAG------VK--GVTK- 173 (337)
Q Consensus 120 --------------~~a-~pklII~-~~S~~~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~g------~~--~T~~- 173 (337)
+.. ++.+.++ .+++-+...|++ +++++ .+++++||+.=++|-... +. ++-|
T Consensus 110 ~~l~~~~g~~~~~~~ve~~~~v~~vhnETSTGv~npv~---~i~~~~~~~lliVDavSs~g~~~l~~d~iDv~~tgsQK~ 186 (374)
T TIGR01365 110 RVLEAEYGKLPDLKKVDFKNDVVFTWNGTTSGVRVPNG---DFIPADREGLTICDATSAAFAQDLDYHKLDVVTFSWQKV 186 (374)
T ss_pred EEEcCCCCCCCCHHHcCCCCCEEEecCCCchheecccc---ccccccCCCcEEEEccchhcCCCCChhHCcEEEEechhc
Confidence 000 0123222 366666777765 44433 489999999988877661 22 3322
Q ss_pred ---CCch--hh-h-hHHHHHhh---------------------ccC-CCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHH
Q psy10669 174 ---TGEK--IL-Y-DYEEKINN---------------------AVF-PSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQA 223 (337)
Q Consensus 174 ---~Gg~--i~-~-~l~~~i~~---------------------~~~-p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~ 223 (337)
-+|+ +. . +..++.+. ... +.+.-||+.+.+-++..+++++++. ..+...+
T Consensus 187 L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~ 266 (374)
T TIGR01365 187 LGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIA 266 (374)
T ss_pred cCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 1333 32 2 22121110 001 1223366666666666667766553 4688889
Q ss_pred HHHHHHHHHHHHHHhCC-CEEecC--CCCCeE-EEEEecCCCc-----c-----hHHHHHHHhhcCceeccCc------c
Q psy10669 224 QVKANASHLSDEMIKRG-YHVVTG--GTDVHL-ILIDLRKNKL-----T-----GSKVELVLEEIAIACNKNT------G 283 (337)
Q Consensus 224 ~v~~na~~l~~~L~~~G-~~v~~~--~t~~h~-v~V~~~~~~~-----~-----~~~~~~~L~~~gI~v~~~~------g 283 (337)
+-.++++++++.+++.| +.+... ...++. +.+.+...++ + ..++.+.|.+.||.+.... .
T Consensus 267 Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~ 346 (374)
T TIGR01365 267 RADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSG 346 (374)
T ss_pred HHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCc
Confidence 99999999999999999 676642 123443 3344433333 2 6788889988898776322 7
Q ss_pred cchhh
Q psy10669 284 ISLAA 288 (337)
Q Consensus 284 irig~ 288 (337)
+|||.
T Consensus 347 fRIg~ 351 (374)
T TIGR01365 347 LRIWC 351 (374)
T ss_pred eEEec
Confidence 88874
No 260
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.05 E-value=6.8e-05 Score=74.89 Aligned_cols=145 Identities=19% Similarity=0.197 Sum_probs=91.9
Q ss_pred cChHHHHHHhhhcCCeEEEeccccccccc--e---------e----eeecc--CCchh-----h-h-hHHHHHhhc----
Q psy10669 138 LDYARFRQICDETDSIMFADMSHISGLIA--G---------V----KGVTK--TGEKI-----L-Y-DYEEKINNA---- 189 (337)
Q Consensus 138 ~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~----~~T~~--~Gg~i-----~-~-~l~~~i~~~---- 189 (337)
..+++|+++|+++|++||+|+.| .|+ + | + ...+| .||++ + . ++.+.+...
T Consensus 226 ~~L~~l~~lc~~~g~lLI~DEv~-tG~-GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~ 303 (428)
T PRK07986 226 EWLKRVRKLCDREGILLIADEIA-TGF-GRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGC 303 (428)
T ss_pred HHHHHHHHHHHHcCCEEEEeccc-cCC-ccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCc
Confidence 34678999999999999999999 775 3 1 1 11123 25654 1 2 455555432
Q ss_pred -cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCCcchHH
Q psy10669 190 -VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 190 -~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~~~~~~ 266 (337)
....+++ .|+...|+...++..+.+ + ++.+++.++.++|.+.|++. .+..++ --....++.|.+.... ....
T Consensus 304 ~~~~~T~~-g~p~~~aaa~a~L~~i~~-~--~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~-~~~~ 378 (428)
T PRK07986 304 FMHGPTFM-GNPLACAVANASLSLLES-G--DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV-NMAA 378 (428)
T ss_pred cccCCCCC-cCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc-cHHH
Confidence 1233444 466677766666766643 2 56899999999999999873 233222 0124667777776543 4566
Q ss_pred HHHHHhhcCceeccCc-ccchhhh
Q psy10669 267 VELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~~-girig~~ 289 (337)
+.+.|.+.||.+.+.. .||+.-+
T Consensus 379 ~~~~l~~~Gl~~~~~g~~i~~~Pp 402 (428)
T PRK07986 379 LQRFFVEQGVWIRPFGKLIYLMPP 402 (428)
T ss_pred HHHHHHHCCcEEEecCCEEEEeCC
Confidence 7788888899997632 5666433
No 261
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.04 E-value=0.0017 Score=62.91 Aligned_cols=222 Identities=16% Similarity=0.117 Sum_probs=128.2
Q ss_pred ceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hh
Q psy10669 32 GIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PA 108 (337)
Q Consensus 32 ~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~A 108 (337)
.+.|-..+|.. +|.+.+++...+.. ..++|. . ...+ .|+.++++++.+. -+|.+++|+ ++
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~------~-~~~~----lr~~ia~~~~~~~----~~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPD------P-DYLE----LRKRIASFEQLDL----ENVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCC------c-cHHH----HHHHHHHHhCCCh----hhEEECCCHHHH
Confidence 36776666764 88999998765321 112221 1 1122 3567788889876 379999995 67
Q ss_pred HHHHHHhhCCc------------------------------c---------cc----cccEEEEc-Ccc-cccccChHH-
Q psy10669 109 NFAVCEKALPT------------------------------N---------NA----RFDFLSSG-TTC-YSRCLDYAR- 142 (337)
Q Consensus 109 N~~v~~aLl~~------------------------------~---------~a----~pklII~~-~S~-~~~~~d~~~- 142 (337)
...++.++.+. + +. ++++|++. +.+ -+...+.++
T Consensus 84 l~~~~~~~~~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~ 163 (354)
T PRK06358 84 IFNIVKVTKPKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEM 163 (354)
T ss_pred HHHHHHHhCCCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCCCccCHHHH
Confidence 66666766322 0 00 26776554 433 246666444
Q ss_pred --HHHHhhhcCCeEEEeccccc----c-------ccc-----eeeeec-c-------CCchhhh---hHHHHHhhccCCC
Q psy10669 143 --FRQICDETDSIMFADMSHIS----G-------LIA-----GVKGVT-K-------TGEKILY---DYEEKINNAVFPS 193 (337)
Q Consensus 143 --l~eia~~~ga~l~vD~AH~~----G-------li~-----g~~~T~-~-------~Gg~i~~---~l~~~i~~~~~p~ 193 (337)
|.++|+++|+++++|++..- + .+. .+..+. | +-|+++. ++.+.+.....+
T Consensus 164 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~- 242 (354)
T PRK06358 164 KKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP- 242 (354)
T ss_pred HHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC-
Confidence 55678899999999999631 1 011 112222 1 2366543 366666654322
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
.+.+.....+...++. ...+ ++.++.+.++.+.+.+.|.+. |+.+... +..-+++.+.. ..++.+.|
T Consensus 243 --~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~f~~~~~~~----~~~~~~~l 311 (354)
T PRK06358 243 --WSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP--SVNFIFFKLEK----PIDLRKEL 311 (354)
T ss_pred --CcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--cceEEEEEcCc----hHHHHHHH
Confidence 1233333333333332 2223 566777888888899999885 7776642 33345666542 36777788
Q ss_pred hhcCceeccCc
Q psy10669 272 EEIAIACNKNT 282 (337)
Q Consensus 272 ~~~gI~v~~~~ 282 (337)
.+.||.+.+-.
T Consensus 312 ~~~gI~v~~~~ 322 (354)
T PRK06358 312 LKKGILIRSCS 322 (354)
T ss_pred HHCCeEEEECC
Confidence 88899998743
No 262
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.04 E-value=0.00052 Score=69.19 Aligned_cols=145 Identities=14% Similarity=0.226 Sum_probs=77.2
Q ss_pred hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCchh-h-----h-hHHHHHhhccCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGEKI-L-----Y-DYEEKINNAVFPSLQG 196 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg~i-~-----~-~l~~~i~~~~~p~~~g 196 (337)
+++++++|+++|++||+|+.|+ |+ .+ | +...+| .||++ + . ++.+..+.....+++
T Consensus 251 l~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~~T~- 328 (459)
T PRK06082 251 WKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGHYTH- 328 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCCCCC-
Confidence 5678999999999999999997 43 22 1 111223 24542 2 2 333322222111223
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC----cc---hHH
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK----LT---GSK 266 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~----~~---~~~ 266 (337)
+.|+...|+..+.+..+.+ ....+++.++.++|.+.|++. .+.++.. -...-++-|.+.... .+ ...
T Consensus 329 ~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~ 405 (459)
T PRK06082 329 EKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEA 405 (459)
T ss_pred CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHH
Confidence 3455555555555555432 257889999999999999872 2332220 012223344443211 01 233
Q ss_pred HHHHHhhcCceeccCc--ccchhhh
Q psy10669 267 VELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~~--girig~~ 289 (337)
+...+.+.|+.+.+.. .||+.-+
T Consensus 406 ~~~~~~~~Gvl~~~~~~~~i~~~Pp 430 (459)
T PRK06082 406 VLYRCLNNGLSFKVSQGNVIQLSPP 430 (459)
T ss_pred HHHHHHhCCCEEEecCCCEEEEeCC
Confidence 4445556799887642 5666544
No 263
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.03 E-value=0.0039 Score=61.44 Aligned_cols=155 Identities=8% Similarity=0.077 Sum_probs=85.8
Q ss_pred ccEEEEcCccc--ccccChHHHH---HHhhhcCCeEEEeccccc----cc--cc----------ee-eeec-c-------
Q psy10669 124 FDFLSSGTTCY--SRCLDYARFR---QICDETDSIMFADMSHIS----GL--IA----------GV-KGVT-K------- 173 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~~~l~---eia~~~ga~l~vD~AH~~----Gl--i~----------g~-~~T~-~------- 173 (337)
+++|+...-.+ +...+.++++ ++|+++++++++|+++.- |- .. .+ .++. |
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 45666652133 4677776544 678999999999998652 11 00 01 2222 1
Q ss_pred CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 174 TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 174 ~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
+-|+++. ++.+.+.........+++.+...++ ..++... ....++.++...++.+.+.+.|.+.|+++... ...-
T Consensus 256 RiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~g~ 332 (403)
T PRK08636 256 RVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAA-TIALDGD-QSCVEEIRETYRKRRDVLIESFANAGWELQKP-RASM 332 (403)
T ss_pred eeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-Ccce
Confidence 2466655 4555544332111123333333333 3333221 12234556677778888889998888876532 3445
Q ss_pred EEEEEecCC--CcchHHHHH-HHhhcCceeccC
Q psy10669 252 LILIDLRKN--KLTGSKVEL-VLEEIAIACNKN 281 (337)
Q Consensus 252 ~v~V~~~~~--~~~~~~~~~-~L~~~gI~v~~~ 281 (337)
.+++++.+. +.+..++.. .+++.||.+.+-
T Consensus 333 ~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg 365 (403)
T PRK08636 333 FVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPG 365 (403)
T ss_pred EEEEECCCccCCCCHHHHHHHHHHhCCEEEecc
Confidence 667887642 223455554 466789998763
No 264
>PRK06149 hypothetical protein; Provisional
Probab=98.03 E-value=0.00048 Score=75.57 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=74.6
Q ss_pred hHHHHHHhhhcCCeEEEeccc-cccccc---------e----eeeecc-------CCchhhh-hHHHHHhh-ccCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSH-ISGLIA---------G----VKGVTK-------TGEKILY-DYEEKINN-AVFPSLQG 196 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH-~~Gli~---------g----~~~T~~-------~Gg~i~~-~l~~~i~~-~~~p~~~g 196 (337)
++.++++|+++|+++|+|+.| +.|-.+ | +...+| -|+++.. ++.+.+++ ..+-..+
T Consensus 767 L~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~- 845 (972)
T PRK06149 767 LQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSST- 845 (972)
T ss_pred HHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCC-
Confidence 667889999999999999999 455544 1 111122 2333333 56665553 2221223
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC-----C--cchHH
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN-----K--LTGSK 266 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~-----~--~~~~~ 266 (337)
+.|+...|+..+.+..+.+ +...+++.+..++|.++|++. .+.+++. -...-+.-|.+... . .....
T Consensus 846 ~gnP~~~aaala~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~ 922 (972)
T PRK06149 846 GGSPVSCRIGMAVLDVLRE---EKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAA 922 (972)
T ss_pred CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHH
Confidence 4566666666565655532 245666777778888888762 1222210 01112333333211 0 01345
Q ss_pred HHHHHhhcCceeccC
Q psy10669 267 VELVLEEIAIACNKN 281 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~ 281 (337)
+.+.|.+.||.+.+.
T Consensus 923 i~~~l~~~Gvl~~~~ 937 (972)
T PRK06149 923 ICDRLLELGVIMQPT 937 (972)
T ss_pred HHHHHHhCCeEEeec
Confidence 566667789998753
No 265
>PRK07049 methionine gamma-lyase; Validated
Probab=98.01 E-value=8.6e-05 Score=74.15 Aligned_cols=158 Identities=11% Similarity=0.050 Sum_probs=100.7
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++.....+| +++++++|.+. ++.+.||+.|+..++.+++++
T Consensus 81 ~~Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v 151 (427)
T PRK07049 81 NHPNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAV 151 (427)
T ss_pred CCcCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEE
Confidence 345556787 57889999875 688999999999988888754
Q ss_pred -----------c--c------ccccEEEEc-Ccc-cccccChHHHHHHhhh------cCCeEEEeccccccccc------
Q psy10669 120 -----------N--N------ARFDFLSSG-TTC-YSRCLDYARFRQICDE------TDSIMFADMSHISGLIA------ 166 (337)
Q Consensus 120 -----------~--~------a~pklII~~-~S~-~~~~~d~~~l~eia~~------~ga~l~vD~AH~~Gli~------ 166 (337)
+ + .++|+|++. +++ .+...|.+++.+|+++ +++++++|++-...+.-
T Consensus 152 ~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g 231 (427)
T PRK07049 152 GFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHG 231 (427)
T ss_pred EEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccC
Confidence 0 0 126777776 433 2478899999999988 79999999994332211
Q ss_pred --eeeeec-c--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q psy10669 167 --GVKGVT-K--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS 233 (337)
Q Consensus 167 --g~~~T~-~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~ 233 (337)
.+..+. | .+|+++. ++.+.+..... .+.++..++....+..+++ ....++++..+|++.++
T Consensus 232 ~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~-~~g~~ls~~~a~l~~r~L~-----tl~~R~~~~~~~a~~la 305 (427)
T PRK07049 232 ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRS-AIGTQLDPHSCWMLGRSLE-----TLVLRMERANRNARAVA 305 (427)
T ss_pred CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHH-hcCCCCCHHHHHHHHcCCC-----hHHHHHHHHHHHHHHHH
Confidence 122222 2 2465554 56665554322 2222333333332222222 35677888899999999
Q ss_pred HHHHhC-CCE
Q psy10669 234 DEMIKR-GYH 242 (337)
Q Consensus 234 ~~L~~~-G~~ 242 (337)
+.|++. ++.
T Consensus 306 ~~L~~~p~V~ 315 (427)
T PRK07049 306 EFLRDHPKVE 315 (427)
T ss_pred HHHHhCCCcc
Confidence 999984 554
No 266
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.01 E-value=0.0016 Score=64.25 Aligned_cols=250 Identities=11% Similarity=0.038 Sum_probs=134.6
Q ss_pred HHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCc
Q psy10669 20 SLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWG 97 (337)
Q Consensus 20 ~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~ 97 (337)
.++.+.......-++|-..+... +|.+.+++...+.+. ..+|+ ...|.. ++.+...+.+++.+|.+...
T Consensus 23 ~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~---~~~G~~---~lr~~ia~~l~~~~g~~~~~-- 93 (402)
T PRK06107 23 ARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG-ETKYT---LVNGTP---ALRKAIIAKLERRNGLHYAD-- 93 (402)
T ss_pred HHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC-CCCCC---CCCCCH---HHHHHHHHHHHHhcCCCCCh--
Confidence 34443333333457776666655 588888887765421 11111 112332 23222234566777764311
Q ss_pred ceeecCCC-chhHHHHHHhhCCc--------------------------------------------cc-c-cccEEEE-
Q psy10669 98 CNVQPYSG-SPANFAVCEKALPT--------------------------------------------NN-A-RFDFLSS- 129 (337)
Q Consensus 98 ~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------~~-a-~pklII~- 129 (337)
.+|.+++| ++|...++.+++++ +. . ++++|++
T Consensus 94 ~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 173 (402)
T PRK06107 94 NEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILN 173 (402)
T ss_pred hhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEE
Confidence 25888898 57877667777643 00 0 2455554
Q ss_pred cCcc-cccccChHH---HHHHhhhc-CCeEEEeccccc----c--ccc------e------eeeec-c-------CCchh
Q psy10669 130 GTTC-YSRCLDYAR---FRQICDET-DSIMFADMSHIS----G--LIA------G------VKGVT-K-------TGEKI 178 (337)
Q Consensus 130 ~~S~-~~~~~d~~~---l~eia~~~-ga~l~vD~AH~~----G--li~------g------~~~T~-~-------~Gg~i 178 (337)
++++ .+...+.++ +.++|+++ |+++++|+++.- + ... + +.++. | +-|++
T Consensus 174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~ 253 (402)
T PRK06107 174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYA 253 (402)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeee
Confidence 3544 346666554 55677887 999999998742 1 010 1 11221 1 22555
Q ss_pred hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEE
Q psy10669 179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILI 255 (337)
Q Consensus 179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V 255 (337)
+. ++.+.+..... ....+++....+++...+..- +...+..+++..++.+.+.+.|++. |+.+... ..+-.+++
T Consensus 254 ~~~~~~~~~~~~~~~-~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p-~gg~~~~~ 330 (402)
T PRK06107 254 AGPADLIAAINKLQS-QSSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRRDYALALLNAIPGLSCLVP-DGAFYLYV 330 (402)
T ss_pred ecCHHHHHHHHHHHH-hcccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC-CcceEEee
Confidence 54 46665554321 112245555555555554321 2233566778888888899999875 7776532 33445666
Q ss_pred EecC-------CCc---chHH-HHHHHhhcCceeccC
Q psy10669 256 DLRK-------NKL---TGSK-VELVLEEIAIACNKN 281 (337)
Q Consensus 256 ~~~~-------~~~---~~~~-~~~~L~~~gI~v~~~ 281 (337)
+++. .+. +..+ +...+++.||.+.+-
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg 367 (402)
T PRK06107 331 NCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQG 367 (402)
T ss_pred ecccccccccccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 6632 111 3334 446667789999864
No 267
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=97.99 E-value=0.0021 Score=63.52 Aligned_cols=242 Identities=14% Similarity=0.099 Sum_probs=140.6
Q ss_pred cceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 31 NGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 31 ~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
+.|+|-..|- -.|+.+++++...+.+-- ..+. -..|.... -+...+...+-+|.+...= .+|..++| ++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~-~~Y~---~~~G~~~L---Reaia~~~~~~~~~~~~~~-~eiivt~Ga~~ 100 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGG-THYT---PSAGIPEL---REAIAEKYKRRYGLDVDPE-EEIIVTAGAKE 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhccc-CCCC---CCCCCHHH---HHHHHHHHHHHhCCCCCCC-CeEEEeCCHHH
Confidence 4677777666 458889999887654310 0111 12333333 2222345566666332100 23888888 57
Q ss_pred hHHHHHHhhCCc--------------------------------c----------c--c---cccEEEEc-Ccc-ccccc
Q psy10669 108 ANFAVCEKALPT--------------------------------N----------N--A---RFDFLSSG-TTC-YSRCL 138 (337)
Q Consensus 108 AN~~v~~aLl~~--------------------------------~----------~--a---~pklII~~-~S~-~~~~~ 138 (337)
|+..++.+++.+ + + + ++|+|+++ +++ -+...
T Consensus 101 al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~ 180 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVY 180 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCC
Confidence 898889999765 0 0 0 26788885 433 23555
Q ss_pred ChH---HHHHHhhhcCCeEEEeccccccccc------------e-----e-ee--------eccCCchhhh---hHHHHH
Q psy10669 139 DYA---RFRQICDETDSIMFADMSHISGLIA------------G-----V-KG--------VTKTGEKILY---DYEEKI 186 (337)
Q Consensus 139 d~~---~l~eia~~~ga~l~vD~AH~~Gli~------------g-----~-~~--------T~~~Gg~i~~---~l~~~i 186 (337)
+-+ .|.++|+++|++|+.|+.= .+++= . + .. ||-+-|++++ ++.+.+
T Consensus 181 ~~~~l~~i~~~a~~~~i~ii~DEiY-~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~ 259 (393)
T COG0436 181 SKEELKAIVELAREHDIIIISDEIY-EELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAAL 259 (393)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhh-hhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHH
Confidence 555 4557889999999999872 22211 1 1 11 1223477764 344433
Q ss_pred hhccCCCCCCCCcHHHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcch
Q psy10669 187 NNAVFPSLQGGPHNHAIGAIATAMLQAQS-DEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTG 264 (337)
Q Consensus 187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~-~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~ 264 (337)
.. +...+..+++.+...|...++..-.. ......++...++.+.+.+.|.+. |+.+.....-..-+++++....-+-
T Consensus 260 ~~-~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~ 338 (393)
T COG0436 260 RK-LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSE 338 (393)
T ss_pred HH-HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHH
Confidence 31 12233335666666666666654311 233455678899999999999975 4888753334566778877642133
Q ss_pred HHHHHHHhhcCceeccCc
Q psy10669 265 SKVELVLEEIAIACNKNT 282 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~ 282 (337)
..+.++|++.||.|.+-.
T Consensus 339 ~f~~~Ll~~~gV~v~PG~ 356 (393)
T COG0436 339 EFAKKLLEEAGVAVVPGS 356 (393)
T ss_pred HHHHHHHHhCCEEEeccc
Confidence 455566677899998833
No 268
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=97.99 E-value=0.0028 Score=62.61 Aligned_cols=155 Identities=12% Similarity=0.067 Sum_probs=85.6
Q ss_pred ccEEEEcCccc--ccccChHH---HHHHhhhcCCeEEEeccccc----cc-c------c------eeeeec-c-------
Q psy10669 124 FDFLSSGTTCY--SRCLDYAR---FRQICDETDSIMFADMSHIS----GL-I------A------GVKGVT-K------- 173 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~----Gl-i------~------g~~~T~-~------- 173 (337)
+|+|++..-.+ +...+.++ |.++|+++|++|+.|+++.- +- . . .+.+|. |
T Consensus 177 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGl 256 (409)
T PRK07590 177 VDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGT 256 (409)
T ss_pred ceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCc
Confidence 57666641133 46666655 44678899999999998752 21 0 0 112332 2
Q ss_pred CCchhhh--hHHHH------------HhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 TGEKILY--DYEEK------------INNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 ~Gg~i~~--~l~~~------------i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
+-|+++. ++.+. .... ......+++.....+++.++..-.....++.++++.++.+.+.+.|.+.
T Consensus 257 RiG~~i~~~~li~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 257 RCAYTVVPKELKGKTSDGEGVSLNSLWNRR-QSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA 335 (409)
T ss_pred eeEEEEcCHHHhhhccccchhhhHHHHHHH-HhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1266654 44431 1111 1111122333344444344321111233456778888888999999999
Q ss_pred CCEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCceeccC
Q psy10669 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNKN 281 (337)
Q Consensus 240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~ 281 (337)
|+++..+ ..+..+++++.. +.+..++...| ++.||.+.+-
T Consensus 336 ~~~~~~~-~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~pg 376 (409)
T PRK07590 336 GFEVYGG-VNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGTPG 376 (409)
T ss_pred CCceecC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEeCh
Confidence 9887642 345567888865 34555555554 5689998763
No 269
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=97.98 E-value=1.4e-05 Score=75.88 Aligned_cols=195 Identities=17% Similarity=0.213 Sum_probs=115.9
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA 116 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL 116 (337)
.|-| .+|++++++... + .|. -.|++-....++| ++++++||.+. .+.++|||.||..++.++
T Consensus 3 ~SD~-~~~~m~~a~~~a--~---~gd---~~Yg~D~~~~~l~----~~i~~l~g~e~-----a~f~~sGT~An~~al~~~ 64 (290)
T PF01212_consen 3 RSDT-PTPAMLEAMAAA--N---VGD---DAYGEDPTTARLE----ERIAELFGKEA-----ALFVPSGTMANQLALRAH 64 (290)
T ss_dssp S-SS-S-HHEEHHHHHT--T---SB----CCTTSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHH
T ss_pred CccC-CCHHHHHHHHcc--c---cCC---cccCCChhHHHHH----HHHHHHcCCCE-----EEEeCCCChHHHHHHHHH
Confidence 4556 889999999542 2 122 2477777888898 57889999985 577899999999999999
Q ss_pred CCc------------------------------------------------cc-----ccccEEEEcCcc-c--ccccCh
Q psy10669 117 LPT------------------------------------------------NN-----ARFDFLSSGTTC-Y--SRCLDY 140 (337)
Q Consensus 117 l~~------------------------------------------------~~-----a~pklII~~~S~-~--~~~~d~ 140 (337)
++| +. .+|++|.++.+. + +...+.
T Consensus 65 ~~~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~ 144 (290)
T PF01212_consen 65 LRPGESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSL 144 (290)
T ss_dssp HHTTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---H
T ss_pred HhcCCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCH
Confidence 754 00 126788887444 4 677777
Q ss_pred HHHH---HHhhhcCCeEEEeccccc------cccc--------eeeeeccC------Cchhhh--hH-HHH--HhhccCC
Q psy10669 141 ARFR---QICDETDSIMFADMSHIS------GLIA--------GVKGVTKT------GEKILY--DY-EEK--INNAVFP 192 (337)
Q Consensus 141 ~~l~---eia~~~ga~l~vD~AH~~------Gli~--------g~~~T~~~------Gg~i~~--~l-~~~--i~~~~~p 192 (337)
++|+ ++|+++|..|+.|.|=.+ |... .+.+.++| |++++. ++ .+. ..+..-.
T Consensus 145 ~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg 224 (290)
T PF01212_consen 145 EELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGG 224 (290)
T ss_dssp HHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhcc
Confidence 7655 788999999999999543 2222 23333333 455544 33 221 1111111
Q ss_pred CC-CCCCcHHHHHH----HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669 193 SL-QGGPHNHAIGA----IATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID 256 (337)
Q Consensus 193 ~~-~g~~~~~~iaa----la~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~ 256 (337)
++ +.+ .+++ ...++.. . ..+.+...+-.++++.|++.|...|+.+.. .++++++.++
T Consensus 225 ~~~~~G----~~~a~~~~~~~~l~~-l-~~~~~~~~~~~~~A~~La~~l~~~~~~~~~-~~~tn~~~~~ 286 (290)
T PF01212_consen 225 GMRQAG----VLAAAELYQFAALRA-L-ELWLERARHANAMAKRLAAGLEALGGVLPR-PVETNQVFVD 286 (290)
T ss_dssp HHHHTT----HHHHHHHHHHHHHCH-E-ECSHHHHHCHHHHHHCHHHCHHEECEEEET-TSS-HHHHHH
T ss_pred Ceeecc----eeeeechhhHHHHHH-H-HhhHHHHHHHHHHHHHHHHHHHHCCCcccC-CCCCcEEeEE
Confidence 11 111 1222 1122222 1 244677888899999999999999988664 3555554443
No 270
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=97.97 E-value=0.0012 Score=65.42 Aligned_cols=137 Identities=12% Similarity=0.102 Sum_probs=76.2
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccce---------e---eeec-c------CCchhhh--hHHHHHhhc--cCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIAG---------V---KGVT-K------TGEKILY--DYEEKINNA--VFPSLQG 196 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~g---------~---~~T~-~------~Gg~i~~--~l~~~i~~~--~~p~~~g 196 (337)
+++|+++|+++|++||+|+.| .|+..| + ..|. | ..|.+++ ++.+.+.+. .+-+.+-
T Consensus 218 l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~ 296 (423)
T TIGR00713 218 LAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTL 296 (423)
T ss_pred HHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCC
Confidence 568899999999999999999 455321 1 0111 1 1233333 566666531 1112222
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCCeEEEEEecCCCc---------c
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDVHLILIDLRKNKL---------T 263 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~h~v~V~~~~~~~---------~ 263 (337)
+.++...++..+++..+.+. .+.+++.+..+++++.|.+ .|+..... ....++.|.+..... +
T Consensus 297 ~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~-~~g~~~~v~~~~~~~~~~~~~~~~~ 372 (423)
T TIGR00713 297 SGNPLAMAAGLATLKLLDEE---GVYTELDELAKRLAEGLSEVLEDTGIPHTVN-RVGSMFSLFFTEEEVTNYADAKKSD 372 (423)
T ss_pred CCCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeccEEEEEEecCCCCChhhhhccc
Confidence 45666666666667665432 2566777777777666643 56543210 134455555543211 1
Q ss_pred h---HHHHHHHhhcCceeccC
Q psy10669 264 G---SKVELVLEEIAIACNKN 281 (337)
Q Consensus 264 ~---~~~~~~L~~~gI~v~~~ 281 (337)
. ..+.+.|.+.||.+...
T Consensus 373 ~~~~~~~~~~l~~~Gv~v~~~ 393 (423)
T TIGR00713 373 TELFAKFFHEMLDKGVFLPPS 393 (423)
T ss_pred HHHHHHHHHHHHHCCeEEecC
Confidence 1 24555666789998753
No 271
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.96 E-value=0.00013 Score=72.53 Aligned_cols=147 Identities=16% Similarity=0.152 Sum_probs=88.6
Q ss_pred hHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc--CCchh-----h-h-hHHHHHhhc--cCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK--TGEKI-----L-Y-DYEEKINNA--VFPSL 194 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~--~Gg~i-----~-~-~l~~~i~~~--~~p~~ 194 (337)
+++|+++|+++|++|++|+.| .|+- + + +...+| .||++ + . ++.+.+... -.+.+
T Consensus 223 l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~ 301 (423)
T PRK05964 223 LAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFM 301 (423)
T ss_pred HHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccc
Confidence 667889999999999999999 4431 1 1 111223 14432 2 2 465555321 01111
Q ss_pred C-C--CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCC--cchHHH
Q psy10669 195 Q-G--GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNK--LTGSKV 267 (337)
Q Consensus 195 ~-g--~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~--~~~~~~ 267 (337)
. + +.++..+++..+++..+.+ +...+++.++.++|.+.|++. ++..+. ......++.+.+.+.. .....+
T Consensus 302 ~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l 378 (423)
T PRK05964 302 HSPSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPAL 378 (423)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHH
Confidence 1 2 3577777777777766643 346789999999999998874 333222 1134556667775432 124567
Q ss_pred HHHHhhcCceeccCc-ccchhhhh
Q psy10669 268 ELVLEEIAIACNKNT-GISLAAEI 290 (337)
Q Consensus 268 ~~~L~~~gI~v~~~~-girig~~~ 290 (337)
.+.|.+.||.+.... .|||..+.
T Consensus 379 ~~~l~~~Gv~v~~~~~~lR~~p~l 402 (423)
T PRK05964 379 RAFALERGVLLRPLGNTIYLMPPY 402 (423)
T ss_pred HHHHHHCCeEEEecCCEEEEeCCc
Confidence 777888899987643 57776553
No 272
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=97.96 E-value=0.0027 Score=61.97 Aligned_cols=157 Identities=10% Similarity=0.078 Sum_probs=90.6
Q ss_pred ccEEEEcCccc--ccccChHHHHHHhhh-cCCeEEEeccccc--c--ccc--------eeeeec-c-------CCchhhh
Q psy10669 124 FDFLSSGTTCY--SRCLDYARFRQICDE-TDSIMFADMSHIS--G--LIA--------GVKGVT-K-------TGEKILY 180 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~~~l~eia~~-~ga~l~vD~AH~~--G--li~--------g~~~T~-~-------~Gg~i~~ 180 (337)
+|+|++....+ +...+.+++.++++- +++++++|+++.- + .+. .+.+|. | +-|++++
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~ 248 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIG 248 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeec
Confidence 67787653344 477777777776532 3899999999741 1 011 122332 2 2366665
Q ss_pred --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEe
Q psy10669 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDL 257 (337)
Q Consensus 181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~ 257 (337)
++.+.+.....+. + .+.....+...++.+. ..+.+..++..+.-+.+.+.|.+. |+.+.. +...-+++.+
T Consensus 249 ~~~l~~~l~~~~~~~--~-~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~g~f~~~~l 321 (374)
T PRK02610 249 HPELIAVLEKVRLPY--N-LPSFSQLAAQLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWP--SAANFLYLRL 321 (374)
T ss_pred CHHHHHHHHHhcCCC--C-CCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCC--CcceEEEEeC
Confidence 5666666543332 2 2233333333443321 233333445555556677777664 776543 3444577877
Q ss_pred cCCCcchHHHHHHHhhcCceeccCc-ccchhh
Q psy10669 258 RKNKLTGSKVELVLEEIAIACNKNT-GISLAA 288 (337)
Q Consensus 258 ~~~~~~~~~~~~~L~~~gI~v~~~~-girig~ 288 (337)
.. +.+..++.+.|.+.||.+.... .+||+.
T Consensus 322 ~~-~~~~~~~~~~l~~~gi~v~~~~~~lRls~ 352 (374)
T PRK02610 322 SQ-DAALAALHQALKAQGTLVRHTGGGLRITI 352 (374)
T ss_pred CC-CCCHHHHHHHHHHCCEEEEeCCCeEEEeC
Confidence 54 3467888888988999997533 788864
No 273
>PRK06207 aspartate aminotransferase; Provisional
Probab=97.96 E-value=0.0022 Score=63.46 Aligned_cols=243 Identities=9% Similarity=0.019 Sum_probs=130.2
Q ss_pred cccceeeecc-CCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669 29 QINGIELIAS-ENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG 105 (337)
Q Consensus 29 q~~~i~l~as-en~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg 105 (337)
+..-++|--. .|. .+|.+.+++...+.+....+|+. ..|.. ++-....+.+++.+|.+-.. .-+|..++|
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~l~~~~g~~~~~-~~~I~it~G 110 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE---YRGDA---DIRELLAARLAAFTGAPVDA-ADELIITPG 110 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC---CCCCH---HHHHHHHHHHHHHhCCCCCC-CCCEEEeCC
Confidence 3445666533 342 46788888876543211112221 12332 23222234666777853110 014777787
Q ss_pred -chhHHHHHHhhCCc------------------------------c--------------cc-----cccEEEEc-Ccc-
Q psy10669 106 -SPANFAVCEKALPT------------------------------N--------------NA-----RFDFLSSG-TTC- 133 (337)
Q Consensus 106 -t~AN~~v~~aLl~~------------------------------~--------------~a-----~pklII~~-~S~- 133 (337)
+++...++.+++++ . +. ++|+|++. +++
T Consensus 111 a~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NP 190 (405)
T PRK06207 111 TQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNP 190 (405)
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCC
Confidence 56777777888654 0 00 15655444 533
Q ss_pred cccccCh---HHHHHHhhhcCCeEEEeccccc----c-----cc--c------eeeeec-c-------CCchhhh--hHH
Q psy10669 134 YSRCLDY---ARFRQICDETDSIMFADMSHIS----G-----LI--A------GVKGVT-K-------TGEKILY--DYE 183 (337)
Q Consensus 134 ~~~~~d~---~~l~eia~~~ga~l~vD~AH~~----G-----li--~------g~~~T~-~-------~Gg~i~~--~l~ 183 (337)
-+...+. ++|.++|+++|+++++|+++.- | +. . .++++. | +-|+++. ++.
T Consensus 191 TG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~ 270 (405)
T PRK06207 191 AGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAII 270 (405)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHH
Confidence 2466664 4566778999999999999753 2 11 0 112222 1 2366654 465
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCc
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKL 262 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~ 262 (337)
+.+.....+... +......+++..++.+- ....++..++..++.+.+.+.|.+. |+.+... ...-.+++++...+.
