Query psy10669
Match_columns 337
No_of_seqs 198 out of 1507
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 15:33:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10669.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10669hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 3.7E-91 1.2E-95 682.2 28.8 333 4-336 27-489 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 1.3E-59 4.6E-64 471.7 28.2 329 9-337 33-490 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 6.5E-49 2.2E-53 393.1 29.5 335 3-337 17-483 (483)
4 3h7f_A Serine hydroxymethyltra 100.0 7.3E-40 2.5E-44 323.7 26.1 325 6-335 21-440 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 6.3E-36 2.1E-40 289.7 30.7 320 10-333 5-413 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 7.4E-35 2.5E-39 282.1 28.5 327 3-333 1-420 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 9.3E-33 3.2E-37 267.7 27.1 325 4-332 6-425 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 4.9E-28 1.7E-32 233.3 28.9 314 9-326 2-404 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 1.9E-26 6.5E-31 222.3 28.8 313 12-332 5-407 (407)
10 2w8t_A SPT, serine palmitoyltr 99.8 3.7E-17 1.3E-21 159.7 19.3 235 34-281 67-376 (427)
11 3kki_A CAI-1 autoinducer synth 99.7 1.3E-16 4.6E-21 154.3 17.9 232 33-280 61-364 (409)
12 3tqx_A 2-amino-3-ketobutyrate 99.7 5.9E-16 2E-20 148.2 21.0 234 33-280 45-356 (399)
13 3hvy_A Cystathionine beta-lyas 99.7 9.2E-17 3.1E-21 158.3 13.6 238 13-273 15-354 (427)
14 1fc4_A 2-amino-3-ketobutyrate 99.7 4.2E-15 1.4E-19 142.9 18.7 234 33-281 47-358 (401)
15 1bs0_A Protein (8-amino-7-oxon 99.6 1.6E-14 5.4E-19 138.0 19.0 236 32-280 41-347 (384)
16 3i16_A Aluminum resistance pro 99.6 3.2E-15 1.1E-19 147.3 13.4 244 13-274 17-355 (427)
17 1t3i_A Probable cysteine desul 99.6 2.9E-13 1E-17 130.0 26.1 242 32-281 29-369 (420)
18 1kmj_A Selenocysteine lyase; p 99.6 1.7E-13 5.8E-18 130.9 23.7 241 32-280 24-360 (406)
19 3m5u_A Phosphoserine aminotran 99.6 1.3E-13 4.5E-18 132.8 22.5 245 31-288 5-337 (361)
20 4hvk_A Probable cysteine desul 99.6 4.7E-14 1.6E-18 133.3 18.7 231 37-280 7-317 (382)
21 3ffr_A Phosphoserine aminotran 99.6 2.7E-13 9.2E-18 127.5 23.7 246 31-288 4-341 (362)
22 2bwn_A 5-aminolevulinate synth 99.6 6.1E-14 2.1E-18 134.9 19.0 232 35-280 50-360 (401)
23 1iug_A Putative aspartate amin 99.6 5.7E-13 1.9E-17 125.0 24.0 239 33-289 3-326 (352)
24 3e77_A Phosphoserine aminotran 99.6 5.3E-14 1.8E-18 136.4 17.0 240 36-288 18-352 (377)
25 3zrp_A Serine-pyruvate aminotr 99.6 2.1E-13 7.3E-18 129.3 20.9 240 32-288 3-340 (384)
26 3a2b_A Serine palmitoyltransfe 99.6 2E-13 7E-18 131.1 20.9 234 33-281 46-353 (398)
27 3f0h_A Aminotransferase; RER07 99.6 6.3E-13 2.2E-17 126.2 24.0 250 24-289 12-352 (376)
28 3jzl_A Putative cystathionine 99.6 2.4E-14 8.4E-19 140.2 13.8 244 17-280 7-347 (409)
29 3nnk_A Ureidoglycine-glyoxylat 99.6 8E-13 2.7E-17 126.8 23.9 242 31-288 13-366 (411)
30 2huf_A Alanine glyoxylate amin 99.6 8.1E-13 2.8E-17 126.2 23.8 244 29-288 17-359 (393)
31 3hdo_A Histidinol-phosphate am 99.5 2.8E-12 9.6E-17 121.6 26.0 233 31-287 27-334 (360)
32 3hbx_A GAD 1, glutamate decarb 99.5 8.3E-13 2.9E-17 132.2 23.2 266 17-289 41-422 (502)
33 2dr1_A PH1308 protein, 386AA l 99.5 1.9E-12 6.6E-17 122.9 24.5 243 31-289 20-357 (386)
34 3isl_A Purine catabolism prote 99.5 2.5E-12 8.5E-17 123.5 24.9 242 31-288 11-366 (416)
35 3mc6_A Sphingosine-1-phosphate 99.5 1.8E-13 6.3E-18 135.9 17.4 239 43-289 77-416 (497)
36 1m32_A 2-aminoethylphosphonate 99.5 7E-13 2.4E-17 124.7 20.5 243 32-289 5-343 (366)
37 2yrr_A Aminotransferase, class 99.5 2.5E-12 8.4E-17 120.3 24.1 240 33-288 2-329 (353)
38 2z9v_A Aspartate aminotransfer 99.5 2.9E-12 9.9E-17 122.3 24.3 235 36-287 14-346 (392)
39 1eg5_A Aminotransferase; PLP-d 99.5 1.5E-12 5.1E-17 123.4 21.9 231 38-280 9-320 (384)
40 3lvm_A Cysteine desulfurase; s 99.5 6.2E-13 2.1E-17 128.4 19.0 243 27-280 18-343 (423)
41 1vjo_A Alanine--glyoxylate ami 99.5 3.3E-12 1.1E-16 122.0 23.9 241 31-287 34-370 (393)
42 3kgw_A Alanine-glyoxylate amin 99.5 3.6E-12 1.2E-16 121.1 24.0 243 30-288 22-364 (393)
43 1c4k_A Protein (ornithine deca 99.5 4.5E-13 1.5E-17 140.0 17.8 202 80-286 177-541 (730)
44 3n75_A LDC, lysine decarboxyla 99.5 1.2E-13 4.1E-18 143.7 13.2 198 78-282 197-529 (715)
45 3ht4_A Aluminum resistance pro 99.5 1E-13 3.5E-18 136.5 12.0 246 11-274 7-344 (431)
46 1elu_A L-cysteine/L-cystine C- 99.5 8.5E-13 2.9E-17 125.5 17.8 239 41-288 27-369 (390)
47 3cai_A Possible aminotransfera 99.5 4.2E-12 1.4E-16 121.9 22.2 235 37-280 33-363 (406)
48 3qm2_A Phosphoserine aminotran 99.5 4.1E-13 1.4E-17 130.5 14.8 245 32-288 28-362 (386)
49 3f9t_A TDC, L-tyrosine decarbo 99.5 8.9E-12 3.1E-16 118.2 23.6 232 41-289 41-376 (397)
50 3dzz_A Putative pyridoxal 5'-p 99.5 4.2E-12 1.4E-16 120.9 21.2 244 31-289 28-369 (391)
51 3h14_A Aminotransferase, class 99.5 9.3E-12 3.2E-16 119.1 23.6 250 17-280 18-344 (391)
52 2c0r_A PSAT, phosphoserine ami 99.5 1.2E-12 4.1E-17 124.1 16.8 246 31-288 4-338 (362)
53 2ch1_A 3-hydroxykynurenine tra 99.5 7E-12 2.4E-16 119.8 21.7 242 31-288 18-359 (396)
54 3ly1_A Putative histidinol-pho 99.5 1.7E-11 6E-16 115.4 24.1 232 30-288 16-332 (354)
55 3ffh_A Histidinol-phosphate am 99.5 1.3E-11 4.4E-16 116.8 22.9 232 30-288 32-346 (363)
56 1qz9_A Kynureninase; kynurenin 99.4 3.6E-12 1.2E-16 122.7 19.0 237 39-289 37-379 (416)
57 4eb5_A Probable cysteine desul 99.4 4.9E-12 1.7E-16 119.9 19.5 230 38-280 8-317 (382)
58 3ei9_A LL-diaminopimelate amin 99.4 7.6E-12 2.6E-16 121.6 21.3 236 32-281 57-392 (432)
59 2e7j_A SEP-tRNA:Cys-tRNA synth 99.4 2.2E-12 7.4E-17 122.1 15.4 225 38-280 17-326 (371)
60 1gd9_A Aspartate aminotransfer 99.4 3.2E-11 1.1E-15 115.2 23.2 246 30-288 26-365 (389)
61 3b8x_A WBDK, pyridoxamine 5-ph 99.4 2E-11 6.8E-16 117.1 21.8 219 37-280 8-334 (390)
62 3dr4_A Putative perosamine syn 99.4 3.7E-12 1.3E-16 122.1 16.5 229 31-280 23-336 (391)
63 2fyf_A PSAT, phosphoserine ami 99.4 5.4E-11 1.9E-15 114.5 23.6 258 18-289 19-376 (398)
64 3p1t_A Putative histidinol-pho 99.4 3.6E-11 1.2E-15 112.2 21.7 239 19-287 5-316 (337)
65 3qgu_A LL-diaminopimelate amin 99.4 1.2E-11 4E-16 120.9 18.9 239 29-281 68-404 (449)
66 3kax_A Aminotransferase, class 99.4 1E-11 3.4E-16 118.0 17.8 244 30-288 24-364 (383)
67 3get_A Histidinol-phosphate am 99.4 6E-11 2.1E-15 112.3 22.6 233 30-288 30-347 (365)
68 3lws_A Aromatic amino acid bet 99.4 1.6E-12 5.4E-17 122.9 11.3 227 35-281 15-319 (357)
69 3pj0_A LMO0305 protein; struct 99.4 6.4E-12 2.2E-16 118.6 15.2 234 25-282 8-322 (359)
70 3euc_A Histidinol-phosphate am 99.4 5.9E-11 2E-15 112.4 21.6 232 30-287 30-347 (367)
71 2fnu_A Aminotransferase; prote 99.4 2.1E-11 7E-16 115.5 17.9 220 38-279 7-313 (375)
72 4dq6_A Putative pyridoxal phos 99.4 4.2E-11 1.4E-15 113.9 20.1 259 15-289 18-373 (391)
73 3e9k_A Kynureninase; kynurenin 99.4 3.6E-12 1.2E-16 125.5 13.0 200 82-288 117-437 (465)
74 1w23_A Phosphoserine aminotran 99.4 7.1E-11 2.4E-15 111.3 21.4 247 31-289 3-338 (360)
75 3vax_A Putative uncharacterize 99.4 8.1E-12 2.8E-16 119.5 14.5 234 36-280 26-343 (400)
76 2vyc_A Biodegradative arginine 99.3 1.1E-11 3.7E-16 130.2 15.6 205 79-288 208-582 (755)
77 3nra_A Aspartate aminotransfer 99.3 1.1E-11 3.6E-16 118.9 13.8 247 33-289 41-385 (407)
78 3l8a_A METC, putative aminotra 99.3 9.9E-11 3.4E-15 113.6 20.1 245 30-289 61-402 (421)
79 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.3 3.9E-10 1.3E-14 110.1 23.6 221 38-281 37-376 (437)
80 2bkw_A Alanine-glyoxylate amin 99.3 1.4E-10 4.7E-15 110.0 19.7 241 30-287 4-356 (385)
81 2z61_A Probable aspartate amin 99.3 2.7E-10 9.3E-15 108.1 21.7 244 29-289 28-351 (370)
82 3mad_A Sphingosine-1-phosphate 99.3 1.9E-10 6.5E-15 114.8 21.3 238 43-288 109-445 (514)
83 3ke3_A Putative serine-pyruvat 99.3 1.5E-10 5.2E-15 110.9 18.4 197 76-280 35-334 (379)
84 3ftb_A Histidinol-phosphate am 99.3 6.4E-10 2.2E-14 104.7 22.5 224 30-280 26-325 (361)
85 3fdb_A Beta C-S lyase, putativ 99.3 4.2E-10 1.4E-14 106.6 21.2 236 29-280 22-339 (377)
86 1gc0_A Methionine gamma-lyase; 99.3 7.3E-11 2.5E-15 114.0 16.1 229 30-280 27-338 (398)
87 3frk_A QDTB; aminotransferase, 99.3 1.4E-11 4.8E-16 117.3 10.9 217 39-280 12-308 (373)
88 2x5d_A Probable aminotransfera 99.3 4.6E-10 1.6E-14 108.3 21.6 248 30-289 37-378 (412)
89 1c7n_A Cystalysin; transferase 99.3 4.3E-10 1.5E-14 107.7 21.2 243 31-288 32-372 (399)
90 3nyt_A Aminotransferase WBPE; 99.3 5.3E-11 1.8E-15 113.3 14.1 217 36-280 8-307 (367)
91 3g0t_A Putative aminotransfera 99.3 4.8E-10 1.6E-14 108.6 21.0 247 30-289 44-416 (437)
92 1v2d_A Glutamine aminotransfer 99.2 6.2E-10 2.1E-14 106.0 20.9 228 30-280 25-332 (381)
93 1j32_A Aspartate aminotransfer 99.2 6.6E-10 2.3E-14 105.9 20.8 248 29-288 29-366 (388)
94 3vp6_A Glutamate decarboxylase 99.2 3.4E-10 1.2E-14 113.5 19.3 217 69-288 128-481 (511)
95 3dyd_A Tyrosine aminotransfera 99.2 9.5E-10 3.3E-14 107.0 21.9 254 18-288 39-403 (427)
96 1mdo_A ARNB aminotransferase; 99.2 3.2E-10 1.1E-14 108.2 18.2 224 32-280 10-328 (393)
97 1b9h_A AHBA synthase, protein 99.2 6.3E-10 2.2E-14 106.2 20.1 220 40-281 13-322 (388)
98 2o1b_A Aminotransferase, class 99.2 8E-10 2.7E-14 106.7 20.9 248 31-289 48-383 (404)
99 3ruy_A Ornithine aminotransfer 99.2 5.4E-10 1.9E-14 106.8 19.5 226 42-289 53-372 (392)
100 2dou_A Probable N-succinyldiam 99.2 1.1E-09 3.8E-14 104.1 21.4 239 29-280 24-341 (376)
101 1o69_A Aminotransferase; struc 99.2 3E-10 1E-14 109.3 17.4 219 38-281 6-331 (394)
102 3cq5_A Histidinol-phosphate am 99.2 1.5E-09 5.3E-14 103.0 21.8 239 32-289 32-349 (369)
103 2c81_A Glutamine-2-deoxy-scyll 99.2 4.6E-10 1.6E-14 108.6 18.0 227 37-280 9-340 (418)
104 2gb3_A Aspartate aminotransfer 99.2 2.1E-09 7.1E-14 103.7 22.5 235 30-280 43-362 (409)
105 1u08_A Hypothetical aminotrans 99.2 1E-09 3.6E-14 104.6 20.0 256 12-280 13-351 (386)
106 3piu_A 1-aminocyclopropane-1-c 99.2 2.8E-10 9.5E-15 110.7 16.2 245 32-288 40-410 (435)
107 2oga_A Transaminase; PLP-depen 99.2 1.2E-10 4.2E-15 112.1 13.5 225 30-280 30-336 (399)
108 3ju7_A Putative PLP-dependent 99.2 1.5E-10 5.1E-15 111.5 14.0 214 43-280 15-317 (377)
109 1jg8_A L-ALLO-threonine aldola 99.2 3E-10 1E-14 106.5 15.8 232 33-287 6-322 (347)
110 2dgk_A GAD-beta, GADB, glutama 99.2 2.2E-09 7.4E-14 105.4 22.3 254 16-279 26-393 (452)
111 3fvs_A Kynurenine--oxoglutarat 99.2 7.3E-10 2.5E-14 106.9 18.7 264 7-280 6-380 (422)
112 3fkd_A L-threonine-O-3-phospha 99.2 2.8E-09 9.7E-14 100.2 22.2 226 30-281 15-307 (350)
113 2z67_A O-phosphoseryl-tRNA(SEC 99.2 2.5E-10 8.7E-15 112.5 15.5 190 74-276 131-406 (456)
114 1o4s_A Aspartate aminotransfer 99.2 1.8E-09 6.3E-14 103.4 20.8 241 30-289 41-369 (389)
115 2po3_A 4-dehydrase; external a 99.2 4.2E-10 1.4E-14 109.3 16.2 225 34-280 20-328 (424)
116 1wyu_B Glycine dehydrogenase s 99.2 3.4E-09 1.2E-13 104.9 22.8 155 124-279 204-402 (474)
117 3uwc_A Nucleotide-sugar aminot 99.2 1.7E-10 5.7E-15 109.5 12.7 273 32-330 8-372 (374)
118 2o0r_A RV0858C (N-succinyldiam 99.2 1.9E-09 6.6E-14 103.9 20.4 257 11-280 7-348 (411)
119 2x3l_A ORN/Lys/Arg decarboxyla 99.2 4.7E-10 1.6E-14 110.5 15.8 196 82-290 63-333 (446)
120 2zc0_A Alanine glyoxylate tran 99.2 4.3E-09 1.5E-13 100.9 22.1 227 42-280 50-364 (407)
121 2oat_A Ornithine aminotransfer 99.2 1.5E-09 5.2E-14 106.4 18.9 237 33-289 79-417 (439)
122 4adb_A Succinylornithine trans 99.1 2.6E-09 8.9E-14 102.3 20.0 226 43-289 57-378 (406)
123 1d2f_A MALY protein; aminotran 99.1 4.5E-09 1.5E-13 100.3 20.7 235 31-280 29-352 (390)
124 1z7d_A Ornithine aminotransfer 99.1 9.1E-10 3.1E-14 107.7 16.1 229 42-289 82-407 (433)
125 3nx3_A Acoat, acetylornithine 99.1 2.9E-09 9.8E-14 102.0 19.0 225 43-289 54-373 (395)
126 3a9z_A Selenocysteine lyase; P 99.1 1.4E-09 4.8E-14 105.3 16.8 239 32-280 19-371 (432)
127 3k40_A Aromatic-L-amino-acid d 99.1 2.7E-09 9.4E-14 105.9 18.9 208 68-277 105-430 (475)
128 2qma_A Diaminobutyrate-pyruvat 99.1 7.3E-09 2.5E-13 103.0 22.0 245 33-288 95-472 (497)
129 1xi9_A Putative transaminase; 99.1 9.7E-09 3.3E-13 98.8 21.7 247 30-289 38-383 (406)
130 1yiz_A Kynurenine aminotransfe 99.1 7.5E-09 2.5E-13 100.2 20.8 262 10-280 18-387 (429)
131 4e1o_A HDC, histidine decarbox 99.1 2.2E-09 7.4E-14 106.7 17.1 217 69-287 111-453 (481)
132 3e2y_A Kynurenine-oxoglutarate 99.1 1.4E-08 4.7E-13 97.3 22.2 242 30-280 23-371 (410)
133 3op7_A Aminotransferase class 99.1 6.2E-09 2.1E-13 98.7 19.5 197 83-287 70-349 (375)
134 1pff_A Methionine gamma-lyase; 99.1 3.4E-09 1.2E-13 98.9 17.4 185 82-280 4-271 (331)
135 1uu1_A Histidinol-phosphate am 99.1 1.2E-08 4.1E-13 95.6 21.1 232 31-288 20-318 (335)
136 1vef_A Acetylornithine/acetyl- 99.1 8.2E-09 2.8E-13 98.7 19.5 228 41-289 61-375 (395)
137 1svv_A Threonine aldolase; str 99.1 4.6E-09 1.6E-13 98.3 17.0 222 41-288 25-335 (359)
138 1lc5_A COBD, L-threonine-O-3-p 99.1 1E-08 3.5E-13 97.0 19.5 222 31-280 25-324 (364)
139 3ezs_A Aminotransferase ASPB; 99.0 8.6E-09 2.9E-13 97.6 18.6 226 31-280 24-336 (376)
140 1wyu_A Glycine dehydrogenase ( 99.0 1.1E-08 3.8E-13 99.8 19.5 208 75-289 107-418 (438)
141 1b5p_A Protein (aspartate amin 99.0 5.5E-08 1.9E-12 92.9 23.8 246 30-288 31-364 (385)
142 2eh6_A Acoat, acetylornithine 99.0 1.1E-08 3.7E-13 96.8 18.5 222 42-289 45-356 (375)
143 3ele_A Amino transferase; RER0 99.0 2E-08 6.8E-13 96.0 19.8 239 31-288 36-375 (398)
144 2cb1_A O-acetyl homoserine sul 99.0 2.1E-08 7.3E-13 97.1 19.3 191 72-281 56-354 (412)
145 1vp4_A Aminotransferase, putat 99.0 4.8E-09 1.6E-13 101.8 14.7 238 30-280 43-378 (425)
146 2zyj_A Alpha-aminodipate amino 99.0 8.7E-09 3E-13 98.7 16.0 234 30-280 32-353 (397)
147 1s0a_A Adenosylmethionine-8-am 99.0 8.1E-08 2.8E-12 93.0 22.7 157 125-289 206-402 (429)
148 2pb2_A Acetylornithine/succiny 99.0 3.4E-08 1.2E-12 95.9 19.9 228 43-289 75-396 (420)
149 3jtx_A Aminotransferase; NP_28 99.0 7E-08 2.4E-12 91.9 21.0 234 30-280 30-355 (396)
150 2rfv_A Methionine gamma-lyase; 99.0 4.4E-09 1.5E-13 101.2 12.7 217 35-274 31-331 (398)
151 2ord_A Acoat, acetylornithine 99.0 1.6E-08 5.5E-13 96.8 16.5 229 40-289 52-375 (397)
152 3asa_A LL-diaminopimelate amin 99.0 9.6E-08 3.3E-12 91.7 21.9 235 30-280 33-356 (400)
153 1fg7_A Histidinol phosphate am 98.9 4.2E-08 1.4E-12 92.9 18.9 194 82-288 64-338 (356)
154 2fq6_A Cystathionine beta-lyas 98.9 1.2E-08 4E-13 99.8 14.8 226 31-276 44-353 (415)
155 2ez2_A Beta-tyrosinase, tyrosi 98.9 4.1E-08 1.4E-12 95.8 18.7 213 42-278 56-378 (456)
156 1js3_A DDC;, DOPA decarboxylas 98.9 4E-08 1.4E-12 97.2 18.7 218 68-288 105-450 (486)
157 2oqx_A Tryptophanase; lyase, p 98.9 2.5E-08 8.6E-13 97.5 16.8 152 124-280 184-391 (467)
158 1v72_A Aldolase; PLP-dependent 98.9 2.8E-08 9.6E-13 92.9 16.2 228 36-288 12-330 (356)
159 3if2_A Aminotransferase; YP_26 98.9 5.6E-08 1.9E-12 94.4 18.8 156 124-281 207-396 (444)
160 3qhx_A Cystathionine gamma-syn 98.9 2.3E-08 7.7E-13 96.6 15.9 193 72-279 66-340 (392)
161 3ri6_A O-acetylhomoserine sulf 98.9 1.9E-08 6.3E-13 98.9 15.1 188 70-275 80-368 (430)
162 1cs1_A CGS, protein (cystathio 98.9 3.3E-08 1.1E-12 94.5 16.5 185 82-280 58-324 (386)
163 3b46_A Aminotransferase BNA3; 98.9 8.9E-08 3.1E-12 93.6 19.8 242 29-280 56-405 (447)
164 1qgn_A Protein (cystathionine 98.9 1.3E-08 4.6E-13 100.4 13.8 186 71-274 113-380 (445)
165 3tfu_A Adenosylmethionine-8-am 98.9 1.1E-07 3.6E-12 93.9 19.8 160 124-289 234-431 (457)
166 1e5e_A MGL, methionine gamma-l 98.9 3.5E-08 1.2E-12 95.6 15.8 192 70-279 60-335 (404)
167 1bw0_A TAT, protein (tyrosine 98.9 5.5E-08 1.9E-12 93.5 17.0 241 31-288 34-392 (416)
168 3acz_A Methionine gamma-lyase; 98.9 2.1E-08 7.1E-13 96.5 13.9 226 32-280 23-330 (389)
169 3aow_A Putative uncharacterize 98.9 5.5E-08 1.9E-12 95.5 16.9 227 42-280 92-405 (448)
170 3dxv_A Alpha-amino-epsilon-cap 98.9 8E-08 2.7E-12 93.4 17.9 156 124-288 202-402 (439)
171 1ax4_A Tryptophanase; tryptoph 98.9 5.1E-08 1.8E-12 95.3 16.6 153 124-280 184-390 (467)
172 3i5t_A Aminotransferase; pyrid 98.8 1.9E-07 6.7E-12 92.4 20.5 159 125-289 223-432 (476)
173 2jis_A Cysteine sulfinic acid 98.8 9E-08 3.1E-12 95.6 17.9 173 68-245 140-427 (515)
174 3g7q_A Valine-pyruvate aminotr 98.8 1.3E-07 4.6E-12 90.6 18.2 155 124-280 181-369 (417)
175 2epj_A Glutamate-1-semialdehyd 98.8 8.1E-08 2.8E-12 93.3 16.6 153 124-282 204-402 (434)
176 3rq1_A Aminotransferase class 98.8 1.6E-07 5.4E-12 90.5 18.5 157 126-288 182-393 (418)
177 1iay_A ACC synthase 2, 1-amino 98.8 9.6E-08 3.3E-12 92.4 16.8 162 124-289 189-406 (428)
178 3l44_A Glutamate-1-semialdehyd 98.8 4E-07 1.4E-11 88.2 21.1 156 125-286 204-407 (434)
179 3gju_A Putative aminotransfera 98.8 3.6E-07 1.2E-11 89.7 21.0 159 125-289 223-434 (460)
180 1sff_A 4-aminobutyrate aminotr 98.8 1.8E-07 6.3E-12 90.0 18.5 160 125-289 201-402 (426)
181 2aeu_A Hypothetical protein MJ 98.8 3E-07 1E-11 88.0 19.6 230 32-288 30-347 (374)
182 3tcm_A Alanine aminotransferas 98.8 1.4E-07 4.8E-12 94.0 18.0 153 124-281 238-457 (500)
183 4eu1_A Mitochondrial aspartate 98.8 7.2E-08 2.4E-12 92.7 15.3 157 125-290 185-391 (409)
184 3ihj_A Alanine aminotransferas 98.8 3.3E-07 1.1E-11 91.3 20.6 153 124-281 236-456 (498)
185 2okj_A Glutamate decarboxylase 98.8 2.2E-07 7.4E-12 92.4 19.0 171 72-245 128-412 (504)
186 3n5m_A Adenosylmethionine-8-am 98.8 3.6E-07 1.2E-11 89.2 20.3 153 124-281 216-414 (452)
187 2ctz_A O-acetyl-L-homoserine s 98.8 4.5E-08 1.5E-12 95.4 13.6 121 32-165 22-189 (421)
188 3cog_A Cystathionine gamma-lya 98.8 3.8E-08 1.3E-12 95.5 12.6 217 33-280 40-339 (403)
189 3ndn_A O-succinylhomoserine su 98.8 9.2E-08 3.1E-12 93.3 14.9 190 34-242 47-302 (414)
190 2r2n_A Kynurenine/alpha-aminoa 98.8 6.1E-07 2.1E-11 86.9 20.5 155 124-280 191-383 (425)
191 3t18_A Aminotransferase class 98.8 1.2E-07 4.2E-12 91.1 15.1 161 124-289 178-392 (413)
192 3b1d_A Betac-S lyase; HET: PLP 98.2 9.2E-10 3.1E-14 105.5 0.0 235 31-280 32-356 (392)
193 2e7u_A Glutamate-1-semialdehyd 98.7 3.6E-07 1.2E-11 88.4 18.2 152 124-282 200-398 (424)
194 7aat_A Aspartate aminotransfer 98.7 4.1E-07 1.4E-11 87.0 18.2 160 124-292 176-385 (401)
195 3hmu_A Aminotransferase, class 98.7 6E-07 2E-11 88.9 19.6 159 125-289 225-430 (472)
196 3a8u_X Omega-amino acid--pyruv 98.7 3.4E-07 1.2E-11 89.3 17.2 162 125-289 221-425 (449)
197 3i4j_A Aminotransferase, class 98.7 1.6E-06 5.5E-11 83.8 21.6 151 125-281 192-389 (430)
198 3k28_A Glutamate-1-semialdehyd 98.7 1.6E-06 5.4E-11 84.1 21.5 155 124-286 201-404 (429)
199 3dod_A Adenosylmethionine-8-am 98.7 1.5E-06 5E-11 85.0 21.4 160 125-288 212-420 (448)
200 2eo5_A 419AA long hypothetical 98.7 5.3E-07 1.8E-11 87.3 18.0 153 125-289 214-396 (419)
201 3hl2_A O-phosphoseryl-tRNA(SEC 98.7 9.9E-07 3.4E-11 87.0 18.9 146 126-277 219-401 (501)
202 4e77_A Glutamate-1-semialdehyd 98.7 1.3E-06 4.3E-11 84.7 19.6 154 124-282 201-400 (429)
203 2cy8_A D-phgat, D-phenylglycin 98.7 4.7E-07 1.6E-11 88.4 16.3 150 124-280 202-406 (453)
204 3nmy_A Xometc, cystathionine g 98.7 2.1E-07 7.3E-12 90.3 13.4 154 70-239 65-285 (400)
205 4ao9_A Beta-phenylalanine amin 98.6 3.3E-07 1.1E-11 90.7 14.7 175 43-238 105-360 (454)
206 1n8p_A Cystathionine gamma-lya 98.6 2.9E-07 9.8E-12 88.9 13.8 148 81-240 60-275 (393)
207 4a6r_A Omega transaminase; tra 98.6 7.6E-07 2.6E-11 87.3 16.7 158 125-289 221-427 (459)
208 3fq8_A Glutamate-1-semialdehyd 98.6 5.7E-06 1.9E-10 79.9 22.6 153 124-282 200-398 (427)
209 3fsl_A Aromatic-amino-acid ami 98.6 2.6E-06 8.8E-11 81.0 19.2 156 125-289 175-379 (397)
210 3ez1_A Aminotransferase MOCR f 98.6 3.2E-06 1.1E-10 81.4 19.9 253 10-280 6-373 (423)
211 4ffc_A 4-aminobutyrate aminotr 98.6 1.4E-06 4.9E-11 85.4 17.5 158 125-289 227-427 (453)
212 4f4e_A Aromatic-amino-acid ami 98.6 2.3E-06 7.8E-11 82.6 18.1 157 124-289 196-401 (420)
213 3oks_A 4-aminobutyrate transam 98.6 2.4E-06 8.4E-11 83.7 18.4 159 124-289 228-429 (451)
214 1yaa_A Aspartate aminotransfer 98.5 2.5E-06 8.5E-11 81.8 17.2 146 135-289 190-390 (412)
215 2x5f_A Aspartate_tyrosine_phen 98.5 1.3E-06 4.3E-11 84.5 14.9 163 124-289 190-408 (430)
216 2ay1_A Aroat, aromatic amino a 98.5 1.7E-06 5.9E-11 82.2 15.3 142 139-289 190-375 (394)
217 2q7w_A Aspartate aminotransfer 98.4 3.4E-06 1.2E-10 80.1 15.2 143 139-290 193-379 (396)
218 1ibj_A CBL, cystathionine beta 98.4 1.7E-06 5.9E-11 85.6 13.1 183 83-279 140-405 (464)
219 3ppl_A Aspartate aminotransfer 98.4 1.7E-05 5.9E-10 76.5 19.8 153 124-280 181-378 (427)
220 3f6t_A Aspartate aminotransfer 98.4 7.1E-06 2.4E-10 82.4 17.4 163 124-288 245-503 (533)
221 3bc8_A O-phosphoseryl-tRNA(SEC 98.4 2.7E-06 9.3E-11 83.9 13.5 118 124-245 199-347 (450)
222 2cjg_A L-lysine-epsilon aminot 98.3 4.7E-06 1.6E-10 81.6 13.3 158 124-288 232-425 (449)
223 3d6k_A Putative aminotransfera 98.3 2E-05 7E-10 76.0 17.6 257 8-280 11-376 (422)
224 1ajs_A Aspartate aminotransfer 98.3 3.7E-05 1.3E-09 73.5 18.2 142 139-289 204-390 (412)
225 3meb_A Aspartate aminotransfer 98.2 0.00016 5.4E-09 70.5 22.1 147 135-289 216-423 (448)
226 1zod_A DGD, 2,2-dialkylglycine 98.1 1.8E-05 6.1E-10 76.4 12.0 158 125-287 205-408 (433)
227 2yky_A Beta-transaminase; tran 97.4 4.3E-07 1.5E-11 90.1 0.0 217 43-280 118-431 (465)
228 1ohv_A 4-aminobutyrate aminotr 98.1 2.4E-05 8E-10 77.3 12.3 154 125-289 260-449 (472)
229 4atq_A 4-aminobutyrate transam 97.9 0.00015 5.2E-09 71.6 13.8 147 139-289 248-433 (456)
230 3bwn_A AT1G70560, L-tryptophan 97.8 7.2E-05 2.5E-09 71.6 9.1 147 124-280 158-351 (391)
231 4e3q_A Pyruvate transaminase; 97.6 0.0024 8.1E-08 63.3 18.2 143 139-287 258-444 (473)
232 2zy4_A L-aspartate beta-decarb 97.0 0.021 7E-07 57.3 17.0 39 124-162 246-291 (546)
233 2hox_A ALLIIN lyase 1; cystein 97.0 0.0039 1.3E-07 60.4 11.0 229 31-280 57-389 (427)
234 4h51_A Aspartate aminotransfer 97.0 0.18 6E-06 48.9 22.8 66 217-291 329-398 (420)
235 3k7y_A Aspartate aminotransfer 96.7 0.16 5.6E-06 48.7 20.2 156 124-289 174-384 (405)
236 4a0g_A Adenosylmethionine-8-am 96.6 0.003 1E-07 66.8 7.4 163 124-291 595-808 (831)
237 2ejb_A Probable aromatic acid 60.3 18 0.00063 30.7 6.4 64 30-94 118-182 (189)
238 1sbz_A Probable aromatic acid 52.0 42 0.0014 28.7 7.4 65 30-94 114-178 (197)
239 1ohv_A 4-aminobutyrate aminotr 46.8 6 0.00021 38.2 1.2 68 43-117 81-148 (472)
240 3zqu_A Probable aromatic acid 46.8 49 0.0017 28.5 7.0 64 30-94 131-195 (209)
241 1zco_A 2-dehydro-3-deoxyphosph 42.8 23 0.00078 31.7 4.3 41 124-164 159-205 (262)
242 2nwr_A 2-dehydro-3-deoxyphosph 42.3 20 0.00068 32.3 3.8 37 124-162 147-187 (267)
243 3nvt_A 3-deoxy-D-arabino-heptu 39.6 18 0.00061 34.4 3.2 40 124-163 278-323 (385)
244 2qkf_A 3-deoxy-D-manno-octulos 38.8 17 0.00058 33.0 2.8 39 124-162 158-201 (280)
245 1zod_A DGD, 2,2-dialkylglycine 37.2 79 0.0027 29.2 7.4 61 43-116 61-122 (433)
246 1vr6_A Phospho-2-dehydro-3-deo 36.9 21 0.0007 33.6 3.1 40 124-163 242-287 (350)
247 1uta_A FTSN, MSGA, cell divisi 36.2 53 0.0018 23.3 4.7 50 226-277 20-72 (81)
248 1o60_A 2-dehydro-3-deoxyphosph 36.1 19 0.00065 32.9 2.7 41 124-164 161-206 (292)
249 3sz8_A 2-dehydro-3-deoxyphosph 31.9 36 0.0012 31.0 3.8 43 124-166 163-210 (285)
250 3tml_A 2-dehydro-3-deoxyphosph 29.7 34 0.0011 31.2 3.2 42 124-166 166-211 (288)
251 1n8f_A DAHP synthetase; (beta/ 28.7 62 0.0021 30.3 4.9 39 124-163 227-271 (350)
252 1vs1_A 3-deoxy-7-phosphoheptul 28.0 45 0.0015 30.1 3.8 41 124-164 174-220 (276)
253 2cjg_A L-lysine-epsilon aminot 26.0 89 0.003 29.4 5.7 62 42-116 71-139 (449)
254 1t57_A Conserved protein MTH16 23.6 3.5E+02 0.012 23.2 8.8 53 69-133 31-83 (206)
255 3fs2_A 2-dehydro-3-deoxyphosph 23.5 43 0.0015 30.7 2.7 42 124-166 184-229 (298)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=3.7e-91 Score=682.20 Aligned_cols=333 Identities=50% Similarity=0.846 Sum_probs=298.0
Q ss_pred chhh-hhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669 4 STML-HGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ 82 (337)
Q Consensus 4 ~~~~-~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~ 82 (337)
+.|. +++|++.||||+++|++|.+||+++|+|||||||+||.|++|++|+|+|||+||+||+|||+||+++|++|.+|+
T Consensus 27 ~~~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~ 106 (490)
T 3ou5_A 27 RGWTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ 106 (490)
T ss_dssp -CCSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHH
T ss_pred cccccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHH
Confidence 3463 678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------------
Q psy10669 83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------- 119 (337)
Q Consensus 83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------- 119 (337)
+|++++||+++++||+||||+||++||++||.||++|
T Consensus 107 ~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~ 186 (490)
T 3ou5_A 107 RRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK 186 (490)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETT
T ss_pred HHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCC
Confidence 9999999999999999999999999999999999876
Q ss_pred ----------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeeec--
Q psy10669 120 ----------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGVT-- 172 (337)
Q Consensus 120 ----------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T~-- 172 (337)
+++ |||+||+|.|+|++++|++++++|||++||+||+|+||.+|||++ +++|+
T Consensus 187 t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHK 266 (490)
T 3ou5_A 187 TGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHK 266 (490)
T ss_dssp TTEECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSS
T ss_pred CCcccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccc
Confidence 222 499999999999999999999999999999999999999999992 45443
Q ss_pred ----cCCchhhh-----------------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669 173 ----KTGEKILY-----------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231 (337)
Q Consensus 173 ----~~Gg~i~~-----------------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~ 231 (337)
|+||+|++ ++.++|++++||++||+||+|.|||++++++|+++++|++|++||++||++
T Consensus 267 TLrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAka 346 (490)
T 3ou5_A 267 TLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARA 346 (490)
T ss_dssp TTCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred cccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Confidence 46999986 367899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHH
Q psy10669 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVD 300 (337)
Q Consensus 232 l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~ 300 (337)
|++.|.+.||+|++|+||||+++||+++.+++|.++++.|+++||.+|||. ||||||+++|+|||+++|
T Consensus 347 LA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~d 426 (490)
T 3ou5_A 347 MADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDD 426 (490)
T ss_dssp HHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHH
T ss_pred HHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHH
Confidence 999999999999999999999999999999999999999999999999988 999999999999999877
Q ss_pred HHHH------H---------------------hhCCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy10669 301 FQTC------L---------------------HKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336 (337)
Q Consensus 301 ~~~~------~---------------------~~~~~~~~~~~~lr~~V~~~~~~fp~p~~~~ 336 (337)
|.+. + +++.++.+++.++|+||.+||++||+|+||+
T Consensus 427 m~~IA~~I~~~l~~~~~~~~~~~kl~~f~~~~~~~~~~~~~i~~lr~~V~~l~~~FP~pg~d~ 489 (490)
T 3ou5_A 427 FRRVVDFIDEGVNIGLEVKSKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 489 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhcCcccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7542 1 1233445678999999999999999999987
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=1.3e-59 Score=471.68 Aligned_cols=329 Identities=50% Similarity=0.847 Sum_probs=281.6
Q ss_pred hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
+.|+++||+++++|++|++||+++|+|||||||+||.|++|+.+.+.++|++|+||+|+|+|++.++++|.+|+++++++
T Consensus 33 ~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l 112 (490)
T 2a7v_A 33 ESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA 112 (490)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred chhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------------------
Q psy10669 89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------------- 119 (337)
Q Consensus 89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------------- 119 (337)
||+++++|+++|+++|||+||.+++.+++++
T Consensus 113 ~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~ 192 (490)
T 2a7v_A 113 FDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDY 192 (490)
T ss_dssp TTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCH
T ss_pred cCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCH
Confidence 9999988988999999999999999998654
Q ss_pred ----ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cC
Q psy10669 120 ----NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KT 174 (337)
Q Consensus 120 ----~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~ 174 (337)
+.. +||+||++.++||+.+|+++|++||+++|++|++|+||.+|+++ .+++|. ++
T Consensus 193 d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~ 272 (490)
T 2a7v_A 193 NQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGAR 272 (490)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCS
T ss_pred HHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCcccc
Confidence 001 27999999999999999999999999999999999999998875 133332 45
Q ss_pred Cchhhh--h---------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669 175 GEKILY--D---------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 175 Gg~i~~--~---------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~ 237 (337)
||+|++ + +.+++++.+||+++|+|+++.++|+++|++++..+++++|++++++|+++|++.|.
T Consensus 273 GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~ 352 (490)
T 2a7v_A 273 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL 352 (490)
T ss_dssp CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 888875 2 57899999999999999999999999999999878899999999999999999999
Q ss_pred hCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHHHH---
Q psy10669 238 KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQT--- 303 (337)
Q Consensus 238 ~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~~~--- 303 (337)
+.|++++.+++++|+++|+++..++++.++.+.|+++||.++++. |||||++++|+||++.+||..
T Consensus 353 ~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~ 432 (490)
T 2a7v_A 353 ERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVD 432 (490)
T ss_dssp HTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHH
T ss_pred HcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHH
Confidence 999999877799999999999988899999999999999999753 899999999999999888753
Q ss_pred ---HHhh---------------------CCCcHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy10669 304 ---CLHK---------------------NEDIVKKVAALKKEIEDYSNQFEMPGQADL 337 (337)
Q Consensus 304 ---~~~~---------------------~~~~~~~~~~lr~~V~~~~~~fp~p~~~~~ 337 (337)
.++. ++...+++.++|++|.+||++||+|+++++
T Consensus 433 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 490 (490)
T 2a7v_A 433 FIDEGVNIGLEVKSKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDEH 490 (490)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSCC
T ss_pred HHHHHHHhhhhhhhhhchhhHHHhhhccChhhHHHHHHHHHHHHHHHHhCCCCCcCCC
Confidence 1221 111124588999999999999999999874
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=6.5e-49 Score=393.14 Aligned_cols=335 Identities=50% Similarity=0.806 Sum_probs=290.1
Q ss_pred cchhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669 3 SSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ 82 (337)
Q Consensus 3 ~~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~ 82 (337)
+..|+.+.|...||++++++.+|..||++.|+|++|||++||.|++++.+.+.++|++|+||+|+|+|++.++++|..++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~ 96 (483)
T 1rv3_A 17 HEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ 96 (483)
T ss_dssp HHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred HHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHH
Confidence 34566667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------------
Q psy10669 83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------- 119 (337)
Q Consensus 83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------- 119 (337)
++++++||+++.+|+++|+++||+.||++++.+++++
T Consensus 97 ~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~ 176 (483)
T 1rv3_A 97 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD 176 (483)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT
T ss_pred HHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC
Confidence 9999999999877878899999999999999998654
Q ss_pred ----------cc---ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeee-c-
Q psy10669 120 ----------NN---ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGV-T- 172 (337)
Q Consensus 120 ----------~~---a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T-~- 172 (337)
+. .+||+|+++.+++++..|+++|++||+++|++|++|+||.+|++. .+++| +
T Consensus 177 ~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K 256 (483)
T 1rv3_A 177 TGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHK 256 (483)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSG
T ss_pred CCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcc
Confidence 00 137999998888899999999999999999999999999998876 12333 2
Q ss_pred ----cCCchhhh--h---------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669 173 ----KTGEKILY--D---------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231 (337)
Q Consensus 173 ----~~Gg~i~~--~---------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~ 231 (337)
++||++++ + +.++++..+||+.+|+|+++.++++++++.++.++.++++++++.+|+++
T Consensus 257 ~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~ 336 (483)
T 1rv3_A 257 TLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRA 336 (483)
T ss_dssp GGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence 35888875 2 55678888899999999999999999999998777889999999999999
Q ss_pred HHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC-----------cccchhhhhHhhhCCCHHH
Q psy10669 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN-----------TGISLAAEIQAISGPKLVD 300 (337)
Q Consensus 232 l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~-----------~girig~~~~t~~G~~~~~ 300 (337)
|++.|.+.|++++.+++++|.++|+++..++++.++.+.|++.||.++++ .+|||+++..|+||++.+|
T Consensus 337 l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed 416 (483)
T 1rv3_A 337 LSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD 416 (483)
T ss_dssp HHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred HHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence 99999999999988767899999999887788999999999999999943 1899999999999999877
Q ss_pred HHH------HHhhC--------C-------------CcH---HHHHHHHHHHHHHHhcCCCCCCCCC
Q psy10669 301 FQT------CLHKN--------E-------------DIV---KKVAALKKEIEDYSNQFEMPGQADL 337 (337)
Q Consensus 301 ~~~------~~~~~--------~-------------~~~---~~~~~lr~~V~~~~~~fp~p~~~~~ 337 (337)
+.. .++.. . .+. +.+.++|++|.+||++||+|+++++
T Consensus 417 i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (483)
T 1rv3_A 417 FQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLPGF 483 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCSSSCC
T ss_pred HHHHHHHHHHHHHhccchhccccccchhhHHHHhhccccchhHHHHHHHHHHHHHHHhCCCCCcCCC
Confidence 653 12221 1 111 2688999999999999999999864
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.3e-40 Score=323.69 Aligned_cols=325 Identities=38% Similarity=0.596 Sum_probs=277.8
Q ss_pred hhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS 85 (337)
Q Consensus 6 ~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~ 85 (337)
++.+.+...||++++.+.+|..||.+.|+|+++||+++|.|++++.+.+.++|+.|++++|+|.|+...+.+|.++++++
T Consensus 21 ~~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~l 100 (447)
T 3h7f_A 21 SMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRA 100 (447)
T ss_dssp GGGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999888899999999999999999999999998899
Q ss_pred HhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------
Q psy10669 86 LKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------------- 119 (337)
Q Consensus 86 a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------------- 119 (337)
+++||.+. +.++++||+.||.+++.+++++
T Consensus 101 a~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 176 (447)
T 3h7f_A 101 KALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDA 176 (447)
T ss_dssp HHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHH
T ss_pred HHHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHH
Confidence 99999986 5677899999999999998654
Q ss_pred --c-c--ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCc
Q psy10669 120 --N-N--ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGE 176 (337)
Q Consensus 120 --~-~--a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg 176 (337)
+ . .+|++|+++.+++++..|+++|+++|+++|++|++|++|..|++. .+++|. ++||
T Consensus 177 l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~gG 256 (447)
T 3h7f_A 177 VRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSG 256 (447)
T ss_dssp HHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSCE
T ss_pred HHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCeE
Confidence 0 0 027899998788999999999999999999999999999887643 123332 3578
Q ss_pred hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCC
Q psy10669 177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTD 249 (337)
Q Consensus 177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~ 249 (337)
++++ ++.+.+++..+|+.+|+++++.++++++++.++..++++++++++.+|+++|++.|.+. |++++.++++
T Consensus 257 ~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~ 336 (447)
T 3h7f_A 257 LIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTD 336 (447)
T ss_dssp EEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCS
T ss_pred EEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCC
Confidence 8876 58888888889999999999999999999998876678999999999999999999988 9999876689
Q ss_pred CeEEEEEecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCc
Q psy10669 250 VHLILIDLRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDI 311 (337)
Q Consensus 250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~ 311 (337)
+|.++++++..+.++..+.+.|++.||.++++. ++|||++..|++|++.+++.+ .+++..++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~~~ 416 (447)
T 3h7f_A 337 VHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGSS 416 (447)
T ss_dssp SSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSGGG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhccCc
Confidence 999999998888888999999999999998431 899999999999999777654 23444332
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-CCC
Q psy10669 312 VKKVAALKKEIEDYSNQFEMP-GQA 335 (337)
Q Consensus 312 ~~~~~~lr~~V~~~~~~fp~p-~~~ 335 (337)
.+ ++++|++|.+|+..||++ +++
T Consensus 417 ~~-~~~~~~~v~~~~~~~~~~~~~~ 440 (447)
T 3h7f_A 417 VD-VSALKDRATRLARAFPLYDGLE 440 (447)
T ss_dssp CC-HHHHHHHHHHHHHHSCSSTTGG
T ss_pred hh-HHHHHHHHHHHHHhCCCCCCch
Confidence 22 889999999999999994 454
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=6.3e-36 Score=289.71 Aligned_cols=320 Identities=39% Similarity=0.640 Sum_probs=275.2
Q ss_pred hhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF 89 (337)
Q Consensus 10 ~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf 89 (337)
.+..+||++++.+.+|..+|.+.|.|+++||+++|.|++++...+.+.|+.|++++++|.|+...+++|..+++.+++++
T Consensus 5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 84 (417)
T 3n0l_A 5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF 84 (417)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 57889999999999999999999999999999999999999988878899999999999999888999999999999999
Q ss_pred CCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------c--c
Q psy10669 90 NLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------------------------N--N 121 (337)
Q Consensus 90 g~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------------------------~--~ 121 (337)
|.++ .+|.++||++||..++.+++++ + +
T Consensus 85 g~~~----~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i 160 (417)
T 3n0l_A 85 NCKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIA 160 (417)
T ss_dssp TCSE----EECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHH
T ss_pred CCCC----cceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHH
Confidence 9976 4589999999999988998654 0 0
Q ss_pred --ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCchhhh-
Q psy10669 122 --ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGEKILY- 180 (337)
Q Consensus 122 --a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg~i~~- 180 (337)
.+|++|+++.++++...|+++|.++|+++|++|++|++|..|++. .+++++ +.||++++
T Consensus 161 ~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~ 240 (417)
T 3n0l_A 161 KKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMTN 240 (417)
T ss_dssp HHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSCEEEEES
T ss_pred HhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCeeEEEEC
Confidence 137899998778899999999999999999999999999888762 233332 34777765
Q ss_pred --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR 258 (337)
Q Consensus 181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~ 258 (337)
++.+.+....+++.+++++++.+++++.++.+....+++++++++.+++++|.+.|.+.|+++..+++.+|++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 320 (417)
T 3n0l_A 241 DEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFL 320 (417)
T ss_dssp CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECT
T ss_pred CHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcc
Confidence 477778877788889999999999999999887666779999999999999999999999998876688999999998
Q ss_pred CCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHHHH
Q psy10669 259 KNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAALKK 320 (337)
Q Consensus 259 ~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~lr~ 320 (337)
..+.+...+.+.|++.||.++... ++|||+...++++++.+++.+ .+++...+.+.+.++++
T Consensus 321 ~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~ 400 (417)
T 3n0l_A 321 DREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVNNEKLQENIKQ 400 (417)
T ss_dssp TSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcccchhhHHHHHH
Confidence 878888999999999999988432 699999999999998776543 34555555678999999
Q ss_pred HHHHHHhcCCCCC
Q psy10669 321 EIEDYSNQFEMPG 333 (337)
Q Consensus 321 ~V~~~~~~fp~p~ 333 (337)
+|.+|+.+||+|+
T Consensus 401 ~v~~~~~~~~~~~ 413 (417)
T 3n0l_A 401 ELKKLASNFIIYE 413 (417)
T ss_dssp HHHHHHTTCCCCS
T ss_pred HHHHHHhcCCCcc
Confidence 9999999999976
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=100.00 E-value=7.4e-35 Score=282.06 Aligned_cols=327 Identities=40% Similarity=0.622 Sum_probs=259.6
Q ss_pred cchhhhhh--hhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHH
Q psy10669 3 SSTMLHGT--LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIV 80 (337)
Q Consensus 3 ~~~~~~~~--l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~ 80 (337)
|++|+... ++..||++++++.++..++.+.+.+++++||+||.|.+++...+.+.|+.|++++++|.++...+.+|.+
T Consensus 1 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (420)
T 3gbx_A 1 SNAMLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQL 80 (420)
T ss_dssp CCCBCTTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHH
T ss_pred CchHHhhhcchhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHH
Confidence 34566655 8999999999999999999999999999999999999999988778888899999999999888899999
Q ss_pred HHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------------
Q psy10669 81 AQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------------------- 119 (337)
Q Consensus 81 ~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------------------- 119 (337)
+++.+++++|.++ ..+.++||++||..++.+++++
T Consensus 81 ~~~~la~~~~~~~----~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (420)
T 3gbx_A 81 AIDRAKELFGADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKI 156 (420)
T ss_dssp HHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSC
T ss_pred HHHHHHHHhCCCC----ceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCc
Confidence 9999999999976 4577899999999988988654
Q ss_pred -----cc--c--cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------
Q psy10669 120 -----NN--A--RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------ 172 (337)
Q Consensus 120 -----~~--a--~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------ 172 (337)
+. . +|++|++..++++...|+++|.++|+++|++|++|++|..|+.. .++++.