T Consensus 271 ~~~~~~~~~~~~-~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-~gg~fl~~~l~~~~~ 347 (405)
T PRK06207 271 DRMEKLQAIVSL-RAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAP-QAGSYLFPRLPRLAV 347 (405)
T ss_pred HHHHHHHhHhcc-CCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-CeeEEEEEeCcccCC
Confidence 555433221112 22223344444443221 1123555666777777888888775 7776531 234467788865445
Q ss_pred chHHHHHHHh-hcCceeccC
Q psy10669 263 TGSKVELVLE-EIAIACNKN 281 (337)
Q Consensus 263 ~~~~~~~~L~-~~gI~v~~~ 281 (337)
+..++.+.|. ++||.+.+-
T Consensus 348 ~~~~~~~~l~~~~gV~v~pG 367 (405)
T PRK06207 348 SLHDFVKILRLQAGVIVTPG 367 (405)
T ss_pred CHHHHHHHHHHhcCEEEeCc
Confidence 6677777775 689998863
No 274
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=97.91 E-value=0.0014 Score=65.25 Aligned_cols=150 Identities=9% Similarity=0.038 Sum_probs=91.0
Q ss_pred ccEEEEcC-ccc--ccccChH---HHHHHhhhc-CCeEEEeccccc----c---ccc------eeeeec-c------CCc
Q psy10669 124 FDFLSSGT-TCY--SRCLDYA---RFRQICDET-DSIMFADMSHIS----G---LIA------GVKGVT-K------TGE 176 (337)
Q Consensus 124 pklII~~~-S~~--~~~~d~~---~l~eia~~~-ga~l~vD~AH~~----G---li~------g~~~T~-~------~Gg 176 (337)
+|+|++.+ -.+ +...+.+ +|.++|+++ +++++.|+++.- + .+. .+.+|. | +-|
T Consensus 212 ~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG 291 (431)
T PRK15481 212 ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLA 291 (431)
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCceeE
Confidence 67776652 233 4777776 677888999 999999998641 1 111 122332 1 236
Q ss_pred hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669 177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF----KSYQAQVKANASHLSDEMIKRGYHVVTGGTDV 250 (337)
Q Consensus 177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~----~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~ 250 (337)
+++. ++.+.+.....+... +.+.....+++.++.. .++ ++.++++.++-+.+.+.|.+.|+.+... ..+
T Consensus 292 ~~i~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~---~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p-~gg 366 (431)
T PRK15481 292 FVASDSATSARLRLRLNSGTQ-WVSHLLQDLVYACLTD---PEYQARLAQARLFYAQRRQKLARALQQYGIAIPSP-GDG 366 (431)
T ss_pred EEeCCHHHHHHHHHHHhcccc-CCCHHHHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC-CCe
Confidence 6665 466666543222222 2344444555454432 222 4567778888888889999888876332 345
Q ss_pred eEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 251 HLILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 251 h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
-.+++++.. +..++.+.|.+.||.+.+-
T Consensus 367 ~f~~~~l~~---~~~~~~~~l~~~gV~v~pg 394 (431)
T PRK15481 367 LNLWLPLDT---DSQATALTLAKSGWLVREG 394 (431)
T ss_pred EEEEEECCC---CHHHHHHHHHHCCcEEecC
Confidence 566788764 3566777788889999873
No 275
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=97.90 E-value=0.00017 Score=72.34 Aligned_cols=157 Identities=16% Similarity=0.112 Sum_probs=90.0
Q ss_pred cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--------CCc
Q psy10669 125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--------TGE 176 (337)
Q Consensus 125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--------~Gg 176 (337)
..||+. ..+++.++ ++.|+++|+++|++||+|+.|+ .|-.+ ++ ...+| -|+
T Consensus 217 aavivE-pi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~ga 295 (442)
T PRK13360 217 AAVIVE-PVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGA 295 (442)
T ss_pred EEEEEc-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEE
Confidence 466665 47766444 5568899999999999999994 55444 11 11112 233
Q ss_pred hhhh-hHHHHHhhc-------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEe---
Q psy10669 177 KILY-DYEEKINNA-------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVV--- 244 (337)
Q Consensus 177 ~i~~-~l~~~i~~~-------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~--- 244 (337)
++.. ++.+.+... ..+++++ .|+...|+..+++..+.+ + ...+++.++.++|.+.|++.+ +..+
T Consensus 296 v~~~~~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~-~--~l~~~~~~~g~~l~~~l~~l~~~~~v~~v 371 (442)
T PRK13360 296 VFVSSEIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYER-E--GLLTRAARLAPYWEDALHSLRDAPHVIDI 371 (442)
T ss_pred EEEcHHHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHhhcCCCeeee
Confidence 3333 454443321 1233454 477777777777766643 2 478899999999999998742 3221
Q ss_pred -cCCCCCeEEEEEecC--CC--cchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 245 -TGGTDVHLILIDLRK--NK--LTGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 245 -~~~t~~h~v~V~~~~--~~--~~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
+-|. +.-+.+.. .+ -....+...|.+.||.+.... -+||.-+
T Consensus 372 rG~Gl---~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lr~~Pp 419 (442)
T PRK13360 372 RNLGL---VGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTGDILALSPP 419 (442)
T ss_pred eccce---EEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecCCEEEEeCC
Confidence 1111 11122221 11 123456667777899986533 4777533
No 276
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=97.90 E-value=6.2e-05 Score=63.55 Aligned_cols=82 Identities=16% Similarity=0.148 Sum_probs=60.0
Q ss_pred HHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------c--
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------N-- 120 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------~-- 120 (337)
+++++++|+.+.. | + +..++|+.|+..++.++.++ .
T Consensus 6 ~~~l~~~~~~~~~-~-~-~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 82 (170)
T cd01494 6 EEKLARLLQPGND-K-A-VFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVA 82 (170)
T ss_pred HHHHHHHcCCCCC-c-E-EEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhh
Confidence 4688999953321 2 2 33347789998888998642 0
Q ss_pred c----c---cccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 121 N----A---RFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 121 ~----a---~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
. . +|+++++.++.++ ...|.++|.++|+++|+++++|++|..+...
T Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~ 137 (170)
T cd01494 83 ILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP 137 (170)
T ss_pred hhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence 1 1 2788888766553 5667899999999999999999999987776
No 277
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=97.89 E-value=0.0046 Score=60.91 Aligned_cols=155 Identities=11% Similarity=0.067 Sum_probs=82.7
Q ss_pred ccEEEEcCccc--ccccCh---HHHHHHhhhcCCeEEEeccccc----c-c-cc----------ee-eeec-c-------
Q psy10669 124 FDFLSSGTTCY--SRCLDY---ARFRQICDETDSIMFADMSHIS----G-L-IA----------GV-KGVT-K------- 173 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~---~~l~eia~~~ga~l~vD~AH~~----G-l-i~----------g~-~~T~-~------- 173 (337)
+|+|++..-.+ +...+. ++|.++|+++|+++++|+++.- + . .. .+ ++|. |
T Consensus 174 ~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl 253 (402)
T TIGR03542 174 IDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV 253 (402)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCc
Confidence 46666642223 466664 4566778899999999999752 1 1 10 01 2222 2
Q ss_pred CCchhhh--hHH--------HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE
Q psy10669 174 TGEKILY--DYE--------EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV 243 (337)
Q Consensus 174 ~Gg~i~~--~l~--------~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v 243 (337)
+=|++++ ++. +....... ....+++.....++...+..-.....++.++...++.+.+.+.|.+.|+++
T Consensus 254 RiG~~i~~~~l~~~~~~~~~~~~~~~~~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 332 (402)
T TIGR03542 254 RLGWTVVPKELTYADGHSVIQDWERRQC-TKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKV 332 (402)
T ss_pred ceEEEEecHHHhhcchhhHHHHHHHHhh-hcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 1255554 343 22211111 112223333333322322210001233455667788888999999988887
Q ss_pred ecCCCCCeEEEEEecCCCcchHHHHHH-HhhcCceeccC
Q psy10669 244 VTGGTDVHLILIDLRKNKLTGSKVELV-LEEIAIACNKN 281 (337)
Q Consensus 244 ~~~~t~~h~v~V~~~~~~~~~~~~~~~-L~~~gI~v~~~ 281 (337)
..+ ....-+++.+.. .++..++.+. +++.||.+.+.
T Consensus 333 ~~~-~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~pg 369 (402)
T TIGR03542 333 YGG-EHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGTPG 369 (402)
T ss_pred cCC-CceeEEEEECCC-CCCHHHHHHHHHHhCCEEEeCc
Confidence 642 345566788764 3456565555 45689998864
No 278
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=97.88 E-value=0.0017 Score=62.28 Aligned_cols=184 Identities=13% Similarity=0.066 Sum_probs=107.2
Q ss_pred HHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhCCc------------------------------------c---c
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKALPT------------------------------------N---N 121 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl~~------------------------------------~---~ 121 (337)
++.+++++|.+. .+|..++|+ ++...++. ++++ + .
T Consensus 46 r~~ia~~~~~~~----~~I~it~Gs~~~l~~~~~-~~~~~~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~~ 120 (332)
T PRK06425 46 EDQIKIYTQGLK----IKVLIGPGLTHFIYRLLS-YINVGNIIIVEPNFNEYKGYAFTHGIRISALPFNLINNNPEILNN 120 (332)
T ss_pred HHHHHHHhCCCc----ceEEECCCHHHHHHHHHH-HhCCCcEEEeCCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHhh
Confidence 357889999886 368888895 56544444 4432 0 0
Q ss_pred ccccEEEEc-Ccc-cccccChHHHH---HHhhhcCCeEEEeccccc----cc---cc--------eeeeec-c----CC-
Q psy10669 122 ARFDFLSSG-TTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----GL---IA--------GVKGVT-K----TG- 175 (337)
Q Consensus 122 a~pklII~~-~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----Gl---i~--------g~~~T~-~----~G- 175 (337)
.++|+|++. +.+ -+...+.+++. ++|+++|+++++|++-.- +. .. .+.+|. | .|
T Consensus 121 ~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl 200 (332)
T PRK06425 121 YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL 200 (332)
T ss_pred cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchh
Confidence 136777765 433 24777766655 557889999999998431 10 00 123343 2 12
Q ss_pred --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
|++++ ++.+.+.....|.. ...+..+++. . ... ....+..++.+.++-+++.+.|.+.|+++... ++..
T Consensus 201 RiGy~v~~~~li~~l~~~~~~~~---~~~~~~~~l~-~-~~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~g~ 273 (332)
T PRK06425 201 RIGYIATDDYNMKISRKITEPWS---VCDPAIDFIR-S-IDL-DYVAKHSLDIMENERSYLINNLEAMGFRAAGD-PSAN 273 (332)
T ss_pred hheeeecCHHHHHHHHHcCCCCc---cCHHHHHHHH-H-hhh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCce
Confidence 67665 57676665422321 1122221111 1 111 11124557777888888999999999887632 2333
Q ss_pred EEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 252 LILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
-+++.+. +..++.+.|.+.||.+.+-
T Consensus 274 f~~~~~~----~~~~~~~~l~~~gi~v~~~ 299 (332)
T PRK06425 274 FITFMIP----DAHDFYSYLLKNGILVRLL 299 (332)
T ss_pred EEEEEcC----CHHHHHHHHHHCCeEEEEC
Confidence 4666654 4567777887789998763
No 279
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=97.88 E-value=0.0026 Score=61.70 Aligned_cols=225 Identities=14% Similarity=0.084 Sum_probs=127.4
Q ss_pred cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc
Q psy10669 29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS 106 (337)
Q Consensus 29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt 106 (337)
..+.|.|-..+|-. +|.+.+++...+.. ..+|+. .. ..++ ++.++++++.+. -+|..++|+
T Consensus 21 ~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~------~~-~~~L----r~aia~~~~v~~----~~I~it~G~ 83 (360)
T PRK07392 21 PDAILDFSASINPLGPPESVIAAIQSALSA--LRHYPD------PD-YREL----RLALAQHHQLPP----EWILPGNGA 83 (360)
T ss_pred cccEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCC------cC-HHHH----HHHHHHHhCcCh----hhEEECCCH
Confidence 33457777776754 78888888754332 112221 11 1222 456677888876 368888985
Q ss_pred -hhHHHHHHhhCCc---------------------------------c-------cc-------cccEEEEc-Ccc-ccc
Q psy10669 107 -PANFAVCEKALPT---------------------------------N-------NA-------RFDFLSSG-TTC-YSR 136 (337)
Q Consensus 107 -~AN~~v~~aLl~~---------------------------------~-------~a-------~pklII~~-~S~-~~~ 136 (337)
++...++.++.+. . .. +++++++. +.+ -+.
T Consensus 84 ~~~i~~~~~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~ 163 (360)
T PRK07392 84 AELLTWAGRELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHNPTGK 163 (360)
T ss_pred HHHHHHHHHHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCCCCCC
Confidence 5665556666432 0 00 14666654 433 257
Q ss_pred ccChHHHHHHhhhcCCeEEEeccccc----c----cc---c-----eeeeec-c-------CCchhhh--hHHHHHhhcc
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHIS----G----LI---A-----GVKGVT-K-------TGEKILY--DYEEKINNAV 190 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~----G----li---~-----g~~~T~-~-------~Gg~i~~--~l~~~i~~~~ 190 (337)
..+-++|.+++++++ ++++|+++.- | ++ . .+.+|. | +-|+++. ++.+.+....
T Consensus 164 ~~~~~~l~~l~~~~~-~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~ 242 (360)
T PRK07392 164 LWSREAILPLLEQFA-LVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR 242 (360)
T ss_pred CcCHHHHHHHHHHCC-EEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhC
Confidence 788889999999988 5777998641 1 01 1 122232 2 2355554 4656565443
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~ 268 (337)
.+ .+.+.....++..++.. ..+ +..++.+.++-+.+.+.|.+. |+.+.. +...-+++++.. +..++.
T Consensus 243 ~~---~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~~fl~~~~~~---~~~~l~ 311 (360)
T PRK07392 243 DP---WPVNGLAAAAAIAALAD---RDFQQQTWAWLPPAREALFQGLASLPGLTPLP--SAANFLLVQSQG---SALQLQ 311 (360)
T ss_pred CC---CCCCHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCCEEEEEcCC---CHHHHH
Confidence 22 23344444444444432 223 233455667777788888774 887764 345556676643 445555
Q ss_pred HH-HhhcCceeccCc
Q psy10669 269 LV-LEEIAIACNKNT 282 (337)
Q Consensus 269 ~~-L~~~gI~v~~~~ 282 (337)
.. |+++||.+.+-.
T Consensus 312 ~~ll~~~gv~v~pg~ 326 (360)
T PRK07392 312 EKLLQQHRILIRDCL 326 (360)
T ss_pred HHHHhhCCEEEEeCC
Confidence 55 577899987643
No 280
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=97.87 E-value=0.0018 Score=64.03 Aligned_cols=155 Identities=15% Similarity=0.190 Sum_probs=83.9
Q ss_pred ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEecccccccc-c----------------eeeeec-c-------
Q psy10669 124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLI-A----------------GVKGVT-K------- 173 (337)
Q Consensus 124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli-~----------------g~~~T~-~------- 173 (337)
+++|++..-++ +...+ +++|.++|+++|+++++|+++. .+. . .+.++. |
T Consensus 178 ~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl 256 (412)
T PTZ00433 178 TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGW 256 (412)
T ss_pred ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCccchhhccCCCceEEEccchhhcCCCCe
Confidence 57777643333 34444 5556778899999999999985 221 0 112222 2
Q ss_pred CCchhhh--------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEe
Q psy10669 174 TGEKILY--------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVV 244 (337)
Q Consensus 174 ~Gg~i~~--------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~ 244 (337)
+-|+++. ++.+.+.....+ .. +.+.....++..++.+-.+...++.++++.++-+.+.+.|.+ .|+.+.
T Consensus 257 RlG~~i~~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 334 (412)
T PTZ00433 257 RLGWLLLVDPHGNGGDFLDGMKRLGML-VC-GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPT 334 (412)
T ss_pred eEEEEEEeCCcccHHHHHHHHHHHhhc-cC-CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 1255542 244444432221 12 334444444444443311123356677788888888888887 477654
Q ss_pred cCCCCCeEEEEEecCC---Cc-chHHHHHHH-hhcCceeccCc
Q psy10669 245 TGGTDVHLILIDLRKN---KL-TGSKVELVL-EEIAIACNKNT 282 (337)
Q Consensus 245 ~~~t~~h~v~V~~~~~---~~-~~~~~~~~L-~~~gI~v~~~~ 282 (337)
.. ...-.+++.+... +. +..++.+.| ++.||.+.+..
T Consensus 335 ~p-~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 376 (412)
T PTZ00433 335 MP-RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGE 376 (412)
T ss_pred CC-CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCcc
Confidence 32 2244556666432 11 345555555 56899987643
No 281
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=97.86 E-value=0.00018 Score=72.72 Aligned_cols=110 Identities=13% Similarity=0.040 Sum_probs=68.3
Q ss_pred cEEEEcCcccccccChH-------HHHHHhhhcCCeEEEeccccccccce---------e---eee-cc-------CCch
Q psy10669 125 DFLSSGTTCYSRCLDYA-------RFRQICDETDSIMFADMSHISGLIAG---------V---KGV-TK-------TGEK 177 (337)
Q Consensus 125 klII~~~S~~~~~~d~~-------~l~eia~~~ga~l~vD~AH~~Gli~g---------~---~~T-~~-------~Gg~ 177 (337)
..||+. ..+++.+++. .|+++|+++|++||+|+.| .|+-.+ + ..| +| -|++
T Consensus 248 AavI~E-pv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~t~gK~lggG~Pigav 325 (474)
T PLN02482 248 AAVILE-PVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLTTLGKVIGGGLPVGAY 325 (474)
T ss_pred EEEEEC-CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEEEecchhhCCCceEEE
Confidence 456664 5777665543 4889999999999999999 576332 1 012 22 2344
Q ss_pred hhh-hHHHHHhhccCCCCCCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 178 ILY-DYEEKINNAVFPSLQGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 178 i~~-~l~~~i~~~~~p~~~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
+.. ++.+.+.+.-.....+| .++..+|+...++..+.+ ++..+++.++.++|+++|.+.
T Consensus 326 ~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 326 GGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEA 387 (474)
T ss_pred EEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHH
Confidence 222 56665543211112233 566677775555655533 357889999999999999874
No 282
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=97.86 E-value=0.0002 Score=71.60 Aligned_cols=156 Identities=13% Similarity=0.140 Sum_probs=86.6
Q ss_pred ccEEEEcCcccccccC---hHHHHHHhhhcCCeEEEeccccccccce---------e---eee-cc--CCchh----hh-
Q psy10669 124 FDFLSSGTTCYSRCLD---YARFRQICDETDSIMFADMSHISGLIAG---------V---KGV-TK--TGEKI----LY- 180 (337)
Q Consensus 124 pklII~~~S~~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g---------~---~~T-~~--~Gg~i----~~- 180 (337)
...||+ +++++++.| ++.|+++|+++|++||+|+.| +|+-.. + ..| +| .||+- ++
T Consensus 188 ~aavi~-Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~ 265 (431)
T PRK06209 188 IACVIL-EPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGK 265 (431)
T ss_pred EEEEEE-ccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceeeehhhhcCCcccEEEEEH
Confidence 346666 567777554 667889999999999999999 676331 0 012 12 13332 22
Q ss_pred -hHHHH--Hhh--ccCCCC---CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEE--ecC
Q psy10669 181 -DYEEK--INN--AVFPSL---QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHV--VTG 246 (337)
Q Consensus 181 -~l~~~--i~~--~~~p~~---~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v--~~~ 246 (337)
++.+. +.. .-.+++ +-++|+..+|+..+++..+.+ + ...+++.++.++|++.|++ .++.. -+.
T Consensus 266 ~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~-~--~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~ 342 (431)
T PRK06209 266 REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD-E--DVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVS 342 (431)
T ss_pred HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc-c--CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 34443 210 001111 223566677777777776643 2 4788999999999999876 34432 111
Q ss_pred CCCCeEEEEEecCCCcchH----HHHHHHhhcCceeccCcccchh
Q psy10669 247 GTDVHLILIDLRKNKLTGS----KVELVLEEIAIACNKNTGISLA 287 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~~~~----~~~~~L~~~gI~v~~~~girig 287 (337)
++...+.++.....+.... .+.+.|.+.||.+. .++|+
T Consensus 343 G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p---~l~is 384 (431)
T PRK06209 343 GRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMP---SLVVS 384 (431)
T ss_pred cceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcccc---ccccc
Confidence 2333333332222111111 34455667799875 35554
No 283
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=97.85 E-value=0.0032 Score=60.63 Aligned_cols=223 Identities=13% Similarity=0.041 Sum_probs=125.5
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~ 107 (337)
..|.|--.+|.. +|.+.+++.+.+......+||-. | ..++ |+.+++++|.+. -+|.+++|+ +
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----g---~~~l----r~~ia~~~~~~~----~~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHI----T---SDPL----REAIAEFYGLDA----ENIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCC----C---HHHH----HHHHHHHhCcCc----ceEEEcCCHHH
Confidence 345665566664 68898888765432111122211 1 2233 457788999876 368888995 5
Q ss_pred hHHHHHHhhCCc---------------------------------------cc--ccccEEEEc-Ccc-cccccChHHHH
Q psy10669 108 ANFAVCEKALPT---------------------------------------NN--ARFDFLSSG-TTC-YSRCLDYARFR 144 (337)
Q Consensus 108 AN~~v~~aLl~~---------------------------------------~~--a~pklII~~-~S~-~~~~~d~~~l~ 144 (337)
+...++.++-.+ +. .++|++++. +.+ .+...+.++|.
T Consensus 84 ~l~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~ 163 (337)
T PRK03967 84 LISYLVKLFEGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAKNASAVFICSPNNPTGNLQPEEEIL 163 (337)
T ss_pred HHHHHHHHhCCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 655555544211 00 124666554 423 35888889999
Q ss_pred HHhhhcCCeEEEeccccccccc-------------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHH
Q psy10669 145 QICDETDSIMFADMSHISGLIA-------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNH 201 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~ 201 (337)
++++ +|+++++|+++.- +.. .+..|. | +-|+++. ++.+.+.....+. +.+.+
T Consensus 164 ~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~---~~~~~ 238 (337)
T PRK03967 164 KVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPF---SLNIL 238 (337)
T ss_pred HHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCC---CCCHH
Confidence 9995 6999999999851 111 122232 2 2367665 5666666543332 33444
Q ss_pred HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
...++..++..- ..+.+.++.+.++-+.+.+.|.+.++ . +.+.-+++.+. +.+.|.+.||.++..
T Consensus 239 ~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~~~~~~~~~~~--------~~~~l~~~gi~v~~~ 303 (337)
T PRK03967 239 TMKIVRLALDHY--DLIEERIDYIIKERERVRRELGEYAY---P--SDANFLLLKLD--------AYDYLLENGIVVRKL 303 (337)
T ss_pred HHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHhccCcC---C--CCCcEEEEhHH--------HHHHHHHCCEEEEeC
Confidence 444444444321 23345556667777788888876532 1 23334556542 456666779998643
Q ss_pred c-----ccchhh
Q psy10669 282 T-----GISLAA 288 (337)
Q Consensus 282 ~-----girig~ 288 (337)
. .+||+.
T Consensus 304 ~~~~~~~~Ri~~ 315 (337)
T PRK03967 304 SGRLEGHIRVTV 315 (337)
T ss_pred CCCCCCeEEEec
Confidence 2 467653
No 284
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.85 E-value=0.00078 Score=64.73 Aligned_cols=135 Identities=21% Similarity=0.291 Sum_probs=91.8
Q ss_pred hHHHHHHhhhcCCeEEEecccccc---ccc-----------------------eeeeecc------CCchhhh------h
Q psy10669 140 YARFRQICDETDSIMFADMSHISG---LIA-----------------------GVKGVTK------TGEKILY------D 181 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~G---li~-----------------------g~~~T~~------~Gg~i~~------~ 181 (337)
.+..++||++|++.++.|++-.+= +|- |++.+.| .|||+.- |
T Consensus 208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fD 287 (471)
T COG3033 208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFD 287 (471)
T ss_pred HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCccHHH
Confidence 445668999999999999997651 111 2233333 3888853 2
Q ss_pred HHHHH-----hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669 182 YEEKI-----NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID 256 (337)
Q Consensus 182 l~~~i-----~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~ 256 (337)
+-... -..-||. +|+..--.+.++|+++.|..+ ..|.++-++..++|++.|.+.|..|+- ..-.|-+.||
T Consensus 288 vy~~~~~~~V~~eG~~t-YGgl~GrdmealAvGL~e~~~---~~yl~~Rv~Qv~YL~~~l~~~GVpi~~-paGGHavfvd 362 (471)
T COG3033 288 VYEECRTLVVVQEGFPT-YGGLAGRDMEALAVGLREGVN---FDYLAHRVAQVQYLADGLEEAGVPIVQ-PAGGHAVFVD 362 (471)
T ss_pred HHHHHHhheEeeccccc-cCcccchhHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHhcCCeeEe-cCCCceEEee
Confidence 32211 1223543 667777899999999999875 355666678899999999999998774 3567888888
Q ss_pred ecC-------CCcchHHHHHHHh-hcCceec
Q psy10669 257 LRK-------NKLTGSKVELVLE-EIAIACN 279 (337)
Q Consensus 257 ~~~-------~~~~~~~~~~~L~-~~gI~v~ 279 (337)
.+. +.+.++.++-.|. ++||.+-
T Consensus 363 a~~~lphip~eqFpaqala~ely~e~GiRav 393 (471)
T COG3033 363 AGKFLPHIPAEQFPAQALACELYKEAGIRAV 393 (471)
T ss_pred hhhhcCCCChhhCcHHHHHHHHHHHhCeeee
Confidence 643 4455665555555 4798864
No 285
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=97.85 E-value=0.0003 Score=71.96 Aligned_cols=127 Identities=16% Similarity=0.169 Sum_probs=84.5
Q ss_pred CcccccccChHHHHHHhhhcCCeEEEeccccccccc---------e------eee-ecc-----CC-chhh-h--hHHHH
Q psy10669 131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------G------VKG-VTK-----TG-EKIL-Y--DYEEK 185 (337)
Q Consensus 131 ~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g------~~~-T~~-----~G-g~i~-~--~l~~~ 185 (337)
.+..+...|+++|.++|+++|++++||+||+.+.+. | ++. .|| +| |+++ . ++.+.
T Consensus 275 tt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~ 354 (522)
T TIGR03799 275 TTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSA 354 (522)
T ss_pred CcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHH
Confidence 345789999999999999999999999999977653 2 222 232 23 4443 2 23222
Q ss_pred Hhhc---cC---------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeE
Q psy10669 186 INNA---VF---------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHL 252 (337)
Q Consensus 186 i~~~---~~---------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~ 252 (337)
+... ++ ..+.+|-.... ..+..+++.+....++++.++.++++++|++.|.+ .+|++++. .+-++
T Consensus 355 ~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~-p~l~i 432 (522)
T TIGR03799 355 IEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE-PELCL 432 (522)
T ss_pred hccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC-CCccE
Confidence 2210 00 12345544444 35778888887788899999999999999999987 59999863 33444
Q ss_pred EEEEecC
Q psy10669 253 ILIDLRK 259 (337)
Q Consensus 253 v~V~~~~ 259 (337)
+...+.+
T Consensus 433 v~Fr~~p 439 (522)
T TIGR03799 433 LTYRYVP 439 (522)
T ss_pred EEEEEeC
Confidence 4444333
No 286
>PRK06105 aminotransferase; Provisional
Probab=97.83 E-value=0.0013 Score=66.36 Aligned_cols=147 Identities=10% Similarity=0.148 Sum_probs=80.5
Q ss_pred hHHHHHHhhhcCCeEEEeccc-cccccc--------ee----eeecc--CCch------hhh-hHHHHHhhcc-------
Q psy10669 140 YARFRQICDETDSIMFADMSH-ISGLIA--------GV----KGVTK--TGEK------ILY-DYEEKINNAV------- 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH-~~Gli~--------g~----~~T~~--~Gg~------i~~-~l~~~i~~~~------- 190 (337)
++.++++|+++|++||+|+.| +.|-.+ ++ ...+| .||+ +.. ++.+.+.+..
T Consensus 241 l~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~ 320 (460)
T PRK06105 241 WEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG 320 (460)
T ss_pred HHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccc
Confidence 667889999999999999999 467665 11 11122 1343 222 4555444211
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-----c-
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-----L- 262 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-----~- 262 (337)
+.+++ +.|+-..|+...++..+.+ ++..+++.+..++|.+.|++. .+.++.. -.-.-+.-|.+.... .
T Consensus 321 h~~T~-~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~ 396 (460)
T PRK06105 321 HGFTA-SGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFE 396 (460)
T ss_pred cCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCC
Confidence 11222 3455555555555666543 367889999999999998873 2222210 001122233332111 0
Q ss_pred ----chHHHHHHHhhcCceeccC-cccchhhhh
Q psy10669 263 ----TGSKVELVLEEIAIACNKN-TGISLAAEI 290 (337)
Q Consensus 263 ----~~~~~~~~L~~~gI~v~~~-~girig~~~ 290 (337)
....+...|.+.||.+.+. .-+||.-+.
T Consensus 397 ~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~Ppl 429 (460)
T PRK06105 397 PPGKVGARANAAAHEHGVISRAMGDTLAFCPPL 429 (460)
T ss_pred chhHHHHHHHHHHHHCCeEEEecCCEEEEECCC
Confidence 1234555666789999763 246665443
No 287
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=97.83 E-value=0.0022 Score=63.55 Aligned_cols=156 Identities=12% Similarity=0.099 Sum_probs=84.2
Q ss_pred cEEEEcCcc-cccccChHH---HHHHhhhcCCeEEEeccccc----cc--cc----------eeeeec-c-------CCc
Q psy10669 125 DFLSSGTTC-YSRCLDYAR---FRQICDETDSIMFADMSHIS----GL--IA----------GVKGVT-K-------TGE 176 (337)
Q Consensus 125 klII~~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~----Gl--i~----------g~~~T~-~-------~Gg 176 (337)
.++++++++ .+...+.++ |.++|+++++++++|+++.- |- .. .+.+|. | +-|
T Consensus 173 ~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG 252 (409)
T PLN00143 173 AMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLG 252 (409)
T ss_pred EEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceE
Confidence 456666654 247777554 55778999999999999752 21 11 112222 2 235
Q ss_pred hhhh-h---H------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE-ec
Q psy10669 177 KILY-D---Y------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV-VT 245 (337)
Q Consensus 177 ~i~~-~---l------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v-~~ 245 (337)
+++. + + .+.+.....+... ++.+..++++.++..-....+++.++++.++-+.+.+.|.+.+... ..
T Consensus 253 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 330 (409)
T PLN00143 253 WLVTCDPSGLLQICEIADSIKKALNPAPF--PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQ 330 (409)
T ss_pred EEEeeCchhhhhhHHHHHHHHHHHhccCC--CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 5543 1 2 2233322222212 2334444444444321112456777888888888888888764322 11
Q ss_pred CCCCCeEEEEEecCC---Cc-ch-HHHHHHHhhcCceeccCc
Q psy10669 246 GGTDVHLILIDLRKN---KL-TG-SKVELVLEEIAIACNKNT 282 (337)
Q Consensus 246 ~~t~~h~v~V~~~~~---~~-~~-~~~~~~L~~~gI~v~~~~ 282 (337)
.....-.+++++... +. +. ..+.+.|.+.||.+.+-.
T Consensus 331 ~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 372 (409)
T PLN00143 331 KAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGV 372 (409)
T ss_pred CCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcc
Confidence 122355677888642 22 23 344466678899998743
No 288
>PRK09265 aminotransferase AlaT; Validated
Probab=97.81 E-value=0.012 Score=58.02 Aligned_cols=152 Identities=13% Similarity=0.025 Sum_probs=81.4
Q ss_pred ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccc----c--------ccc---e-eeeec-c-------C
Q psy10669 124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHIS----G--------LIA---G-VKGVT-K-------T 174 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G--------li~---g-~~~T~-~-------~ 174 (337)
+++|++. +++ .+...| +++|.++|+++|+++++|+++.- | +.. . +.++. | +
T Consensus 169 ~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 248 (404)
T PRK09265 169 TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR 248 (404)
T ss_pred ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc
Confidence 5665554 443 246777 66777889999999999998641 1 000 0 11222 2 2
Q ss_pred Cchhhh----h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHH---HHHHHHHHHHHHHHHHhC-CCE
Q psy10669 175 GEKILY----D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY---QAQVKANASHLSDEMIKR-GYH 242 (337)
Q Consensus 175 Gg~i~~----~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y---~~~v~~na~~l~~~L~~~-G~~ 242 (337)
-|+++. + +.+.+... .. ...+++.+...+...++... ..++++ .+++.++.+.+.+.|.+. |++
T Consensus 249 iG~~v~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~ 324 (404)
T PRK09265 249 VGWMVLSGPKKHAKGYIEGLDML-AS-MRLCANVPAQHAIQTALGGY--QSINELILPGGRLYEQRDRAWELLNAIPGVS 324 (404)
T ss_pred eEEEEEeCchHHHHHHHHHHHHH-hc-cccCCCcHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 255542 1 22222211 11 11133344444444444221 112222 246677777888888775 776
Q ss_pred EecCCCCCeEEEEEecCCC----cchHHHHHHHhhcCceecc
Q psy10669 243 VVTGGTDVHLILIDLRKNK----LTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 243 v~~~~t~~h~v~V~~~~~~----~~~~~~~~~L~~~gI~v~~ 280 (337)
+... ..+-.+++.+.... -+...+.+.|.+.||.+.+
T Consensus 325 ~~~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~p 365 (404)
T PRK09265 325 CVKP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQ 365 (404)
T ss_pred ccCC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEEC
Confidence 5532 33556677775421 1344577888889999875
No 289
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=97.81 E-value=0.0019 Score=63.20 Aligned_cols=151 Identities=17% Similarity=0.083 Sum_probs=76.2
Q ss_pred ccEEEEcCcccc----cccC---hHHHHHHhhhcCCeEEEeccccccccce-------------eeeecc--CCchhhhh
Q psy10669 124 FDFLSSGTTCYS----RCLD---YARFRQICDETDSIMFADMSHISGLIAG-------------VKGVTK--TGEKILYD 181 (337)
Q Consensus 124 pklII~~~S~~~----~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g-------------~~~T~~--~Gg~i~~~ 181 (337)
+..||+.+ ..+ ...| +++++++|+++|++||+|+.|+ |+-.| +...+| .||+=++-
T Consensus 163 ~aAvivEp-i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~RtG~~~a~~~~gv~PDiv~~gK~lggG~P~~a 240 (364)
T PRK04013 163 TAAVIFEP-IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS-GLRTGKFLAIEHYKVEPDIVTMGKGIGNGVPVSL 240 (364)
T ss_pred cEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cCCCCchhHHHhcCCCCCEEEecccccCCceeEE
Confidence 45667653 443 3555 7889999999999999999997 54222 111222 23432221
Q ss_pred --HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669 182 --YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 182 --l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~ 259 (337)
..+.+.......++ +.|+-..|+....+..+.+.+ +++|++.....+... + |..--...-++-|.+..
T Consensus 241 ~~~~~~~~~~~~~~T~-~gnp~~~aaa~a~l~~i~~~~-------l~~~~~~~l~~l~~~-~-v~~vRG~Gl~~gve~~~ 310 (364)
T PRK04013 241 TLTNFDVERGKHGSTF-GGNPLACKAVAVTLRILRRER-------LVEKAGEKFIEIKGE-R-VVTTRGRGLMIGIVLKK 310 (364)
T ss_pred EEecccccCCCcCCCC-CcCHHHHHHHHHHHHHHHhcc-------HHHHHHHHHHHhccC-c-ceeeeeCcEEEEEEeCC
Confidence 11122322222223 355566666656666664322 333333332333221 1 11100112344444532
Q ss_pred CCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 260 NKLTGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 260 ~~~~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
....+.+.+.+.|+.+.+.. .||+.-|
T Consensus 311 ---~~~~i~~~~~~~Gll~~~~g~~vlr~~Pp 339 (364)
T PRK04013 311 ---PVGKYVEELQNRGYLVHTAGQRVIRLLPP 339 (364)
T ss_pred ---cHHHHHHHHHhCCcEEeeCCCCEEEEeCC
Confidence 23456666777899997643 5777544
No 290
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=97.79 E-value=0.00081 Score=67.54 Aligned_cols=160 Identities=16% Similarity=0.110 Sum_probs=88.4
Q ss_pred cEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch-----
Q psy10669 125 DFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK----- 177 (337)
Q Consensus 125 klII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~----- 177 (337)
..||+. ..+++ ..+ ++.++++|+++|++||+|+.|+ .|-.+ ++ ...+| .||+
T Consensus 220 Aavi~E-pv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~a 298 (445)
T PRK09221 220 AAVIVE-PMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGA 298 (445)
T ss_pred EEEEEe-cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCccccee
Confidence 466665 36544 344 6678899999999999999995 44323 11 11222 1342
Q ss_pred -hhh-hHHHHHhhc-------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-
Q psy10669 178 -ILY-DYEEKINNA-------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG- 246 (337)
Q Consensus 178 -i~~-~l~~~i~~~-------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~- 246 (337)
+.. ++.+.+... ..+.+++ .|+...++...+++.+.+ +...+++.++.++|++.|++. ++..+..
T Consensus 299 v~~~~~i~~~~~~~~~~~~~~~~~~T~~-~~pl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v 374 (445)
T PRK09221 299 VIASDEIYDAFMQGPEYAIEFFHGYTYS-AHPVACAAGLATLDIYRE---EDLFERAAELAPYFEDAVHSLKGLPHVIDI 374 (445)
T ss_pred eEEcHHHHHhhccCcccccccccccCCC-cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhccCCCEEEE
Confidence 222 454444321 1233454 455556555555655533 256889999999999988874 3332210
Q ss_pred CCCCeEEEEEecCC----CcchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 247 GTDVHLILIDLRKN----KLTGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 247 ~t~~h~v~V~~~~~----~~~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
-...-+.-|.+... ......+.+.|.+.||.+.... .|||.-+
T Consensus 375 rg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~lr~~Pp 422 (445)
T PRK09221 375 RNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTGDTIALSPP 422 (445)
T ss_pred ecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecCCEEEEECC
Confidence 00111222333221 1123456677777899986532 5777533
No 291
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=97.75 E-value=0.0018 Score=65.98 Aligned_cols=158 Identities=9% Similarity=0.093 Sum_probs=85.5
Q ss_pred ccEEE-EcCcc-cccccChHHHH---HHhhhcCCeEEEeccccccccc------------------------eeeeec-c
Q psy10669 124 FDFLS-SGTTC-YSRCLDYARFR---QICDETDSIMFADMSHISGLIA------------------------GVKGVT-K 173 (337)
Q Consensus 124 pklII-~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~------------------------g~~~T~-~ 173 (337)
+|+|+ +++++ .+...+.+++. ++|+++|++|++|+++..=+.. .+..|. |
T Consensus 200 ~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK 279 (496)
T PLN02376 200 VKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSK 279 (496)
T ss_pred eeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccc
Confidence 57455 44544 35777777655 6788999999999998642111 012222 2
Q ss_pred -------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhh-HHH----HHHHHHHHHHHHHHHHh
Q psy10669 174 -------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF-KSY----QAQVKANASHLSDEMIK 238 (337)
Q Consensus 174 -------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~-~~y----~~~v~~na~~l~~~L~~ 238 (337)
+-|+++. .+.+.+.... . .+........+++..+. ..+| +++ ++++.+.-+.+.+.|.+
T Consensus 280 ~~glpGlRvG~li~~~~~l~~~~~~~~-~--~~~vs~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~ 353 (496)
T PLN02376 280 DMGLPGFRVGIVYSFNDSVVSCARKMS-S--FGLVSSQTQLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKK 353 (496)
T ss_pred cCCCCcceEEEEEECCHHHHHHHHHHh-h--cCCCCHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1255544 2434333221 1 11222233333333221 2233 333 66677777888888988
Q ss_pred CCCEEecCCCCCeEEEEEecCCCc------chHHHHH-HHhhcCceeccCc--------ccchhh
Q psy10669 239 RGYHVVTGGTDVHLILIDLRKNKL------TGSKVEL-VLEEIAIACNKNT--------GISLAA 288 (337)
Q Consensus 239 ~G~~v~~~~t~~h~v~V~~~~~~~------~~~~~~~-~L~~~gI~v~~~~--------girig~ 288 (337)
.|+.+... ...-.++++++.... +..++.+ .+++.||.+.+-. .+||+.
T Consensus 354 ~gi~~~~~-~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~f 417 (496)
T PLN02376 354 ADIACLTS-NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICF 417 (496)
T ss_pred CCCcccCC-CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEe
Confidence 88886542 334567888864211 1123334 4456799988743 577753
No 292
>PLN02187 rooty/superroot1
Probab=97.75 E-value=0.0043 Score=62.63 Aligned_cols=158 Identities=9% Similarity=0.047 Sum_probs=86.1
Q ss_pred cEEEEcCcc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c-------CCc
Q psy10669 125 DFLSSGTTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K-------TGE 176 (337)
Q Consensus 125 klII~~~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~-------~Gg 176 (337)
.++++.+++ .+...+. ++|.++|+++|+++++|+++.-=... .+.++. | +-|
T Consensus 207 ~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG 286 (462)
T PLN02187 207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIG 286 (462)
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeE
Confidence 355555654 2466664 45667789999999999987531111 112222 2 235
Q ss_pred hhhh-h------HHHHHhhccCCC-CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE-ecCC
Q psy10669 177 KILY-D------YEEKINNAVFPS-LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV-VTGG 247 (337)
Q Consensus 177 ~i~~-~------l~~~i~~~~~p~-~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v-~~~~ 247 (337)
+++. + +.+.+.....+. +.++++....+++..++.+-.....++.++.+.++.+.+.+.|.+.+... ....
T Consensus 287 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P 366 (462)
T PLN02187 287 WIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKP 366 (462)
T ss_pred EEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCC
Confidence 5543 1 223443332222 22344556666666666431123346778888889999999999865432 1112
Q ss_pred CCCeEEEEEecC---CCc-ch-HHHHHHHhhcCceeccCc
Q psy10669 248 TDVHLILIDLRK---NKL-TG-SKVELVLEEIAIACNKNT 282 (337)
Q Consensus 248 t~~h~v~V~~~~---~~~-~~-~~~~~~L~~~gI~v~~~~ 282 (337)
...--+++.+.. .++ +. ....+.+.+.||.+.+-.
T Consensus 367 ~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~ 406 (462)
T PLN02187 367 ESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGD 406 (462)
T ss_pred CEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECcc
Confidence 233345555532 122 23 334566678899988643
No 293
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=97.75 E-value=0.0079 Score=58.98 Aligned_cols=245 Identities=16% Similarity=0.075 Sum_probs=126.9
Q ss_pred HHHHHHHHHHh-hcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--
Q psy10669 17 ELYSLIKKEKH-RQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL-- 91 (337)
Q Consensus 17 ~~~~~~~~e~~-rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~-- 91 (337)
++..++.+... ..+..+.|-..++-. ++.+++++.+.+.. ...|+. ..|. .++-....+.+.+.+|.
T Consensus 14 ~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~---~~G~---~~lr~aia~~~~~~~~~~~ 85 (393)
T TIGR03538 14 KLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPT---TKGL---PELRQAIARWLERRFDLPT 85 (393)
T ss_pred HHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCC---CCCC---HHHHHHHHHHHHHhhCCcc
Confidence 44455554432 345677777666654 78888888765321 111211 1122 22221111233333343
Q ss_pred --CCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------cc--c-
Q psy10669 92 --DPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NN--A- 122 (337)
Q Consensus 92 --~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~--a- 122 (337)
+.. .+|..++| +++...++.+++++ ++ +
T Consensus 86 ~~~~~---~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 162 (393)
T TIGR03538 86 GVDPE---RHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESV 162 (393)
T ss_pred cCCCC---ceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHH
Confidence 321 15888888 46766666776542 00 1
Q ss_pred --cccEEEEc-Ccc-cccccChH---HHHHHhhhcCCeEEEecccccccc----------------c-------eeeeec
Q psy10669 123 --RFDFLSSG-TTC-YSRCLDYA---RFRQICDETDSIMFADMSHISGLI----------------A-------GVKGVT 172 (337)
Q Consensus 123 --~pklII~~-~S~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli----------------~-------g~~~T~ 172 (337)
++|+|++. +++ .+...+.+ +|.++|+++|+++++|+++.--.. + .+..|.
T Consensus 163 ~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 242 (393)
T TIGR03538 163 WRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSL 242 (393)
T ss_pred hhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecc
Confidence 26777664 433 24666644 455778899999999998752110 0 112222
Q ss_pred -c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669 173 -K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH 242 (337)
Q Consensus 173 -~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~ 242 (337)
| +-|++++ ++.+.+..... ....+.+.+...+...++.. ....+..+++..++.+.+.+.|.+. +.
T Consensus 243 SK~~~~~GlRvG~~i~~~~l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~ 318 (393)
T TIGR03538 243 SKRSNLPGLRSGFVAGDAEILKAFLRYRT-YHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV-LD 318 (393)
T ss_pred hhhcCCcccceEEEecCHHHHHHHHHHHH-hhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-Cc
Confidence 2 1266655 46555543321 11112333333333333321 2234566777777888888888764 33
Q ss_pred EecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCceecc
Q psy10669 243 VVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 243 v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~ 280 (337)
+. .....--+++++. .+..++.+.| ++.||.+.+
T Consensus 319 ~~-~p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~p 353 (393)
T TIGR03538 319 LE-LPDAGFYLWPKVP---GDDEAFARALYEEENVTVLP 353 (393)
T ss_pred cc-CCCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeC
Confidence 32 2244556777776 2445566555 678999854
No 294
>PRK06062 hypothetical protein; Provisional
Probab=97.74 E-value=0.00054 Score=68.92 Aligned_cols=160 Identities=13% Similarity=0.080 Sum_probs=85.1
Q ss_pred cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch-----
Q psy10669 125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK----- 177 (337)
Q Consensus 125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~----- 177 (337)
..||+. .++++. .+ ++.++++|+++|++||+|+.|+ .|=.+ |+ ...+| .||+
T Consensus 216 AaviiE-Pv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Piga 294 (451)
T PRK06062 216 AAILLE-SVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGG 294 (451)
T ss_pred EEEEEc-cccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEE
Confidence 466665 365543 44 5678899999999999999997 22222 11 11112 1343
Q ss_pred -hhh-hHHHHHhhcc--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHH-HHHHHHHHhC--CCEEecC-CCC
Q psy10669 178 -ILY-DYEEKINNAV--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA-SHLSDEMIKR--GYHVVTG-GTD 249 (337)
Q Consensus 178 -i~~-~l~~~i~~~~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na-~~l~~~L~~~--G~~v~~~-~t~ 249 (337)
+.. ++.+.+.... ...+++ .|+...|+..+++..+.+. ...+++.+.. ++|.+.|++. .+.++.. -..
T Consensus 295 v~~~~~i~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~ 370 (451)
T PRK06062 295 VAISEAIAATFADRPYPGGLTYS-GHPLACAAAVATINAMEEE---GIVENAARIGAEVLGPGLRELAERHPSVGEVRGL 370 (451)
T ss_pred EEEcHHHHHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEecc
Confidence 333 5655554321 223444 3566666666666665432 3566666665 4677777662 2222210 001
Q ss_pred CeEEEEEecCCC-----c--------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 250 VHLILIDLRKNK-----L--------TGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 250 ~h~v~V~~~~~~-----~--------~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
.-+.-|.+.... + ....+.+.|.+.||.+.... .+||..+
T Consensus 371 Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lrl~pp 424 (451)
T PRK06062 371 GVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPP 424 (451)
T ss_pred ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeecCCEEEEECC
Confidence 123334432110 0 13456667777899976432 5676544
No 295
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.69 E-value=0.00065 Score=67.75 Aligned_cols=147 Identities=14% Similarity=0.109 Sum_probs=88.1
Q ss_pred ccccChHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--CCchh-h-----h-hHHHHHhhc--
Q psy10669 135 SRCLDYARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--TGEKI-L-----Y-DYEEKINNA-- 189 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--~Gg~i-~-----~-~l~~~i~~~-- 189 (337)
+-...+++++++|+++|++||+|+.| .|+ .+ ++ ...+| .||+. + . ++.+.+...
T Consensus 219 ~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~ 297 (422)
T PRK05630 219 HDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNG 297 (422)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCC
Confidence 34455678999999999999999999 555 11 11 11123 14532 2 2 455554321
Q ss_pred ----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCCcc
Q psy10669 190 ----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNKLT 263 (337)
Q Consensus 190 ----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~~~ 263 (337)
....++ +.|+...++...++..+.+ + ...+++.++.++|.+.|++. .+..+. --....++.|.+.... +
T Consensus 298 ~~~~~h~~T~-~g~Pla~aaa~aaL~~l~~-~--~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~-~ 372 (422)
T PRK05630 298 GGALMHGPTF-MANPLACAVAHASLEIIET-G--MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV-D 372 (422)
T ss_pred CCccccCCCC-cCCHHHHHHHHHHHHHHHh-C--cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc-c
Confidence 112223 4666777777677766643 2 44679999999999988752 122121 0123677778776532 3
Q ss_pred hHHHHHHHhhcCceeccCc-ccchh
Q psy10669 264 GSKVELVLEEIAIACNKNT-GISLA 287 (337)
Q Consensus 264 ~~~~~~~L~~~gI~v~~~~-girig 287 (337)
...+...|.+.|+.+.... -+||.
T Consensus 373 ~~~~~~~~~~~Gl~~~~~g~~l~~~ 397 (422)
T PRK05630 373 MEEATQAAVDHGVWLRPFGRLVYVM 397 (422)
T ss_pred HHHHHHHHHHCCeEEEecCCEEEEE
Confidence 5567777888899987532 45554
No 296
>PTZ00377 alanine aminotransferase; Provisional
Probab=97.67 E-value=0.019 Score=58.13 Aligned_cols=157 Identities=15% Similarity=0.073 Sum_probs=82.3
Q ss_pred cccE-EEEcCcc-cccccC---hHHHHHHhhhcCCeEEEeccccc----c---ccc------e----------e--eeec
Q psy10669 123 RFDF-LSSGTTC-YSRCLD---YARFRQICDETDSIMFADMSHIS----G---LIA------G----------V--KGVT 172 (337)
Q Consensus 123 ~pkl-II~~~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G---li~------g----------~--~~T~ 172 (337)
++|+ +++++++ .+...+ .++|.++|+++|+++++|+++.- + ... . + .++.
T Consensus 218 ~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~ 297 (481)
T PTZ00377 218 TPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHST 297 (481)
T ss_pred CeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecC
Confidence 3565 4455544 347777 45566788999999999998742 1 000 0 1 1111
Q ss_pred -c--------CCchhh----h-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hc-------hhhHHHHHHHHHHH
Q psy10669 173 -K--------TGEKIL----Y-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QS-------DEFKSYQAQVKANA 229 (337)
Q Consensus 173 -~--------~Gg~i~----~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~-------~~~~~y~~~v~~na 229 (337)
| +.|+++ . ++.+.+.....+. . +++.....+.+.++..- .. .+.+..+++..++.
T Consensus 298 SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~-~-~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr 375 (481)
T PTZ00377 298 SKGIIGECGRRGGYFELTNIPPEVREQIYKLASIN-L-CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRA 375 (481)
T ss_pred CcccccCCcCceEEEEEeCCCHHHHHHHHHHhhee-c-CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 2 336664 2 4666665543221 2 34445555555554210 00 11122223456777
Q ss_pred HHHHHHHHhC-CCEEecCCCCCeEEEEEecC-CCc-----------chHHHHHHHhhcCceeccCc
Q psy10669 230 SHLSDEMIKR-GYHVVTGGTDVHLILIDLRK-NKL-----------TGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 230 ~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~-~~~-----------~~~~~~~~L~~~gI~v~~~~ 282 (337)
+.+.+.|.+. |+.+... ...--+++++.. .+. +...+...|++.||.+.+-.
T Consensus 376 ~~l~~~L~~~~g~~~~~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~ 440 (481)
T PTZ00377 376 ELLTDELNKIEGVSCQPV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGS 440 (481)
T ss_pred HHHHHHHhcCCCcEeecC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCc
Confidence 7888888875 8887642 122344555531 111 11234567788899987633
No 297
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.66 E-value=0.0012 Score=65.94 Aligned_cols=148 Identities=9% Similarity=0.067 Sum_probs=82.9
Q ss_pred cEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEecccccc-c--cc-----ee----eeec-------cCCchh
Q psy10669 125 DFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSHISG-L--IA-----GV----KGVT-------KTGEKI 178 (337)
Q Consensus 125 klII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH~~G-l--i~-----g~----~~T~-------~~Gg~i 178 (337)
..||+. ..+++ ..+ +++|+++|+++|++||+|+.|+.. . .+ |+ +..+ |-|+++
T Consensus 202 aavi~E-Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~gK~lggG~Pi~av~ 280 (428)
T PRK12389 202 AAVLVE-PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYG 280 (428)
T ss_pred EEEEEe-CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeeechhhcCCCceeEEe
Confidence 456664 35544 344 678999999999999999999731 1 11 11 1112 234443
Q ss_pred hh-hHHHHHhh--ccCC-CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCC--EEecCCC
Q psy10669 179 LY-DYEEKINN--AVFP-SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGY--HVVTGGT 248 (337)
Q Consensus 179 ~~-~l~~~i~~--~~~p-~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~--~v~~~~t 248 (337)
.. ++.+.+.+ ..+. +++ +.|+...|+..+.+..+.+ ....+++.++.++|.+.|++ .++ ++..+.
T Consensus 281 ~~~~i~~~~~~~~~~~~~~T~-~gnpl~~Aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~- 355 (428)
T PRK12389 281 GRKDIMEQVAPLGPAYQAGTM-AGNPASMAAGIACLEVLQQ---EGVYEKLDRLGAMLEEGILEAAEKHGITITINRLK- 355 (428)
T ss_pred EHHHHHhhhccCCCcccccCC-ccCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC-
Confidence 33 56555532 1111 222 3555666666566665533 24778899999999999886 343 222211
Q ss_pred CCeEEEEEecCCCc------------chHHHHHHHhhcCceecc
Q psy10669 249 DVHLILIDLRKNKL------------TGSKVELVLEEIAIACNK 280 (337)
Q Consensus 249 ~~h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~ 280 (337)
. ++-|.+..... ....+.+.|.+.||.+.+
T Consensus 356 -g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 397 (428)
T PRK12389 356 -G-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAP 397 (428)
T ss_pred -c-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeec
Confidence 1 33344432211 123455666678999875
No 298
>PRK07568 aspartate aminotransferase; Provisional
Probab=97.66 E-value=0.016 Score=56.64 Aligned_cols=151 Identities=11% Similarity=0.055 Sum_probs=81.1
Q ss_pred ccEEEEc-Ccc-ccccc---ChHHHHHHhhhcCCeEEEeccccc----c-----ccc--------eeeeec-c-------
Q psy10669 124 FDFLSSG-TTC-YSRCL---DYARFRQICDETDSIMFADMSHIS----G-----LIA--------GVKGVT-K------- 173 (337)
Q Consensus 124 pklII~~-~S~-~~~~~---d~~~l~eia~~~ga~l~vD~AH~~----G-----li~--------g~~~T~-~------- 173 (337)
+++|++. +++ .+... ++++|.++|+++|+++++|+++.- | +.. .++.+. |
T Consensus 163 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~ 242 (397)
T PRK07568 163 TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGA 242 (397)
T ss_pred ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCc
Confidence 4666554 433 23444 466777889999999999999741 1 000 112222 2
Q ss_pred CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCC
Q psy10669 174 TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTD 249 (337)
Q Consensus 174 ~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~ 249 (337)
+-|++++ ++.+.+....... .+.+ .....+++.++..- +...++.++.+.++.+.+.+.|.+. |+.+... ..
T Consensus 243 R~G~~~~~~~~~~~~~~~~~~~~-~~~s-~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p-~g 318 (397)
T PRK07568 243 RIGCLISKNKELIAAAMKLCQAR-LSPP-TLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP-KG 318 (397)
T ss_pred ceEEEecCCHHHHHHHHHHhhcc-CCCC-cHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-Cc
Confidence 2355543 3544443222221 2222 23333444444321 2234566777888888899999875 6665432 33
Q ss_pred CeEEEEEecCCCcchHHHHHHHhh------cCceecc
Q psy10669 250 VHLILIDLRKNKLTGSKVELVLEE------IAIACNK 280 (337)
Q Consensus 250 ~h~v~V~~~~~~~~~~~~~~~L~~------~gI~v~~ 280 (337)
+..+++.+... +..++.+.|.+ .||.+.+
T Consensus 319 ~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~p 353 (397)
T PRK07568 319 AFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAP 353 (397)
T ss_pred ceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeC
Confidence 44567777542 45566666542 5887765
No 299
>PRK06836 aspartate aminotransferase; Provisional
Probab=97.66 E-value=0.064 Score=52.69 Aligned_cols=64 Identities=11% Similarity=0.072 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc------ccchhh
Q psy10669 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT------GISLAA 288 (337)
Q Consensus 222 ~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------girig~ 288 (337)
++...++-+.+.+.|.+.|+.+... ..+..+++.+.. . +..++.+.|.+.||.+.+.. ++||+.
T Consensus 302 ~~~~~~~r~~l~~~L~~~g~~~~~~-~gg~~~~~~~~~-~-~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~ 371 (394)
T PRK06836 302 VSIYKRNRDLLYDGLTELGFECVKP-QGAFYLFPKSPE-E-DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSY 371 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCEeecC-CceEEEEEeCCC-C-CHHHHHHHHHhCCEEEECchhcCCCCeEEEEe
Confidence 4455667777888888889887642 234455665544 2 66777788888899988743 577764
No 300
>PRK06541 hypothetical protein; Provisional
Probab=97.65 E-value=0.001 Score=67.16 Aligned_cols=161 Identities=19% Similarity=0.205 Sum_probs=90.6
Q ss_pred cEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEeccc-cccccc--------ee----eeec--------cCCc
Q psy10669 125 DFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSH-ISGLIA--------GV----KGVT--------KTGE 176 (337)
Q Consensus 125 klII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH-~~Gli~--------g~----~~T~--------~~Gg 176 (337)
..||+. .++++ ..+ +++|+++|+++|++||+|+.| +.|-.+ ++ ...+ |.|+
T Consensus 223 Aavi~E-Pv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~piga 301 (460)
T PRK06541 223 AAVFLE-PVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGA 301 (460)
T ss_pred EEEEEC-CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeE
Confidence 456665 35443 334 677999999999999999999 566544 11 1111 3344
Q ss_pred hhhh-hHHHHHhhc--cCC-CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCC
Q psy10669 177 KILY-DYEEKINNA--VFP-SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDV 250 (337)
Q Consensus 177 ~i~~-~l~~~i~~~--~~p-~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~ 250 (337)
++.. ++.+.+... .+. +.+-+.|+...|+....+..+.+ ....+++.++.++|.+.|.+. .+.++. --...
T Consensus 302 v~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~G 378 (460)
T PRK06541 302 MIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER---EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDG 378 (460)
T ss_pred EEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence 4444 455544321 111 11223455565555555555432 256789999999999999884 233221 01244
Q ss_pred eEEEEEecCCC-----cc--------hHHHHHHHhhcCceeccC----cccchhhh
Q psy10669 251 HLILIDLRKNK-----LT--------GSKVELVLEEIAIACNKN----TGISLAAE 289 (337)
Q Consensus 251 h~v~V~~~~~~-----~~--------~~~~~~~L~~~gI~v~~~----~girig~~ 289 (337)
.+.-|.+.... ++ ...+.+.|.+.||.+... .-|||..+
T Consensus 379 l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Pp 434 (460)
T PRK06541 379 YFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPP 434 (460)
T ss_pred eEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECC
Confidence 55556653211 00 023455666789999753 14777654
No 301
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=97.60 E-value=0.00086 Score=64.71 Aligned_cols=124 Identities=13% Similarity=0.036 Sum_probs=88.5
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN 109 (337)
.+...+..+..|.-.....+..- +.-+ ..|+.-+|. +|...+.+| +|++.+=|--. .+.+.||..|.
T Consensus 24 ara~PIyqtTsy~F~d~~haa~l-F~l~-~~G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~ 90 (426)
T COG2873 24 ARAVPIYQTTSYVFDDTDHAAAL-FGLK-EPGNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAI 90 (426)
T ss_pred ceecceeeeeeeecCCHHHHHHH-hCCC-cCCceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHH
Confidence 34567788888885555444432 2222 246666776 566678888 58888877653 58888999998
Q ss_pred HHHHHhhCCc----------------------------------------ccc---cccEEEEcCcccc--cccChHHHH
Q psy10669 110 FAVCEKALPT----------------------------------------NNA---RFDFLSSGTTCYS--RCLDYARFR 144 (337)
Q Consensus 110 ~~v~~aLl~~----------------------------------------~~a---~pklII~~~S~~~--~~~d~~~l~ 144 (337)
..++..|+++ +.+ ++|+|.+..-.+| ...|++.+.
T Consensus 91 ~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia 170 (426)
T COG2873 91 TYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIA 170 (426)
T ss_pred HHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCCccccCHHHHH
Confidence 8888998764 111 2789988644454 789999999
Q ss_pred HHhhhcCCeEEEeccccccccc
Q psy10669 145 QICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+||+++|++|+||-.=..+.+.
T Consensus 171 ~iAh~~gvpliVDNT~atpyl~ 192 (426)
T COG2873 171 EIAHRHGVPLIVDNTFATPYLC 192 (426)
T ss_pred HHHHHcCCcEEEecCCCcceec
Confidence 9999999999999986666544
No 302
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.59 E-value=0.00069 Score=73.86 Aligned_cols=158 Identities=10% Similarity=0.121 Sum_probs=98.3
Q ss_pred CcccccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeeecc-----C------Cchhhh--hHHHHHhh
Q psy10669 131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGVTK-----T------GEKILY--DYEEKINN 188 (337)
Q Consensus 131 ~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T~~-----~------Gg~i~~--~l~~~i~~ 188 (337)
++.++...|+++|.++||+.|++++||+.|.++.+. | ++++++ . -||+.. ++...+..
T Consensus 215 p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpg 294 (954)
T PRK05367 215 PGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPG 294 (954)
T ss_pred CCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCC
Confidence 556788889999999999999999999988544333 1 233321 1 245433 34332211
Q ss_pred c---------cCC--------------CCCCCCcHHHHHHHHHHH-----HHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669 189 A---------VFP--------------SLQGGPHNHAIGAIATAM-----LQAQSDEFKSYQAQVKANASHLSDEMIKRG 240 (337)
Q Consensus 189 ~---------~~p--------------~~~g~~~~~~iaala~a~-----~e~~~~~~~~y~~~v~~na~~l~~~L~~~G 240 (337)
. -.| .-.+|+|....-++.+.+ .++.....++.++++..++.+|+++|.+.|
T Consensus 295 rivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G 374 (954)
T PRK05367 295 RIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG 374 (954)
T ss_pred CeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 000 012455554322222221 333334557889999999999999999999
Q ss_pred CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhhHh
Q psy10669 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEIQA 292 (337)
Q Consensus 241 ~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~~t 292 (337)
+++... ..-..+.+.+. .+..++.++|.+.||.+.... .+||...+.+
T Consensus 375 ~~~~~~-~~f~~~~~~~~---~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~ 424 (954)
T PRK05367 375 LEVVHD-SFFDTLTVEVG---GDAAAVLARALAAGINLRRVDDDHVGISLDETT 424 (954)
T ss_pred cccCCC-CCCCeEEEeCC---CCHHHHHHHHHHCCceeccccCCEEEEEecccC
Confidence 998753 22245555543 267888999999999986543 6777655544
No 303
>KOG0053|consensus
Probab=97.56 E-value=0.0016 Score=63.93 Aligned_cols=155 Identities=12% Similarity=0.071 Sum_probs=99.2
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...+.+| +.++++-|+++ .+.|.||..|-..++..|+++
T Consensus 75 ~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~ 145 (409)
T KOG0053|consen 75 GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGD 145 (409)
T ss_pred CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceee
Confidence 566778888 47788999986 699999998877778888765
Q ss_pred --------ccc-----cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eec---
Q psy10669 120 --------NNA-----RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVT--- 172 (337)
Q Consensus 120 --------~~a-----~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~--- 172 (337)
..+ +.++|.+. +++ +....|+++++++||++|++++||.+-..++.- | ++ |.+
T Consensus 146 ~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi 225 (409)
T KOG0053|consen 146 FVDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYI 225 (409)
T ss_pred eechhhHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeee
Confidence 111 25777776 444 458999999999999999999999997777544 2 22 322
Q ss_pred --c---CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 173 --K---TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 173 --~---~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
| -||.++. ++.+++.... -.+.+++++-..-=+...+ +...-++++--+|+..+++.|...
T Consensus 226 ~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~lg~~~~p~~~~ll~Rgl-----ktl~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 226 GGHSDVIGGSVVLNSEELASRLKFLQ-EDLGWCEDPFDLFLLSRGL-----KTLHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred cCCcceeeeEEecCcHHHHHHHHHHH-HHhcCCCCHHHHHHHhcCc-----chhhhhHHHHHHHHHHHHHHhhhC
Confidence 2 2555543 4555444332 1222233332221111111 123355677778888888888873
No 304
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=97.56 E-value=0.0063 Score=60.90 Aligned_cols=161 Identities=12% Similarity=0.085 Sum_probs=84.7
Q ss_pred ccEEEEcCcccc-------cccChHHHHHHhhhcCCeEEEeccccc-cccc--------e----eeeecc-C-Cchhh--
Q psy10669 124 FDFLSSGTTCYS-------RCLDYARFRQICDETDSIMFADMSHIS-GLIA--------G----VKGVTK-T-GEKIL-- 179 (337)
Q Consensus 124 pklII~~~S~~~-------~~~d~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g----~~~T~~-~-Gg~i~-- 179 (337)
|..||+. ...+ -..=++++++||+++|++||+|+-|+- |=.| | +....| - ||+=+
T Consensus 223 vAaiI~E-pIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~a 301 (447)
T COG0160 223 VAAIIIE-PIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSA 301 (447)
T ss_pred eeEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCCceeE
Confidence 5677775 2332 222245688999999999999999862 3322 1 111112 1 23333
Q ss_pred ---h-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeE
Q psy10669 180 ---Y-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHL 252 (337)
Q Consensus 180 ---~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~ 252 (337)
. ++.+ ..+..+.+++++ |+...|+..+.++.+.+ +...++..+.-++|.++|.+ .-+..+++ -.-.-+
T Consensus 302 vv~r~ei~~-~~~g~~~~Tf~G-Npva~Aaa~AvL~vie~---e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm 376 (447)
T COG0160 302 VVGRAEIMD-WPPGGHGGTFGG-NPVACAAALAVLDVIEE---ENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLM 376 (447)
T ss_pred EeccHHhcc-cCCcccCCCCCc-CHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceE
Confidence 2 3433 333444455544 44444444444554532 26777777888888888876 33444431 112234
Q ss_pred EEEEecCCC----cchHHHH---HHHhhcCceeccCc----ccchhhhh
Q psy10669 253 ILIDLRKNK----LTGSKVE---LVLEEIAIACNKNT----GISLAAEI 290 (337)
Q Consensus 253 v~V~~~~~~----~~~~~~~---~~L~~~gI~v~~~~----girig~~~ 290 (337)
+-|.+.... -++.... +.+.+.|+.+.... .|||--|.
T Consensus 377 ~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL 425 (447)
T COG0160 377 IGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPL 425 (447)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCc
Confidence 445544321 2334333 44445688765443 67776553
No 305
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=97.56 E-value=0.0023 Score=64.23 Aligned_cols=146 Identities=13% Similarity=0.112 Sum_probs=80.5
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc----hhhh--hHHHHHhhccCCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE----KILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg----~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
++.++++|+++|++||+|+.|+ .|-.+ + +...+| .|| .+++ ++.+.++.... ..+.+.
T Consensus 230 l~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~-~~T~~~ 308 (445)
T PRK08593 230 FEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAH-LFTTGA 308 (445)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhccCCC-CCCCCC
Confidence 6678999999999999999984 43322 1 111122 123 2222 56555543211 223345
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC---C----cchHHHH
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN---K----LTGSKVE 268 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~---~----~~~~~~~ 268 (337)
++...|+..+++..+.+ ++..+++.++.++|.+.|.+. .+.++.. -...-++-+.+... . .....+.
T Consensus 309 ~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~ 385 (445)
T PRK08593 309 NPVSCAAALATIDMIED---ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKIC 385 (445)
T ss_pred CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHH
Confidence 66666666666666543 257888999999999998862 2332220 00111222333211 0 1234566
Q ss_pred HHHhhcCceeccCc--ccchhhh
Q psy10669 269 LVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 269 ~~L~~~gI~v~~~~--girig~~ 289 (337)
..|.+.||.+.... -+|+..+
T Consensus 386 ~~~~~~Gv~~~~~~~~~lr~~p~ 408 (445)
T PRK08593 386 NYCFEHGVVIIAVAGNVLRFQPP 408 (445)
T ss_pred HHHHHCCeEEeccCCCEEEEECC
Confidence 66777899986532 4666544
No 306
>PRK07046 aminotransferase; Validated
Probab=97.54 E-value=0.0037 Score=62.99 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=56.4
Q ss_pred hHHHHHHhhhcCCeEEEeccccc--cccc-----e----eeeecc--CCch-----hhh-hHHHHHhhcc---------C
Q psy10669 140 YARFRQICDETDSIMFADMSHIS--GLIA-----G----VKGVTK--TGEK-----ILY-DYEEKINNAV---------F 191 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~--Gli~-----g----~~~T~~--~Gg~-----i~~-~l~~~i~~~~---------~ 191 (337)
++.++++|+++|++||+|+-|+. |+-+ | ++..+| .||+ +.. ++.+.+.+.. .
T Consensus 241 l~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~ 320 (453)
T PRK07046 241 HEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGI 320 (453)
T ss_pred HHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCcee
Confidence 46789999999999999999973 2222 1 111223 1343 222 5555554211 1
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
.+++ +.|+..+|+..+.+..+.+ ++..+++.+..++|+++|++
T Consensus 321 ~~T~-~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 321 GTTL-SANALAMAAMRATLAEVMT---EAAYAHMLALAARLAAGLRA 363 (453)
T ss_pred CCCC-cccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHH
Confidence 1122 3455566665555655533 24577888889999888875
No 307
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.54 E-value=7.9e-05 Score=72.05 Aligned_cols=177 Identities=15% Similarity=0.177 Sum_probs=41.1
Q ss_pred CCCHHHHHHHhhhhhhccCC-------CCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669 41 FTSLAVLECLGSCLQNKYSE-------GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC 113 (337)
Q Consensus 41 ~~~p~V~~a~~~~l~~~y~~-------g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~ 113 (337)
.+++++.+++... ...|+. |..|+|+ +.+| +.++.++|++. .+...++..|.+-++
T Consensus 17 ~l~~~a~~a~~~~-a~~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAea-----A~VvNnnaAAv~L~l 79 (367)
T PF03841_consen 17 PLSEEAIEAVAEV-ASGYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEA-----ALVVNNNAAAVLLAL 79 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccc-cccccccccccccccccccc-------cccc----ccccccccccc-----ccccccccccccccc
Confidence 3577788877653 233422 3344443 2355 46688999997 466667778877777
Q ss_pred HhhCCc--------------------------------------------ccc---cccEE-EEcCcccc-----cccCh
Q psy10669 114 EKALPT--------------------------------------------NNA---RFDFL-SSGTTCYS-----RCLDY 140 (337)
Q Consensus 114 ~aLl~~--------------------------------------------~~a---~pklI-I~~~S~~~-----~~~d~ 140 (337)
.++.+. +.+ ++.+| -+-.|+|- -..+.
T Consensus 80 ~~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~ 159 (367)
T PF03841_consen 80 NTLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSL 159 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccH
Confidence 888542 222 14444 44347773 35678
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc-------------------e---eeeec------cCCchhhh--hHHHHHhh--
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA-------------------G---VKGVT------KTGEKILY--DYEEKINN-- 188 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~-------------------g---~~~T~------~~Gg~i~~--~l~~~i~~-- 188 (337)
+++.++|+++|.++|+|.+ +|++- | ++|.+ |+.|+|++ ++.++++.
T Consensus 160 ~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~p 237 (367)
T PF03841_consen 160 EELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHP 237 (367)
T ss_dssp -HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCC
Confidence 8999999999999999998 44332 1 45554 67899987 67776653
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhchhh-----------HHHHHHHHHHHHHHHHHHHhC
Q psy10669 189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEF-----------KSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~-----------~~y~~~v~~na~~l~~~L~~~ 239 (337)
-.++.. ..-..+|+|..+++.-..++. .+-.+.+.+.|+.|...|...
T Consensus 238 l~Ralr---vdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 238 LGRALR---VDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HTTT-B-----HHHHHHHHHHHHH--------------------------------------
T ss_pred CcceEe---eCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 233322 334678888888876553111 122446666777777777764
No 308
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=97.54 E-value=0.0018 Score=64.96 Aligned_cols=157 Identities=14% Similarity=0.156 Sum_probs=87.5
Q ss_pred cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--CCc----h
Q psy10669 125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--TGE----K 177 (337)
Q Consensus 125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--~Gg----~ 177 (337)
..||+. ..++ +..+ +++++++|+++|+++++|+.|+ |+ .+ ++ ...+| .|| .
T Consensus 223 aavi~E-pv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~~K~l~~G~p~ga 300 (441)
T PRK05769 223 AAIIVE-PIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGA 300 (441)
T ss_pred EEEEEC-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEEcccccCCcccEE
Confidence 455554 3554 3345 7789999999999999999998 43 22 11 11112 123 2
Q ss_pred hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCeE
Q psy10669 178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVHL 252 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h~ 252 (337)
++. ++.+... .....++++ ++...++...++..+. + ...+++.++.++|++.|.+.. +.++.. .....+
T Consensus 301 v~~~~~i~~~~~-~~~~~T~~g-~p~~~aaa~a~L~~l~--~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~ 374 (441)
T PRK05769 301 VIGRAELMFLPP-GSHANTFGG-NPVAAAAALATLEELE--E--GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLM 374 (441)
T ss_pred EEEehhhhhcCC-CCCCCCCCc-CHHHHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEE
Confidence 222 3433222 122233443 5666666656665553 2 668889999999999998742 333321 112345
Q ss_pred EEEEecCCC-----cchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 253 ILIDLRKNK-----LTGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 253 v~V~~~~~~-----~~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
+.|.+.... .....+.+.|.+.||.+.+.. .+|+..+
T Consensus 375 ~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~ 418 (441)
T PRK05769 375 IGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPP 418 (441)
T ss_pred EEEEeccCCccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCC
Confidence 555553321 012345566667799987532 5666543
No 309
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=97.48 E-value=0.0036 Score=61.21 Aligned_cols=172 Identities=13% Similarity=0.054 Sum_probs=107.3
Q ss_pred ccceeeec-------cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceee
Q psy10669 30 INGIELIA-------SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQ 101 (337)
Q Consensus 30 ~~~i~l~a-------sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~ 101 (337)
++-||++. --+..+|++++++... .+.|.+ - .++-++ ...+++=..+ +.++.++|++. .+.