T Consensus 157 d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g 236 (420)
T 3gbx_A 157 DYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAG 236 (420)
T ss_dssp CHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCS
T ss_pred CHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCC
Confidence 00 0 27899998788999999999999999999999999999988762 123332
Q ss_pred cCCchhhh-----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669 173 KTGEKILY-----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG 247 (337)
Q Consensus 173 ~~Gg~i~~-----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~ 247 (337)
+.||++++ ++.+.++...+++.+++++++.+++++.++.+.....++++++++.++.++|.+.|.+.|+++..++
T Consensus 237 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 316 (420)
T 3gbx_A 237 PRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGG 316 (420)
T ss_dssp CSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred CCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCC
Confidence 34788765 3667788878898899999999999999988876667789999999999999999999999998755
Q ss_pred CCCeEEEEEecCCCcchHHHHHHHhhcCceeccC-------c-----ccchhhhhHhhhCCCHHHHHH------HHhhCC
Q psy10669 248 TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN-------T-----GISLAAEIQAISGPKLVDFQT------CLHKNE 309 (337)
Q Consensus 248 t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~-------~-----girig~~~~t~~G~~~~~~~~------~~~~~~ 309 (337)
+.++++++++...+.+...+.+.|++.||.+.+. . ++||+.+..++++...+++.. .++.+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 317 TENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 7889999999877778889999999999999871 1 699999999888888666543 345555
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCC
Q psy10669 310 DIVKKVAALKKEIEDYSNQFEMPG 333 (337)
Q Consensus 310 ~~~~~~~~lr~~V~~~~~~fp~p~ 333 (337)
.+.+++++++++|.+|+++||+++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
T 3gbx_A 397 NDEATIERVKAKVLDICARFPVYA 420 (420)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCSCC
T ss_pred ccchhHHHHHHHHHHHHHhCCCCC
Confidence 667789999999999999999975
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=9.3e-33 Score=267.72 Aligned_cols=325 Identities=41% Similarity=0.603 Sum_probs=254.3
Q ss_pred chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHH
Q psy10669 4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQ 83 (337)
Q Consensus 4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~ 83 (337)
+.|+.+.+..++|++...+.++..++.+.++|++++|+++|.|++++...+.+.|+.|++++++|.|....+.++.++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 85 (425)
T 3ecd_A 6 NPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIE 85 (425)
T ss_dssp SHHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHH
T ss_pred chHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHH
Confidence 35677789999999999999999999999999999999999999999988778898999999999998877788888888
Q ss_pred HHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------------
Q psy10669 84 RSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------------- 119 (337)
Q Consensus 84 ~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------------- 119 (337)
++++++|.+. +.+.++||++||..++.+++++
T Consensus 86 ~~~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 161 (425)
T 3ecd_A 86 RVKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDY 161 (425)
T ss_dssp HHHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCH
T ss_pred HHHHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCH
Confidence 9999999986 3466888899999888888653
Q ss_pred ---c--c--ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cC
Q psy10669 120 ---N--N--ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KT 174 (337)
Q Consensus 120 ---~--~--a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~ 174 (337)
+ + .+|++|+++..+++...|+++|.++|+++|++|++|++|..|+.. .++++. +.
T Consensus 162 ~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~ 241 (425)
T 3ecd_A 162 DQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR 241 (425)
T ss_dssp HHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCS
T ss_pred HHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCC
Confidence 0 0 127889988678899999999999999999999999999887763 123332 35
Q ss_pred Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 175 GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 175 Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
||++++ ++.+.+....+++.+++++++.+++++.++.+.....++++++++.++.++|.+.|.+.|+++..+++.++
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 321 (425)
T 3ecd_A 242 GGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNH 321 (425)
T ss_dssp CEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSS
T ss_pred cEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCce
Confidence 777765 37777887778888889999999999999888766677899999999999999999999999986557889
Q ss_pred EEEEEecCCCcchHHHHHHHhhcCceec----cC--------cccchhhhhHhhhCCCHHHHHH------HHhhCC----
Q psy10669 252 LILIDLRKNKLTGSKVELVLEEIAIACN----KN--------TGISLAAEIQAISGPKLVDFQT------CLHKNE---- 309 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~----~~--------~girig~~~~t~~G~~~~~~~~------~~~~~~---- 309 (337)
++++++...+.+...+.+.|++.||.+. +. .++|||....++++...+++.+ .+++..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~~~~~ 401 (425)
T 3ecd_A 322 LLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEALRTNP 401 (425)
T ss_dssp EEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred EEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcccccc
Confidence 9999998767788899999999999998 32 1699999888888887666543 233332
Q ss_pred -CcHHHHHHHHHHHHHHHhcCCCC
Q psy10669 310 -DIVKKVAALKKEIEDYSNQFEMP 332 (337)
Q Consensus 310 -~~~~~~~~lr~~V~~~~~~fp~p 332 (337)
.+.+.+++++++|.+||++||++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~ 425 (425)
T 3ecd_A 402 EGDHATEQRVRREIFALCERFPIY 425 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHHTSCCC
T ss_pred ccCchhHHHHHHHHHHHHhcCCCC
Confidence 33566899999999999999985
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=4.9e-28 Score=233.32 Aligned_cols=314 Identities=40% Similarity=0.674 Sum_probs=251.6
Q ss_pred hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
+.+..+||+++..+.++.+++.+.+.+++++|+++|.|++++...+.++|..|++++++|.|.....++|..+++.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~ 81 (405)
T 2vi8_A 2 KYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL 81 (405)
T ss_dssp CSHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 45778999999999999999888999999999999999999998776678788999999998877889998889999999
Q ss_pred cCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------------cc--
Q psy10669 89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------------NN-- 121 (337)
Q Consensus 89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------------~~-- 121 (337)
+|.++ ..+.++||+.|+..++.+++++ .+
T Consensus 82 ~g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~ 157 (405)
T 2vi8_A 82 FGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVRE 157 (405)
T ss_dssp HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHH
T ss_pred hCCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHH
Confidence 99985 3466789999998888888643 00
Q ss_pred --c--cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCchhh
Q psy10669 122 --A--RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGEKIL 179 (337)
Q Consensus 122 --a--~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg~i~ 179 (337)
. +|++|+++++++++..|+++|.++|+++|++|++|++|+.|... .++++. +.||+++
T Consensus 158 ~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~ 237 (405)
T 2vi8_A 158 KARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMIL 237 (405)
T ss_dssp HHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEE
T ss_pred HHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCCeEEE
Confidence 0 26888888788999999999999999999999999999976543 122332 2467776
Q ss_pred h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEe
Q psy10669 180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL 257 (337)
Q Consensus 180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~ 257 (337)
. ++.+.+++...++..+++++..++++..++..+.....++.++++.++.++|.+.|.+.|+++....+.++++++++
T Consensus 238 ~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 317 (405)
T 2vi8_A 238 CQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDL 317 (405)
T ss_dssp ECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEC
T ss_pred EcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEc
Confidence 5 57777776666777888999999999888887655566889999999999999999999999876335688899998
Q ss_pred cCCCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHHH
Q psy10669 258 RKNKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAALK 319 (337)
Q Consensus 258 ~~~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~lr 319 (337)
...+.+..++.+.|.+.||.+.+. .++||+....+++..+.+++.. .++....+++++..+|
T Consensus 318 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~ 397 (405)
T 2vi8_A 318 RPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEAR 397 (405)
T ss_dssp GGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcccccccHHHHH
Confidence 765567788889998899998752 1699988776666777666543 2344434456688999
Q ss_pred HHHHHHH
Q psy10669 320 KEIEDYS 326 (337)
Q Consensus 320 ~~V~~~~ 326 (337)
++|.+|+
T Consensus 398 ~~~~~~~ 404 (405)
T 2vi8_A 398 QRVAALT 404 (405)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999987
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.95 E-value=1.9e-26 Score=222.31 Aligned_cols=313 Identities=40% Similarity=0.639 Sum_probs=246.5
Q ss_pred hhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669 12 AQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL 91 (337)
Q Consensus 12 ~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~ 91 (337)
...||++++.+.++..++...|.+.+++|+++|.|.+++...+.+.+..++++++++.|....+.+|..+++++++++|.
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 56799999999999999999999999999999999999998766556778888888888877778898888999999999
Q ss_pred CCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------------------c--cc
Q psy10669 92 DPEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------------------N--NA 122 (337)
Q Consensus 92 ~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------------------~--~a 122 (337)
++ ..+.++||+.|+..++.+++++ + +.
T Consensus 85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~ 160 (407)
T 2dkj_A 85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLAL 160 (407)
T ss_dssp SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHH
T ss_pred Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHh
Confidence 85 4577899999998888888643 0 00
Q ss_pred --cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCchhhh--
Q psy10669 123 --RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGEKILY-- 180 (337)
Q Consensus 123 --~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg~i~~-- 180 (337)
++++|++...++|+..|+++|.++|+++|+++++|++|+.|++. .++++. +.||+++.
T Consensus 161 ~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~ 240 (407)
T 2dkj_A 161 EHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSND 240 (407)
T ss_dssp HHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEEEESC
T ss_pred hcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEEEECC
Confidence 26888886667899999999999999999999999999986643 122232 24677764
Q ss_pred -hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 181 -~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~ 259 (337)
++.+.+.....++..+++++..++++..++..+.....++.++++.++.++|.+.|.+.|+++....+..+++++.+..
T Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 320 (407)
T 2dkj_A 241 PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRP 320 (407)
T ss_dssp HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGG
T ss_pred HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcc
Confidence 3667777666677788899988888888888765556688999999999999999999999987533578899999876
Q ss_pred CCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH---H---HhhCCCcHHHHHHHHHH
Q psy10669 260 NKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT---C---LHKNEDIVKKVAALKKE 321 (337)
Q Consensus 260 ~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~---~---~~~~~~~~~~~~~lr~~ 321 (337)
.+.+..++.+.|.+.||.+.+. ..+||+....|..+.+.+++.. . ++.. + +.+.++++
T Consensus 321 ~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~-~---~~~~~~~~ 396 (407)
T 2dkj_A 321 KGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE-G---PSEALREE 396 (407)
T ss_dssp GTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH-C---CCHHHHHH
T ss_pred cCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc-C---chHHHHHH
Confidence 5557788889998899998752 1589987766655665454432 1 2222 1 13559999
Q ss_pred HHHHHhcCCCC
Q psy10669 322 IEDYSNQFEMP 332 (337)
Q Consensus 322 V~~~~~~fp~p 332 (337)
|.+|.++||+|
T Consensus 397 ~~~~~~~~~~~ 407 (407)
T 2dkj_A 397 VRRLALAHPMP 407 (407)
T ss_dssp HHHHHHTSCCC
T ss_pred HHHHHHhcCCC
Confidence 99999999985
No 10
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.75 E-value=3.7e-17 Score=159.74 Aligned_cols=235 Identities=14% Similarity=0.166 Sum_probs=169.7
Q ss_pred eeeccCCC----CCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchh
Q psy10669 34 ELIASENF----TSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPA 108 (337)
Q Consensus 34 ~l~asen~----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~A 108 (337)
..++++|| .+|.|.+++...+ .+|+.+++++++..|. ....+++ +.+++++|.+. .+.++||+.|
T Consensus 67 id~~~~~~lg~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~G~~~~~~~l~----~~la~~~g~~~-----~i~~~sGs~a 136 (427)
T 2w8t_A 67 ILLGTYNYMGMTFDPDVIAAGKEAL-EKFGSGTCGSRMLNGTFHDHMEVE----QALRDFYGTTG-----AIVFSTGYMA 136 (427)
T ss_dssp EECSCCCTTCGGGCHHHHHHHHHHH-HHHCSCCCSCTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHH
T ss_pred EEEECcccccCCCCHHHHHHHHHHH-HHhCCCCcccccccCCcHHHHHHH----HHHHHHhCCCc-----eEEecCcHHH
Confidence 35667776 4799999998765 4566778888888886 4445666 57889999874 6889999999
Q ss_pred HHHHHHhhCCc------------------------------------c--c-c----cccEEEEcCcc--cccccChHHH
Q psy10669 109 NFAVCEKALPT------------------------------------N--N-A----RFDFLSSGTTC--YSRCLDYARF 143 (337)
Q Consensus 109 N~~v~~aLl~~------------------------------------~--~-a----~pklII~~~S~--~~~~~d~~~l 143 (337)
|..++.+++++ + + . ++++|++.... .+...|+++|
T Consensus 137 ~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l 216 (427)
T 2w8t_A 137 NLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEM 216 (427)
T ss_dssp HHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHH
T ss_pred HHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHH
Confidence 99999998764 0 0 1 35778876322 2466788899
Q ss_pred HHHhhhcCCeEEEeccccccccc--------------e---eeeecc-----CCchhhh--hHHHHHhhccCCCC-CCCC
Q psy10669 144 RQICDETDSIMFADMSHISGLIA--------------G---VKGVTK-----TGEKILY--DYEEKINNAVFPSL-QGGP 198 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~--------------g---~~~T~~-----~Gg~i~~--~l~~~i~~~~~p~~-~g~~ 198 (337)
.++|+++|++|++|++|+.|.++ . +++|.+ .||++++ ++.+.+.+...|.. .+++
T Consensus 217 ~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~ 296 (427)
T 2w8t_A 217 VAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASL 296 (427)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCCEEEEECCTTGGGGGGTCHHHHSSCCC
T ss_pred HHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCCCEEEeCHHHHHHHHHhcccccccCCC
Confidence 99999999999999999988764 1 134432 3787765 45555543322222 3567
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
++..++++..++..+. +.++.++++.++.++|.+.|.+.|+++......++++++.+... .+..++.+.|.+.||.+
T Consensus 297 ~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~Gi~v 373 (427)
T 2w8t_A 297 PPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQ-EQAAMMWQALLDGGLYV 373 (427)
T ss_dssp CHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSH-HHHHHHHHHHHHTTEEC
T ss_pred CHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCeEE
Confidence 7777777777777653 35788999999999999999999998873211567888888642 35667778888779998
Q ss_pred ccC
Q psy10669 279 NKN 281 (337)
Q Consensus 279 ~~~ 281 (337)
.+.
T Consensus 374 ~~~ 376 (427)
T 2w8t_A 374 NMA 376 (427)
T ss_dssp EEE
T ss_pred eee
Confidence 763
No 11
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.72 E-value=1.3e-16 Score=154.30 Aligned_cols=232 Identities=14% Similarity=0.116 Sum_probs=166.7
Q ss_pred eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
+.-++|+||+ +|.+.+++... ..+|+.++.+.+.+.|.... .+++ +++++++|.++ .+.++||+.
T Consensus 61 ~ld~~s~~~l~~~~~p~v~~a~~~~-l~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~ 130 (409)
T 3kki_A 61 DIILQSNDYLALANHPLIKARLAKS-LLEEQQSLFMSASFLQNDYDKPMIE----KRLAKFTGFDE-----CLLSQSGWN 130 (409)
T ss_dssp SEECCCSCTTCCTTCHHHHHHHHHH-HHSCCCCCCSBGGGGCSTTTSCHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred eEEeeccCccCCcCCHHHHHHHHHH-HHHcCCCCCccccccCCcHHHHHHH----HHHHHHhCCCe-----EEEecchHH
Confidence 4446788886 89999999876 45777777777777776433 5666 57789999885 688899999
Q ss_pred hHHHHHHhhCCc------------------------------------c--cc--cccEEEEcCccc--ccccChHHHHH
Q psy10669 108 ANFAVCEKALPT------------------------------------N--NA--RFDFLSSGTTCY--SRCLDYARFRQ 145 (337)
Q Consensus 108 AN~~v~~aLl~~------------------------------------~--~a--~pklII~~~S~~--~~~~d~~~l~e 145 (337)
||..++.+++++ + +. ++++|++..-.+ +...|+++|.+
T Consensus 131 a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~ 210 (409)
T 3kki_A 131 ANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVN 210 (409)
T ss_dssp HHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHH
Confidence 999999999765 1 01 268888874332 57888999999
Q ss_pred HhhhcCCeEEEeccccccccc-----------------eeeeec-c----CCchhhh--hHHHHHhhccCCCC-CCCCcH
Q psy10669 146 ICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TGEKILY--DYEEKINNAVFPSL-QGGPHN 200 (337)
Q Consensus 146 ia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~g~~~~ 200 (337)
+|+++|++|++|++|+.|.++ .+++|. | .||++++ ++.+.+.....+.. .+++++
T Consensus 211 la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (409)
T 3kki_A 211 ISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRAGAIWCNNEVNRCVPFISYPAIFSSTLLP 290 (409)
T ss_dssp HHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEESSSGGGTHHHHCHHHHHSBCCCH
T ss_pred HHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCceEEEECHHHHHHHHHhCcCccccCCCcH
Confidence 999999999999999987764 112333 2 2677765 34443333222222 234566
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
..++++..++..+. +.+++++++.++.++|.+.|.+.|+++. +..+++++.+.... +..++.+.|.+.||.+.+
T Consensus 291 ~~~aa~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~---~~~~~~~~~~~~~~-~~~~~~~~L~~~Gv~v~~ 364 (409)
T 3kki_A 291 YEAAGLETTLEIIE--SADNRRQHLDRMARKLRIGLSQLGLTIR---SESQIIGLETGDER-NTEKVRDYLESNGVFGSV 364 (409)
T ss_dssp HHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHTTTCCCC---CSSSEEEEEEESHH-HHHHHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCccC---CCCCEEEEEeCCHH-HHHHHHHHHHHCCceEee
Confidence 67777777776653 3478899999999999999999999876 36778888886533 456677778877999853
No 12
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.71 E-value=5.9e-16 Score=148.18 Aligned_cols=234 Identities=18% Similarity=0.209 Sum_probs=170.8
Q ss_pred eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
+.-++++|++ +|.+.+++...+. +|+.+++++++..|.... .+++ +.+++++|.+. .+.++||++
T Consensus 45 ~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~ 114 (399)
T 3tqx_A 45 VLNFCANNYLGLADHPALIKTAQTVVE-QYGFGMASVRFICGTQTIHKELE----KDISEFLGTDD-----TILYSSCFD 114 (399)
T ss_dssp EEECSSCCTTSCTTCHHHHHHHHHHHH-HHCSCCCSCCCCCCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCccccCchHHHHHH----HHHHHHHCCCc-----EEEECchHH
Confidence 4455566775 5999999987654 577778888888776443 5565 68889999874 688999999
Q ss_pred hHHHHHHhhCCc------------------------------------c--c-c------cccEEEEcCcc--cccccCh
Q psy10669 108 ANFAVCEKALPT------------------------------------N--N-A------RFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 108 AN~~v~~aLl~~------------------------------------~--~-a------~pklII~~~S~--~~~~~d~ 140 (337)
||..++.+++++ + + . ++++|++..-. .+...|+
T Consensus 115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l 194 (399)
T 3tqx_A 115 ANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADL 194 (399)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCH
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCH
Confidence 999888888764 0 0 0 36688876432 3567889
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec------cCCchhhh--hHHHHHhhccCCC-C
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT------KTGEKILY--DYEEKINNAVFPS-L 194 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~------~~Gg~i~~--~l~~~i~~~~~p~-~ 194 (337)
++|.++|+++|+++++|++|..|+++ .++++. ..||+++. ++.+.+.....+. .
T Consensus 195 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~~~~~~~~~~~ 274 (399)
T 3tqx_A 195 KSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLF 274 (399)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECHHHHHHHHHHCHHHHS
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCHHHHHHHHHhCcceec
Confidence 99999999999999999999877654 122232 24677765 4656555432222 2
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
.+++++..++++..++.... ...++.++++.++.++|.+.|.+.|+++.. .+.+++++.+... .+..++.+.|.+.
T Consensus 275 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~-~~~~~~~~~l~~~ 350 (399)
T 3tqx_A 275 SNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLVP--GNHPIIPVMLGDA-QLATNMADHLLQE 350 (399)
T ss_dssp SCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CSSSEEEEEEECH-HHHHHHHHHHHHT
T ss_pred cCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEeCCH-HHHHHHHHHHHHC
Confidence 45677777778777777653 346789999999999999999999998874 6677888887643 2567788888888
Q ss_pred Cceecc
Q psy10669 275 AIACNK 280 (337)
Q Consensus 275 gI~v~~ 280 (337)
||.+.+
T Consensus 351 gi~v~~ 356 (399)
T 3tqx_A 351 GIYVVG 356 (399)
T ss_dssp TEECCE
T ss_pred CCEEee
Confidence 999874
No 13
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.70 E-value=9.2e-17 Score=158.28 Aligned_cols=238 Identities=14% Similarity=0.067 Sum_probs=161.7
Q ss_pred hhcHHHH---HHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhcc----CCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669 13 QTDPELY---SLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKY----SEGLPGKRYYGGNQFIDEIEIVAQQRS 85 (337)
Q Consensus 13 ~~d~~~~---~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y----~~g~~g~r~~~G~~~~~~lE~~~~~~~ 85 (337)
..|+++. +-+++|.+||...+.+++++|+ +.|++++.+.....+ .+|++..|. ..+++| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-----g~~~Le----~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYNDI-----GRDSLD----RVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTCH-----HHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCch-----hHHHHH----HHH
Confidence 4578888 5567889999999999999998 899999988544332 223333332 256777 588
Q ss_pred HhhcCCCCCCCcceee--cCCCchhHHHHHHhhCCc-------c------------------------------------
Q psy10669 86 LKAFNLDPEQWGCNVQ--PYSGSPANFAVCEKALPT-------N------------------------------------ 120 (337)
Q Consensus 86 a~lfg~~~~~~~~~v~--~~Sgt~AN~~v~~aLl~~-------~------------------------------------ 120 (337)
+++||+++ +.++ ++||++||.+++.+++++ .
T Consensus 84 A~l~g~e~----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~ 159 (427)
T 3hvy_A 84 ANIFNTES----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKD 159 (427)
T ss_dssp HHHHTCSE----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBT
T ss_pred HHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCC
Confidence 99999987 3444 789999999999988643 0
Q ss_pred -----------c---ccccEEEEcCc----ccc--cccChHHHHHHhhh--cCCeEEEeccccccccc---------eee
Q psy10669 121 -----------N---ARFDFLSSGTT----CYS--RCLDYARFRQICDE--TDSIMFADMSHISGLIA---------GVK 169 (337)
Q Consensus 121 -----------~---a~pklII~~~S----~~~--~~~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~ 169 (337)
+ .+||+|+++.| .++ ...|+++|.++|++ +|++++||++|..|+.. .++
T Consensus 160 ~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~ 239 (427)
T 3hvy_A 160 GKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIA 239 (427)
T ss_dssp TBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEE
T ss_pred CCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcccCCeEEE
Confidence 0 12578888763 222 44677888899999 89999999999998843 234
Q ss_pred eecc---------CCchhhh--hHHHHHhhc-cCCCCC--CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q psy10669 170 GVTK---------TGEKILY--DYEEKINNA-VFPSLQ--GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE 235 (337)
Q Consensus 170 ~T~~---------~Gg~i~~--~l~~~i~~~-~~p~~~--g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~ 235 (337)
+|.+ .||+|++ ++.+++... ..|++. .++.+. .+.++ +..+ ...+.++++..+|++++++.
T Consensus 240 ~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~-~a~~~--~~gl--~~~~~r~~~~~~~a~~la~~ 314 (427)
T 3hvy_A 240 GSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFG-VMRSL--YEGL--FMAPHVTIEAVKGAVFCARI 314 (427)
T ss_dssp EETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT-CHHHH--HHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred ECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHH-HHHHH--HHhH--hHHHHHHHHHHHHHHHHHHH
Confidence 4432 3678776 577766653 345542 223222 12111 2222 12357899999999999999
Q ss_pred HHhCCCEEecCCCCCe-----EEEEEecCCCcchHHHHHHHhh
Q psy10669 236 MIKRGYHVVTGGTDVH-----LILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 236 L~~~G~~v~~~~t~~h-----~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
|.+.|++|+. +.+| ++++.+++.. ....+.+.|..
T Consensus 315 L~~~g~~V~p--~~~~~~~~li~~~~l~~~~-~~~~f~~~l~~ 354 (427)
T 3hvy_A 315 MELAGFDVLP--KYNDKRTDIIQAIKFNDEK-KLIDFIKGIQT 354 (427)
T ss_dssp HHHTTCEEES--CTTSCCSSSEEEEECSSHH-HHHHHHHHHHH
T ss_pred HHhCCCeecC--CCCCCCceEEEEEeCCCHH-HHHHHHHHhcc
Confidence 9999999965 3666 8888886432 34455555554
No 14
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.65 E-value=4.2e-15 Score=142.88 Aligned_cols=234 Identities=15% Similarity=0.195 Sum_probs=167.7
Q ss_pred eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
+.-++++|++ +|.|.+++...+ ++|+.++.++++..|. ....+++ +.+++++|.+. .+.++||+.
T Consensus 47 ~id~~~~~~~g~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGs~ 116 (401)
T 1fc4_A 47 VINFCANNYLGLANHPDLIAAAKAGM-DSHGFGMASVRFICGTQDSHKELE----QKLAAFLGMED-----AILYSSCFD 116 (401)
T ss_dssp EEECCCSCTTSCTTCHHHHHHHHHHH-HHHCSCCCSCHHHHCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEeeccCcccccCCHHHHHHHHHHH-HHhCCCCCCCCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEeCChHH
Confidence 4345555766 799999998764 4666666666766554 3334554 68889999873 688899999
Q ss_pred hHHHHHHhhCCc------------------------------------c--cc-------cccEEEEcCc--ccccccCh
Q psy10669 108 ANFAVCEKALPT------------------------------------N--NA-------RFDFLSSGTT--CYSRCLDY 140 (337)
Q Consensus 108 AN~~v~~aLl~~------------------------------------~--~a-------~pklII~~~S--~~~~~~d~ 140 (337)
|+..++.+++++ + +. ++++|++..- ..+...|+
T Consensus 117 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~ 196 (401)
T 1fc4_A 117 ANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANL 196 (401)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCH
T ss_pred HHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCH
Confidence 998888888754 0 01 3567777532 24678889
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c-----CCchhhh--hHHHHHhhccCCC-C
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K-----TGEKILY--DYEEKINNAVFPS-L 194 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~-~ 194 (337)
++|.++|+++|+++++|++|..|++. .+++|. | .||+++. ++.+.+.....|. .
T Consensus 197 ~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~~~~~~l~~~~~~~~~ 276 (401)
T 1fc4_A 197 KGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLF 276 (401)
T ss_dssp HHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCHHHHHHHHHhCcCcee
Confidence 99999999999999999999877752 122233 2 3677765 5666665432222 1
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
.+++++...+++..++..+. +.++.++++.++.++|.+.|.+.|+++.. +..+++++.+.. +.+..++.+.|.+.
T Consensus 277 ~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~-~~~~~~l~~~l~~~ 351 (401)
T 1fc4_A 277 SNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAAGFTLAG--ADHAIIPVMLGD-AVVAQKFARELQKE 351 (401)
T ss_dssp SCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTTCCBCC--SSSSEEEEEEEC-HHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccC--CCCCEEEEEcCC-hHHHHHHHHHHHHC
Confidence 44677888888888877763 25788999999999999999999998874 677888888853 23567778888888
Q ss_pred CceeccC
Q psy10669 275 AIACNKN 281 (337)
Q Consensus 275 gI~v~~~ 281 (337)
||.+.+.
T Consensus 352 gi~v~~~ 358 (401)
T 1fc4_A 352 GIYVTGF 358 (401)
T ss_dssp TEECCEE
T ss_pred CcEEeee
Confidence 9998753
No 15
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.62 E-value=1.6e-14 Score=138.04 Aligned_cols=236 Identities=11% Similarity=0.095 Sum_probs=164.3
Q ss_pred ceeeeccCC---CCCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 32 GIELIASEN---FTSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 32 ~i~l~asen---~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
.|.+.+.+| ..+|.+++++...+. +++.+++++++..|. ....+++ +.+++++|.+. .+.++||+.
T Consensus 41 ~id~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~ 110 (384)
T 1bs0_A 41 YLNFSSNDYLGLSHHPQIIRAWQQGAE-QFGIGSGGSGHVSGYSVVHQALE----EELAEWLGYSR-----ALLFISGFA 110 (384)
T ss_dssp EEECSCCCTTSGGGCHHHHHHHHHHHH-HHCSCCCSBTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEeeccCccCCCCCHHHHHHHHHHHH-HhCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHH
Confidence 455555554 368999999987654 455556666665454 3334444 68889999863 688899999
Q ss_pred hHHHHHHhhCCc------------------------------------c--ccc----ccEEEEcCcc--cccccChHHH
Q psy10669 108 ANFAVCEKALPT------------------------------------N--NAR----FDFLSSGTTC--YSRCLDYARF 143 (337)
Q Consensus 108 AN~~v~~aLl~~------------------------------------~--~a~----pklII~~~S~--~~~~~d~~~l 143 (337)
|+..++.+++++ + +.+ +++|++.... .+...|+++|
T Consensus 111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i 190 (384)
T 1bs0_A 111 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEI 190 (384)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHH
T ss_pred HHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHH
Confidence 988888988764 0 011 3566654222 4688899999
Q ss_pred HHHhhhcCCeEEEeccccccccc---------------eeeeec-c----CCchhhh--hHHHHHhhccCCCCC-CCCcH
Q psy10669 144 RQICDETDSIMFADMSHISGLIA---------------GVKGVT-K----TGEKILY--DYEEKINNAVFPSLQ-GGPHN 200 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~~-g~~~~ 200 (337)
.++|+++|+++++|++|..|.++ .+++|. | .||+++. ++.+.+.....+... +++++
T Consensus 191 ~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~ 270 (384)
T 1bs0_A 191 QQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPP 270 (384)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCCEEEEECHHHHHHHHHHCHHHHSSBCCCH
T ss_pred HHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccCcEEEeCHHHHHHHHHhchhhhcCCCCCH
Confidence 99999999999999999887642 123333 2 4788765 466655543212222 25777
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
...+++..++..+.+...+++++++.++.++|.+.|.+.|+++.. ..++++++.+.. +.+..++.+.|.+.||.+.+
T Consensus 271 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~ 347 (384)
T 1bs0_A 271 AQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLAD--SCSAIQPLIVGD-NSRALQLAEKLRQQGCWVTA 347 (384)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECS--CCSSBCCEEEES-HHHHHHHHHHHHHTTEECCE
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCEEEEEeCC-HHHHHHHHHHHHHCCcEEEe
Confidence 777777777776642245688999999999999999999998864 566777787753 33567788888878999875
No 16
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.61 E-value=3.2e-15 Score=147.29 Aligned_cols=244 Identities=16% Similarity=0.074 Sum_probs=159.3
Q ss_pred hhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhh-hccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669 13 QTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQ-NKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL 91 (337)
Q Consensus 13 ~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~-~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~ 91 (337)
+...++++-+++|..+|...+..++++|. +.|++++..... ..+..+ ...|.-+-...+++| ++++++||+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~--~~gy~y~~~~~~~Le----~~lA~l~g~ 88 (427)
T 3i16_A 17 DRVLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTN--SSGYGYGDIGRDSLD----AVYARVFNT 88 (427)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCC--CCTTCTTCHHHHHHH----HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCC--CCCCCCCHHHHHHHH----HHHHHHhCC
Confidence 44566777788899999999999999998 889999975321 111111 111111222356777 588999999
Q ss_pred CCCCCcceee--cCCCchhHHHHHHhhCCc-------c------------------------------------------
Q psy10669 92 DPEQWGCNVQ--PYSGSPANFAVCEKALPT-------N------------------------------------------ 120 (337)
Q Consensus 92 ~~~~~~~~v~--~~Sgt~AN~~v~~aLl~~-------~------------------------------------------ 120 (337)
++ +.++ ++||++||..++.+++++ .
T Consensus 89 e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~ 164 (427)
T 3i16_A 89 ES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNL 164 (427)
T ss_dssp SE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCH
T ss_pred cc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCH
Confidence 86 3344 789999999999887533 0
Q ss_pred ------c---ccccEEEEcCc---ccc---cccChHHHHHHhhh--cCCeEEEeccccccccc---------eeeeecc-
Q psy10669 121 ------N---ARFDFLSSGTT---CYS---RCLDYARFRQICDE--TDSIMFADMSHISGLIA---------GVKGVTK- 173 (337)
Q Consensus 121 ------~---a~pklII~~~S---~~~---~~~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~~T~~- 173 (337)
+ .+||+|++..| .+. ...|+++|.++|++ +|++++||++|..|+.. .+++|.+
T Consensus 165 e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK 244 (427)
T 3i16_A 165 EEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIK 244 (427)
T ss_dssp HHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTS
T ss_pred HHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcc
Confidence 0 12578888652 222 44567778889999 99999999999998732 2344432
Q ss_pred --------CCchhhh--hHHHHHhhcc-CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669 174 --------TGEKILY--DYEEKINNAV-FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH 242 (337)
Q Consensus 174 --------~Gg~i~~--~l~~~i~~~~-~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~ 242 (337)
.||++++ ++.+++.... .|++..... +...+...++.-+ ...+.++++..+|++++++.|.+.|++
T Consensus 245 ~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~-~~~~~a~~~l~gl--~~~~~r~~~~~~~a~~la~~L~~~g~~ 321 (427)
T 3i16_A 245 NIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECG-STFGVVRSMYQGL--FLAPHISMEALKGAILCSRIMELAGFE 321 (427)
T ss_dssp GGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCC-CCTTCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred cCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCC-ccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 3677776 5777666532 333321111 1011111122222 234688999999999999999999999
Q ss_pred EecCCCCCe-----EEEEEecCCCcchHHHHHHHhhc
Q psy10669 243 VVTGGTDVH-----LILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 243 v~~~~t~~h-----~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
|+. +.+| +++|.+++.. ....+.+.|...
T Consensus 322 V~p--~~~~~~~~~i~~i~l~~~~-~~~~f~~~l~~~ 355 (427)
T 3i16_A 322 VMP--KYDEKRSDIIQSIKFNDKD-KLIEFCKGIQTG 355 (427)
T ss_dssp EES--CTTSCCSSSCEEEECSSHH-HHHHHHHHHHHT
T ss_pred ecC--CCCCCCccEEEEEEECCHH-HHHHHHHHHhhc
Confidence 965 3777 9999887433 455666667654
No 17
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.60 E-value=2.9e-13 Score=130.03 Aligned_cols=242 Identities=12% Similarity=0.018 Sum_probs=160.2
Q ss_pred ceeeeccCC-CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC-CCCCCcceeecCCC-chh
Q psy10669 32 GIELIASEN-FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL-DPEQWGCNVQPYSG-SPA 108 (337)
Q Consensus 32 ~i~l~asen-~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~-~~~~~~~~v~~~Sg-t~A 108 (337)
.+.|-..++ ..||.|.+++...+.+. .+++++..+.-..........+++.+++++|. +. .++.+++| +.|
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~g~t~a 102 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYEND--NANVHRGAHQLSVRATDAYEAVRNKVAKFINARSP----REIVYTRNATEA 102 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHT--CCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCG----GGEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhc--cCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCC----CeEEEcCChHHH
Confidence 355543333 45899999998765442 23333221111111122333455789999998 33 24666555 789
Q ss_pred HHHHHHhh----CCc---------------------------------------------c--cc-cccEEEEcCcc--c
Q psy10669 109 NFAVCEKA----LPT---------------------------------------------N--NA-RFDFLSSGTTC--Y 134 (337)
Q Consensus 109 N~~v~~aL----l~~---------------------------------------------~--~a-~pklII~~~S~--~ 134 (337)
+..++.++ +++ + +. ++++|++..-. .
T Consensus 103 ~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt 182 (420)
T 1t3i_A 103 INLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTL 182 (420)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTT
T ss_pred HHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccc
Confidence 98888888 654 0 00 26777776332 4
Q ss_pred ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccCCC----
Q psy10669 135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVFPS---- 193 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~p~---- 193 (337)
+...|+++|.++|+++|+++++|++|+.|... .++++. | .| |+++. ++.+.+.+...++
T Consensus 183 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 262 (420)
T 1t3i_A 183 GCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIA 262 (420)
T ss_dssp CBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTSEE
T ss_pred cCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCccc
Confidence 68889999999999999999999999988764 133333 2 23 55554 4666665443221
Q ss_pred ----------------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC----CCCeE
Q psy10669 194 ----------------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGG----TDVHL 252 (337)
Q Consensus 194 ----------------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~----t~~h~ 252 (337)
..|+++....+++..++..+.+...++.+++..++++++.+.|.+. |+++.... ....+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~ 342 (420)
T 1t3i_A 263 EVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAAL 342 (420)
T ss_dssp EECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSE
T ss_pred cccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCE
Confidence 1467888888888777777644345788999999999999999986 99887632 13667
Q ss_pred EEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 253 ILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
+.+.+. +.+..++.+.|.+.||.+.+.
T Consensus 343 ~~~~~~--~~~~~~~~~~l~~~gi~v~~~ 369 (420)
T 1t3i_A 343 ASFNVA--GLHASDVATMVDQDGIAIRSG 369 (420)
T ss_dssp EEEEET--TBCHHHHHHHHHTTTEECBCS
T ss_pred EEEEEC--CCCHHHHHHHHHHCCeEEeec
Confidence 777765 346778888999899998763
No 18
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.60 E-value=1.7e-13 Score=130.94 Aligned_cols=241 Identities=10% Similarity=-0.015 Sum_probs=163.0
Q ss_pred ceeeecc-CCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC-CCCCCcceeecCCC-chh
Q psy10669 32 GIELIAS-ENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL-DPEQWGCNVQPYSG-SPA 108 (337)
Q Consensus 32 ~i~l~as-en~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~-~~~~~~~~v~~~Sg-t~A 108 (337)
.+.|-.. ....+|.|.+++...+.+. .+++++..+.......+....+++.+++++|. +. .+|.+++| +.|
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~g~t~a 97 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHG--YAAVHRGIHTLSAQATEKMENVRKRASLFINARSA----EELVFVRGTTEG 97 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHT--CCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCG----GGEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhh--cCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCC----CeEEEeCChhHH
Confidence 3444433 3356999999998775542 23444322221112233344456799999998 33 25777666 689
Q ss_pred HHHHHHhh----CCc-------------------------------------------cc----c-cccEEEEcCcc--c
Q psy10669 109 NFAVCEKA----LPT-------------------------------------------NN----A-RFDFLSSGTTC--Y 134 (337)
Q Consensus 109 N~~v~~aL----l~~-------------------------------------------~~----a-~pklII~~~S~--~ 134 (337)
+..++.++ +++ .+ . ++++|++..-. .
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt 177 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVL 177 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTT
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccc
Confidence 98888888 654 00 0 26777776322 3
Q ss_pred ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccCC-----
Q psy10669 135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVFP----- 192 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~p----- 192 (337)
+...|+++|.++|+++|+++++|++|..|... .++++. | .| |+++. ++.+.+.+...+
T Consensus 178 G~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~ 257 (406)
T 1kmj_A 178 GTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIA 257 (406)
T ss_dssp CCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTTSEE
T ss_pred cCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCCcee
Confidence 68889999999999999999999999988764 133333 2 35 66655 566665543321
Q ss_pred ----------------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEE
Q psy10669 193 ----------------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILI 255 (337)
Q Consensus 193 ----------------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V 255 (337)
...|++++..++++..++..+.+...++.++++.++.++|.+.|.+. |+++........++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 337 (406)
T 1kmj_A 258 TVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF 337 (406)
T ss_dssp EEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE
T ss_pred ecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE
Confidence 11467888888888788777654455788889999999999999986 8988762125677777
Q ss_pred EecCCCcchHHHHHHHhhcCceecc
Q psy10669 256 DLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 256 ~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.+. +.+..++.+.|.+.||.+.+
T Consensus 338 ~~~--~~~~~~~~~~l~~~gi~v~~ 360 (406)
T 1kmj_A 338 NLG--KHHAYDVGSFLDNYGIAVRT 360 (406)
T ss_dssp EET--TCCHHHHHHHHHHTTEECEE
T ss_pred EEC--CCCHHHHHHHHhhCCcEEEe
Confidence 764 44677888899889999864
No 19
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.59 E-value=1.3e-13 Score=132.84 Aligned_cols=245 Identities=16% Similarity=0.078 Sum_probs=165.6
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCc---CcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCC-
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR---YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSG- 105 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r---~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sg- 105 (337)
+.+++.|.--.++|.|++++...+.+-+ |++.+- .+.+. ...++-..+|++++++||++++ ..|.| ++|
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~-~~~~~~~~~r~~la~ll~~~~~---~~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTK-VFEEVHFGAQEKAKKLYELNDD---YEVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSH-HHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCH-HHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCcH
Confidence 5688999999999999999998766543 443332 23332 3455666789999999999643 35777 666
Q ss_pred chhHHHHHHhhCCc----------------------------------c---------cc-cccEEEEcCccc--ccccC
Q psy10669 106 SPANFAVCEKALPT----------------------------------N---------NA-RFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 106 t~AN~~v~~aLl~~----------------------------------~---------~a-~pklII~~~S~~--~~~~d 139 (337)
|.+|..++.++++. . +. ++++|.+.+... +...|
T Consensus 79 T~a~n~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~~l~~~t~lv~~~~~e~~tG~~~~ 158 (361)
T 3m5u_A 79 SLQFAMIPMNLALNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQ 158 (361)
T ss_dssp HHHHHHHHHHHCCSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCCCCCTTSSEEEEESEETTTTEECS
T ss_pred HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChhhcCCCCCEEEEeCCCCCcceeCC
Confidence 78877777777632 1 00 246666664443 55444
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc-------eeeeec-----cCC-chhh-h-hHHHHHhhcc------------CC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA-------GVKGVT-----KTG-EKIL-Y-DYEEKINNAV------------FP 192 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~-----~~G-g~i~-~-~l~~~i~~~~------------~p 192 (337)
+|+++ |++++||++|++|.+. .+.++. |+| |++. . ++.+.+.+.. ..
T Consensus 159 -----~i~~~-~~~~~vD~~q~~g~~~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 232 (361)
T 3m5u_A 159 -----NYPKT-KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQ 232 (361)
T ss_dssp -----SCCCC-SSCEEEECGGGTTSSCCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTT
T ss_pred -----ccccc-CCEEEEEcccccCCCCCCcccCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcC
Confidence 26665 9999999999999987 133333 345 4443 2 4444433210 12
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-C-EEecCC--CCCeEEEEEecC-CCcchHH
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-Y-HVVTGG--TDVHLILIDLRK-NKLTGSK 266 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~-~v~~~~--t~~h~v~V~~~~-~~~~~~~ 266 (337)
...+||+.+.+.++..|+.++.+. ..+...++..+++++|.+.|.+.| + .+.... ...+++.+.+.. .+++ .+
T Consensus 233 ~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~-~~ 311 (361)
T 3m5u_A 233 SLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLE-PL 311 (361)
T ss_dssp TCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHH-HH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhhh-HH
Confidence 234799999999999999999865 578999999999999999999976 5 554321 123466666654 3445 45
Q ss_pred HHHHHhhcCceeccCc----ccchhh
Q psy10669 267 VELVLEEIAIACNKNT----GISLAA 288 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~~----girig~ 288 (337)
+...|++.||.+..-. ++|++.
T Consensus 312 ~~~~L~~~gI~~~~g~~~~g~iRiS~ 337 (361)
T 3m5u_A 312 FVKEAEEAGMIGLKGHRILGGIRASI 337 (361)
T ss_dssp HHHHHHHTTEECCBCCTTTCSEEEEC
T ss_pred HHHHHHHCCCEEecCCCccCeEEEEc
Confidence 6688888999986542 788874
No 20
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.59 E-value=4.7e-14 Score=133.30 Aligned_cols=231 Identities=13% Similarity=0.083 Sum_probs=157.2
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
++....+|.|.+++...+.+.+ ++|+.. |.......++...+++.+++++|+++ .++.+++| +.|+..++.+
T Consensus 7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~~----~~i~~~~g~~~a~~~~~~~ 79 (382)
T 4hvk_A 7 TSAKPVDERILEAMLPYMTESF--GNPSSV-HSYGFKAREAVQEAREKVAKLVNGGG----GTVVFTSGATEANNLAIIG 79 (382)
T ss_dssp TTCCCCCHHHHHHHHHHHHTSC--CCTTCS-SHHHHHHHHHHHHHHHHHHHHTTCTT----EEEEEESSHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhhc--CCCccc-chHHHHHHHHHHHHHHHHHHHcCCCc----CeEEEECCchHHHHHHHHH
Confidence 4556779999999988766533 555553 32223334455556689999999976 35777666 6788888888
Q ss_pred hC----Cc------------------------------------------cc----c-cccEEEEcCcc--cccccChHH
Q psy10669 116 AL----PT------------------------------------------NN----A-RFDFLSSGTTC--YSRCLDYAR 142 (337)
Q Consensus 116 Ll----~~------------------------------------------~~----a-~pklII~~~S~--~~~~~d~~~ 142 (337)
++ ++ .+ . ++++|++..-. .+...|+++
T Consensus 80 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~ 159 (382)
T 4hvk_A 80 YAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEE 159 (382)
T ss_dssp HHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHH
T ss_pred hhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHH
Confidence 76 43 00 0 26777776322 468889999
Q ss_pred HHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccCC------CCCCCCc
Q psy10669 143 FRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVFP------SLQGGPH 199 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~p------~~~g~~~ 199 (337)
|.++|+++|+ +++|++|..|... .++++. | .| |+++. +. .+.+..+. ...++++
T Consensus 160 i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (382)
T 4hvk_A 160 ISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSEN 236 (382)
T ss_dssp HHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCC
T ss_pred HHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--CcCcccccCCCcCccccCCcC
Confidence 9999999999 9999999988764 133333 2 22 33332 22 22222211 1156788
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC--CCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT--DVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
.+.++++..++..+. ...++.+++..++.++|.+.|.+. |+++..... -.+++.+.+. +.+..++.+.|.+.||
T Consensus 237 ~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi 313 (382)
T 4hvk_A 237 VPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--YIEGESIVLSLDMAGI 313 (382)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--TCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC--CCCHHHHHHHHHHCCE
Confidence 899999988887653 456888999999999999999984 888875211 1345555553 4578888899998999
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+..
T Consensus 314 ~v~~ 317 (382)
T 4hvk_A 314 QAST 317 (382)
T ss_dssp BCBC
T ss_pred EEee
Confidence 9875
No 21
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.59 E-value=2.7e-13 Score=127.54 Aligned_cols=246 Identities=12% Similarity=0.086 Sum_probs=168.8
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPAN 109 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN 109 (337)
+.+++.++-..++|.|++++...+.+.. .+. +.+ + ....++...+++.+++++|.+.++ .+.++ ||+.|+
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~-~~~-~~~---~-~~~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~al 74 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKI-GVI-SHR---S-KKFEEVYKTASDNLKTLLELPSNY---EVLFLASATEIW 74 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTT-TTS-CTT---S-HHHHHHHHHHHHHHHHHTTCCTTE---EEEEESCHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCc-cCc-CCC---C-HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCchHHH
Confidence 4688899999999999988876654321 111 111 1 122345555668999999986432 35554 458899
Q ss_pred HHHHHhhCCc---------------------------------------cc-c--cccEEEEcCc--ccccccChHHHHH
Q psy10669 110 FAVCEKALPT---------------------------------------NN-A--RFDFLSSGTT--CYSRCLDYARFRQ 145 (337)
Q Consensus 110 ~~v~~aLl~~---------------------------------------~~-a--~pklII~~~S--~~~~~~d~~~l~e 145 (337)
..++.+++++ .+ . ++|+|++..- ..+...|+++|.+
T Consensus 75 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~ 154 (362)
T 3ffr_A 75 ERIIQNCVEKKSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADITVPADAEIICLTHNETSSGVSMPVEDINT 154 (362)
T ss_dssp HHHHHHHCSSEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCCCCTTCCEEEEESEETTTTEECCHHHHTT
T ss_pred HHHHHhccCCcEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHhccCCccEEEEEcCCCCcceeCCHHHHHH
Confidence 8888988754 11 1 2687777632 3468899999999
Q ss_pred Hhhhc-CCeEEEeccccccccc-------eeeeec-c-----CC-chhhh--hHHHHHhhccC-----------------
Q psy10669 146 ICDET-DSIMFADMSHISGLIA-------GVKGVT-K-----TG-EKILY--DYEEKINNAVF----------------- 191 (337)
Q Consensus 146 ia~~~-ga~l~vD~AH~~Gli~-------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~~----------------- 191 (337)
+|+++ |+++++|++|..|... .++++. | .| |+++. ++.+++.+...
T Consensus 155 la~~~p~~~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 234 (362)
T 3ffr_A 155 FRDKNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEK 234 (362)
T ss_dssp SGGGSTTSEEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHH
T ss_pred HHHhCCCCEEEEecccccCCcccChhHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHH
Confidence 99999 9999999999988754 223333 2 23 45433 45444433211
Q ss_pred ---CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-C--CCCCeEEEEEecCCCcch
Q psy10669 192 ---PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-G--GTDVHLILIDLRKNKLTG 264 (337)
Q Consensus 192 ---p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~--~t~~h~v~V~~~~~~~~~ 264 (337)
....++++...++++..++..+.....++.+++..++++++.+.|.+. |+++.. . ...++++++.+.. +.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~ 311 (362)
T 3ffr_A 235 ARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM---LP 311 (362)
T ss_dssp HTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS---CH
T ss_pred hhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC---CH
Confidence 122578889999999888887654446889999999999999999997 998875 1 1235566676654 67
Q ss_pred HHHHHHHhhcCceeccCc------ccchhh
Q psy10669 265 SKVELVLEEIAIACNKNT------GISLAA 288 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~------girig~ 288 (337)
.++.+.|.+.||.+.+.. .|||+.