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~-~~~~v~--L--e~~l~~g~~~~R~~~~~-~~~~~~~~aea-----~~i 88 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEA-MRAPVE--L--ETDLKTGKRGARLTELA-ELLCGLTGAEA-----AAI 88 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHH-hcccce--e--eeecccchhhHHHHHHH-HHHhcccchhh-----eee
Confidence 45566655 3345599999998765 333321 1 333333 3344443333 47778888886 456
Q ss_pred cCCCchhHHHHHHhhCCc-------------------------------------------ccc---cccEEEEc-Cccc
Q psy10669 102 PYSGSPANFAVCEKALPT-------------------------------------------NNA---RFDFLSSG-TTCY 134 (337)
Q Consensus 102 ~~Sgt~AN~~v~~aLl~~-------------------------------------------~~a---~pklII~~-~S~~ 134 (337)
++..+.|.+.+..++.++ +.+ +++++.-- .++|
T Consensus 89 vnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~ 168 (395)
T COG1921 89 VNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNY 168 (395)
T ss_pred ECCcHHHHHHHHhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCCeeEEEEeeccc
Confidence 666678888888888642 112 13333322 3556
Q ss_pred ccccChH--HHHHHhhhcCCeEEEecccccccc-----------c-e---e-eeec-----cCCchhhh--hHHHHHhhc
Q psy10669 135 SRCLDYA--RFRQICDETDSIMFADMSHISGLI-----------A-G---V-KGVT-----KTGEKILY--DYEEKINNA 189 (337)
Q Consensus 135 ~~~~d~~--~l~eia~~~ga~l~vD~AH~~Gli-----------~-g---~-~~T~-----~~Gg~i~~--~l~~~i~~~ 189 (337)
++..++. ++.+||+++|++++||.+- |.. + | | .|+. |++|+|++ ++.+++++.
T Consensus 169 ~f~~~l~~~~l~~ia~~~~lpvivD~aS--g~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~ 246 (395)
T COG1921 169 GFTGMLSEEELVEIAHEKGLPVIVDLAS--GALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSH 246 (395)
T ss_pred cccccccHHHHHHHHHHcCCCEEEecCC--ccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHHHhh
Confidence 7666655 4999999999999999994 332 1 2 2 3332 67999997 788877643
Q ss_pred --cCCCCCCCCcHHHHHHHHHHHHHHhchh
Q psy10669 190 --VFPSLQGGPHNHAIGAIATAMLQAQSDE 217 (337)
Q Consensus 190 --~~p~~~g~~~~~~iaala~a~~e~~~~~ 217 (337)
-|+. -...+.+||+..+++....++
T Consensus 247 ~l~Ral---rv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 247 PLKRAL---RVDKETLAALEAALELYLQPE 273 (395)
T ss_pred hhhhhh---hcCcHhHHHHHHHHHHHcCch
Confidence 2332 234588999999998887654
No 310
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0027 Score=62.42 Aligned_cols=194 Identities=15% Similarity=0.183 Sum_probs=124.5
Q ss_pred HHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----------------C-------c------------------
Q psy10669 81 AQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----------------P-------T------------------ 119 (337)
Q Consensus 81 ~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----------------~-------~------------------ 119 (337)
.++-+++.-|.+. +.+||.+|.+.-.+-+..+- + |
T Consensus 114 Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~ 189 (496)
T COG1003 114 LQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDEN 189 (496)
T ss_pred HHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCC
Confidence 3467889999997 78999999886544444440 0 0
Q ss_pred ---------ccc--c-ccEEEEcCcccc-cccChHHHHHHhhhcCCeEEEeccccccccc----e-----e-------ee
Q psy10669 120 ---------NNA--R-FDFLSSGTTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----G-----V-------KG 170 (337)
Q Consensus 120 ---------~~a--~-pklII~~~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-----~-------~~ 170 (337)
.++ + -.+.|+.+|-.+ +.-|+.+|.+|.++.|..|++|.|..-++++ | + +|
T Consensus 190 G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHKTF 269 (496)
T COG1003 190 GNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHKTF 269 (496)
T ss_pred CCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeeccccc
Confidence 111 1 346666688887 8999999999999999999999999998888 1 1 23
Q ss_pred eccCC------chh-hh-hHHHHHhh----------c----------cCCCCCCCCcHHHHHHHHHHHHHHhchh-hHHH
Q psy10669 171 VTKTG------EKI-LY-DYEEKINN----------A----------VFPSLQGGPHNHAIGAIATAMLQAQSDE-FKSY 221 (337)
Q Consensus 171 T~~~G------g~i-~~-~l~~~i~~----------~----------~~p~~~g~~~~~~iaala~a~~e~~~~~-~~~y 221 (337)
+.|.| |=| +. .|.+.+-. . +....+|+.....++ -+...++-++ .+.-
T Consensus 270 ~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a---~~YI~~mG~~GL~~a 346 (496)
T COG1003 270 CIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIA---WAYIRMMGADGLKQA 346 (496)
T ss_pred ccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHH---HHHHHHHhHHHHHHH
Confidence 33322 112 11 22221110 0 000113333333332 2222233223 3555
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEecCCC--CCeEEEEEec----CCCcchHHHHHHHhhcCceeccCc
Q psy10669 222 QAQVKANASHLSDEMIKRGYHVVTGGT--DVHLILIDLR----KNKLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 222 ~~~v~~na~~l~~~L~~~G~~v~~~~t--~~h~v~V~~~----~~~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
-+.-+-||+|++++|+. .|++...+. .-|=.++|.+ ..|++..+++++|-.+|+......
T Consensus 347 se~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~ 412 (496)
T COG1003 347 SEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMY 412 (496)
T ss_pred HHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCccc
Confidence 66778899999999987 577755333 5788899988 678999999999999999876433
No 311
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=97.40 E-value=0.046 Score=53.63 Aligned_cols=233 Identities=12% Similarity=0.049 Sum_probs=123.0
Q ss_pred cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC---CCCCcceeecC
Q psy10669 29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD---PEQWGCNVQPY 103 (337)
Q Consensus 29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~---~~~~~~~v~~~ 103 (337)
.+..|.|...++.. ++.+++++...+... ..|+- ..|.. ++-....+.+.+.+|.+ ++ .+|..+
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~~~~---~~i~it 96 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPT---TAGLP---ALREAIAAWLERRYGLPALDPA---TQVLPV 96 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCC---CCCCH---HHHHHHHHHHHHHhCCCcCCcc---ceEEEC
Confidence 45677777777644 777888886543211 11211 12222 22211112334445643 21 157777
Q ss_pred CC-chhHHHHHHhhCCc--------------------------------------------cc-----ccccEEEEc-Cc
Q psy10669 104 SG-SPANFAVCEKALPT--------------------------------------------NN-----ARFDFLSSG-TT 132 (337)
Q Consensus 104 Sg-t~AN~~v~~aLl~~--------------------------------------------~~-----a~pklII~~-~S 132 (337)
+| +++...++.+++++ .+ .++|+|++. +.
T Consensus 97 ~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~ 176 (396)
T PRK09147 97 NGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPG 176 (396)
T ss_pred CChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCC
Confidence 88 56777777776421 01 026777764 42
Q ss_pred c-cccccChHH---HHHHhhhcCCeEEEeccccccc----------c-----------c--eeeeec-c-------CCch
Q psy10669 133 C-YSRCLDYAR---FRQICDETDSIMFADMSHISGL----------I-----------A--GVKGVT-K-------TGEK 177 (337)
Q Consensus 133 ~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gl----------i-----------~--g~~~T~-~-------~Gg~ 177 (337)
+ .+...+-++ |.++|++++++|++|+++.--. + . .+..|. | +-|+
T Consensus 177 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~ 256 (396)
T PRK09147 177 NPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGF 256 (396)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeee
Confidence 2 246666555 4467789999999999975311 0 0 112222 2 2266
Q ss_pred hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE
Q psy10669 178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI 255 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V 255 (337)
+++ ++.+.+..... ....+.+....++...++.. ....++.++++.++.+.+.+.|.+. +.+.. ...+-.+++
T Consensus 257 ~~~~~~l~~~~~~~~~-~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-p~~g~f~~~ 331 (396)
T PRK09147 257 VAGDAALLKKFLLYRT-YHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV-LDVQL-PDAGFYLWA 331 (396)
T ss_pred ecCCHHHHHHHHHHhh-hcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh-cCCCC-CCeeEEEEE
Confidence 665 46555543221 11123333444443333321 2233556777777888888888764 44432 234556778
Q ss_pred EecCCCcchHHHHHH-HhhcCceecc
Q psy10669 256 DLRKNKLTGSKVELV-LEEIAIACNK 280 (337)
Q Consensus 256 ~~~~~~~~~~~~~~~-L~~~gI~v~~ 280 (337)
++. .+..++.+. |++.||.+.+
T Consensus 332 ~~~---~~~~~~~~~ll~~~gv~v~p 354 (396)
T PRK09147 332 KVP---GDDTEFARRLYADYNVTVLP 354 (396)
T ss_pred ECC---CCHHHHHHHHHHhCCEEEeC
Confidence 876 234555555 4678998865
No 312
>PRK08354 putative aminotransferase; Provisional
Probab=97.39 E-value=0.041 Score=52.24 Aligned_cols=109 Identities=13% Similarity=0.142 Sum_probs=63.4
Q ss_pred cceeeeccCCCC-CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hh
Q psy10669 31 NGIELIASENFT-SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PA 108 (337)
Q Consensus 31 ~~i~l~asen~~-~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~A 108 (337)
.-|.|-..+|.. +|.+.+++...+. .. .++| ....+ ++.+++.+|. +|..++|+ +|
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~-~~-~~yp---------~~~~l----~~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKE-IS-GRYT---------YYEWL----EEEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHH-Hh-hcCC---------ChHHH----HHHHHHHHCC-------CEEECCCHHHH
Confidence 346666676777 7777788765422 21 1222 12334 3567777772 48888885 56
Q ss_pred HHHHHHhhCCc----------------------------------ccc--ccc-EEEEcCcc-cccccChHHHH---HHh
Q psy10669 109 NFAVCEKALPT----------------------------------NNA--RFD-FLSSGTTC-YSRCLDYARFR---QIC 147 (337)
Q Consensus 109 N~~v~~aLl~~----------------------------------~~a--~pk-lII~~~S~-~~~~~d~~~l~---eia 147 (337)
...+...+.+. +.+ +++ +|++++++ -+...+.+++. ++|
T Consensus 67 l~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a 146 (311)
T PRK08354 67 LYLIGILALRDRKVIIPRHTYGEYERVARFFAARIIKGPNDPEKLEELVERNSVVFFCNPNNPDGKFYNFKELKPLLDAV 146 (311)
T ss_pred HHHHHHhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecCCCHHHHHHhhcCCCEEEEecCCCCCCCccCHHHHHHHHHHh
Confidence 54444433321 101 244 44555543 24666666655 567
Q ss_pred hhcCCeEEEecccc
Q psy10669 148 DETDSIMFADMSHI 161 (337)
Q Consensus 148 ~~~ga~l~vD~AH~ 161 (337)
+++|+++++|+++.
T Consensus 147 ~~~~~~li~De~y~ 160 (311)
T PRK08354 147 EDRNALLILDEAFI 160 (311)
T ss_pred hhcCcEEEEeCcch
Confidence 88999999999983
No 313
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=97.37 E-value=0.036 Score=56.69 Aligned_cols=153 Identities=15% Similarity=0.084 Sum_probs=80.3
Q ss_pred ccEEEE-cCcc-cccccC---hHHHHHHhhhcCCeEEEecccc----ccc--cc---------ee-eeec-c-------C
Q psy10669 124 FDFLSS-GTTC-YSRCLD---YARFRQICDETDSIMFADMSHI----SGL--IA---------GV-KGVT-K-------T 174 (337)
Q Consensus 124 pklII~-~~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~----~Gl--i~---------g~-~~T~-~-------~ 174 (337)
+|+|++ .+++ .+...+ +++|.++|+++|+++++|+++. -|. .. .+ .++. | +
T Consensus 282 ~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~R 361 (517)
T PRK13355 282 TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYR 361 (517)
T ss_pred ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccc
Confidence 566654 4533 246666 5566678899999999999853 121 11 11 1222 2 2
Q ss_pred Cchhh--h--h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHH---HHHHHHHHHHHHHHHhC-CCE
Q psy10669 175 GEKIL--Y--D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQ---AQVKANASHLSDEMIKR-GYH 242 (337)
Q Consensus 175 Gg~i~--~--~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~---~~v~~na~~l~~~L~~~-G~~ 242 (337)
-|+++ . + +.+.++.... ...+++.+...+...++..- ..++++. .++.++-+++.+.|.+. |++
T Consensus 362 iG~~i~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~aL~~~--~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 437 (517)
T PRK13355 362 IGWMILSGNKRIAKDYIEGLNMLAN--MRLCSNVPAQSIVQTALGGH--QSVKDYLVPGGRVYEQRELVYNALNAIPGIS 437 (517)
T ss_pred eEEEEeeCchhhHHHHHHHHHHHhc--CcCCcChHHHHHHHHHhcCC--ccHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 25554 2 2 2333332111 11234445555555555321 1122222 34555667788888775 887
Q ss_pred EecCCCCCeEEEEEecCCC----cchHHHHHHHhhcCceeccC
Q psy10669 243 VVTGGTDVHLILIDLRKNK----LTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 243 v~~~~t~~h~v~V~~~~~~----~~~~~~~~~L~~~gI~v~~~ 281 (337)
+... .-+-.+++++.... -+...+.+.|++.||.+.+-
T Consensus 438 ~~~p-~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg 479 (517)
T PRK13355 438 AVKP-KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQG 479 (517)
T ss_pred cCCC-CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 7642 23445555664321 13345667788899998763
No 314
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=97.37 E-value=0.0018 Score=64.60 Aligned_cols=158 Identities=15% Similarity=0.148 Sum_probs=87.6
Q ss_pred cEEEEcCcccccc-------cChHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CC-ch---
Q psy10669 125 DFLSSGTTCYSRC-------LDYARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TG-EK--- 177 (337)
Q Consensus 125 klII~~~S~~~~~-------~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~G-g~--- 177 (337)
..||+. .++++. ..+++|+++|+++|++||+|+.|+ |+ .+ + +....| .+ |+
T Consensus 200 aavi~E-pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pig 277 (425)
T PRK09264 200 AAVIVE-TVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTLSKSISGYGLPMA 277 (425)
T ss_pred EEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEeccccCCCccceE
Confidence 356665 355432 246678899999999999999997 32 11 1 111123 12 32
Q ss_pred -hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE--EecCCCCC
Q psy10669 178 -ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH--VVTGGTDV 250 (337)
Q Consensus 178 -i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~--v~~~~t~~ 250 (337)
++. ++ ..+.......++ +.|+...++...++.++.+ -.++.+++.++.++|.++|++. .+. +.......
T Consensus 278 av~~~~~i-~~~~~~~~~~T~-~gnp~~~aaa~a~l~~~~~--~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~G 353 (425)
T PRK09264 278 LVLIKPEL-DVWKPGEHNGTF-RGNNLAFVTATAALEEYWS--DDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRG 353 (425)
T ss_pred EEEEchhh-hccCCCccCCCC-CCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecc
Confidence 222 33 222222222223 2445556655455534432 2367888888889998888762 222 11111245
Q ss_pred eEEEEEecCCCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669 251 HLILIDLRKNKLTGSKVELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 251 h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~----girig~~ 289 (337)
.+..|.+.+.. ....+.+.|.+.||.+.+.. .||+..+
T Consensus 354 l~~~i~l~~~~-~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~ 395 (425)
T PRK09264 354 MMQGIDFGDGE-LAGKIAAEAFENGLIIETSGPEDEVVKLLPP 395 (425)
T ss_pred cEEEEEecChH-HHHHHHHHHHHCCCEEeccCCCCCEEEEeCC
Confidence 56677775433 34566677777899986532 4666544
No 315
>KOG0257|consensus
Probab=97.36 E-value=0.008 Score=58.83 Aligned_cols=181 Identities=16% Similarity=0.090 Sum_probs=104.0
Q ss_pred HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------------------- 119 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------------------- 119 (337)
++..++++|....-= -+|..++| +++....+.+++.+
T Consensus 79 ~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~ 157 (420)
T KOG0257|consen 79 AKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSD 157 (420)
T ss_pred HHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcc
Confidence 356677777431100 14888888 67888778888764
Q ss_pred --------ccc---cccEEEEc-Ccc-----cccccChHHHHHHhhhcCCeEEEeccc------------cccccce---
Q psy10669 120 --------NNA---RFDFLSSG-TTC-----YSRCLDYARFRQICDETDSIMFADMSH------------ISGLIAG--- 167 (337)
Q Consensus 120 --------~~a---~pklII~~-~S~-----~~~~~d~~~l~eia~~~ga~l~vD~AH------------~~Gli~g--- 167 (337)
+.+ |+|+||+. +.+ |++.. +++|++||+++|.+++.|+.= ++.+ +|
T Consensus 158 ~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsRee-Le~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~e 235 (420)
T KOG0257|consen 158 WTLDPEELESKITEKTKAIILNTPHNPTGKVFSREE-LERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYE 235 (420)
T ss_pred ccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHH-HHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-Cchhh
Confidence 111 37877765 433 33332 556789999999999999762 1233 22
Q ss_pred ----ee-------eeccCCchhhh--hH----HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh---chh---h-HHHHH
Q psy10669 168 ----VK-------GVTKTGEKILY--DY----EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ---SDE---F-KSYQA 223 (337)
Q Consensus 168 ----~~-------~T~~~Gg~i~~--~l----~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~---~~~---~-~~y~~ 223 (337)
+. .||=+=|.+++ .+ ..-.++.+|+ ...+...|.++++..-+ +++ + .++.+
T Consensus 236 rtitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~-----~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~ 310 (420)
T KOG0257|consen 236 RTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFT-----CPTPIQEASAAAFALELACLQPGGSYFITELVK 310 (420)
T ss_pred eEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhccccc-----cCcHHHHHHHHHHhhhhhccCCcchhHHHHHHH
Confidence 11 12222244443 12 2222233342 23344444444443322 222 2 34778
Q ss_pred HHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 224 QVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 224 ~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
...+|-+.|++.|.+.|+++.. +....-+++|++... +.......++
T Consensus 311 ~y~~krdil~k~L~~lg~~v~~-p~gayyl~adfs~~~-~~~~~~~~~~ 357 (420)
T KOG0257|consen 311 EYKEKRDILAKALEELGLKVTG-PEGAYYLWADFSLAK-SWPFFEEILE 357 (420)
T ss_pred HHHHHHHHHHHHHHhcCCcccc-CCCceEEEEeccccc-cCCcchhhcc
Confidence 8899999999999999999985 355778889988322 3333344443
No 316
>PLN02231 alanine transaminase
Probab=97.35 E-value=0.099 Score=53.86 Aligned_cols=156 Identities=11% Similarity=0.133 Sum_probs=80.5
Q ss_pred ccE-EEEcCcc-cccccChHH---HHHHhhhcCCeEEEecccccccc-------c--------e-------ee---e---
Q psy10669 124 FDF-LSSGTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLI-------A--------G-------VK---G--- 170 (337)
Q Consensus 124 pkl-II~~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli-------~--------g-------~~---~--- 170 (337)
||+ +++++.+ -+...+.++ |.++|+++|++|+.|+++.-=.. . | +. |
T Consensus 272 ~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK 351 (534)
T PLN02231 272 VRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSK 351 (534)
T ss_pred eEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCc
Confidence 454 5555544 246666665 55778999999999998742111 0 0 11 1
Q ss_pred -----eccCCchhhh-----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhH-------HHHHHHHHHHHH
Q psy10669 171 -----VTKTGEKILY-----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFK-------SYQAQVKANASH 231 (337)
Q Consensus 171 -----T~~~Gg~i~~-----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~-------~y~~~v~~na~~ 231 (337)
+|-++|++.. ++.+.+....... .++ +....++...++..- .+..|+ ..++.+.++.+.
T Consensus 352 ~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~-~~s-~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~ 429 (534)
T PLN02231 352 GYYGECGKRGGYMEVTGFTSDVREQIYKVASVN-LCS-NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKT 429 (534)
T ss_pred ccccCCccceEEEEEecCCHHHHHHHHHHHhhh-cCC-ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 1224577642 4555554432222 222 233333333333100 001222 235678889999
Q ss_pred HHHHHHhC-CCEEecCCCCCeEEEEEecCC--Cc---------chHH-HHHHHhhcCceeccCc
Q psy10669 232 LSDEMIKR-GYHVVTGGTDVHLILIDLRKN--KL---------TGSK-VELVLEEIAIACNKNT 282 (337)
Q Consensus 232 l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~--~~---------~~~~-~~~~L~~~gI~v~~~~ 282 (337)
+.+.|.+. |+.+... .-+-.+++++.-. .+ .... ...+|++.||.+.+-.
T Consensus 430 l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs 492 (534)
T PLN02231 430 LEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGS 492 (534)
T ss_pred HHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCc
Confidence 99999885 8877541 2344445344311 11 1112 2445667899988754
No 317
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.31 E-value=0.0027 Score=64.15 Aligned_cols=158 Identities=11% Similarity=0.056 Sum_probs=88.6
Q ss_pred cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------eee-----ee-cc---CCchhh
Q psy10669 125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GVK-----GV-TK---TGEKIL 179 (337)
Q Consensus 125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~~-----~T-~~---~Gg~i~ 179 (337)
..||+. ...+ ...+ ++.++++|+++|++||+|+.|+ .|-.+ |+. .| +| .||+++
T Consensus 253 AAvI~E-Pv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~~~ 331 (464)
T TIGR00699 253 AAIIVE-PIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGYFF 331 (464)
T ss_pred EEEEEe-CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCccc
Confidence 456665 3543 3444 6679999999999999999994 23222 121 12 23 146544
Q ss_pred hhHHHHHhh--ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CE-Eec---CCCCCe
Q psy10669 180 YDYEEKINN--AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YH-VVT---GGTDVH 251 (337)
Q Consensus 180 ~~l~~~i~~--~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~-v~~---~~t~~h 251 (337)
.. +.+.+ ..+-+.+-+.|+...|+..++++.+.+ +...+++.+..++|.+.|.+.. +. ++. +.....
T Consensus 332 ~~--~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Gl 406 (464)
T TIGR00699 332 HD--PAFRPNKPYRQFNTWMGDPSRALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGT 406 (464)
T ss_pred cc--hhccCCCCcccccCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEE
Confidence 31 11221 111111224555566666556666543 2566777777788888887732 43 222 114566
Q ss_pred EEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
++.|.+.+.. ....+.+.|.+.|+.+.... -|||.-+
T Consensus 407 m~gie~~~~~-~~~~i~~~~~~~Gvl~~~~g~~~ir~~Pp 445 (464)
T TIGR00699 407 FIAWDTPDEA-KRDKLLKKARNNGVNIGGCGVKAIRLRPM 445 (464)
T ss_pred EEEEecCCHH-HHHHHHHHHHHCCcEEecCCCCeEEEeCC
Confidence 7777764322 23455566666799997642 4666533
No 318
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.26 E-value=0.017 Score=55.92 Aligned_cols=181 Identities=19% Similarity=0.162 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCccee--ecCCCchhHHHHHHhhCCc---------------------------------
Q psy10669 75 DEIEIVAQQRSLKAFNLDPEQWGCNV--QPYSGSPANFAVCEKALPT--------------------------------- 119 (337)
Q Consensus 75 ~~lE~~~~~~~a~lfg~~~~~~~~~v--~~~Sgt~AN~~v~~aLl~~--------------------------------- 119 (337)
|.|| +.-++.||+|+ +-| |+.|||+|...++.++++|
T Consensus 57 d~le----~iyA~vfgaE~----ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G 128 (403)
T PF06838_consen 57 DKLE----RIYADVFGAED----ALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG 128 (403)
T ss_dssp HHHH----HHHHHHCT-SE----EEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred HHHH----HHHHHHhCchh----hhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence 5677 35689999998 445 4589999998889999876
Q ss_pred -------------------ccc---cccEEEEcCcc-cc--cccChHHHHHHhhh---c--CCeEEEeccccc-------
Q psy10669 120 -------------------NNA---RFDFLSSGTTC-YS--RCLDYARFRQICDE---T--DSIMFADMSHIS------- 162 (337)
Q Consensus 120 -------------------~~a---~pklII~~~S~-~~--~~~d~~~l~eia~~---~--ga~l~vD~AH~~------- 162 (337)
+.+ ++|+|.+--|- |+ ....+++|+++++. . +++++||-+=+=
T Consensus 129 i~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP 208 (403)
T PF06838_consen 129 IKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP 208 (403)
T ss_dssp -EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G
T ss_pred ceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc
Confidence 101 26888886433 54 45667777776643 3 889999988210
Q ss_pred cccc--eeeeec---------cCCchhhh--hHHHHHh-hccCCCCC--CCCcHHHHHHHHHHHHHHhchhhHHHHHHHH
Q psy10669 163 GLIA--GVKGVT---------KTGEKILY--DYEEKIN-NAVFPSLQ--GGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226 (337)
Q Consensus 163 Gli~--g~~~T~---------~~Gg~i~~--~l~~~i~-~~~~p~~~--g~~~~~~iaala~a~~e~~~~~~~~y~~~v~ 226 (337)
.-++ -+.+.. |.||+|++ +|.++.- +-.-|++. .++.....=.+.-++-. . +....+-+
T Consensus 209 ~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFl--A---P~vV~eAl 283 (403)
T PF06838_consen 209 TEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFL--A---PHVVGEAL 283 (403)
T ss_dssp GGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHH--H---HHHHHHHH
T ss_pred cccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchHHHHHhHHhh--c---hHHHHHHH
Confidence 1111 122221 56899987 6766544 33457772 12211111111122111 1 23345556
Q ss_pred HHHHHHHHHHHhCCCEEecCCCCCe---EEEEEecCCCcchHHHHHHHh
Q psy10669 227 ANASHLSDEMIKRGYHVVTGGTDVH---LILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 227 ~na~~l~~~L~~~G~~v~~~~t~~h---~v~V~~~~~~~~~~~~~~~L~ 272 (337)
+-+-..+.-+.+.||+|.....+.+ +..|.+++ ...+-..|+
T Consensus 284 Kgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~----~e~l~~FC~ 328 (403)
T PF06838_consen 284 KGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGS----PEKLIAFCQ 328 (403)
T ss_dssp HHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SS----HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCC----HHHHHHHHH
Confidence 6677777788889999987433322 55566653 445555555
No 319
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=97.21 E-value=0.0035 Score=63.24 Aligned_cols=144 Identities=10% Similarity=0.148 Sum_probs=77.5
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc--e-------------eeeecc-------CCchhhh-hHHHHHhhccCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA--G-------------VKGVTK-------TGEKILY-DYEEKINNAVFPSLQG 196 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~--g-------------~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g 196 (337)
+++++++|+++|++||+|+.|+ |+ + | +...+| -|+++.. ++.+......+ +++
T Consensus 245 l~~l~~lc~~~g~llI~DEv~t-G~-GrtG~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~~~~~~~~-~T~- 320 (457)
T PRK05639 245 FKELKKLLDEHGILLVMDEVQT-GI-GRTGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDLTSGSAL-LTP- 320 (457)
T ss_pred HHHHHHHHHHcCCEEEEechhh-cc-CcCchHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHhhcCCCcc-cCC-
Confidence 4468899999999999999997 63 2 1 011122 1222222 44442211111 223
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEEEEEecCC-Cc----chHHHH
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLILIDLRKN-KL----TGSKVE 268 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~-~~----~~~~~~ 268 (337)
+.|+...|+..+++..+.+ +...+++.+..++|.+.|++ .++.++.. -...-++-+.+... .. ....+.
T Consensus 321 ~g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~ 397 (457)
T PRK05639 321 AANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKIC 397 (457)
T ss_pred CcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHH
Confidence 3455555555555555533 35678888899999999987 34444320 01122333333221 10 123455
Q ss_pred HHHhhcCceeccC----cccchhhhh
Q psy10669 269 LVLEEIAIACNKN----TGISLAAEI 290 (337)
Q Consensus 269 ~~L~~~gI~v~~~----~girig~~~ 290 (337)
+.|.+.|+.+... .-|||.-+.
T Consensus 398 ~~~~~~Gv~~~~~g~~~~~lr~~Ppl 423 (457)
T PRK05639 398 WRAFELGLILPSYGMFGNVIRITPPL 423 (457)
T ss_pred HHHHhCCeEEeecCCCCCEEEEeCCC
Confidence 5566679999753 256665443
No 320
>PLN02672 methionine S-methyltransferase
Probab=97.17 E-value=0.067 Score=59.09 Aligned_cols=236 Identities=13% Similarity=0.080 Sum_probs=131.9
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
...|.|...||.. ||.|++++...+. ++.. +.|.... -+.+ ++.+++.+|.+.... -+|..++|+.
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~-~~~~-------s~g~pdl--r~aL-a~~la~~~Gv~~d~~-e~IIvt~Gs~ 764 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFV-RQNI-------SESETDP--RPSI-LQFIKSNYGFPTDSC-TEFVYGDTSL 764 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHh-hcCC-------CCCChHH--HHHH-HHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence 3568898888887 8999999876543 2211 1122111 1222 246677778764210 1488888864
Q ss_pred -hHHHHHHhhCCc--------------------------------------------cccc----ccEEEEcCccc--cc
Q psy10669 108 -ANFAVCEKALPT--------------------------------------------NNAR----FDFLSSGTTCY--SR 136 (337)
Q Consensus 108 -AN~~v~~aLl~~--------------------------------------------~~a~----pklII~~~S~~--~~ 136 (337)
+...++.+++++ +..+ +.++++++..+ +.
T Consensus 765 elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~ 844 (1082)
T PLN02672 765 ALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGL 844 (1082)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCc
Confidence 555667888654 0011 24667766423 46
Q ss_pred ccChHHHH---HHhhhcCCeEEEecccc----cc-------ccc------------e--eeeec-c-------CCchhhh
Q psy10669 137 CLDYARFR---QICDETDSIMFADMSHI----SG-------LIA------------G--VKGVT-K-------TGEKILY 180 (337)
Q Consensus 137 ~~d~~~l~---eia~~~ga~l~vD~AH~----~G-------li~------------g--~~~T~-~-------~Gg~i~~ 180 (337)
..+-+++. ++|+++|+++++|+++. .| +.. . +.+|. | +-|++++
T Consensus 845 v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIa 924 (1082)
T PLN02672 845 LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLAL 924 (1082)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEe
Confidence 66666554 67899999999999985 22 110 0 11222 1 2355554
Q ss_pred ---hHHHHHhhccCCCCCCCCcH-HHHHHHH-HHHHHHh----chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 181 ---DYEEKINNAVFPSLQGGPHN-HAIGAIA-TAMLQAQ----SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 181 ---~l~~~i~~~~~p~~~g~~~~-~~iaala-~a~~e~~----~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
++.+.+... +... +++. ...++.+ .++.+-. ....+++++.+.++.+++.+.|.+.|+++..+ .-+-
T Consensus 925 p~~eLi~~l~~~--~~~s-~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~P-eGGF 1000 (1082)
T PLN02672 925 NDSVLIDAFHSA--PGLS-RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEP-QGGI 1000 (1082)
T ss_pred CCHHHHHHHHHh--hhhc-CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecC-CcEE
Confidence 266666542 1222 2222 2222211 1111100 12335667778999999999999999987642 2345
Q ss_pred EEEEEecC----------------CCcchHHHHHHHh-hcCceeccC
Q psy10669 252 LILIDLRK----------------NKLTGSKVELVLE-EIAIACNKN 281 (337)
Q Consensus 252 ~v~V~~~~----------------~~~~~~~~~~~L~-~~gI~v~~~ 281 (337)
.++++++. .+.+..++.+.|. +.||.+++-
T Consensus 1001 fLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PG 1047 (1082)
T PLN02672 1001 SMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSS 1047 (1082)
T ss_pred EEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecC
Confidence 55665431 0235566666665 579999873
No 321
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=97.17 E-value=0.04 Score=55.68 Aligned_cols=161 Identities=7% Similarity=0.038 Sum_probs=87.6
Q ss_pred ccEEEEc-Ccc-cccccChHHHH---HHhhhcCCeEEEeccccc----c--c---c-------------c---eeeeec-
Q psy10669 124 FDFLSSG-TTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G--L---I-------------A---GVKGVT- 172 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G--l---i-------------~---g~~~T~- 172 (337)
+|+|++. +++ .+...+.+++. ++|+++|+++++|++..- + . + . .+..|.
T Consensus 192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S 271 (468)
T PLN02450 192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS 271 (468)
T ss_pred eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence 5655554 544 24667666555 667899999999998652 1 1 0 0 012222
Q ss_pred c-------CCchhhh--h-HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669 173 K-------TGEKILY--D-YEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKRG 240 (337)
Q Consensus 173 ~-------~Gg~i~~--~-l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~G 240 (337)
| +-|++++ + +.+.+... .+. +..+.+...+++..+..- .....++.++++.+.-+.+.+.|.+.|
T Consensus 272 K~~~l~GlRiG~li~~~~~l~~~~~~~-~~~--~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g 348 (468)
T PLN02450 272 KDLGLPGFRVGAIYSNDEMVVSAATKM-SSF--GLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG 348 (468)
T ss_pred ccCCCCCccEEEEEECCHHHHHHHHHH-hhc--CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 2356654 2 34444332 121 223344444444444221 001235567888888888999999999
Q ss_pred CEEecCCCCCeEEEEEecCCC----cc--hHHHHHHHhhcCceeccCc--------ccchhh
Q psy10669 241 YHVVTGGTDVHLILIDLRKNK----LT--GSKVELVLEEIAIACNKNT--------GISLAA 288 (337)
Q Consensus 241 ~~v~~~~t~~h~v~V~~~~~~----~~--~~~~~~~L~~~gI~v~~~~--------girig~ 288 (337)
+.+... ..+--++++++..- +. ...+.+.|++.||.+.+-. .+||+.
T Consensus 349 i~~~~~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f 409 (468)
T PLN02450 349 IKCLKS-NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCF 409 (468)
T ss_pred CcccCC-CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEe
Confidence 876542 23445678875321 11 1123344567899997643 577753
No 322
>PRK07678 aminotransferase; Validated
Probab=97.11 E-value=0.0056 Score=61.61 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=78.3
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc-----cC-
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA-----VF- 191 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~-----~~- 191 (337)
+++++++|+++|++||+|+-|+ .|-.+ | ++..+| .||+ +.. ++.+.+... .+
T Consensus 236 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h 315 (451)
T PRK07678 236 MKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRH 315 (451)
T ss_pred HHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCccccccc
Confidence 5678899999999999999984 56555 1 122223 2453 222 455555421 11
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCC-------
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNK------- 261 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~------- 261 (337)
.+++ +.|+...|+..+++..+.+ + ...+++.+..++|.+.|.+. .+.++. --....++.|.+....
T Consensus 316 ~~T~-~gnp~~~aaa~a~l~~l~~-~--~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~ 391 (451)
T PRK07678 316 VNTF-GGNPAACALALKNLEIMEN-E--NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPAD 391 (451)
T ss_pred CCCC-CcCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCc
Confidence 1223 4566666666666666643 2 56788999999999888652 222221 0023344555553211
Q ss_pred -cchHHHHHHHhhcCceecc
Q psy10669 262 -LTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 262 -~~~~~~~~~L~~~gI~v~~ 280 (337)
-....+...|.+.||.+.+
T Consensus 392 ~~~a~~i~~~l~~~Gv~~~~ 411 (451)
T PRK07678 392 NDKVASVVAACKEKGLIIGK 411 (451)
T ss_pred hHHHHHHHHHHHHCCcEEee
Confidence 0134455666778999864
No 323
>PRK07481 hypothetical protein; Provisional
Probab=97.10 E-value=0.012 Score=59.12 Aligned_cols=146 Identities=16% Similarity=0.206 Sum_probs=79.3
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc------c-
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA------V- 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~------~- 190 (337)
++.++++|+++|++||+|+-++ .|=.+ + +...+| .||+ +.. ++.+.+... +
T Consensus 236 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 315 (449)
T PRK07481 236 WPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIM 315 (449)
T ss_pred HHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccc
Confidence 6679999999999999999986 33333 1 111222 2453 223 455555432 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-----c
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-----L 262 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-----~ 262 (337)
..+++ +.|+...|+....+..+.+ +...+++.+..++|.+.|++. .+.++.. -...-++-|.+.... .
T Consensus 316 h~~T~-~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~ 391 (449)
T PRK07481 316 HGYTY-SGHPVACAAALATLDIVVR---EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPI 391 (449)
T ss_pred cCCCC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCC
Confidence 11223 2355556665555655533 356777888888888888762 2333220 012234445553211 0
Q ss_pred -----chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 263 -----TGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 263 -----~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
....+...|.+.|+.+.+.. .+||..+
T Consensus 392 ~~~~~~~~~~~~~~~~~Gvl~~~~g~~i~l~Pp 424 (449)
T PRK07481 392 DPSKGYANAVADVARENGVLVRPSGTKIILSPP 424 (449)
T ss_pred CchhHHHHHHHHHHHhCCeEEEecCCEEEEECC
Confidence 12345555667799987532 4666544
No 324
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.06 E-value=0.0079 Score=60.15 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=83.2
Q ss_pred ccChHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc---CCchhhh-hHHHHHh-----hccCCCC
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK---TGEKILY-DYEEKIN-----NAVFPSL 194 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~---~Gg~i~~-~l~~~i~-----~~~~p~~ 194 (337)
+.-+++|+++|+++|++|++|+.|+ .|..+ ++ ...+| -||++.. ++.+..+ ......+
T Consensus 238 ~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~~~~g~~~~~~i~~~~~~~~~~~~~~~~T 317 (431)
T TIGR03251 238 PEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQVCGIMAGRRVDEVADNVFAVPSRLNST 317 (431)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccCccceEEecchHHHhhhhcccCccccCCC
Confidence 3456679999999999999999998 44443 10 11112 3455544 2222111 1111122
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-EecC-CCCCeEEEEEecCCCcchHHHHHH
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVTG-GTDVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~~-~t~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
+ +.++...++..+++..+.+ + ...+++.+..++|.+.|.+. .+. ++.. -...-++.|.+.... ....+.+.
T Consensus 318 ~-~gnpl~~aaa~a~L~~l~~-~--~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~ 392 (431)
T TIGR03251 318 W-GGNLVDMVRATRILEIIEE-E--RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQ 392 (431)
T ss_pred C-CCCHHHHHHHHHHHHHHHh-c--CHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHH
Confidence 3 2456666666666665533 2 35678888888888888762 222 2221 122345566664332 34456677
Q ss_pred HhhcCceeccCc--ccchhhh
Q psy10669 271 LEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 271 L~~~gI~v~~~~--girig~~ 289 (337)
|.+.||.+.+.. .+||.-+
T Consensus 393 l~~~Gvl~~~~g~~~lr~~P~ 413 (431)
T TIGR03251 393 LYREGVLLLGCGERSIRFRPP 413 (431)
T ss_pred HHhCCeEEecCCCCeEEEECC
Confidence 778899996532 5666433
No 325
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=97.04 E-value=0.0047 Score=61.38 Aligned_cols=145 Identities=13% Similarity=0.175 Sum_probs=79.1
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CC-ch-----hhh-hHHHHHhhccCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TG-EK-----ILY-DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~G-g~-----i~~-~l~~~i~~~~~p~~~g~ 197 (337)
+++|+++|+++|++||+|+.|+ .|=.+ + +....| .| |+ +.. ++ +.+........+ +
T Consensus 217 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~-~ 294 (412)
T TIGR02407 217 LQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTF-R 294 (412)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCccceeEEEEchhh-hccCCCccCCCC-C
Confidence 4568899999999999999987 22211 1 122223 12 32 222 33 222222222223 3
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CC-CEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RG-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
.++...++..+++..+++. .++.+++.+..++|.++|++ .+ + +.......-++.+.+.+.. ....+.+.|.
T Consensus 295 gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~l~l~~~~-~~~~~~~~~~ 370 (412)
T TIGR02407 295 GNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERLDRIVAEYPEL-IKQVRGRGLMQGIECGDGD-LAGKIAKAAF 370 (412)
T ss_pred ccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHhhCCCc-eEeeecceeEEEEEecChH-HHHHHHHHHH
Confidence 4555555544555533331 35678888888888888775 22 2 1111123446667775432 3456667777
Q ss_pred hcCceeccCc----ccchhhhh
Q psy10669 273 EIAIACNKNT----GISLAAEI 290 (337)
Q Consensus 273 ~~gI~v~~~~----girig~~~ 290 (337)
+.||.+.... .|||..+.
T Consensus 371 ~~Gv~v~~~~~~~~~lr~~p~l 392 (412)
T TIGR02407 371 ENGLIIETSGPNDEVIKLLPPL 392 (412)
T ss_pred HCCCEEeccCCCCCEEEEECCC
Confidence 7899996422 56776543
No 326
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=97.04 E-value=0.0088 Score=60.08 Aligned_cols=146 Identities=12% Similarity=0.133 Sum_probs=81.4
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeeccC--C----chhhh--hHHHHHhhccCCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTKT--G----EKILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~~--G----g~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
+++++++|+++|++||+|+.|. .|-.+ + +....|. + |.+++ ++.+.+........+ +.
T Consensus 227 l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~-~~ 305 (443)
T PRK08360 227 FKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTL-SG 305 (443)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhcCCCCCCCC-Cc
Confidence 6678899999999999999997 33222 1 1111221 2 33333 465555433222223 34
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-------cchHHHH
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-------LTGSKVE 268 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-------~~~~~~~ 268 (337)
++...++...++..+.+ .+..+++.++.++|.+.|++. .+.++.. -...-++-|.+.+.. -....+.
T Consensus 306 ~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~ 382 (443)
T PRK08360 306 NPVASAAALAVIEEIEE---KNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVV 382 (443)
T ss_pred CHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHH
Confidence 45555555566665543 246789999999999988763 3333321 012234444443211 0134566
Q ss_pred HHHhhcCceeccCc--ccchhhh
Q psy10669 269 LVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 269 ~~L~~~gI~v~~~~--girig~~ 289 (337)
..|.+.||.+.... .+||.-+
T Consensus 383 ~~l~~~Gi~~~~~~~~~lr~~P~ 405 (443)
T PRK08360 383 WRAWELGLIVTFFSGNVLRIQPP 405 (443)
T ss_pred HHHHHCCeEEeecCCCEEEEeCC
Confidence 66777899987543 5666433
No 327
>PRK05839 hypothetical protein; Provisional
Probab=96.98 E-value=0.23 Score=48.43 Aligned_cols=144 Identities=14% Similarity=0.096 Sum_probs=75.3
Q ss_pred ccEEEEcCccc--ccccChHHHH---HHhhhcCCeEEEeccccc--------ccc-----------c--eeeeec-c---
Q psy10669 124 FDFLSSGTTCY--SRCLDYARFR---QICDETDSIMFADMSHIS--------GLI-----------A--GVKGVT-K--- 173 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~~~l~---eia~~~ga~l~vD~AH~~--------Gli-----------~--g~~~T~-~--- 173 (337)
+|+|++..-.+ +...+.+++. ++|+++|+++++|++..- .+. . .+.+|. |
T Consensus 156 ~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~ 235 (374)
T PRK05839 156 VDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSS 235 (374)
T ss_pred ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccC
Confidence 67777652233 4666666655 567889999999998541 000 0 112222 2
Q ss_pred ----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669 174 ----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG 247 (337)
Q Consensus 174 ----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~ 247 (337)
+-|+++. ++.+.+.........+.+.+.. .++..++.. +...++.++++.++-+.+.+.| |+. ..
T Consensus 236 ~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l---~~~-~p-- 306 (374)
T PRK05839 236 APGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQ-KAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL---GIT-IP-- 306 (374)
T ss_pred CccceeEEEecCHHHHHHHHHHHhhcCCCCChHHH-HHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc---CCC-CC--
Confidence 2366654 4666555432111122333322 333333321 2233566777777777666654 443 21
Q ss_pred CCCeEEEEEecCCCcchHHHHHHH-hhcCceecc
Q psy10669 248 TDVHLILIDLRKNKLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 248 t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~ 280 (337)
..+--+++++.+ ..++.+.| ++.||.+.+
T Consensus 307 ~gg~fi~~~~~~----~~~~~~~l~~~~gi~v~p 336 (374)
T PRK05839 307 PATFYVWLPVDN----DEEFTKKLYQNEGIKVLP 336 (374)
T ss_pred CeeEEEEEeCCC----hHHHHHHHHHHCCEEEeC
Confidence 345556777642 34555566 458999886
No 328
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=96.97 E-value=0.0064 Score=60.99 Aligned_cols=145 Identities=14% Similarity=0.130 Sum_probs=80.7
Q ss_pred hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCc-----hhhh-hHHHHHhhccCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGE-----KILY-DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg-----~i~~-~l~~~i~~~~~p~~~g~ 197 (337)
+++|+++|+++|++||+|+-|+ |+ .+ + ++..+| .|| ++.. ++.+.+.......++ +
T Consensus 242 l~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~-~ 319 (443)
T PRK06058 242 LPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTY-G 319 (443)
T ss_pred HHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCC-C
Confidence 6678999999999999999987 43 22 1 111122 133 3333 455555433222333 4
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC--Cc-c---hHHHH
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN--KL-T---GSKVE 268 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~--~~-~---~~~~~ 268 (337)
.|+...|+...++..+.+ .+..+++.+..++|.++|++. .+.++.. -...-+..+.+.+. .. + ...+.
T Consensus 320 gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~ 396 (443)
T PRK06058 320 GNPVACAAALAAIETIEE---DDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALA 396 (443)
T ss_pred CCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHH
Confidence 666777777777766543 256777888888888888772 2333210 12333444555321 10 1 22344
Q ss_pred HHHhhcCceeccCc----ccchhhh
Q psy10669 269 LVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 269 ~~L~~~gI~v~~~~----girig~~ 289 (337)
+.|.+.||.+.+.. -||+.-+
T Consensus 397 ~~~~~~Gv~~~~~~~~~~~lr~~Pp 421 (443)
T PRK06058 397 AAAHAAGVIVLTCGTYGNVIRLLPP 421 (443)
T ss_pred HHHHHCCeEEeccCCCCCEEEEECC
Confidence 44456799987522 4666433
No 329
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=96.97 E-value=0.014 Score=58.39 Aligned_cols=143 Identities=17% Similarity=0.135 Sum_probs=79.8
Q ss_pred ccccChHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeec--------cCCchhhh-hHHHHHh----
Q psy10669 135 SRCLDYARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVT--------KTGEKILY-DYEEKIN---- 187 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~--------~~Gg~i~~-~l~~~i~---- 187 (337)
+-++=++++++||++||++||+|+= ..|. .| | +..+. |-|+.+++ ++.+.+.
T Consensus 233 pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~ 311 (449)
T COG0161 233 PPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDA 311 (449)
T ss_pred CChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccC
Confidence 3445577899999999999999985 2221 11 1 11111 33444444 3444333
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEEEEEecCCC--c
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLILIDLRKNK--L 262 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~~--~ 262 (337)
.+.+.+.+=+.||-+-| .+.+-+++.+. +...+++.+...+|.++|.+ .+...+++ -.-.-+.-|.+.... .
T Consensus 312 ~~f~HG~TYsghPlacA-aAla~L~i~e~--e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~ 388 (449)
T COG0161 312 GAFMHGHTYSGNPLACA-AALANLDILEE--EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATK 388 (449)
T ss_pred CeeccCCccccCHHHHH-HHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccc
Confidence 23444443344444433 33444444432 36788889999999999997 33334431 122234444443322 1
Q ss_pred ------chHHHHHHHhhcCceeccC
Q psy10669 263 ------TGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 263 ------~~~~~~~~L~~~gI~v~~~ 281 (337)
.+..+.+.+.+.|+.+++.
T Consensus 389 ~~f~~~~~~~~~~~~~e~Gl~iRp~ 413 (449)
T COG0161 389 TPFEARVGARVRAAALERGLLIRPL 413 (449)
T ss_pred cchhhhHHHHHHHHHHHCCeEEeec
Confidence 1556777777789999975
No 330
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=96.96 E-value=0.12 Score=54.03 Aligned_cols=59 Identities=10% Similarity=0.049 Sum_probs=39.1
Q ss_pred HHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCC-------CEE--ecCCCCCeEEEEEecCCCc
Q psy10669 203 IGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKRG-------YHV--VTGGTDVHLILIDLRKNKL 262 (337)
Q Consensus 203 iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~G-------~~v--~~~~t~~h~v~V~~~~~~~ 262 (337)
.+++-.+++.+ -...|.++.++.++++++|++.|.+.+ |++ +. ..+..++...+...+.
T Consensus 437 AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~-~pdlniV~Fr~~~~g~ 506 (608)
T TIGR03811 437 AASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLT-KPDFNMVDYVFNEKGN 506 (608)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecC-CCCcceEEEEEecCCC
Confidence 44444555554 345788999999999999999998854 344 32 2455555555555553
No 331
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=96.95 E-value=0.065 Score=53.92 Aligned_cols=153 Identities=6% Similarity=0.018 Sum_probs=80.5
Q ss_pred ccEEEE-cCcc-cccccChHH---HHHHhhhcCCeEEEeccccccccce-----------------------eeeec-c-
Q psy10669 124 FDFLSS-GTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIAG-----------------------VKGVT-K- 173 (337)
Q Consensus 124 pklII~-~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~g-----------------------~~~T~-~- 173 (337)
+|+|++ .+++ .+...+-+. |.++|+++|+.+++|++...-+... +..+. |
T Consensus 201 vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~ 280 (447)
T PLN02607 201 VRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKD 280 (447)
T ss_pred eeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhc
Confidence 454444 4544 346666554 5577899999999999975422210 01111 2
Q ss_pred ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH--HhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669 174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ--AQSDEFKSYQAQVKANASHLSDEMIKRGYH 242 (337)
Q Consensus 174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e--~~~~~~~~y~~~v~~na~~l~~~L~~~G~~ 242 (337)
+-|+++. ++...+..... ++.+.......++..+.. ......++.++++.++.+.+.+.|++.|+.
T Consensus 281 fg~~GlRvG~ivs~n~~l~~~~~~~~~---~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~ 357 (447)
T PLN02607 281 LGLPGFRVGTIYSYNDKVVTTARRMSS---FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIE 357 (447)
T ss_pred CCCCcceEEEEEEcCHHHHHHHHHHhh---cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 1155543 34444443211 111222222222222221 111112355677788888899999999987
Q ss_pred EecCCCCCeEEEEEecCCC----cc-hHHHH-HHHhhcCceecc
Q psy10669 243 VVTGGTDVHLILIDLRKNK----LT-GSKVE-LVLEEIAIACNK 280 (337)
Q Consensus 243 v~~~~t~~h~v~V~~~~~~----~~-~~~~~-~~L~~~gI~v~~ 280 (337)
... ....-.++++++..- .+ ..++. +.++++||.+.+
T Consensus 358 ~~~-~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~p 400 (447)
T PLN02607 358 CLK-GNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISP 400 (447)
T ss_pred ccc-CCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcC
Confidence 654 233557788886421 01 12333 455668999876
No 332
>PRK08297 L-lysine aminotransferase; Provisional
Probab=96.88 E-value=0.019 Score=57.71 Aligned_cols=156 Identities=13% Similarity=0.122 Sum_probs=89.7
Q ss_pred ccEEEEcCccccc-------ccChHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc---CCchhhh
Q psy10669 124 FDFLSSGTTCYSR-------CLDYARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK---TGEKILY 180 (337)
Q Consensus 124 pklII~~~S~~~~-------~~d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~---~Gg~i~~ 180 (337)
+..||+.+ ..+. +..+++++++|+++|++||+|+-|+ .|-.+ + +...+| -||.+.+
T Consensus 226 iAavI~EP-i~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~~a~l~~ 304 (443)
T PRK08297 226 IACFIAEP-IQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQVCGIMAG 304 (443)
T ss_pred EEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEecccccccceecc
Confidence 46677753 3332 3556679999999999999999996 44443 1 111122 3566554
Q ss_pred -hHHHHHhhcc--CCCCCCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CC-----EEecCCC
Q psy10669 181 -DYEEKINNAV--FPSLQGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GY-----HVVTGGT 248 (337)
Q Consensus 181 -~l~~~i~~~~--~p~~~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~-----~v~~~~t 248 (337)
++.+...... .....+| .|+...++...++..+.+ ++..+++.+..++|.+.|++. .+ +|-+
T Consensus 305 ~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg--- 378 (443)
T PRK08297 305 RRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE---DGLVENAARQGEYLLARLEELAAEFPAVVSNVRG--- 378 (443)
T ss_pred hHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec---
Confidence 3322111110 0112223 355555555555555532 356788888999998888762 12 2322
Q ss_pred CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchh
Q psy10669 249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLA 287 (337)
Q Consensus 249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig 287 (337)
...++.+.+.+.. ....+...|.+.||.+.+.. .+||.
T Consensus 379 ~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~~~~~~lr~~ 418 (443)
T PRK08297 379 RGLMCAFDLPTTA-DRDEVIRRLWEEGVLVLPCGERSIRFR 418 (443)
T ss_pred cceEEEEEecCHH-HHHHHHHHHHHCCEEEecCCCCeEEEE
Confidence 3567777775433 34456667778899986532 46664
No 333
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.83 E-value=0.028 Score=56.79 Aligned_cols=143 Identities=15% Similarity=0.157 Sum_probs=76.7
Q ss_pred hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCchh------hh-hHHHHHhh------cc
Q psy10669 140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGEKI------LY-DYEEKINN------AV 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~------~~ 190 (337)
++.++++|+++|++||+|+-|+ |+ .+ | +...+| .||++ .. ++.+.+.. ..
T Consensus 247 l~~lr~lc~~~g~llI~DEV~T-G~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~ 325 (460)
T PRK06916 247 LKGLRNLCTKYNVLFITDEVAT-GFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTF 325 (460)
T ss_pred HHHHHHHHHHcCCEEEeechhh-CCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCcc
Confidence 3468899999999999999984 43 22 1 111223 24542 22 45444331 11
Q ss_pred C-CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc-----
Q psy10669 191 F-PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL----- 262 (337)
Q Consensus 191 ~-p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~----- 262 (337)
+ ..+++ .|+...|+..+.+..+.+ +.+.+++.++.++|.+.|++. .+.++.. -...-++-|.+.....
T Consensus 326 ~~~~T~~-gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~ 401 (460)
T PRK06916 326 FHGHSYT-GNPLGCAVALANLELYEK---TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPF 401 (460)
T ss_pred ccCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCC
Confidence 2 22343 366666665555655533 357788999999999998873 1221210 0011233333322110
Q ss_pred --c---hHHHHHHHhhcCceeccC-cccchh
Q psy10669 263 --T---GSKVELVLEEIAIACNKN-TGISLA 287 (337)
Q Consensus 263 --~---~~~~~~~L~~~gI~v~~~-~girig 287 (337)
+ +..+...|.+.||.+.+. ..+|+-
T Consensus 402 ~~~~~~~~~i~~~~~~~Gvl~~~~g~~l~~~ 432 (460)
T PRK06916 402 EWTERVGVQVCKRSRELGMLTRPLGNTIVFM 432 (460)
T ss_pred CchhhHHHHHHHHHHHCCeEEEecCCEEEEe
Confidence 0 234556666789998763 256654
No 334
>PRK07036 hypothetical protein; Provisional
Probab=96.80 E-value=0.023 Score=57.46 Aligned_cols=158 Identities=15% Similarity=0.155 Sum_probs=85.5
Q ss_pred cEEEEcCccc---ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc---------e----eeeecc--CCch----
Q psy10669 125 DFLSSGTTCY---SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA---------G----VKGVTK--TGEK---- 177 (337)
Q Consensus 125 klII~~~S~~---~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g----~~~T~~--~Gg~---- 177 (337)
..||+.+ .. ++..+ ++.++++|+++|++||+|+-|+ .|=.+ | ++..+| .||+
T Consensus 222 Aavi~EP-v~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~ 300 (466)
T PRK07036 222 AAFIAEP-ILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLG 300 (466)
T ss_pred EEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccE
Confidence 4666653 33 33334 6789999999999999999984 44333 1 111122 2454
Q ss_pred --hhh-hHHHHHhhc------cCCC-CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC
Q psy10669 178 --ILY-DYEEKINNA------VFPS-LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG 246 (337)
Q Consensus 178 --i~~-~l~~~i~~~------~~p~-~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~ 246 (337)
+.. ++.+.+... .+.+ ++ +.|+...|+....+..+.+ .+..+++.+..++|.+.|++. .+.++..
T Consensus 301 av~~~~~i~~~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~ 376 (466)
T PRK07036 301 AVIISERLLDVISGPNAKGNVFTHGFTY-SGHPVACAAALKNIEIMER---EGLCEHVREVGPYFEERLASLRELPLVGD 376 (466)
T ss_pred EEEEcHHHHHHHhcccCcCcccccCCCC-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhccCCCEEE
Confidence 222 455544321 1112 33 3466666666666666543 257888888999999888762 2222210
Q ss_pred -CCCCeEEEEEecCCC-------c---chHHHHHHHhhcCceeccCc-ccchh
Q psy10669 247 -GTDVHLILIDLRKNK-------L---TGSKVELVLEEIAIACNKNT-GISLA 287 (337)
Q Consensus 247 -~t~~h~v~V~~~~~~-------~---~~~~~~~~L~~~gI~v~~~~-girig 287 (337)
-...-++-|.+.... . .+..+...|.+.||.+.+.. -+||.
T Consensus 377 vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~l~ 429 (466)
T PRK07036 377 VRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLS 429 (466)
T ss_pred EEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecCCEEEEe
Confidence 011223444443211 0 12345556667799987532 34554
No 335
>PRK06917 hypothetical protein; Provisional
Probab=96.78 E-value=0.015 Score=58.54 Aligned_cols=138 Identities=14% Similarity=0.180 Sum_probs=76.3
Q ss_pred hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCchh------hh-hHHHHHhhc---cCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGEKI------LY-DYEEKINNA---VFPS 193 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~~---~~p~ 193 (337)
++.|+++|+++|++||+|+.|+ |+ .+ + ++..+| .||++ .. ++.+.+.+. ++.+
T Consensus 223 l~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~ 301 (447)
T PRK06917 223 YKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSG 301 (447)
T ss_pred HHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccc
Confidence 4568899999999999999996 53 11 1 111122 24542 22 455544431 2222
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-----c---
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-----L--- 262 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-----~--- 262 (337)
.+-+.|+...|+....+..+.+ ++..+++.++.++|.+.|++. .+.++.. -...-+.-|.+.... .
T Consensus 302 ~T~~gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~ 378 (447)
T PRK06917 302 HTLSANPLSAATALAVLEYMEK---HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKS 378 (447)
T ss_pred cCCCCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcch
Confidence 1223566666666666666543 256788999999999988873 2332220 012223444442210 0
Q ss_pred --chHHHHHHHhhcCceeccC
Q psy10669 263 --TGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 263 --~~~~~~~~L~~~gI~v~~~ 281 (337)
....+...|.+.||.+.+.
T Consensus 379 ~~~~~~~~~~~~~~Gvl~~~~ 399 (447)
T PRK06917 379 QAVASELISVAAKNGLLLYPA 399 (447)
T ss_pred hHHHHHHHHHHHhCCcEEEec
Confidence 1334555566789998653
No 336
>PRK07482 hypothetical protein; Provisional
Probab=96.76 E-value=0.02 Score=57.80 Aligned_cols=145 Identities=12% Similarity=0.119 Sum_probs=78.5
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhh------ccC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINN------AVF 191 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~------~~~ 191 (337)
++.|+++|+++|++||+|+-++ .|=.+ | +...+| .||+ +.. ++.+.+.. .++
T Consensus 243 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 322 (461)
T PRK07482 243 WPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIG 322 (461)
T ss_pred HHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccc
Confidence 4468899999999999999976 33333 1 112222 2453 323 45444432 111
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-----cc
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-----LT 263 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-----~~ 263 (337)
.+.+-+.|+...|+..+.+..+.+ +...+++.+..++|.+.|.+. .+.++.. -...-+.-|.+.... .+
T Consensus 323 h~~T~~gnpl~~Aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~ 399 (461)
T PRK07482 323 HGWTYSGHPICAAAALANLDILER---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFD 399 (461)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCC
Confidence 111224566666666666666543 256777888888888888752 2322210 012234445443211 11
Q ss_pred -----hHHHHHHHhhcCceeccC---cccchh
Q psy10669 264 -----GSKVELVLEEIAIACNKN---TGISLA 287 (337)
Q Consensus 264 -----~~~~~~~L~~~gI~v~~~---~girig 287 (337)
+..+...|.+.||.+... ..+|+.
T Consensus 400 ~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~ 431 (461)
T PRK07482 400 PALKIGPQVSAAALERGVIARAMPHGDILGFA 431 (461)
T ss_pred hhhHHHHHHHHHHHHCCcEEecCCCCCEEEEe
Confidence 234556666789998532 246654
No 337
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=96.76 E-value=0.021 Score=56.87 Aligned_cols=163 Identities=10% Similarity=0.056 Sum_probs=87.1
Q ss_pred ccEEEEcCccc--ccc-cC---hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCch
Q psy10669 124 FDFLSSGTTCY--SRC-LD---YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEK 177 (337)
Q Consensus 124 pklII~~~S~~--~~~-~d---~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~ 177 (337)
...||+.+.-. ++. .| +++|+++|+++|++||+|+.|+ .|-.+ + +.+.+| -|++
T Consensus 199 iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~pigav 278 (421)
T PRK09792 199 VAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGV 278 (421)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCCceEEE
Confidence 35777775321 222 25 6678899999999999999987 32222 1 111122 2333
Q ss_pred hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEE
Q psy10669 178 ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLI 253 (337)
Q Consensus 178 i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v 253 (337)
+.. ++.+.+.......++ +.++...++..+.+..+.+ ....+++.+..++|.+.|.+. .+..+.. -...-++
T Consensus 279 ~~~~~i~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~ 354 (421)
T PRK09792 279 VGNANIMDAPAPGGLGGTY-AGNPLAVAAAHAVLNIIDK---ESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMI 354 (421)
T ss_pred EEcHHHHhccCCCCcCCCC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEE
Confidence 222 455555433333334 3444555544455555532 256677778888888777651 2221211 1123456
Q ss_pred EEEecCCC------cchHHHHHHHhhcCceeccC----cccchhhhh
Q psy10669 254 LIDLRKNK------LTGSKVELVLEEIAIACNKN----TGISLAAEI 290 (337)
Q Consensus 254 ~V~~~~~~------~~~~~~~~~L~~~gI~v~~~----~girig~~~ 290 (337)
.|.+.+.. .....+...+.+.||.+... ..|||.-+.
T Consensus 355 ~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l 401 (421)
T PRK09792 355 AAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPL 401 (421)
T ss_pred EEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCC
Confidence 66664321 12344555666779998532 267776443
No 338
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=96.74 E-value=0.017 Score=57.72 Aligned_cols=145 Identities=13% Similarity=0.175 Sum_probs=79.7
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc-e---------e----eeecc--CCch----hhh--hHHHHHhhccCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA-G---------V----KGVTK--TGEK----ILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~----~~T~~--~Gg~----i~~--~l~~~i~~~~~p~~~g~ 197 (337)
+++|+++|+++|+++|+|+.|+ |+-- | + .+..| .||+ +++ ++.+.+.......++ +
T Consensus 221 l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~-~ 298 (425)
T PRK07495 221 MKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTY-G 298 (425)
T ss_pred HHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEeehhhhcCCccceEEEEcHHHHhccCCCCcCCCC-C
Confidence 4568899999999999999996 5411 1 0 11112 1343 222 455555443333334 3
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCCc---c---hHHHH
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNKL---T---GSKVE 268 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~~---~---~~~~~ 268 (337)
.++...++..+++..+.+ ..+.+++.+..++|+++|++. .+..+.. -...-++.|.+.+... + ...+.
T Consensus 299 ~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~ 375 (425)
T PRK07495 299 GNPLGIAAAHAVLDVIEE---EDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVR 375 (425)
T ss_pred CCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHH
Confidence 555666665566666533 357778888888888888762 2222210 0123455566643210 1 23445
Q ss_pred HHHhhcCceeccC----cccchhhh
Q psy10669 269 LVLEEIAIACNKN----TGISLAAE 289 (337)
Q Consensus 269 ~~L~~~gI~v~~~----~girig~~ 289 (337)
+.+.+.|+.+... ..|||.-|
T Consensus 376 ~~~~~~Gvl~~~~g~~~~~~r~~Pp 400 (425)
T PRK07495 376 LKALEKGLILLTCGVHGNVIRFLAP 400 (425)
T ss_pred HHHHHCCeEEeecCCCCCEEEEeCC
Confidence 5556679998642 14666533
No 339
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=96.73 E-value=0.024 Score=56.45 Aligned_cols=145 Identities=12% Similarity=0.125 Sum_probs=81.3
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc-e-------------eeeecc--CCch----hhh--hHHHHHhhccCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA-G-------------VKGVTK--TGEK----ILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-g-------------~~~T~~--~Gg~----i~~--~l~~~i~~~~~p~~~g~ 197 (337)
+++|+++|+++|++||+|+.|+ |+-- | +.+..| .||+ +++ ++.+.+.+.....++ +
T Consensus 221 l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~-~ 298 (421)
T PRK06777 221 MSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTY-A 298 (421)
T ss_pred HHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCC-C
Confidence 6678899999999999999997 5411 1 111112 1332 222 455555543332334 3
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEec-CCCCCeEEEEEecCC--Ccch----HHHH
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVT-GGTDVHLILIDLRKN--KLTG----SKVE 268 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~-~~t~~h~v~V~~~~~--~~~~----~~~~ 268 (337)
.++...++...++..+.+ ++..+++.++.++|.+.|++.. +.++. -....-+..+.+... +.+. ..+.
T Consensus 299 ~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~ 375 (421)
T PRK06777 299 GNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQ 375 (421)
T ss_pred cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHH
Confidence 577777777777766533 4678888899999999988731 11111 001222334434321 1111 2233
Q ss_pred HHHhhcCceeccCc----ccchhhh
Q psy10669 269 LVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 269 ~~L~~~gI~v~~~~----girig~~ 289 (337)
+.|.+.||.+.+.. -+||.-+
T Consensus 376 ~~~~~~Gv~i~~~~~~g~~lr~~pp 400 (421)
T PRK06777 376 RQALEEGLLLLSCGVHGNVIRFLYP 400 (421)
T ss_pred HHHHhCCeEEeecCCCCCEEEEeCC
Confidence 33456799987642 4777644
No 340
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=96.71 E-value=0.13 Score=50.17 Aligned_cols=161 Identities=14% Similarity=0.154 Sum_probs=99.5
Q ss_pred cEEEEc-Ccccc--cccChH---HHHHHhhhcCCeEEEeccccccccce-------------------eeeec-c-----
Q psy10669 125 DFLSSG-TTCYS--RCLDYA---RFRQICDETDSIMFADMSHISGLIAG-------------------VKGVT-K----- 173 (337)
Q Consensus 125 klII~~-~S~~~--~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~g-------------------~~~T~-~----- 173 (337)
.+|+.- ..-+| .|.+.+ +|.++.++.|.+-++|.| .-|+=.| +++.. |
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLY 251 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLY 251 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhh
Confidence 566653 22244 333333 567777889999999999 2232221 23333 2
Q ss_pred ---CCchhhh----h----HHHHHhhccCCCCCCCCcHHHHHHHHHHH-----HHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669 174 ---TGEKILY----D----YEEKINNAVFPSLQGGPHNHAIGAIATAM-----LQAQSDEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 174 ---~Gg~i~~----~----l~~~i~~~~~p~~~g~~~~~~iaala~a~-----~e~~~~~~~~y~~~v~~na~~l~~~L~ 237 (337)
.|++++. + +...+...++ .++|+|..|+.+-.+.-+ +...+.+-.++++++.+.-+.|.+.|+
T Consensus 252 gERVGa~~vva~~~~~a~~v~sqlk~~iR-~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~ 330 (396)
T COG1448 252 GERVGALSVVAEDAEEADRVLSQLKAIIR-TNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALK 330 (396)
T ss_pred hhccceeEEEeCCHHHHHHHHHHHHHHHH-hccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3777652 2 2234444444 456778777765444332 222244567899999999999999999
Q ss_pred hC----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhHhhhC
Q psy10669 238 KR----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISG 295 (337)
Q Consensus 238 ~~----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~t~~G 295 (337)
+. .|+.+. .+... ++-.|++..++.++.++.||++-++. ||++.-++..+
T Consensus 331 ~~~~~~~f~~i~----~Q~GM--Fsy~Gls~~QV~rLree~~IY~v~sG--Ri~vaGl~~~n 384 (396)
T COG1448 331 ALGAPRNFDFII----SQRGM--FSYTGLSPEQVDRLREEFGIYLVASG--RINVAGLNTSN 384 (396)
T ss_pred hhCCCcccchHh----hcCce--eecCCCCHHHHHHHHHhccEEEecCC--eeeeccCChhh
Confidence 93 455443 22233 23348899999999999999988754 77766666443
No 341
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=96.64 E-value=0.023 Score=57.40 Aligned_cols=94 Identities=13% Similarity=0.125 Sum_probs=53.2
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~~ 198 (337)
+++++++|+++|++||+|+=++ .|=.+ | ++..+| -|+++.. ++ +.+++.....+++ .
T Consensus 254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~-g 331 (464)
T PRK06938 254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFR-G 331 (464)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccCCCCCCCCCC-c
Confidence 4468899999999999999976 33233 1 111222 2333322 22 2222222223333 4
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
|+...|+..+.+..+.+ .+..+++.+..++|.+.|.+
T Consensus 332 npla~Aaa~a~L~~l~~---~~l~~~~~~~G~~l~~~L~~ 368 (464)
T PRK06938 332 NQMAMAAGSATLRYIKE---HRLAEHAAAMGERLREHLRQ 368 (464)
T ss_pred CHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHH
Confidence 55555555555655533 35667788888888888876
No 342
>PRK07483 hypothetical protein; Provisional
Probab=96.63 E-value=0.012 Score=59.11 Aligned_cols=137 Identities=14% Similarity=0.177 Sum_probs=74.4
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc--cC-C-C
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA--VF-P-S 193 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~--~~-p-~ 193 (337)
++.++++|+++|++||+|+-|+ .|-.+ + +...+| .||+ +.. ++.+.+... .+ . .
T Consensus 223 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~ 302 (443)
T PRK07483 223 FKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGH 302 (443)
T ss_pred HHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCC
Confidence 5678999999999999999987 33333 1 111222 2454 222 455555432 11 1 2
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEEEEEecCCC-----c---
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLILIDLRKNK-----L--- 262 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~~-----~--- 262 (337)
++ +.|+...|+..+.+..+.+ ....+++.+..++|.+.|++ ..+.++.. -...-+.-|.+.... .
T Consensus 303 T~-~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~ 378 (443)
T PRK07483 303 TY-LGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPA 378 (443)
T ss_pred CC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCch
Confidence 22 3455566555555555533 35678888888999888875 23332210 011223334442110 0
Q ss_pred --chHHHHHHHhhcCceecc
Q psy10669 263 --TGSKVELVLEEIAIACNK 280 (337)
Q Consensus 263 --~~~~~~~~L~~~gI~v~~ 280 (337)
....+.+.+.+.|+.+.+
T Consensus 379 ~~~~~~~~~~~~~~Gll~~~ 398 (443)
T PRK07483 379 LKLHARIKREAMARGLMVYP 398 (443)
T ss_pred hhHHHHHHHHHHHCCcEEEe
Confidence 123455566677999864
No 343
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=96.57 E-value=0.036 Score=60.22 Aligned_cols=159 Identities=12% Similarity=0.129 Sum_probs=94.5
Q ss_pred cCcccccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeee-----------ccCCchhhh--hHHHHH-
Q psy10669 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGV-----------TKTGEKILY--DYEEKI- 186 (337)
Q Consensus 130 ~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-----------~~~Gg~i~~--~l~~~i- 186 (337)
.+..++...|+++|.+++|+.|++++|++-..++.+- | +.+. +|..|++.+ ++..++
T Consensus 202 ~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lP 281 (939)
T TIGR00461 202 YPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMP 281 (939)
T ss_pred CCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCC
Confidence 3556677779999999999999999998777664443 1 1221 233455543 222210
Q ss_pred --------hh---------------ccCCCCCCCCcHH---HHHHHHHH--HHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 187 --------NN---------------AVFPSLQGGPHNH---AIGAIATA--MLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 187 --------~~---------------~~~p~~~g~~~~~---~iaala~a--~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
+. .++-. -+|+|.- .+.++.++ +..+-....++.++++..++.+|++.|.+
T Consensus 282 grivG~s~D~~G~~~~~l~LqtReqhIrRe-kAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~ 360 (939)
T TIGR00461 282 GRIVGVSKDALGNTALRLALQTREQHIRRD-KATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN 360 (939)
T ss_pred CCceeEEecCCCCccceeeccccccccccc-ccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 01000 1333322 22222223 22332233578899999999999999999
Q ss_pred CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhhHh
Q psy10669 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEIQA 292 (337)
Q Consensus 239 ~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~~t 292 (337)
.|+++... .--..+.|.+.. .+..++.+.|.+.||.++... .+++...+.+
T Consensus 361 ~G~~~~~~-~fF~~~~v~~~~--~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~ 413 (939)
T TIGR00461 361 DPHELINK-TWFDTLTVKVGN--GISSELLKAAEEFNINLRAVDTTTVGIALDETT 413 (939)
T ss_pred CCCcccCC-CccceEEEEeCC--CCHHHHHHHHHHCCCeeeecCCCEEEEEeecCC
Confidence 99999863 222345555532 256778888888899987643 4677554443
No 344
>PRK05965 hypothetical protein; Provisional
Probab=96.55 E-value=0.031 Score=56.43 Aligned_cols=147 Identities=13% Similarity=0.080 Sum_probs=77.9
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc------cC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA------VF 191 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~------~~ 191 (337)
++.++++|+++|++||+|+-++ .|=.+ | +...+| .||+ +.. ++.+.+... .+
T Consensus 238 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 317 (459)
T PRK05965 238 LKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVG 317 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhcccccccccc
Confidence 3468899999999999999976 33333 1 111122 2454 333 455544321 11
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-----c--
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-----L-- 262 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-----~-- 262 (337)
.+.+-+.|+...|+....+..+.+ +...+++.+..++|.+.|++. .+.++.. -...-++-|.+.... .