T Consensus 312 ~~~~~~l~~~gi~~~~g~~~~~~~~iRis~ 341 (362)
T 3ffr_A 312 GEINKILEPFDMAVGAGYGSKKETQIRIAN 341 (362)
T ss_dssp HHHHHHHGGGTEEEEECSGGGTTTEEEEEC
T ss_pred HHHHHHHHHCCeEEecCccccCCCEEEEEC
Confidence 888888888899988532 577764
No 22
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.58 E-value=6.1e-14 Score=134.89 Aligned_cols=232 Identities=13% Similarity=0.130 Sum_probs=156.1
Q ss_pred eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669 35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109 (337)
Q Consensus 35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN 109 (337)
.+.+++++ +|.|.+++...+. ++..+..+.+...|. ....+++ +++++++|.+. ++.++||+.+|
T Consensus 50 ~~~~~~~~~~~~~p~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sG~~a~ 119 (401)
T 2bwn_A 50 VWCGNDYLGMGQHPVVLAAMHEALE-AVGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKEA-----ALVFSSAYNAN 119 (401)
T ss_dssp ECSCSCTTSGGGCHHHHHHHHHHHH-HHCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHH
T ss_pred EeeCCCcccCCCCHHHHHHHHHHHH-HcCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECCcHHHH
Confidence 34555553 7899999987654 444333333332233 3345554 68899999753 68899998899
Q ss_pred HHHHHhhC--Cc--------------------------------------cc-----ccccEEEEcCcc--cccccChHH
Q psy10669 110 FAVCEKAL--PT--------------------------------------NN-----ARFDFLSSGTTC--YSRCLDYAR 142 (337)
Q Consensus 110 ~~v~~aLl--~~--------------------------------------~~-----a~pklII~~~S~--~~~~~d~~~ 142 (337)
.+++.++. .+ .+ .++++|++..-. .+...|+++
T Consensus 120 ~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 199 (401)
T 2bwn_A 120 DATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKE 199 (401)
T ss_dssp HHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHH
T ss_pred HHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHH
Confidence 88877653 11 01 125777776333 357889999
Q ss_pred HHHHhhhcCCeEEEeccccccccc--e---------------eeeec-c----CCchhhh--hHHHHHhhccCC--CCCC
Q psy10669 143 FRQICDETDSIMFADMSHISGLIA--G---------------VKGVT-K----TGEKILY--DYEEKINNAVFP--SLQG 196 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~Gli~--g---------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p--~~~g 196 (337)
|.++|+++|+++++|++|+.|+++ | +.+|. | .||+++. ++.+.+.....+ ...+
T Consensus 200 i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~ 279 (401)
T 2bwn_A 200 ICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTS 279 (401)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBC
T ss_pred HHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCCCEEecCHHHHHHHHHhCcCceecCC
Confidence 999999999999999999987764 1 12232 2 3787765 455554432111 1133
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcC
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIA 275 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~g 275 (337)
+ ++..++++..++..+.+..+++.++++.++.++|.+.|.+.|+++.. .+++++++.+.. +.+..++.+.| ++.|
T Consensus 280 ~-~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~-~~~~~~~~~~L~~~~g 355 (401)
T 2bwn_A 280 L-PPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIID--HGSHIVPVVIGD-PVHTKAVSDMLLSDYG 355 (401)
T ss_dssp C-CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CSSSCEEEECCC-HHHHHHHHHHHHHHHC
T ss_pred C-CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccC--CCCCeEEEEeCC-hHHHHHHHHHHHhcCC
Confidence 3 34777777788877654345788999999999999999988988875 455688887753 34567777777 4789
Q ss_pred ceecc
Q psy10669 276 IACNK 280 (337)
Q Consensus 276 I~v~~ 280 (337)
|.+.+
T Consensus 356 i~v~~ 360 (401)
T 2bwn_A 356 VYVQP 360 (401)
T ss_dssp EECCE
T ss_pred EEEee
Confidence 99864
No 23
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.57 E-value=5.7e-13 Score=125.01 Aligned_cols=239 Identities=13% Similarity=0.014 Sum_probs=164.2
Q ss_pred eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHH
Q psy10669 33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFA 111 (337)
Q Consensus 33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~ 111 (337)
+++.|.-..++|.|++++...+.. .+++ ...+....+++.+++++|.++ .++.++ ||+.|+..
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~--------~~~~----~~~~~~~~l~~~la~~~g~~~----~~i~~~~g~t~a~~~ 66 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLH--------HRTE----AAREVFLKARGLLREAFRTEG----EVLILTGSGTLAMEA 66 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCC--------TTSH----HHHHHHHHHHHHHHHHHTCSS----EEEEEESCHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCC--------ccCH----HHHHHHHHHHHHHHHHhCCCC----ceEEEcCchHHHHHH
Confidence 677888888999999999765321 1111 122333445678899999874 256665 55889988
Q ss_pred HHHhhCCc-----------------------------------------cc--ccccEEEEcCcc--cccccChHHHHHH
Q psy10669 112 VCEKALPT-----------------------------------------NN--ARFDFLSSGTTC--YSRCLDYARFRQI 146 (337)
Q Consensus 112 v~~aLl~~-----------------------------------------~~--a~pklII~~~S~--~~~~~d~~~l~ei 146 (337)
++.+++++ .+ .++++|++..-. .+...|+++|.++
T Consensus 67 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l 146 (352)
T 1iug_A 67 LVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLLVHSETSTGALADLPALARA 146 (352)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEEESEETTTTEECCHHHHHHH
T ss_pred HHHhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhccCCcEEEEEEecCCcceecCHHHHHHH
Confidence 88998654 11 126777776333 3688899999999
Q ss_pred hhhc--CCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHH---------H----hhccCCC
Q psy10669 147 CDET--DSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEK---------I----NNAVFPS 193 (337)
Q Consensus 147 a~~~--ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~---------i----~~~~~p~ 193 (337)
|+++ |+++++|++|..|... .++++.+| | |+++. ++.+. + .......
T Consensus 147 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T 1iug_A 147 FKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGE 226 (352)
T ss_dssp HHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTC
T ss_pred HHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCC
Confidence 9999 9999999999877653 13334332 4 55543 33322 1 1110112
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
..++++.+.++++..++..+.+ .+++.++++.++.++|.+.|.+.|+++.......+++++.+.. +.+..++.+.|.+
T Consensus 227 ~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 304 (352)
T 1iug_A 227 SAWTPAINLVLAVAAVLEEVLP-RLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPE-GVPYARVKEAFAQ 304 (352)
T ss_dssp CSSCCCHHHHHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCT-TCCHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCC-CCCHHHHHHHHHH
Confidence 2568888999998888887643 4788999999999999999999999887521246677787753 4577888888888
Q ss_pred cCceeccCc------ccchhhh
Q psy10669 274 IAIACNKNT------GISLAAE 289 (337)
Q Consensus 274 ~gI~v~~~~------girig~~ 289 (337)
.||.+.+.. .+||+..
T Consensus 305 ~gi~v~~~~~~~~~~~iRi~~~ 326 (352)
T 1iug_A 305 RGAVIAGGQGPLKGKVFRLSLM 326 (352)
T ss_dssp TTEECEECCGGGTTTEEEECCC
T ss_pred CCEEEEeCCCccCCCEEEEEcc
Confidence 899987532 5777654
No 24
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.57 E-value=5.3e-14 Score=136.38 Aligned_cols=240 Identities=13% Similarity=0.049 Sum_probs=156.1
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCc---CcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CC-CchhHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKR---YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YS-GSPANF 110 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r---~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~S-gt~AN~ 110 (337)
.|+--.+||.|++++...+.+.| |++.+- .+.+. ...++-..+|++++++||++++ ..|.| ++ ||.++.
T Consensus 18 ~at~~~~p~~Vl~a~~~~~~~~~--~n~~s~~~~~hr~~-~~~~~~~~ar~~la~ll~~~~~---~evif~t~~~T~a~n 91 (377)
T 3e77_A 18 LYFQSMLPHSVLLEIQKELLDYK--GVGISVLEMSHRSS-DFAKIINNTENLVRELLAVPDN---YKVIFLQGGGCGQFS 91 (377)
T ss_dssp EECSCCCCHHHHHHHHHTSSSGG--GSSSCTTTCCTTSH-HHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHhcc--cCCccccccCCCCH-HHHHHHHHHHHHHHHHhCCCCC---CeEEEEcCchHHHHH
Confidence 45555679999999998876644 333221 23333 3455666789999999999753 25777 44 488876
Q ss_pred HHHHhhCC----c-----------------------------------------ccc---cccEEEEcCcc--cccccCh
Q psy10669 111 AVCEKALP----T-----------------------------------------NNA---RFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 111 ~v~~aLl~----~-----------------------------------------~~a---~pklII~~~S~--~~~~~d~ 140 (337)
+++.+++. + +.+ ++++|.+.+.. .+...|+
T Consensus 92 ~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi 171 (377)
T 3e77_A 92 AVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF 171 (377)
T ss_dssp HHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS
T ss_pred HHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh
Confidence 66777752 1 111 15777776444 4777887
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc------e-eeee-c----cCC-chhh-h-hHHHHHhh-----------ccCCCC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA------G-VKGV-T----KTG-EKIL-Y-DYEEKINN-----------AVFPSL 194 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~------g-~~~T-~----~~G-g~i~-~-~l~~~i~~-----------~~~p~~ 194 (337)
||+++|++++||++|++|.+. + +.++ + |+| |++. . ++.+++.+ .-.+..
T Consensus 172 -----i~~~~~~~~~vD~~q~~g~~~id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~ 246 (377)
T 3e77_A 172 -----IPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSL 246 (377)
T ss_dssp -----CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTC
T ss_pred -----hhccCCCEEEEEcccccCCCCCchhhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCC
Confidence 688999999999999999987 2 2333 2 344 4432 2 22111110 001234
Q ss_pred CCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCC--Ce-EEEEEecCCCcch-----
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTD--VH-LILIDLRKNKLTG----- 264 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~--~h-~v~V~~~~~~~~~----- 264 (337)
.+||+.+.++++..+++++.+. ..+...++..+++++|.+.|.+. |+.+.....+ ++ ++.+.+. ++++
T Consensus 247 ~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~--~~~~~~~~~ 324 (377)
T 3e77_A 247 YNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIG--NAKGDDALE 324 (377)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEES--STTCCHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcC--CCCCchhHH
Confidence 6899999999999999999765 46889999999999999999996 8886431111 22 3444444 3332
Q ss_pred HHHHHHHhhcCceeccCc----ccchhh
Q psy10669 265 SKVELVLEEIAIACNKNT----GISLAA 288 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~----girig~ 288 (337)
..+-+.|++.||.+.+-. ++|++.
T Consensus 325 ~~~l~~l~~~Gi~~~~g~~~~g~iRiS~ 352 (377)
T 3e77_A 325 KRFLDKALELNMLSLKGHRSVGGIRASL 352 (377)
T ss_dssp HHHHHHHHHTTEESCBCCTTTCSEEEEC
T ss_pred HHHHHHHHHCCcEEeCCCCcCCEEEEEC
Confidence 234455567899986542 788774
No 25
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.57 E-value=2.1e-13 Score=129.26 Aligned_cols=240 Identities=10% Similarity=-0.032 Sum_probs=162.9
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANF 110 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~ 110 (337)
.+.+.+.-..++|.|++++...+.+. + .....++...+++.+++++|++.+ + .++.+++| +.|+.
T Consensus 3 ~~~~~~gp~~~~~~v~~a~~~~~~~~--------~----~~~~~~~~~~~~~~la~~~~~~~~-~-~~v~~~~g~t~al~ 68 (384)
T 3zrp_A 3 KLLLHVGPTTIKEDVLVAGLENNVGF--------T----SKEFVEALAYSLKGLRYVMGASKN-Y-QPLIIPGGGTSAME 68 (384)
T ss_dssp ---CCSSCSCCCHHHHHHTTCCSCCT--------T----SHHHHHHHHHHHHHHHHHHTCCTT-S-EEEEEESCHHHHHH
T ss_pred ceeccCCCCCCCHHHHHHhhcccccc--------c----cHHHHHHHHHHHHHHHHHhCCCCC-C-cEEEEcCCcHHHHH
Confidence 35677778888999999997643211 1 112244555566799999998852 1 13555555 78888
Q ss_pred HHHHhhCCc-----------------------------------------cc-----c-cccEEEEcCcc--cccccChH
Q psy10669 111 AVCEKALPT-----------------------------------------NN-----A-RFDFLSSGTTC--YSRCLDYA 141 (337)
Q Consensus 111 ~v~~aLl~~-----------------------------------------~~-----a-~pklII~~~S~--~~~~~d~~ 141 (337)
++.+++++ .+ . ++++|++..-. .+...|++
T Consensus 69 -~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~ 147 (384)
T 3zrp_A 69 -SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVK 147 (384)
T ss_dssp -HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHH
T ss_pred -HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHH
Confidence 78888754 00 0 26777776322 46888999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHH-hh------------c-
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKI-NN------------A- 189 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i-~~------------~- 189 (337)
+|.++|+++|+++++|++|..|... .++++.+| | |+++. ++.+.+ .+ .
T Consensus 148 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T 3zrp_A 148 DVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWL 227 (384)
T ss_dssp HHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHH
T ss_pred HHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHH
Confidence 9999999999999999999988754 13334322 2 44443 454444 10 0
Q ss_pred ----c----CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC---CCCeEEEEEec
Q psy10669 190 ----V----FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG---TDVHLILIDLR 258 (337)
Q Consensus 190 ----~----~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~---t~~h~v~V~~~ 258 (337)
. .....|+++.+.++++..++..+.....++.++++.++.++|.+.|.+.|+++.... ...+++++.+.
T Consensus 228 ~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 307 (384)
T 3zrp_A 228 PVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILK 307 (384)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECS
T ss_pred HHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECC
Confidence 0 112236899999999999988875444688999999999999999999999887521 12566667765
Q ss_pred CCCcchHHHHHHHhhcCceeccCc-----ccchhh
Q psy10669 259 KNKLTGSKVELVLEEIAIACNKNT-----GISLAA 288 (337)
Q Consensus 259 ~~~~~~~~~~~~L~~~gI~v~~~~-----girig~ 288 (337)
. .+..++.+.|.+.||.+.... .|||+.
T Consensus 308 ~--~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~ 340 (384)
T 3zrp_A 308 V--ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGH 340 (384)
T ss_dssp S--SCHHHHHHHHHTTTCCCEECCCTTCCEEEEEC
T ss_pred C--CCHHHHHHHHHHCCEEEecCCCCCcCEEEEec
Confidence 4 578888888988899987533 378763
No 26
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.57 E-value=2e-13 Score=131.07 Aligned_cols=234 Identities=14% Similarity=0.199 Sum_probs=157.0
Q ss_pred eeeeccCC--C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchh
Q psy10669 33 IELIASEN--F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPA 108 (337)
Q Consensus 33 i~l~asen--~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~A 108 (337)
|.|...++ + .+|.+.+++...+. ++..++.+.++..|... .++++ +.+++++|.+. .+..++|+.|
T Consensus 46 idl~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----v~~~~ggt~a 115 (398)
T 3a2b_A 46 LMFGSNSYLGLTTDTRIIKAAQDALE-KYGTGCAGSRFLNGTLDIHVELE----EKLSAYVGKEA-----AILFSTGFQS 115 (398)
T ss_dssp EECSCSCTTCGGGCHHHHHHHHHHHH-HHCSCCCSBTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHH
T ss_pred EEeecccccCCCCCHHHHHHHHHHHH-HcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHH
Confidence 44444433 2 68999999987654 44444555555556533 34454 57888999763 3555666899
Q ss_pred HHHHHHhhCCc------------------------------------c--c-c----cccEEEEcCccc--ccccChHHH
Q psy10669 109 NFAVCEKALPT------------------------------------N--N-A----RFDFLSSGTTCY--SRCLDYARF 143 (337)
Q Consensus 109 N~~v~~aLl~~------------------------------------~--~-a----~pklII~~~S~~--~~~~d~~~l 143 (337)
+..++.+++++ + + . ++++|++....+ +...|+++|
T Consensus 116 ~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l 195 (398)
T 3a2b_A 116 NLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPEL 195 (398)
T ss_dssp HHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHH
T ss_pred HHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHH
Confidence 98888998764 0 0 1 356777764333 567889999
Q ss_pred HHHhhhcCCeEEEeccccccccc----------e-------eeeec-c----CCchhhh--hHHHHHhhccCCCC-CCCC
Q psy10669 144 RQICDETDSIMFADMSHISGLIA----------G-------VKGVT-K----TGEKILY--DYEEKINNAVFPSL-QGGP 198 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~g~~ 198 (337)
.++|+++|+++++|++|..|.++ + +++|. | .||+++. ++.+.+.....+.. .+++
T Consensus 196 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~ 275 (398)
T 3a2b_A 196 TSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLGGFVAGDADVIDFLKHNARSVMFSASM 275 (398)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEECHHHHHHHHHHCHHHHSSBCC
T ss_pred HHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCCcEEEeCHHHHHHHHHhcccceecCCC
Confidence 99999999999999999877542 1 22333 2 3788765 56665554322222 3345
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
++...+++..++... ...++.++++.++.++|.+.|.+.|+++.. .+++++++.+.. +.+..++.+.|.+.||.+
T Consensus 276 ~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v 350 (398)
T 3a2b_A 276 TPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDHGFDLGA--TESPILPIFIRS-NEKTFWVTKMLQDDGVFV 350 (398)
T ss_dssp CHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHTTCCBCS--CCSSEEEEECCC-HHHHHHHHHHHHHTTEEC
T ss_pred CHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhcCCCcCC--CCCCEEEEEcCC-HHHHHHHHHHHHHCCcEE
Confidence 555555555666654 245678999999999999999999998865 456788888753 345677777887779998
Q ss_pred ccC
Q psy10669 279 NKN 281 (337)
Q Consensus 279 ~~~ 281 (337)
.+.
T Consensus 351 ~~~ 353 (398)
T 3a2b_A 351 NPV 353 (398)
T ss_dssp EEE
T ss_pred Eee
Confidence 763
No 27
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.56 E-value=6.3e-13 Score=126.19 Aligned_cols=250 Identities=11% Similarity=0.028 Sum_probs=165.4
Q ss_pred HHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 24 KEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 24 ~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
.|.-+-..+.++.|+...++|.|++++...+.. .+ + ....++...+++.+++++|.+.+.. .+.++
T Consensus 12 ~~~~~~~~~~~~~pgp~~~~~~v~~a~~~~~~~--------~~---~-~~~~~~~~~~~~~la~~~g~~~~~~--~i~~~ 77 (376)
T 3f0h_A 12 HENLYFQGMLNFTVGPVMSSEEVRAIGAEQVPY--------FR---T-TEFSSTMLENEKFMLEYAKAPEGSK--AVFMT 77 (376)
T ss_dssp ---CTTSSCEECSSSSCCCCHHHHHHHTSCCCC--------CS---S-HHHHHHHHHHHHHHHHHHTCCTTCE--EEEES
T ss_pred cccccccCceeecCCCCCCcHHHHHHhcCCCCC--------CC---C-HHHHHHHHHHHHHHHHHhCCCCCce--EEEEc
Confidence 344455578999999999999999999764321 11 1 1223444455678899999874211 24434
Q ss_pred C-CchhHHHHHHhhCCc-------------------------------------------ccc---cccEEEEc--Cccc
Q psy10669 104 S-GSPANFAVCEKALPT-------------------------------------------NNA---RFDFLSSG--TTCY 134 (337)
Q Consensus 104 S-gt~AN~~v~~aLl~~-------------------------------------------~~a---~pklII~~--~S~~ 134 (337)
+ |+.|+..++.+++++ +.+ ++++|++. .+..
T Consensus 78 ~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~npt 157 (376)
T 3f0h_A 78 CSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETST 157 (376)
T ss_dssp SCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTT
T ss_pred CChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCc
Confidence 4 489998888888754 111 26888876 3446
Q ss_pred ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhccCC----
Q psy10669 135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNAVFP---- 192 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~~p---- 192 (337)
+...|+++|.++|+++|+++++|++|..|... .++++. | .| |+++. ++.+.+.+...+
T Consensus 158 G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 237 (376)
T 3f0h_A 158 AVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYF 237 (376)
T ss_dssp TEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTT
T ss_pred ceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceee
Confidence 78899999999999999999999999987654 123333 2 12 44433 455555532111
Q ss_pred ------------CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669 193 ------------SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 193 ------------~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~ 259 (337)
+...+++...++++..++..+.+. ..++.+++..++.++|.+.|.+.|+++........++.+. .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~--~ 315 (376)
T 3f0h_A 238 DLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVH--P 315 (376)
T ss_dssp CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEE--E
T ss_pred cHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEe--C
Confidence 123466667778888888877543 3578889999999999999999898876532233444333 3
Q ss_pred CCcchHHHHHHHhhc-CceeccCc------ccchhhh
Q psy10669 260 NKLTGSKVELVLEEI-AIACNKNT------GISLAAE 289 (337)
Q Consensus 260 ~~~~~~~~~~~L~~~-gI~v~~~~------girig~~ 289 (337)
.+.+..++.+.|.+. ||.+.+.. .|||+..
T Consensus 316 ~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~ 352 (376)
T 3f0h_A 316 TTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHI 352 (376)
T ss_dssp SSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECC
T ss_pred CCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecC
Confidence 455778888888875 99987532 4777643
No 28
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.56 E-value=2.4e-14 Score=140.15 Aligned_cols=244 Identities=13% Similarity=0.066 Sum_probs=157.6
Q ss_pred HHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCC-CCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCC
Q psy10669 17 ELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG-LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQ 95 (337)
Q Consensus 17 ~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g-~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~ 95 (337)
++++-+.++.+++...+..+++.|. +.|++++..........+ ..|-.| +-...+++| ++++++||+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~~~~~~~y--~~~~~~~Le----~~lA~l~g~e~-- 76 (409)
T 3jzl_A 7 AIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFHPSTGYGY--DDEGRDTLE----RVYATVFKTEA-- 76 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGCCCCTTCT--TCHHHHHHH----HHHHHHHTCSE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccCCCcCCCC--ChhHHHHHH----HHHHHHhCCCc--
Confidence 5666677777888888999999995 788888876432211111 222221 222345666 57899999986
Q ss_pred Ccceee--cCCCchhHHHHHHhhCCc---------------c-----------------------------------c--
Q psy10669 96 WGCNVQ--PYSGSPANFAVCEKALPT---------------N-----------------------------------N-- 121 (337)
Q Consensus 96 ~~~~v~--~~Sgt~AN~~v~~aLl~~---------------~-----------------------------------~-- 121 (337)
+.++ ++||++||..++.+++++ . +
T Consensus 77 --alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ 154 (409)
T 3jzl_A 77 --ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAK 154 (409)
T ss_dssp --EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHH
T ss_pred --EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHH
Confidence 3444 789999999999988543 0 0
Q ss_pred c---cccEEEEcCc---cc---ccccChHHHHHHhhh--cCCeEEEeccccccccc---------eeeeec-c-------
Q psy10669 122 A---RFDFLSSGTT---CY---SRCLDYARFRQICDE--TDSIMFADMSHISGLIA---------GVKGVT-K------- 173 (337)
Q Consensus 122 a---~pklII~~~S---~~---~~~~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~~T~-~------- 173 (337)
+ ++|+|++..| .+ +...|+++|.++|++ +|+++++|++|..++.. .+++|. |
T Consensus 155 ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~ 234 (409)
T 3jzl_A 155 KMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLA 234 (409)
T ss_dssp HCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTC
T ss_pred hccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCC
Confidence 0 1578887642 33 344566777789999 99999999999998742 234443 2
Q ss_pred -CCchhhh--hHHHHHhhc-cCCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669 174 -TGEKILY--DYEEKINNA-VFPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG 247 (337)
Q Consensus 174 -~Gg~i~~--~l~~~i~~~-~~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~ 247 (337)
.||++++ ++.+++... ..|++ ..++.+....++..++. ..+.++++..+|++++++.|.+.|++|..
T Consensus 235 ~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~g~~v~p-- 307 (409)
T 3jzl_A 235 KTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAAMLAEFGVEADP-- 307 (409)
T ss_dssp SSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCEEES--
T ss_pred ceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhCCCcccC--
Confidence 2688776 566666542 23444 12233222222222222 34578999999999999999999999964
Q ss_pred CCCe-----EEEEEecCCCcchHHHHHHHhhc---Cceecc
Q psy10669 248 TDVH-----LILIDLRKNKLTGSKVELVLEEI---AIACNK 280 (337)
Q Consensus 248 t~~h-----~v~V~~~~~~~~~~~~~~~L~~~---gI~v~~ 280 (337)
..+| +++|.+++.. ....+.+.|+.. +.++.+
T Consensus 308 ~~~~~~~~~i~~i~l~~~~-~~~~~~~~L~~~~~~~s~~~p 347 (409)
T 3jzl_A 308 VWDAPRTDLIQSVSFHNKE-KMVAFAQAIQAASPVNAHVLP 347 (409)
T ss_dssp CTTSCCSSSCCEEECSCHH-HHHHHHHHHHHTSSSSTTSCC
T ss_pred CCCCCCccEEEEEEeCCHH-HHHHHHHHHHhcCcccccCCC
Confidence 3666 8888887433 555666777764 444444
No 29
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.55 E-value=8e-13 Score=126.81 Aligned_cols=242 Identities=12% Similarity=0.065 Sum_probs=166.2
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPAN 109 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN 109 (337)
..+.+.|.-.-++|.|.+++...+.. .+ . ....++...+++.+++++|.+.+ ..+.++ ||+.|+
T Consensus 13 ~~~~~~pgp~~~~~~v~~a~~~~~~~--------~~---~-~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~sgt~al 77 (411)
T 3nnk_A 13 SRLLMGPGPINADPRVLRAMSSQLIG--------QY---D-PAMTHYMNEVMALYRGVFRTENR---WTMLVDGTSRAGI 77 (411)
T ss_dssp CCEEESSSCCCCCHHHHHHHTSCCCC--------TT---C-HHHHHHHHHHHHHHHHHHTCCCS---EEEEEESCHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhhccccc--------cc---c-HHHHHHHHHHHHHHHHHhCCCCC---cEEEECCCcHHHH
Confidence 34667777777899999999754211 11 1 11234445556799999999864 125555 558898
Q ss_pred HHHHHhhCCc-------------------------------------------c--c-c-cccEEEEcCc--ccccccCh
Q psy10669 110 FAVCEKALPT-------------------------------------------N--N-A-RFDFLSSGTT--CYSRCLDY 140 (337)
Q Consensus 110 ~~v~~aLl~~-------------------------------------------~--~-a-~pklII~~~S--~~~~~~d~ 140 (337)
..++.+++++ + + . ++++|++... ..+...|+
T Consensus 78 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 157 (411)
T 3nnk_A 78 EAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPL 157 (411)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred HHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccH
Confidence 8888888754 0 0 1 3788888642 34688899
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhcc------------
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNAV------------ 190 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~~------------ 190 (337)
++|.++|+++|+++++|++|..|... .++++.+| | |+++. ++.+.+.+..
T Consensus 158 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 237 (411)
T 3nnk_A 158 AELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHR 237 (411)
T ss_dssp TTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCC
T ss_pred HHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccc
Confidence 99999999999999999999988764 12333322 3 44443 4655555321
Q ss_pred -----------------------CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669 191 -----------------------FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG 247 (337)
Q Consensus 191 -----------------------~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~ 247 (337)
.....++++.+.++++..++..+.+...++.++++.++.++|.+.|.+.|+++....
T Consensus 238 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 317 (411)
T 3nnk_A 238 DGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDL 317 (411)
T ss_dssp CCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCG
T ss_pred cccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCc
Confidence 011246889999999999888875433688999999999999999999999887521
Q ss_pred --CCCeEEEEEecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669 248 --TDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA 288 (337)
Q Consensus 248 --t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~ 288 (337)
...+++.+.+.. +.+..++.+.|.+ +||.+.... .|||+.
T Consensus 318 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~ 366 (411)
T 3nnk_A 318 KHKMNNVLGVVIPQ-GINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGT 366 (411)
T ss_dssp GGBCSSEEEEECCT-TCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEEC
T ss_pred ccccccEEEEECCC-CCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeC
Confidence 235666666643 4577788887765 599987532 688875
No 30
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.55 E-value=8.1e-13 Score=126.19 Aligned_cols=244 Identities=9% Similarity=0.025 Sum_probs=167.7
Q ss_pred cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 29 QINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 29 q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
+.+.+++.++...++|.|++++...+... + +...++....+++.+++++|.++. .++.+++| +.
T Consensus 17 ~~~~~~~~~g~~~~~~~v~~a~~~~~~~~----------~--~~~~~~~~~~l~~~la~~~g~~~~---~~i~~~~g~t~ 81 (393)
T 2huf_A 17 TPNKLLMGPGPSNAPQRVLDAMSRPILGH----------L--HPETLKIMDDIKEGVRYLFQTNNI---ATFCLSASGHG 81 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTSCCCCT----------T--SHHHHHHHHHHHHHHHHHHTCCCS---EEEEESSCHHH
T ss_pred CCCeEEecCCCCCCCHHHHHHHHhhhccC----------C--CHHHHHHHHHHHHHHHHHhCCCCC---cEEEEcCcHHH
Confidence 34567788887788999999987643221 1 112344555566899999998752 14666554 88
Q ss_pred hHHHHHHhhCCc-------------------------------------------c--c-c-cccEEEEcCcc--ccccc
Q psy10669 108 ANFAVCEKALPT-------------------------------------------N--N-A-RFDFLSSGTTC--YSRCL 138 (337)
Q Consensus 108 AN~~v~~aLl~~-------------------------------------------~--~-a-~pklII~~~S~--~~~~~ 138 (337)
|+..++.+++++ + + . ++++|++..-. .+...
T Consensus 82 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~ 161 (393)
T 2huf_A 82 GMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQ 161 (393)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred HHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccC
Confidence 998888988654 0 0 1 36777776322 36788
Q ss_pred ChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhc---cCC-----
Q psy10669 139 DYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNA---VFP----- 192 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~---~~p----- 192 (337)
|+++|.++|+++|+++++|++|..|... .++++. | .| |+++. ++.+.+... ..|
T Consensus 162 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
T 2huf_A 162 GLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDM 241 (393)
T ss_dssp CCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCH
T ss_pred CHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEch
Confidence 8999999999999999999999987654 123332 3 23 45544 566665533 112
Q ss_pred --------------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-C-CCeEEEEE
Q psy10669 193 --------------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-T-DVHLILID 256 (337)
Q Consensus 193 --------------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t-~~h~v~V~ 256 (337)
...++++.+.++++..++..+.+...++.++++.++.++|.+.|.+.|+++.... + .++++.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 321 (393)
T 2huf_A 242 SLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIK 321 (393)
T ss_dssp HHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEE
T ss_pred HHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEE
Confidence 1246889999999988888775434678899999999999999999998876521 1 24466676
Q ss_pred ecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669 257 LRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA 288 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~ 288 (337)
+.. +.+..++.+.|.+ +||.+.... .+||+.
T Consensus 322 ~~~-~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~ 359 (393)
T 2huf_A 322 VPQ-GVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGL 359 (393)
T ss_dssp CCT-TCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEEC
T ss_pred cCC-CCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEc
Confidence 642 4567788887764 699998532 688876
No 31
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.54 E-value=2.8e-12 Score=121.57 Aligned_cols=233 Identities=12% Similarity=0.101 Sum_probs=160.1
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhc--cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNK--YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG- 105 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~--y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg- 105 (337)
..|.|...+|.. +|.|++++...+.+. ...+++... ..+++ +.+++++|.+. .+|.+++|
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~-------~~~lr----~~la~~~g~~~----~~i~~t~g~ 91 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSAS-------SQKLR----EVAGELYGFDP----SWIIMANGS 91 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSS-------CHHHH----HHHHHHHTCCG----GGEEEESSH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCc-------hHHHH----HHHHHHhCcCc----ceEEEcCCH
Confidence 457777777765 899999998765442 012232211 13444 67889999765 25667666
Q ss_pred chhHHHHHHhhCCc-------------------------------------ccc---cccEEEEcCcc--cccccChHHH
Q psy10669 106 SPANFAVCEKALPT-------------------------------------NNA---RFDFLSSGTTC--YSRCLDYARF 143 (337)
Q Consensus 106 t~AN~~v~~aLl~~-------------------------------------~~a---~pklII~~~S~--~~~~~d~~~l 143 (337)
++|+..++.+++++ ++. ++|+|++.... .+...|.+++
T Consensus 92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l 171 (360)
T 3hdo_A 92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYI 171 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHH
Confidence 78988888998764 011 26777776333 3689999999
Q ss_pred HHHhhhcCCeEEEeccccc----cccc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHH
Q psy10669 144 RQICDETDSIMFADMSHIS----GLIA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNH 201 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~----Gli~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~ 201 (337)
.+||+++|+++++|++|.. +.+. .+++|. | .| |+++. ++.+.+.....+ .++++.
T Consensus 172 ~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~---~~~~~~ 248 (360)
T 3hdo_A 172 DELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRDH---YNLDRL 248 (360)
T ss_dssp HHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSCS---CCSCHH
T ss_pred HHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCCC---CCCCHH
Confidence 9999999999999999984 1111 123333 3 12 66655 577777665433 357777
Q ss_pred HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
..+++..++.. ....++.++++.++.++|.+.|.+.|+.+.. .....+++.+. +.+..++.+.|.+.||.+...
T Consensus 249 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~~ 322 (360)
T 3hdo_A 249 AQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIP--SQGNYLFATPP--DRDGKRVYDGLYARKVLVRHF 322 (360)
T ss_dssp HHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECC--CSSSEEEEECT--TCCHHHHHHHHHHTTEECBCC
T ss_pred HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcC--CCccEEEEECC--CCCHHHHHHHHHHCCEEEEEC
Confidence 77777777764 2345788999999999999999999998865 45556666654 457888889999999999763
Q ss_pred c------ccchh
Q psy10669 282 T------GISLA 287 (337)
Q Consensus 282 ~------girig 287 (337)
. .+||+
T Consensus 323 ~~~~~~~~iRis 334 (360)
T 3hdo_A 323 SDPLLAHGMRIS 334 (360)
T ss_dssp CSTTTTTSEEEE
T ss_pred CCCCCCCEEEEE
Confidence 3 56665
No 32
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.54 E-value=8.3e-13 Score=132.19 Aligned_cols=266 Identities=12% Similarity=0.069 Sum_probs=170.5
Q ss_pred HHHHHHHHHHhhcccceeeecc--CCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC--
Q psy10669 17 ELYSLIKKEKHRQINGIELIAS--ENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-- 92 (337)
Q Consensus 17 ~~~~~~~~e~~rq~~~i~l~as--en~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-- 92 (337)
++++.++++.....+....++| ..+++|.+.+++...+...+ +++ .......++|..+++.++++||++
T Consensus 41 ~~~~~~~~~i~l~gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~--~~~-----~~~p~~~~le~~~~~~la~l~g~~~~ 113 (502)
T 3hbx_A 41 AAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNAPLE 113 (502)
T ss_dssp HHHHHHHHHGGGSCCGGGBTTCCSCCCCCHHHHHHHHHTTTCBT--TCT-----TTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhccCCCCCceeccccCCCCCHHHHHHHHHHhccCC--CCh-----hcChhHHHHHHHHHHHHHHHhCCCcc
Confidence 4677777665554443322344 35669999999987654432 111 222336789999999999999998
Q ss_pred CCCCcceeecCCCchhHHHHHHhhC-----------C-----c-------------------------------------
Q psy10669 93 PEQWGCNVQPYSGSPANFAVCEKAL-----------P-----T------------------------------------- 119 (337)
Q Consensus 93 ~~~~~~~v~~~Sgt~AN~~v~~aLl-----------~-----~------------------------------------- 119 (337)
+.+....+..++|+.||+.++.++. . .
T Consensus 114 ~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~ 193 (502)
T 3hbx_A 114 EAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQ 193 (502)
T ss_dssp SSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHH
T ss_pred cccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHH
Confidence 3222123445677899877666541 0 1
Q ss_pred ccc-----cccEEEEc-Ccc-cccccChHHHHHHhhhc------CCeEEEeccccccccc-------------e---eee
Q psy10669 120 NNA-----RFDFLSSG-TTC-YSRCLDYARFRQICDET------DSIMFADMSHISGLIA-------------G---VKG 170 (337)
Q Consensus 120 ~~a-----~pklII~~-~S~-~~~~~d~~~l~eia~~~------ga~l~vD~AH~~Gli~-------------g---~~~ 170 (337)
.+. +|++|++. +++ .+...|+++|.++|+++ |++++||+||+.++.+ + +++
T Consensus 194 ~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~ 273 (502)
T 3hbx_A 194 QAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINV 273 (502)
T ss_dssp HHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEE
T ss_pred HHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEE
Confidence 000 26766655 333 46888999999999999 9999999999866531 1 222
Q ss_pred eccC------C-chh-hh--hH-HHHHhh--ccC------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669 171 VTKT------G-EKI-LY--DY-EEKINN--AVF------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231 (337)
Q Consensus 171 T~~~------G-g~i-~~--~l-~~~i~~--~~~------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~ 231 (337)
.+|| | |++ +. ++ .+.+.. ... ..+.++.....++++..++..+....+.+++++..+++++
T Consensus 274 s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~ 353 (502)
T 3hbx_A 274 SGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIV 353 (502)
T ss_dssp ETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2232 2 333 32 22 111110 100 1112445555677777787776556788999999999999
Q ss_pred HHHHHHhCC-CEEecCCCCCeEEEEEecC-CCcchHHHHHHHhhcCceeccCc---------ccchhhh
Q psy10669 232 LSDEMIKRG-YHVVTGGTDVHLILIDLRK-NKLTGSKVELVLEEIAIACNKNT---------GISLAAE 289 (337)
Q Consensus 232 l~~~L~~~G-~~v~~~~t~~h~v~V~~~~-~~~~~~~~~~~L~~~gI~v~~~~---------girig~~ 289 (337)
|++.|.+.| ++++......+++.+.+.. .+++..++.+.|.+.||.+.... .+||++.
T Consensus 354 l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~ 422 (502)
T 3hbx_A 354 LREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR 422 (502)
T ss_dssp HHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC
T ss_pred HHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC
Confidence 999999976 9988632467788888764 34677789999999999875322 4777643
No 33
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.53 E-value=1.9e-12 Score=122.91 Aligned_cols=243 Identities=11% Similarity=0.059 Sum_probs=165.8
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPAN 109 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN 109 (337)
......++...++|.|.+++...+.+. |+ . ...++...+++.+++++|.+.+ .++.+++ |+.|+
T Consensus 20 ~~~l~~~~~~~~~~~v~~a~~~~~~~~----------~~-~-~~~~~~~~~~~~la~~~g~~~~---~~v~~~~g~t~a~ 84 (386)
T 2dr1_A 20 KYKLFTAGPVACFPEVLEIMKVQMFSH----------RS-K-EYRKVHMDTVERLREFLEVEKG---EVLLVPSSGTGIM 84 (386)
T ss_dssp CSEECCSSSCCCCHHHHHHTTSCCCCT----------TS-H-HHHHHHHHHHHHHHHHHTCSSS---EEEEESSCHHHHH
T ss_pred cceeecCCCcCCcHHHHHHHhcccccc----------cC-H-HHHHHHHHHHHHHHHHhCCCCC---cEEEEeCChHHHH
Confidence 345566777888999999987643321 11 1 1244555556789999999721 2465554 48899
Q ss_pred HHHHHhhCCc---------------------------------------------cc---ccccEEEEcCc--ccccccC
Q psy10669 110 FAVCEKALPT---------------------------------------------NN---ARFDFLSSGTT--CYSRCLD 139 (337)
Q Consensus 110 ~~v~~aLl~~---------------------------------------------~~---a~pklII~~~S--~~~~~~d 139 (337)
..++.+++++ .+ .++++|++..- ..+...|
T Consensus 85 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 164 (386)
T 2dr1_A 85 EASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP 164 (386)
T ss_dssp HHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC
T ss_pred HHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC
Confidence 8888988654 11 12678877632 2367789
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhh-------------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINN------------- 188 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~------------- 188 (337)
+++|.++|+++|+++++|++|..|... .++++. | .| |+++. ++.+.+.+
T Consensus 165 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
T 2dr1_A 165 LPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLY 244 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHH
T ss_pred HHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHH
Confidence 999999999999999999999988763 133333 2 23 56654 45554421
Q ss_pred --cc--CCCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEecCC--CCCeEEEEEecCCC
Q psy10669 189 --AV--FPSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVVTGG--TDVHLILIDLRKNK 261 (337)
Q Consensus 189 --~~--~p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t~~h~v~V~~~~~~ 261 (337)
.. .....++++++..+++..++..+.+. ..++.++++.++.+++.+.|.+.|+++.... ...+++++.+.. +
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~ 323 (386)
T 2dr1_A 245 VKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPP-G 323 (386)
T ss_dssp HHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCT-T
T ss_pred HHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCC-C
Confidence 00 01224578888899888888876432 3678899999999999999999998886521 136777787753 4
Q ss_pred cchHHHHHHHhhcCceeccCc------ccchhhh
Q psy10669 262 LTGSKVELVLEEIAIACNKNT------GISLAAE 289 (337)
Q Consensus 262 ~~~~~~~~~L~~~gI~v~~~~------girig~~ 289 (337)
.+..++.+.|.+.||.+.+.. .+||+..
T Consensus 324 ~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~ 357 (386)
T 2dr1_A 324 IKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHM 357 (386)
T ss_dssp CCHHHHHHHHHHTTEECEECCGGGTTTEEEEECC
T ss_pred CCHHHHHHHHHHCCeEEecCccccCCCEEEEECC
Confidence 467788888887799987632 6777644
No 34
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.53 E-value=2.5e-12 Score=123.55 Aligned_cols=242 Identities=10% Similarity=0.073 Sum_probs=165.6
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCccee-ecCCCchhH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNV-QPYSGSPAN 109 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v-~~~Sgt~AN 109 (337)
..+++.+.-..+++.|.+++..... + . + .....++...+++.+++++|.+++ ..+ ...||+.|+
T Consensus 11 ~~~~~~p~p~~~~~~v~~a~~~~~~-----~---~--~--~~~~~~~~~~l~~~la~~~g~~~~---~~~~~~~s~t~al 75 (416)
T 3isl_A 11 LRTIMTPGPVEVDPRVLRVMSTPVV-----G---Q--F--DPAFTGIMNETMEMLRELFQTKNR---WAYPIDGTSRAGI 75 (416)
T ss_dssp CCEECSSSSCCCCHHHHHHTTSCCC-----C---T--T--SHHHHHHHHHHHHHHHHHTTCCCS---EEEEEESCHHHHH
T ss_pred cceeecCCCcCcCHHHHHHhcccCC-----C---C--c--cHHHHHHHHHHHHHHHHHhCCCCC---cEEEecCcHHHHH
Confidence 4566778878889999998865211 1 1 1 112245555566899999998863 134 345667998
Q ss_pred HHHHHhhCCc-------------------------------------------c--c--ccccEEEEcCcc--cccccCh
Q psy10669 110 FAVCEKALPT-------------------------------------------N--N--ARFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 110 ~~v~~aLl~~-------------------------------------------~--~--a~pklII~~~S~--~~~~~d~ 140 (337)
..++.+++++ + + .++++|++..-. .+...|+
T Consensus 76 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 155 (416)
T 3isl_A 76 EAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPL 155 (416)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred HHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCH
Confidence 8888888764 0 0 136888776322 4688899
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhc-------------
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNA------------- 189 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~------------- 189 (337)
++|.++|+++|+++++|++|+.|.+. .++++.+| | |+++. ++.+.+.+.
T Consensus 156 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~ 235 (416)
T 3isl_A 156 KAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADR 235 (416)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-------------
T ss_pred HHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccc
Confidence 99999999999999999999988764 12333322 2 44433 455555421
Q ss_pred ------------------------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669 190 ------------------------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT 245 (337)
Q Consensus 190 ------------------------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~ 245 (337)
......++++.+.++++..++..+.....++.++++.++.++|.+.|.+.|+++..
T Consensus 236 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 315 (416)
T 3isl_A 236 AALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFG 315 (416)
T ss_dssp -----CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCS
T ss_pred hhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEecc
Confidence 11223578899999999999888754336899999999999999999999998875
Q ss_pred CC--CCCeEEEEEecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669 246 GG--TDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA 288 (337)
Q Consensus 246 ~~--t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~ 288 (337)
.. ...+++.+.+.. +.+..++.+.|.+ +||.+.... .+||+.
T Consensus 316 ~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~ 366 (416)
T 3isl_A 316 DDSCKMPVVTCVEIPG-GIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGT 366 (416)
T ss_dssp CGGGBCTTEEEEECCT-TCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEEC
T ss_pred CccccCCcEEEEeCCC-CCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEec
Confidence 21 124566666642 4577888888865 599998532 688875
No 35
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.8e-13 Score=135.86 Aligned_cols=239 Identities=12% Similarity=0.098 Sum_probs=156.6
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCCchhHHHHHHhhCC---
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSGSPANFAVCEKALP--- 118 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sgt~AN~~v~~aLl~--- 118 (337)
++.+.+++...+. ++...++.. +.......++|..+++.++++||.+ .+.+ .+..++|+.||..++.++.+
T Consensus 77 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~l~~~~~~~la~~~g~~~~~~~--~~~~~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 77 GDDLIHLQTIAYE-KYCVANQLH--PDVFPAVRKMESEVVSMVLRMFNAPSDTGC--GTTTSGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CHHHHHHHHHHHH-HTSSCBTTC--TTTCHHHHHHHHHHHHHHHHHTTCCTTTCC--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHH-HHhhcCCCC--cccChHHHHHHHHHHHHHHHHhCCCCCCCe--EEEcCcHHHHHHHHHHHHHHHHH
Confidence 4777777766533 333222222 2333445678888888999999998 2222 34445558898888777631
Q ss_pred -------c-----------------------------c---------cc-----cccEEEEcCcc--cccccChHHHHHH
Q psy10669 119 -------T-----------------------------N---------NA-----RFDFLSSGTTC--YSRCLDYARFRQI 146 (337)
Q Consensus 119 -------~-----------------------------~---------~a-----~pklII~~~S~--~~~~~d~~~l~ei 146 (337)
+ . +. +|++|++...+ ++...|+++|.+|
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~l 231 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKI 231 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTH
T ss_pred hcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHH
Confidence 1 1 11 26777776333 5788999999999
Q ss_pred hhhcCCeEEEeccccccccc------------------e---ee-eeccC------Cchhhh--hHHHHHhhcc------
Q psy10669 147 CDETDSIMFADMSHISGLIA------------------G---VK-GVTKT------GEKILY--DYEEKINNAV------ 190 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~Gli~------------------g---~~-~T~~~------Gg~i~~--~l~~~i~~~~------ 190 (337)
|+++|++|+||++|+.+++. | ++ +++|. .|+++. +.........
T Consensus 232 a~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 311 (497)
T 3mc6_A 232 AQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTG 311 (497)
T ss_dssp HHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTT
T ss_pred HHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccC
Confidence 99999999999999854321 1 22 23331 244443 2322221111
Q ss_pred ----CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCcch
Q psy10669 191 ----FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKLTG 264 (337)
Q Consensus 191 ----~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~~~ 264 (337)
.|.+.|+.....++++.+++..+....++++.+++.+++++|++.|.+. |+++++. ....+ +.+...+.++
T Consensus 312 ~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~-~~~~~--v~~~~~~~~~ 388 (497)
T 3mc6_A 312 GLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN-PRYSV--ISFSSKTLNI 388 (497)
T ss_dssp SCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC-CCSSE--EEEECTTTTH
T ss_pred CCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CCeeE--EEEeCCCCCH
Confidence 2223445555668888888887766677899999999999999999995 9998753 22333 4444556688
Q ss_pred HHHHHHHhhcCceeccCc---ccchhhh
Q psy10669 265 SKVELVLEEIAIACNKNT---GISLAAE 289 (337)
Q Consensus 265 ~~~~~~L~~~gI~v~~~~---girig~~ 289 (337)
.++.+.|.+.||.++... ++|++..
T Consensus 389 ~~l~~~L~~~Gi~v~~~~~~~~~ri~~~ 416 (497)
T 3mc6_A 389 HELSDRLSKKGWHFNALQKPVALHMAFT 416 (497)
T ss_dssp HHHHHHHHTTTCBCEECCSSCCEEEECC
T ss_pred HHHHHHHHhCCEEEecCCCCCeEEEEEe
Confidence 999999999999987644 6788765
No 36
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.53 E-value=7e-13 Score=124.71 Aligned_cols=243 Identities=14% Similarity=0.025 Sum_probs=158.6
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPAN 109 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN 109 (337)
.+++.+.-.-.+|.|++++...+ + .++.... ....++ ++.+++++|.+. ++ ..+.++ ||+.|+
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~------~---~~~~~~~~~~~~~l----~~~la~~~g~~~-~~-~~v~~~~g~t~a~ 69 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDS------C---TWDDDYNIGVVEQI----RQQLTALATASE-GY-TSVLLQGSGSYAV 69 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCC------C---TTSHHHHTTTHHHH----HHHHHHHHCSSS-SE-EEEEEESCHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhh------c---CCCHHHHHHHHHHH----HHHHHHHhCCCC-cC-cEEEEecChHHHH
Confidence 45666665557999999987531 1 1110001 223344 468889999421 11 135554 458899
Q ss_pred HHHHHhhCCc-------------------------------------------c--cc---cccEEEEcCccc--ccccC
Q psy10669 110 FAVCEKALPT-------------------------------------------N--NA---RFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 110 ~~v~~aLl~~-------------------------------------------~--~a---~pklII~~~S~~--~~~~d 139 (337)
..++.+++++ + +. ++++|++....+ +...|
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 149 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP 149 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC
Confidence 8888888643 0 00 256776653333 68889
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhccCCC--------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNAVFPS-------- 193 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~~p~-------- 193 (337)
+++|.++|+++|+++++|++|+.|... .++++. | .| |+++. ++.+.+.....+.
T Consensus 150 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 1m32_A 150 IDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQW 229 (366)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHH
Confidence 999999999999999999999987654 123333 3 24 66654 4544443321111
Q ss_pred ---------CCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhCCCEEecCC--CCCeEEEEEecC-C
Q psy10669 194 ---------LQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKRGYHVVTGG--TDVHLILIDLRK-N 260 (337)
Q Consensus 194 ---------~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t~~h~v~V~~~~-~ 260 (337)
..++++++.++++..++..+.+.. +++.++++.++.++|.+.|.+.|+++.... ..+.++++.+.. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (366)
T 1m32_A 230 RCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDP 309 (366)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCT
T ss_pred hhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccC
Confidence 125788888989888888875432 578899999999999999999888876421 124477777753 1
Q ss_pred CcchHHHHHHHhhcCceeccCc-----ccchhhh
Q psy10669 261 KLTGSKVELVLEEIAIACNKNT-----GISLAAE 289 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~~~-----girig~~ 289 (337)
+.+..++.+.|.+.||.+.+.. .+||+..
T Consensus 310 ~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~ 343 (366)
T 1m32_A 310 QYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNI 343 (366)
T ss_dssp TCCHHHHHHHHHHTTEECEECCCSSSCEEEEECC
T ss_pred CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecC
Confidence 4577888888888899987532 6787644
No 37
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.53 E-value=2.5e-12 Score=120.34 Aligned_cols=240 Identities=10% Similarity=0.046 Sum_probs=164.1
Q ss_pred eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC-chhHH
Q psy10669 33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG-SPANF 110 (337)
Q Consensus 33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg-t~AN~ 110 (337)
+++.|...-++|.|++++...+.+ .+ +. ...+.+..+++.+++++|.+ .+ ..+.+++| +.|+.
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~--------~~---~~-~~~~~~~~l~~~la~~~g~~~~~---~~v~~t~g~t~a~~ 66 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRG--------HL---DP-EVLRVNRAIQERLAALFDPGEGA---LVAALAGSGSLGME 66 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCC--------TT---CH-HHHHHHHHHHHHHHHHHCCCTTC---EEEEESSCHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhccccc--------cc---CH-HHHHHHHHHHHHHHHHhCCCCCC---ceEEEcCCcHHHHH
Confidence 467788888899999998765332 11 11 22344555668999999986 11 25777666 78888
Q ss_pred HHHHhhCCc-----------------------------------------cc---c-cccEEEEcCccc--ccccChHHH
Q psy10669 111 AVCEKALPT-----------------------------------------NN---A-RFDFLSSGTTCY--SRCLDYARF 143 (337)
Q Consensus 111 ~v~~aLl~~-----------------------------------------~~---a-~pklII~~~S~~--~~~~d~~~l 143 (337)
.++.+++++ +. . +|++|++....+ +...|+++|
T Consensus 67 ~~~~~~~~d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i 146 (353)
T 2yrr_A 67 AGLANLDRGPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAI 146 (353)
T ss_dssp HHHHTCSCCCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHH
T ss_pred HHHHHhcCCcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHH
Confidence 877777532 00 1 367887764333 678899999
Q ss_pred HHHhhhcCCeEEEeccccccccc---------eee-eecc-----CC-chhhh--hHHHHHhh--cc------------C
Q psy10669 144 RQICDETDSIMFADMSHISGLIA---------GVK-GVTK-----TG-EKILY--DYEEKINN--AV------------F 191 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~---------g~~-~T~~-----~G-g~i~~--~l~~~i~~--~~------------~ 191 (337)
.++|+++|+++++|++|..|... .++ +++| .| |+++. ++.+.+.. .. .
T Consensus 147 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 226 (353)
T 2yrr_A 147 GALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWER 226 (353)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTT
T ss_pred HHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhc
Confidence 99999999999999999877654 122 2333 23 55544 45554431 00 0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CCCeEEEEEecCCCcchHHHHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-TDVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
....++++.+.++++..++..+.+..+++.++++.++.++|.+.|.+.|+++.... ..++++++.+. .+.+..++.+.
T Consensus 227 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 305 (353)
T 2yrr_A 227 GGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPP-EGVDADRLVRA 305 (353)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECC-TTCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECC-CCCCHHHHHHH
Confidence 12245788888888888887765434678899999999999999999999887521 14677777764 24577888888
Q ss_pred HhhcCceeccCc------ccchhh
Q psy10669 271 LEEIAIACNKNT------GISLAA 288 (337)
Q Consensus 271 L~~~gI~v~~~~------girig~ 288 (337)
|.+.||.+.+.. .+||+.
T Consensus 306 l~~~gi~v~~g~~~~~~~~iRi~~ 329 (353)
T 2yrr_A 306 LYAEGVAVAGGIGPTRGQVLRLGL 329 (353)
T ss_dssp HHHTTEECEECCGGGTTTCEEEEC
T ss_pred HHHCCEEEeCCccccCCCeEEEec
Confidence 988899987532 678875
No 38
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.52 E-value=2.9e-12 Score=122.26 Aligned_cols=235 Identities=10% Similarity=-0.008 Sum_probs=158.9
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHHHHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFAVCE 114 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~v~~ 114 (337)
.++....+|.|++++...+.+ .+ +. ...+....+++.+++++|.+.. ++.++ ||+.|+..++.
T Consensus 14 ~~~~~~~~~~v~~a~~~~~~~--------~~---~~-~~~~~~~~l~~~la~~~g~~~~----~v~~t~g~t~a~~~~~~ 77 (392)
T 2z9v_A 14 TAGPVNAYPEVLRGLGRTVLY--------DY---DP-AFQLLYEKVVDKAQKAMRLSNK----PVILHGEPVLGLEAAAA 77 (392)
T ss_dssp SSSCCCCCHHHHHHTTSCCCC--------TT---SH-HHHHHHHHHHHHHHHHTTCSSC----CEEESSCTHHHHHHHHH
T ss_pred cCCCcCCCHHHHHHHhccccc--------cc---cH-HHHHHHHHHHHHHHHHhCCCCC----EEEEeCCchHHHHHHHH
Confidence 344556699999998764332 11 11 1223334456788999998742 46664 55889988888
Q ss_pred hhCCc---------------------------------------------cc---ccccEEEEcCccc--ccccChHHHH
Q psy10669 115 KALPT---------------------------------------------NN---ARFDFLSSGTTCY--SRCLDYARFR 144 (337)
Q Consensus 115 aLl~~---------------------------------------------~~---a~pklII~~~S~~--~~~~d~~~l~ 144 (337)
+++++ .+ .++++|++..-.+ +...|+++|.
T Consensus 78 ~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~ 157 (392)
T 2z9v_A 78 SLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIG 157 (392)
T ss_dssp HHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHH
T ss_pred HhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHH
Confidence 88654 01 1367887764333 6788999999
Q ss_pred HHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhcc----------------
Q psy10669 145 QICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNAV---------------- 190 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~---------------- 190 (337)
++|+++|+++++|++|+.|... .++++. | .| |+++. ++.+.+.+..
T Consensus 158 ~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~ 237 (392)
T 2z9v_A 158 ALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENA 237 (392)
T ss_dssp HHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTT
T ss_pred HHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhh
Confidence 9999999999999999987654 123333 3 23 45544 4555554310
Q ss_pred ---CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CC--CCCeEEEEEecCCCcch
Q psy10669 191 ---FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GG--TDVHLILIDLRKNKLTG 264 (337)
Q Consensus 191 ---~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~--t~~h~v~V~~~~~~~~~ 264 (337)
.....++++.+.++++..++..+.+..+++.+++..++.++|.+.|.+.|+++.. .. ...+++.+.+.. +.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~ 316 (392)
T 2z9v_A 238 WSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPD-GVDE 316 (392)
T ss_dssp TSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCT-TCCH
T ss_pred hcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCC-CCCH
Confidence 0122577888888888888877654336788999999999999999988888764 21 146777777642 4567
Q ss_pred HHHHHHHhhc-CceeccCc------ccchh
Q psy10669 265 SKVELVLEEI-AIACNKNT------GISLA 287 (337)
Q Consensus 265 ~~~~~~L~~~-gI~v~~~~------girig 287 (337)
.++.+.|.+. ||.+.... .+||+
T Consensus 317 ~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~ 346 (392)
T 2z9v_A 317 KALRQAARARYGVVFSSGRGETLGKLTRIG 346 (392)
T ss_dssp HHHHHHHHHHHCEECEECCGGGTTTEEEEE
T ss_pred HHHHHHHHhcCCEEEecCCCCCCCCeEEEe
Confidence 8888888875 99987532 68887
No 39
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.52 E-value=1.5e-12 Score=123.44 Aligned_cols=231 Identities=16% Similarity=0.123 Sum_probs=154.8
Q ss_pred cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh
Q psy10669 38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA 116 (337)
Q Consensus 38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL 116 (337)
+....+|.|++++...+.+.| +.+++.+..+.. ..+.....++.+++++|.+. .++.+++| +.|+..++.++
T Consensus 9 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~~~~~~~~ 81 (384)
T 1eg5_A 9 ATTRVDDRVLEEMIVFYREKY--GNPNSAHGMGIE-ANLHMEKAREKVAKVLGVSP----SEIFFTSCATESINWILKTV 81 (384)
T ss_dssp TCCCCCHHHHHHHHHHHHTCC--CCTTCSSHHHHH-HHHHHHHHHHHHHHHHTSCG----GGEEEESCHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcC--CCCccccHHHHH-HHHHHHHHHHHHHHHcCCCC----CeEEEECCHHHHHHHHHHhh
Confidence 344679999999988766544 334332211211 12333445678999999875 24666555 78988888888
Q ss_pred C----Cc------------------------------------------cc--c---cccEEEEcCcc--cccccChHHH
Q psy10669 117 L----PT------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYARF 143 (337)
Q Consensus 117 l----~~------------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~l 143 (337)
. ++ ++ + ++++|++..-. .+...|+++|
T Consensus 82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i 161 (384)
T 1eg5_A 82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDV 161 (384)
T ss_dssp HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHH
T ss_pred hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHH
Confidence 6 33 00 0 26777776333 3688899999
Q ss_pred HHHhhhcC--CeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccC------CCCCCCC
Q psy10669 144 RQICDETD--SIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVF------PSLQGGP 198 (337)
Q Consensus 144 ~eia~~~g--a~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~------p~~~g~~ 198 (337)
.++|+++| +++++|++|..|... .++++. | .| |+++. ++ .+.+.+. ....+++
T Consensus 162 ~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 239 (384)
T 1eg5_A 162 TRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PIRPLIHGGGQERGLRSGTQ 239 (384)
T ss_dssp HHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CCCCSBCSSCTTTTTBCSCC
T ss_pred HHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--ccccccccCcccccccCCCC
Confidence 99999999 999999999876433 123332 2 34 55554 33 1222221 1235678
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC--CCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG--TDVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
+.+.++++..++.... ...++.++++.++.++|.+.|.+.|+++.... ...+.+.+.+. +.+..++.+.|.+.||
T Consensus 240 ~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi 316 (384)
T 1eg5_A 240 NVPGIVGAARAMEIAV-EELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFP--NIRGSTLQNLLSGYGI 316 (384)
T ss_dssp CHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECT--TCCHHHHHHHHHHTTE
T ss_pred ChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeC--CCCHHHHHHHHhhCCe
Confidence 8888888888887753 45688899999999999999999999886521 12345555554 3467888889988999
Q ss_pred eecc
Q psy10669 277 ACNK 280 (337)
Q Consensus 277 ~v~~ 280 (337)
.+.+
T Consensus 317 ~v~~ 320 (384)
T 1eg5_A 317 YVST 320 (384)
T ss_dssp ECBC
T ss_pred EEec
Confidence 9876
No 40
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.51 E-value=6.2e-13 Score=128.38 Aligned_cols=243 Identities=14% Similarity=0.121 Sum_probs=159.8
Q ss_pred hhcccceee-eccCCCCCHHHHHHHhhhhh--hccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 27 HRQINGIEL-IASENFTSLAVLECLGSCLQ--NKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 27 ~rq~~~i~l-~asen~~~p~V~~a~~~~l~--~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
....+.+-| .++....+|.|.+++...+. +.| +++.+..+.-.....+....+++.+++++|.+. .+|.++
T Consensus 18 ~~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~----~~v~~~ 91 (423)
T 3lvm_A 18 RAMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLVGADP----REIVFT 91 (423)
T ss_dssp --CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCG----GGEEEE
T ss_pred cccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHHHHHHHHHHHHHHcCCCC----CeEEEe
Confidence 334444443 34555679999999988766 444 555552222222334444556689999999975 256666
Q ss_pred CC-chhHHHHHHhhC-----Cc-------------------------------------------c--cc-cccEEEEcC
Q psy10669 104 SG-SPANFAVCEKAL-----PT-------------------------------------------N--NA-RFDFLSSGT 131 (337)
Q Consensus 104 Sg-t~AN~~v~~aLl-----~~-------------------------------------------~--~a-~pklII~~~ 131 (337)
+| +.|+..++.+++ +. + +. ++++|++..
T Consensus 92 ~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~ 171 (423)
T 3lvm_A 92 SGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMH 171 (423)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCS
T ss_pred CChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeC
Confidence 66 889888888776 21 0 01 267777763
Q ss_pred cc--cccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC-----C-chhhh--hHHHHHhhccC-
Q psy10669 132 TC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT-----G-EKILY--DYEEKINNAVF- 191 (337)
Q Consensus 132 S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~-----G-g~i~~--~l~~~i~~~~~- 191 (337)
.. .+...|+++|.++|+++|++|++|++|+.|... .++++.+| | |+++. ++.+.+.+...
T Consensus 172 ~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~~~ 251 (423)
T 3lvm_A 172 VNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHG 251 (423)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCS
T ss_pred CCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCccccC
Confidence 22 468889999999999999999999999998764 13333322 2 44433 23333333222
Q ss_pred -----CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC--CCeEEEEEecCCCcc
Q psy10669 192 -----PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT--DVHLILIDLRKNKLT 263 (337)
Q Consensus 192 -----p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t--~~h~v~V~~~~~~~~ 263 (337)
....++++.+.++++..++..+. ...++.++++.++.++|.+.|.+. |+++..... ..+++.+.+ .+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 328 (423)
T 3lvm_A 252 GGHERGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSF--NYVE 328 (423)
T ss_dssp SCTTTTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEE--TTSC
T ss_pred CcccccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEe--CCCC
Confidence 12357888999999988887764 346888999999999999999886 898876221 134555655 4557
Q ss_pred hHHHHHHHhhcCceecc
Q psy10669 264 GSKVELVLEEIAIACNK 280 (337)
Q Consensus 264 ~~~~~~~L~~~gI~v~~ 280 (337)
..++.+.|.+ |.+..
T Consensus 329 ~~~l~~~l~~--i~v~~ 343 (423)
T 3lvm_A 329 GESLIMALKD--LAVSS 343 (423)
T ss_dssp HHHHHHHTTT--EECBC
T ss_pred HHHHHHHHhh--heecc
Confidence 7888888887 66554
No 41
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.51 E-value=3.3e-12 Score=122.04 Aligned_cols=241 Identities=11% Similarity=0.051 Sum_probs=163.4
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN 109 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN 109 (337)
+...+.++-..++|.|.+++...+.+. |+ . ...++...+++.+++++|.+. ++ ++.+++| +.|+
T Consensus 34 ~~~l~~~~~~~~~~~v~~a~~~~~~~~----------~~-~-~~~~~~~~~~~~la~~~g~~~-~~--~v~~t~g~t~al 98 (393)
T 1vjo_A 34 SRLLLGPGPSNAHPSVLQAMNVSPVGH----------LD-P-AFLALMDEIQSLLRYVWQTEN-PL--TIAVSGTGTAAM 98 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHHSSCCCCT----------TS-H-HHHHHHHHHHHHHHHHHTCCC-SC--EEEESSCHHHHH
T ss_pred cceeccCCCCCCCHHHHHHHhcccccc----------cC-H-HHHHHHHHHHHHHHHHhCCCC-Cc--EEEEeCchHHHH
Confidence 346667777778999999997654321 11 1 133444455678899999964 11 4666655 7899
Q ss_pred HHHHHhhCCc-------------------------------------------cc---c-cccEEEEcCcc--cccccCh
Q psy10669 110 FAVCEKALPT-------------------------------------------NN---A-RFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 110 ~~v~~aLl~~-------------------------------------------~~---a-~pklII~~~S~--~~~~~d~ 140 (337)
..++.+++++ +. . ++++|++..-. .+...|+
T Consensus 99 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l 178 (393)
T 1vjo_A 99 EATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPL 178 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred HHHHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccH
Confidence 8888888654 00 1 36777776322 4677899
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhc---cCC-------
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNA---VFP------- 192 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~---~~p------- 192 (337)
++|.++|+++|+++++|++|..|... .++++.+| | |+++. ++.+.+... +.+
T Consensus 179 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (393)
T 1vjo_A 179 EGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNL 258 (393)
T ss_dssp TTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHH
T ss_pred HHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHh
Confidence 99999999999999999999977554 12333322 2 55554 465555321 111
Q ss_pred --------CC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC--CCeEEEEEecCCC
Q psy10669 193 --------SL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT--DVHLILIDLRKNK 261 (337)
Q Consensus 193 --------~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t--~~h~v~V~~~~~~ 261 (337)
.. .|+++++.++++..++..+.+...++.++++.++.++|.+.|.+.|+++..... ..+++.+.+.. +
T Consensus 259 ~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~ 337 (393)
T 1vjo_A 259 LGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPD-G 337 (393)
T ss_dssp HHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCT-T
T ss_pred hhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCC-C
Confidence 11 238889999999988887644345788999999999999999998988865211 24566776632 4
Q ss_pred cchHHHHHHHhhc-CceeccCc------ccchh
Q psy10669 262 LTGSKVELVLEEI-AIACNKNT------GISLA 287 (337)
Q Consensus 262 ~~~~~~~~~L~~~-gI~v~~~~------girig 287 (337)
.+..++.+.|.+. ||.+.+.. .+||+
T Consensus 338 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis 370 (393)
T 1vjo_A 338 VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVG 370 (393)
T ss_dssp CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEE
T ss_pred CCHHHHHHHHHhhCCEEEecCccccCCCEEEEe
Confidence 5677888888775 99987532 67887
No 42
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.51 E-value=3.6e-12 Score=121.12 Aligned_cols=243 Identities=9% Similarity=0.030 Sum_probs=164.8
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchh
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPA 108 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~A 108 (337)
...+.+.+.-..++|.|.+++...+.+ .+ + ....++....++.+++++|.+.+ ..|.+ .||+.|
T Consensus 22 ~~~~~~~p~p~~~~~~v~~a~~~~~~~--------~~-~---~~~~~~~~~l~~~la~~~~~~~~---~~v~~~~gg~~a 86 (393)
T 3kgw_A 22 PTRLLLGPGPSNLAPRVLAAGSLRMIG--------HM-Q---KEMLQIMEEIKQGIQYVFQTRNP---LTLVVSGSGHCA 86 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTCCCCC--------TT-S---HHHHHHHHHHHHHHHHHHTCCCS---EEEEESCCTTTH
T ss_pred ccceeccCCCCCCCHHHHHHhcccccC--------cc-c---HHHHHHHHHHHHHHHHHhCCCCC---cEEEEeCCcHHH
Confidence 456778888888899999999753211 11 1 12234444556789999998764 23555 556899
Q ss_pred HHHHHHhhCCc-------------------------------------------cc---c-cccEEEEcCcc--cccccC
Q psy10669 109 NFAVCEKALPT-------------------------------------------NN---A-RFDFLSSGTTC--YSRCLD 139 (337)
Q Consensus 109 N~~v~~aLl~~-------------------------------------------~~---a-~pklII~~~S~--~~~~~d 139 (337)
+..++.+++++ +. . ++++|++.... .+...|
T Consensus 87 l~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~ 166 (393)
T 3kgw_A 87 METALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP 166 (393)
T ss_dssp HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred HHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc
Confidence 98888888754 00 1 36877776333 468888
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhccCC---------
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNAVFP--------- 192 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~~~p--------- 192 (337)
+++|.++|+++|+++++|++|+.|... .++++ +| .| |+++. ++.+.+.....+
T Consensus 167 l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
T 3kgw_A 167 LDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDIT 246 (393)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHH
Confidence 999999999999999999999977544 12233 23 12 44443 465655432111
Q ss_pred -------------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC--C-CCeEEEEE
Q psy10669 193 -------------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG--T-DVHLILID 256 (337)
Q Consensus 193 -------------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t-~~h~v~V~ 256 (337)
...++++.+.++++..++..+.+...++..+++.++.++|.+.|.+.|+++.... . -..++.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 326 (393)
T 3kgw_A 247 YLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVT 326 (393)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEE
T ss_pred HHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEe
Confidence 1246788999999988888775444688999999999999999999999886311 1 13445565
Q ss_pred ecCCCcchHHHHHHHhhc-CceeccCc------ccchhh
Q psy10669 257 LRKNKLTGSKVELVLEEI-AIACNKNT------GISLAA 288 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~~-gI~v~~~~------girig~ 288 (337)
+.. +.+..++.+.|.+. ||.+.... .+||+.
T Consensus 327 ~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~ 364 (393)
T 3kgw_A 327 VPA-GYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGL 364 (393)
T ss_dssp CCT-TBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEEC
T ss_pred CCC-CCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEe
Confidence 533 45777888887764 99998632 578774
No 43
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.49 E-value=4.5e-13 Score=140.00 Aligned_cols=202 Identities=12% Similarity=0.076 Sum_probs=143.3
Q ss_pred HHHHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhCCc---------------------------------------
Q psy10669 80 VAQQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKALPT--------------------------------------- 119 (337)
Q Consensus 80 ~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl~~--------------------------------------- 119 (337)
.++++++++||++. .+.+++|+ .||.+++.+++++
T Consensus 177 e~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~ 251 (730)
T 1c4k_A 177 AAEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFI 251 (730)
T ss_dssp HHHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCE
T ss_pred HHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccCcc
Confidence 44578999999985 57788885 8999999999764
Q ss_pred ------cc-----c-----c------c----cEEEEcCcc-cccccChHHHHHHhhhcCCeEEEecccccccc-------
Q psy10669 120 ------NN-----A-----R------F----DFLSSGTTC-YSRCLDYARFRQICDETDSIMFADMSHISGLI------- 165 (337)
Q Consensus 120 ------~~-----a-----~------p----klII~~~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli------- 165 (337)
.+ . + + |+|+++.++ ++...|+++|.++|+++|++|++|+||..++.
T Consensus 252 g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g 331 (730)
T 1c4k_A 252 GGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRN 331 (730)
T ss_dssp EEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGG
T ss_pred CCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCC
Confidence 11 1 1 1 667666444 57889999999999999999999999975321
Q ss_pred ---------c------eeeeec-c------CCchhhh--h-H--------HHHHhhccCCCCCCCCcHHHHHHHHHHHHH
Q psy10669 166 ---------A------GVKGVT-K------TGEKILY--D-Y--------EEKINNAVFPSLQGGPHNHAIGAIATAMLQ 212 (337)
Q Consensus 166 ---------~------g~~~T~-~------~Gg~i~~--~-l--------~~~i~~~~~p~~~g~~~~~~iaala~a~~e 212 (337)
+ .+++|. | .||++.. + + ..+++........++|+++.++|+.+|+..
T Consensus 332 ~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~ 411 (730)
T 1c4k_A 332 SSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAM 411 (730)
T ss_dssp GCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 1 122332 2 2456621 1 1 234444322233678999999999999988
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecCCC------------------------------------CC----
Q psy10669 213 AQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTGGT------------------------------------DV---- 250 (337)
Q Consensus 213 ~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~~t------------------------------------~~---- 250 (337)
+..+.+.++.++++++++++++.|.+ .|+++....+ ++
T Consensus 412 l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i 491 (730)
T 1c4k_A 412 QEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYV 491 (730)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEE
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCccccc
Confidence 75436788999999999999999998 7999864211 22
Q ss_pred --eEEEEEe----------cCCCcchHHHHHHHhhcCceeccCc--ccch
Q psy10669 251 --HLILIDL----------RKNKLTGSKVELVLEEIAIACNKNT--GISL 286 (337)
Q Consensus 251 --h~v~V~~----------~~~~~~~~~~~~~L~~~gI~v~~~~--giri 286 (337)
..+.+.+ ...++++.++.+.|.+.||.+++.. .+|+
T Consensus 492 dp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~ 541 (730)
T 1c4k_A 492 DPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILF 541 (730)
T ss_dssp CTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEE
T ss_pred CCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEE
Confidence 1255665 3346789999999998899998754 5555
No 44
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.49 E-value=1.2e-13 Score=143.66 Aligned_cols=198 Identities=20% Similarity=0.155 Sum_probs=143.0
Q ss_pred HHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc----------------------------c--------
Q psy10669 78 EIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------N-------- 120 (337)
Q Consensus 78 E~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------~-------- 120 (337)
-..++++++++||+++ .+.+++| +.||.+++.+++++ .
T Consensus 197 i~eaE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi 271 (715)
T 3n75_A 197 HKEAEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (715)
T ss_dssp HHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCC
T ss_pred HHHHHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccc
Confidence 3456689999999986 5777888 58999999999875 0
Q ss_pred ---c------c--------c-c--c----EEEEcCcccccccChHHHHHHhhhcCCeEEEecccccccc-c---------
Q psy10669 121 ---N------A--------R-F--D----FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-A--------- 166 (337)
Q Consensus 121 ---~------a--------~-p--k----lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-~--------- 166 (337)
. . + | | +||+.++.++...|+++|.++|++++ ++||+||++|+. +
T Consensus 272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al 349 (715)
T 3n75_A 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGM 349 (715)
T ss_dssp BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTT
T ss_pred ccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccccccc
Confidence 0 0 0 2 3 44445656689999999999998763 899999998762 1
Q ss_pred --e-----e---e-eecc------CCchhhh--h-HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH
Q psy10669 167 --G-----V---K-GVTK------TGEKILY--D-YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226 (337)
Q Consensus 167 --g-----~---~-~T~~------~Gg~i~~--~-l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~ 226 (337)
+ + + |+|| +||++.. + ..++++.+.....+++|+++.+||+.+|+..+...++++++++++
T Consensus 350 ~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~ 429 (715)
T 3n75_A 350 SGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSI 429 (715)
T ss_dssp SSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred ccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 1 1 2 3333 3567654 2 244566654444478999999999999998885346788999999
Q ss_pred HHHHHHHHHHHhC-----C--CEEecCC----------------------------CCCeEEEEEecCC---------Cc
Q psy10669 227 ANASHLSDEMIKR-----G--YHVVTGG----------------------------TDVHLILIDLRKN---------KL 262 (337)
Q Consensus 227 ~na~~l~~~L~~~-----G--~~v~~~~----------------------------t~~h~v~V~~~~~---------~~ 262 (337)
+++++|++.|.+. | |++.... .|.--+.|++... |+
T Consensus 430 ~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi 509 (715)
T 3n75_A 430 ERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGI 509 (715)
T ss_dssp HHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCC
T ss_pred HHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCC
Confidence 9999999999873 3 4554310 2344566776543 67
Q ss_pred chHHHHHHHhhcCceeccCc
Q psy10669 263 TGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 263 ~~~~~~~~L~~~gI~v~~~~ 282 (337)
+|.++.++|+++||.+.+..
T Consensus 510 ~g~~~~~~L~~~~I~~E~~d 529 (715)
T 3n75_A 510 PASIVAKYLDEHGIVVEKTG 529 (715)
T ss_dssp CHHHHHHHHHHTTCCCSEEE
T ss_pred cHHHHHHHHHHCCCEEEecC
Confidence 88999999999999998755
No 45
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.49 E-value=1e-13 Score=136.52 Aligned_cols=246 Identities=13% Similarity=0.081 Sum_probs=154.4
Q ss_pred hhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhh-ccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQN-KYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF 89 (337)
Q Consensus 11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~-~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf 89 (337)
+.+..+++.+.+++|.+++...+..++.+| .+.|++++...... ....+..|-+| +....+++| +.++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~~~~~~g~~y--~~~~~~~l~----~~la~~~ 78 (431)
T 3ht4_A 7 NGEKIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSHFIPTTGYGY--DDIGRDTLE----KVYADVF 78 (431)
T ss_dssp TTTTSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGSCCCCTTCC--SCHHHHHHH----HHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhhcCCCCCCCC--ChhhHHHHH----HHHHHHh
Confidence 345566777777788889999999999999 67898888753211 11111222222 222234455 6889999
Q ss_pred CCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------c------------------------------
Q psy10669 90 NLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------N------------------------------ 120 (337)
Q Consensus 90 g~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------~------------------------------ 120 (337)
|.+... +.++++||+.||..++.+++++ .
T Consensus 79 g~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e 156 (431)
T 3ht4_A 79 GAEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFE 156 (431)
T ss_dssp TCSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHH
T ss_pred CCCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHH
Confidence 998621 1234789999999999988643 0
Q ss_pred -c-----ccccEEEEcCc---ccccc---cChHHHHHHhhh--cCCeEEEeccccccccc---------eeeeec-c---
Q psy10669 121 -N-----ARFDFLSSGTT---CYSRC---LDYARFRQICDE--TDSIMFADMSHISGLIA---------GVKGVT-K--- 173 (337)
Q Consensus 121 -~-----a~pklII~~~S---~~~~~---~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~~T~-~--- 173 (337)
+ .++++|++..| ..++. .|+++|.++|++ +|++|++|++|..+... .+++|. |
T Consensus 157 ~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lg 236 (431)
T 3ht4_A 157 AVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPG 236 (431)
T ss_dssp HHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGG
T ss_pred HHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCC
Confidence 0 02578887642 23344 455667788999 99999999999988753 133333 2
Q ss_pred -----CCchhhh--hHHHHHhhcc-CCCCC--CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE
Q psy10669 174 -----TGEKILY--DYEEKINNAV-FPSLQ--GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV 243 (337)
Q Consensus 174 -----~Gg~i~~--~l~~~i~~~~-~p~~~--g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v 243 (337)
.||+++. ++.+.+.... .|++. .++.+.....+..++. ..+.+.++..+|++++++.|++.|+++
T Consensus 237 g~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~a~~l~~~L~~~g~~v 311 (431)
T 3ht4_A 237 GGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF-----LAPHVAGQALKGAIFTAAFLEKLGMNT 311 (431)
T ss_dssp TTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhh-----hHHHHHHHHHHHHHHHHHHHHhCcCEe
Confidence 3677765 5666655422 22321 1221111122222222 235778899999999999999999998
Q ss_pred ecCCCCCe-----EEEEEecCCCcchHHHHHHHhhc
Q psy10669 244 VTGGTDVH-----LILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 244 ~~~~t~~h-----~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
.. ..+| ++.|.+++.. ....+.+.|.+.
T Consensus 312 ~p--~~~~~~~~li~~i~l~~~~-~~~~~~~~l~~~ 344 (431)
T 3ht4_A 312 SP--AWNAPRTDLIQSVQFDDKD-RMIAFCQAIQYA 344 (431)
T ss_dssp ES--CTTSCCSSSCCEEECCCHH-HHHHHHHHHHHT
T ss_pred cC--CCCCCCccEEEEEEeCCHH-HHHHHHHHHHhc
Confidence 64 3555 8888886422 445566666653
No 46
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.49 E-value=8.5e-13 Score=125.55 Aligned_cols=239 Identities=13% Similarity=0.070 Sum_probs=160.4
Q ss_pred CCCHHHHHHHhhhhhhccCCCCCC-CcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh-C
Q psy10669 41 FTSLAVLECLGSCLQNKYSEGLPG-KRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA-L 117 (337)
Q Consensus 41 ~~~p~V~~a~~~~l~~~y~~g~~g-~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL-l 117 (337)
..++.|++++...+.... ...+. .+.|.. .......+++.+++++|.+. .++.+++| +.|+..++.++ +
T Consensus 27 ~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~~---~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~~~~~~~~~~ 98 (390)
T 1elu_A 27 ILPTVALEAITAMYGYLQ-ENGPFSIAANQH---IQQLIAQLRQALAETFNVDP----NTITITDNVTTGCDIVLWGLDW 98 (390)
T ss_dssp CCCHHHHHHHHHHHHHHH-HHCSSSHHHHHH---HHHHHHHHHHHHHHHTTSCG----GGEEEESSHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHHHh-ccCCcchhhHHH---HHHHHHHHHHHHHHHcCCCH----HHEEEeCChHHHHHHHHhCCCC
Confidence 347889999987655421 11111 112221 11333345578999999875 24666554 88998888888 5
Q ss_pred Cc----------------------------------c-----------c--c---cccEEEEcCcc--cccccChHHHHH
Q psy10669 118 PT----------------------------------N-----------N--A---RFDFLSSGTTC--YSRCLDYARFRQ 145 (337)
Q Consensus 118 ~~----------------------------------~-----------~--a---~pklII~~~S~--~~~~~d~~~l~e 145 (337)
++ . + + ++++|++..-. .+...|+++|.+
T Consensus 99 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~ 178 (390)
T 1elu_A 99 HQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMA 178 (390)
T ss_dssp CTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHH
T ss_pred CCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHH
Confidence 53 0 0 0 15777776333 368889999999
Q ss_pred Hhh----hcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhccC------------
Q psy10669 146 ICD----ETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNAVF------------ 191 (337)
Q Consensus 146 ia~----~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~~~------------ 191 (337)
+|+ ++|+++++|++|+.|... .++++.+| | |+++. ++.+.+.+...
T Consensus 179 l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 258 (390)
T 1elu_A 179 VCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGE 258 (390)
T ss_dssp HHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSC
T ss_pred HHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCcccccccCc
Confidence 999 999999999999987654 13344433 4 55544 35444443211
Q ss_pred ---------CCCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecC
Q psy10669 192 ---------PSLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRK 259 (337)
Q Consensus 192 ---------p~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~ 259 (337)
....++++++.++++..++..+...+ .++.++++.++.++|.+.|.+. |+++... .+...++.+.+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~ 338 (390)
T 1elu_A 259 PTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDS 338 (390)
T ss_dssp EEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECS
T ss_pred ccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCC
Confidence 11246788888888888887765434 6788999999999999999996 9988742 3566777787753
Q ss_pred CCcchHHHHHHHhhcCceeccCc---ccchhh
Q psy10669 260 NKLTGSKVELVLEEIAIACNKNT---GISLAA 288 (337)
Q Consensus 260 ~~~~~~~~~~~L~~~gI~v~~~~---girig~ 288 (337)
+.+..++.+.|.+.||.+.+.. .|||+.
T Consensus 339 -~~~~~~~~~~l~~~gi~v~~~~~~~~iRis~ 369 (390)
T 1elu_A 339 -PLGHRAIVQKLEEQRIYLRTIADPDCIRACC 369 (390)
T ss_dssp -SSCHHHHHHHHHHTTEECEEETTTTEEEEEC
T ss_pred -CCCHHHHHHHHHHCCEEEEecCCCCeEEEec
Confidence 4577888888988899987642 688875
No 47
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.48 E-value=4.2e-12 Score=121.88 Aligned_cols=235 Identities=8% Similarity=0.007 Sum_probs=156.2
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a 115 (337)
++....+|.|++++...+.+. .+++++++..|. ........+++.+++++|.+. .+|.+++| +.++..++.+
T Consensus 33 ~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~al~~~~~~ 105 (406)
T 3cai_A 33 PAGMLIPDSVATTVSTAFRRS--GASTVGAHPSAR-RSAAVLDAAREAVADLVNADP----GGVVLGADRAVLLSLLAEA 105 (406)
T ss_dssp GGCCCCCHHHHHHHHHHHHHC--CSSSCSSSHHHH-HHHHHHHHHHHHHHHHHTCCG----GGEEEESCHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhc--CCCCCCccHHHH-HHHHHHHHHHHHHHHHhCCCC----CeEEEeCChHHHHHHHHHH
Confidence 334467999999998775542 234443332221 123334445678999999874 25777777 6677666666
Q ss_pred h---CCc----------------------------------c----------c--c---cccEEEEcCcc--cccccChH
Q psy10669 116 A---LPT----------------------------------N----------N--A---RFDFLSSGTTC--YSRCLDYA 141 (337)
Q Consensus 116 L---l~~----------------------------------~----------~--a---~pklII~~~S~--~~~~~d~~ 141 (337)
+ +++ . + + ++++|++..-. .+...|++
T Consensus 106 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~ 185 (406)
T 3cai_A 106 SSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLR 185 (406)
T ss_dssp TGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCH
T ss_pred HhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHH
Confidence 6 332 0 0 0 15777776322 36888999
Q ss_pred HHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CCc-hhhh--hHHHHHhhccC--C------CCCC
Q psy10669 142 RFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TGE-KILY--DYEEKINNAVF--P------SLQG 196 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~Gg-~i~~--~l~~~i~~~~~--p------~~~g 196 (337)
+|.++|+++|+++++|++|..|... .++++. | .+| +++. ++.+.+.+... . ...+
T Consensus 186 ~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 265 (406)
T 3cai_A 186 AMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPPIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIG 265 (406)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCSCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCS
T ss_pred HHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCCcCeEEEEehHHHhhcCCcccCCCCCccccccCC
Confidence 9999999999999999999988764 123332 2 245 7665 45555543311 0 1257
Q ss_pred CCcHHHHHHHHHHHHHHhch--------------hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC-CCCeEEEEEecCC
Q psy10669 197 GPHNHAIGAIATAMLQAQSD--------------EFKSYQAQVKANASHLSDEMIKR-GYHVVTGG-TDVHLILIDLRKN 260 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~--------------~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~-t~~h~v~V~~~~~ 260 (337)
+++++.++++..++..+.+. .+++.++++.++.++|.+.|.+. |+++.... ....++.+.+.
T Consensus 266 t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-- 343 (406)
T 3cai_A 266 VHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVH-- 343 (406)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEET--
T ss_pred CccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEEC--
Confidence 88999998888888776431 25778889999999999999984 88876521 22445556554
Q ss_pred CcchHHHHHHHhhcCceecc
Q psy10669 261 KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 261 ~~~~~~~~~~L~~~gI~v~~ 280 (337)
+.+..++.+.|.+.||.+..
T Consensus 344 ~~~~~~~~~~L~~~gi~v~~ 363 (406)
T 3cai_A 344 KVPADRVVQRLADNGILAIA 363 (406)
T ss_dssp TBCHHHHHHHHHHTTEECEE
T ss_pred CcCHHHHHHHHHHCCcEEec
Confidence 45678888899889999875
No 48
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.48 E-value=4.1e-13 Score=130.53 Aligned_cols=245 Identities=13% Similarity=0.036 Sum_probs=148.9
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCC---cCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-C-CCc
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGK---RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-Y-SGS 106 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~---r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~-Sgt 106 (337)
...+.|.--.++|.|++++...+.+.+ |++.+ -.+.+. ...++-+.+|++++++||++++ ..|.| + +||
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~~-~~~~~~~~ar~~la~ll~~~~~---~evif~t~~~T 101 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRGK-EFIQVAEEAEQDFRDLLNIPSN---YKVLFCHGGGR 101 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC--------------------------CCHHHHHHHHHHHTCCTT---EEEEEEESCTT
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCCH-HHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCCch
Confidence 456778888889999999988766543 33333 122232 3344555788999999999642 25777 3 558
Q ss_pred hhHHHHHHhhCCc-------------------------------c-------c-------c---cccEEEEcCccc--cc
Q psy10669 107 PANFAVCEKALPT-------------------------------N-------N-------A---RFDFLSSGTTCY--SR 136 (337)
Q Consensus 107 ~AN~~v~~aLl~~-------------------------------~-------~-------a---~pklII~~~S~~--~~ 136 (337)
.+|..++.+++++ . . + ++++|.+.+... +.
T Consensus 102 ~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~ 181 (386)
T 3qm2_A 102 GQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAPQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGI 181 (386)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTE
T ss_pred HHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhCCeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCE
Confidence 8877777888653 1 0 0 156777765444 66
Q ss_pred c-cChHHHHHHhhhcCCeEEEeccccccccc------e-eeeec-----cCC-chhh-h-hHHHHHhh-----------c
Q psy10669 137 C-LDYARFRQICDETDSIMFADMSHISGLIA------G-VKGVT-----KTG-EKIL-Y-DYEEKINN-----------A 189 (337)
Q Consensus 137 ~-~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g-~~~T~-----~~G-g~i~-~-~l~~~i~~-----------~ 189 (337)
. .|+++| + +|++++||++|++|.+. + +.++. |+| |++. . ++.+++.+ .
T Consensus 182 ~i~pi~~i---~--~g~~~~vDa~qs~g~~pidv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~ 256 (386)
T 3qm2_A 182 AIDETPDF---G--PEVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLN 256 (386)
T ss_dssp ECCCCCCC---C--TTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHH
T ss_pred ecCchhhh---c--CCCEEEEEcccccCCCCCCccccCEEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHh
Confidence 4 566655 4 69999999999999987 2 23333 345 4443 2 22111110 0
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEe-cCC--CCCeEEEEEecCCCcchH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVV-TGG--TDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~-~~~--t~~h~v~V~~~~~~~~~~ 265 (337)
-.+...+||+.+.++++..|+.++.+. ..++..++..+++++|.+.|.+.|+-.. ... .-.+++.+.+...+++ .
T Consensus 257 ~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~-~ 335 (386)
T 3qm2_A 257 DNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD-K 335 (386)
T ss_dssp HC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH-H
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc-H
Confidence 012335799999999999999998765 5788999999999999999999876222 111 1234666666544555 4
Q ss_pred HHHHHHhhcCceeccC----cccchhh
Q psy10669 266 KVELVLEEIAIACNKN----TGISLAA 288 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~~----~girig~ 288 (337)
.+-..|++.||.+.+- .++|++.
T Consensus 336 ~~~~~L~~~gI~~~~g~~~~~~iRiS~ 362 (386)
T 3qm2_A 336 VFLEESFAAGLHALKGHRVVGGMRASI 362 (386)
T ss_dssp HHHHHHHHTTEECCBCCTTTCSEEEEC
T ss_pred HHHHHHHHCCCEEeCCCCCcCeEEEEc
Confidence 5556688899998653 2788874
No 49
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=8.9e-12 Score=118.20 Aligned_cols=232 Identities=12% Similarity=0.076 Sum_probs=150.1
Q ss_pred CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHHHHHhhC--
Q psy10669 41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFAVCEKAL-- 117 (337)
Q Consensus 41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~v~~aLl-- 117 (337)
..+|.|.+++...+.+.+ +++. .| ....+++..+++.+++++|++. .++.++ ||+.||..++.++.
T Consensus 41 ~~~~~v~~a~~~~~~~~~--~~~~--~~---~~~~~~~~~l~~~la~~~~~~~----~~i~~~~ggt~a~~~~~~~~~~~ 109 (397)
T 3f9t_A 41 NVLPITRKIVDIFLETNL--GDPG--LF---KGTKLLEEKAVALLGSLLNNKD----AYGHIVSGGTEANLMALRCIKNI 109 (397)
T ss_dssp CCCTHHHHHHHHHTTCCT--TSGG--GB---HHHHHHHHHHHHHHHHHTTCTT----CEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhcC--CCcc--cC---hhHHHHHHHHHHHHHHHhCCCC----CCEEEecCcHHHHHHHHHHHHHH
Confidence 348999999987654322 2221 12 2345666667789999999986 355554 45889888877763
Q ss_pred -------------Cc-------------------------------------cc-----c-cccEEEEc-Ccc-cccccC
Q psy10669 118 -------------PT-------------------------------------NN-----A-RFDFLSSG-TTC-YSRCLD 139 (337)
Q Consensus 118 -------------~~-------------------------------------~~-----a-~pklII~~-~S~-~~~~~d 139 (337)
++ .+ . ++++|++. +++ .+...|
T Consensus 110 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~ 189 (397)
T 3f9t_A 110 WREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN 189 (397)
T ss_dssp HHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC
T ss_pred HHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC
Confidence 11 00 1 35666655 333 457889
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc----------------------eeeeeccC--------Cchhhh--hHHHHHh
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA----------------------GVKGVTKT--------GEKILY--DYEEKIN 187 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~----------------------g~~~T~~~--------Gg~i~~--~l~~~i~ 187 (337)
+++|.++|+++|+++++|++|..|.++ .+.++.+| |++++. .+.+.+.
T Consensus 190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~ 269 (397)
T 3f9t_A 190 IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLD 269 (397)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTC
T ss_pred HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCceEEEEeCHHHHHhhc
Confidence 999999999999999999999866442 11222222 223333 2433332
Q ss_pred hccCCCCC--------CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669 188 NAVFPSLQ--------GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 188 ~~~~p~~~--------g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~ 259 (337)
.. .|.+. ++.....+++..+++..+....+++..+++.++.++|.+.|.+.|++++.. ...+++++.+..
T Consensus 270 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~ 347 (397)
T 3f9t_A 270 VD-APYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENNFKPVIE-PILNIVAIEDED 347 (397)
T ss_dssp EE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC-CSSSEEEEECTT
T ss_pred cC-CccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcC-CCccEEEEEeCC
Confidence 21 22221 344444566666666655555678899999999999999999999986643 456677666542
Q ss_pred CCcchHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669 260 NKLTGSKVELVLEEIAIACNKNT---GISLAAE 289 (337)
Q Consensus 260 ~~~~~~~~~~~L~~~gI~v~~~~---girig~~ 289 (337)
..++.+.|.+.||.+.... .+||+..
T Consensus 348 ----~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~ 376 (397)
T 3f9t_A 348 ----YKEVCKKLRDRGIYVSVCNCVKALRIVVM 376 (397)
T ss_dssp ----HHHHHHHHHHTTCBCEECSSSSEEEEECC
T ss_pred ----HHHHHHHHHhCCeEEeccCCCCEEEEEEc
Confidence 5677888888899987654 7888754
No 50
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.47 E-value=4.2e-12 Score=120.95 Aligned_cols=244 Identities=12% Similarity=0.101 Sum_probs=159.9
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG- 105 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg- 105 (337)
.-|.|...++-. +|.|.+++...+.+. ..+++.. ..+++....+.+++.+| .+. .+|.+++|
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~l~~~la~~l~~~~g~~~~~----~~i~~~~g~ 94 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYESV--------PAEYYKAVADWEEIEHRARPKE----DWCVFASGV 94 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBCC--------CHHHHHHHHHHHHHHHSCCCCG----GGEEEESCH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCCC--------CHHHHHHHHHHHHHHhCCCCCH----HHEEECCCH
Confidence 567777666544 899999998765431 1122111 24566555678888888 443 25777777
Q ss_pred chhHHHHHHhhCCc----------------------------------------------cc--ccccEEEEcCccc--c
Q psy10669 106 SPANFAVCEKALPT----------------------------------------------NN--ARFDFLSSGTTCY--S 135 (337)
Q Consensus 106 t~AN~~v~~aLl~~----------------------------------------------~~--a~pklII~~~S~~--~ 135 (337)
+.|+..++.+++++ .+ .++++|++....+ +
T Consensus 95 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG 174 (391)
T 3dzz_A 95 VPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIG 174 (391)
T ss_dssp HHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTT
T ss_pred HHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCC
Confidence 78888888998754 00 1267776653332 3
Q ss_pred cc---cChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c----CC---chhhh---hHH
Q psy10669 136 RC---LDYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K----TG---EKILY---DYE 183 (337)
Q Consensus 136 ~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~----~G---g~i~~---~l~ 183 (337)
.. .|+++|.++|+++|+++++|++|..+...| ++++. | .| |+++. ++.
T Consensus 175 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 254 (391)
T 3dzz_A 175 YAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLR 254 (391)
T ss_dssp BCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHH
T ss_pred cccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHH
Confidence 45 467778889999999999999998533321 12232 2 22 66653 466
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCC
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
+.+..........+++++..+++..++... ....++.++++.++.++|.+.|.+. |+++... ..+..+++++...+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~ 332 (391)
T 3dzz_A 255 ARAEESFFLAGIGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDS-NASYLAWVDISALG 332 (391)
T ss_dssp HHHHHHHHHHTCSSCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC-CBSSEEEEECGGGC
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecc-CceEEEEEehhhcC
Confidence 655543222223457777778777777663 2345788899999999999999984 9988752 34555668887666
Q ss_pred cchHHHHHHH-hhcCceeccCc--------ccchhhh
Q psy10669 262 LTGSKVELVL-EEIAIACNKNT--------GISLAAE 289 (337)
Q Consensus 262 ~~~~~~~~~L-~~~gI~v~~~~--------girig~~ 289 (337)
.+..++.+.| ++.||.+.+.. .+||+..
T Consensus 333 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~ 369 (391)
T 3dzz_A 333 MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA 369 (391)
T ss_dssp SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence 6788888888 58899998632 4677543
No 51
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.47 E-value=9.3e-12 Score=119.14 Aligned_cols=250 Identities=12% Similarity=0.070 Sum_probs=152.5
Q ss_pred HHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CC
Q psy10669 17 ELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LD 92 (337)
Q Consensus 17 ~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~ 92 (337)
++++...+.....+..|.|...++-. +|.|.+++...+.+. ..+++. ..-..++.....+.+.+.+| .+
T Consensus 18 ~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~ 90 (391)
T 3h14_A 18 DVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETD-ALGYTV------ALGLPALRQRIARLYGEWYGVDLD 90 (391)
T ss_dssp HHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC------CCChHHHHHHHHHHHHHHhCCCCC
Confidence 44555444444455678888777766 789999998765431 112221 11123444333344555556 33
Q ss_pred CCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccccccEEE
Q psy10669 93 PEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNARFDFLS 128 (337)
Q Consensus 93 ~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a~pklII 128 (337)
. .+|.+++| +.|+..++.+++++ +.+++++|+
T Consensus 91 ~----~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~v~ 166 (391)
T 3h14_A 91 P----GRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAGLM 166 (391)
T ss_dssp G----GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTSCCSEEE
T ss_pred H----HHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhcCCeEEE
Confidence 3 25777666 78988888998764 001367777
Q ss_pred EcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhhh--
Q psy10669 129 SGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKILY-- 180 (337)
Q Consensus 129 ~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~~-- 180 (337)
+..-.+ +...| +++|.++|+++|+++++|++|...... .+++|. | .| |+++.
T Consensus 167 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 246 (391)
T 3h14_A 167 VASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPE 246 (391)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG
T ss_pred ECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCH
Confidence 653333 45565 667788999999999999999854432 123333 2 12 56554
Q ss_pred hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC
Q psy10669 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN 260 (337)
Q Consensus 181 ~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~ 260 (337)
++.+.+.....+. ..++++...+++..++. .....++.++++.++.++|.+.|.+.|+.....+..+..+++++...
T Consensus 247 ~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 323 (391)
T 3h14_A 247 DQVRVVERIAQNM-FICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDL 323 (391)
T ss_dssp GGHHHHHHHHHHT-TCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTT
T ss_pred HHHHHHHHHHhhh-ccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCcc
Confidence 4666555443222 33556666666655554 22445788889999999999999998876543334456777888765
Q ss_pred CcchHHHHHHHh-hcCceecc
Q psy10669 261 KLTGSKVELVLE-EIAIACNK 280 (337)
Q Consensus 261 ~~~~~~~~~~L~-~~gI~v~~ 280 (337)
+.++.++.+.|. ++||.+.+
T Consensus 324 ~~~~~~~~~~l~~~~gi~v~~ 344 (391)
T 3h14_A 324 TDDSRAFAAEILEKAGVAVTP 344 (391)
T ss_dssp CSCHHHHHHHHHHHHCEECEE
T ss_pred CCCHHHHHHHHHHHCCEEEcC
Confidence 567777777755 46999975
No 52
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.46 E-value=1.2e-12 Score=124.11 Aligned_cols=246 Identities=13% Similarity=0.062 Sum_probs=159.1
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCc--cchHHHHHHHHHHHHHhhcCCCCCCCcce-eecCC-Cc
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG--NQFIDEIEIVAQQRSLKAFNLDPEQWGCN-VQPYS-GS 106 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G--~~~~~~lE~~~~~~~a~lfg~~~~~~~~~-v~~~S-gt 106 (337)
+.+++.+....+||.|++++...+.+ | .+.+++++-.+ .....++...+++++++++|++.. .+ +.+++ |+
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~---~~~i~~t~g~t 78 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVD-Y-QHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTG---YKVLFIQGGAS 78 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSS-S-TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSS---EEEEEESSHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhh-h-hhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCC---cEEEEECCCch
Confidence 46788889888999999999876543 3 23322211111 112234445667899999999741 13 45644 48
Q ss_pred hhHHHHHHhhCCc-------------------------------c-------------cc---cccEEEEcCcc--cccc
Q psy10669 107 PANFAVCEKALPT-------------------------------N-------------NA---RFDFLSSGTTC--YSRC 137 (337)
Q Consensus 107 ~AN~~v~~aLl~~-------------------------------~-------------~a---~pklII~~~S~--~~~~ 137 (337)
.||..++.+++++ . ++ +||+|++...+ .++.
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~ 158 (362)
T 2c0r_A 79 TQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQ 158 (362)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEE
T ss_pred HHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhCCeEEEecccccccccCCCHHHcccCCCcCEEEEeCCcCcccee
Confidence 8998889998754 0 00 15666665322 3453
Q ss_pred -cChHHHHHHhhhcCCeEEEeccccccccc-------eeeeecc-----CC-chhhh--hHHHHHhhc---cC-------
Q psy10669 138 -LDYARFRQICDETDSIMFADMSHISGLIA-------GVKGVTK-----TG-EKILY--DYEEKINNA---VF------- 191 (337)
Q Consensus 138 -~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~~-----~G-g~i~~--~l~~~i~~~---~~------- 191 (337)
.|+++ | +|+++++|++|..|... .++++.+ .| |+++. ++.+.+.+. .+
T Consensus 159 ~~~l~~---i---~~~~vivD~a~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~ 232 (362)
T 2c0r_A 159 FKAFPD---T---GSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVK 232 (362)
T ss_dssp CSSCCC---C---TTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHH
T ss_pred cccccc---c---CCCEEEEEChhhccCCccchhHCcEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHHHhh
Confidence 34444 4 79999999999998764 2334433 35 66654 444333321 00
Q ss_pred -CCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-C-EEecCC--CCCeEEEEEecCCCcchH
Q psy10669 192 -PSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-Y-HVVTGG--TDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 192 -p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~-~v~~~~--t~~h~v~V~~~~~~~~~~ 265 (337)
....++++.+.++++..++..+.+. ..++.+++..+++++|.+.|.+.| + ++.... ...+++++.+.. +.++.
T Consensus 233 ~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 311 (362)
T 2c0r_A 233 NNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-EELEK 311 (362)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-HHHHH
T ss_pred ccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-cchHH
Confidence 1224689999999999999887543 468899999999999999999988 6 775311 124556666643 34677
Q ss_pred HHHHHHhhcCceeccCc----ccchhh
Q psy10669 266 KVELVLEEIAIACNKNT----GISLAA 288 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~~~----girig~ 288 (337)
++.+.|++.||.+.+.. +|||+.