T Consensus 318 h~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~ 394 (459)
T PRK05965 318 HGYTYSAHPVSAAVGLEVLRLYHE---GGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDA 394 (459)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCc
Confidence 222223556666665555655533 356778888888888888773 1222210 012223344442211 0
Q ss_pred ---chHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 263 ---TGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 263 ---~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
-...+...+.+.|+.+.+.. -||+.-+
T Consensus 395 ~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~Pp 426 (459)
T PRK05965 395 ALDPADRIFDRAYANGLVFRAFGDGVLGFAPA 426 (459)
T ss_pred hhHHHHHHHHHHHhCCeEEEecCCcEEEEECC
Confidence 12345555667799987532 3665433
No 345
>PRK07480 putative aminotransferase; Validated
Probab=96.50 E-value=0.017 Score=58.24 Aligned_cols=146 Identities=14% Similarity=0.099 Sum_probs=79.3
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch------hhh-hHHHHHh--hc--cCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK------ILY-DYEEKIN--NA--VFPS 193 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~------i~~-~l~~~i~--~~--~~p~ 193 (337)
++.|++||+++|++||+|+-|+ .|=.+ |+ ...+| .||+ +.. ++.+.+. .. ...+
T Consensus 242 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 321 (456)
T PRK07480 242 WPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGF 321 (456)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCC
Confidence 6679999999999999999995 43333 11 11122 2443 333 4555442 22 1223
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH-HHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-----c---
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV-KANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-----L--- 262 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v-~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-----~--- 262 (337)
++ +.|+...|+...++..+.+ +...+++ .+..++|.+.|++. .+.++.. -...-+.-|.+.... .
T Consensus 322 T~-~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~ 397 (456)
T PRK07480 322 TY-SGHPVAAAVALANLRILRD---EGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAG 397 (456)
T ss_pred CC-CcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcch
Confidence 34 4557777777777766643 2466777 47888888888762 1221110 011123333342211 0
Q ss_pred --chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 263 --TGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 263 --~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
....+...+.+.||.+.... .+||.-+
T Consensus 398 ~~~~~~~~~~~~~~Gll~~~~~~~l~~~Pp 427 (456)
T PRK07480 398 GGVGTICRDHCFANGLIMRAVGDRMIISPP 427 (456)
T ss_pred hhHHHHHHHHHHHCCcEEeecCCEEEEECC
Confidence 12345555667799997532 5666533
No 346
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=96.41 E-value=0.032 Score=55.99 Aligned_cols=146 Identities=8% Similarity=0.037 Sum_probs=77.0
Q ss_pred ChHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc-------CCchhhh-hHHHHHhhccCCCCCCC
Q psy10669 139 DYARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK-------TGEKILY-DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~ 197 (337)
=++.++++|+++|++||+|+-++ .|=.+ ++ ...+| -|+++.. ++ +.........++ +
T Consensus 228 yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~~-~~~~~~~~~~T~-~ 305 (442)
T TIGR00709 228 WLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPEF-DAWQPAGHTGTF-R 305 (442)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCCcccEEEEEchHH-hccCCCcCCCCC-C
Confidence 34568899999999999999986 33333 11 11122 2233322 32 222222222223 4
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC--------c----
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK--------L---- 262 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~--------~---- 262 (337)
.|+...++..+++..+.+ +...+++.++.++|.+.|++. .+.++.. -...-++-|.+.+.. .
T Consensus 306 gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~ 382 (442)
T TIGR00709 306 GNQLAMVTGTEALNYWKD---DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDC 382 (442)
T ss_pred cCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcch
Confidence 566666666666665543 245678888888888888762 3332220 012223444443211 0
Q ss_pred -chHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669 263 -TGSKVELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 263 -~~~~~~~~L~~~gI~v~~~~----girig~~ 289 (337)
....+...+.+.|+.+.+.. .||+.-+
T Consensus 383 ~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Pp 414 (442)
T TIGR00709 383 ELAAAIQGACFENGLLLETGGREGEVFRLLCP 414 (442)
T ss_pred HHHHHHHHHHHHCCeEEeecCCCCCEEEEECC
Confidence 12345555667799986431 4566444
No 347
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.39 E-value=0.057 Score=54.41 Aligned_cols=144 Identities=13% Similarity=0.074 Sum_probs=77.5
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc-----c-C
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA-----V-F 191 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~-----~-~ 191 (337)
++.++++|+++|++||+|+-++ .|=.+ | +...+| .||+ +.. ++.+.+... . .
T Consensus 245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~ 324 (453)
T PRK06943 245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLH 324 (453)
T ss_pred HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccC
Confidence 4468899999999999999975 44333 1 111222 2454 222 455544321 1 1
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-c---chH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-L---TGS 265 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-~---~~~ 265 (337)
..++ +.|+...|+..+.+..+.+ +...+++.+..++|.+.|++. .+..+.. -...-+.-|.+.... . ...
T Consensus 325 ~~T~-~gnpl~~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~ 400 (453)
T PRK06943 325 SHSY-TGNPLACRAALATLDLFAE---DDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSR 400 (453)
T ss_pred CCCC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHH
Confidence 1223 2355666665555655543 246778888888888888773 1211110 011223445554211 0 123
Q ss_pred HHHHHHhhcCceeccC-cccchh
Q psy10669 266 KVELVLEEIAIACNKN-TGISLA 287 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~~-~girig 287 (337)
.+.+.+.+.||.+.+. ..+||.
T Consensus 401 ~i~~~~~~~Gll~~~~g~~l~~~ 423 (453)
T PRK06943 401 RFFEAALERELLLRPIGTTVYLM 423 (453)
T ss_pred HHHHHHHHCCcEEEecCCEEEEe
Confidence 4556666789998763 246665
No 348
>KOG2040|consensus
Probab=96.34 E-value=0.088 Score=54.41 Aligned_cols=152 Identities=16% Similarity=0.177 Sum_probs=95.8
Q ss_pred cEEEEcCcccc-cccChHHHHHHhhhcCCeEEEeccccccccc----e-----ee-----eec--cC--C----chhh-h
Q psy10669 125 DFLSSGTTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----G-----VK-----GVT--KT--G----EKIL-Y 180 (337)
Q Consensus 125 klII~~~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-----~~-----~T~--~~--G----g~i~-~ 180 (337)
.+.|.-+|-++ +.-+++++.+|.+++|--++.|.|..-.-+| | |+ -|+ |. | |=|. .
T Consensus 683 a~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK 762 (1001)
T KOG2040|consen 683 ALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 762 (1001)
T ss_pred eeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCCccchh
Confidence 45555588887 8888999999999999999999998765554 1 11 111 22 1 2221 1
Q ss_pred -hHHHHHh--hccCCCC--------------CCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669 181 -DYEEKIN--NAVFPSL--------------QGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYH 242 (337)
Q Consensus 181 -~l~~~i~--~~~~p~~--------------~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~ 242 (337)
.|++.+- +-+.|+- +|++ .|..+.-+...|+-. ..++--+-.+-||+|++++|+.. |+
T Consensus 763 ~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa---~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Yk 838 (1001)
T KOG2040|consen 763 KHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSA---LILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH-YK 838 (1001)
T ss_pred hhccccCCCCCccCCCCCCCCCCccceeccCCCcc---eeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cc
Confidence 2333221 1111110 2332 233334444445433 33555666788999999999886 55
Q ss_pred Eec---CCCCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669 243 VVT---GGTDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 243 v~~---~~t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~ 280 (337)
++. .+.--|=.++|++. .|+.+.+++++|..+|+-...
T Consensus 839 il~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPT 883 (1001)
T KOG2040|consen 839 ILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPT 883 (1001)
T ss_pred eeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCc
Confidence 554 34678889999875 457788999999999987654
No 349
>KOG0629|consensus
Probab=96.31 E-value=0.13 Score=50.81 Aligned_cols=128 Identities=19% Similarity=0.236 Sum_probs=75.6
Q ss_pred ccEEEEc--CcccccccChHHHHHHhhhcCCeEEEeccccccccc---------ee------e-eecc-CC------chh
Q psy10669 124 FDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GV------K-GVTK-TG------EKI 178 (337)
Q Consensus 124 pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~------~-~T~~-~G------g~i 178 (337)
|-++-++ .++|+.--|+..+.+||++|+.++.||+|.+-|++- |+ + ..|| .| .++
T Consensus 254 Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l 333 (510)
T KOG0629|consen 254 PFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFL 333 (510)
T ss_pred CeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHH
Confidence 5555554 566899999999999999999999999999998876 21 1 1111 12 222
Q ss_pred hh--hHHHHHh---------hcc-----C----CCCCCCCcHHHH-HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669 179 LY--DYEEKIN---------NAV-----F----PSLQGGPHNHAI-GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 179 ~~--~l~~~i~---------~~~-----~----p~~~g~~~~~~i-aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~ 237 (337)
.. .+-+..+ +.. | -.+|-+-|.... ..+-.-.+- ...|+...++..++|+||.++|+
T Consensus 334 ~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG--~~Gfe~~v~k~~~lA~yl~~~lr 411 (510)
T KOG0629|consen 334 TREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKG--TQGFEAQVDKCLRLAEYLYDRLR 411 (510)
T ss_pred HHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHH
Confidence 21 1111111 100 0 112344344433 222222222 35678889999999999999999
Q ss_pred hC-CCEEecCCCCCeEE
Q psy10669 238 KR-GYHVVTGGTDVHLI 253 (337)
Q Consensus 238 ~~-G~~v~~~~t~~h~v 253 (337)
++ |+..+-.....|..
T Consensus 412 er~~~~~l~~~~pe~~n 428 (510)
T KOG0629|consen 412 EREGFEMLFELEPEHVN 428 (510)
T ss_pred hcccceehhcCCCceEE
Confidence 95 55655432233444
No 350
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=96.31 E-value=0.12 Score=51.54 Aligned_cols=144 Identities=10% Similarity=0.063 Sum_probs=75.1
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~~ 198 (337)
+++|+++|+++|++||+|+.++ .|-.+ + +.+..| -|+++.. ++.+.+.......++ +.
T Consensus 220 l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~-~~ 298 (420)
T TIGR00700 220 VPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTY-AG 298 (420)
T ss_pred HHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCC-Cc
Confidence 7789999999999999999975 22222 1 111112 2222222 455555443333334 34
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCCCeEEEEEecCCC--c-c---hHHH
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTDVHLILIDLRKNK--L-T---GSKV 267 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~~h~v~V~~~~~~--~-~---~~~~ 267 (337)
++...++..+++..+.+. .+.+++.+..++|++.|.+. + +.-+.+ . .-+..+.+.+.. . + ...+
T Consensus 299 ~pl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg-~-G~~~~i~~~~~~~~~~~~~~~~~l 373 (420)
T TIGR00700 299 NPLACAAALAVLAIIESE---GLIERARQIGRLVTDRLTTLKAVDPRIGDVRG-L-GAMIAVELVDPGTTEPDAGLAERI 373 (420)
T ss_pred CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEEeec-c-ceEEEEEEecCCCCCccHHHHHHH
Confidence 555555555556554332 45666666667777777652 2 111111 2 334445442211 0 1 2233
Q ss_pred HHHHhhcCceeccCc----ccchhhh
Q psy10669 268 ELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 268 ~~~L~~~gI~v~~~~----girig~~ 289 (337)
...+.+.||.+.+.. .|||.-+
T Consensus 374 ~~~~~~~Gv~i~p~~~f~~~lRl~p~ 399 (420)
T TIGR00700 374 ATAAHAAGLLLLTCGMFGNIIRFLPP 399 (420)
T ss_pred HHHHHHCCeEEeccCCCCCEEEEECC
Confidence 344456799987632 5777644
No 351
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=96.30 E-value=0.14 Score=50.60 Aligned_cols=152 Identities=6% Similarity=-0.024 Sum_probs=79.5
Q ss_pred ccEEEEcCccc--ccccChHH---HHHHhhhcCCeEEEeccccc--------cccc------eeeeec-c------CCch
Q psy10669 124 FDFLSSGTTCY--SRCLDYAR---FRQICDETDSIMFADMSHIS--------GLIA------GVKGVT-K------TGEK 177 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~--------Gli~------g~~~T~-~------~Gg~ 177 (337)
+++|++..-.+ +...+.++ |.++|+++++++++|+++.. .... .+.+|. | +-|+
T Consensus 180 ~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~ 259 (416)
T PRK09440 180 TGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGI 259 (416)
T ss_pred ceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEecccccCCCcceEEE
Confidence 45555542234 36666555 44678899999999999852 1111 112332 2 2355
Q ss_pred hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHH-----HHHHHHHHHHHHHHHHHh----CCCEEecC
Q psy10669 178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKS-----YQAQVKANASHLSDEMIK----RGYHVVTG 246 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~-----y~~~v~~na~~l~~~L~~----~G~~v~~~ 246 (337)
++. ++.+.+.....+... +++.....+++.++.. .++.. .++...++.+.+.+.|.+ .++.+...
T Consensus 260 ~i~~~~l~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p 335 (416)
T PRK09440 260 VIADEEIIEALSNMNGIISL-APGRLGPAIAAEMIES---GDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP 335 (416)
T ss_pred EeCCHHHHHHHHHHHHHhcc-CCCcHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecC
Confidence 544 466655543222212 2333333333343321 12221 122233444445555544 35655432
Q ss_pred CCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 247 GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
..+-.+++++...+.+..++.+.|.+.||.+.+
T Consensus 336 -~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~p 368 (416)
T PRK09440 336 -EGAIFLWLWFKDLPITTEELYQRLKARGVLVVP 368 (416)
T ss_pred -CCceEEEEECCCCCCCHHHHHHHHHHCCEEEec
Confidence 235567788865344667788888889999876
No 352
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=96.23 E-value=0.4 Score=48.38 Aligned_cols=179 Identities=12% Similarity=0.072 Sum_probs=100.3
Q ss_pred eeecCCCc-hhHHHHHHhhCCc-----------------------------------------ccc---cccEEEEcCcc
Q psy10669 99 NVQPYSGS-PANFAVCEKALPT-----------------------------------------NNA---RFDFLSSGTTC 133 (337)
Q Consensus 99 ~v~~~Sgt-~AN~~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~ 133 (337)
+|..+||+ +|...+...+++| +.. +||++++.++.
T Consensus 157 ~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 157 QIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred eEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 58899995 6777777888765 111 38999998655
Q ss_pred -c--ccccChH---HHHHHhhhcCCeEEEecccccc---------ccc-------eeeeecc-------CCchhhh--hH
Q psy10669 134 -Y--SRCLDYA---RFRQICDETDSIMFADMSHISG---------LIA-------GVKGVTK-------TGEKILY--DY 182 (337)
Q Consensus 134 -~--~~~~d~~---~l~eia~~~ga~l~vD~AH~~G---------li~-------g~~~T~~-------~Gg~i~~--~l 182 (337)
| +...+.+ +|-++|+++++++|=|+..+-= +.+ ..++|+. +-|+++. ++
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~ 316 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPEL 316 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHH
Confidence 3 3444544 4779999999999999985430 111 1244542 3477775 55
Q ss_pred HHHHhhc-cCCCCCCCCcHHHHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec--CCCCCeEEEEEec
Q psy10669 183 EEKINNA-VFPSLQGGPHNHAIGAIATAMLQ-AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT--GGTDVHLILIDLR 258 (337)
Q Consensus 183 ~~~i~~~-~~p~~~g~~~~~~iaala~a~~e-~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~--~~t~~h~v~V~~~ 258 (337)
.+++... ..-. . ++......+++.-+.+ ..+..-+..++...+.-+++.+.|.+.+-.... .....-.+++.+.
T Consensus 317 ~~~~~~~k~~~~-~-~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~ 394 (459)
T COG1167 317 IEKLLRLKQAAD-L-GPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELP 394 (459)
T ss_pred HHHHHHHHHHhc-C-CCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcC
Confidence 5544432 1111 1 2222222333222221 011222444555555666677777775432221 2222345566665
Q ss_pred CCCcchHHHHHHHhhcCceecc
Q psy10669 259 KNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 259 ~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
. +++..++...+.+.|+.+.+
T Consensus 395 ~-~~~~~~l~~~a~~~gv~i~~ 415 (459)
T COG1167 395 E-GIDARELLAAALEKGVVVTP 415 (459)
T ss_pred C-CCCHHHHHHHHHHCCCEEEc
Confidence 5 45777777777777888776
No 353
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=96.21 E-value=0.18 Score=50.24 Aligned_cols=158 Identities=15% Similarity=0.127 Sum_probs=88.3
Q ss_pred ccEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEeccccccc--cc--------ee---eeec-c--CCch---
Q psy10669 124 FDFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHISGL--IA--------GV---KGVT-K--TGEK--- 177 (337)
Q Consensus 124 pklII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~---~~T~-~--~Gg~--- 177 (337)
...||+. .++++.+. .++|.++|+++|+++|.|+.|. |+ .+ ++ ..|. | .||+
T Consensus 200 ~aavi~E-pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig 277 (425)
T PRK08088 200 IAAIIIE-PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLA 277 (425)
T ss_pred eEEEEEC-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhHHhhcCCCCCEEEEeccccCCCcce
Confidence 3566665 35554433 4568899999999999999988 32 11 10 1222 2 1333
Q ss_pred -hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCC-EEecCCCC
Q psy10669 178 -ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGY-HVVTGGTD 249 (337)
Q Consensus 178 -i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~-~v~~~~t~ 249 (337)
++. ++.+.+........+ +.++...++....+.... .....+++.+..+++.+.|.+ .+. .-+.+ .
T Consensus 278 ~v~~~~~~~~~~~~~~~~~t~-~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g-~- 351 (425)
T PRK08088 278 GVTGRAEVMDAIAPGGLGGTY-AGNPIACAAALAVLKVFE---QENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG-L- 351 (425)
T ss_pred eeEecHHHHhhcCCCCCCCCC-CcCHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec-c-
Confidence 333 566666554443333 345556666656565543 235666777777777777665 222 11111 2
Q ss_pred CeEEEEEecCC-------CcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669 250 VHLILIDLRKN-------KLTGSKVELVLEEIAIACNKN----TGISLAAE 289 (337)
Q Consensus 250 ~h~v~V~~~~~-------~~~~~~~~~~L~~~gI~v~~~----~girig~~ 289 (337)
.-+++|.+... ......+...|.+.||.+.+. ..|||+.+
T Consensus 352 G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~ 402 (425)
T PRK08088 352 GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVP 402 (425)
T ss_pred ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECC
Confidence 44567777321 112455666666779876532 26777654
No 354
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=96.14 E-value=1.3 Score=42.22 Aligned_cols=153 Identities=12% Similarity=0.029 Sum_probs=97.6
Q ss_pred ccEEEEc-Cc----ccccccChHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c------CCch
Q psy10669 124 FDFLSSG-TT----CYSRCLDYARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K------TGEK 177 (337)
Q Consensus 124 pklII~~-~S----~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~------~Gg~ 177 (337)
.-.|+++ +. +...+..+.+|..+|+++|+.|++|-|-+.-+=+ .+|... | +-|+
T Consensus 180 ~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GI 259 (417)
T COG3977 180 TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGI 259 (417)
T ss_pred cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCCCCcceeE
Confidence 3456654 22 2457777888889999999999999996654333 123322 2 3466
Q ss_pred hhh--hHHHHHhh-----ccCCCCCCCCcHHHHHHHHHHHHHHhc---hh-hHHHHHHHHHHHHHHHHHHHhCCCEEecC
Q psy10669 178 ILY--DYEEKINN-----AVFPSLQGGPHNHAIGAIATAMLQAQS---DE-FKSYQAQVKANASHLSDEMIKRGYHVVTG 246 (337)
Q Consensus 178 i~~--~l~~~i~~-----~~~p~~~g~~~~~~iaala~a~~e~~~---~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~ 246 (337)
++. .+.+.+.+ ++-|+..| ++||+-.+-.-++++ .- -+-|++++..-...|+.+|-+.-+.+..
T Consensus 260 iIane~viqaitnmn~iisLap~~~G----~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHk- 334 (417)
T COG3977 260 IIANEKVIQAITNMNGIISLAPGRMG----PAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHK- 334 (417)
T ss_pred EEccHHHHHHHHhccceeeecCCCcc----HHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeec-
Confidence 665 34443332 23344333 666665544333221 11 1457777777778888888887787876
Q ss_pred CCCCeEEEEE-ecCCCcchHHHHHHHhhcCceeccCc
Q psy10669 247 GTDVHLILID-LRKNKLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 247 ~t~~h~v~V~-~~~~~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
.+.-|.++. +.+..++..++..+|.+.|+.+-+-.
T Consensus 335 -pEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~ 370 (417)
T COG3977 335 -PEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGH 370 (417)
T ss_pred -CCcceeehhhhccCCCCHHHHHHHHHhCeEEEeccc
Confidence 455565544 67778899999999999999887644
No 355
>KOG1404|consensus
Probab=96.12 E-value=0.033 Score=54.28 Aligned_cols=151 Identities=13% Similarity=0.145 Sum_probs=82.0
Q ss_pred cccChHHHHHHhhhcCCeEEEeccccc-cccc---e----------------eeeeccCCchhhh-hHHHHHhhcc-CCC
Q psy10669 136 RCLDYARFRQICDETDSIMFADMSHIS-GLIA---G----------------VKGVTKTGEKILY-DYEEKINNAV-FPS 193 (337)
Q Consensus 136 ~~~d~~~l~eia~~~ga~l~vD~AH~~-Gli~---g----------------~~~T~~~Gg~i~~-~l~~~i~~~~-~p~ 193 (337)
-.+=+++.+++|+++|.++|.|+.|+. |=.+ | +..-.|-|+++.+ ++++-+++.. +-.
T Consensus 231 p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fn 310 (442)
T KOG1404|consen 231 PPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFN 310 (442)
T ss_pred CchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhcccccc
Confidence 445566788999999999999999874 2222 1 1111255777766 7888777655 333
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC--CCCCe--EEEEEecCCC-----c
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG--GTDVH--LILIDLRKNK-----L 262 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~--~t~~h--~v~V~~~~~~-----~ 262 (337)
++|+..+...+| .+.+++.. -+..+++..+-..+|.+.|.+ .+++++++ |.-=- +=+|+-+.+. .
T Consensus 311 TyggnP~a~avg--~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~ 386 (442)
T KOG1404|consen 311 TYGGNPVACAVG--LAVLKVIK--EENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATA 386 (442)
T ss_pred ccCCCchhHHHH--HHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchH
Confidence 454444433333 44455543 123444444445555555554 34555541 11000 1122222111 1
Q ss_pred chHHHHHHHhhcCceeccCc----ccchhhhh
Q psy10669 263 TGSKVELVLEEIAIACNKNT----GISLAAEI 290 (337)
Q Consensus 263 ~~~~~~~~L~~~gI~v~~~~----girig~~~ 290 (337)
-+..+.+.+.+.|+.|++-. -+||.=|.
T Consensus 387 ~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPl 418 (442)
T KOG1404|consen 387 EGAVIGEQCKELGVLVGKGGIHGNVFRIAPPL 418 (442)
T ss_pred HHHHHHHHHHHhCeeeecccccceEEEecCCe
Confidence 23456677778899998755 57776553
No 356
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.09 E-value=0.13 Score=52.05 Aligned_cols=146 Identities=13% Similarity=0.106 Sum_probs=72.9
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc-----cCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA-----VFP 192 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~-----~~p 192 (337)
++.++++|+++|++||+|+-++ .|-.+ | +...+| .||+ +.. ++.+.+... .+.
T Consensus 260 l~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h 339 (472)
T PRK08742 260 LRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLH 339 (472)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCc
Confidence 4568899999999999999986 45444 1 112223 2454 222 454444321 111
Q ss_pred -CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc-------
Q psy10669 193 -SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL------- 262 (337)
Q Consensus 193 -~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~------- 262 (337)
.++ +.|+...|+....+..+.++ ...+++.+..++|.+.+... .+.++.. -...-+.-|.+....-
T Consensus 340 ~~T~-~gnpl~~Aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~ 415 (472)
T PRK08742 340 SHSY-TGNPLACAAALATLDIFADD---DVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPP 415 (472)
T ss_pred CCCC-CccHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCc
Confidence 122 24566666666666655432 34555555566665444331 1222210 0112233333322110
Q ss_pred c---hHHHHHHHhhcCceeccC-cccchhhh
Q psy10669 263 T---GSKVELVLEEIAIACNKN-TGISLAAE 289 (337)
Q Consensus 263 ~---~~~~~~~L~~~gI~v~~~-~girig~~ 289 (337)
+ +..+.+.+.+.||.+.+. .-|||.-|
T Consensus 416 ~~~~~~~~~~~~~~~Gll~~~~g~vi~~~Pp 446 (472)
T PRK08742 416 AARVGLHAYRAALARGVVLRPLGDVLYWMPP 446 (472)
T ss_pred hhHHHHHHHHHHHHCCeEEEecCCEEEEECC
Confidence 0 134455566779998764 25666544
No 357
>PRK06148 hypothetical protein; Provisional
Probab=96.02 E-value=0.087 Score=58.34 Aligned_cols=146 Identities=10% Similarity=0.115 Sum_probs=79.5
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc---------e----eeeec-------cCCchhhh-hHHHHHhhcc-CCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA---------G----VKGVT-------KTGEKILY-DYEEKINNAV-FPSLQG 196 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g----~~~T~-------~~Gg~i~~-~l~~~i~~~~-~p~~~g 196 (337)
++.++++|+++|+++|+|+-|+ .|=.| | ++..+ |-|+++.. ++.+.+++.. +-++++
T Consensus 807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~ 886 (1013)
T PRK06148 807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFG 886 (1013)
T ss_pred HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHHhhccCCCccccCCC
Confidence 5678999999999999999985 44333 1 11112 23344433 5666555432 223343
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC----cc---hHH
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK----LT---GSK 266 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~----~~---~~~ 266 (337)
.|+...|+..+.+..+.+ +...+++.+..++|.++|++. .+.+++. -...-++-|.+.... -+ ...
T Consensus 887 -gnpla~aaa~a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~ 962 (1013)
T PRK06148 887 -GNPVSCAIGLAVLDIIED---EDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARY 962 (1013)
T ss_pred -CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHH
Confidence 355555555555555532 256788888888888888772 2222210 011223334443211 01 234
Q ss_pred HHHHHhhcCceeccCc----ccchhhh
Q psy10669 267 VELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~~----girig~~ 289 (337)
+...|.+.||.+.... -|||.-+
T Consensus 963 i~~~~~~~Gvl~~~~g~~~~vlr~~Pp 989 (1013)
T PRK06148 963 VKNGARERGILIGTEGPHDNVLKIRPP 989 (1013)
T ss_pred HHHHHHhCCeEEeccCCCCCEEEEeCC
Confidence 4555666799997532 4666544
No 358
>PRK09275 aspartate aminotransferase; Provisional
Probab=95.99 E-value=0.83 Score=47.01 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=25.5
Q ss_pred ccEEEE-cCcc-cccccChHH---HHHHhhh--cCCeEEEecccc
Q psy10669 124 FDFLSS-GTTC-YSRCLDYAR---FRQICDE--TDSIMFADMSHI 161 (337)
Q Consensus 124 pklII~-~~S~-~~~~~d~~~---l~eia~~--~ga~l~vD~AH~ 161 (337)
+|+|++ ++++ -+...+-++ |.++|++ ++.+++.|++..
T Consensus 242 tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~ 286 (527)
T PRK09275 242 IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG 286 (527)
T ss_pred CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh
Confidence 677665 4544 247777555 5566743 599999999864
No 359
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=95.97 E-value=0.19 Score=49.42 Aligned_cols=148 Identities=16% Similarity=0.194 Sum_probs=89.9
Q ss_pred ccEEEEcCcc--cccccC-hHHHHHHhhhcCCeEEEeccccc---------------cccce-eeeec-----cCCchhh
Q psy10669 124 FDFLSSGTTC--YSRCLD-YARFRQICDETDSIMFADMSHIS---------------GLIAG-VKGVT-----KTGEKIL 179 (337)
Q Consensus 124 pklII~~~S~--~~~~~d-~~~l~eia~~~ga~l~vD~AH~~---------------Gli~g-~~~T~-----~~Gg~i~ 179 (337)
+.+.|++..+ +|+.-| +.+|.+||+++|++.+|.-|=+. |-+.. +.+|. |.||-++
T Consensus 155 ~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~ 234 (389)
T PF05889_consen 155 NILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIM 234 (389)
T ss_dssp GEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEE
T ss_pred CeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEE
Confidence 5666666433 588888 99999999999999999999887 77773 56665 4676665
Q ss_pred h----hHHHHHhhccCCCCCCC-CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCC
Q psy10669 180 Y----DYEEKINNAVFPSLQGG-PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDV 250 (337)
Q Consensus 180 ~----~l~~~i~~~~~p~~~g~-~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~ 250 (337)
+ .+...+... ||+..+. |... +...++.+-...|....++..++=.+|.++|++ .|-.+. ....|
T Consensus 235 As~~~~~i~~vs~~-YpGRas~sp~ld----~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll-~~p~N 308 (389)
T PF05889_consen 235 ASFDPSGILAVSKE-YPGRASASPSLD----LFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLL-ETPRN 308 (389)
T ss_dssp EESSHHHHHHHHHT-SHSHBTSHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBS-SSTT-
T ss_pred EecCHHHHHHHHHH-hhhhhhcccchH----HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCCCC
Confidence 4 355566654 7887433 3222 334444444456677777777777777777776 564443 22467
Q ss_pred eEEE-EEecCCC----cchHHHHHHHhhcCce
Q psy10669 251 HLIL-IDLRKNK----LTGSKVELVLEEIAIA 277 (337)
Q Consensus 251 h~v~-V~~~~~~----~~~~~~~~~L~~~gI~ 277 (337)
|+.+ +++.... -+...+...|...||.
T Consensus 309 ~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~Vs 340 (389)
T PF05889_consen 309 HISMAFTLDTLYEISQKDGTFLGSMLFKRGVS 340 (389)
T ss_dssp SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEE
T ss_pred CeeEEEECccchhhccchhhhHHHHHHhCCcc
Confidence 7643 3333211 1346777888876664
No 360
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=95.95 E-value=0.09 Score=52.85 Aligned_cols=147 Identities=10% Similarity=0.053 Sum_probs=74.8
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~~ 198 (337)
+++|+++|+++|++||.|+-++ .|-.+ + +.+..| -|+++.. ++.+.+.+......+ +.
T Consensus 242 l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~-~g 320 (451)
T PRK06918 242 VQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTY-AG 320 (451)
T ss_pred HHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCC-Cc
Confidence 6678999999999999999975 23222 1 111112 1332222 455555433332333 34
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEec-CC--Cc----chHHHH
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLR-KN--KL----TGSKVE 268 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~-~~--~~----~~~~~~ 268 (337)
++...++...++..+.+. ...+++.+..++|.++|++. ++.++.. ....-+..+.+. +. .. ....+.
T Consensus 321 ~~l~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~ 397 (451)
T PRK06918 321 SPLGCAAALAVLDIIEKE---NLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANIC 397 (451)
T ss_pred CHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHH
Confidence 555555555555555332 34555556666777766652 3322110 012223333332 11 11 233444
Q ss_pred HHHhhcCceeccC----cccchhhhh
Q psy10669 269 LVLEEIAIACNKN----TGISLAAEI 290 (337)
Q Consensus 269 ~~L~~~gI~v~~~----~girig~~~ 290 (337)
+.|.+.||.+.+. ..+||+.+.
T Consensus 398 ~~~~~~Gvlv~~~~~~~~~lrl~p~l 423 (451)
T PRK06918 398 KEANKRGLLLLSAGTYGNVIRVLMPL 423 (451)
T ss_pred HHHHHCCeEEeecCCCCCEEEEECCC
Confidence 5556789999763 257776543
No 361
>PRK06855 aminotransferase; Validated
Probab=95.91 E-value=2.1 Score=42.67 Aligned_cols=132 Identities=13% Similarity=0.073 Sum_probs=68.1
Q ss_pred cEE-EEcCcc-cccccChHHHH---HHhhhcCCeEEEeccccc----c--ccc---------e-eeeec--------cCC
Q psy10669 125 DFL-SSGTTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G--LIA---------G-VKGVT--------KTG 175 (337)
Q Consensus 125 klI-I~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G--li~---------g-~~~T~--------~~G 175 (337)
+++ ++++++ -+...+-+++. ++|+++|++++.|+++.- | ... . +.++. -+-
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRi 252 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRC 252 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceE
Confidence 444 455543 24777766554 678999999999998641 2 011 1 11221 134
Q ss_pred chhhh-------hHH---HHHhhccCCCCCCCCcHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669 176 EKILY-------DYE---EKINNAVFPSLQGGPHNHAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIKR-GYHV 243 (337)
Q Consensus 176 g~i~~-------~l~---~~i~~~~~p~~~g~~~~~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v 243 (337)
|+++. .+. +.+...... ..+++.+...+++.++.+- .+...++.++...++.+.+.+.|.+. |+.+
T Consensus 253 G~ii~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~ 330 (433)
T PRK06855 253 GWIEVYNADKDEVFKKYINSILNAKMI--EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKV 330 (433)
T ss_pred EEEEEeCCchhhHHHHHHHHHHHhhcc--ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeec
Confidence 66652 122 222222111 1233444555554444221 01123455666777788888888774 7665
Q ss_pred ecCCCCCeEEEEEecC
Q psy10669 244 VTGGTDVHLILIDLRK 259 (337)
Q Consensus 244 ~~~~t~~h~v~V~~~~ 259 (337)
.. ...+-.+++++..
T Consensus 331 ~~-p~gg~~~w~~l~~ 345 (433)
T PRK06855 331 NR-TNGAFYMTVVFED 345 (433)
T ss_pred cC-CCeeEEEeecccc
Confidence 43 2234567787764
No 362
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=95.86 E-value=0.79 Score=47.11 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=26.3
Q ss_pred ccEEE-EcCcc-cccccChHH---HHHHhhhc--CCeEEEecccc
Q psy10669 124 FDFLS-SGTTC-YSRCLDYAR---FRQICDET--DSIMFADMSHI 161 (337)
Q Consensus 124 pklII-~~~S~-~~~~~d~~~---l~eia~~~--ga~l~vD~AH~ 161 (337)
+|+|+ +++++ -+...+-++ |.++|+++ +.++|.|++..
T Consensus 241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~ 285 (521)
T TIGR03801 241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG 285 (521)
T ss_pred CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch
Confidence 57666 45654 247777555 45668876 99999999864
No 363
>KOG1401|consensus
Probab=95.83 E-value=0.25 Score=48.50 Aligned_cols=95 Identities=16% Similarity=0.138 Sum_probs=58.0
Q ss_pred HHHHHhhhcCCeEEEeccccc-cccc--------eee---ee-cc--CCc-----hhhh-hHHHHHhhccC--CCCCCCC
Q psy10669 142 RFRQICDETDSIMFADMSHIS-GLIA--------GVK---GV-TK--TGE-----KILY-DYEEKINNAVF--PSLQGGP 198 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~-Gli~--------g~~---~T-~~--~Gg-----~i~~-~l~~~i~~~~~--p~~~g~~ 198 (337)
.|+.+|+++|++||.|+=+.- |=.+ +++ .| .| .|| ++.. ++.+.+++.-- .+.+=+.
T Consensus 231 ~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~g 310 (433)
T KOG1401|consen 231 GLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSG 310 (433)
T ss_pred HHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCC
Confidence 377899999999999999762 2222 110 11 11 234 3333 46666665421 1211133
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
|+-+..+...++.++.++ +..++|-+..+.|++.|.+.
T Consensus 311 npLacsa~~~~l~~l~~~---e~~k~vs~~~k~L~~~l~e~ 348 (433)
T KOG1401|consen 311 NPLACSAGIKVLDELKDP---ETLKNVSKIGKELRKLLDEY 348 (433)
T ss_pred ChhhhhHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHH
Confidence 455555666667777664 55788888899999998884
No 364
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.82 E-value=0.035 Score=56.12 Aligned_cols=144 Identities=15% Similarity=0.105 Sum_probs=77.8
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchh------hh-hHHHHHhh------cc-
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKI------LY-DYEEKINN------AV- 190 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~------~~- 190 (337)
++.++++|+++|++||+|+-++ .|=.+ + +...+| .||++ .. ++.+.+.. ..
T Consensus 238 l~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~ 317 (466)
T PRK07030 238 LKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFL 317 (466)
T ss_pred HHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccc
Confidence 5578899999999999999975 44333 1 111122 24542 22 45554432 11
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc------
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL------ 262 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~------ 262 (337)
...++ +.|+...|+..+.+..+.+ +...+++.+..++|.+.|++. .+..+.. -...-++-|.+.....