T Consensus 312 ~~~~~L~~~gi~~~~g~~~~~~iRis~ 338 (362)
T 2c0r_A 312 EFVKASEQEGFVGLKGHRSVGGLRASI 338 (362)
T ss_dssp HHHHHHHHTTEESCBCCTTTCSEEEEC
T ss_pred HHHHHHHHCCCeeccCCCCCCEEEEEC
Confidence 88889998999876432 578764
No 53
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.46 E-value=7e-12 Score=119.77 Aligned_cols=242 Identities=12% Similarity=0.049 Sum_probs=160.5
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN 109 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN 109 (337)
+.+++.+.-..++|.|.+++...+.+. | +...+.....+++.+++++|.++. .++.+++| +.|+
T Consensus 18 ~~~~~~~~p~~~~~~v~~a~~~~~~~~----------~--~~~~~~~~~~l~~~la~~~~~~~~---~~v~~~~g~t~al 82 (396)
T 2ch1_A 18 EKIMMGPGPSNCSKRVLTAMTNTVLSN----------F--HAELFRTMDEVKDGLRYIFQTENR---ATMCVSGSAHAGM 82 (396)
T ss_dssp CCBCCSSSSCCCCHHHHHHTTSCCCCT----------T--CHHHHHHHHHHHHHHHHHHTCCCS---CEEEESSCHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhccccccC----------C--ChhHHHHHHHHHHHHHHHhCCCCC---cEEEECCcHHHHH
Confidence 445555555566999999987543211 1 122334444566799999998762 14766665 7899
Q ss_pred HHHHHhhCCc-----------------------------------------cc-----c-cccEEEEcCc--ccccccCh
Q psy10669 110 FAVCEKALPT-----------------------------------------NN-----A-RFDFLSSGTT--CYSRCLDY 140 (337)
Q Consensus 110 ~~v~~aLl~~-----------------------------------------~~-----a-~pklII~~~S--~~~~~~d~ 140 (337)
..++.+++++ ++ . ++++|++..- ..+...|+
T Consensus 83 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 162 (396)
T 2ch1_A 83 EAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPL 162 (396)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred HHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCH
Confidence 8888988754 00 1 3677777532 24678889
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhc-------c-----
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNA-------V----- 190 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~-------~----- 190 (337)
++|.++|+++|+++++|++|..|... .++++ +| .| |+++. ++.+.+... .
T Consensus 163 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (396)
T 2ch1_A 163 EGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLL 242 (396)
T ss_dssp TTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHH
Confidence 99999999999999999999977543 12222 23 12 44433 344444321 0
Q ss_pred ----C------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC---CCeEEEEEe
Q psy10669 191 ----F------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT---DVHLILIDL 257 (337)
Q Consensus 191 ----~------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t---~~h~v~V~~ 257 (337)
+ ....++++.+.++++..++..+.+..+++.++++.++.+++.+.|.+.|+++..... ..+++.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 322 (396)
T 2ch1_A 243 LGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMI 322 (396)
T ss_dssp HHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEEC
T ss_pred HHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEc
Confidence 1 123467888888888888887654456788999999999999999988998875211 123666766
Q ss_pred cCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669 258 RKNKLTGSKVELVLEE-IAIACNKNT------GISLAA 288 (337)
Q Consensus 258 ~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~ 288 (337)
. .+.+..++.+.|.+ +||.+.... .+||+.
T Consensus 323 ~-~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~ 359 (396)
T 2ch1_A 323 P-KGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGI 359 (396)
T ss_dssp C-TTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEEC
T ss_pred C-CCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEEC
Confidence 4 35577888888865 699987632 678875
No 54
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.45 E-value=1.7e-11 Score=115.36 Aligned_cols=232 Identities=7% Similarity=-0.042 Sum_probs=159.4
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
++.|.|...+|.. +|.|++++...+.. ..++| .....++ ++.+++++|.+. .++.+++| +
T Consensus 16 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~-------~~~~~~l----~~~la~~~~~~~----~~i~~~~g~~ 78 (354)
T 3ly1_A 16 DNPIRINFNENPLGMSPKAQAAARDAVVK--ANRYA-------KNEILML----GNKLAAHHQVEA----PSILLTAGSS 78 (354)
T ss_dssp SSCEECSSCCCSSCCCHHHHHHHHHTGGG--TTSCC-------HHHHHHH----HHHHHHHTTSCG----GGEEEESHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHhh--CcCCC-------CCchHHH----HHHHHHHhCCCh----HHEEEeCChH
Confidence 4567787777775 89999999876542 11222 1122333 468899999865 35777666 7
Q ss_pred hhHHHHHHhhCCc-------------------------------------------cc---ccccEEEEcCcc--ccccc
Q psy10669 107 PANFAVCEKALPT-------------------------------------------NN---ARFDFLSSGTTC--YSRCL 138 (337)
Q Consensus 107 ~AN~~v~~aLl~~-------------------------------------------~~---a~pklII~~~S~--~~~~~ 138 (337)
.|+..++.+++++ .+ .++++|++.... .+...
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~ 158 (354)
T 3ly1_A 79 EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT 158 (354)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc
Confidence 8888888998654 01 236787775333 35788
Q ss_pred ChHHHHHHhhh--cCCeEEEeccccccccc-----------------eeeeec-c-------CCchhhh--hHHHHHhhc
Q psy10669 139 DYARFRQICDE--TDSIMFADMSHISGLIA-----------------GVKGVT-K-------TGEKILY--DYEEKINNA 189 (337)
Q Consensus 139 d~~~l~eia~~--~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~ 189 (337)
|.+++.+|++. +|+++++|++|..+... .++++. | ..|+++. ++.+.+...
T Consensus 159 ~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~ 238 (354)
T 3ly1_A 159 PADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRY 238 (354)
T ss_dssp CHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGG
T ss_pred CHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHh
Confidence 88888888777 99999999999853332 112232 2 1256554 577777766
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
..+ .+++++..+++..++... ...++.++++.++.++|.+.|.+.|+.+.. .....+++++.. +..++.+
T Consensus 239 ~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~ 308 (354)
T 3ly1_A 239 VAG---EKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLP--SEGNFVFHQLVV---PLKDYQT 308 (354)
T ss_dssp TTC---SCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CCSSEEEEECSS---CHHHHHH
T ss_pred cCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECC--CCceEEEEECCC---CHHHHHH
Confidence 444 467778887777776543 345788899999999999999998988764 455567787764 6778888
Q ss_pred HHhhcCceec-----cCcccchhh
Q psy10669 270 VLEEIAIACN-----KNTGISLAA 288 (337)
Q Consensus 270 ~L~~~gI~v~-----~~~girig~ 288 (337)
.|.+.||.+. ....+||+.
T Consensus 309 ~l~~~gi~v~g~~~~~~~~iRis~ 332 (354)
T 3ly1_A 309 HMADAGVLIGRAFPPADNWCRISL 332 (354)
T ss_dssp HHHHTTEECCCCCTTCTTEEEEEC
T ss_pred HHHHCCEEEeecCCCCCCEEEEEc
Confidence 8988999988 112678863
No 55
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.45 E-value=1.3e-11 Score=116.82 Aligned_cols=232 Identities=11% Similarity=0.067 Sum_probs=158.2
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
+..|.|-..+|.. +|.|++++...+.. + .++|. ....++ ++.+++++|.+. .++.+++| +
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~-~~y~~-------~~~~~l----r~~la~~~~~~~----~~v~~~~g~t 94 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSVE-T-EIYPD-------GWASSL----RKEVADFYQLEE----EELIFTAGVD 94 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBSC-C-CBC-----------CHHH----HHHHHHHHTCCG----GGEEEESSHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHHH-h-hcCCC-------cchHHH----HHHHHHHhCCCh----hhEEEeCCHH
Confidence 3567787777876 89999999765332 1 12221 112334 468889999865 25777666 7
Q ss_pred hhHHHHHHhhCCc---------------------------------------cc-----ccccEEEEcCcc--cccccCh
Q psy10669 107 PANFAVCEKALPT---------------------------------------NN-----ARFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 107 ~AN~~v~~aLl~~---------------------------------------~~-----a~pklII~~~S~--~~~~~d~ 140 (337)
.|+..++.+++++ .+ .++++|++..-. .+...|.
T Consensus 95 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~ 174 (363)
T 3ffh_A 95 ELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL 174 (363)
T ss_dssp HHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence 8888888888654 00 126777775333 4688899
Q ss_pred HHHHHHhhhc--CCeEEEeccccccccc---------------eeeeec-c----CC---chhhh--hHHHHHhhccCCC
Q psy10669 141 ARFRQICDET--DSIMFADMSHISGLIA---------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 141 ~~l~eia~~~--ga~l~vD~AH~~Gli~---------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~ 193 (337)
+++.+|++.+ |+++++|++|.-+..+ .+.+|. | .| |+++. ++.+.+.....+
T Consensus 175 ~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~- 253 (363)
T 3ffh_A 175 ADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPP- 253 (363)
T ss_dssp HHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCCS-
T ss_pred HHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCCC-
Confidence 9999998877 9999999999943221 123333 2 12 56654 577777665433
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
.+++....+++..++... ...++.++++.++.++|.+.|.+ .|+++.. ++...+++.+.. +..++.+.|.
T Consensus 254 --~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~~~~~~~~~~~~---~~~~~~~~l~ 324 (363)
T 3ffh_A 254 --FNTTSIGQKLAIEAIKDQ--AFIGECRTSNANGIKQYEAFAKRFEKVKLYP--ANGNFVLIDLGI---EAGTIFSYLE 324 (363)
T ss_dssp --CCCBHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHCTTCEECC--CCSSEEEEECSS---CHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHhhCCCceECC--CCCeEEEEECCC---CHHHHHHHHH
Confidence 367778888777777532 34578889999999999999999 8999875 445567787764 6788888888
Q ss_pred hcCceeccCc------ccchhh
Q psy10669 273 EIAIACNKNT------GISLAA 288 (337)
Q Consensus 273 ~~gI~v~~~~------girig~ 288 (337)
+.||.+.+.. .+||+.
T Consensus 325 ~~gi~v~~g~~~~~~~~iRis~ 346 (363)
T 3ffh_A 325 KNGYITRSGAALGFPTAVRITI 346 (363)
T ss_dssp HTTEECEETTTTTCTTEEEEEC
T ss_pred HCCeEEEeCccCCCCCeEEEEC
Confidence 8899988633 567753
No 56
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.45 E-value=3.6e-12 Score=122.71 Aligned_cols=237 Identities=12% Similarity=0.089 Sum_probs=154.9
Q ss_pred CCCCCHHHHHHHhhhhhhccCCCCCCC--cCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669 39 ENFTSLAVLECLGSCLQNKYSEGLPGK--RYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE 114 (337)
Q Consensus 39 en~~~p~V~~a~~~~l~~~y~~g~~g~--r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~ 114 (337)
....+|.|.+++...+...| |++.. ++..|. ....++ ++.+++++|++. .+|.+++| +.++..++.
T Consensus 37 ~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l----~~~la~~~g~~~----~~v~~~~g~t~al~~al~ 106 (416)
T 1qz9_A 37 LGARPVAALARAQAVIAEEW--GNGLIRSWNSAGWRDLSERL----GNRLATLIGARD----GEVVVTDTTSINLFKVLS 106 (416)
T ss_dssp SCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSGGGHHHHH----HHHHHTTTTCCT----TSEEECSCHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHH--hccCccccchhhHHHHHHHH----HHHHHHHcCCCc----ccEEEeCChhHHHHHHHH
Confidence 34568999999987765433 32221 111122 222344 468899999874 25777777 455544555
Q ss_pred hhC------Cc-----------------------c----c---------c--------cccEEEEcCcc--cccccChHH
Q psy10669 115 KAL------PT-----------------------N----N---------A--------RFDFLSSGTTC--YSRCLDYAR 142 (337)
Q Consensus 115 aLl------~~-----------------------~----~---------a--------~pklII~~~S~--~~~~~d~~~ 142 (337)
+++ ++ + - . ++++|++..-. .+...|+++
T Consensus 107 ~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~ 186 (416)
T 1qz9_A 107 AALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQA 186 (416)
T ss_dssp HHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTTEEEEEEESBCTTTCBBCCHHH
T ss_pred hhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCcHHHHHHHhCCCceEEEEeccccCcccccCHHH
Confidence 543 32 0 0 0 15677776433 268889999
Q ss_pred HHHHhhhcCCeEEEeccccccccc---------eeeeec-c------CC-chhhh--hHHHHHhhccCC-----------
Q psy10669 143 FRQICDETDSIMFADMSHISGLIA---------GVKGVT-K------TG-EKILY--DYEEKINNAVFP----------- 192 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~------~G-g~i~~--~l~~~i~~~~~p----------- 192 (337)
|.++|+++|+++++|++|+.|... .++++. | .+ |+++. ++.+.+.+....
T Consensus 187 i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~ 266 (416)
T 1qz9_A 187 LTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAME 266 (416)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCC
T ss_pred HHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCccccccCCC
Confidence 999999999999999999987664 123332 2 23 55544 344444332111
Q ss_pred -----------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCC---CCCeEEE
Q psy10669 193 -----------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGG---TDVHLIL 254 (337)
Q Consensus 193 -----------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~---t~~h~v~ 254 (337)
...++++++.++++..++..+.+...++.++++.++.++|.+.|.+. |+++.... ...++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~ 346 (416)
T 1qz9_A 267 PRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVS 346 (416)
T ss_dssp SSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEE
T ss_pred CccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEE
Confidence 12467899999999888888754456788999999999999999885 89987532 1356777
Q ss_pred EEecCCCcchHHHHHHHhhcCceeccC--cccchhhh
Q psy10669 255 IDLRKNKLTGSKVELVLEEIAIACNKN--TGISLAAE 289 (337)
Q Consensus 255 V~~~~~~~~~~~~~~~L~~~gI~v~~~--~girig~~ 289 (337)
+.+.+ ..++.+.|.+.||.+... ..+||+..
T Consensus 347 ~~~~~----~~~l~~~l~~~gi~~~~~~~~~lRis~~ 379 (416)
T 1qz9_A 347 FEHPE----GYAVIQALIDRGVIGDYREPRIMRFGFT 379 (416)
T ss_dssp EECTT----HHHHHHHHHTTTEECEEETTTEEEEECC
T ss_pred EecCC----HHHHHHHHHhCCcEeccCCCCeEEEeCc
Confidence 76642 567888888889998642 27888754
No 57
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.44 E-value=4.9e-12 Score=119.93 Aligned_cols=230 Identities=13% Similarity=0.074 Sum_probs=154.5
Q ss_pred cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh
Q psy10669 38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA 116 (337)
Q Consensus 38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL 116 (337)
+....+|.|++++...+.+. .+++++.+..+. ...+....+++.+++++|.+. .++.+++| +.|+..++.++
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 8 SAKPVDERILEAMLPYMTES--FGNPSSVHSYGF-KAREAVQEAREKVAKLVNGGG----GTVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTS--CCCTTCSSHHHH-HHHHHHHHHHHHHHHHHTCTT----EEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhc--cCCCCCCcHHHH-HHHHHHHHHHHHHHHHhCCCC----CeEEEcCchHHHHHHHHHHH
Confidence 34467999999998876542 355655443332 223344445678999999875 25666555 88988888888
Q ss_pred C----Cc------------------------------------------cc--c---cccEEEEcCccc--ccccChHHH
Q psy10669 117 L----PT------------------------------------------NN--A---RFDFLSSGTTCY--SRCLDYARF 143 (337)
Q Consensus 117 l----~~------------------------------------------~~--a---~pklII~~~S~~--~~~~d~~~l 143 (337)
. ++ .+ + ++++|++..-.+ +...|+++|
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i 160 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEI 160 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHH
T ss_pred HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHH
Confidence 6 43 00 0 267777763332 688899999
Q ss_pred HHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccC------CCCCCCCcH
Q psy10669 144 RQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVF------PSLQGGPHN 200 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~------p~~~g~~~~ 200 (337)
.++|+++|++ ++|++|..|... .++++. | .| |+++. +. .+.+... ....++++.
T Consensus 161 ~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 237 (382)
T 4eb5_A 161 SEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSENV 237 (382)
T ss_dssp HHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCH
T ss_pred HHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccCceecCCCccccccCCCccH
Confidence 9999999999 999999987653 123333 2 23 44433 22 1222211 122467888
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC--CCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT--DVHLILIDLRKNKLTGSKVELVLEEIAIA 277 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI~ 277 (337)
+.++++..++..+. ..+++.++++.++.++|.+.|.+. |+++..... ..+++.+.+. +.+..++.+.|.+.||.
T Consensus 238 ~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~ 314 (382)
T 4eb5_A 238 PSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--YIEGESIVLSLDMAGIQ 314 (382)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--TSCHHHHHHHHHHHTCB
T ss_pred HHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC--CcCHHHHHHHHHHCCEE
Confidence 88888888887764 356788999999999999999885 888765211 1456667665 45678888888888999
Q ss_pred ecc
Q psy10669 278 CNK 280 (337)
Q Consensus 278 v~~ 280 (337)
+..
T Consensus 315 v~~ 317 (382)
T 4eb5_A 315 AST 317 (382)
T ss_dssp CBC
T ss_pred Eec
Confidence 875
No 58
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.44 E-value=7.6e-12 Score=121.64 Aligned_cols=236 Identities=11% Similarity=0.118 Sum_probs=142.0
Q ss_pred ceeeeccCCC---CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh----cCCCCCCCcceeecCC
Q psy10669 32 GIELIASENF---TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA----FNLDPEQWGCNVQPYS 104 (337)
Q Consensus 32 ~i~l~asen~---~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l----fg~~~~~~~~~v~~~S 104 (337)
.+.-+.++++ .+|.|.+++...+. +++.+....+ |+......+++ +.++++ ++.+. .+|.+++
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~-y~~~~g~~~l~----~~ia~~~~~~~~~~~----~~i~~t~ 126 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAKKAH-ELSTIEGYSG-YGAEQGAKPLR----AAIAKTFYGGLGIGD----DDVFVSD 126 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHHH-HTTSTTTCCC-CCCTTCCHHHH----HHHHHHHHTTTTCCG----GGEEEES
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh-cccccCCccC-CCCCCCCHHHH----HHHHHHHHccCCCCc----ceEEECC
Confidence 3444444454 38999999987644 3332222222 32222334555 344455 46654 3689999
Q ss_pred CchhHHHHHHhhCCc---------------------c-----------------------------cc---cccEEEEc-
Q psy10669 105 GSPANFAVCEKALPT---------------------N-----------------------------NA---RFDFLSSG- 130 (337)
Q Consensus 105 gt~AN~~v~~aLl~~---------------------~-----------------------------~a---~pklII~~- 130 (337)
|+..++.++.+++++ . +. ++++|++.
T Consensus 127 G~~~al~~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~ 206 (432)
T 3ei9_A 127 GAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCS 206 (432)
T ss_dssp CHHHHHHHHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEES
T ss_pred ChHHHHHHHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeC
Confidence 976655556777543 0 00 15777664
Q ss_pred Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--
Q psy10669 131 TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY-- 180 (337)
Q Consensus 131 ~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~-- 180 (337)
+.+ .+...+ +++|.++|+++|++|++|++|.-+..+ .+++|. | .| |+++.
T Consensus 207 p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~ 286 (432)
T 3ei9_A 207 PNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPK 286 (432)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEECh
Confidence 222 234444 455667799999999999999854333 123333 2 24 66654
Q ss_pred hH--------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeE
Q psy10669 181 DY--------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHL 252 (337)
Q Consensus 181 ~l--------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~ 252 (337)
++ .+.+.... ....++++++..++...++........++.++++.++.++|.+.|.+.|+++..+ ..+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~ 364 (432)
T 3ei9_A 287 KLLYSDGFPVAKDFNRII-CTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGG-KNAPY 364 (432)
T ss_dssp TCBCTTSCBHHHHHHHHH-HHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEC-SSSSE
T ss_pred HHhhcchHHHHHHHHHHh-ccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCC-CcceE
Confidence 34 45554331 1224467777777666665422123457888999999999999999999988752 45667
Q ss_pred EEEEecCCCcchHHHHH-HHhhcCceeccC
Q psy10669 253 ILIDLRKNKLTGSKVEL-VLEEIAIACNKN 281 (337)
Q Consensus 253 v~V~~~~~~~~~~~~~~-~L~~~gI~v~~~ 281 (337)
+++++. +.+..++.. .++++||.+.+-
T Consensus 365 ~~~~~~--~~~~~~~~~~ll~~~gv~v~~g 392 (432)
T 3ei9_A 365 VWVHFP--NQSSWDVFAEILEKTHVVTTPG 392 (432)
T ss_dssp EEEECT--TSCHHHHHHHHHHHHCEECEEG
T ss_pred EEEECC--CCCHHHHHHHHHHHCCEEEeCc
Confidence 888887 345555554 455679998863
No 59
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.42 E-value=2.2e-12 Score=122.07 Aligned_cols=225 Identities=12% Similarity=0.053 Sum_probs=146.9
Q ss_pred cCCCCCHHHHHHHhhhhhhccCCCCC--CCcCcCccchHHHHHHHHHHH-HHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669 38 SENFTSLAVLECLGSCLQNKYSEGLP--GKRYYGGNQFIDEIEIVAQQR-SLKAFNLDPEQWGCNVQPYSG-SPANFAVC 113 (337)
Q Consensus 38 sen~~~p~V~~a~~~~l~~~y~~g~~--g~r~~~G~~~~~~lE~~~~~~-~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~ 113 (337)
+.+..+|.|.+++...+...+..+++ ....+.......+++ +. +++++|.+ ++.+++| +.|+..++
T Consensus 17 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~la~~~~~~------~v~~~~g~t~a~~~~~ 86 (371)
T 2e7j_A 17 TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFI----HNQLPKFLGCD------VARVTNGAREAKFAVM 86 (371)
T ss_dssp HTCCCCHHHHHHHHHC--------------------CCHHHHH----HTHHHHHTTSS------EEEEESSHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHH----HHHHHHHcCCC------EEEEeCChHHHHHHHH
Confidence 35667999999998764432110111 111111223334444 57 89999986 4777777 78998888
Q ss_pred HhhCCc----------------------------c--c---------------------ccccEEEEcCcc--cccccCh
Q psy10669 114 EKALPT----------------------------N--N---------------------ARFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 114 ~aLl~~----------------------------~--~---------------------a~pklII~~~S~--~~~~~d~ 140 (337)
.+++++ . . .++++|++..-. .+...|+
T Consensus 87 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~ 166 (371)
T 2e7j_A 87 HSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDV 166 (371)
T ss_dssp HHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCH
T ss_pred HHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCH
Confidence 988654 1 0 125677765322 4688899
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c------CCchhhh--hHHHH-HhhccCCCC------C
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K------TGEKILY--DYEEK-INNAVFPSL------Q 195 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~------~Gg~i~~--~l~~~-i~~~~~p~~------~ 195 (337)
++|.++|+++|+++++|++|+.|... .++++. | .+|+++. ++.+. +.+....+. .
T Consensus 167 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (371)
T 2e7j_A 167 KKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLG 246 (371)
T ss_dssp HHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTT
T ss_pred HHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCccccccccc
Confidence 99999999999999999999998764 123332 2 2366655 45455 554332222 4
Q ss_pred CCCcHHHHHHHHHHHHHHhchhhHHHHHHH--HHHHHHHHHHHHhCCCEEecCC-CCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQV--KANASHLSDEMIKRGYHVVTGG-TDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v--~~na~~l~~~L~~~G~~v~~~~-t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
+++++..++++..++..+.. ++.+++ .++.++|.+.|.+.|+++.... ..++++++.+. +..++.+.|.
T Consensus 247 ~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~ 318 (371)
T 2e7j_A 247 CTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE----VLYEISKKAK 318 (371)
T ss_dssp CCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH----HHHHHHHHSS
T ss_pred CCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC----CHHHHHHHHH
Confidence 67788888888888776532 667788 8999999999999999987521 14678888875 5677778888
Q ss_pred hcCceecc
Q psy10669 273 EIAIACNK 280 (337)
Q Consensus 273 ~~gI~v~~ 280 (337)
+.||.+.+
T Consensus 319 ~~gi~~~~ 326 (371)
T 2e7j_A 319 GGRFFLYR 326 (371)
T ss_dssp SGGGHHHH
T ss_pred HCCEEEEe
Confidence 88998764
No 60
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.42 E-value=3.2e-11 Score=115.19 Aligned_cols=246 Identities=16% Similarity=0.109 Sum_probs=152.7
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcce-eecCC
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCN-VQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~-v~~~S 104 (337)
...|.|...++- .+|.|.+++...+.+. ..+ |.......+++....+.+.+.+|. +.. + +.+++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~~----~~v~~~~ 94 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTH------YGPNIGLLELREAIAEKLKKQNGIEADPK----TEIMVLL 94 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHHHHHHCCCCCTT----TSEEEES
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHhCC-CCC------CCCCCCcHHHHHHHHHHHHHHhCCCCCCC----CeEEEcC
Confidence 456777776664 3899999998765431 112 222222345554333455555584 332 4 55655
Q ss_pred C-chhHHHHHHhhCCc-------------------------------c----------c--c---cccEEEEcCcc--cc
Q psy10669 105 G-SPANFAVCEKALPT-------------------------------N----------N--A---RFDFLSSGTTC--YS 135 (337)
Q Consensus 105 g-t~AN~~v~~aLl~~-------------------------------~----------~--a---~pklII~~~S~--~~ 135 (337)
| +.|+..++.+++++ . + + ++++|++..-. .+
T Consensus 95 g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG 174 (389)
T 1gd9_A 95 GANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTG 174 (389)
T ss_dssp STTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCC
Confidence 5 88998888888654 0 0 0 25766664222 23
Q ss_pred ccc---ChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeeccC-----C---chhhh--hHHHH
Q psy10669 136 RCL---DYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVTKT-----G---EKILY--DYEEK 185 (337)
Q Consensus 136 ~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~~~-----G---g~i~~--~l~~~ 185 (337)
... ++++|.++|+++|+++++|++|..+... .+++|.+| | |+++. ++.+.
T Consensus 175 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 254 (389)
T 1gd9_A 175 AVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIER 254 (389)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHH
Confidence 444 5788889999999999999999876542 01233322 2 55554 56666
Q ss_pred HhhccCCCCCCCCcHHHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcch
Q psy10669 186 INNAVFPSLQGGPHNHAIGAIATAMLQAQS-DEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG 264 (337)
Q Consensus 186 i~~~~~p~~~g~~~~~~iaala~a~~e~~~-~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~ 264 (337)
+.....+ ...+++++..+++..++..... ...++.++++.++.++|.+.|.+.|+++..+ ..+..+++++...+.+.
T Consensus 255 l~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 332 (389)
T 1gd9_A 255 MVKFQMY-NATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKP-KGAFYIFPRIRDTGLTS 332 (389)
T ss_dssp HHHHHTT-TTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-CBTTEECCBCGGGTCCH
T ss_pred HHHHHhh-hccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCC-CeeeEEEEeccCCCCCH
Confidence 6654332 2345666666666666644321 1346778889999999999999989887642 23445666775434567
Q ss_pred HHHHHHHh-hcCceeccCc--------ccchhh
Q psy10669 265 SKVELVLE-EIAIACNKNT--------GISLAA 288 (337)
Q Consensus 265 ~~~~~~L~-~~gI~v~~~~--------girig~ 288 (337)
.++.+.|. +.||.+.+.. .+||+.
T Consensus 333 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~ 365 (389)
T 1gd9_A 333 KKFSELMLKEARVAVVPGSAFGKAGEGYVRISY 365 (389)
T ss_dssp HHHHHHHHHHTCEECEEGGGGCGGGTTBEEEEC
T ss_pred HHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe
Confidence 77888886 7899987532 467764
No 61
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.42 E-value=2e-11 Score=117.06 Aligned_cols=219 Identities=14% Similarity=0.121 Sum_probs=145.8
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA 116 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL 116 (337)
.+...++|.+++++...+... + |.......++| +.+++++|.++ .+.++|||.||..++.++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~--------~-~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~~~ 69 (390)
T 3b8x_A 8 LASSTWDDLEYKAIQSVLDSK--------M-FTMGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIAAL 69 (390)
T ss_dssp SCCCCCCHHHHHHHHHHHHHT--------C-CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHcC--------C-CCCChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHH
Confidence 466788999999998765431 1 22233445555 68899999874 688899999998888888
Q ss_pred -------CCc--------------------------------c--------c----c-cccEEEEcCcccccccChHHHH
Q psy10669 117 -------LPT--------------------------------N--------N----A-RFDFLSSGTTCYSRCLDYARFR 144 (337)
Q Consensus 117 -------l~~--------------------------------~--------~----a-~pklII~~~S~~~~~~d~~~l~ 144 (337)
+++ . + . ++++|++.+ .++.+.|+++|.
T Consensus 70 ~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~-~~g~~~~~~~i~ 148 (390)
T 3b8x_A 70 FFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN-LLGNPNNFDEIN 148 (390)
T ss_dssp TSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC-GGGCCCCHHHHH
T ss_pred HhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC-CccChhhHHHHH
Confidence 543 0 0 0 257777753 567789999999
Q ss_pred HHhhhcCCeEEEeccccccccc-----ee-----eee---cc-----CCchhhh---hHHHHHhhccCCC----------
Q psy10669 145 QICDETDSIMFADMSHISGLIA-----GV-----KGV---TK-----TGEKILY---DYEEKINNAVFPS---------- 193 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~-----g~-----~~T---~~-----~Gg~i~~---~l~~~i~~~~~p~---------- 193 (337)
++|+++|+++++|++|+.|... |. +++ +| .||+++. ++.+.+++....+
T Consensus 149 ~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~ 228 (390)
T 3b8x_A 149 KIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNK 228 (390)
T ss_dssp HHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEET
T ss_pred HHHHHcCCEEEEECcCcccCEECCcccccccceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCcccccccc
Confidence 9999999999999999988654 11 221 12 3677764 3544443321111
Q ss_pred --------------------C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC--CC
Q psy10669 194 --------------------L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGG--TD 249 (337)
Q Consensus 194 --------------------~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~--t~ 249 (337)
. +++++....++++. +. ..++..++..+++++|.+.|.+. |+++.... +.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l~-----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 302 (390)
T 3b8x_A 229 VTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ-LK-----KLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESS 302 (390)
T ss_dssp TTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCC
T ss_pred ccccccccccccccceeccccccCcCHHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcc
Confidence 0 11334444443332 22 34578889999999999999885 88876421 22
Q ss_pred CeEEEEEecCC-CcchHHHHHHHhhcCceecc
Q psy10669 250 VHLILIDLRKN-KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 250 ~h~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~ 280 (337)
.+.++|.+... +.+..++.+.|.+.||.++.
T Consensus 303 ~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~ 334 (390)
T 3b8x_A 303 WFGFSFIIKKDSGVIRKQLVENLNSAGIECRP 334 (390)
T ss_dssp CCEEEEEECTTSCCCHHHHHHHHHHTTBCCBC
T ss_pred cEEEEEEecCcCcccHHHHHHHHHHCCCCeee
Confidence 34566666532 45788899999989999874
No 62
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.41 E-value=3.7e-12 Score=122.10 Aligned_cols=229 Identities=13% Similarity=0.095 Sum_probs=146.2
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF 110 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~ 110 (337)
..+++-..+..+++.+++++...+... ++........+++ +.+++++|.++ .+.+.||+.|+.
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al~ 85 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTT--------WISSVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTALH 85 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHT--------CCSSCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcC--------CccCCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHH
Confidence 445666677778999999998765432 1111223445555 68899999874 577888899998
Q ss_pred HHHHhh-CCc----------------------------------------ccc-----cccEEEEcCcccccccChHHHH
Q psy10669 111 AVCEKA-LPT----------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFR 144 (337)
Q Consensus 111 ~v~~aL-l~~----------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~ 144 (337)
.++.++ +++ .+. ++++|++. ...+...|+++|.
T Consensus 86 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~-n~tG~~~~~~~i~ 164 (391)
T 3dr4_A 86 LALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMPV-HLYGQICDMDPIL 164 (391)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEECCB-CGGGCCCCHHHHH
T ss_pred HHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEEEE-CCCCChhhHHHHH
Confidence 888888 653 011 25777764 3567889999999
Q ss_pred HHhhhcCCeEEEeccccccccc----------eeeee--c-c-----CCchhhh---hHHHHHhhccCCCCC--------
Q psy10669 145 QICDETDSIMFADMSHISGLIA----------GVKGV--T-K-----TGEKILY---DYEEKINNAVFPSLQ-------- 195 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~----------g~~~T--~-~-----~Gg~i~~---~l~~~i~~~~~p~~~-------- 195 (337)
++|+++|+++++|++|+.|... .++++ . | .||+++. ++.+.+......+..
T Consensus 165 ~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 244 (391)
T 3dr4_A 165 EVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFP 244 (391)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCS
T ss_pred HHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCccccc
Confidence 9999999999999999987753 11222 2 2 2566654 355544432111110
Q ss_pred --C-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC------CCCCeEEEEEecC-CCcchH
Q psy10669 196 --G-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG------GTDVHLILIDLRK-NKLTGS 265 (337)
Q Consensus 196 --g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~------~t~~h~v~V~~~~-~~~~~~ 265 (337)
| +.. +.++.+++.......++++.++..++++++.+.|.+.|+++... ....|++++.+.. .+.+..
T Consensus 245 ~~g~~~~---~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 321 (391)
T 3dr4_A 245 IVGFNYR---MTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRD 321 (391)
T ss_dssp SCCCBCB---CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCSSCHH
T ss_pred ccccccC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccchhHH
Confidence 1 011 12222222222223557788999999999999999988887653 1233556776654 256788
Q ss_pred HHHHHHhhcCceecc
Q psy10669 266 KVELVLEEIAIACNK 280 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~ 280 (337)
++.+.|.+.||.+..
T Consensus 322 ~l~~~L~~~GI~v~~ 336 (391)
T 3dr4_A 322 QVIKDLDALGIESRP 336 (391)
T ss_dssp HHHHHHHHTTCCCEE
T ss_pred HHHHHHHHCCCceee
Confidence 899999988998874
No 63
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.40 E-value=5.4e-11 Score=114.46 Aligned_cols=258 Identities=10% Similarity=0.029 Sum_probs=161.1
Q ss_pred HHHHHHHHHh-------h-cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669 18 LYSLIKKEKH-------R-QINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF 89 (337)
Q Consensus 18 ~~~~~~~e~~-------r-q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf 89 (337)
+..+..+|+. + ....+++.++..-+||.|++++... .+ ...+. ...+. ...++...+++.+++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~-~~----~~~~~-~~~~~-~~~~~~~~~~~~la~~~ 91 (398)
T 2fyf_A 19 KAGFMADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTT-AA----ALFGT-SHRQA-PVKNLVGRVRSGLAELF 91 (398)
T ss_dssp -----------CCCCCGGGSCSSCBCCSSSCCCCHHHHHGGGTT-TT----TTTTS-CTTSH-HHHHHHHHHHHHHHHHT
T ss_pred hhcchhhhcCcCcCCccccccCCccccCCCCCCCHHHHHHHhhc-CC----CccCc-CcCCH-HHHHHHHHHHHHHHHHh
Confidence 4455666665 2 4457888888888899999998652 11 11110 01111 22344455678999999
Q ss_pred CCCCCCCcceeec-CCC-chhHHHHHHhhCCc----------------------------------------ccc-cccE
Q psy10669 90 NLDPEQWGCNVQP-YSG-SPANFAVCEKALPT----------------------------------------NNA-RFDF 126 (337)
Q Consensus 90 g~~~~~~~~~v~~-~Sg-t~AN~~v~~aLl~~----------------------------------------~~a-~pkl 126 (337)
|++.+ .+|.+ ++| +.|+..++.+++++ ++. +||+
T Consensus 92 g~~~~---~~i~~~t~g~t~al~~~~~~l~~~gv~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~~i~~~~~~ 168 (398)
T 2fyf_A 92 SLPDG---YEVILGNGGATAFWDAAAFGLIDKRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEPQTDPSVDV 168 (398)
T ss_dssp TCCTT---CEEEEEETCHHHHHHHHHHHTCSSCEEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCCCCCTTCSE
T ss_pred CCCCC---ceEEEeCCchhHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCccccCCCCE
Confidence 99742 25666 555 88988888888654 000 2677
Q ss_pred EEEcCc--ccccccChHHHHHHhhhcCCeEEEeccccccccc-------eeeeeccC-----C--chhhh--hHHHHHhh
Q psy10669 127 LSSGTT--CYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------GVKGVTKT-----G--EKILY--DYEEKINN 188 (337)
Q Consensus 127 II~~~S--~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~~~-----G--g~i~~--~l~~~i~~ 188 (337)
|++... ..+...|+++|.++ +|+++++|++|..|... .++++.+| | |+++. ++.+.++.
T Consensus 169 v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~ 245 (398)
T 2fyf_A 169 IAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEA 245 (398)
T ss_dssp EEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGGGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHH
T ss_pred EEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcccCcEEEEecCcccCCCCceEEEEECHHHHHHhhc
Confidence 776532 24677888777776 89999999999987654 23344322 3 33332 45444421
Q ss_pred c----------c----------CCCCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhC-CCEEec-
Q psy10669 189 A----------V----------FPSLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKR-GYHVVT- 245 (337)
Q Consensus 189 ~----------~----------~p~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~-G~~v~~- 245 (337)
. . .....++++.+.++++..++..+.+.. .++.+++..++.++|.+.|.+. |+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 325 (398)
T 2fyf_A 246 IAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVT 325 (398)
T ss_dssp HHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCC
T ss_pred ccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccC
Confidence 0 0 012356888899999999988775433 6788999999999999999997 898873
Q ss_pred CC-CC-CeEEEEEecCCCcchHHHHHHHhhcCceeccC------cccchhhh
Q psy10669 246 GG-TD-VHLILIDLRKNKLTGSKVELVLEEIAIACNKN------TGISLAAE 289 (337)
Q Consensus 246 ~~-t~-~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~------~girig~~ 289 (337)
+. .. ++++++.+.. +.+..++.+.|.+.||.+.+. ..|||+..
T Consensus 326 ~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~ 376 (398)
T 2fyf_A 326 DPGLRSQVVGTIDFVD-DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMF 376 (398)
T ss_dssp SGGGBCSSEEEEEECT-TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECC
T ss_pred ChhhcCCcEEEEECCC-CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEec
Confidence 11 12 3477887754 567888888888889998642 14777643
No 64
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.40 E-value=3.6e-11 Score=112.24 Aligned_cols=239 Identities=13% Similarity=0.155 Sum_probs=152.4
Q ss_pred HHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCC
Q psy10669 19 YSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQW 96 (337)
Q Consensus 19 ~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~ 96 (337)
.+...++....++.|.|-..||+. +|.|++++...+.. + .++| .....+++ +.+++++|++.
T Consensus 5 ~~~~~~~~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~y~-------~~~~~~lr----~~la~~~~~~~--- 68 (337)
T 3p1t_A 5 GEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-I-NRYP-------FDAEPRVM----RKLAEHFSCPE--- 68 (337)
T ss_dssp ---------CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG-T-TSCC-------TTHHHHHH----HHHHHHHTSCG---
T ss_pred hhhccccccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh-h-ccCC-------CCchHHHH----HHHHHHhCcCH---
Confidence 334445556667788888888986 89999999865432 1 1221 12234444 68889999876
Q ss_pred cceeecCCCc-hhHHHHHHhhCCc----------------------------------------ccc-cccEEEEcCcc-
Q psy10669 97 GCNVQPYSGS-PANFAVCEKALPT----------------------------------------NNA-RFDFLSSGTTC- 133 (337)
Q Consensus 97 ~~~v~~~Sgt-~AN~~v~~aLl~~----------------------------------------~~a-~pklII~~~S~- 133 (337)
.+|.+++|+ +++..++.++ +. +.+ ++++|++....
T Consensus 69 -~~i~~t~G~~~~l~~~~~~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~i~~p~n 146 (337)
T 3p1t_A 69 -DNLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSN 146 (337)
T ss_dssp -GGEEEESHHHHHHHHHHHHS-TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTCCTTEEEEEESSCT
T ss_pred -HHEEEeCCHHHHHHHHHHhc-CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhhcCCCEEEEeCCCC
Confidence 368888885 5666666666 31 111 25777665333
Q ss_pred -cccccChHHHHHHhhhcCCeEEEeccccc--cc--c--c-----eeeeec-c----CC---chhhh--hHHHHHhhccC
Q psy10669 134 -YSRCLDYARFRQICDETDSIMFADMSHIS--GL--I--A-----GVKGVT-K----TG---EKILY--DYEEKINNAVF 191 (337)
Q Consensus 134 -~~~~~d~~~l~eia~~~ga~l~vD~AH~~--Gl--i--~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~ 191 (337)
.+...|.+++.+||++++. +++|++|.. +. . . .+.+|. | .| |+++. ++.+.+.....
T Consensus 147 ptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~ 225 (337)
T 3p1t_A 147 PTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW 225 (337)
T ss_dssp TTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcC
Confidence 4689999999999999986 677999972 11 0 0 123333 2 12 66654 56676765433
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
..+++++..+++..++... ..+.+.++++.++.++|.+.|.+.|+++.. .+...+++... ++..+.+.|
T Consensus 226 ---~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~----~~~~~~~~l 294 (337)
T 3p1t_A 226 ---FCNVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVAS--SEANFVLVENA----AGERTLRFL 294 (337)
T ss_dssp ---TTCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCC--CSSSEEEEECT----TTHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECC--CCCeEEEEEcC----CHHHHHHHH
Confidence 3466777777766665432 245677888899999999999999998865 44455555543 356778889
Q ss_pred hhcCceeccCc------ccchh
Q psy10669 272 EEIAIACNKNT------GISLA 287 (337)
Q Consensus 272 ~~~gI~v~~~~------girig 287 (337)
.+.||.+.+.. .+||+
T Consensus 295 ~~~gi~v~~g~~~~~~~~iRis 316 (337)
T 3p1t_A 295 RERGIQVKDAGQFGLHHHIRIS 316 (337)
T ss_dssp HHTTEECEEGGGGTCCSEEEEE
T ss_pred HHCCeEEEECccCCCCCeEEEe
Confidence 98999998643 46665
No 65
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.39 E-value=1.2e-11 Score=120.87 Aligned_cols=239 Identities=14% Similarity=0.114 Sum_probs=145.0
Q ss_pred cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----CCCCCCCcceeec
Q psy10669 29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----NLDPEQWGCNVQP 102 (337)
Q Consensus 29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g~~~~~~~~~v~~ 102 (337)
.+..|+|...++- .+|.|.+++...+.. +.. ..+...|....-..+++ +.+++++ +.+. .+|.+
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-~~~-~~~~~~y~~~~g~~~lr----~~ia~~~~~g~~~~~----~~i~~ 137 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAG-LAT-REGYSGYGAEQGQGALR----EAVASTFYGHAGRAA----DEIFI 137 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHG-GGG-SCCCCCSTTTTCCHHHH----HHHHHHHHTTTTCCG----GGEEE
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHh-hcc-ccCCCCCCCCCCcHHHH----HHHHHHHHcCCCCCH----HHEEE
Confidence 3346777666553 489999999876543 221 12222333222234554 4556666 4444 36888
Q ss_pred CCCchhHHHHHHhhCCc-----------------------c----------c------------------ccccEEEEcC
Q psy10669 103 YSGSPANFAVCEKALPT-----------------------N----------N------------------ARFDFLSSGT 131 (337)
Q Consensus 103 ~Sgt~AN~~v~~aLl~~-----------------------~----------~------------------a~pklII~~~ 131 (337)
++|+..++..+.+++++ + . .++++|++..
T Consensus 138 t~G~~~al~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 217 (449)
T 3qgu_A 138 SDGSKCDIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCS 217 (449)
T ss_dssp ESCHHHHHHHHHHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEES
T ss_pred ccCHHHHHHHHHHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeC
Confidence 88865444334777543 2 1 0257777742
Q ss_pred ccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccce-----------------eeeec-c----CC---chhhh-
Q psy10669 132 TCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIAG-----------------VKGVT-K----TG---EKILY- 180 (337)
Q Consensus 132 S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g-----------------~~~T~-~----~G---g~i~~- 180 (337)
-.+ +...+ +++|.++|+++|++|++|++|..+...+ +++|. | .| |+++.
T Consensus 218 p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 297 (449)
T 3qgu_A 218 PNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVP 297 (449)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecC
Confidence 222 23443 6677788999999999999998733321 12333 2 23 66654
Q ss_pred -hHHH--------HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669 181 -DYEE--------KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH 251 (337)
Q Consensus 181 -~l~~--------~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h 251 (337)
++.+ .+.... ...+++++++..++...++........++.++++.++.++|.+.|.+.|+++..+ ..+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~ 375 (449)
T 3qgu_A 298 KALKYANGEPVHADWNRVM-TTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGG-DDAP 375 (449)
T ss_dssp TTCBCTTSCBHHHHHHHHH-HHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEES-SSSS
T ss_pred HHHHhhhhhhHHHHHHHHh-hcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCC-CCee
Confidence 2221 232221 1224466777777766666542223457889999999999999999999998752 3467
Q ss_pred EEEEEecCCCcchHHHHHHH-hhcCceeccC
Q psy10669 252 LILIDLRKNKLTGSKVELVL-EEIAIACNKN 281 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~ 281 (337)
.+++++. +.+..++.+.| +++||.+.+.
T Consensus 376 ~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg 404 (449)
T 3qgu_A 376 YIWVGFP--GKPSWDVFAEILERCNIVTTPG 404 (449)
T ss_dssp EEEEECT--TSCHHHHHHHHHHHHCEECEEG
T ss_pred EEEEECC--CCCHHHHHHHHHHHCCEEEecc
Confidence 8888887 55677766555 4579998763
No 66
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.39 E-value=1e-11 Score=117.98 Aligned_cols=244 Identities=14% Similarity=0.114 Sum_probs=159.2
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg 105 (337)
+.-|.|...++.. +|.|.+++...+.+. ..+++.. ..+++...++.+++.+| .+. .+|.+++|
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~----~~v~~~~g 90 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIEHP-IFGYTLP--------PENIGDIICNWTKKQYNWDIQK----EWIVFSAG 90 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSC-CCCCCCC--------CTTHHHHHHHHHHHHHCCCCCG----GGEEEESC
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHhcC-CCCCCCC--------CHHHHHHHHHHHHHHhCCCCCh----hhEEEcCC
Confidence 4567777666655 899999998765432 1122211 23444444567888888 443 25777676
Q ss_pred -chhHHHHHHhhCCc------------------------------c-------c----------ccccEEEEcCccc--c
Q psy10669 106 -SPANFAVCEKALPT------------------------------N-------N----------ARFDFLSSGTTCY--S 135 (337)
Q Consensus 106 -t~AN~~v~~aLl~~------------------------------~-------~----------a~pklII~~~S~~--~ 135 (337)
+.|+..++.+++++ . . .++++|++..-.+ +
T Consensus 91 ~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 170 (383)
T 3kax_A 91 IVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIG 170 (383)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTT
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCC
Confidence 67888888888754 0 0 0267777653333 4
Q ss_pred cccChHH---HHHHhhhcCCeEEEeccccccccce------------------eeeec-c----C---Cchhhh---hHH
Q psy10669 136 RCLDYAR---FRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K----T---GEKILY---DYE 183 (337)
Q Consensus 136 ~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~----~---Gg~i~~---~l~ 183 (337)
...|.++ |.++|+++|+++++|++|..+...| ++++. | . .|+++. ++.
T Consensus 171 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 250 (383)
T 3kax_A 171 RVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLR 250 (383)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred cCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHH
Confidence 5666554 5566999999999999997633321 12232 2 1 255543 466
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCC
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
+.+.....+...++++++..+++..++.+. ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++++...+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~ 328 (383)
T 3kax_A 251 QAFTSIQYRQGFHGLNIFAYTAMQSAYTEC-NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKP-EGSFLLWIDCSALN 328 (383)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC-SBSSEEEEECGGGC
T ss_pred HHHHHHHhhcccCCCCHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC-CceEEEEEEccccC
Confidence 666654444445678888888887777653 2335678889999999999999884 9988752 33455568887766
Q ss_pred cchHHHHHHHh-hcCceeccCc--------ccchhh
Q psy10669 262 LTGSKVELVLE-EIAIACNKNT--------GISLAA 288 (337)
Q Consensus 262 ~~~~~~~~~L~-~~gI~v~~~~--------girig~ 288 (337)
.+..++.+.|. +.||.+.+.. .+||+.
T Consensus 329 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~ 364 (383)
T 3kax_A 329 LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINI 364 (383)
T ss_dssp CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEEC
T ss_pred CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEE
Confidence 67888888886 6899998632 477753
No 67
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.38 E-value=6e-11 Score=112.28 Aligned_cols=233 Identities=13% Similarity=0.107 Sum_probs=160.9
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
+..|.|...+|.. +|.|++++...+.. ..+++... . .++ ++.+++++|.+. .+|.+++| +
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~------~-~~l----r~~la~~~~~~~----~~v~~~~g~~ 92 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANK--AHLYPDDS------M-IEL----KSTLAQKYKVQN----ENIIIGAGSD 92 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGG--TTSCCCTT------C-HHH----HHHHHHHHTCCG----GGEEEESSHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh--hccCCCCC------h-HHH----HHHHHHHhCCCc----ceEEECCCHH
Confidence 4678888888875 89999999876542 12333221 1 244 467889999865 25777666 6
Q ss_pred hhHHHHHHhhCCc----------------------------cc----------------ccccEEEEc-Ccc-cccccCh
Q psy10669 107 PANFAVCEKALPT----------------------------NN----------------ARFDFLSSG-TTC-YSRCLDY 140 (337)
Q Consensus 107 ~AN~~v~~aLl~~----------------------------~~----------------a~pklII~~-~S~-~~~~~d~ 140 (337)
+|+..++.+++++ .. .++++|++. +++ .+...|.
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~ 172 (365)
T 3get_A 93 QVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDA 172 (365)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCH
Confidence 7888888888754 11 026777775 333 4688898
Q ss_pred HHHHHHhh--hcCCeEEEecccccccc---c----------------eeeeec-c----CC---chhhh--hHHHHHhhc
Q psy10669 141 ARFRQICD--ETDSIMFADMSHISGLI---A----------------GVKGVT-K----TG---EKILY--DYEEKINNA 189 (337)
Q Consensus 141 ~~l~eia~--~~ga~l~vD~AH~~Gli---~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~~ 189 (337)
+++.+|++ ++|+++++|++|..+.. + .+++|. | .| |+++. ++.+.+...
T Consensus 173 ~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 252 (365)
T 3get_A 173 SEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKL 252 (365)
T ss_dssp HHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHh
Confidence 98888887 66999999999984441 1 122333 2 12 56554 577777665
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
..+ .+++++..+++..++... ...++.++++.++.++|.+.|.+.|+++.. .+...+++++... +..++.+
T Consensus 253 ~~~---~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~--~~~~~~~~~~~~~--~~~~~~~ 323 (365)
T 3get_A 253 RAP---FNVSNLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKHNIKIID--SYTNFITYFFDEK--NSTDLSE 323 (365)
T ss_dssp SCT---TCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCEECC--CSSSEEEEECSSS--CHHHHHH
T ss_pred cCC---CCcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECC--CCCeEEEEECCCC--CHHHHHH
Confidence 443 247777877777776542 345788999999999999999999998865 4455577887653 6788888
Q ss_pred HHhhcCceeccCc-----ccchhh
Q psy10669 270 VLEEIAIACNKNT-----GISLAA 288 (337)
Q Consensus 270 ~L~~~gI~v~~~~-----girig~ 288 (337)
.|.+.||.+.+.. .+||+.
T Consensus 324 ~l~~~gi~v~~g~~~~~~~iRis~ 347 (365)
T 3get_A 324 KLLKKGIIIRNLKSYGLNAIRITI 347 (365)
T ss_dssp HHHTTTEECEECGGGTCSEEEEEC
T ss_pred HHHHCCEEEEECccCCCCEEEEEc
Confidence 8988899987642 467763
No 68
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.38 E-value=1.6e-12 Score=122.85 Aligned_cols=227 Identities=13% Similarity=0.066 Sum_probs=136.7
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCE 114 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~ 114 (337)
|..+.+-..+.+++++. .+++ +..++..|+......++| +++++++|.+. .+.++||+.||..++.
T Consensus 15 l~~~~~p~~~~~~~~~~----~~~~-~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~al~ 80 (357)
T 3lws_A 15 QISGHGKRNVGVLKTAF----AAVA-DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVALR 80 (357)
T ss_dssp ESSBSSCCBHHHHHHHH----TTSC-TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHH----HHhh-cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHH
Confidence 44455544555555443 2332 233445565556667777 57789999864 5777899999888777
Q ss_pred hhCCc-------------------------------------------cc---ccccEEEEcCccc---cccc---ChHH
Q psy10669 115 KALPT-------------------------------------------NN---ARFDFLSSGTTCY---SRCL---DYAR 142 (337)
Q Consensus 115 aLl~~-------------------------------------------~~---a~pklII~~~S~~---~~~~---d~~~ 142 (337)
+++.+ .+ .++++|++..... +... ++++
T Consensus 81 ~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~~~~~v~~~~p~np~~G~~~~~~~l~~ 160 (357)
T 3lws_A 81 IWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAADRLMTLDEIKALPDIACLLLELPQREIGGVAPAFSELET 160 (357)
T ss_dssp HHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCTTSCCCHHHHHTCCSCSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred HHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecCCCCCcCHHHHhcCcCcceEEEEcccccCCceeCCHHHHHH
Confidence 76421 00 0157777653332 4444 4777
Q ss_pred HHHHhhhcCCeEEEecccccccc---c-----------eeeeec------cCCchhhh--hHHHHHhhcc--CCCCCCCC
Q psy10669 143 FRQICDETDSIMFADMSHISGLI---A-----------GVKGVT------KTGEKILY--DYEEKINNAV--FPSLQGGP 198 (337)
Q Consensus 143 l~eia~~~ga~l~vD~AH~~Gli---~-----------g~~~T~------~~Gg~i~~--~l~~~i~~~~--~p~~~g~~ 198 (337)
|.++|+++|++|++|+||..+.. + .++.|. +.||+++. ++.+.+.... +.+...+.
T Consensus 161 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T 3lws_A 161 ISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAAFCQTARIWKRRYGGDLISL 240 (357)
T ss_dssp HHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCHHHHHHHHHHHHHhcCCcccc
Confidence 88999999999999999972211 1 133333 24677665 4555544221 21111112
Q ss_pred cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC-cchHHHHHHHhhcCc
Q psy10669 199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK-LTGSKVELVLEEIAI 276 (337)
Q Consensus 199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~-~~~~~~~~~L~~~gI 276 (337)
+....++ ..++.+. .+..++..++.+++.+.|.+. |+++......+..+++++...+ .+..++.+.|.+.||
T Consensus 241 ~~~~~~~-~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 314 (357)
T 3lws_A 241 YPYIVSA-DYYYELR-----KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGL 314 (357)
T ss_dssp HHHHHHH-HHHHHHH-----TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCE
T ss_pred hHHHHHH-HHHHHHH-----HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCe
Confidence 2222222 2333332 233455678899999999985 9988533467788899987642 135677888888999
Q ss_pred eeccC
Q psy10669 277 ACNKN 281 (337)
Q Consensus 277 ~v~~~ 281 (337)
.+.+-
T Consensus 315 ~v~~g 319 (357)
T 3lws_A 315 GFVGY 319 (357)
T ss_dssp ESCSC
T ss_pred EEecc
Confidence 99864
No 69
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.38 E-value=6.4e-12 Score=118.60 Aligned_cols=234 Identities=11% Similarity=0.042 Sum_probs=149.6
Q ss_pred HHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669 25 EKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP 102 (337)
Q Consensus 25 e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~ 102 (337)
+..++...+.+.+++|.. +|.|.+++...+. ...|.......+++ +++++++|.+. .+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~---------~~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~ 69 (359)
T 3pj0_A 8 TSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLE---------SDIYGNGAVIEDFE----TKIAKILGKQS-----AVFF 69 (359)
T ss_dssp HHHHTCSEESSSSSCCBHHHHHHHTTTSCTTCB---------CCBTTBSHHHHHHH----HHHHHHHTCSE-----EEEE
T ss_pred HHHHhcchhhcCCCccccCCCHHHHHHHHhhcc---------cCcccCCHHHHHHH----HHHHHHhCCCc-----EEEe
Confidence 445778889999999999 9999998875321 11232233445565 57889999875 5777
Q ss_pred CCCchhHHHHHHhhCCc---------------------------------------------ccc--cccEEEEcCcc-c
Q psy10669 103 YSGSPANFAVCEKALPT---------------------------------------------NNA--RFDFLSSGTTC-Y 134 (337)
Q Consensus 103 ~Sgt~AN~~v~~aLl~~---------------------------------------------~~a--~pklII~~~S~-~ 134 (337)
+||+.||..++.+++.+ +.+ ++++|++.... .
T Consensus 70 ~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v~~~~p~n~ 149 (359)
T 3pj0_A 70 PSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQLLTIDDIKSLREPVSSVLIELPQRE 149 (359)
T ss_dssp SCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCTTSCCCHHHHHTCSSCCSEEEEESSBGG
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCcCCCcCHHHHHhccCCceEEEEEecccC
Confidence 88899988887776321 111 26888875332 2
Q ss_pred --ccccChHHH---HHHhhhcCCeEEEeccccccccc--------------eeeeec-c-----CCchhhh--hHHHHHh
Q psy10669 135 --SRCLDYARF---RQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-----TGEKILY--DYEEKIN 187 (337)
Q Consensus 135 --~~~~d~~~l---~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-----~Gg~i~~--~l~~~i~ 187 (337)
+...|.+++ .++|+++|++|++|++|..+... .++.+. | .||+++. ++.+.+.
T Consensus 150 ~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~ 229 (359)
T 3pj0_A 150 IGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAK 229 (359)
T ss_dssp GTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCHHHHHHHH
Confidence 456666665 78999999999999998765421 122233 2 2455554 4666554
Q ss_pred hc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC-cc
Q psy10669 188 NA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK-LT 263 (337)
Q Consensus 188 ~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~-~~ 263 (337)
.. .+.+...+.+....+++ .++.+. .+..++..++.+++++.|.+. |+++....+.++.+++++...+ .+
T Consensus 230 ~~~~~~~~~~~~~~~~~~a~~-~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
T 3pj0_A 230 IWKRRYGGDLISLYPYILSAD-YYFEKR-----IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEI 303 (359)
T ss_dssp HHHHHTTCCCSCCHHHHHHHH-HHHHHH-----GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHH
T ss_pred HHHHHhCCCcchhHHHHHHHH-HHHHHH-----HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchh
Confidence 31 12221212222222222 333332 244556788999999999995 9988533467788888886532 24
Q ss_pred hHHHHHHHhhcCceeccCc
Q psy10669 264 GSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 264 ~~~~~~~L~~~gI~v~~~~ 282 (337)
..++.+.|.+.||.+.+..
T Consensus 304 ~~~l~~~l~~~GV~v~~g~ 322 (359)
T 3pj0_A 304 GAILTKIQDETGVGISGYL 322 (359)
T ss_dssp HHHHHHHHHHHCEECCSCC
T ss_pred HHHHHHHHHhcCcEecCCc
Confidence 5678888888999998743
No 70
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.37 E-value=5.9e-11 Score=112.43 Aligned_cols=232 Identities=12% Similarity=0.063 Sum_probs=154.1
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC-CCCCCcceeecCCC-
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL-DPEQWGCNVQPYSG- 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~-~~~~~~~~v~~~Sg- 105 (337)
++.|.|...+|.. +|.|++++...+.+....+++. ....+++ +.+++++|. +. .++.+++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~l~----~~la~~~g~~~~----~~i~~~~g~ 94 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEALR----AKLKEVMQVPAG----MEVLLGNGS 94 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHHHH----HHHHHHHTCCTT----CEEEEEEHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHHHH----HHHHHHhCCCCc----ceEEEcCCH
Confidence 4568888888875 8999999987655321122222 1234444 678899998 43 25777776
Q ss_pred chhHHHHHHhhCCc-----------------------------------------cc---c-cccEEEEcCcc--ccccc
Q psy10669 106 SPANFAVCEKALPT-----------------------------------------NN---A-RFDFLSSGTTC--YSRCL 138 (337)
Q Consensus 106 t~AN~~v~~aLl~~-----------------------------------------~~---a-~pklII~~~S~--~~~~~ 138 (337)
+.|+..++.+++++ +. . ++++|++..-. .+...
T Consensus 95 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 174 (367)
T 3euc_A 95 DEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF 174 (367)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence 67888888888654 00 1 36888775323 24554
Q ss_pred ---ChHHHHHHhhhc--CCeEEEecccccc----ccc--------eeeeeccC----C---chhhh--hHHHHHhhccCC
Q psy10669 139 ---DYARFRQICDET--DSIMFADMSHISG----LIA--------GVKGVTKT----G---EKILY--DYEEKINNAVFP 192 (337)
Q Consensus 139 ---d~~~l~eia~~~--ga~l~vD~AH~~G----li~--------g~~~T~~~----G---g~i~~--~l~~~i~~~~~p 192 (337)
++++|.++|+++ |+++++|++|... ... .++++..| | |+++. ++.+.+.....+
T Consensus 175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~ 254 (367)
T 3euc_A 175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKVRPP 254 (367)
T ss_dssp CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccccCceeeeeCHHHHHHHHHhCCC
Confidence 455666779999 9999999999742 111 12233322 2 55554 577777665443
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
.++++...+++..++.. ....++.++++.++.++|.+.|.+. |+++.. .....+++.+. +..++.+.|
T Consensus 255 ---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~~~~~~~~~~~----~~~~l~~~l 323 (367)
T 3euc_A 255 ---YNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP--SAANFLLARVP----DAAQTFDRL 323 (367)
T ss_dssp ---SCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC--CSSSEEEEECS----CHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeEEEEECC----CHHHHHHHH
Confidence 25677777777777655 2345788899999999999999986 998754 44556677775 577888889
Q ss_pred hhcCceeccCc--------ccchh
Q psy10669 272 EEIAIACNKNT--------GISLA 287 (337)
Q Consensus 272 ~~~gI~v~~~~--------girig 287 (337)
.+.||.+.... .|||+
T Consensus 324 ~~~gi~v~~~~~~~~~~~~~iRis 347 (367)
T 3euc_A 324 LARKVLIKNVSKMHPLLANCLRVT 347 (367)
T ss_dssp HTTTEECEECGGGCGGGTTEEEEE
T ss_pred HHCCeEEEECCccCCCCCCEEEEe
Confidence 88999987533 46776
No 71
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.36 E-value=2.1e-11 Score=115.48 Aligned_cols=220 Identities=13% Similarity=0.058 Sum_probs=141.2
Q ss_pred cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-
Q psy10669 38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA- 116 (337)
Q Consensus 38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL- 116 (337)
+...++|.|++++...+.+.+ .++ .....+++ +.+++++|.+. .+..+||+.|+..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~~~ 68 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GKRSLLFE----EALCEFLGVKH-----ALVFNSATSALLTLYRNFS 68 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS-------SHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC-------ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhc
Confidence 456789999999987654321 112 12234444 68899999873 355566689998888998
Q ss_pred --CCc---------------------------------------cc--c---cccEEEEcCcccccccChHHHHHHhhhc
Q psy10669 117 --LPT---------------------------------------NN--A---RFDFLSSGTTCYSRCLDYARFRQICDET 150 (337)
Q Consensus 117 --l~~---------------------------------------~~--a---~pklII~~~S~~~~~~d~~~l~eia~~~ 150 (337)
+++ .+ + ++++|++... .+...|+++|.++|+++
T Consensus 69 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~-tG~~~~l~~i~~l~~~~ 147 (375)
T 2fnu_A 69 EFSADRNEIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY-AGKSVEVESVQKLCKKH 147 (375)
T ss_dssp CCCTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG-GGCCCCHHHHHHHHHHH
T ss_pred ccCCCCCEEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC-cCCccCHHHHHHHHHHc
Confidence 654 11 1 1576666544 78889999999999999
Q ss_pred CCeEEEeccccccccc--------e--eeeec---c-----CCchhhh---hHHHHHhhccCCCC------------CCC
Q psy10669 151 DSIMFADMSHISGLIA--------G--VKGVT---K-----TGEKILY---DYEEKINNAVFPSL------------QGG 197 (337)
Q Consensus 151 ga~l~vD~AH~~Gli~--------g--~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~~------------~g~ 197 (337)
|+++++|++|..|... + ...+. | .|++++. ++.+.+.+....+. .+.
T Consensus 148 ~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (375)
T 2fnu_A 148 SLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGH 227 (375)
T ss_dssp TCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCC
T ss_pred CCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccccCceEEEeCCHHHHHHHHHHHhcCCccccccccccccccc
Confidence 9999999999987643 1 11221 2 2445552 36555554321111 111
Q ss_pred C-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC--C--CCCeEEEEEecCCCc-chHHHHHH
Q psy10669 198 P-HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG--G--TDVHLILIDLRKNKL-TGSKVELV 270 (337)
Q Consensus 198 ~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~--~--t~~h~v~V~~~~~~~-~~~~~~~~ 270 (337)
. .++.+++ ++++... ..+++..++..+++++|.+.|.+. |+++... + ...+++++.+...+. +..++.+.
T Consensus 228 ~~~~~~~~~-a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (375)
T 2fnu_A 228 NFRLNEIQS-ALGLSQL--KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILES 304 (375)
T ss_dssp BCCCCHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHH
T ss_pred cCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHH
Confidence 1 1222221 1222222 345788899999999999999985 8888652 1 234667788765444 67788888
Q ss_pred HhhcCceec
Q psy10669 271 LEEIAIACN 279 (337)
Q Consensus 271 L~~~gI~v~ 279 (337)
|.+.||.+.
T Consensus 305 L~~~gi~v~ 313 (375)
T 2fnu_A 305 LHKRGILAQ 313 (375)
T ss_dssp HHHTTEECB
T ss_pred HHHCCCCcc
Confidence 988899987
No 72
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.36 E-value=4.2e-11 Score=113.94 Aligned_cols=259 Identities=11% Similarity=0.087 Sum_probs=166.7
Q ss_pred cHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--
Q psy10669 15 DPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN-- 90 (337)
Q Consensus 15 d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg-- 90 (337)
+..+++...++.. ....|.|...++-. +|.|.+++...+.+. ..++ -.+. .++....++.+++++|
T Consensus 18 g~~~~d~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y-----~~~~---~~~~~~l~~~l~~~~g~~ 87 (391)
T 4dq6_A 18 FSSKWSEMEKKYG-TNDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGY-----TTRP---DSYNESIVNWLYRRHNWK 87 (391)
T ss_dssp TBHHHHCHHHHHS-CSCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCC-----BCCC---HHHHHHHHHHHHHHHCCC
T ss_pred CceeeeecccccC-CCCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCC-----CCCC---HHHHHHHHHHHHHHhCCC
Confidence 3445555443222 24567887777654 799999998765431 1111 1122 4555555678889998
Q ss_pred CCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------c--------cc--------c
Q psy10669 91 LDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------N--------NA--------R 123 (337)
Q Consensus 91 ~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------~--------~a--------~ 123 (337)
.+. .++.+++| +.|+..++.+++++ . .- +
T Consensus 88 ~~~----~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 163 (391)
T 4dq6_A 88 IKS----EWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIK 163 (391)
T ss_dssp CCG----GGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT
T ss_pred CcH----HHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh
Confidence 444 25677666 78888888888754 1 00 0
Q ss_pred -ccEEEEcCccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c-----
Q psy10669 124 -FDFLSSGTTCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K----- 173 (337)
Q Consensus 124 -pklII~~~S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~----- 173 (337)
+++|++..-.+ +.. .++++|.++|+++|++|++|++|..+...| +++|. |
T Consensus 164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 243 (391)
T 4dq6_A 164 DVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIA 243 (391)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCG
T ss_pred cCCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCc
Confidence 46666543232 344 456677788999999999999997643321 12232 2
Q ss_pred --CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC
Q psy10669 174 --TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG 246 (337)
Q Consensus 174 --~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~ 246 (337)
..|+++. ++.+.+.....+...++++++..+++..++.+. ....++.++++.++.++|.+.|.+ .|+++..+
T Consensus 244 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 322 (391)
T 4dq6_A 244 GLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG-ESWLESFLEYLESNIDFAIKYINENMPKLKVRKP 322 (391)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC
T ss_pred ccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCC
Confidence 1256543 466666654334445678888888888888763 234577888999999999999987 38988752
Q ss_pred CCCCeEEEEEecCCCcchHHHHHHHhhc-CceeccCc--------ccchhhh
Q psy10669 247 GTDVHLILIDLRKNKLTGSKVELVLEEI-AIACNKNT--------GISLAAE 289 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~~~~~~~~~L~~~-gI~v~~~~--------girig~~ 289 (337)
..+..+++++...+.+..++.+.|.+. ||.+.+.. .+||+..
T Consensus 323 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~ 373 (391)
T 4dq6_A 323 -EGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA 373 (391)
T ss_dssp -SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC
T ss_pred -CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc
Confidence 334555688876556788888888876 99997532 4777643
No 73
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.36 E-value=3.6e-12 Score=125.49 Aligned_cols=200 Identities=11% Similarity=0.075 Sum_probs=137.3
Q ss_pred HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------------------- 119 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------------------- 119 (337)
++++++++|++. ..|.+++| +.++..++.+++++
T Consensus 117 ~~~la~~~g~~~----~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~ 192 (465)
T 3e9k_A 117 VGLMKDIVGANE----KEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP 192 (465)
T ss_dssp HGGGHHHHTCCG----GGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred HHHHHHHcCCCc----CCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence 578899999985 35888888 56666667777542
Q ss_pred --------------cc----ccccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc---------eeee
Q psy10669 120 --------------NN----ARFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKG 170 (337)
Q Consensus 120 --------------~~----a~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~ 170 (337)
.+ .++++|++..-. .+...|+++|.++|+++|+++++|++|+.|.+. .+++
T Consensus 193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~ 272 (465)
T 3e9k_A 193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACW 272 (465)
T ss_dssp CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEE
T ss_pred CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEE
Confidence 00 124677776433 368899999999999999999999999999876 1222
Q ss_pred e-cc------CC-chhhh--hHHHHHhhccC--------------------C----CCCCCCcHHHHHHHHHHHHHHhch
Q psy10669 171 V-TK------TG-EKILY--DYEEKINNAVF--------------------P----SLQGGPHNHAIGAIATAMLQAQSD 216 (337)
Q Consensus 171 T-~~------~G-g~i~~--~l~~~i~~~~~--------------------p----~~~g~~~~~~iaala~a~~e~~~~ 216 (337)
+ +| .| |+++. ++.+.+.+... + ...|+++...++++.+++..+.+.
T Consensus 273 s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~ 352 (465)
T 3e9k_A 273 CSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQA 352 (465)
T ss_dssp CSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHc
Confidence 2 22 22 33322 33322221100 0 113589999999999999887654
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh-----------CCCEEecCCC---CCeEEEEEecCCCcchHHHHHHHhhcCceeccC-
Q psy10669 217 EFKSYQAQVKANASHLSDEMIK-----------RGYHVVTGGT---DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN- 281 (337)
Q Consensus 217 ~~~~y~~~v~~na~~l~~~L~~-----------~G~~v~~~~t---~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~- 281 (337)
..++.+++..+++++|.+.|.+ .|+++++... ...++++.+. .++.++.+.|.+.||.+...
T Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~---~~~~~l~~~L~~~Gi~v~~~~ 429 (465)
T 3e9k_A 353 TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS---VPNKDVFQELEKRGVVCDKRN 429 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC---CTTCCHHHHHHTTTEECEEET
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec---CCHHHHHHHHHHCCEEEecCC
Confidence 4688999999999999999998 7999886311 1456667665 24566788888889998643
Q ss_pred -cccchhh
Q psy10669 282 -TGISLAA 288 (337)
Q Consensus 282 -~girig~ 288 (337)
..|||+.
T Consensus 430 ~~~iRis~ 437 (465)
T 3e9k_A 430 PNGIRVAP 437 (465)
T ss_dssp TTEEEEBC
T ss_pred CCEEEEeC
Confidence 2788874
No 74
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.36 E-value=7.1e-11 Score=111.28 Aligned_cols=247 Identities=13% Similarity=0.067 Sum_probs=156.7
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCc---cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC--
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG---NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-- 105 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G---~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-- 105 (337)
+.+++.+....+||.|++++...+. ++ .++|+..|+. .....++...+++.+++++|.+.+ .+|.+++|
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---~~v~~~~g~g 76 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKELL-NF--NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND---YQILFLQGGA 76 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSS-SS--TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCcCCCHHHHHHHHHHhh-hh--ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC---ceEEEECCcc
Confidence 4577888888889999999987653 33 3344433322 122233444456789999998743 25777665
Q ss_pred chhHHHHHHhhCCc-------------------------------------------cc-c---cccEEEEcC-cc-ccc
Q psy10669 106 SPANFAVCEKALPT-------------------------------------------NN-A---RFDFLSSGT-TC-YSR 136 (337)
Q Consensus 106 t~AN~~v~~aLl~~-------------------------------------------~~-a---~pklII~~~-S~-~~~ 136 (337)
+.|+..++.+++.+ +. + ++|+|++.. ++ .+.
T Consensus 77 t~al~~~~~~l~~~~~~g~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~ 156 (360)
T 1w23_A 77 SLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGT 156 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTE
T ss_pred hHHHHHHHHHhcCCCCcccEEEecchhHHHHHHHHHhCCeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcce
Confidence 57787777777531 11 1 157777653 22 345
Q ss_pred ccChHHHHHHhhhcCCeEEEeccccccccc-------eeeeecc-----CC-chhhh--hHHHHHhhcc-----------
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLIA-------GVKGVTK-----TG-EKILY--DYEEKINNAV----------- 190 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~~-----~G-g~i~~--~l~~~i~~~~----------- 190 (337)
..| +|++++|+++++|++|..|... .++++.+ .| |+++. ++.+++.+..
T Consensus 157 ~~~-----~i~~~~~~~li~D~a~~~~~~~~~~~~~di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (360)
T 1w23_A 157 QYQ-----NFPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIK 231 (360)
T ss_dssp ECS-----SCCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHH
T ss_pred ecc-----cccccCCceEEEechhhcCCCCcCcccCCEEEEEcccccCCCCcEEEEEcHHHHhhcccCCcchhhhhhhhh
Confidence 445 5566899999999999988654 2334432 24 55554 3444333321
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-C-EEe--cCCCCCeEEEEEecCCCcchH
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-Y-HVV--TGGTDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~-~v~--~~~t~~h~v~V~~~~~~~~~~ 265 (337)
.....++++...++++..++..+.+. ..++.+++..++++++.+.|.+.+ + .+. ....-++++++.+.. +.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 310 (360)
T 1w23_A 232 SDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRN-EELNQ 310 (360)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSS-HHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCC-CccHH
Confidence 01224788889999998888876533 457889999999999999999875 4 543 111124477787753 22455
Q ss_pred HHHHHHhhcCceeccCc----ccchhhh
Q psy10669 266 KVELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~~~----girig~~ 289 (337)
++.+.|.+.||.+.+.. .|||+..
T Consensus 311 ~~~~~l~~~gi~~~~~~~~~~~iRis~~ 338 (360)
T 1w23_A 311 QFLAKAKEQGFVGLNGHRSVGGCRASIY 338 (360)
T ss_dssp HHHHHHHHTTEESCBCCTTTCSEEEECC
T ss_pred HHHHHHHHCCeeeecCCCCCCeEEEEec
Confidence 66677878899986542 5777654
No 75
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.35 E-value=8.1e-12 Score=119.49 Aligned_cols=234 Identities=14% Similarity=0.078 Sum_probs=156.5
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE 114 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~ 114 (337)
.++...++|.|++++...+.+.| +++++.+..+ ....++...+++.+++++|++. .++.+++| +.|+..++.
T Consensus 26 ~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~----~~v~~~~g~t~al~~~~~ 98 (400)
T 3vax_A 26 AAATTRVDQRVADIVLHWMTAEF--GNAGSRHEYG-IRAKRGVERAREYLASTVSAEP----DELIFTSGATESNNIALL 98 (400)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHH-HHHHHHHHHHHHHHHHHTTCCG----GGEEEESCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhcc--CCCcccchhH-HHHHHHHHHHHHHHHHHcCCCC----CcEEEeCCHHHHHHHHHH
Confidence 34555679999999988766544 4555533322 2233444455678999999975 25666666 788877777
Q ss_pred hhC----C----c-----------------------------------------ccc---cccEEEEcCcc--cccccCh
Q psy10669 115 KAL----P----T-----------------------------------------NNA---RFDFLSSGTTC--YSRCLDY 140 (337)
Q Consensus 115 aLl----~----~-----------------------------------------~~a---~pklII~~~S~--~~~~~d~ 140 (337)
+++ + . +.+ ++++|++.... .+...|+
T Consensus 99 ~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l 178 (400)
T 3vax_A 99 GLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPV 178 (400)
T ss_dssp TTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCH
T ss_pred HHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcH
Confidence 775 1 2 111 26777776433 3578899
Q ss_pred HHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c----CC-chhh-h-h--HH---HHHhhccC------CC
Q psy10669 141 ARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K----TG-EKIL-Y-D--YE---EKINNAVF------PS 193 (337)
Q Consensus 141 ~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~----~G-g~i~-~-~--l~---~~i~~~~~------p~ 193 (337)
++|.++|+++|+++++|++|+.|... .++++. | .| |+++ . + +. +.+.+..+ ..
T Consensus 179 ~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (400)
T 3vax_A 179 AELAQQLRATPTYLHVDAAQGYGKVPGDLTTPIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKL 258 (400)
T ss_dssp HHHHHHHTTSSCEEEEECTTTTTTSGGGGGSCCSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGT
T ss_pred HHHHHHHHhcCCEEEEEhhhhcCCCCcChhhcCcEEEEeHHHhCCCCceEEEEEecchhccccccccCceecCCCceeee
Confidence 99999999999999999999987654 223333 2 22 3333 2 2 11 22222221 12
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC--CCeEEEEEecCCCcchHHHHHHH
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT--DVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
..++++...++++..++..+. ...++.+++..++.++|.+.|...|+++..... ..+++.+.+. +.+..++.+.|
T Consensus 259 ~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L 335 (400)
T 3vax_A 259 RPGTLPVPLIMGLAEAAKIFE-AEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFE--DVDAEAFLVTL 335 (400)
T ss_dssp SCSCCCHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECT--TCCHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeC--CCCHHHHHHHH
Confidence 256788899999988887764 356889999999999999999977898875321 1356666554 45788888999
Q ss_pred hhcCceecc
Q psy10669 272 EEIAIACNK 280 (337)
Q Consensus 272 ~~~gI~v~~ 280 (337)
. .||.+..
T Consensus 336 ~-~gi~v~~ 343 (400)
T 3vax_A 336 K-DLVAVAT 343 (400)
T ss_dssp H-HHHHHTT
T ss_pred h-cCcEEEe
Confidence 8 8998765
No 76
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.34 E-value=1.1e-11 Score=130.18 Aligned_cols=205 Identities=13% Similarity=0.074 Sum_probs=144.5
Q ss_pred HHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------c------
Q psy10669 79 IVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------N------ 120 (337)
Q Consensus 79 ~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------~------ 120 (337)
..+++.++++||.+. .+.+++| +.||.+++.+++++ .
T Consensus 208 ~~~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~ 282 (755)
T 2vyc_A 208 GESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGII 282 (755)
T ss_dssp HHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCB
T ss_pred HHHHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccc
Confidence 345678999999985 5777888 47899999999765 1
Q ss_pred --c-----c--------c--c----------cEEEEcCcc-cccccChHHHHHHhhhcCCeEEEecccccccc-------
Q psy10669 121 --N-----A--------R--F----------DFLSSGTTC-YSRCLDYARFRQICDETDSIMFADMSHISGLI------- 165 (337)
Q Consensus 121 --~-----a--------~--p----------klII~~~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli------- 165 (337)
. - + | ++++++.++ ++...|+++|.++|+++|+++++|+||+.++.
T Consensus 283 g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~ 362 (755)
T 2vyc_A 283 GPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD 362 (755)
T ss_dssp CCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT
T ss_pred cccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCC
Confidence 0 0 0 1 266655444 47889999999999999999999999975321
Q ss_pred ----ce-----------eeeeccC-------Cchhhh--h---H-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchh
Q psy10669 166 ----AG-----------VKGVTKT-------GEKILY--D---Y-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217 (337)
Q Consensus 166 ----~g-----------~~~T~~~-------Gg~i~~--~---l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~ 217 (337)
.+ ++++.|| ||++.. + + ...++........++|+.+.++|+.+|+..+....
T Consensus 363 ~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~g 442 (755)
T 2vyc_A 363 HYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNS 442 (755)
T ss_dssp SSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHH
T ss_pred cchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 01 3334332 455543 2 2 23444443233367999999999999998886544
Q ss_pred hHHHHHHHHHHHHHHHHHHHhC-C---------CEEecCC----------------------------------------
Q psy10669 218 FKSYQAQVKANASHLSDEMIKR-G---------YHVVTGG---------------------------------------- 247 (337)
Q Consensus 218 ~~~y~~~v~~na~~l~~~L~~~-G---------~~v~~~~---------------------------------------- 247 (337)
++++.+++++++++++++|.+. | |++++..
T Consensus 443 g~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 522 (755)
T 2vyc_A 443 GLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFK 522 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccccccc
Confidence 7889999999999999999883 5 6655411
Q ss_pred ---C-----CCeEEEEEecCC---------CcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669 248 ---T-----DVHLILIDLRKN---------KLTGSKVELVLEEIAIACNKNT--GISLAA 288 (337)
Q Consensus 248 ---t-----~~h~v~V~~~~~---------~~~~~~~~~~L~~~gI~v~~~~--girig~ 288 (337)
+ |.+.+.+++... |+++.++.+.|+++||.+++.. .+|+-+
T Consensus 523 ~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~ 582 (755)
T 2vyc_A 523 DIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLF 582 (755)
T ss_dssp TCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEEC
T ss_pred ccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEE
Confidence 1 456778877643 3455999999999999998754 555543
No 77
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.33 E-value=1.1e-11 Score=118.92 Aligned_cols=247 Identities=10% Similarity=0.016 Sum_probs=150.3
Q ss_pred eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
+..+.++||. +|.|++++...+.+....+++. ..|. .++.....+.+++++|.+...- .++.+++| +.
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~l~~~l~~~l~~~~g~~~~~~-~~i~~~~g~~~ 113 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTE---YRGD---LGIRDLLAPRLAAFTGAPVDAR-DGLIITPGTQG 113 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCC---TTCC---HHHHHHHHHHHHHHHTSCCCTT-TSEEEESHHHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCC---CCCC---HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHH
Confidence 4455666655 8999999987654311111211 1233 2333333467888899742000 13555555 78
Q ss_pred hHHHHHHhhCCc----------------------------cc-------------------c---cccEEEEcCccc--c
Q psy10669 108 ANFAVCEKALPT----------------------------NN-------------------A---RFDFLSSGTTCY--S 135 (337)
Q Consensus 108 AN~~v~~aLl~~----------------------------~~-------------------a---~pklII~~~S~~--~ 135 (337)
||..++.+++++ .. + ++++|++..-.+ +
T Consensus 114 a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG 193 (407)
T 3nra_A 114 ALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAG 193 (407)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTC
T ss_pred HHHHHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCC
Confidence 998888988654 10 0 256665543233 4
Q ss_pred cccC---hHHHHHHhhhcCCeEEEeccccccccce------------------eeeeccC-----C---chhhh--hHHH
Q psy10669 136 RCLD---YARFRQICDETDSIMFADMSHISGLIAG------------------VKGVTKT-----G---EKILY--DYEE 184 (337)
Q Consensus 136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~~~-----G---g~i~~--~l~~ 184 (337)
...| +++|.++|+++|+++++|++|..+..++ +++|..| | |+++. ++.+
T Consensus 194 ~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 273 (407)
T 3nra_A 194 VVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIA 273 (407)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHH
T ss_pred cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHH
Confidence 6667 7788899999999999999998744431 1233322 2 66654 4666
Q ss_pred HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcc
Q psy10669 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLT 263 (337)
Q Consensus 185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~ 263 (337)
.+.....+... ++++...+++..++.+. ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++++...+.+
T Consensus 274 ~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 350 (407)
T 3nra_A 274 RMEKLQAIVSL-RAAGYSQAVLRGWFDEA-PGWMEDRIARHQAIRDELLHVLRGCEGVFARTP-QAGSYLFPRLPKLAVA 350 (407)
T ss_dssp HHHHHHHHHTS-SSCHHHHGGGGGTTCCC-TTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCC-SBSSEECCBCCCBSSC
T ss_pred HHHHHHhhhcc-CCChHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHhcCCCceeccC-CeeEEEEEeCCCCCCC
Confidence 55543333323 34445555544444321 1335778889999999999999986 8887642 3345677777765667
Q ss_pred hHHHHHHHh-hcCceeccCc--------ccchhhh
Q psy10669 264 GSKVELVLE-EIAIACNKNT--------GISLAAE 289 (337)
Q Consensus 264 ~~~~~~~L~-~~gI~v~~~~--------girig~~ 289 (337)
..++.+.|. ++||.+.+.. .|||+..
T Consensus 351 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~ 385 (407)
T 3nra_A 351 PAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS 385 (407)
T ss_dssp HHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC
Confidence 888888885 5799987632 5777643
No 78
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.32 E-value=9.9e-11 Score=113.57 Aligned_cols=245 Identities=12% Similarity=0.094 Sum_probs=159.3
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg 105 (337)
+..|.|...++-. +|.|.+++...+... ..+++. . ..++.....+.+++.+| .+. ..|.+++|
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~--~~~l~~~l~~~l~~~~g~~~~~----~~v~~~~g 127 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNY------F--NDDLYQAVIDWERKEHDYAVVK----EDILFIDG 127 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBC------C--CHHHHHHHHHHHHHHHCCCCCG----GGEEEESC
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCC------C--CHHHHHHHHHHHHHHhCCCCCH----HHEEEcCC
Confidence 4567777666544 899999998765431 112211 1 14555555567888888 433 24778777
Q ss_pred -chhHHHHHHhhCCc--------------------------------------------c--c--ccccEEEEcCccc--
Q psy10669 106 -SPANFAVCEKALPT--------------------------------------------N--N--ARFDFLSSGTTCY-- 134 (337)
Q Consensus 106 -t~AN~~v~~aLl~~--------------------------------------------~--~--a~pklII~~~S~~-- 134 (337)
+.||..++.+++++ + + .++++|++..-.+
T Consensus 128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~npt 207 (421)
T 3l8a_A 128 VVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPG 207 (421)
T ss_dssp HHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTT
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCC
Confidence 56998888998754 0 0 1257777653222
Q ss_pred ccc---cChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c----CC---chhhh---hH
Q psy10669 135 SRC---LDYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K----TG---EKILY---DY 182 (337)
Q Consensus 135 ~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~----~G---g~i~~---~l 182 (337)
+.. .++++|+++|+++|++|++|++|.-....| ++.|. | .| |+++. ++
T Consensus 208 G~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l 287 (421)
T 3l8a_A 208 GRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESL 287 (421)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHH
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHH
Confidence 355 467778899999999999999997532210 12222 2 12 44443 46
Q ss_pred HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCC
Q psy10669 183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 183 ~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
.+.+.........+++++..++++..++.+. ....++.++++.++.++|.+.|.+ .|+.+..+ ..+.+.++++...+
T Consensus 288 ~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~-~~~~~~~v~~~~~~ 365 (421)
T 3l8a_A 288 RRKFQYRQLANNQHEVPTVGMIATQAAFQYG-KPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP-EGTYLVWLDFSAYA 365 (421)
T ss_dssp HHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECC-SBSSEEEEECGGGT
T ss_pred HHHHHHHHHhcccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCC-CeeEEEEEeccccC
Confidence 6666554323345578888988888888763 233467888899999999999988 69988752 33556668887755
Q ss_pred cchHHHHHHH-hhcCceeccCc--------ccchhhh
Q psy10669 262 LTGSKVELVL-EEIAIACNKNT--------GISLAAE 289 (337)
Q Consensus 262 ~~~~~~~~~L-~~~gI~v~~~~--------girig~~ 289 (337)
.+..++.+.| +++||.+++-. .+||+..
T Consensus 366 ~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~ 402 (421)
T 3l8a_A 366 IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA 402 (421)
T ss_dssp CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC
T ss_pred CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec
Confidence 6677777777 46799997621 5777543
No 79
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.30 E-value=3.9e-10 Score=110.07 Aligned_cols=221 Identities=16% Similarity=0.128 Sum_probs=137.8
Q ss_pred cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-
Q psy10669 38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA- 116 (337)
Q Consensus 38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL- 116 (337)
+.+.+++.+.+++...+... +++.| ....+++ +.+++++|.++ .+.++||+.||..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~--------~~~~~-~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDG--------WLTTG-RFNDAFE----KKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHC--------CCBSC-HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcC--------CcCCC-hHHHHHH----HHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 56777899999998765431 12322 2344555 68899999874 688889999998888887
Q ss_pred --------CCc-------------------------------c---------c--c---cccEEEEcCcccccccChHHH
Q psy10669 117 --------LPT-------------------------------N---------N--A---RFDFLSSGTTCYSRCLDYARF 143 (337)
Q Consensus 117 --------l~~-------------------------------~---------~--a---~pklII~~~S~~~~~~d~~~l 143 (337)
+++ . + + ++++|++.+ ..+.+.|+++|
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~-~~g~~~~~~~i 177 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH-TLGNLFDLAEV 177 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC-GGGCCCCHHHH
T ss_pred hcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC-CCCChhcHHHH
Confidence 543 0 0 0 267787754 45677999999
Q ss_pred HHHhhhcCCeEEEeccccccccc----------eeeee---cc-----CCchhhh--h-HHHHHhh---ccCC-------
Q psy10669 144 RQICDETDSIMFADMSHISGLIA----------GVKGV---TK-----TGEKILY--D-YEEKINN---AVFP------- 192 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~----------g~~~T---~~-----~Gg~i~~--~-l~~~i~~---~~~p------- 192 (337)
.++|+++|+++++|++|+.|... .++.+ .| .||++++ + +.+.+.. ....
T Consensus 178 ~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (437)
T 3bb8_A 178 RRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGC 257 (437)
T ss_dssp HHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC------
T ss_pred HHHHHHcCCEEEEECccccCceECCeecccccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccccc
Confidence 99999999999999999987653 12222 12 3677765 2 3333221 1000
Q ss_pred ----------------------C---CCCCC--cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEe
Q psy10669 193 ----------------------S---LQGGP--HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVV 244 (337)
Q Consensus 193 ----------------------~---~~g~~--~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~ 244 (337)
+ ..|.. ..+..++++.+..+ ..+++.++..+++++|.+.|.+. |+.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 333 (437)
T 3bb8_A 258 DNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLE----RIEEFVEKRKANFKYLKDALQSCADFIEL 333 (437)
T ss_dssp ----------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHGGGGTTTEEC
T ss_pred ccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhccCCcccc
Confidence 0 00100 01222222222211 22456667789999999999885 77765
Q ss_pred cCCC-----CCeEEEEEecCC-CcchHHHHHHHhhcCceeccC
Q psy10669 245 TGGT-----DVHLILIDLRKN-KLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 245 ~~~t-----~~h~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~~ 281 (337)
.... ..+..++.+... +.+..++.+.|.+.||.++..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~ 376 (437)
T 3bb8_A 334 PEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLL 376 (437)
T ss_dssp CCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCC
T ss_pred CCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceecc
Confidence 4211 113345555432 457888999999999988753
No 80
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.30 E-value=1.4e-10 Score=109.98 Aligned_cols=241 Identities=12% Similarity=0.057 Sum_probs=158.6
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC-CCcceeecC-CCch
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPY-SGSP 107 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~-Sgt~ 107 (337)
.+.+.+.++-..++|.|++++...+.+ + ++.........+++.++++++.... .. .++.++ ||+.
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~-~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~v~~~~g~t~ 70 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG-H-----------TSPEFVSIFQRVLKNTRAVFKSAAASKS-QPFVLAGSGTL 70 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC-T-----------TSHHHHHHHHHHHHHHHHHTTCCGGGTC-EEEEEESCTTH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc-c-----------CCHHHHHHHHHHHHHHHHHhCCCCCCCC-ceEEEcCchHH
Confidence 355788899888999999998754221 1 1111112222345677888876410 00 145555 5589
Q ss_pred hHHHHHHhhC---Cc------------------------------cc-----------------c-cccEEEEcCcc--c
Q psy10669 108 ANFAVCEKAL---PT------------------------------NN-----------------A-RFDFLSSGTTC--Y 134 (337)
Q Consensus 108 AN~~v~~aLl---~~------------------------------~~-----------------a-~pklII~~~S~--~ 134 (337)
|+..++.+++ ++ .. . ++++|++..-. .
T Consensus 71 al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 150 (385)
T 2bkw_A 71 GWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTST 150 (385)
T ss_dssp HHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred HHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence 9988888886 43 10 0 26788776322 3
Q ss_pred ccccChHHHHHHhhhc--CCeEEEeccccccccc------e---eeeec-c-----CC-chhhh--hHHH-HHhh-----
Q psy10669 135 SRCLDYARFRQICDET--DSIMFADMSHISGLIA------G---VKGVT-K-----TG-EKILY--DYEE-KINN----- 188 (337)
Q Consensus 135 ~~~~d~~~l~eia~~~--ga~l~vD~AH~~Gli~------g---~~~T~-~-----~G-g~i~~--~l~~-~i~~----- 188 (337)
+...|+++|.++|+++ |+++++|++|..|... + ++++. | .| |+++. ++.+ .+++
T Consensus 151 G~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~ 230 (385)
T 2bkw_A 151 AVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGH 230 (385)
T ss_dssp TEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCC
T ss_pred CeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCC
Confidence 6788999999999999 9999999999987653 1 33333 3 24 55543 3433 3310
Q ss_pred ----------------ccCC---CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HhCCCEEecC-C
Q psy10669 189 ----------------AVFP---SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEM-IKRGYHVVTG-G 247 (337)
Q Consensus 189 ----------------~~~p---~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L-~~~G~~v~~~-~ 247 (337)
...+ ...++++.+.++++..++..+.+...++.+++..++.++|.+.| .+.|+++..+ +
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 310 (385)
T 2bkw_A 231 VHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYP 310 (385)
T ss_dssp CSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSS
T ss_pred CCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCc
Confidence 0001 11357888999999888887654336788899999999999999 8889988742 1
Q ss_pred ---CCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-------ccchh
Q psy10669 248 ---TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-------GISLA 287 (337)
Q Consensus 248 ---t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-------girig 287 (337)
...+++++.+.. ..++.+.|.+.||.+.... .+||+
T Consensus 311 ~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis 356 (385)
T 2bkw_A 311 SNMSAHGLTAVYVAD----PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIG 356 (385)
T ss_dssp STTBCSSCEEEECSC----HHHHHHHHHHTTEECBCCCCTTTGGGEEEEC
T ss_pred ccccCCceEEEecCC----HHHHHHHHHHCCeEEeCCCCcccCCCEEEEE
Confidence 246778887753 5677888888899987522 57777
No 81
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.30 E-value=2.7e-10 Score=108.07 Aligned_cols=244 Identities=14% Similarity=0.066 Sum_probs=150.4
Q ss_pred cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCC
Q psy10669 29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYS 104 (337)
Q Consensus 29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~S 104 (337)
.+..|.|...++- .+|.+.+++...+... ..+ |.......+++....+.+.+.+| .+. .++.+++
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~~~~~l~~~la~~~~~~~g~~~~~----~~v~~~~ 96 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTH------YTDSRGILELREKISELYKDKYKADIIP----DNIIITG 96 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHHHHHSSCCCCG----GGEEEES
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccC------CCCCCCCHHHHHHHHHHHHHHhCCCCCh----hhEEECC
Confidence 3456777666664 3789999998765431 111 22122234555333334444444 332 2466666
Q ss_pred C-chhHHHHHHhhCCc---------------------------------cc----c-cccEEEEc-Ccc-cccccChHHH
Q psy10669 105 G-SPANFAVCEKALPT---------------------------------NN----A-RFDFLSSG-TTC-YSRCLDYARF 143 (337)
Q Consensus 105 g-t~AN~~v~~aLl~~---------------------------------~~----a-~pklII~~-~S~-~~~~~d~~~l 143 (337)
| ++|+..++.+++++ .+ . ++++|++. +++ .+...|.+ |
T Consensus 97 g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l 175 (370)
T 2z61_A 97 GSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCDFTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-I 175 (370)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-H
T ss_pred ChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeCCCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-H
Confidence 6 78998888988764 00 0 25666664 333 36788888 9
Q ss_pred HHHhhhcCCeEEEeccccccccce----------------eeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669 144 RQICDETDSIMFADMSHISGLIAG----------------VKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~ 197 (337)
.++|+++|+++++|++|..+...+ +.++. | .| |+++. ++.+.+.....+. .++
T Consensus 176 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~ 254 (370)
T 2z61_A 176 YEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNL-FIS 254 (370)
T ss_dssp HHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHH-TSS
T ss_pred HHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhc-ccC
Confidence 999999999999999998765421 12332 2 12 56554 4666555432222 235
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh-hcCc
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE-EIAI 276 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~-~~gI 276 (337)
++++..+++..++..+.....++.++++.++.++|.+.|.+.|+++..+ ..+..+++++.. +..++.+.|. +.||
T Consensus 255 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~~~gi 330 (370)
T 2z61_A 255 APTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNP-IGAYYVFPNIGE---DGREFAYKLLKEKFV 330 (370)
T ss_dssp SCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCC-CBTTEECCBCSS---CHHHHHHHHHHHHCE
T ss_pred CCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCC-CcceEEEEecCC---CHHHHHHHHHHhCCE
Confidence 6677777766666441123446778889999999999999989887642 234556666654 5677777775 6899
Q ss_pred eeccCc--------ccchhhh
Q psy10669 277 ACNKNT--------GISLAAE 289 (337)
Q Consensus 277 ~v~~~~--------girig~~ 289 (337)
.+.+.. .+||+..
T Consensus 331 ~v~~g~~f~~~~~~~~Ri~~~ 351 (370)
T 2z61_A 331 ALTPGIGFGSKGKNYIRISYA 351 (370)
T ss_dssp ECEEGGGGCGGGSSBEEEECC
T ss_pred EEeCchhhCCCCCCEEEEEEe
Confidence 987532 4677644
No 82
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.30 E-value=1.9e-10 Score=114.82 Aligned_cols=238 Identities=11% Similarity=0.023 Sum_probs=151.4
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC-CCcce-eecCCCchhHHHHHHhhCC--
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCN-VQPYSGSPANFAVCEKALP-- 118 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~-v~~~Sgt~AN~~v~~aLl~-- 118 (337)
++.+.+++...+. .+...++.. +.......++|...++.++++||.+.+ ++ ++ +..++|+.||..++.++..
T Consensus 109 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~p~~~~le~~l~~~la~~~g~~~~~~~-v~~~~t~ggt~a~~~al~a~~~~g 184 (514)
T 3mad_A 109 DEHHIAFLNEVYA-LQSQSNPLH--PDLWPSTAKFEAEVVAMTAHMLGGDAAGGT-VCGTVTSGGTESLLLAMKTYRDWA 184 (514)
T ss_dssp CHHHHHHHHHHHH-HHTTCCTTC--TTTCHHHHHHHHHHHHHHHHHTTGGGGTSC-CEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH-HHhhcCCcc--cccChHHHHHHHHHHHHHHHHcCCCCccCC-cceEEcCcHHHHHHHHHHHHHHHh
Confidence 4666555554432 222222222 222334567887777899999998720 12 22 4445558899888887631
Q ss_pred --------c---------------------------------------c--cc-cccEEEEcCcc--cccccChHHHHHH
Q psy10669 119 --------T---------------------------------------N--NA-RFDFLSSGTTC--YSRCLDYARFRQI 146 (337)
Q Consensus 119 --------~---------------------------------------~--~a-~pklII~~~S~--~~~~~d~~~l~ei 146 (337)
+ + +. ++++|++.... .+...|+++|.+|
T Consensus 185 ~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l 264 (514)
T 3mad_A 185 RATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAAL 264 (514)
T ss_dssp HHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHH
T ss_pred hhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHH
Confidence 1 0 01 26777776433 4688999999999
Q ss_pred hhhcCCeEEEeccccccccc-----------------e---eeeeccC-------Cchhhh--hHHHHHh----------
Q psy10669 147 CDETDSIMFADMSHISGLIA-----------------G---VKGVTKT-------GEKILY--DYEEKIN---------- 187 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~Gli~-----------------g---~~~T~~~-------Gg~i~~--~l~~~i~---------- 187 (337)
|+++|++|++|++|+.+++. + ++++.+| .|+++. +......
T Consensus 265 a~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
T 3mad_A 265 AAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG 344 (514)
T ss_dssp HHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC
T ss_pred HHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC
Confidence 99999999999999865441 1 2223222 134433 2211111
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~ 266 (337)
....+.+.|+.....++++.+++..+....+++..+++.+++++|.+.|.+. |++++.. ...++.+ ...+.+..+
T Consensus 345 ~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~~~~~~--~~~~~~~~~ 420 (514)
T 3mad_A 345 LYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGD--PLWVIAV--ASDELNIYQ 420 (514)
T ss_dssp SEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSC--CSSEEEE--ECSSSCHHH
T ss_pred cccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCC--CeEEEEE--eCCCCCHHH
Confidence 1112445677888888888888877765667899999999999999999985 8998762 2334444 445567888
Q ss_pred HHHHHhhcCceeccCc---ccchhh
Q psy10669 267 VELVLEEIAIACNKNT---GISLAA 288 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~~---girig~ 288 (337)
+.+.|.+.||.+.... .+|+..
T Consensus 421 l~~~L~~~Gi~v~g~~~~~~~Ri~~ 445 (514)
T 3mad_A 421 VMEEMAGRGWRLNGLHRPPAFHVAL 445 (514)
T ss_dssp HHHHHHTTTCBCEEETTTTEEEEEC
T ss_pred HHHHHHhcCCEeccCCCCCeEEEEE
Confidence 8999998899884322 577754
No 83
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.27 E-value=1.5e-10 Score=110.95 Aligned_cols=197 Identities=10% Similarity=0.082 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhhCCc----------------------------------c
Q psy10669 76 EIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKALPT----------------------------------N 120 (337)
Q Consensus 76 ~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aLl~~----------------------------------~ 120 (337)
++...++++++++||++. .+.+ .|||.||.+++..+.+. .
T Consensus 35 ~~~~~~~~~l~~~~~~~~-----~v~~~~sgt~a~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 109 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEA-----AVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER 109 (379)
T ss_dssp HHHHHHHHHHHHHHTCSE-----EEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred HHHHHHHHHHHHHhCCCC-----EEEEcCChhHHHHHHHHhCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence 455556789999999874 4555 46688988777665321 0
Q ss_pred -----------c-----------c-cccEEEEcC--cccccccC---hHHHHHHhhhcCCeEEEeccccccccc------
Q psy10669 121 -----------N-----------A-RFDFLSSGT--TCYSRCLD---YARFRQICDETDSIMFADMSHISGLIA------ 166 (337)
Q Consensus 121 -----------~-----------a-~pklII~~~--S~~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------ 166 (337)
. . +|++|++.+ +..+...| +++|.++|+++|+++++|++|+ |...