T Consensus 318 h~~T~-~gnpla~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~ 393 (466)
T PRK07030 318 HSHSY-TGNPLACAAALATLDIFEQ---DNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYP 393 (466)
T ss_pred cCCCC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCc
Confidence 12223 3466666666666666543 246778888888888888763 1222210 0112233444422110
Q ss_pred -c---hHHHHHHHhhcCceeccC-cccchh
Q psy10669 263 -T---GSKVELVLEEIAIACNKN-TGISLA 287 (337)
Q Consensus 263 -~---~~~~~~~L~~~gI~v~~~-~girig 287 (337)
+ ...+.+.+.+.|+.+.+. ..+|+.
T Consensus 394 ~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~ 423 (466)
T PRK07030 394 WQERRGLKVYQHALERGALLRPLGSVVYFL 423 (466)
T ss_pred chhHHHHHHHHHHHHCCeEEEecCCEEEEE
Confidence 1 134555666779998763 256664
No 365
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=95.80 E-value=0.55 Score=44.65 Aligned_cols=186 Identities=24% Similarity=0.270 Sum_probs=103.4
Q ss_pred HHHHHHHhhhhhhccCCC-CCCCcCcCccchH--HHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-
Q psy10669 44 LAVLECLGSCLQNKYSEG-LPGKRYYGGNQFI--DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT- 119 (337)
Q Consensus 44 p~V~~a~~~~l~~~y~~g-~~g~r~~~G~~~~--~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~- 119 (337)
..|++|... .|-++. ..|+.-| |..++ |.|| +--++.||++.+- +.+|+.|||+|.-.++.++++|
T Consensus 38 ~kVL~AF~~---~rvs~~hf~~stGY-GydD~GRdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpg 107 (416)
T COG4100 38 KKVLEAFRH---HRVSESHFTGSTGY-GYDDLGRDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPG 107 (416)
T ss_pred HHHHHHHHh---cccchhccCCCCCC-CccccchhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCC
Confidence 356677754 233332 2233333 33333 5566 3558999999841 3477899999998889999876
Q ss_pred ---------------------------------------------------ccc---cccEEEEcCcc-ccc--ccChHH
Q psy10669 120 ---------------------------------------------------NNA---RFDFLSSGTTC-YSR--CLDYAR 142 (337)
Q Consensus 120 ---------------------------------------------------~~a---~pklII~~~S~-~~~--~~d~~~ 142 (337)
+.+ ++|+|-+--|- |+. ...+++
T Consensus 108 Dell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~e 187 (416)
T COG4100 108 DELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAE 187 (416)
T ss_pred CeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHH
Confidence 001 26888775333 542 234444
Q ss_pred HHH---Hhhhc--CCeEEEecccc------------ccccce-----eeeec-cCCchhhh--hHHHHHh-hccCCCCC-
Q psy10669 143 FRQ---ICDET--DSIMFADMSHI------------SGLIAG-----VKGVT-KTGEKILY--DYEEKIN-NAVFPSLQ- 195 (337)
Q Consensus 143 l~e---ia~~~--ga~l~vD~AH~------------~Gli~g-----~~~T~-~~Gg~i~~--~l~~~i~-~~~~p~~~- 195 (337)
|.+ +.++. +.++.||-+-+ +-|++| ..++. +.||+|.+ ++.+.-. +-.-|++.
T Consensus 188 I~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~ 267 (416)
T COG4100 188 IEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGR 267 (416)
T ss_pred HHHHHHHHHhcCCCEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccc
Confidence 444 44554 78899998731 223332 01111 45788776 4544322 11246662
Q ss_pred -CCCcHHHHHHHHHHHHHHhchhh--HHHHHHHHHHHHHHHHHHHhCCCEEecC
Q psy10669 196 -GGPHNHAIGAIATAMLQAQSDEF--KSYQAQVKANASHLSDEMIKRGYHVVTG 246 (337)
Q Consensus 196 -g~~~~~~iaala~a~~e~~~~~~--~~y~~~v~~na~~l~~~L~~~G~~v~~~ 246 (337)
+++.... +++|-+--| +....|-++-+...+.-|.+.|+++-..
T Consensus 268 e~Gat~~~-------l~~myqGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P~ 314 (416)
T COG4100 268 EGGATLYS-------LREMYQGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNPK 314 (416)
T ss_pred cccccHHH-------HHHHHhhhccchHHHHHHhhhhHHHHHHHHHcCCCCCCc
Confidence 3322222 333322111 3456677777887888888899998763
No 366
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=95.57 E-value=0.87 Score=44.23 Aligned_cols=246 Identities=17% Similarity=0.170 Sum_probs=129.1
Q ss_pred eeeccCCCCCHHHHHHHhhhhhhccCCCC-CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC--chhHH
Q psy10669 34 ELIASENFTSLAVLECLGSCLQNKYSEGL-PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG--SPANF 110 (337)
Q Consensus 34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~-~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg--t~AN~ 110 (337)
|.-|--..++|+|++.....+.+--+.|. ...+.+++-... ++-..+++.+.++++.++. | .|.|..| |...-
T Consensus 8 nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~-~v~~~a~~~lreLl~iPd~-Y--~VlflqGGat~qf~ 83 (365)
T COG1932 8 NFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFK-NVLEEAEKDLRELLNIPDD-Y--KVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHH-HHHHHHHHHHHHHhCCCCC-c--eEEEEcCccHHHHH
Confidence 34444556799999988877665444342 233444443332 2333455788899999874 2 4666444 55655
Q ss_pred HHHHhhCCc----------------ccc----c-ccEEEEc--CcccccccChHHHHHHhh-------------------
Q psy10669 111 AVCEKALPT----------------NNA----R-FDFLSSG--TTCYSRCLDYARFRQICD------------------- 148 (337)
Q Consensus 111 ~v~~aLl~~----------------~~a----~-pklII~~--~S~~~~~~d~~~l~eia~------------------- 148 (337)
++...|+.+ +.+ + |+++... .+.|+...|..... +.+
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~-~~~~~ayv~~~~NeTi~Gv~v~ 162 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD-FSDNDAYVHFCWNETISGVEVP 162 (365)
T ss_pred HHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc-cCCCccEEEEecCCcccceEcc
Confidence 556666543 001 1 2322221 22344444443211 111
Q ss_pred ---hc--CCeEEEeccccccccc--------eeeeec------cCC-ch-hhh-hHHHHHhhccCCCC------------
Q psy10669 149 ---ET--DSIMFADMSHISGLIA--------GVKGVT------KTG-EK-ILY-DYEEKINNAVFPSL------------ 194 (337)
Q Consensus 149 ---~~--ga~l~vD~AH~~Gli~--------g~~~T~------~~G-g~-i~~-~l~~~i~~~~~p~~------------ 194 (337)
.. +.++++|++ ++.++ ++...+ +.| ++ |+. ++.+++++.-.|.+
T Consensus 163 ~~p~~~~~~~~v~D~S--S~ilsr~iDvsk~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~ 240 (365)
T COG1932 163 ELPDIGSDGLLVADAS--SAILSRPIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSIFDYLTHADNGSM 240 (365)
T ss_pred CCCCCCCCceEEEecc--cHHhcCCCChhHcceEEEehhhccCccceEEEEEcHHHHhcccccCCchHhhchhhhccCCc
Confidence 11 177888887 44443 222222 223 11 223 45444433212322
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCCCEEec--CCCCCeE-EEEEecCCCcchHHHHHH
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRGYHVVT--GGTDVHL-ILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G~~v~~--~~t~~h~-v~V~~~~~~~~~~~~~~~ 270 (337)
+-||.+-.+.-+...++++++..+ ++..++-.++++.|.+.+.+.+|-.-. ..+-+.+ |+..+.+..++...+++.
T Consensus 241 yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~ea 320 (365)
T COG1932 241 YNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEA 320 (365)
T ss_pred cCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcHHHHHHHHHHH
Confidence 345555555555667788876555 677888889999999999997664221 2222332 344455556555555444
Q ss_pred HhhcCceeccCc----ccchh
Q psy10669 271 LEEIAIACNKNT----GISLA 287 (337)
Q Consensus 271 L~~~gI~v~~~~----girig 287 (337)
..+ |...-+-. |+|+.
T Consensus 321 e~~-gl~~lkGhr~vgGmRas 340 (365)
T COG1932 321 EAA-GLIYLKGHRSVGGLRAS 340 (365)
T ss_pred HHc-CCceeccccCCCceeee
Confidence 444 54443323 88875
No 367
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=95.49 E-value=0.054 Score=54.72 Aligned_cols=95 Identities=8% Similarity=0.091 Sum_probs=53.8
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch-----hhhhHHHHHhhccCCCCCCCCc
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK-----ILYDYEEKINNAVFPSLQGGPH 199 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~-----i~~~l~~~i~~~~~p~~~g~~~ 199 (337)
++.++++|+++|++||+|+-++ .|=.+ | +...+| .||+ +..+..+.+.+....+++ +.|
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~~~~~~~~~~~T~-~gn 326 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEFDAWQPGGHTGTF-RGN 326 (459)
T ss_pred HHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCcceeeeeeHHHHhhccCCCCCCCC-CCC
Confidence 4568899999999999999976 33233 1 112222 2342 222212333222222233 345
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
+...|+..+.+..+.+ +...+++.+..++|.+.|++
T Consensus 327 pla~aaala~L~~l~~---~~l~~~~~~~G~~l~~~L~~ 362 (459)
T PRK06931 327 QLAMATGLTTLKILKE---ENLAQNAAERGEWLKAQLAE 362 (459)
T ss_pred HHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH
Confidence 5565555555655533 24567788888888888876
No 368
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=94.64 E-value=0.1 Score=50.45 Aligned_cols=95 Identities=16% Similarity=0.227 Sum_probs=52.7
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchhh-----h-hHHHHHhhccCCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKIL-----Y-DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i~-----~-~l~~~i~~~~~p~~~g~~ 198 (337)
++.|+++|+++|++||+|+-++ .|=.+ + +...+| .||+-+ . ++.+.+++.-...+++ .
T Consensus 200 l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~-g 278 (339)
T PF00202_consen 200 LRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFG-G 278 (339)
T ss_dssp HHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTT-T
T ss_pred hhehcccccccccceecccccccccccCCccceecccccCcccccccchhhhhhcccccccchhhccccccccccccc-c
Confidence 3578999999999999999987 33333 1 111222 245322 2 3444333322222222 3
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
|+...++....+..+.+ .++.+++.+..++|.+.|++
T Consensus 279 ~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 279 NPLSCAAALATLEILEE---EDLLERVRELGERLREGLRE 315 (339)
T ss_dssp -HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHH
T ss_pred chHhhhhhhhHHHhhcc---HHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555533 24667788888888888776
No 369
>KOG1402|consensus
Probab=94.30 E-value=0.36 Score=46.34 Aligned_cols=152 Identities=18% Similarity=0.197 Sum_probs=77.5
Q ss_pred cccccChHHHHHHhhhcCCeEEEeccccccccc-e-------------eeeecc--CCchh-----hh--hHHHHHhhcc
Q psy10669 134 YSRCLDYARFRQICDETDSIMFADMSHISGLIA-G-------------VKGVTK--TGEKI-----LY--DYEEKINNAV 190 (337)
Q Consensus 134 ~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-g-------------~~~T~~--~Gg~i-----~~--~l~~~i~~~~ 190 (337)
.|-++=++..+|+|.+|+.++|+|+-|+ |+-- | +.--+| .||++ ++ |+.-.+++.-
T Consensus 224 vP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pge 302 (427)
T KOG1402|consen 224 VPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGE 302 (427)
T ss_pred eCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCc
Confidence 4667778899999999999999999985 2211 1 011112 47776 12 3433344433
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE------Eec-CCCCCeEEEEEecCCCcc
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH------VVT-GGTDVHLILIDLRKNKLT 263 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~------v~~-~~t~~h~v~V~~~~~~~~ 263 (337)
...++|+ |+-+.+.. +|.++.+.+ +...++-.+.-..|+.+|.+..-+ .+- .|--+-+++.....++.+
T Consensus 303 HgsTygg-NpLg~~va-iAalevi~e--ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~ 378 (427)
T KOG1402|consen 303 HGSTYGG-NPLGCAVA-IAALEVIVE--EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQD 378 (427)
T ss_pred cccccCC-ChHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchh
Confidence 2222322 33333333 333444331 234444444445555666653222 111 122233332222244456
Q ss_pred hHHHHHHHhhcCceeccCc--ccchhhhh
Q psy10669 264 GSKVELVLEEIAIACNKNT--GISLAAEI 290 (337)
Q Consensus 264 ~~~~~~~L~~~gI~v~~~~--girig~~~ 290 (337)
...+.-+|.+.|....+-. =||+.-|.
T Consensus 379 aw~~cl~lk~~g~LAkptH~~IiRfaPPL 407 (427)
T KOG1402|consen 379 AWDVCLALKENGLLAKPTHGNIIRFAPPL 407 (427)
T ss_pred HHHHHHcccccccccCCCCCCeEEecCCc
Confidence 6666666667788776543 57776443
No 370
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=93.65 E-value=0.27 Score=53.20 Aligned_cols=149 Identities=16% Similarity=0.124 Sum_probs=74.2
Q ss_pred hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchh------hh-hHHHHHhh-----ccCC
Q psy10669 140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKI------LY-DYEEKINN-----AVFP 192 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~-----~~~p 192 (337)
++.++++|+++|++||+|+-++ .|=.| | +...+| .||++ .. ++.+.+.. ..+.
T Consensus 608 l~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~h 687 (817)
T PLN02974 608 QRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLH 687 (817)
T ss_pred HHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCccc
Confidence 4468899999999999999865 22222 1 111122 25543 33 45444421 2223
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH----HHHHHh--CCCEEecC-CCCCeEEEEEecCC----C
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL----SDEMIK--RGYHVVTG-GTDVHLILIDLRKN----K 261 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l----~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~----~ 261 (337)
+.+=+.|+.+.|+...++..+.++ +..+++.++++.+ .+.|.+ ..++.++. -...-+.-|.+... +
T Consensus 688 g~Ty~gnpl~cAaala~L~~~~~~---~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~ 764 (817)
T PLN02974 688 GHSYTAHPMGCAAAAKALQWYKDP---STNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSG 764 (817)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccc
Confidence 333356777777777777776542 2334444444433 344421 11222220 01122444555322 1
Q ss_pred c---chHHHHHHHh-hcCceeccCc-ccchhhhhH
Q psy10669 262 L---TGSKVELVLE-EIAIACNKNT-GISLAAEIQ 291 (337)
Q Consensus 262 ~---~~~~~~~~L~-~~gI~v~~~~-girig~~~~ 291 (337)
+ .+..+.+.+. +.||.+++.. .|+|-.|..
T Consensus 765 ~~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~ 799 (817)
T PLN02974 765 YSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPT 799 (817)
T ss_pred cchHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCC
Confidence 1 1234555666 7899997632 455544443
No 371
>KOG0259|consensus
Probab=92.08 E-value=9.8 Score=37.48 Aligned_cols=142 Identities=16% Similarity=0.134 Sum_probs=82.2
Q ss_pred eeecCCC-chhHHHHHHhhCCc--------------------------------------------ccc--cc-cEEEEc
Q psy10669 99 NVQPYSG-SPANFAVCEKALPT--------------------------------------------NNA--RF-DFLSSG 130 (337)
Q Consensus 99 ~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------~~a--~p-klII~~ 130 (337)
+|..+|| ++|.-.++.+|.+| .++ ++ .+||.+
T Consensus 128 DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviN 207 (447)
T KOG0259|consen 128 DVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVIN 207 (447)
T ss_pred ceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeC
Confidence 4888888 89988888999654 111 24 466666
Q ss_pred Ccc-cccccCh---HHHHHHhhhcCCeEEEeccccccccce----eee---------e-c---c-------CCchhhh-h
Q psy10669 131 TTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIAG----VKG---------V-T---K-------TGEKILY-D 181 (337)
Q Consensus 131 ~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~g----~~~---------T-~---~-------~Gg~i~~-~ 181 (337)
+++ .+-..+. ++|.++|+++|.+++.|+==.==++++ .++ | + | +=|.|+. |
T Consensus 208 P~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD 287 (447)
T KOG0259|consen 208 PNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHD 287 (447)
T ss_pred CCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEec
Confidence 655 3444444 466688899999999998522111220 000 0 0 1 0122221 1
Q ss_pred ----HH-----HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE
Q psy10669 182 ----YE-----EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH 242 (337)
Q Consensus 182 ----l~-----~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~ 242 (337)
+. +.+.. |-.+..+|..-..+|+=--+.+--+..|.....-+..|+..-.+.|++ +|++
T Consensus 288 ~~gvf~~~~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~ 356 (447)
T KOG0259|consen 288 PRGVFRDTKVVQGIKN--FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLT 356 (447)
T ss_pred ccccccchHHHHHHHH--HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcc
Confidence 11 12221 123344566666666655555543444566677788899988999998 6776
No 372
>KOG3846|consensus
Probab=91.67 E-value=2.2 Score=40.81 Aligned_cols=150 Identities=14% Similarity=0.120 Sum_probs=95.6
Q ss_pred ccccChHHHHHHhhhcCCeEEEeccccccccc------eeee------------eccCCchhhh----------------
Q psy10669 135 SRCLDYARFRQICDETDSIMFADMSHISGLIA------GVKG------------VTKTGEKILY---------------- 180 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~------------T~~~Gg~i~~---------------- 180 (337)
+...|+.+|.+--+.-|+++=+|-||..|=+. ||-| .+--||+.+.
T Consensus 228 GQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwg 307 (465)
T KOG3846|consen 228 GQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWG 307 (465)
T ss_pred ccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhcc
Confidence 57888888885556679999999999999888 3211 1112333321
Q ss_pred -hHHH--------HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE--------
Q psy10669 181 -DYEE--------KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH-------- 242 (337)
Q Consensus 181 -~l~~--------~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~-------- 242 (337)
+... .+.+....+.+++|..+.++|+..+++-..+...++.+++-+-.+.||-..++. .|++
T Consensus 308 h~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl 387 (465)
T KOG3846|consen 308 HDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKL 387 (465)
T ss_pred CCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcce
Confidence 1111 122333444589999999999999887766555677777777777776554443 3443
Q ss_pred ---EecC-CC--CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchh
Q psy10669 243 ---VVTG-GT--DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLA 287 (337)
Q Consensus 243 ---v~~~-~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig 287 (337)
+.+. .+ ..-+..+-+++. ...+...|.+.|+.+.+-. +||++
T Consensus 388 ~~~IiTP~~~~erGcQLsl~Fssp---~~~vfqeL~krGv~~DkR~PNvIRvA 437 (465)
T KOG3846|consen 388 FFTIITPTSTDERGCQLSLYFSSP---TPKVFQELHKRGVIGDKRRPNVIRVA 437 (465)
T ss_pred eEEEeCCcccccccceEEEEeCCC---chHHHHHHHHcCeeccccCCCceEee
Confidence 3331 11 122555555543 3677888999999998755 88886
No 373
>KOG0256|consensus
Probab=91.30 E-value=6.8 Score=38.89 Aligned_cols=130 Identities=12% Similarity=0.195 Sum_probs=79.4
Q ss_pred cEEEEcCcc-cccccChHHHH---HHhhhcCCeEEEeccccccccce----------------------eeeeccC----
Q psy10669 125 DFLSSGTTC-YSRCLDYARFR---QICDETDSIMFADMSHISGLIAG----------------------VKGVTKT---- 174 (337)
Q Consensus 125 klII~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~g----------------------~~~T~~~---- 174 (337)
-+||+++|+ .+...+-+.|. ..|.+.++-+++|+==..-+++. +-++-|.
T Consensus 229 GvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~Glp 308 (471)
T KOG0256|consen 229 GVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLP 308 (471)
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCC
Confidence 588888877 46777777666 45678899999999755545441 1222221
Q ss_pred C---chhhh---hHHH---HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669 175 G---EKILY---DYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT 245 (337)
Q Consensus 175 G---g~i~~---~l~~---~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~ 245 (337)
| |.|.+ ++.. ++.. | +..++.--+.++++..= .+..+....+-.+++...-+++.+.|++.||.-..
T Consensus 309 GfRvGviYS~ne~VvsaA~kmss--f-~~vSs~tQ~~la~LLSD-~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~ 384 (471)
T KOG0256|consen 309 GFRVGVIYSNNEDVVSAATKMSS--F-GLVSSQTQYLLASLLSD-EEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLK 384 (471)
T ss_pred ceEEEEEEecChHHHHHHHHHhh--c-cCCcHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceee
Confidence 2 33333 2322 3322 2 22333333444444433 55543333677888999999999999999998875
Q ss_pred CCCCCeEEEEEecC
Q psy10669 246 GGTDVHLILIDLRK 259 (337)
Q Consensus 246 ~~t~~h~v~V~~~~ 259 (337)
. ...--++||++.
T Consensus 385 s-~AGlF~wvDlr~ 397 (471)
T KOG0256|consen 385 S-NAGLFCWVDLRK 397 (471)
T ss_pred c-CCeeEEEEEhHH
Confidence 2 445678899865
No 374
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=91.20 E-value=3.9 Score=40.98 Aligned_cols=38 Identities=8% Similarity=0.184 Sum_probs=27.0
Q ss_pred EEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccc
Q psy10669 126 FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGL 164 (337)
Q Consensus 126 lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl 164 (337)
++|-.++.++..-|+++|.+++|++|+++++ .+--..|
T Consensus 201 v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL 238 (429)
T PF02347_consen 201 VMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPNAL 238 (429)
T ss_dssp EEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCCGC
T ss_pred EEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHH
Confidence 4555588889999999999999999999988 6665433
No 375
>KOG0633|consensus
Probab=90.66 E-value=5 Score=37.62 Aligned_cols=167 Identities=13% Similarity=0.181 Sum_probs=92.0
Q ss_pred cccEEEEcCcccc--cccChHHHHHHhhhc-CCeEEEecccc--ccccc-----------eeeeeccC--C------chh
Q psy10669 123 RFDFLSSGTTCYS--RCLDYARFRQICDET-DSIMFADMSHI--SGLIA-----------GVKGVTKT--G------EKI 178 (337)
Q Consensus 123 ~pklII~~~S~~~--~~~d~~~l~eia~~~-ga~l~vD~AH~--~Gli~-----------g~~~T~~~--G------g~i 178 (337)
++|++.++.-..+ -.+-...|.+|-... +.+++||+|-+ +|+-. .+.-|..| | |+-
T Consensus 160 ~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~ 239 (375)
T KOG0633|consen 160 KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYG 239 (375)
T ss_pred cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeecc
Confidence 3888888733333 445555566665443 78999999953 45322 12223211 1 222
Q ss_pred hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEE
Q psy10669 179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILI 255 (337)
Q Consensus 179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V 255 (337)
.. .+++.++.+=-|+-.|.+ ...+|+++ +..-.-...+.+++.+++.-.+|.+.|.+ .+.+-+.|+.+...+++
T Consensus 240 ~~~~~ia~iln~~KaPYNiS~~--~s~~AL~A-ls~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi 316 (375)
T KOG0633|consen 240 AFPLSIAEILNRAKAPYNISVA--GSVAALAA-LSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILI 316 (375)
T ss_pred cccHHHHHHHHhccCCccccch--hHHHHHHh-cCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEE
Confidence 22 577778876667544321 22333322 22111123457888888888888888888 34443346688888888
Q ss_pred EecC--CCcchHHHHHHHhhcCceecc-Cc------ccch--hhhhHh
Q psy10669 256 DLRK--NKLTGSKVELVLEEIAIACNK-NT------GISL--AAEIQA 292 (337)
Q Consensus 256 ~~~~--~~~~~~~~~~~L~~~gI~v~~-~~------giri--g~~~~t 292 (337)
.+.. .+.+.......+.+.|+.|+- ++ .+|| ||++-+
T Consensus 317 ~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een 364 (375)
T KOG0633|consen 317 EVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN 364 (375)
T ss_pred EEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc
Confidence 7753 232223333333357998873 22 5565 776654
No 376
>KOG0628|consensus
Probab=90.48 E-value=9 Score=38.56 Aligned_cols=160 Identities=13% Similarity=0.092 Sum_probs=90.7
Q ss_pred ccEEEEc-Ccccc-cccChHHHHHHhhhcCCeEEEeccccccccc----------ee-------------------eeec
Q psy10669 124 FDFLSSG-TTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----------GV-------------------KGVT 172 (337)
Q Consensus 124 pklII~~-~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------g~-------------------~~T~ 172 (337)
|=+++++ ++.-+ -.-++.+|..||+++|.+|.||+|= +|-.. |+ +++.
T Consensus 236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAY-AGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~l 314 (511)
T KOG0628|consen 236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAY-AGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPL 314 (511)
T ss_pred cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhh-ccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecc
Confidence 7666665 22222 4446888999999999999999994 44333 21 1111
Q ss_pred -cCCchhhh-----h---HHHHHhhccCCCC-CCCCcHHHHHHHHHHH--HHHhchhhHHHHHHHHHHHHHHHHHHHh-C
Q psy10669 173 -KTGEKILY-----D---YEEKINNAVFPSL-QGGPHNHAIGAIATAM--LQAQSDEFKSYQAQVKANASHLSDEMIK-R 239 (337)
Q Consensus 173 -~~Gg~i~~-----~---l~~~i~~~~~p~~-~g~~~~~~iaala~a~--~e~~~~~~~~y~~~v~~na~~l~~~L~~-~ 239 (337)
.+-|.-+. | |...-....-++. -.=|....+=++-..+ +-+.-...++|..+-++.++.|-+.+.+ .
T Consensus 315 Wvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~ 394 (511)
T KOG0628|consen 315 WVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADP 394 (511)
T ss_pred eeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 12221110 1 1111111111221 1234445555554443 2232356678888889999988887766 5
Q ss_pred CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh----cCceeccCc-----ccchhh
Q psy10669 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE----IAIACNKNT-----GISLAA 288 (337)
Q Consensus 240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~----~gI~v~~~~-----girig~ 288 (337)
-|++. +..|+.+|-++-++ +...-+++|.+ ..|...+.. -||+..
T Consensus 395 ~FE~~---~~~~lgLvcFRlk~-~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V 448 (511)
T KOG0628|consen 395 RFEIV---NKRILGLVCFRLKG-DNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAV 448 (511)
T ss_pred cceee---cccccceeEEeecC-CcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEe
Confidence 78887 58999999998877 44444555553 245544444 677643
No 377
>KOG1405|consensus
Probab=88.91 E-value=3 Score=40.67 Aligned_cols=140 Identities=14% Similarity=0.188 Sum_probs=73.6
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccce----------------eeeecc--CCchhhh-hHHHHHhhccCCCCCCCCcH
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIAG----------------VKGVTK--TGEKILY-DYEEKINNAVFPSLQGGPHN 200 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~~--~Gg~i~~-~l~~~i~~~~~p~~~g~~~~ 200 (337)
+..|++|++++|+.++||+-|+-|=--| ++|..| .|||... +++..--..+|-.-.|-|.-
T Consensus 294 f~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGffh~~~frpn~pYrifNTWmGdP~k 373 (484)
T KOG1405|consen 294 FRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGFFHDEEFRPNEPYRIFNTWMGDPSK 373 (484)
T ss_pred HHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCccccCcccCCCchHHHhhhhcCChHH
Confidence 5679999999999999999997643221 233322 3786544 45332222344444555443
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEec-CCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVT-GGTDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
..++. ..+.++.+ +...+++..--++|.++|.+. +-.+-. .| ....+.+|+.+.. --..+-..+.-.|
T Consensus 374 ~lll~--~vv~~I~~---~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RG-rGTF~a~d~ps~~-~Rdk~i~~~~~nG 446 (484)
T KOG1405|consen 374 NLLLE--EVVQEIKR---EDLLNNVAHVGKALLKGLLELQAKYPGKINNLRG-RGTFIAWDCPSGS-IRDKLILIARLNG 446 (484)
T ss_pred HHHHH--HHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccc-cceEEEEeCCChH-HHHHHHHHHHHcC
Confidence 33332 22333322 345555555566666666652 111111 12 2335668876533 2223334444467
Q ss_pred ceeccCc--ccch
Q psy10669 276 IACNKNT--GISL 286 (337)
Q Consensus 276 I~v~~~~--giri 286 (337)
+.+..+. .||+
T Consensus 447 v~~GGCg~~siRf 459 (484)
T KOG1405|consen 447 VNLGGCGDKSIRF 459 (484)
T ss_pred ceecccccceeee
Confidence 7776555 5665
No 378
>PLN02397 aspartate transaminase
Probab=88.61 E-value=12 Score=37.07 Aligned_cols=64 Identities=16% Similarity=0.234 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 218 FKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 218 ~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
.++.++++.++-+.+.+.|.+.| +++.. ....--++++++ ...+.++|+++||.+.++. ||...
T Consensus 334 ~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~-p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~~~--Ri~~~ 401 (423)
T PLN02397 334 LKGMADRIISMRQKLYDALEARGSPGDWSHIT-KQIGMFSFTGLN-----KEQVDRMTKEYHIYMTRDG--RISMA 401 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc-CCceEEEecCCC-----HHHHHHHHHhCCEEECCCC--eEEEe
Confidence 34567788889999999999887 55432 123334555543 3466677788999997643 88653
No 379
>PTZ00376 aspartate aminotransferase; Provisional
Probab=86.51 E-value=11 Score=37.09 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCE----EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 220 SYQAQVKANASHLSDEMIKRGYH----VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 220 ~y~~~v~~na~~l~~~L~~~G~~----v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
+.++++.++-+.+.+.|.+.|+. .... ...--+++.+ +...+..++++.||.+-+. | ||...
T Consensus 318 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p-~gg~f~~~~~-----~~~~~~~L~~~~~v~v~p~-~-Ris~~ 383 (404)
T PTZ00376 318 EMSGRIQNMRQLLYDELKALGSPGDWEHIIN-QIGMFSFTGL-----TKEQVERLIEKYHIYLLDN-G-RISVA 383 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccccc-CceEEEecCC-----CHHHHHHHHHhCCEeecCC-C-eEEEe
Confidence 44567778888899999887532 2221 1122334443 2344555566679999875 2 77653
No 380
>PLN02368 alanine transaminase
Probab=86.13 E-value=3.8 Score=40.72 Aligned_cols=120 Identities=13% Similarity=0.115 Sum_probs=66.0
Q ss_pred cc-EEEEcCcc-cccccChHHHH---HHhhhcCCeEEEeccccc----c---ccc-----------------ee-eee--
Q psy10669 124 FD-FLSSGTTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G---LIA-----------------GV-KGV-- 171 (337)
Q Consensus 124 pk-lII~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G---li~-----------------g~-~~T-- 171 (337)
+| ++++++++ -+...+-+++. ++|+++|++++.|+++.- | ... .+ ..+
T Consensus 211 ~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfS 290 (407)
T PLN02368 211 VRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVS 290 (407)
T ss_pred eEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCC
Confidence 45 55666655 34777777655 678899999999997632 2 100 01 111
Q ss_pred -------ccCCchhh---h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh---------chhhHHHHHHHHHHHH
Q psy10669 172 -------TKTGEKIL---Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ---------SDEFKSYQAQVKANAS 230 (337)
Q Consensus 172 -------~~~Gg~i~---~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~---------~~~~~~y~~~v~~na~ 230 (337)
|-+-|+++ . ++.+.+..... ... +++.....++..++..-. ..+.+++.+...++.+
T Consensus 291 K~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~-~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~ 368 (407)
T PLN02368 291 KGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IAL-SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRAR 368 (407)
T ss_pred cccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccC-CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 11236654 2 45555554321 112 344455555555543110 0111345667788888
Q ss_pred HHHHHHHhC-CCEEec
Q psy10669 231 HLSDEMIKR-GYHVVT 245 (337)
Q Consensus 231 ~l~~~L~~~-G~~v~~ 245 (337)
.+.+.|.+. |+.+..
T Consensus 369 ~~~~~L~~~~g~~~~~ 384 (407)
T PLN02368 369 MMTDGFNSCKNVVCNF 384 (407)
T ss_pred HHHHHHhCCCCeEeCC
Confidence 899999984 877653
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=85.79 E-value=13 Score=40.95 Aligned_cols=76 Identities=12% Similarity=0.072 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHh-chh-hHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 202 AIGAIATAMLQAQ-SDE-FKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 202 ~iaala~a~~e~~-~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
.+.|+.+++--.. -++ .++.++++..++.+|++.|.+.|+++... .-+ -+.|.++. +..++..+-.+.||-+
T Consensus 336 aL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~~fF~--~~~v~~~~---~~~~~~~~a~~~~~n~ 410 (954)
T PRK12566 336 VLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNRHFFD--TLTLEVGG---AQAAIIESAEAARINL 410 (954)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCccc--eEEEEccC---CHHHHHHHHHHCCCee
Confidence 3444444443222 233 46888999999999999999999998753 122 23444421 2444545555568877
Q ss_pred ccCc
Q psy10669 279 NKNT 282 (337)
Q Consensus 279 ~~~~ 282 (337)
+...
T Consensus 411 r~~~ 414 (954)
T PRK12566 411 RILG 414 (954)
T ss_pred EEeC
Confidence 7543
No 382
>KOG1403|consensus
Probab=84.21 E-value=7.7 Score=37.09 Aligned_cols=75 Identities=20% Similarity=0.135 Sum_probs=51.2
Q ss_pred HHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 24 KEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 24 ~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
++..|--.|||.++----.+|+|.+|...-+.. -+..+|+. .++|.+-++...+.+=+.+ ++....
T Consensus 44 E~g~~yLDCInNVaHvghchp~VV~A~~kQmat----~~tN~RFl-----hd~lv~cA~~l~stlPeLs-----vc~F~N 109 (452)
T KOG1403|consen 44 EEGTRYLDCINNVAHVGHCHPEVVRAGAKQMAT----ISTNNRFL-----HDELVQCARTLTSTLPELS-----VCFFVN 109 (452)
T ss_pred cCcccHHHHhhhhhhcccCCHHHHHHHHHHHhH----hcccchhh-----HHHHHHHHHHHhhcCCCce-----EEEEec
Confidence 333444467888887778899999988654432 23344543 4788877776777776655 577789
Q ss_pred CCchhHHHH
Q psy10669 104 SGSPANFAV 112 (337)
Q Consensus 104 Sgt~AN~~v 112 (337)
||+.||--.
T Consensus 110 SGSEANDLA 118 (452)
T KOG1403|consen 110 SGSEANDLA 118 (452)
T ss_pred CCchhhHHH
Confidence 999999544
No 383
>PRK08637 hypothetical protein; Provisional
Probab=79.85 E-value=29 Score=33.78 Aligned_cols=63 Identities=10% Similarity=0.152 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhC----CCEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCceeccCc--ccchhh
Q psy10669 223 AQVKANASHLSDEMIKR----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNKNT--GISLAA 288 (337)
Q Consensus 223 ~~v~~na~~l~~~L~~~----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~~--girig~ 288 (337)
....++.+.+.+.|.+. ++.+... ..+-.+++.+. +.+..++...| ++.||.+.... .+||+.
T Consensus 296 ~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~l~--~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~ 365 (388)
T PRK08637 296 QILKERYEKTKEVLYDGKYDDAWQAYPF-NSGYFMCLKLK--GVDAEELRVHLLEKYGIGTIALNETDLRIAF 365 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcccccc-cceEEEEecCC--hHHHHHHHHHHhhhcceEEEeccCCceEEEe
Confidence 34455555566666554 4555431 22345566664 34566676666 56798875322 577754
No 384
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=77.50 E-value=39 Score=32.92 Aligned_cols=63 Identities=16% Similarity=0.279 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 219 KSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 219 ~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
++.+++..++-+.+.+.|.+.+ +++... ...--+++.+ +...+.+.+++.||.+.++ | ||+..
T Consensus 312 ~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p-~gg~~~w~~l-----~~~~~~~l~~~~~V~~~p~-~-ri~~~ 378 (396)
T PRK09257 312 EEMRERIKAMRQLLVEALKAKGPSRDFDFIAR-QRGMFSYSGL-----TPEQVDRLREEFGVYAVGS-G-RINVA 378 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccc-cceEEEecCC-----CHHHHHHHHHcCCEEEcCC-C-eEEEe
Confidence 4567777888888888888875 333321 1222344544 3456677778899999875 3 77653
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=73.24 E-value=81 Score=31.67 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=25.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHh--CCCEEec
Q psy10669 216 DEFKSYQAQVKANASHLSDEMIK--RGYHVVT 245 (337)
Q Consensus 216 ~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~ 245 (337)
...++.++++++.+.+|+++|++ .|+++..