T Consensus 110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~ 188 (379)
T 3ke3_A 110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKEL 188 (379)
T ss_dssp SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHH
T ss_pred cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccccccc
Confidence 0 0 267777653 33578888 8999999999999999999998 7554
Q ss_pred e---eeeeccC------C-chhhh--hHHHHHhh-ccCCC--------------------CCCCCcHHHHHHHHHHHHHH
Q psy10669 167 G---VKGVTKT------G-EKILY--DYEEKINN-AVFPS--------------------LQGGPHNHAIGAIATAMLQA 213 (337)
Q Consensus 167 g---~~~T~~~------G-g~i~~--~l~~~i~~-~~~p~--------------------~~g~~~~~~iaala~a~~e~ 213 (337)
+ ++++.+| | |++.. ++.+.+.+ ...+. ..+|++++.++|+..++..+
T Consensus 189 ~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~ 268 (379)
T 3ke3_A 189 GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA 268 (379)
T ss_dssp TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 1 2333322 3 45543 45555543 11111 13589999999999999888
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 214 QSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-TDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 214 ~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.+..+++++++..+++++|++.|.+.|+++.... ..+++++... ..+... ...+.|.+.||.+..
T Consensus 269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~-~~~~~~-~~~~~L~~~Gi~v~~ 334 (379)
T 3ke3_A 269 KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSY-TERDDM-HKGSAFAEAGLQIAA 334 (379)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEE-CSCHHH-HSSHHHHHTTCCCEE
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEc-cCCcch-HHHHHHHHCCeEEeC
Confidence 6544689999999999999999999999987632 2234333222 222111 225677888998764
No 84
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.27 E-value=6.4e-10 Score=104.72 Aligned_cols=224 Identities=13% Similarity=0.075 Sum_probs=147.2
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
+..|.|-..+|.. +|.|.+++...+.. + .+++.. ...+++ +.++++++.+.. ++.+++| +
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~-~-~~y~~~-------~~~~l~----~~la~~~~~~~~----~i~~~~g~t 88 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKN-L-GVYPDV-------NYRRLN----KSIENYLKLKDI----GIVLGNGAS 88 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHG-G-GSCCCT-------TCHHHH----HHHHHHHTCCSC----EEEEESSHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCCCCc-------cHHHHH----HHHHHHhCCCcc----eEEEcCCHH
Confidence 4567777777876 89999999876543 2 233321 123444 678899998652 5777666 6
Q ss_pred hhHHHHHHhhCCc-----------------------------c-------cc---c-ccEEEEcCccc--ccccC---hH
Q psy10669 107 PANFAVCEKALPT-----------------------------N-------NA---R-FDFLSSGTTCY--SRCLD---YA 141 (337)
Q Consensus 107 ~AN~~v~~aLl~~-----------------------------~-------~a---~-pklII~~~S~~--~~~~d---~~ 141 (337)
.|+..++.++ +. . +. + +++|++..-.+ +...+ ++
T Consensus 89 ~al~~~~~~~-d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~ 167 (361)
T 3ftb_A 89 EIIELSISLF-EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFI 167 (361)
T ss_dssp HHHHHHHTTC-SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTTBCCCHHHHH
T ss_pred HHHHHHHHHc-CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 7888877776 32 0 00 1 57777653333 45555 44
Q ss_pred HHHHHhhhcCCeEEEecccccccc-------c--------eeeeec-c-------CCchhh-h--hHHHHHhhccCCCCC
Q psy10669 142 RFRQICDETDSIMFADMSHISGLI-------A--------GVKGVT-K-------TGEKIL-Y--DYEEKINNAVFPSLQ 195 (337)
Q Consensus 142 ~l~eia~~~ga~l~vD~AH~~Gli-------~--------g~~~T~-~-------~Gg~i~-~--~l~~~i~~~~~p~~~ 195 (337)
+|.++|+++|+++++|++|.-+.. . .++++. | ..|+++ . ++.+.+.....+
T Consensus 168 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~--- 244 (361)
T 3ftb_A 168 HVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP--- 244 (361)
T ss_dssp HHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT---
T ss_pred HHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC---
Confidence 566777899999999999974333 1 122332 2 126655 4 577777655333
Q ss_pred CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
.++++...+++..++.+ ....++.++++.++.++|.+.|.+. |++ +.. .+...+++.+.. .+..++.+.|.+
T Consensus 245 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~l~~~l~~ 318 (361)
T 3ftb_A 245 WNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFS--PHANFVLCRLEN--ISGEKLYDSLLK 318 (361)
T ss_dssp TCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEC--CSSSEEEEEESS--SCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecC--CCCeEEEEEcCC--CCHHHHHHHHHH
Confidence 36777888777777654 2345678889999999999999986 787 664 445567777765 467888888888
Q ss_pred cCceecc
Q psy10669 274 IAIACNK 280 (337)
Q Consensus 274 ~gI~v~~ 280 (337)
.||.+.+
T Consensus 319 ~gi~v~~ 325 (361)
T 3ftb_A 319 EDIVIRR 325 (361)
T ss_dssp TTEECEE
T ss_pred CCeEEee
Confidence 8999876
No 85
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.27 E-value=4.2e-10 Score=106.62 Aligned_cols=236 Identities=17% Similarity=0.206 Sum_probs=146.3
Q ss_pred cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCC
Q psy10669 29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYS 104 (337)
Q Consensus 29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~S 104 (337)
.+..|.|...+|.. +|.|.+++...+... ..+++. .| .+++....+.+.+.+| .+. .++.+++
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~----~~----~~lr~~la~~~~~~~~~~~~~----~~i~~t~ 88 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP----DG----SLLSQATAEFYADRYGYQARP----EWIFPIP 88 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC----SS----CCHHHHHHHHHHHHHCCCCCG----GGEEEES
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC----CC----HHHHHHHHHHHHHHhCCCCCH----HHEEEeC
Confidence 34567777777654 899999998765531 122222 12 2333222234444444 333 2566766
Q ss_pred C-chhHHHHHHhhCCc------------------------------c-------cc-----cccEEEEcCccc--ccccC
Q psy10669 105 G-SPANFAVCEKALPT------------------------------N-------NA-----RFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 105 g-t~AN~~v~~aLl~~------------------------------~-------~a-----~pklII~~~S~~--~~~~d 139 (337)
| +.|+..++.+++++ . +. ++++|++....+ +...+
T Consensus 89 g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 168 (377)
T 3fdb_A 89 DVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFA 168 (377)
T ss_dssp CHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCC
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence 6 78888888988754 0 00 156666653333 45554
Q ss_pred ---hHHHHHHhhhcCCeEEEeccccccccce-----------------eeeec-c-------CCch-hhh--hHHHHHhh
Q psy10669 140 ---YARFRQICDETDSIMFADMSHISGLIAG-----------------VKGVT-K-------TGEK-ILY--DYEEKINN 188 (337)
Q Consensus 140 ---~~~l~eia~~~ga~l~vD~AH~~Gli~g-----------------~~~T~-~-------~Gg~-i~~--~l~~~i~~ 188 (337)
+++|.++|+++|+++++|++|......+ +.++. | ..|+ +.. ++.+.+..
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~ 248 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQ 248 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHH
Confidence 4556677999999999999998732211 12232 2 1253 332 46666654
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669 189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~~~~~ 266 (337)
. .+....+++++..++...++.+. ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++++...+.+...
T Consensus 249 ~-~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 325 (377)
T 3fdb_A 249 L-SPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM-QATYLMWIDFRDTTIEGSP 325 (377)
T ss_dssp S-CHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC-SBCSEEEEECTTSCCCSCH
T ss_pred H-HHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC-CeeEEEEEECcccCCCHHH
Confidence 3 23334577888888877777664 2345788899999999999999885 9988752 3344557888765545444
Q ss_pred HHHHHhhcCceecc
Q psy10669 267 VELVLEEIAIACNK 280 (337)
Q Consensus 267 ~~~~L~~~gI~v~~ 280 (337)
+...++++||.+.+
T Consensus 326 ~~~l~~~~gi~v~~ 339 (377)
T 3fdb_A 326 SEFFIEKAKVAMND 339 (377)
T ss_dssp HHHHHHHHCEECEE
T ss_pred HHHHHHhCCEEecC
Confidence 55666677999976
No 86
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.27 E-value=7.3e-11 Score=113.99 Aligned_cols=229 Identities=12% Similarity=0.039 Sum_probs=138.2
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN 109 (337)
.-.....++.+++.|.+.+++.. +.+. ..++.-.|+ ++...+++| +++++++|.+. .+.++||+.||
T Consensus 27 ~~~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~ 93 (398)
T 1gc0_A 27 ALVPPVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAI 93 (398)
T ss_dssp BSSCCBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHH
T ss_pred CcCCCccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHH
Confidence 44677999999999999888752 2322 122222222 344455666 58889999874 68999999999
Q ss_pred HHHHHhhCCc--------------------------------------cc--c---cccEEEEcCcc--cccccChHHHH
Q psy10669 110 FAVCEKALPT--------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYARFR 144 (337)
Q Consensus 110 ~~v~~aLl~~--------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~l~ 144 (337)
..++.+++++ .+ + ++++|++...+ .+...|+++|.
T Consensus 94 ~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~ 173 (398)
T 1gc0_A 94 TSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVA 173 (398)
T ss_dssp HHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHH
Confidence 9888988654 00 0 26788876333 35788999999
Q ss_pred HHhhhcCCeEEEeccccccccc--------eeeee-cc-----C---Cchhhh--h-HHHHHhhccCCC-CCCCCcHHHH
Q psy10669 145 QICDETDSIMFADMSHISGLIA--------GVKGV-TK-----T---GEKILY--D-YEEKINNAVFPS-LQGGPHNHAI 203 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~-----~---Gg~i~~--~-l~~~i~~~~~p~-~~g~~~~~~i 203 (337)
++|+++|+++++|++|..|... .++.+ +| . ||+++. + +.+.+..... + ..++.++...
T Consensus 174 ~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 252 (398)
T 1gc0_A 174 KIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLK-DMTGAVLSPHDA 252 (398)
T ss_dssp HHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHH-HHTCCCCCHHHH
T ss_pred HHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhh-ccCCCCCCHHHH
Confidence 9999999999999999988754 12223 22 1 566654 3 3334544322 2 2345565555
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC---------------CEEecC--CCCCeEEEEEecCCCcchHH
Q psy10669 204 GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---------------YHVVTG--GTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 204 aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G---------------~~v~~~--~t~~h~v~V~~~~~~~~~~~ 266 (337)
++...++. ..+.+.++..+|++.+++.|.+.+ +++... .+..+++.+.+.. ....
T Consensus 253 ~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~ 324 (398)
T 1gc0_A 253 ALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG---GIGA 324 (398)
T ss_dssp HHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT---HHHH
T ss_pred HHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC---CHHH
Confidence 44444432 345778889999999999998742 222221 1356777777642 2456
Q ss_pred HHHHHhhcCceecc
Q psy10669 267 VELVLEEIAIACNK 280 (337)
Q Consensus 267 ~~~~L~~~gI~v~~ 280 (337)
+.+.|++.||.+..
T Consensus 325 ~~~~l~~~~i~~~~ 338 (398)
T 1gc0_A 325 GRRFMNALQLFSRA 338 (398)
T ss_dssp HHHHHHHCSSSEEC
T ss_pred HHHHHHhCCCceec
Confidence 78888888887754
No 87
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.27 E-value=1.4e-11 Score=117.27 Aligned_cols=217 Identities=10% Similarity=0.063 Sum_probs=135.2
Q ss_pred CCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-C
Q psy10669 39 ENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-L 117 (337)
Q Consensus 39 en~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l 117 (337)
...++|.+++++...+...+ |.......++| +++++++|.++ .+.+.|||.||..++.++ +
T Consensus 12 ~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l~~l~~ 73 (373)
T 3frk_A 12 HDEIEYEIKFKFEEIYKRNW---------FILGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLILKGYDI 73 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTC---------CSSSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHHHHHCCC---------ccCCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCC
Confidence 33457888888876654321 22233445565 68899999874 577788899998888998 6
Q ss_pred Cc----------------------------------------ccc-----cccEEEEcCcccccccChHHHHHHhhhcCC
Q psy10669 118 PT----------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFRQICDETDS 152 (337)
Q Consensus 118 ~~----------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~eia~~~ga 152 (337)
++ .+. ++++|++. ...+...|+++|.++|+++|+
T Consensus 74 ~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-n~~G~~~~l~~i~~l~~~~~~ 152 (373)
T 3frk_A 74 GFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAIIAV-HLYGQPADMDEIKRIAKKYNL 152 (373)
T ss_dssp CTTCEEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEEEE-CCTTCCCCHHHHHHHHHHHTC
T ss_pred CCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEEEE-CCCcCcccHHHHHHHHHHcCC
Confidence 54 111 26777764 356788999999999999999
Q ss_pred eEEEeccccccccc----------eeeee--c-c------CCchhhh---hHHHHHhhccCCCC--------CCCCcHHH
Q psy10669 153 IMFADMSHISGLIA----------GVKGV--T-K------TGEKILY---DYEEKINNAVFPSL--------QGGPHNHA 202 (337)
Q Consensus 153 ~l~vD~AH~~Gli~----------g~~~T--~-~------~Gg~i~~---~l~~~i~~~~~p~~--------~g~~~~~~ 202 (337)
++++|++|+.|..- .++++ . | .||++++ ++.+.+......+. .|.. ..
T Consensus 153 ~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~--~~ 230 (373)
T 3frk_A 153 KLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFN--SR 230 (373)
T ss_dssp EEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCB--CC
T ss_pred EEEEECCcccCCEECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCcccccccc--CC
Confidence 99999999987642 12222 1 2 2566664 35554443211111 1100 01
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC----CCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669 203 IGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG----TDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278 (337)
Q Consensus 203 iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~----t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v 278 (337)
+.++..++.......++++.++..++++++.+.|.+.++.+.... .-.+.+++... +..++.+.|.+.||.+
T Consensus 231 ~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~gI~v 306 (373)
T 3frk_A 231 LDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE----KRDELQKYLNNNGIGT 306 (373)
T ss_dssp CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES----SHHHHHHHHHHTTBCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC----CHHHHHHHHHHCCCCc
Confidence 112222222222234567888899999999999988775553211 11244444432 5778889999889998
Q ss_pred cc
Q psy10669 279 NK 280 (337)
Q Consensus 279 ~~ 280 (337)
+.
T Consensus 307 ~~ 308 (373)
T 3frk_A 307 LI 308 (373)
T ss_dssp BC
T ss_pred cc
Confidence 85
No 88
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.27 E-value=4.6e-10 Score=108.28 Aligned_cols=248 Identities=11% Similarity=0.105 Sum_probs=146.1
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCC-CCCcceeecCCC-
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDP-EQWGCNVQPYSG- 105 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~-~~~~~~v~~~Sg- 105 (337)
+..|.|...++- .+|.|.+++...+......+ |.......+++....+.+.+.+|.+. ++ .+|.+++|
T Consensus 37 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~~~~~~g~~~~~~--~~v~~t~g~ 108 (412)
T 2x5d_A 37 EDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHG------YSTSRGIPRLRRAISHWYRDRYDVQIDPE--SEAIVTIGS 108 (412)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHTC---------------CTTCCHHHHHHHHHHHHHHHCCCCCTT--TSEEEESCH
T ss_pred CCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCcHHHHHHHHHHHHHHhCCCCCCC--cCEEEcCCh
Confidence 345777666664 38999999976543210111 21111224555333334444448521 10 04666555
Q ss_pred chhHHHHHHhhCCc--------------------------------c---------c--c---cccEEEEcCccc--ccc
Q psy10669 106 SPANFAVCEKALPT--------------------------------N---------N--A---RFDFLSSGTTCY--SRC 137 (337)
Q Consensus 106 t~AN~~v~~aLl~~--------------------------------~---------~--a---~pklII~~~S~~--~~~ 137 (337)
+.|+..++.+++++ . + + ++++|++..-.+ +..
T Consensus 109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~ 188 (412)
T 2x5d_A 109 KEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQC 188 (412)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCc
Confidence 78998888988754 1 0 0 267777742222 344
Q ss_pred cC---hHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG---EKILY--DYEEKIN 187 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G---g~i~~--~l~~~i~ 187 (337)
.+ +++|.++|+++|+++++|++|..+... .+++|. | .| |+++. ++.+.+.
T Consensus 189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~ 268 (412)
T 2x5d_A 189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALA 268 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHH
Confidence 44 567888999999999999999875431 112332 2 13 56654 4655554
Q ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCc---ch
Q psy10669 188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKL---TG 264 (337)
Q Consensus 188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~---~~ 264 (337)
.... ....+++++..+++..++... ....++.++++.++.++|.+.|.+.|+++..+ ..+..+++++.. ++ +.
T Consensus 269 ~~~~-~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~-~~~~~~~ 344 (412)
T 2x5d_A 269 RIKS-YHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGWMVENP-KASMYVWAKIPE-PYAHLGS 344 (412)
T ss_dssp HHHH-HHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC-SBSSEEEEECCT-TTGGGCH
T ss_pred HHHh-hhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC-CeeeEEEEEcCC-ccCCCCH
Confidence 3321 112356667777766666543 33457788899999999999999888887642 235567787743 33 46
Q ss_pred HHHHHHH-hhcCceeccCc--------ccchhhh
Q psy10669 265 SKVELVL-EEIAIACNKNT--------GISLAAE 289 (337)
Q Consensus 265 ~~~~~~L-~~~gI~v~~~~--------girig~~ 289 (337)
.++.+.| ++.||.+.+.. .|||+..
T Consensus 345 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~ 378 (412)
T 2x5d_A 345 LEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI 378 (412)
T ss_dssp HHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC
T ss_pred HHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEec
Confidence 6677776 45799997532 5777643
No 89
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.27 E-value=4.3e-10 Score=107.67 Aligned_cols=243 Identities=13% Similarity=0.098 Sum_probs=155.1
Q ss_pred cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-
Q psy10669 31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG- 105 (337)
Q Consensus 31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg- 105 (337)
..|.|...++- .+|.|.+++...+.+. ..+++ .+ ..+++....+.+.+.+| .+. .+|.+++|
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~-----~~---~~~l~~~la~~l~~~~g~~~~~----~~v~~t~g~ 98 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYT-----GP---TEEYKKTVKKWMKDRHQWDIQT----DWIINTAGV 98 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSB-----CC---CHHHHHHHHHHHHHHHCCCCCG----GGEEEESSH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCC-----CC---cHHHHHHHHHHHHHHhCCCCCh----hhEEEcCCH
Confidence 56777666663 3799999998765431 11221 12 34555443445555567 433 25777777
Q ss_pred chhHHHHHHhhCCc------------------------------c-------c-----------ccccEEEEcCccc--c
Q psy10669 106 SPANFAVCEKALPT------------------------------N-------N-----------ARFDFLSSGTTCY--S 135 (337)
Q Consensus 106 t~AN~~v~~aLl~~------------------------------~-------~-----------a~pklII~~~S~~--~ 135 (337)
++|+..++.+++++ . . .++++|++..-.+ +
T Consensus 99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 178 (399)
T 1c7n_A 99 VPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVG 178 (399)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTT
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCC
Confidence 78988888998654 0 0 1257777643233 4
Q ss_pred cccC---hHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c-------CCchhhh---hHH
Q psy10669 136 RCLD---YARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K-------TGEKILY---DYE 183 (337)
Q Consensus 136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~-------~Gg~i~~---~l~ 183 (337)
...| +++|.++|+++|++|++|++|..+...+ +.+|. | ..|+++. ++.
T Consensus 179 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 258 (399)
T 1c7n_A 179 RVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIR 258 (399)
T ss_dssp BCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHH
Confidence 6666 7888899999999999999998633210 12232 2 1255553 366
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-C-CCEEecCCCCCeEEEEEecCCC
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-R-GYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~-G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
+.+.....+...+++++...+++..++.+. ....++.++++.++.++|.+.|.+ . |+++..+ ..+..+++++...+
T Consensus 259 ~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~ 336 (399)
T 1c7n_A 259 ERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLI-EGTYLQWIDFRALK 336 (399)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCC-SBSSEEEEECGGGC
T ss_pred HHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecC-CceEEEEEEcccCC
Confidence 666654444434567777877777777653 234567788899999999999988 4 8877642 33445568886544
Q ss_pred cchHHHHHHHh-hcCceeccCc--------ccchhh
Q psy10669 262 LTGSKVELVLE-EIAIACNKNT--------GISLAA 288 (337)
Q Consensus 262 ~~~~~~~~~L~-~~gI~v~~~~--------girig~ 288 (337)
.+..++.+.|. +.||.+.+.. .|||+.
T Consensus 337 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~ 372 (399)
T 1c7n_A 337 MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINL 372 (399)
T ss_dssp CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEEC
T ss_pred CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEe
Confidence 56777888885 7899987532 467754
No 90
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.26 E-value=5.3e-11 Score=113.28 Aligned_cols=217 Identities=12% Similarity=0.060 Sum_probs=138.8
Q ss_pred eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669 36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK 115 (337)
Q Consensus 36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a 115 (337)
-++.+.++|++.+++...+.+. + |.......++| +++++++|.++ .+.+.||+.|+..++.+
T Consensus 8 ~~~~~~~~~~v~~a~~~~~~~~--------~-~~~~~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~al~~ 69 (367)
T 3nyt_A 8 KNQQARIKDKIDAGIQRVLRHG--------Q-YILGPEVTELE----DRLADFVGAKY-----CISCANGTDALQIVQMA 69 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC--------C-CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHhcC--------C-ccCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHH
Confidence 3344455788888887665432 1 22233455665 68889999874 57778889999888888
Q ss_pred h-CCc----------------------------------------ccc-----cccEEEEcCcccccccChHHHHHHhhh
Q psy10669 116 A-LPT----------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFRQICDE 149 (337)
Q Consensus 116 L-l~~----------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~eia~~ 149 (337)
+ +++ .+. ++++|+.. ..++...|+++|.++|++
T Consensus 70 ~~~~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~-~~~G~~~~~~~i~~la~~ 148 (367)
T 3nyt_A 70 LGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPV-SLYGQCADFDAINAIASK 148 (367)
T ss_dssp TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEECCB-CGGGCCCCHHHHHHHHHH
T ss_pred hCCCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEEee-CCccChhhHHHHHHHHHH
Confidence 8 543 111 25777754 357889999999999999
Q ss_pred cCCeEEEeccccccccc----------eeeee---cc------CCchhhh---hHHHHHhhccCC-----------CCCC
Q psy10669 150 TDSIMFADMSHISGLIA----------GVKGV---TK------TGEKILY---DYEEKINNAVFP-----------SLQG 196 (337)
Q Consensus 150 ~ga~l~vD~AH~~Gli~----------g~~~T---~~------~Gg~i~~---~l~~~i~~~~~p-----------~~~g 196 (337)
+|+++++|++|+.|... .++++ +| .||++++ ++.+.+...... +...
T Consensus 149 ~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~ 228 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNS 228 (367)
T ss_dssp TTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBC
T ss_pred cCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCC
Confidence 99999999999987652 12333 22 1566665 365555442221 1112
Q ss_pred CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC----CCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG----TDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~----t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
..+ +..++++.+. + ...++..++..++++++.+.|.+.|+.+.... ...|+.++.+. +..++.+.|.
T Consensus 229 ~~~-~~~aa~~~~~--l--~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~ 299 (367)
T 3nyt_A 229 RLD-TLQAAILLPK--L--EIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD----NRESVQASLK 299 (367)
T ss_dssp CCC-HHHHHHHHHH--H--HTHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS----SHHHHHHHHH
T ss_pred Ccc-HHHHHHHHHH--H--HHHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC----CHHHHHHHHH
Confidence 222 2223322222 2 23456778888999999999999887664311 22345555543 5678888999
Q ss_pred hcCceecc
Q psy10669 273 EIAIACNK 280 (337)
Q Consensus 273 ~~gI~v~~ 280 (337)
+.||.+..
T Consensus 300 ~~GI~~~~ 307 (367)
T 3nyt_A 300 AAGVPTAV 307 (367)
T ss_dssp HHTCCCBC
T ss_pred HCCCceec
Confidence 88998764
No 91
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.25 E-value=4.8e-10 Score=108.61 Aligned_cols=247 Identities=12% Similarity=0.118 Sum_probs=153.2
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg 105 (337)
...|.|...+|.. +|.|++++...+.+....+++... | ..+++....+.+.+.+|. +. .+|.+++|
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g---~~~lr~~la~~~~~~~g~~~~~----~~i~~t~g 113 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLD---G---LPELKQEASRFAKLFVNIDIPA----RACVPTVG 113 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTT---C---CHHHHHHHHHHHHHHHCCCCCG----GGEEEESH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCC---C---hHHHHHHHHHHHHHhhCCCCCc----ccEEEeCC
Confidence 4567777777665 899999998776532112332211 1 234443222333333342 33 25777776
Q ss_pred -chhHHHHHHhhC--C-----c----------------------------------------c-c--ccccEEEEc-Ccc
Q psy10669 106 -SPANFAVCEKAL--P-----T----------------------------------------N-N--ARFDFLSSG-TTC 133 (337)
Q Consensus 106 -t~AN~~v~~aLl--~-----~----------------------------------------~-~--a~pklII~~-~S~ 133 (337)
+.|+..++.+++ + . + + .++++|++. +.+
T Consensus 114 ~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~n 193 (437)
T 3g0t_A 114 SMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNN 193 (437)
T ss_dssp HHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCT
T ss_pred HHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCC
Confidence 678888888886 2 2 0 1 126777663 433
Q ss_pred -cccccC---hHHHHHHhhhcCCeEEEecccccccc-------------c---------eeeeec-c----C---Cchhh
Q psy10669 134 -YSRCLD---YARFRQICDETDSIMFADMSHISGLI-------------A---------GVKGVT-K----T---GEKIL 179 (337)
Q Consensus 134 -~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli-------------~---------g~~~T~-~----~---Gg~i~ 179 (337)
.+...+ +++|.++|+++|++|++|++|..+.. . .++++. | . .|+++
T Consensus 194 ptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 273 (437)
T 3g0t_A 194 PTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLM 273 (437)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEE
Confidence 345665 55677889999999999999974211 1 112332 2 1 25555
Q ss_pred h--hHHH-H-----------------HhhccCCCCCCCCcHHHHHHHHHHHHHHhc--hhhHHHHHHHHHHHHHHHHHHH
Q psy10669 180 Y--DYEE-K-----------------INNAVFPSLQGGPHNHAIGAIATAMLQAQS--DEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 180 ~--~l~~-~-----------------i~~~~~p~~~g~~~~~~iaala~a~~e~~~--~~~~~y~~~v~~na~~l~~~L~ 237 (337)
. ++.+ . +..... ....++++...+++..++..... ...++.++++.++.+++.+.|.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (437)
T 3g0t_A 274 ISGKLYEREYPDLEESFGRLRFGEALSSSALY-ALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFL 352 (437)
T ss_dssp ECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHH-HHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECHHHhhhhhhcccccccccchhHHHHHHHHh-hhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4544 4 433211 11346677777777777766421 1167889999999999999999
Q ss_pred hCCCEEe------cCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--------ccchhhh
Q psy10669 238 KRGYHVV------TGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--------GISLAAE 289 (337)
Q Consensus 238 ~~G~~v~------~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--------girig~~ 289 (337)
+.|+++. .....++.+++++. +.+..++.+.|.+.||.+.+-. .+||+..
T Consensus 353 ~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~ 416 (437)
T 3g0t_A 353 DNGFNIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS 416 (437)
T ss_dssp TTTEEESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS
T ss_pred HcCCEEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe
Confidence 9999887 22245677888887 5678888899988899987543 4787644
No 92
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.25 E-value=6.2e-10 Score=106.03 Aligned_cols=228 Identities=14% Similarity=0.131 Sum_probs=145.8
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
...|.|...++-. +|.+.+++...+.. ... |.......+++ +.++++++.+.. ++.+++| +
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~------y~~~~~~~~l~----~~la~~~~~~~~----~v~~~~g~~ 88 (381)
T 1v2d_A 25 LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQ------YAPPAGLPALR----EALAEEFAVEPE----SVVVTSGAT 88 (381)
T ss_dssp HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCS------CCCTTCCHHHH----HHHHHHHTSCGG----GEEEESSHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcC------CCCCCCCHHHH----HHHHHhcCCChh----hEEEcCChH
Confidence 4567777766653 79999999876542 111 21111223444 577889998752 4666665 7
Q ss_pred hhHHHHHHhhCCc------------------------------c---c-----------c---cccEEEEcCccc--ccc
Q psy10669 107 PANFAVCEKALPT------------------------------N---N-----------A---RFDFLSSGTTCY--SRC 137 (337)
Q Consensus 107 ~AN~~v~~aLl~~------------------------------~---~-----------a---~pklII~~~S~~--~~~ 137 (337)
.|+..++.+++++ . . + ++++|++..-.+ +..
T Consensus 89 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~ 168 (381)
T 1v2d_A 89 EALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLV 168 (381)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCc
Confidence 8998888888653 1 0 0 157777652222 344
Q ss_pred cC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-------CCchhhh--hHHHHHhhcc
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--DYEEKINNAV 190 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~ 190 (337)
.+ +++|.++|+++|+++++|++|..+..+ .++++. | +.|+++. ++.+.+....
T Consensus 169 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 248 (381)
T 1v2d_A 169 FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMR 248 (381)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHH
Confidence 44 778889999999999999999864331 112222 2 1256554 4555544321
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQ-SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~-~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
. ....+++++..+++..++.... ....++.++++.++.++|.+.|.+.|+++... ..+..+++++... + +.+
T Consensus 249 ~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~--~---~~~ 321 (381)
T 1v2d_A 249 Q-WTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVP-EGTYFLMAELPGW--D---AFR 321 (381)
T ss_dssp H-HHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECC-SBSSEEEEECTTC--C---HHH
T ss_pred h-hcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC-CcceEEEEecChH--h---HHH
Confidence 1 1123556677777777776542 33457889999999999999999999998752 2245677777543 2 777
Q ss_pred HHhhcCceecc
Q psy10669 270 VLEEIAIACNK 280 (337)
Q Consensus 270 ~L~~~gI~v~~ 280 (337)
.|.+.||.+.+
T Consensus 322 ~l~~~gi~v~~ 332 (381)
T 1v2d_A 322 LVEEARVALIP 332 (381)
T ss_dssp HHHHTCEECEE
T ss_pred HHHhCCEEEec
Confidence 88889999875
No 93
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.24 E-value=6.6e-10 Score=105.93 Aligned_cols=248 Identities=14% Similarity=0.040 Sum_probs=148.7
Q ss_pred cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669 29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG- 105 (337)
Q Consensus 29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg- 105 (337)
.+..|.|...++. .+|.+.+++...+.+. ..+ |....-..+++....+.+.+.+|.+... .+|.+++|
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~ 99 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTR------YGPAAGEPRLREAIAQKLQRDNGLCYGA--DNILVTNGG 99 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHH
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCC------CCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCH
Confidence 3456777666664 3799999988765331 111 2222223455544445666666753210 25777776
Q ss_pred chhHHHHHHhhCCc-------------------------------c----------c--c---cccEEEEc-Ccc-cccc
Q psy10669 106 SPANFAVCEKALPT-------------------------------N----------N--A---RFDFLSSG-TTC-YSRC 137 (337)
Q Consensus 106 t~AN~~v~~aLl~~-------------------------------~----------~--a---~pklII~~-~S~-~~~~ 137 (337)
++|+..++.+++++ . + + ++++|++. .++ .+..
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 179 (388)
T 1j32_A 100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMV 179 (388)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcC
Confidence 78998888988654 0 0 0 25667655 322 2444
Q ss_pred c---ChHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC---chhhh--hHHHHH
Q psy10669 138 L---DYARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG---EKILY--DYEEKI 186 (337)
Q Consensus 138 ~---d~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G---g~i~~--~l~~~i 186 (337)
. ++++|.++|+++|+++++|++|..+... .+.++. | .| |+++. ++.+.+
T Consensus 180 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l 259 (388)
T 1j32_A 180 YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAA 259 (388)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHH
Confidence 3 4778889999999999999999764331 122332 2 13 55554 466655
Q ss_pred hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchH
Q psy10669 187 NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~ 265 (337)
.....+...+ +++...++...++... ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++++...+.+..
T Consensus 260 ~~~~~~~~~~-~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 336 (388)
T 1j32_A 260 TKIQGHSTSN-VCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKP-DGAFYMFPSIAKTGRSSL 336 (388)
T ss_dssp HHHHHTTTCS-CCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC-CBTTEECCBCGGGTCCHH
T ss_pred HHHHhhcccC-CCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-CeeEEEEEecCCCCCCHH
Confidence 5433333333 3444444444444322 3345678889999999999999986 8887642 234455566654345677
Q ss_pred HHHHHHhh-cCceeccC------cccchhh
Q psy10669 266 KVELVLEE-IAIACNKN------TGISLAA 288 (337)
Q Consensus 266 ~~~~~L~~-~gI~v~~~------~girig~ 288 (337)
++.+.|.+ .||.+.+- ..+||+.
T Consensus 337 ~~~~~l~~~~gi~v~~g~~~~~~~~iRis~ 366 (388)
T 1j32_A 337 DFCSELLDQHQVATVPGAAFGADDCIRLSY 366 (388)
T ss_dssp HHHHHHHHHHCEECEEGGGGTCTTBEEEEC
T ss_pred HHHHHHHHhCCEEEeChhhhCCCCcEEEEe
Confidence 78877764 79998753 2577764
No 94
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.24 E-value=3.4e-10 Score=113.52 Aligned_cols=217 Identities=13% Similarity=0.078 Sum_probs=133.5
Q ss_pred CccchHHHHHHHHHHHHHhhcCCCCC-CCcceeecCCCchhHHHHHHhhCC---------------c-------------
Q psy10669 69 GGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPYSGSPANFAVCEKALP---------------T------------- 119 (337)
Q Consensus 69 ~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~Sgt~AN~~v~~aLl~---------------~------------- 119 (337)
.......++|..+.+.++++||.+.. .| .+..++||.||+.++.++.. .
T Consensus 128 ~~~p~~~~le~~~~~~l~~~~g~~~~~~~--~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~ 205 (511)
T 3vp6_A 128 EIAPVFVLMEQITLKKMREIVGWSSKDGD--GIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI 205 (511)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCSSSCE--EEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred ccCchHHHHHHHHHHHHHHHhCCCCCCCc--eEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHH
Confidence 33455678998888999999999841 12 34445558998877665521 1
Q ss_pred ------------------------------c--cc-c------ccEEEEc--CcccccccChHHHHHHhhhcCCeEEEec
Q psy10669 120 ------------------------------N--NA-R------FDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADM 158 (337)
Q Consensus 120 ------------------------------~--~a-~------pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~ 158 (337)
+ +. . |++|+++ .+..+..-|+++|.+||+++|++++||+
T Consensus 206 ~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~ 285 (511)
T 3vp6_A 206 KKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA 285 (511)
T ss_dssp HHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEc
Confidence 0 00 1 6677765 2335688899999999999999999999
Q ss_pred cccccccc---------e------eeeeccC------C-chh-hh--hHHHHHhhccCCCC------------------C
Q psy10669 159 SHISGLIA---------G------VKGVTKT------G-EKI-LY--DYEEKINNAVFPSL------------------Q 195 (337)
Q Consensus 159 AH~~Gli~---------g------~~~T~~~------G-g~i-~~--~l~~~i~~~~~p~~------------------~ 195 (337)
||+.|++. | ++++.|| | |++ +. ++.........+++ +
T Consensus 286 a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 365 (511)
T 3vp6_A 286 AWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQ 365 (511)
T ss_dssp TTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSC
T ss_pred cchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCC
Confidence 99998873 1 2333333 2 333 33 23332211111111 1
Q ss_pred CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCcc----------
Q psy10669 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKLT---------- 263 (337)
Q Consensus 196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~~---------- 263 (337)
.+.. ....++..++..+....+++..++..+|+++|++.|.+. |++++.. .....++.+.+.+.+++
T Consensus 366 ~~r~-~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~ 444 (511)
T 3vp6_A 366 CGRH-VDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRRE 444 (511)
T ss_dssp SSCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHH
T ss_pred CCCc-hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHH
Confidence 1111 134555566665555567899999999999999999985 9999862 23455555554443321
Q ss_pred -----hHHHHHHHhhcCceeccCc-------ccchhh
Q psy10669 264 -----GSKVELVLEEIAIACNKNT-------GISLAA 288 (337)
Q Consensus 264 -----~~~~~~~L~~~gI~v~~~~-------girig~ 288 (337)
..++.+.|.+.|+.+-.-. -+||++
T Consensus 445 ~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~ 481 (511)
T 3vp6_A 445 KLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVI 481 (511)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEe
Confidence 2356777777675432211 388865
No 95
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.23 E-value=9.5e-10 Score=107.00 Aligned_cols=254 Identities=13% Similarity=0.104 Sum_probs=149.9
Q ss_pred HHHHHHHHHhhc---ccceeeeccCC------CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 18 LYSLIKKEKHRQ---INGIELIASEN------FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 18 ~~~~~~~e~~rq---~~~i~l~asen------~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
|..+.+.-+... +.-|+|-..+- ..+|.|++++...+......+|+. .....+++ +.++++
T Consensus 39 i~~~~~~~~~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr----~~la~~ 108 (427)
T 3dyd_A 39 IRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAP------SIGFLSSR----EEIASY 108 (427)
T ss_dssp --------CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCC------TTCCHHHH----HHHHHH
T ss_pred HHHHHHHHhhcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCC------CCCcHHHH----HHHHHH
Confidence 666655432222 23366665441 459999999987655421122221 12223444 567788
Q ss_pred cC-----CCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------
Q psy10669 89 FN-----LDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------------- 119 (337)
Q Consensus 89 fg-----~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------------- 119 (337)
++ .+. .+|.+++| +.|+..++.+++++
T Consensus 109 ~~~~~~~~~~----~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 184 (427)
T 3dyd_A 109 YHCPEAPLEA----KDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQL 184 (427)
T ss_dssp HCBTTBCCCG----GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHH
T ss_pred HhhcCCCCCh----HHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 87 443 24666666 88998888988754
Q ss_pred ccc---cccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC-
Q psy10669 120 NNA---RFDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT- 174 (337)
Q Consensus 120 ~~a---~pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~- 174 (337)
+.+ ++++|++. +++ .+...| +++|.++|+++|+++++|++|...... .++++..|
T Consensus 185 ~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~ 264 (427)
T 3dyd_A 185 EYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKR 264 (427)
T ss_dssp HSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTT
T ss_pred HHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeecccc
Confidence 001 25655554 433 357778 888889999999999999999853222 12234322
Q ss_pred ----C---chhhh---------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 175 ----G---EKILY---------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 175 ----G---g~i~~---------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
| |+++. ++.+.+.....+ ..+++++..+++..++.......+++.++++.++.++|.+.|.+
T Consensus 265 ~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~--~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (427)
T 3dyd_A 265 WLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR--ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA 342 (427)
T ss_dssp SSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH--HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc--cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 44442 233333322111 23677888888888776533344578889999999999999998
Q ss_pred C-CCEEecCCCCCeEEEEEecCC----CcchHHHHHHH-hhcCceeccCc------ccchhh
Q psy10669 239 R-GYHVVTGGTDVHLILIDLRKN----KLTGSKVELVL-EEIAIACNKNT------GISLAA 288 (337)
Q Consensus 239 ~-G~~v~~~~t~~h~v~V~~~~~----~~~~~~~~~~L-~~~gI~v~~~~------girig~ 288 (337)
. |+++..+ .....+++.+... +.+..++...| ++.||.+.+.. .+||+.
T Consensus 343 ~~g~~~~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~ 403 (427)
T 3dyd_A 343 IPGLRPVRP-SGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI 403 (427)
T ss_dssp STTEEEECC-SBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES
T ss_pred CCCceecCC-CeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE
Confidence 6 8887642 3445666666522 23455666555 57899998643 477764
No 96
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.23 E-value=3.2e-10 Score=108.16 Aligned_cols=224 Identities=13% Similarity=0.085 Sum_probs=143.2
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~ 111 (337)
.|.+.. ...++.+++++...+.+.+ +. ......+++ +.+++++|.++ .+.+.||+.|+..
T Consensus 10 ~i~~~~--p~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~ 69 (393)
T 1mdo_A 10 FLPFSR--PAMGAEELAAVKTVLDSGW--------IT-TGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHI 69 (393)
T ss_dssp CBCSCC--CCCCHHHHHHHHHHHHHTC--------CS-SSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHH
T ss_pred ccccCC--CCCCHHHHHHHHHHHhcCC--------cC-CChHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHH
Confidence 455543 4578999999987655421 11 123334554 68899999874 4666777999988
Q ss_pred HHHhh-CCc------------------------------------------c--cc-cccEEEEcCcccccccChHHHHH
Q psy10669 112 VCEKA-LPT------------------------------------------N--NA-RFDFLSSGTTCYSRCLDYARFRQ 145 (337)
Q Consensus 112 v~~aL-l~~------------------------------------------~--~a-~pklII~~~S~~~~~~d~~~l~e 145 (337)
++.++ +++ + +. ++++|++.. .++...|+++|.+
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~-~~G~~~~~~~i~~ 148 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVH-YAGAPADLDAIYA 148 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBC-GGGCCCCHHHHHH
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEeC-CCCCcCCHHHHHH
Confidence 88988 654 0 00 267888764 6778889999999
Q ss_pred HhhhcCCeEEEeccccccccc---------eeeeec---c-----CCchhhh---hHHHHHhhccCCC------------
Q psy10669 146 ICDETDSIMFADMSHISGLIA---------GVKGVT---K-----TGEKILY---DYEEKINNAVFPS------------ 193 (337)
Q Consensus 146 ia~~~ga~l~vD~AH~~Gli~---------g~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~------------ 193 (337)
+|+++|+++++|++|+.|+.. .+++++ | .||+++. ++.+.+.+....+
T Consensus 149 l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 228 (393)
T 1mdo_A 149 LGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGG 228 (393)
T ss_dssp HHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC--------
T ss_pred HHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhccc
Confidence 999999999999999987532 122332 2 3566654 3555544321111
Q ss_pred ---C-----CCC-C-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-----CCCeEEEEEec
Q psy10669 194 ---L-----QGG-P-HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-----TDVHLILIDLR 258 (337)
Q Consensus 194 ---~-----~g~-~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-----t~~h~v~V~~~ 258 (337)
. .|+ . ..+..++++.. .+ ...++..++..+++++|.+.|.+.++++.... +..+++++.+.
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~a~~~~--~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~ 304 (393)
T 1mdo_A 229 RAPQAEVLAPGYKYNLPDLNAAIALA--QL--QKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVD 304 (393)
T ss_dssp ---CCEESSCCCBCCCCHHHHHHHHH--HH--HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECC
T ss_pred ccccccccccCccCCCCHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEec
Confidence 1 111 1 12222222222 22 23456777888899999999999888775311 34567888775
Q ss_pred CC--CcchHHHHHHHhhcCceecc
Q psy10669 259 KN--KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 259 ~~--~~~~~~~~~~L~~~gI~v~~ 280 (337)
.. +.+..++.+.|.+.||.+..
T Consensus 305 ~~~~~~~~~~l~~~l~~~gi~v~~ 328 (393)
T 1mdo_A 305 EARCGITRDALMASLKTKGIGTGL 328 (393)
T ss_dssp HHHHSSCHHHHHHHHHHTTBCCBC
T ss_pred ccccccCHHHHHHHHHhCCCCccc
Confidence 31 44678888999989998875
No 97
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.23 E-value=6.3e-10 Score=106.22 Aligned_cols=220 Identities=12% Similarity=0.037 Sum_probs=140.5
Q ss_pred CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CC
Q psy10669 40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LP 118 (337)
Q Consensus 40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~ 118 (337)
-.++|.+++++...+.. |.. . |.......+++ +++++++|.++ +|.++||+.|+..++.++ ++
T Consensus 13 p~~~~~~~~a~~~~l~~----~~~--~-~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~ 76 (388)
T 1b9h_A 13 PQYDDAERNGLVRALEQ----GQW--W-RMGGDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVG 76 (388)
T ss_dssp SCCCHHHHHHHHHHHHT----SCC--B-TTTCSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHc----CCe--e-ecCCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCC
Confidence 34569999999876543 111 1 22223445555 68899999874 689999999998888998 65
Q ss_pred c--------------------------------c--------c--c---cccEEEEcCcccccccChHHHHHHhhhcCCe
Q psy10669 119 T--------------------------------N--------N--A---RFDFLSSGTTCYSRCLDYARFRQICDETDSI 153 (337)
Q Consensus 119 ~--------------------------------~--------~--a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~ 153 (337)
+ . + + ++++|+.. ...+...|+++|.++|+++|++
T Consensus 77 ~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~-n~tG~~~~l~~i~~la~~~~~~ 155 (388)
T 1b9h_A 77 PGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPV-HMAGLMADMDALAKISADTGVP 155 (388)
T ss_dssp TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB-CGGGCCCCHHHHHHHHHHHTCC
T ss_pred CcCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEEe-CCccCcCCHHHHHHHHHHcCCE
Confidence 4 0 0 0 15666632 3457888999999999999999
Q ss_pred EEEeccccccccc--------e--eeeec---c-----CCchhhh--h-H--HHHHhhccC------C-----CCCCC--
Q psy10669 154 MFADMSHISGLIA--------G--VKGVT---K-----TGEKILY--D-Y--EEKINNAVF------P-----SLQGG-- 197 (337)
Q Consensus 154 l~vD~AH~~Gli~--------g--~~~T~---~-----~Gg~i~~--~-l--~~~i~~~~~------p-----~~~g~-- 197 (337)
+++|++|+.|... + .+++. | .||++++ + + .+.+..... | ...|+
T Consensus 156 li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 235 (388)
T 1b9h_A 156 LLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNM 235 (388)
T ss_dssp BCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBC
T ss_pred EEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccC
Confidence 9999999987643 1 12221 2 4677764 2 5 444432110 0 01122
Q ss_pred -CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-----CCCCeEEEEEecCC-CcchHHHHH
Q psy10669 198 -PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-----GTDVHLILIDLRKN-KLTGSKVEL 269 (337)
Q Consensus 198 -~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-----~t~~h~v~V~~~~~-~~~~~~~~~ 269 (337)
++....+++..++ ...++..++..++.++|.+.|.+. |+++... ....+++++.+... +.+..++.+
T Consensus 236 ~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (388)
T 1b9h_A 236 RLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVD 310 (388)
T ss_dssp BCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHH
Confidence 3433333322222 234567788889999999999985 8887642 12357888887642 125667888
Q ss_pred HHhhcCceeccC
Q psy10669 270 VLEEIAIACNKN 281 (337)
Q Consensus 270 ~L~~~gI~v~~~ 281 (337)
.|.+.||.+...
T Consensus 311 ~L~~~gI~v~~~ 322 (388)
T 1b9h_A 311 RLVEAGLPAFAA 322 (388)
T ss_dssp HHHHTTCCEEEC
T ss_pred HHHHCCCCcccc
Confidence 888889988753
No 98
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.23 E-value=8e-10 Score=106.66 Aligned_cols=248 Identities=9% Similarity=-0.001 Sum_probs=150.5
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
..|.|...++.. +|.|.+++...+......+++. .....+++....+.+++.+|.+.... .+|.+++| +.
T Consensus 48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~v~~t~G~~~ 120 (404)
T 2o1b_A 48 PLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGA------FHGKEAFKQAIVDFYQRQYNVTLDKE-DEVCILYGTKN 120 (404)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCCCTT-TSEEEESSHHH
T ss_pred CEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCc-ccEEEcCCcHH
Confidence 357777766653 7999999987653210112221 11124455333344455558751100 14777777 67
Q ss_pred hHHHHHHhhCCc----------------------------------------ccc-----cccEEEEcCccc--ccccC-
Q psy10669 108 ANFAVCEKALPT----------------------------------------NNA-----RFDFLSSGTTCY--SRCLD- 139 (337)
Q Consensus 108 AN~~v~~aLl~~----------------------------------------~~a-----~pklII~~~S~~--~~~~d- 139 (337)
|+..++.+++++ .+. ++++|++..-.+ +...|
T Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 200 (404)
T 2o1b_A 121 GLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATK 200 (404)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCH
Confidence 888888998754 011 167777752233 45554
Q ss_pred --hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC-----C---chhhh--hHHHHHhhccC
Q psy10669 140 --YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT-----G---EKILY--DYEEKINNAVF 191 (337)
Q Consensus 140 --~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~-----G---g~i~~--~l~~~i~~~~~ 191 (337)
+++|.++|+++|+++++|++|..+... .++++..| | |+++. ++.+.+.....
T Consensus 201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~ 280 (404)
T 2o1b_A 201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQT 280 (404)
T ss_dssp HHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHh
Confidence 567888999999999999999864321 12233322 2 55554 46665554322
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L 271 (337)
+ ...+++.+..+++..++... ....++.++++.++.++|.+.|.+.|+++..+ ..+..+++++.. +.+..++.+.|
T Consensus 281 ~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~-~~~~~~l~~~l 356 (404)
T 2o1b_A 281 H-TNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHA-KGGIYVWLETPP-GYDSEQFEQFL 356 (404)
T ss_dssp H-HCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECC-CBSSEEEEECCT-TCCHHHHHHHH
T ss_pred h-ccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCC-CcceEEEEeCCC-CCCHHHHHHHH
Confidence 1 12356677777776666553 23456778889999999999999999988652 224457777753 44667776665
Q ss_pred h-hcCceeccCc--------ccchhhh
Q psy10669 272 E-EIAIACNKNT--------GISLAAE 289 (337)
Q Consensus 272 ~-~~gI~v~~~~--------girig~~ 289 (337)
. +.||.+.+.. .+||+..
T Consensus 357 ~~~~gi~v~~g~~f~~~~~~~iRis~~ 383 (404)
T 2o1b_A 357 VQEKSILVAPGKPFGENGNRYVRISLA 383 (404)
T ss_dssp HHHHCEECEESGGGCGGGTTEEEEECC
T ss_pred HHHCCEEEeCchhhCcCCCCeEEEEEc
Confidence 4 6799987632 4676643
No 99
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.23 E-value=5.4e-10 Score=106.81 Aligned_cols=226 Identities=12% Similarity=0.041 Sum_probs=143.5
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---- 117 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl---- 117 (337)
.+|.|.+++...+. ++..+ . +.+ ......+++ +++++++|.+. .+..+||+.||..++.++.
T Consensus 53 ~~p~v~~a~~~~~~-~~~~~--~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~ 118 (392)
T 3ruy_A 53 RHPKIINALIDQAN-RVTLT--S-RAF-HSDQLGPWY----EKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY 118 (392)
T ss_dssp TCHHHHHHHHHHHT-TCSCC--C-TTS-EETTHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hcccc--c-ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence 48999999987643 33221 1 211 234445565 57788898542 3555666899877776542
Q ss_pred --------Cc-----------------------------------------------c--c-ccccEEEEcCccc--ccc
Q psy10669 118 --------PT-----------------------------------------------N--N-ARFDFLSSGTTCY--SRC 137 (337)
Q Consensus 118 --------~~-----------------------------------------------~--~-a~pklII~~~S~~--~~~ 137 (337)
++ + + .++++|++....+ +..
T Consensus 119 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~ 198 (392)
T 3ruy_A 119 DVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGIN 198 (392)
T ss_dssp HTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSB
T ss_pred hccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCc
Confidence 11 0 0 0267888864333 466
Q ss_pred cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e-----eeeecc-------CCchhhh--hHHHHHhhcc
Q psy10669 138 LD----YARFRQICDETDSIMFADMSHI-SGLIA--------G-----VKGVTK-------TGEKILY--DYEEKINNAV 190 (337)
Q Consensus 138 ~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g-----~~~T~~-------~Gg~i~~--~l~~~i~~~~ 190 (337)
.| +++|.++|+++|++|++|++|+ .|..+ + ++++ | .+|+++. ++.+.+.+..