T Consensus 355 ~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~ 386 (450)
T COG0403 355 QGLKEIAERIHRLAAYLAAGLKEIGAGVELVF 386 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCceEecc
Confidence 44589999999999999999995 5698875
No 386
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=64.43 E-value=9.5 Score=37.39 Aligned_cols=40 Identities=23% Similarity=0.375 Sum_probs=32.7
Q ss_pred ccEEEE--cCccccc----ccChHHHHHHhhhcCCeEEEecccccc
Q psy10669 124 FDFLSS--GTTCYSR----CLDYARFRQICDETDSIMFADMSHISG 163 (337)
Q Consensus 124 pklII~--~~S~~~~----~~d~~~l~eia~~~ga~l~vD~AH~~G 163 (337)
++++++ +-|.|+. ..|+..|..+.++++.++++|.+|+.|
T Consensus 254 ~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 254 GQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 689988 4455652 378888888888899999999999999
No 387
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=62.43 E-value=11 Score=35.14 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=32.4
Q ss_pred ccEEEEc--Cccc-c---cccChHHHHHHhhhcCCeEEEecccccc
Q psy10669 124 FDFLSSG--TTCY-S---RCLDYARFRQICDETDSIMFADMSHISG 163 (337)
Q Consensus 124 pklII~~--~S~~-~---~~~d~~~l~eia~~~ga~l~vD~AH~~G 163 (337)
++++++- -|.| + .+.|+..|..+.++++..+++|.+|+.|
T Consensus 161 ~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 161 GNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 6778774 4466 4 4788888888888889999999999988
No 388
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=62.05 E-value=11 Score=35.05 Aligned_cols=41 Identities=24% Similarity=0.294 Sum_probs=32.4
Q ss_pred ccEEEEc--Cccccc----ccChHHHHHHhhhcCCeEEEeccccccc
Q psy10669 124 FDFLSSG--TTCYSR----CLDYARFRQICDETDSIMFADMSHISGL 164 (337)
Q Consensus 124 pklII~~--~S~~~~----~~d~~~l~eia~~~ga~l~vD~AH~~Gl 164 (337)
++++++. -+.|+. ..|+..|..+.++.+..+++|.||+.|.
T Consensus 151 ~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 151 SNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 6888884 344542 6777778888888999999999999995
No 389
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=59.59 E-value=12 Score=36.55 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=34.6
Q ss_pred ccEEEEcC------cccc-cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 124 FDFLSSGT------TCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 124 pklII~~~------S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
++++++.- |.|+ ...|+..+..+.+.++.++++|.||+.|.-.
T Consensus 237 ~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~sd 286 (352)
T PRK13396 237 PNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKSE 286 (352)
T ss_pred CeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcHH
Confidence 68888853 2355 7889999999988889999999999998543
No 390
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=56.89 E-value=14 Score=34.14 Aligned_cols=44 Identities=14% Similarity=0.088 Sum_probs=35.5
Q ss_pred ccEEEEc-CcccccccChHHHH--HHhhhcCCeEEEeccccccccce
Q psy10669 124 FDFLSSG-TTCYSRCLDYARFR--QICDETDSIMFADMSHISGLIAG 167 (337)
Q Consensus 124 pklII~~-~S~~~~~~d~~~l~--eia~~~ga~l~vD~AH~~Gli~g 167 (337)
++++.|. +++|++.-=+-+++ .|-++.|+++++|+.|+.-+-+|
T Consensus 160 ~~v~lcERG~sFGYnnLV~DMrsl~iM~~~~~PViFDaTHSvQ~pgg 206 (279)
T COG2877 160 NKVILCERGASFGYNNLVVDMRSLPIMKEFGAPVIFDATHSVQQPGG 206 (279)
T ss_pred CcEEEEeccCccCcchhHHHhhhhHHHHHcCCCeEEecccceeCCCC
Confidence 8999998 78888766666666 45588999999999999877663
No 391
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=55.85 E-value=16 Score=34.11 Aligned_cols=42 Identities=12% Similarity=0.118 Sum_probs=31.4
Q ss_pred ccEEEEc-Cccccc---ccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 124 FDFLSSG-TTCYSR---CLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 124 pklII~~-~S~~~~---~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+++|+|. ++.|+. ..|+..+.-+.+ .+.++++|.+|+...-+
T Consensus 145 ~~viLcERG~tf~y~r~~~D~~~ip~~k~-~~~PVi~DpSHsvq~pg 190 (258)
T TIGR01362 145 KNILLCERGTSFGYNNLVVDMRSLPIMRE-LGCPVIFDATHSVQQPG 190 (258)
T ss_pred CcEEEEeCCCCcCCCCcccchhhhHHHHh-cCCCEEEeCCccccCCC
Confidence 7899997 445543 567777765644 48999999999977666
No 392
>PF08844 DUF1815: Domain of unknown function (DUF1815); InterPro: IPR014943 This entry is about 100 amino acids in length and is functionally uncharacterised.
Probab=51.63 E-value=73 Score=25.04 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=25.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669 216 DEFKSYQAQVKANASHLSDEMIKRGYHVVT 245 (337)
Q Consensus 216 ~~~~~y~~~v~~na~~l~~~L~~~G~~v~~ 245 (337)
..+....+.++-|-++|+..|+++|+...+
T Consensus 6 ~q~R~~V~DLVm~LqALa~~Le~rG~~AsC 35 (105)
T PF08844_consen 6 EQYRSFVQDLVMSLQALAIVLERRGYLASC 35 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCceeEE
Confidence 457788899999999999999999997553
No 393
>KOG0258|consensus
Probab=49.11 E-value=97 Score=30.91 Aligned_cols=42 Identities=7% Similarity=-0.036 Sum_probs=27.8
Q ss_pred cc-EEEEcCccc-c---cccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669 124 FD-FLSSGTTCY-S---RCLDYARFRQICDETDSIMFADMSHISGLI 165 (337)
Q Consensus 124 pk-lII~~~S~~-~---~~~d~~~l~eia~~~ga~l~vD~AH~~Gli 165 (337)
|+ ++|+++.+= + ..-.+++|-.+|.+.|.+|+.|+---=-+.
T Consensus 216 ~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 216 PRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVY 262 (475)
T ss_pred ceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhcc
Confidence 65 666776662 2 334455666788999999999986443333
No 394
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=47.94 E-value=20 Score=33.56 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=30.2
Q ss_pred ccEEEEc-----Ccccc-cccChHHHHHHhhhcCCeEEEecccccc
Q psy10669 124 FDFLSSG-----TTCYS-RCLDYARFRQICDETDSIMFADMSHISG 163 (337)
Q Consensus 124 pklII~~-----~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~G 163 (337)
++++++- .+.|+ ...|++.+..+.+..+..+++|.+|+.|
T Consensus 163 ~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 163 ENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 6777764 23454 5567777777777789999999999998
No 395
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=43.99 E-value=20 Score=33.30 Aligned_cols=29 Identities=14% Similarity=-0.028 Sum_probs=25.2
Q ss_pred ccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLI 165 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli 165 (337)
.+|...|.+.++++++-++||++|-..-.
T Consensus 52 lg~~~~l~~~l~~~~i~~vIDATHPfA~~ 80 (249)
T PF02571_consen 52 LGDEEGLAEFLRENGIDAVIDATHPFAAE 80 (249)
T ss_pred CCCHHHHHHHHHhCCCcEEEECCCchHHH
Confidence 55999999999999999999999975443
No 396
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=40.66 E-value=35 Score=32.30 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=29.5
Q ss_pred ccEEEEc-Ccccccc---cChHHHHHHhhhcCCeEEEeccccccc
Q psy10669 124 FDFLSSG-TTCYSRC---LDYARFRQICDETDSIMFADMSHISGL 164 (337)
Q Consensus 124 pklII~~-~S~~~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gl 164 (337)
+++++|. +..|+.. .|+..+.-+. +.+.++++|.+|+.-+
T Consensus 159 ~~viLcERG~tFgy~~lv~D~r~ip~mk-~~~lPVI~DpSHsvQ~ 202 (290)
T PLN03033 159 PNVMVCERGTMFGYNDLIVDPRNLEWMR-EANCPVVADITHSLQQ 202 (290)
T ss_pred CcEEEEeCCCCcCCCCcccchhhhHHHH-hcCCCEEEeCCccccC
Confidence 7899997 4555433 6777766554 6799999999998533
No 397
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=38.68 E-value=44 Score=31.56 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=31.5
Q ss_pred ccEEEEc-Ccccc---cccChHHHHHHhhh-cCCeEEEeccccccccc
Q psy10669 124 FDFLSSG-TTCYS---RCLDYARFRQICDE-TDSIMFADMSHISGLIA 166 (337)
Q Consensus 124 pklII~~-~S~~~---~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~ 166 (337)
+++|+|. ++.|+ ...|+..+..+.+. -+.++++|.+|+..+-+
T Consensus 159 ~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHsvq~p~ 206 (281)
T PRK12457 159 DRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHSLQCRD 206 (281)
T ss_pred CeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCccccCCC
Confidence 7999997 44433 45677777666554 39999999999977665
No 398
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=37.54 E-value=2e+02 Score=25.21 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=47.2
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE 94 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~ 94 (337)
+.-+.+.|.|++.+|..++-+...-...+..-.|...+|..-+.++++....-.++.+.+|.+++
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~g~~~~p~~~~~~~~~i~~~~l~~lg~~~~ 176 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMPAFYTRPKSVEDMIDFIVGRVLDQLGIEND 176 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCCcccCCCCCHHHHHHHHHHHHHHHcCCCcc
Confidence 46788999999999999997764322223334677788888888876655545688899998763
No 399
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=36.47 E-value=44 Score=31.33 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=30.0
Q ss_pred ccEEEEc-Ccccccc---cChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 124 FDFLSSG-TTCYSRC---LDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 124 pklII~~-~S~~~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
+++|+|. ++.|+.. .|+..+.-+ ++.+.++++|.+|+..+-+
T Consensus 153 ~~vilcERG~tf~y~r~~~D~~~vp~~-k~~~lPVi~DpSHsvq~pg 198 (264)
T PRK05198 153 DKIILCERGTSFGYNNLVVDMRGLPIM-RETGAPVIFDATHSVQLPG 198 (264)
T ss_pred CeEEEEeCCCCcCCCCeeechhhhHHH-hhCCCCEEEeCCccccCCC
Confidence 7899997 4555433 566666544 4567999999999976655
No 400
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=36.20 E-value=30 Score=32.04 Aligned_cols=29 Identities=10% Similarity=-0.056 Sum_probs=25.0
Q ss_pred ccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLI 165 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli 165 (337)
.+|.+.|.+.++++++-++||++|-....
T Consensus 51 l~~~~~l~~~l~~~~i~~VIDATHPfA~~ 79 (248)
T PRK08057 51 FGGAEGLAAYLREEGIDLVIDATHPYAAQ 79 (248)
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCccHHH
Confidence 45889999999999999999999976443
No 401
>PRK05920 aromatic acid decarboxylase; Validated
Probab=34.31 E-value=2.4e+02 Score=25.28 Aligned_cols=66 Identities=20% Similarity=0.127 Sum_probs=49.7
Q ss_pred cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669 29 QINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE 94 (337)
Q Consensus 29 q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~ 94 (337)
-+.-+.+.+++++.+|..++.+.......+..-.|...+|.+-...+++......++.+.+|.+++
T Consensus 129 ~~~pvvi~P~~m~~~~~~~~nl~~L~~~G~~ii~P~~g~y~~p~~~~~~~~f~~~~~l~~lg~~~~ 194 (204)
T PRK05920 129 ERRKLILVPRETPLSLIHLENMLKLAEAGAIILPAIPAFYHKPQTIDDLVDFVVARILDLLGIDLD 194 (204)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEeCCcccccCCCCCHHHHHHHHHHHHHHhcCCCCc
Confidence 356788999999999999998875422223344688888888878777666666788999998874
No 402
>KOG0634|consensus
Probab=33.32 E-value=2.2e+02 Score=28.81 Aligned_cols=66 Identities=15% Similarity=0.240 Sum_probs=45.4
Q ss_pred CCCCCcceeecCCC-chhHHHHHHhhCCc---------------------------------------------------
Q psy10669 92 DPEQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------------------------- 119 (337)
Q Consensus 92 ~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------------- 119 (337)
.+..| ++..++| |++..-++..++++
T Consensus 121 ~~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~ 198 (472)
T KOG0634|consen 121 PYKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGS 198 (472)
T ss_pred CCCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCccc
Confidence 34567 7888888 68888888888654
Q ss_pred -ccccccEEEEcCcc-c--ccccChH---HHHHHhhhcCCeEEEecc
Q psy10669 120 -NNARFDFLSSGTTC-Y--SRCLDYA---RFRQICDETDSIMFADMS 159 (337)
Q Consensus 120 -~~a~pklII~~~S~-~--~~~~d~~---~l~eia~~~ga~l~vD~A 159 (337)
+..+|+++.+=++- + ++-...+ +|.+||++|+.+++-|+=
T Consensus 199 ~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 199 YKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred ccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 11137887774332 2 3444444 477999999999999975
No 403
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.56 E-value=80 Score=29.98 Aligned_cols=29 Identities=17% Similarity=0.293 Sum_probs=20.9
Q ss_pred cccEEEEcCcc--cccccChHHHHHHhhhcC
Q psy10669 123 RFDFLSSGTTC--YSRCLDYARFRQICDETD 151 (337)
Q Consensus 123 ~pklII~~~S~--~~~~~d~~~l~eia~~~g 151 (337)
+|||++.|+|. |+-..-+..+.++....+
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vd 138 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVD 138 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcc
Confidence 49999999887 556666666777776643
No 404
>KOG2790|consensus
Probab=31.51 E-value=4.8e+02 Score=25.12 Aligned_cols=202 Identities=18% Similarity=0.161 Sum_probs=108.8
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCC----CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGL----PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG- 105 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~----~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg- 105 (337)
+-+|.-|.---+|..|.+-++.++.|--+.|- ...|.-..+. |...+...+.+|++.++. +.|.|.-|
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~k----ii~~tes~lreLlniPdn---~~vlf~QGG 79 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAK----IINDTESLLRELLNIPDN---YKVLFLQGG 79 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHH----HHHHHHHHHHHHHcCCCc---eeEEEEeCC
Confidence 45666666777899999988888776433332 2334333333 334445677788898874 35666333
Q ss_pred -c---hh---HHHHHHhhCCc-----------------ccc-c---ccEEEEcCccc--ccccChHHHH-----------
Q psy10669 106 -S---PA---NFAVCEKALPT-----------------NNA-R---FDFLSSGTTCY--SRCLDYARFR----------- 144 (337)
Q Consensus 106 -t---~A---N~~v~~aLl~~-----------------~~a-~---pklII~~~S~~--~~~~d~~~l~----------- 144 (337)
| .| |+. ++ +. +.| | |..|+.....| +..-|.....
T Consensus 80 Gt~qFaAv~lNL~---gl-K~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~yvyyC 155 (370)
T KOG2790|consen 80 GTGQFAAVPLNLI---GL-KHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDASYVYYC 155 (370)
T ss_pred Ccccccccchhhh---cc-ccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCCCccEEEEe
Confidence 3 22 322 21 11 112 1 55555443332 2333322211
Q ss_pred -----------HHh--hhcCCeEEEeccccccccc--------eeeeecc------CC--chhhh-hHHH---HHhhccC
Q psy10669 145 -----------QIC--DETDSIMFADMSHISGLIA--------GVKGVTK------TG--EKILY-DYEE---KINNAVF 191 (337)
Q Consensus 145 -----------eia--~~~ga~l~vD~AH~~Gli~--------g~~~T~~------~G--g~i~~-~l~~---~i~~~~~ 191 (337)
++. +-.|++|+.|+| +-++. |+.+.+. .| .+|+. |+.. .+.+.++
T Consensus 156 aNETVHGVEf~~~P~~~~~~~vlVaDmS--SnflSrpvDvsk~gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~tP~v~ 233 (370)
T KOG2790|consen 156 ANETVHGVEFDFIPVNDPKGAVLVADMS--SNFLSRPVDVSKFGVIFAGAQKNVGPAGVTVVIVRKDLLGNALDITPSVL 233 (370)
T ss_pred cCceeeceecCCCCCCCCCCceEEEecc--cchhcCCccchhcceEEeccccccCccccEEEEEehhhhcccccCCcccc
Confidence 122 345888999988 44444 3444432 22 12222 3322 1222222
Q ss_pred C--------CCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCEEec
Q psy10669 192 P--------SLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYHVVT 245 (337)
Q Consensus 192 p--------~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~v~~ 245 (337)
. .++-||..-+|-.....++++++..+ .+..+.-.+-++.|.+.+.+. ||-...
T Consensus 234 dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cp 297 (370)
T KOG2790|consen 234 DYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCP 297 (370)
T ss_pred ceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcc
Confidence 1 12356777777777888999987555 455556667888999999884 776544
No 405
>PF06733 DEAD_2: DEAD_2; InterPro: IPR010614 This represents a conserved region within a number of RAD3-like DNA-binding helicases that are seemingly ubiquitous - members include proteins of eukaryotic, bacterial and archaeal origin. RAD3 is involved in nucleotide excision repair, and forms part of the transcription factor TFIIH in yeast [].; GO: 0003677 DNA binding, 0004003 ATP-dependent DNA helicase activity, 0005524 ATP binding; PDB: 3CRV_A 3CRW_1 2VL7_A 4A15_A 2VSF_A.
Probab=29.19 E-value=23 Score=30.45 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=21.6
Q ss_pred ccEEEEcCcccccccChHHHHHH--hhhcCCeEEEeccccccc
Q psy10669 124 FDFLSSGTTCYSRCLDYARFRQI--CDETDSIMFADMSHISGL 164 (337)
Q Consensus 124 pklII~~~S~~~~~~d~~~l~ei--a~~~ga~l~vD~AH~~Gl 164 (337)
-++||+..+ | ..|-.-...+ .+..+.+||+|+||-..=
T Consensus 120 adivi~~y~-y--l~~~~~~~~~~~~~~~~~ivI~DEAHNL~~ 159 (174)
T PF06733_consen 120 ADIVICNYN-Y--LFDPSIRKSLFGIDLKDNIVIFDEAHNLED 159 (174)
T ss_dssp -SEEEEETH-H--HHSHHHHHHHCT--CCCEEEEETTGGGCGG
T ss_pred CCEEEeCHH-H--HhhHHHHhhhccccccCcEEEEecccchHH
Confidence 578988753 3 3332222222 234578999999997643
No 406
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=28.81 E-value=2.6e+02 Score=24.24 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=48.3
Q ss_pred CccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCccccc--ccEEEEcC-cccccccCh---HH
Q psy10669 69 GGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNAR--FDFLSSGT-TCYSRCLDY---AR 142 (337)
Q Consensus 69 ~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~~~a~--pklII~~~-S~~~~~~d~---~~ 142 (337)
.|-++-++.-.++.+|++++ |..+ .-|-.+||+.|..+. ++.. -++|++++ .-|-..+.+ ++
T Consensus 7 pG~eNT~~tle~a~erA~el-gik~----~vVAS~tG~tA~k~l-------emveg~lkvVvVthh~Gf~e~g~~e~~~E 74 (186)
T COG1751 7 PGKENTDETLEIAVERAKEL-GIKH----IVVASSTGYTALKAL-------EMVEGDLKVVVVTHHAGFEEKGTQEMDEE 74 (186)
T ss_pred CcccchHHHHHHHHHHHHhc-Ccce----EEEEecccHHHHHHH-------HhcccCceEEEEEeecccccCCceecCHH
Confidence 45566776555677898876 6665 457778898887765 3332 46788873 334333322 24
Q ss_pred HHHHhhhcCCeEEEecccc
Q psy10669 143 FRQICDETDSIMFADMSHI 161 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~ 161 (337)
+++.-++.|+.++ -.||.
T Consensus 75 ~~~~L~erGa~v~-~~sHa 92 (186)
T COG1751 75 VRKELKERGAKVL-TQSHA 92 (186)
T ss_pred HHHHHHHcCceee-eehhh
Confidence 6666677777654 34554
No 407
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=28.07 E-value=50 Score=30.79 Aligned_cols=27 Identities=15% Similarity=0.126 Sum_probs=24.6
Q ss_pred ccChHHHHHHhhhcCCeEEEecccccc
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISG 163 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~G 163 (337)
.++.+.|++.-++.++-++||++|-..
T Consensus 52 ~l~~e~l~~~l~e~~i~llIDATHPyA 78 (257)
T COG2099 52 FLGAEGLAAFLREEGIDLLIDATHPYA 78 (257)
T ss_pred cCCHHHHHHHHHHcCCCEEEECCChHH
Confidence 688999999999999999999999653
No 408
>PF00793 DAHP_synth_1: DAHP synthetase I family; InterPro: IPR006218 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family catalyse the first step in aromatic amino acid biosynthesis from chorismate. Class I includes bacterial and yeast enzymes; class II includes higher plants and various microorganisms (see IPR002480 from INTERPRO) []. The first step in the common pathway leading to the biosynthesis of aromatic compounds is the stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). This reaction is catalyzed by DAHP synthase, a metal-activated enzyme, which in microorganisms is the target for negative-feedback regulation by pathway intermediates or by end products. In Escherichia coli there are three DAHP synthetase isoforms, each specifically inhibited by one of the three aromatic amino acids. The crystal structure of the phenylalanine-regulated form of DAHP synthetase shows the fold as is a (beta/alpha)8 barrel with several additional beta strands and alpha helices []. ; GO: 0009058 biosynthetic process; PDB: 3FS2_B 3STF_B 3FYP_D 3QQ1_A 3QPZ_C 3FYO_D 3STC_A 2QKF_D 3STE_C 3QQ0_A ....
Probab=26.54 E-value=48 Score=31.15 Aligned_cols=31 Identities=23% Similarity=0.175 Sum_probs=25.5
Q ss_pred cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 136 RCLDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 136 ~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
...|+..+..+.++.+..+|+|.+|+.|.-.
T Consensus 179 ~~~di~~~~~~~~~~~lpVivD~SH~~~~~~ 209 (270)
T PF00793_consen 179 NVLDIAAVPIMKKKTHLPVIVDPSHANSRKD 209 (270)
T ss_dssp EEHHTTHHHHHHHHTSSEEEEEHHHHTTTCG
T ss_pred cchhHHHHHHHHHhcCCCEEECchhhhcccc
Confidence 5567777888878888999999999998754
No 409
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=24.76 E-value=1.2e+02 Score=29.67 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=26.4
Q ss_pred EEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccch-hhhhHh
Q psy10669 252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISL-AAEIQA 292 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------giri-g~~~~t 292 (337)
++++|+....-.-..+.+.|++.||.+|+-. |||| +|-.+|
T Consensus 145 iiVld~~~~~~~~~~i~~ELe~~GIrlnk~~p~V~I~kk~~gGI~i~~t~~l~ 197 (365)
T COG1163 145 IIVLDVFEDPHHRDIIERELEDVGIRLNKRPPDVTIKKKESGGIRINGTGPLT 197 (365)
T ss_pred EEEEecCCChhHHHHHHHHHHhcCeEecCCCCceEEEEeccCCEEEecccccc
Confidence 4444544332113467788899999999766 9999 544444
No 410
>PRK02308 uvsE putative UV damage endonuclease; Provisional
Probab=24.67 E-value=2.3e+02 Score=27.03 Aligned_cols=80 Identities=14% Similarity=0.179 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch------hHHHHHHhhCC-cccccccEEEEcCcccccccChHHHHHHh
Q psy10669 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP------ANFAVCEKALP-TNNARFDFLSSGTTCYSRCLDYARFRQIC 147 (337)
Q Consensus 75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~------AN~~v~~aLl~-~~~a~pklII~~~S~~~~~~d~~~l~eia 147 (337)
..|+..+ +.++..|++.. .-|.++.|+. |.--+..++-. ++..+.++++=+. ...+.++++.+||
T Consensus 130 ~~L~~~~--~~~~~lG~~~~---~~vViHpG~~~~~ke~al~r~~~~l~~l~~~~~~~L~LEN~---~~~~t~~ell~I~ 201 (303)
T PRK02308 130 KDLEYHA--KLLDLMGIDDS---SKINIHVGGAYGDKEKALERFIENIKKLPESIKKRLTLEND---DKTYTVEELLYIC 201 (303)
T ss_pred HHHHHHH--HHHHHCCCCCC---CEEEECCCccCCCHHHHHHHHHHHHHHhhHHhCCEEEEeeC---CCCCCHHHHHHHH
Confidence 4455444 56788898842 2377777752 11111111100 0111234433322 1238899999999
Q ss_pred hhcCCeEEEeccccc
Q psy10669 148 DETDSIMFADMSHIS 162 (337)
Q Consensus 148 ~~~ga~l~vD~AH~~ 162 (337)
++.+..+++|..|..
T Consensus 202 e~~~ipv~~D~hH~~ 216 (303)
T PRK02308 202 EKLGIPVVFDYHHHM 216 (303)
T ss_pred HHcCCCEEEeHHhhh
Confidence 999999999988854
No 411
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=24.11 E-value=59 Score=30.57 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=33.5
Q ss_pred ccEEEEcCcc--c----ccccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669 124 FDFLSSGTTC--Y----SRCLDYARFRQICDETDSIMFADMSHISGLI 165 (337)
Q Consensus 124 pklII~~~S~--~----~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli 165 (337)
|.+|.|.-.. | ..-.|+..+.-+.+....++|||.||.+|=-
T Consensus 181 ~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVivDpSH~~Grr 228 (286)
T COG2876 181 GNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVIVDPSHATGRR 228 (286)
T ss_pred CcEEEEecccccccccccceechHHHHHHHhhcCCCEEECCCCcccch
Confidence 8899886444 2 3677888888888888999999999999843
No 412
>KOG3974|consensus
Probab=23.87 E-value=1.8e+02 Score=27.52 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=50.2
Q ss_pred CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------ccc---------cc
Q psy10669 63 PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------NNA---------RF 124 (337)
Q Consensus 63 ~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------~~a---------~p 124 (337)
.|.+.|+|+.+...+- +-++|++- ..|. +-+.|-. ++++..++ +.+ |-
T Consensus 37 GGc~eYTGAPYFaa~s-------a~~~GaDL----~HiF--Ce~~Aa~-vIKsYsPdLIVHP~l~~~~av~~i~k~L~Rl 102 (306)
T KOG3974|consen 37 GGCLEYTGAPYFAAIS-------ALRVGADL----SHIF--CEPEAAV-VIKSYSPDLIVHPVLDQENAVDIIEKLLQRL 102 (306)
T ss_pred cccccccCccHHHHHH-------HHHhccce----eeee--echhHHH-HHhhcCCceeecccccCCchHhHHHHHHhhe
Confidence 4678888887776554 56789885 2344 3344433 35777664 111 12
Q ss_pred cEEEEcCcccccccC----hHHHHHHhhhcCCeEEEecc
Q psy10669 125 DFLSSGTTCYSRCLD----YARFRQICDETDSIMFADMS 159 (337)
Q Consensus 125 klII~~~S~~~~~~d----~~~l~eia~~~ga~l~vD~A 159 (337)
..||+|+ -.+++-- ++++-+.+++.+.++++|+=
T Consensus 103 havVIGP-GLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 103 HAVVIGP-GLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred eEEEECC-CCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 5788885 4455332 23344667788999999975
No 413
>TIGR00034 aroFGH phospho-2-dehydro-3-deoxyheptonate aldolase.
Probab=23.34 E-value=57 Score=31.80 Aligned_cols=40 Identities=20% Similarity=0.050 Sum_probs=26.1
Q ss_pred ccEEEEc-Cc---ccccccChHHHHHHhhhcCCe--EEEeccccccc
Q psy10669 124 FDFLSSG-TT---CYSRCLDYARFRQICDETDSI--MFADMSHISGL 164 (337)
Q Consensus 124 pklII~~-~S---~~~~~~d~~~l~eia~~~ga~--l~vD~AH~~Gl 164 (337)
|..+++- +. +|.+ .|+..+.++-++.+.. +|||.||..|-
T Consensus 222 ~~~hlilRGg~~pNy~~-~di~~~~~~l~~~~lp~~vmVD~SH~ns~ 267 (344)
T TIGR00034 222 PDGHIILRGGKKPNYSA-ADVAAAKKQLEKAGLPPHLMIDFSHGNSN 267 (344)
T ss_pred CCEEEEecCCCCCCCCH-HHHHHHHHHHHHcCCCCeEEEeCCCcccc
Confidence 6655553 22 3333 4666666666777888 99999997654
No 414
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=22.90 E-value=1e+02 Score=30.00 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=31.9
Q ss_pred ccEEEEc--Cccc-c---cccChHHHHHHhhhcCCeEEEeccccccc
Q psy10669 124 FDFLSSG--TTCY-S---RCLDYARFRQICDETDSIMFADMSHISGL 164 (337)
Q Consensus 124 pklII~~--~S~~-~---~~~d~~~l~eia~~~ga~l~vD~AH~~Gl 164 (337)
++++++. -+.| + ...|+..+..+.+..+..+++|.+|+.|.
T Consensus 229 ~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G~ 275 (335)
T PRK08673 229 PNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATGK 275 (335)
T ss_pred CeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCcc
Confidence 6788875 3355 2 56777777788877899999999999986
No 415
>COG5319 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.52 E-value=2.2e+02 Score=23.76 Aligned_cols=66 Identities=14% Similarity=0.208 Sum_probs=42.5
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 208 TAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 208 ~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.+-++++ ..+++..++|.+|+.+..+++.+.-=++..|.++..-+ .+. . +..++-.++++ ||.+-+
T Consensus 68 ~a~ke~~-a~~~~~~r~vreNad~VGekFaeEARkiHygea~eRGI---~Ge-a-S~eEa~aL~Ed-Gvei~P 133 (142)
T COG5319 68 EAQKEAL-AKMREAVRHVRENADYVGEKFAEEARKIHYGEADERGI---YGE-A-SHEEAKALAED-GVEIAP 133 (142)
T ss_pred HHHHHHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHhhccCCccccc---cCc-C-CHHHHHHHHHc-Cceecc
Confidence 3445554 36678899999999999999988544455555665532 122 1 45566555555 887654
No 416
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=21.94 E-value=2.8e+02 Score=24.46 Aligned_cols=64 Identities=17% Similarity=0.176 Sum_probs=50.2
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhc-cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNK-YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE 94 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~-y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~ 94 (337)
+.-+.+.|.|.+.+|.+++-+.. +.+. +..=.|..++|.+-+.+++++...--++.+.+|.++.
T Consensus 115 ~~pvii~P~~M~~~p~~~~Nl~~-L~~~G~~vi~P~~g~~a~p~~~~~~~~~~v~~~~~~l~~~~~ 179 (185)
T PRK06029 115 RRRLVLCVRETPLHLGHLRNMTK-LAEMGAIIMPPVPAFYHRPQTLEDMVDQTVGRVLDLFGIEHD 179 (185)
T ss_pred CCCEEEEeccccCCHHHHHHHHH-HHHCcCEEECCCcccccCCCCHHHHHHHHHHHHHHhcCCCCc
Confidence 45688899999999999999975 3432 2223577888999899988887777899999998874
No 417
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=21.14 E-value=1.1e+02 Score=29.51 Aligned_cols=36 Identities=17% Similarity=0.100 Sum_probs=26.3
Q ss_pred ccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEecc
Q psy10669 124 FDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMS 159 (337)
Q Consensus 124 pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~A 159 (337)
-.++|+.+|.=+ -.-.|+++-++|++.|+.+++|.+
T Consensus 130 ~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 130 DDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 466777655532 223467888999999999999998
No 418
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=21.10 E-value=2.6e+02 Score=28.67 Aligned_cols=63 Identities=14% Similarity=0.057 Sum_probs=36.2
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcC-CCCCCCcceeecCCCchhHHHHHHhh
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFN-LDPEQWGCNVQPYSGSPANFAVCEKA 116 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg-~~~~~~~~~v~~~Sgt~AN~~v~~aL 116 (337)
+|.|.+|+...+. ++...+ .++.++ +...+++ +++.++|. .+.. ....++||+.||.+++...
T Consensus 107 hp~v~~Av~~ql~-~~~~~~---~~~~~~~~~~~~la----e~L~~~~~~~~~~---~v~f~~SGsEA~e~AlKlA 171 (504)
T PLN02760 107 EPRLVAAATEQLN-KLPFYH---SFWNRTTKPSLDLA----KELLEMFTARKMG---KVFFTNSGSEANDTQVKLV 171 (504)
T ss_pred CHHHHHHHHHHHh-hcccee---cccccCcHHHHHHH----HHHHhhcCCCCCC---EEEEeCChHHHHHHHHHHH
Confidence 9999999987654 433221 122222 2223333 46667753 3321 1344589999999888865
No 419
>PF15643 Tox-PL-2: Papain fold toxin 2
Probab=20.69 E-value=1.8e+02 Score=23.19 Aligned_cols=73 Identities=18% Similarity=0.085 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh-hcCceeccCc-ccchhhhh---HhhhCCCH
Q psy10669 224 QVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE-EIAIACNKNT-GISLAAEI---QAISGPKL 298 (337)
Q Consensus 224 ~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~-~~gI~v~~~~-girig~~~---~t~~G~~~ 298 (337)
|..+-|+++.+.|.+.|++= -++-+..+... .....+++|. +..|..|... ||+++.-. +..-|++.
T Consensus 20 qC~~cA~Al~~~L~~~gI~G-------k~i~l~T~~~~-~~~I~sd~~~~~~sIt~NG~H~gI~V~~~VFDNl~p~G~~r 91 (100)
T PF15643_consen 20 QCVECASALKQFLKQAGIPG-------KIIRLYTGYHE-GPFIYSDRLGPQESITTNGRHYGIEVGEIVFDNLHPEGMSR 91 (100)
T ss_pred ehHHHHHHHHHHHHHCCCCc-------eEEEEEecCCC-CceehhhhhcCCcceeeCCEEEEEEEeeEEecccCcccCCH
Confidence 56788999999999988631 23444443222 2335667773 2477777766 88887432 44568888
Q ss_pred HHHHHH
Q psy10669 299 VDFQTC 304 (337)
Q Consensus 299 ~~~~~~ 304 (337)
.||+..
T Consensus 92 ~dWl~~ 97 (100)
T PF15643_consen 92 EDWLRD 97 (100)
T ss_pred HHHHHh
Confidence 887754
No 420
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=20.57 E-value=2.6e+02 Score=23.72 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCCEEecCC--------------CCCeEEEEEecCCCc--chHHHHHHHhhcCce
Q psy10669 229 ASHLSDEMIKRGYHVVTGG--------------TDVHLILIDLRKNKL--TGSKVELVLEEIAIA 277 (337)
Q Consensus 229 a~~l~~~L~~~G~~v~~~~--------------t~~h~v~V~~~~~~~--~~~~~~~~L~~~gI~ 277 (337)
++.++..|.+.||+|...+ .+.|.+.|+.-..+. ....+-+.|.++|.-
T Consensus 29 akvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~dv~vIgvSsl~g~h~~l~~~lve~lre~G~~ 93 (143)
T COG2185 29 AKVIARALADAGFEVINLGLFQTPEEAVRAAVEEDVDVIGVSSLDGGHLTLVPGLVEALREAGVE 93 (143)
T ss_pred hHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhcCCCEEEEEeccchHHHHHHHHHHHHHHhCCc
Confidence 4456677889999998733 567777666433221 334555666666543
No 421
>PF03851 UvdE: UV-endonuclease UvdE; InterPro: IPR004601 Schizosaccharomyces pombe ultraviolet damage endonuclease (UVDE or Uve1p) performs the initial step in an alternative excision repair pathway for UV-induced DNA damage. This DNA repair pathway was originally thought to be specific for UV damage, however Uve1p also recognises UV-induced bipyrimidine photoadducts and other non-UV-induced DNA adducts []. The Deinococcus radiodurans UVSE protein has also shown to be a UV DNA damage endonuclease that catalyzes repair of UV-induced DNA damage by a similar mechanism [].; GO: 0004519 endonuclease activity, 0006289 nucleotide-excision repair, 0009411 response to UV; PDB: 3BZG_A 3BZJ_A 3C0L_A 3C0S_A 3C0Q_A.
Probab=20.03 E-value=1.9e+02 Score=27.35 Aligned_cols=81 Identities=21% Similarity=0.237 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcceeecCCC--chhHHHHHHhh------CCcccccccEEEEcCcccccccChHHHHHH
Q psy10669 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG--SPANFAVCEKA------LPTNNARFDFLSSGTTCYSRCLDYARFRQI 146 (337)
Q Consensus 75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg--t~AN~~v~~aL------l~~~~a~pklII~~~S~~~~~~d~~~l~ei 146 (337)
.+||..+ ++.++.|.++..| .-+..+-| |.-=-+.+.-+ ++ +..+.+|++=.. -....++++-.|
T Consensus 126 ~~L~yH~--~~Ld~mg~~~~~~-~~i~IH~GG~YgdK~~al~RF~~~~~~L~-~~ir~rL~lEND---d~~yt~~d~L~i 198 (275)
T PF03851_consen 126 RDLEYHA--RLLDLMGLDDSPD-HKINIHVGGVYGDKEAALERFIENFKRLP-ESIRKRLTLEND---DKTYTVEDVLPI 198 (275)
T ss_dssp HHHHHHH--HHHHHTT-TT-----EEEEE----SS-HHHHHHHHHHHHHT---HHHHTTEEEE-----SSS--HHHHHHH
T ss_pred HHHHHHH--HHHHHcCCCcccc-cEEEEeeCCCCCChHHHHHHHHHHHhhCC-HhhhhcEEEecC---CCccCHHHHHHH
Confidence 4566544 7789999887544 23444444 32111111111 22 212356776553 133568888899
Q ss_pred hhhcCCeEEEeccccc
Q psy10669 147 CDETDSIMFADMSHIS 162 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~ 162 (337)
|++.|+++++|.=|-.
T Consensus 199 c~~~giP~VfD~hHh~ 214 (275)
T PF03851_consen 199 CEKLGIPMVFDYHHHR 214 (275)
T ss_dssp HHHHT--EEEEHHHHH
T ss_pred HHHhCCCEEEEhHHhh
Confidence 9999999999998743
Done!