T Consensus 199 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~S-K~l~gG~~~~G~~~~~~~~~~~~~~~~ 277 (392)
T 3ruy_A 199 IPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILG-KALGGGVFPISCAAANRDILGVFEPGS 277 (392)
T ss_dssp CCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC-GGGGTTTSCCEEEEECHHHHTTCCTTS
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEc-hhhhCChhhhEEEEECHHHHhhhccCC
Confidence 66 9999999999999999999995 33221 1 1111 2 1244444 4555555433
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHH
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
... ..++++...+++..++..+.. ++.++++.++.++|.+.|.+.+..... .....+++.+.+.. ++.++.+
T Consensus 278 ~~~-~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~---~~~~l~~ 350 (392)
T 3ruy_A 278 HGS-TFGGNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGIELNE---PARPYCE 350 (392)
T ss_dssp SCC-SSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEEEESS---CSHHHHH
T ss_pred cCC-CCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEEEEcc---hHHHHHH
Confidence 322 236677788888777776532 577889999999999999987532221 11345667777754 5677888
Q ss_pred HHhhcCceeccCc--ccchhhh
Q psy10669 270 VLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 270 ~L~~~gI~v~~~~--girig~~ 289 (337)
.|.+.||.+.+.. .+||+.+
T Consensus 351 ~l~~~gi~v~~~~~~~iRi~~~ 372 (392)
T 3ruy_A 351 QLKAAGLLCKETHENVIRIAPP 372 (392)
T ss_dssp HHHTTTEECCCBTTTEEEECCC
T ss_pred HHHHCCcEEecCCCCEEEEECC
Confidence 8888999998743 6888744
No 100
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.23 E-value=1.1e-09 Score=104.08 Aligned_cols=239 Identities=9% Similarity=-0.016 Sum_probs=145.2
Q ss_pred cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC
Q psy10669 29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG 105 (337)
Q Consensus 29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg 105 (337)
.+..|.|...++.. +|.|.+++...+.+... ..|.......+++....+.+.+.+|.+ .++ .+|.+++|
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~--~~v~~~~g 95 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYEGRYGVGLDPR--REALALIG 95 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHHHHHSCCCCTT--TSEEEESS
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccEEEcCC
Confidence 34567777776653 89999999876532101 112222233455533333444445875 211 14777777
Q ss_pred -chhHHHHHHhhCCc---------------------------------------ccc-----cccEEEEcCccc--cccc
Q psy10669 106 -SPANFAVCEKALPT---------------------------------------NNA-----RFDFLSSGTTCY--SRCL 138 (337)
Q Consensus 106 -t~AN~~v~~aLl~~---------------------------------------~~a-----~pklII~~~S~~--~~~~ 138 (337)
++|+..++.+++++ .+. ++++|++..-.+ +...
T Consensus 96 ~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 175 (376)
T 2dou_A 96 SQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVA 175 (376)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred cHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccC
Confidence 67888888888753 011 167887762222 4455
Q ss_pred C---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c-------CCchhhh--hHHHHHhhc
Q psy10669 139 D---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K-------TGEKILY--DYEEKINNA 189 (337)
Q Consensus 139 d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~ 189 (337)
| +++|.++|+++|+++++|++|..+... .+.+|. | +.|+++. ++.+.+...
T Consensus 176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~ 255 (376)
T 2dou_A 176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERV 255 (376)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHH
Confidence 5 556778999999999999999864321 012222 2 1266654 466655543
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
..+. ..+++++..+++..++... ....++.++++.++.++|.+.|.+. +++..+ ..+..+++.+.. +.+..++.+
T Consensus 256 ~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~ 330 (376)
T 2dou_A 256 KGVI-DFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV-LSLLPP-RATMYLWGRLPE-GVDDLEFGL 330 (376)
T ss_dssp HHHH-CCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCC-CBSSEEEEECCT-TCCHHHHHH
T ss_pred HHhc-ccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCC-CeeEEEEEECCC-CCCHHHHHH
Confidence 2222 2245666666666666442 2345677888899999999999888 777542 234567787754 446677777
Q ss_pred HHhhcCceecc
Q psy10669 270 VLEEIAIACNK 280 (337)
Q Consensus 270 ~L~~~gI~v~~ 280 (337)
.|.+.||.+.+
T Consensus 331 ~l~~~gi~v~~ 341 (376)
T 2dou_A 331 RLVERGVALAP 341 (376)
T ss_dssp HHHHTTEECEE
T ss_pred HHHHCCEEEcC
Confidence 78777999875
No 101
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.22 E-value=3e-10 Score=109.31 Aligned_cols=219 Identities=14% Similarity=0.097 Sum_probs=135.6
Q ss_pred cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-
Q psy10669 38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA- 116 (337)
Q Consensus 38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL- 116 (337)
++-+++|++++++...+.+.|.. + .| ....+++ +.+++++|.+. .+...||+.|+..++.++
T Consensus 6 ~~p~~~~~v~~a~~~~~~~~~~~--~-----~g-~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~ 68 (394)
T 1o69_A 6 SPPHMGGNELKYIEEVFKSNYIA--P-----LG-EFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAG 68 (394)
T ss_dssp ------CCHHHHHHHHHHHTTTS--C-----TT-HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCCcc--C-----CC-hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcC
Confidence 34467888999988776543311 0 12 2334554 68889999853 355566689998888988
Q ss_pred CCc-----------------------------------------c--c-c---cccEEEEcCcccccccChHHHHHHhhh
Q psy10669 117 LPT-----------------------------------------N--N-A---RFDFLSSGTTCYSRCLDYARFRQICDE 149 (337)
Q Consensus 117 l~~-----------------------------------------~--~-a---~pklII~~~S~~~~~~d~~~l~eia~~ 149 (337)
+++ + + . ++++|++.. .++...|+++|.++|++
T Consensus 69 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l~~i~~l~~~ 147 (394)
T 1o69_A 69 VKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKMDEIVEICKE 147 (394)
T ss_dssp CCTTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCHHHHHHHHHH
T ss_pred CCCCCEEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhHHHHHHHHHH
Confidence 653 0 0 1 367787764 67788999999999999
Q ss_pred cCCeEEEeccccccccc-e----------e-eee-cc-----CCchhhh---hHHHHHhhccCCCC------C-------
Q psy10669 150 TDSIMFADMSHISGLIA-G----------V-KGV-TK-----TGEKILY---DYEEKINNAVFPSL------Q------- 195 (337)
Q Consensus 150 ~ga~l~vD~AH~~Gli~-g----------~-~~T-~~-----~Gg~i~~---~l~~~i~~~~~p~~------~------- 195 (337)
+|+++++|++|..|+.. + + +++ +| .+|+++. ++.+.+.....++. +
T Consensus 148 ~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~ 227 (394)
T 1o69_A 148 NDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYN 227 (394)
T ss_dssp TTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCB
T ss_pred cCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcc
Confidence 99999999999987543 1 1 111 12 3566654 35555543211111 0
Q ss_pred -CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC----CCCeEEEEEecCC----------
Q psy10669 196 -GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG----TDVHLILIDLRKN---------- 260 (337)
Q Consensus 196 -g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~----t~~h~v~V~~~~~---------- 260 (337)
++++....+++. .+ ..+++..+++.++.+++.+.|.+. +++.... +..|++++.+...
T Consensus 228 ~~~~~~~aa~~l~----~l--~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 300 (394)
T 1o69_A 228 YRLSNVLGAIGVA----QM--EVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKD 300 (394)
T ss_dssp CBCCHHHHHHHHH----HH--TTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEE
T ss_pred cCcCHHHHHHHHH----HH--HHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhcccccccc
Confidence 122222222222 21 234567899999999999999887 6665421 1234677777632
Q ss_pred ----------CcchHHHHHHHhhcCceeccC
Q psy10669 261 ----------KLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 261 ----------~~~~~~~~~~L~~~gI~v~~~ 281 (337)
+++..++.+.|.+.||.++..
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~ 331 (394)
T 1o69_A 301 INISQKNITLHPKISKLIEDLKNKQIETRPL 331 (394)
T ss_dssp EECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred ccccccccccccCHHHHHHHHHHcCCccccc
Confidence 346778889998899988753
No 102
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.21 E-value=1.5e-09 Score=103.04 Aligned_cols=239 Identities=12% Similarity=0.052 Sum_probs=155.6
Q ss_pred ceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-c
Q psy10669 32 GIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 32 ~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg-t 106 (337)
.|.|...+|.+ +|.|.+++...+.+ +. ....+ |..... .+++....+.+.+.+| .+. .+|.+++| +
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~-~~--~~~~~-y~~~~~-~~l~~~la~~l~~~~g~~~~~----~~v~~~~G~~ 102 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDK-IA--TELNR-YPERDA-VELRDELAAYITKQTGVAVTR----DNLWAANGSN 102 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHH-HG--GGTTS-CCCTTC-HHHHHHHHHHHHHHHCCCCCG----GGEEEESHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHh-cc--ccccc-CCCccH-HHHHHHHHHhhhhcccCCCCh----HhEEECCChH
Confidence 37777777743 89999999876543 21 11112 211112 3555433334444444 333 35888888 5
Q ss_pred hhHHHHHHhhCCc---------------------------------------cc-----c-cccEEEEcCcc--cccccC
Q psy10669 107 PANFAVCEKALPT---------------------------------------NN-----A-RFDFLSSGTTC--YSRCLD 139 (337)
Q Consensus 107 ~AN~~v~~aLl~~---------------------------------------~~-----a-~pklII~~~S~--~~~~~d 139 (337)
.++..++.+++++ ++ . ++++|++..-. .+...|
T Consensus 103 ~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~ 182 (369)
T 3cq5_A 103 EILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS 182 (369)
T ss_dssp HHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC
Confidence 6777778888654 00 1 36777775322 368889
Q ss_pred hHHHHHHhhhcCCeEEEeccccccccc----------e----eeeeccC-----C---chhhh--hHHHHHhhccCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGLIA----------G----VKGVTKT-----G---EKILY--DYEEKINNAVFPSLQ 195 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gli~----------g----~~~T~~~-----G---g~i~~--~l~~~i~~~~~p~~~ 195 (337)
.+++.+||+.+++++++|++|..+... + +.+|.+| | |+++. ++.+.+.....++
T Consensus 183 ~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-- 260 (369)
T 3cq5_A 183 LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPY-- 260 (369)
T ss_dssp HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTT--
T ss_pred HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCC--
Confidence 999999999999999999999865421 1 1233322 3 55554 5667776554432
Q ss_pred CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
+++++..++...++... ...++.++++.++.++|.+.|.+.|+++.. .+.+.+++.+. .+..++.+.|.+.|
T Consensus 261 -~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~---~~~~~l~~~l~~~g 332 (369)
T 3cq5_A 261 -HLSALSQAAAIVALRHS--ADTLGTVEKLSVERVRVAARLEELGYAVVP--SESNFVFFGDF---SDQHAAWQAFLDRG 332 (369)
T ss_dssp -CSCHHHHHHHHHHHHTH--HHHHTHHHHHHHHHHHHHHHHHHHTCEEEC--CSSSEEEEECC---SSHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECC--CCCeEEEEECC---CCHHHHHHHHHHCC
Confidence 46677777666666542 245678889999999999999988998874 45677788775 36777888888899
Q ss_pred ceeccC---cccchhhh
Q psy10669 276 IACNKN---TGISLAAE 289 (337)
Q Consensus 276 I~v~~~---~girig~~ 289 (337)
|.+.+. ..+||+..
T Consensus 333 i~v~~~~~~~~iRis~~ 349 (369)
T 3cq5_A 333 VLIRDVGIAGHLRTTIG 349 (369)
T ss_dssp EECBCCSCTTEEEEECC
T ss_pred EEEEECCCCCeEEEEeC
Confidence 999764 25777643
No 103
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.21 E-value=4.6e-10 Score=108.64 Aligned_cols=227 Identities=17% Similarity=0.106 Sum_probs=144.2
Q ss_pred ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669 37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK 115 (337)
Q Consensus 37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a 115 (337)
+....++|.+++++...+.+. ..+. .....|... .++++ +.+++++|.++ .+.++||+.|+..++.+
T Consensus 9 p~~~~~~~~~~~a~~~~~~~~-~~~~--~~~~~g~~~l~~~l~----~~la~~~g~~~-----~i~~~~gt~al~~~~~~ 76 (418)
T 2c81_A 9 PEWPQHSDRTRRKIEEVFQSN-RWAI--SGYWTGEESMERKFA----KAFADFNGVPY-----CVPTTSGSTALMLALEA 76 (418)
T ss_dssp CCSSCCCHHHHHHHHHHHHHT-CCST--TSBCCSSCCHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhcC-Cccc--cCcccCCHHHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHH
Confidence 445567899999998775542 1121 112334433 45565 57889999874 68888999999888899
Q ss_pred h-CCc------------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhh
Q psy10669 116 A-LPT------------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDE 149 (337)
Q Consensus 116 L-l~~------------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~ 149 (337)
+ +++ +.+ ++++|++.. ..+...|+++|.++|++
T Consensus 77 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~-~~G~~~~~~~i~~~~~~ 155 (418)
T 2c81_A 77 LGIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPVH-LFGSMANMDEINEIAQE 155 (418)
T ss_dssp TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCBC-CTTCCCCHHHHHHHHHH
T ss_pred cCCCCcCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEeC-CcCCcccHHHHHHHHHH
Confidence 8 653 111 257777753 56788999999999999
Q ss_pred cCCeEEEeccccccc-cc---------eeeee---cc-----CCchhhh---hHHHHHhhccCCCC--------------
Q psy10669 150 TDSIMFADMSHISGL-IA---------GVKGV---TK-----TGEKILY---DYEEKINNAVFPSL-------------- 194 (337)
Q Consensus 150 ~ga~l~vD~AH~~Gl-i~---------g~~~T---~~-----~Gg~i~~---~l~~~i~~~~~p~~-------------- 194 (337)
+|+++++|++|..|. +. ..+.+ +| .||+++. ++.+.+.....++.
T Consensus 156 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (418)
T 2c81_A 156 HNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDM 235 (418)
T ss_dssp TTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCB
T ss_pred CCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccccccchh
Confidence 999999999999886 32 11222 22 3566664 35554443211111
Q ss_pred --------CCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC-C--C-C-eEEEEEec
Q psy10669 195 --------QGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGG-T--D-V-HLILIDLR 258 (337)
Q Consensus 195 --------~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~-t--~-~-h~v~V~~~ 258 (337)
.|- ...+..+++.. ..+ ...+++.++..+++++|.+.|.+. |+++.... . . . |++++.+.
T Consensus 236 ~~~~~~~~~g~~~~~~~~~aa~~~--~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 311 (418)
T 2c81_A 236 QLVKKGDIQGSNYCLSEFQSAILL--DQL--QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFD 311 (418)
T ss_dssp SEEECCSSCCCBCCCCHHHHHHHH--HHH--TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEEC
T ss_pred hccccccccCcCCCcCHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEc
Confidence 000 01122222221 122 245678888889999999999885 88886321 1 1 2 56667776
Q ss_pred C---CCcchHHHHHHHhhc-Cce---ecc
Q psy10669 259 K---NKLTGSKVELVLEEI-AIA---CNK 280 (337)
Q Consensus 259 ~---~~~~~~~~~~~L~~~-gI~---v~~ 280 (337)
. .+.+..++.+.|.+. ||. +..
T Consensus 312 ~~~~~~~~~~~l~~~L~~~~gI~~~~v~~ 340 (418)
T 2c81_A 312 PVKFGGLNADQFCEILREKLNMGTFYLHP 340 (418)
T ss_dssp GGGTTTCCHHHHHHHHHHHHTCCTTTEEC
T ss_pred cccccccCHHHHHHHHHHcCCCCcccccc
Confidence 4 255788888999887 999 664
No 104
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.20 E-value=2.1e-09 Score=103.70 Aligned_cols=235 Identities=10% Similarity=-0.018 Sum_probs=142.7
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
+..|.|...++- .+|.|.+++ ..+.+ ...+ |.......+++....+.+.+.+|.+... .++.+++| +
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~-~~~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~t 112 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKP-EVVY------YSHSAGIWELREAFASYYKRRQRVDVKP--ENVLVTNGGS 112 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCC-SSCC------CCCTTCCHHHHHHHHHHHHHTSCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhc-CCCC------CCCCCCcHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCHH
Confidence 445677666654 378999999 76532 1112 2222223456543334444445532110 24556555 8
Q ss_pred hhHHHHHHhhCCc-------------------------------c------cc--------cccEEEEc-Ccc-ccccc-
Q psy10669 107 PANFAVCEKALPT-------------------------------N------NA--------RFDFLSSG-TTC-YSRCL- 138 (337)
Q Consensus 107 ~AN~~v~~aLl~~-------------------------------~------~a--------~pklII~~-~S~-~~~~~- 138 (337)
.|+..++.+++++ . .. ++++|++. .++ .+...
T Consensus 113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~ 192 (409)
T 2gb3_A 113 EAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYG 192 (409)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcC
Confidence 8998888988654 1 11 15666665 222 23443
Q ss_pred --ChHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c----CC---chhhh---hHHHHHhhccC
Q psy10669 139 --DYARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKILY---DYEEKINNAVF 191 (337)
Q Consensus 139 --d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~~---~l~~~i~~~~~ 191 (337)
++++|.++|+++|++|++|++|+.+... .++++. | .| |+++. ++.+.+.....
T Consensus 193 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~ 272 (409)
T 2gb3_A 193 KDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQ 272 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHh
Confidence 5778889999999999999999865431 122332 2 12 55554 46665554433
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE-ecCCCCCeEEEEEecCCCcchHHHHHH
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV-VTGGTDVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v-~~~~t~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
+.. +++++..+++..++... ....++.++++.++.++|.+.|.+.|+++ .. ...+..+++++. +.+..++.+.
T Consensus 273 ~~~--~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~--~~~~~~l~~~ 346 (409)
T 2gb3_A 273 GRL--APPLLEQIGSVGLLNLD-DSFFDFVRETYRERVETVLKKLEEHGLKRFTK-PSGAFYITAELP--VEDAEEFARW 346 (409)
T ss_dssp HSC--CCCHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCC-CSBSSEEEEECS--SSCHHHHHHH
T ss_pred ccC--CCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeC-CCeeEEEEEEeC--CCCHHHHHHH
Confidence 332 56667777666666332 23456778899999999999999989887 53 233556667775 4467778777
Q ss_pred Hhhc------Cceecc
Q psy10669 271 LEEI------AIACNK 280 (337)
Q Consensus 271 L~~~------gI~v~~ 280 (337)
|.+. ||.+.+
T Consensus 347 l~~~~~~~~~gi~v~~ 362 (409)
T 2gb3_A 347 MLTDFNMDGETTMVAP 362 (409)
T ss_dssp HHHSCCBTTEEEECEE
T ss_pred HHhccccccCcEEEeC
Confidence 7754 999875
No 105
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.20 E-value=1e-09 Score=104.61 Aligned_cols=256 Identities=11% Similarity=0.075 Sum_probs=151.6
Q ss_pred hhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669 12 AQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF 89 (337)
Q Consensus 12 ~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf 89 (337)
....+.++..+.+-.. +...|.|...++- .+|.|.+++...+.+. ..+++ ...-..+++....+.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~------~~~g~~~l~~~la~~l~~~~ 84 (386)
T 1u08_A 13 PQLGTTIFTQMSALAQ-QHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYA------PMTGVQALREAIAQKTERLY 84 (386)
T ss_dssp CCCCCCHHHHHHHHHH-HTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCC------CTTCCHHHHHHHHHHHHHHH
T ss_pred hcCCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCC------CCCCCHHHHHHHHHHHHHHh
Confidence 3334444444433222 2346777665543 4799999998765431 11221 11113455544445556667
Q ss_pred CCC-CCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------c---------c--c---
Q psy10669 90 NLD-PEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------N---------N--A--- 122 (337)
Q Consensus 90 g~~-~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------~---------~--a--- 122 (337)
|.+ .+++ +|.+++| ++|+..++.+++++ . + +
T Consensus 85 g~~~~~~~--~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 162 (386)
T 1u08_A 85 GYQPDADS--DITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSE 162 (386)
T ss_dssp SCCCCTTT--TEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCT
T ss_pred CCCCCCCC--CEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcc
Confidence 753 2211 4666666 78888888888654 0 0 0
Q ss_pred cccEEEEcCcc--cccccC---hHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC
Q psy10669 123 RFDFLSSGTTC--YSRCLD---YARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG 175 (337)
Q Consensus 123 ~pklII~~~S~--~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G 175 (337)
++++|++..-. .+...| +++|.++|+++|+++++|++|...... .++++. | .|
T Consensus 163 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 242 (386)
T 1u08_A 163 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG 242 (386)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG
T ss_pred cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcc
Confidence 25777775222 245554 577889999999999999999863221 112232 2 12
Q ss_pred ---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669 176 ---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV 250 (337)
Q Consensus 176 ---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~ 250 (337)
|+++. ++.+.+....... ..+++.+..+++..++... ....++.++++.++.++|.+.|.+.|+++... ..+
T Consensus 243 ~r~G~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g 319 (386)
T 1u08_A 243 WKVGYCVAPAPISAEIRKVHQYL-TFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRLEILPC-EGT 319 (386)
T ss_dssp GCCEEEECCHHHHHHHHHHHHHH-TSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSCEECCC-CBS
T ss_pred cceEEEEcCHHHHHHHHHHHHhh-ccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Cce
Confidence 55554 4655555432111 1244556666666666654 33456788899999999999999889988642 335
Q ss_pred eEEEEEecCCC-cchHHHHHHHh-hcCceecc
Q psy10669 251 HLILIDLRKNK-LTGSKVELVLE-EIAIACNK 280 (337)
Q Consensus 251 h~v~V~~~~~~-~~~~~~~~~L~-~~gI~v~~ 280 (337)
..+++++...+ .+..++.+.|. +.||.+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 351 (386)
T 1u08_A 320 YFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIP 351 (386)
T ss_dssp SEEEEECTTTCCSCHHHHHHHHHHHSCEECEE
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHhCCEEEeC
Confidence 67788886531 35677777664 68999874
No 106
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.20 E-value=2.8e-10 Score=110.74 Aligned_cols=245 Identities=10% Similarity=0.039 Sum_probs=139.4
Q ss_pred ceeeeccCCCC-CHHHHHHHhhhhhhcc--CCCCCCCcC---cCccchHHHHHHHHHHHHHhhcC--------CCCCCCc
Q psy10669 32 GIELIASENFT-SLAVLECLGSCLQNKY--SEGLPGKRY---YGGNQFIDEIEIVAQQRSLKAFN--------LDPEQWG 97 (337)
Q Consensus 32 ~i~l~asen~~-~p~V~~a~~~~l~~~y--~~g~~g~r~---~~G~~~~~~lE~~~~~~~a~lfg--------~~~~~~~ 97 (337)
-|+|-.++|.. .+.+.+++........ ..|..+.|. |....-..+++ +.++++++ ++.
T Consensus 40 ~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~----~~la~~~~~~~~~~~~~~~---- 111 (435)
T 3piu_A 40 IIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFK----KAMVDFMAEIRGNKVTFDP---- 111 (435)
T ss_dssp BEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHH----HHHHHHHHHHTTTSSCCCG----
T ss_pred eEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHH----HHHHHHHHHhhCCCCCCCH----
Confidence 67888888877 5556666544221110 012222222 22222234555 35555555 333
Q ss_pred ceeecCCC-chhHHHHHHhhCCc--------------------------------------------cc---------cc
Q psy10669 98 CNVQPYSG-SPANFAVCEKALPT--------------------------------------------NN---------AR 123 (337)
Q Consensus 98 ~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------~~---------a~ 123 (337)
.++.+++| ++||..++.+++++ +. .+
T Consensus 112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 191 (435)
T 3piu_A 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR 191 (435)
T ss_dssp GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 24666555 78999999999754 00 02
Q ss_pred ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccce--------------------------eeeec
Q psy10669 124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIAG--------------------------VKGVT 172 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g--------------------------~~~T~ 172 (337)
+++|++. +++ .+...+ +++|.++|+++|++|++|++|..+..++ +++|.
T Consensus 192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~ 271 (435)
T 3piu_A 192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL 271 (435)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence 4666554 322 234444 4667788999999999999998754431 13343
Q ss_pred cC-----C---chhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 173 KT-----G---EKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 173 ~~-----G---g~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.| | |+++. ++.+.++....+ ++.+++..++++..+... .....++.++++.++.++|.+.|.+.
T Consensus 272 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 272 SKDLGLPGFRVGAIYSNDDMVVAAATKMSSF---GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp SSSSCCGGGCEEEEEESCHHHHHHHHHHGGG---SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ecccCCCceeEEEEEeCCHHHHHHHHHHhhc---CCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 2 55554 355555543222 233444444444444321 12233677888999999999999999
Q ss_pred CCEEecCCCCCeEEEEEecCCCc-----chHHHHHHH-hhcCceeccCc--------ccchhh
Q psy10669 240 GYHVVTGGTDVHLILIDLRKNKL-----TGSKVELVL-EEIAIACNKNT--------GISLAA 288 (337)
Q Consensus 240 G~~v~~~~t~~h~v~V~~~~~~~-----~~~~~~~~L-~~~gI~v~~~~--------girig~ 288 (337)
|+++..+ ..+.++++++..... +..++.+.| +++||.+.+-. .+||+.
T Consensus 349 g~~~~~~-~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~ 410 (435)
T 3piu_A 349 GISCLNG-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCF 410 (435)
T ss_dssp TCEECCC-CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEEC
T ss_pred CCcccCC-CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEe
Confidence 9988752 334678888865210 234455555 45699988632 477764
No 107
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.20 E-value=1.2e-10 Score=112.13 Aligned_cols=225 Identities=14% Similarity=0.108 Sum_probs=143.6
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN 109 (337)
...|.+.+.++..+|.|++++...+.+. +|..+ ....+++ +.+++++|.++ .+.++||+.|+
T Consensus 30 ~~~id~~~~~~~~~~~v~~a~~~~~~~~--------~y~~~-~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~ 91 (399)
T 2oga_A 30 VPFLDLKAAYEELRAETDAAIARVLDSG--------RYLLG-PELEGFE----AEFAAYCETDH-----AVGVNSGMDAL 91 (399)
T ss_dssp BCSCCHHHHHHHTHHHHHHHHHHHHHHT--------CCSSS-HHHHHHH----HHHHHHTTSSE-----EEEESCHHHHH
T ss_pred CcccccCcCCCCCCHHHHHHHHHHHhcC--------CCCCc-hhHHHHH----HHHHHHHCCCe-----EEEecCHHHHH
Confidence 3557777777777899999998765431 22222 3334554 68899999874 57888899999
Q ss_pred HHHHHhh-CCc-------------------------------c---------c----c-cccEEEEcCcccccccChHHH
Q psy10669 110 FAVCEKA-LPT-------------------------------N---------N----A-RFDFLSSGTTCYSRCLDYARF 143 (337)
Q Consensus 110 ~~v~~aL-l~~-------------------------------~---------~----a-~pklII~~~S~~~~~~d~~~l 143 (337)
..++.++ +++ . + . ++++|++. ...+...|+++|
T Consensus 92 ~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~-n~tG~~~~l~~i 170 (399)
T 2oga_A 92 QLALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALLPV-HLYGHPADMDAL 170 (399)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEECCB-CGGGCCCCHHHH
T ss_pred HHHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEEEe-CCcCCccCHHHH
Confidence 8888998 654 0 0 0 25777764 456788899999
Q ss_pred HHHhhhcCCeEEEeccccccccc----------eeeeec---c------CCchhhh---hHHHHHhhccCCC--------
Q psy10669 144 RQICDETDSIMFADMSHISGLIA----------GVKGVT---K------TGEKILY---DYEEKINNAVFPS-------- 193 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~----------g~~~T~---~------~Gg~i~~---~l~~~i~~~~~p~-------- 193 (337)
.++|+++|+++++|++|..|... .+++++ | .||++++ ++.+.+.....++
T Consensus 171 ~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 250 (399)
T 2oga_A 171 RELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQKYSHE 250 (399)
T ss_dssp HHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSSTTCCC
T ss_pred HHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCcccccccc
Confidence 99999999999999999988532 123332 2 3566654 4555554322221
Q ss_pred ---CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCC-CeEE-EEEecCCCcchHHH
Q psy10669 194 ---LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTD-VHLI-LIDLRKNKLTGSKV 267 (337)
Q Consensus 194 ---~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~-~h~v-~V~~~~~~~~~~~~ 267 (337)
...++++...+++..++.. ++++.++..++++++.+.|.+. |+++...... +++. .+.+.. .+..++
T Consensus 251 ~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~l 323 (399)
T 2oga_A 251 TKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT--ERRDEL 323 (399)
T ss_dssp SCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC--SSHHHH
T ss_pred ccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC--CCHHHH
Confidence 1123344444444444433 3456777888899999999884 8876532122 2221 122221 257788
Q ss_pred HHHHhhcCceecc
Q psy10669 268 ELVLEEIAIACNK 280 (337)
Q Consensus 268 ~~~L~~~gI~v~~ 280 (337)
.+.|.+.||.+..
T Consensus 324 ~~~L~~~gI~v~~ 336 (399)
T 2oga_A 324 RSHLDARGIDTLT 336 (399)
T ss_dssp HHHHHHTTBCCBC
T ss_pred HHHHHHCCCceec
Confidence 8889889999875
No 108
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.20 E-value=1.5e-10 Score=111.52 Aligned_cols=214 Identities=11% Similarity=0.055 Sum_probs=134.7
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH-HhhcC-CCCCCCcceeecCCCchhHHHHHHhh-CCc
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS-LKAFN-LDPEQWGCNVQPYSGSPANFAVCEKA-LPT 119 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~-a~lfg-~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~ 119 (337)
+|.+++++...+.+.+ ++.....+.++| +++ ++++| .++ .+.++||+.|+..++.++ +++
T Consensus 15 ~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~----~~~~a~~~g~~~~-----~v~~~sgt~al~~al~~l~~~~ 77 (377)
T 3ju7_A 15 VIEYLDELKEIDASHI--------YTNYGPINQRFE----QTIMSGFFQNRGA-----VTTVANATLGLMAAIQLKKRKK 77 (377)
T ss_dssp GGGGHHHHHHHHHHTC--------CSSSCHHHHHHH----HHHHHHTSTTCSE-----EEEESCHHHHHHHHHHHHSCTT
T ss_pred cHHHHHHHHHHHHcCC--------cccCCHHHHHHH----HHHHHHHhCCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 5677888877655421 111123456776 577 99999 553 688889999988888887 553
Q ss_pred -------------------------------------------c-c--cc--ccEEEEcCcccccccChHHHHHHhhhcC
Q psy10669 120 -------------------------------------------N-N--AR--FDFLSSGTTCYSRCLDYARFRQICDETD 151 (337)
Q Consensus 120 -------------------------------------------~-~--a~--pklII~~~S~~~~~~d~~~l~eia~~~g 151 (337)
+ + .+ +|+|+.. ..++...|+++|.++|+ +|
T Consensus 78 Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~-~~~G~~~~~~~i~~la~-~~ 155 (377)
T 3ju7_A 78 GKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY-ATFGSWMNLEEYEELEK-KG 155 (377)
T ss_dssp CCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB-CGGGBCCCCHHHHHHHH-TT
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE-CCCCCccCHHHHHHHHh-cC
Confidence 1 1 13 5677754 35789999999999999 99
Q ss_pred CeEEEeccccccccc------------eeeee--cc-----CCchhhh---hHHHHHhhccCCCC----------CCCCc
Q psy10669 152 SIMFADMSHISGLIA------------GVKGV--TK-----TGEKILY---DYEEKINNAVFPSL----------QGGPH 199 (337)
Q Consensus 152 a~l~vD~AH~~Gli~------------g~~~T--~~-----~Gg~i~~---~l~~~i~~~~~p~~----------~g~~~ 199 (337)
+++++|++|..|... .+.|. +| .||++++ ++.++++.....+. .+...
T Consensus 156 ~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~ 235 (377)
T 3ju7_A 156 VPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKM 235 (377)
T ss_dssp CCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCC
T ss_pred CEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCC
Confidence 999999999987532 12221 12 3677765 46665554322221 01111
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC---CEEec--CCCCCeE-EEEEecCCCcchHHHHHHHhh
Q psy10669 200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---YHVVT--GGTDVHL-ILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G---~~v~~--~~t~~h~-v~V~~~~~~~~~~~~~~~L~~ 273 (337)
.+..|+++.+ .+ ...+++.++..+|++++.+.|.+.+ ..+.. +....|. +++.+.. +.+..++.+.|.+
T Consensus 236 ~~~~aa~~~~--~l--~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~ 310 (377)
T 3ju7_A 236 SEYAAAIGIA--TM--KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE-EVRNKQVIEDLKK 310 (377)
T ss_dssp CHHHHHHHHH--HH--HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT-TSCHHHHHHHHHT
T ss_pred CHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCC-hhhHHHHHHHHHH
Confidence 2223333222 22 3456788899999999999999865 22222 1233444 3454433 3357889999999
Q ss_pred cCceecc
Q psy10669 274 IAIACNK 280 (337)
Q Consensus 274 ~gI~v~~ 280 (337)
.||.++.
T Consensus 311 ~gI~~~~ 317 (377)
T 3ju7_A 311 QKIEARL 317 (377)
T ss_dssp TTBCCBC
T ss_pred CCCceec
Confidence 9998875
No 109
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.20 E-value=3e-10 Score=106.51 Aligned_cols=232 Identities=17% Similarity=0.197 Sum_probs=134.3
Q ss_pred eeeeccCCCC-CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669 33 IELIASENFT-SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111 (337)
Q Consensus 33 i~l~asen~~-~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~ 111 (337)
|.+-.++|.. +|.+++++..... +...|.......+++ +++++++|.++ .+.++||+.||..
T Consensus 6 i~~~~~~~~~p~~~~~~a~~~~~~--------~~~~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~ 68 (347)
T 1jg8_A 6 IDLRSDTVTKPTEEMRKAMAQAEV--------GDDVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQV 68 (347)
T ss_dssp EECSCGGGCCCCHHHHHHHHTCCC--------CCGGGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHH
T ss_pred EEeccccCCCCCHHHHHHHhcCCC--------CCcccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHHHH
Confidence 3444555544 7889888864311 111233333445565 68889999874 5777888999988
Q ss_pred HHHhhCCc---------------------------------------------ccc-------cccEEEEcCcc--c-cc
Q psy10669 112 VCEKALPT---------------------------------------------NNA-------RFDFLSSGTTC--Y-SR 136 (337)
Q Consensus 112 v~~aLl~~---------------------------------------------~~a-------~pklII~~~S~--~-~~ 136 (337)
++.+++++ .+. ++++|++.... . +.
T Consensus 69 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~ 148 (347)
T 1jg8_A 69 SIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR 148 (347)
T ss_dssp HHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB
T ss_pred HHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEecCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCc
Confidence 88888654 001 24677765323 2 55
Q ss_pred ccCh---HHHHHHhhhcCCeEEEecccccccc---c-----------eeeeecc------CCchhhh--hHHHHHhhccC
Q psy10669 137 CLDY---ARFRQICDETDSIMFADMSHISGLI---A-----------GVKGVTK------TGEKILY--DYEEKINNAVF 191 (337)
Q Consensus 137 ~~d~---~~l~eia~~~ga~l~vD~AH~~Gli---~-----------g~~~T~~------~Gg~i~~--~l~~~i~~~~~ 191 (337)
..|. ++|.++|+++|+++++|+||..|.+ + .+.++.+ .|++++. ++.+++.....
T Consensus 149 ~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~ 228 (347)
T 1jg8_A 149 VVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARK 228 (347)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCHHHHHHHHHHHH
Confidence 5544 5677899999999999999854321 1 1222332 3545543 35444332100
Q ss_pred CCCCCCCcHH-HHHHH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669 192 PSLQGGPHNH-AIGAI-ATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 192 p~~~g~~~~~-~iaal-a~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
...++.... ..+++ ..++... .+..++..++.+++.+.|.+.|+++......++++++.+...+.+..++.+
T Consensus 229 -~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (347)
T 1jg8_A 229 -MLGGGMRQAGVLAAAGIIALTKM-----VDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIE 302 (347)
T ss_dssp -HHTCCCSSTHHHHHHHHHHHHHS-----STTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHH
T ss_pred -HcCCchhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCceeccCCCcceEEEEEcccccCCHHHHHH
Confidence 011122211 12222 2233332 122345567889999999887887632224567788887643557788888
Q ss_pred HHhhcCceeccCc--ccchh
Q psy10669 270 VLEEIAIACNKNT--GISLA 287 (337)
Q Consensus 270 ~L~~~gI~v~~~~--girig 287 (337)
.|.+.||.+.... .+||.
T Consensus 303 ~l~~~gi~v~~~~~~~iRl~ 322 (347)
T 1jg8_A 303 ALRNSGVLANAVSDTEIRLV 322 (347)
T ss_dssp HHHHHTEECEEEETTEEEEE
T ss_pred HHHHCCCEEecCCCCeEEEE
Confidence 8888899987532 47775
No 110
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.19 E-value=2.2e-09 Score=105.36 Aligned_cols=254 Identities=11% Similarity=0.002 Sum_probs=157.5
Q ss_pred HHHHHHHHHHHhhccc-ce---eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669 16 PELYSLIKKEKHRQIN-GI---ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL 91 (337)
Q Consensus 16 ~~~~~~~~~e~~rq~~-~i---~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~ 91 (337)
.++++.+.+....... .. ..++ .+.+|.+.+++...+.. ...+ +.......++|..+++.+++++|.
T Consensus 26 ~~v~~~~~~~~~~~~~~~~~~~~f~~--~~~~~~v~e~~~~a~~~-~~~~------~~~~~~~~~l~~~~~~~la~l~g~ 96 (452)
T 2dgk_A 26 DVAFQIINDELYLDGNARQNLATFCQ--TWDDENVHKLMDLSINK-NWID------KEEYPQSAAIDLRCVNMVADLWHA 96 (452)
T ss_dssp HHHHHHHHHHGGGSCCCTTBCSCCSC--CCCCHHHHHHHHHTTTC-BTTC------TTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCCCccCCCCeeC--CCchHHHHHHHHHHhcc-CCCC------hhhChhHHHHHHHHHHHHHHHhCC
Confidence 4677777765533222 11 1222 46789999998765432 1111 112234568888888999999999
Q ss_pred CCCC--CcceeecCC-CchhHHHHHHhhC---------------Cc----------------------------c-----
Q psy10669 92 DPEQ--WGCNVQPYS-GSPANFAVCEKAL---------------PT----------------------------N----- 120 (337)
Q Consensus 92 ~~~~--~~~~v~~~S-gt~AN~~v~~aLl---------------~~----------------------------~----- 120 (337)
+... + ..+.+++ ||.||+.++.++. ++ .
T Consensus 97 ~~~~~~~-~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~~h~~~~~~~~~~G~~v~~v~~~~~~~~~ 175 (452)
T 2dgk_A 97 PAPKNGQ-AVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFM 175 (452)
T ss_dssp CCCTTSC-CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSC
T ss_pred CcccccC-CceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECCCcHHHHHHHHHcCceEEEEecCCCCCeE
Confidence 8642 1 1244544 4889877766552 11 0
Q ss_pred ----c--c---cccEEEEcCcc--cccccChHHHHHHhhhc------CCeEEEeccccccccc-------------e---
Q psy10669 121 ----N--A---RFDFLSSGTTC--YSRCLDYARFRQICDET------DSIMFADMSHISGLIA-------------G--- 167 (337)
Q Consensus 121 ----~--a---~pklII~~~S~--~~~~~d~~~l~eia~~~------ga~l~vD~AH~~Gli~-------------g--- 167 (337)
+ + +|++|++...+ .+...|+++|.++|+++ |++++||+||..++.. +
T Consensus 176 d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~ 255 (452)
T 2dgk_A 176 DPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKS 255 (452)
T ss_dssp CHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEE
T ss_pred CHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcE
Confidence 0 0 26777776433 46888999999999996 9999999999887531 1
Q ss_pred eeeeccC-------Cchhhh-h--H-HHHHhh-ccCC-------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Q psy10669 168 VKGVTKT-------GEKILY-D--Y-EEKINN-AVFP-------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN 228 (337)
Q Consensus 168 ~~~T~~~-------Gg~i~~-~--l-~~~i~~-~~~p-------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n 228 (337)
++++.|| .|+++. + + .+.+.. .-+. .+.++......+++..++..+....+++..++..++
T Consensus 256 ~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~ 335 (452)
T 2dgk_A 256 ISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQV 335 (452)
T ss_dssp EEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2233232 244443 2 2 122211 1111 123444444556666666655445678889999999
Q ss_pred HHHHHHHHHhC-CCEEecCC---CCCeEEEEEecCC---CcchHHHHHHHhhcCceec
Q psy10669 229 ASHLSDEMIKR-GYHVVTGG---TDVHLILIDLRKN---KLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 229 a~~l~~~L~~~-G~~v~~~~---t~~h~v~V~~~~~---~~~~~~~~~~L~~~gI~v~ 279 (337)
+++|.+.|.+. |++++..+ ...+++.+.+... +++..++.+.|.+.||.+.
T Consensus 336 a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~ 393 (452)
T 2dgk_A 336 AAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVP 393 (452)
T ss_dssp HHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCC
T ss_pred HHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeee
Confidence 99999999996 59987532 3556777766542 2455788899988899654
No 111
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.19 E-value=7.3e-10 Score=106.86 Aligned_cols=264 Identities=11% Similarity=0.076 Sum_probs=156.2
Q ss_pred hhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhcc-CCCCCCCcCcCccchHHHHHHHHHH
Q psy10669 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKY-SEGLPGKRYYGGNQFIDEIEIVAQQ 83 (337)
Q Consensus 7 ~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y-~~g~~g~r~~~G~~~~~~lE~~~~~ 83 (337)
+.+.+...++..+.-+.+. ..+...|+|-..++- .+|.|.+++...+.... ..+++.. .| ..++.....+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~---~g---~~~lr~~la~ 78 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT---FG---YPPLTKILAS 78 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHH-HHTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT---TC---CHHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHH-hhcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC---CC---CHHHHHHHHH
Confidence 3455666666544333322 223466777776665 48999999987654321 1122211 12 2344433334
Q ss_pred HHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------c-----------
Q psy10669 84 RSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------N----------- 120 (337)
Q Consensus 84 ~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------~----------- 120 (337)
.+.+.+|.+-.. ..+|.+++| +.|+..++.+++++ .
T Consensus 79 ~~~~~~g~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~ 157 (422)
T 3fvs_A 79 FFGELLGQEIDP-LRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSS 157 (422)
T ss_dssp HHHHHHTCCCCH-HHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBG
T ss_pred HHHHhhCCCCCC-CCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccc
Confidence 556666654210 014666666 78888888888654 1
Q ss_pred ----cc----------cccEEEEcCcc--ccccc---ChHHHHHHhhhcCCeEEEeccccccccc---------------
Q psy10669 121 ----NA----------RFDFLSSGTTC--YSRCL---DYARFRQICDETDSIMFADMSHISGLIA--------------- 166 (337)
Q Consensus 121 ----~a----------~pklII~~~S~--~~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------- 166 (337)
.- ++++|++..-. .+... ++++|.++|+++|+++++|++|......
T Consensus 158 ~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 237 (422)
T 3fvs_A 158 SNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE 237 (422)
T ss_dssp GGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred cCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccC
Confidence 00 14666665223 24555 5778889999999999999999753322
Q ss_pred --eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH------hchhhHHHHHHHHHH
Q psy10669 167 --GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA------QSDEFKSYQAQVKAN 228 (337)
Q Consensus 167 --g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~------~~~~~~~y~~~v~~n 228 (337)
.+.++. | .| |+++. ++.+.+..... ....+++++..+++..++... .....++.++++.++
T Consensus 238 ~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 316 (422)
T 3fvs_A 238 RTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQ-NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC 316 (422)
T ss_dssp GEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHH
T ss_pred cEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHh-hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHH
Confidence 112222 2 12 55554 46565554322 223356677777777777641 123457888999999
Q ss_pred HHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCc--c----------hHHHHH-HHhhcCceecc
Q psy10669 229 ASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKL--T----------GSKVEL-VLEEIAIACNK 280 (337)
Q Consensus 229 a~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~--~----------~~~~~~-~L~~~gI~v~~ 280 (337)
.++|.+.|.+.|+++... ..+..+++++...+. . ..++.. .|+++||.+.+
T Consensus 317 ~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 380 (422)
T 3fvs_A 317 RDHMIRSLQSVGLKPIIP-QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIP 380 (422)
T ss_dssp HHHHHHHHHTTTCEEEBC-SBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHcCCeecCC-CeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeC
Confidence 999999999999987653 456677888754211 0 234444 56678999876
No 112
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.19 E-value=2.8e-09 Score=100.24 Aligned_cols=226 Identities=13% Similarity=0.113 Sum_probs=147.0
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
+.-|.|-..+|.. +|.|.+++...+. .+ .+++... . .++ ++.+++++|.+. .++.+++| +
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~-~~-~~y~~~~------~-~~l----r~~la~~~~~~~----~~i~~t~g~~ 77 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLN-CI-RHYPEPD------A-GTL----RQMLAKRNSVDN----NAILVTNGPT 77 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGG-GG-GSCCCTT------C-HHH----HHHHHHHTTCCG----GGEEEESHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHh-HH-hcCCCCc------H-HHH----HHHHHHHhCcCH----HHEEEcCCHH
Confidence 4567777777777 8999999987652 22 2333321 1 334 468889999875 25777776 6
Q ss_pred hhHHHHHHhhCCc--------------------------cc---------ccccEEEEc-Ccc-cccccChHHHHHHhhh
Q psy10669 107 PANFAVCEKALPT--------------------------NN---------ARFDFLSSG-TTC-YSRCLDYARFRQICDE 149 (337)
Q Consensus 107 ~AN~~v~~aLl~~--------------------------~~---------a~pklII~~-~S~-~~~~~d~~~l~eia~~ 149 (337)
+|+..++.++..+ .. .++++|++. +.+ .+...|.+++.+|++.
T Consensus 78 ~al~~~~~~l~gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 157 (350)
T 3fkd_A 78 AAFYQIAQAFRGSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLND 157 (350)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCCTTCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCccCCCCEEEEeCCCCCcCCCCCHHHHHHHHHh
Confidence 7888877887532 11 126777665 322 4688999999999988
Q ss_pred cC-CeEEEeccccccccc--------------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHH
Q psy10669 150 TD-SIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIG 204 (337)
Q Consensus 150 ~g-a~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~ia 204 (337)
++ .++++|++|...... .++++. | ..|+++. ++.+.+.....+ .++++...+
T Consensus 158 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 234 (350)
T 3fkd_A 158 HPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP---WAVNALAIE 234 (350)
T ss_dssp CTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT---TCSCHHHHH
T ss_pred CCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCC---CCCCHHHHH
Confidence 75 799999999642211 122232 2 2266654 577777655333 356666666
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh-cCceeccC
Q psy10669 205 AIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKN 281 (337)
Q Consensus 205 ala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~ 281 (337)
++..++... ..+.+..++..++.++|.+.|.+. |+++.. +..+.+++.+... +..++.+.|.+ .||.+.+-
T Consensus 235 ~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~~g 307 (350)
T 3fkd_A 235 AAKFILIHP--AQFTLPIRKWQRNTVDFITALNRLDGVEVHP--SGTTFFLLRLKKG--TAAELKKYMLEEYNMLIRDA 307 (350)
T ss_dssp HHHHHHHCT--TTTCCCHHHHHHHHHHHHHHHHHSTTEEECC--CSSSEEEEEESSS--CHHHHHHHHHHTTCEECEEC
T ss_pred HHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHhcCCCcEECC--CCCcEEEEECCCC--CHHHHHHHHHHHCCEEEEeC
Confidence 666666542 224344455559999999999986 898865 5566777777653 67788888887 99998853
No 113
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.19 E-value=2.5e-10 Score=112.50 Aligned_cols=190 Identities=12% Similarity=0.067 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c-hhHHHHHHhhC---C-c----------------------------
Q psy10669 74 IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S-PANFAVCEKAL---P-T---------------------------- 119 (337)
Q Consensus 74 ~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t-~AN~~v~~aLl---~-~---------------------------- 119 (337)
..+++..+++.+++++|++. . +.+++| | .+|+.++.++. + +
T Consensus 131 ~~~~~~~~~~~la~~~g~~~----~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~ 205 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLNV----H-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVET 205 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCC----E-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCC----C-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEE
Confidence 56788889999999999986 3 566555 7 56775556542 1 1
Q ss_pred ----------------cc-c-----cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc---------
Q psy10669 120 ----------------NN-A-----RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------- 166 (337)
Q Consensus 120 ----------------~~-a-----~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------- 166 (337)
.+ . ++.+|++..++ .+...|+++|.++|+++|++++||+||.....+
T Consensus 206 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~ 285 (456)
T 2z67_A 206 VLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAF 285 (456)
T ss_dssp EEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred eccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhh
Confidence 11 1 23445444332 478899999999999999999999888643321
Q ss_pred -----eeeeec-c-----C-Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669 167 -----GVKGVT-K-----T-GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231 (337)
Q Consensus 167 -----g~~~T~-~-----~-Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~ 231 (337)
.+++++ | . +|+++. ++.+.+.+. +++.. +..+ .+++..++..+....+++..++..+++++
T Consensus 286 ~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~-~~g~~--~~~~-~~~~~aal~~l~~~~~~~~~~~~~~~~~~ 361 (456)
T 2z67_A 286 KYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLS-YPGRA--SATP-VVNTLVSLLSMGSKNYLELVKNQKNSKKL 361 (456)
T ss_dssp TSCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTT-SCSCB--CSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcC-CCCCC--CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123332 2 2 365554 355566443 33321 1222 45555666666555678889999999999
Q ss_pred HHHHHHhC----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669 232 LSDEMIKR----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276 (337)
Q Consensus 232 l~~~L~~~----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI 276 (337)
|.+.|.+. |+.+.. .+ .++++.++..+. ..++.+.|.+.||
T Consensus 362 l~~~L~~~~~~~g~~v~~--~~-~~v~~~~~~~~~-~~~l~~~L~~~gi 406 (456)
T 2z67_A 362 LDELLNDLSKKTGGKFLD--VE-SPIASCISVNSD-PVEIAAKLYNLRV 406 (456)
T ss_dssp HHHHHHHHHHHSSCCBCC--CC-CSSEEEEECSSC-HHHHHHHHHHTTE
T ss_pred HHHHHHhcccccCCEecC--CC-CeEEEEEecccH-HHHHHHHHHHcCC
Confidence 99999986 887765 33 556666632232 3567888887776
No 114
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.18 E-value=1.8e-09 Score=103.35 Aligned_cols=241 Identities=15% Similarity=0.037 Sum_probs=146.6
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC-
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG- 105 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg- 105 (337)
+..|.|...++- .+|.+.+++...+.. ...+ |.......+++....+.+.+.+|.+ .+ .++.+++|
T Consensus 41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~------y~~~~g~~~lr~~la~~~~~~~g~~~~~---~~v~~~~g~ 110 (389)
T 1o4s_A 41 EDVINLTAGEPDFPTPEPVVEEAVRFLQK-GEVK------YTDPRGIYELREGIAKRIGERYKKDISP---DQVVVTNGA 110 (389)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHTT-CCCC------CCCTTCCHHHHHHHHHHHHHHHTCCCCG---GGEEEESHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHhc-CCCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCH---HHEEEecCH
Confidence 345777666654 378999999876543 1111 2222223556543334444445753 11 24666666
Q ss_pred chhHHHHHHhhCCc-------------------------------c----------c--c---cccEEEEc-Ccc-cccc
Q psy10669 106 SPANFAVCEKALPT-------------------------------N----------N--A---RFDFLSSG-TTC-YSRC 137 (337)
Q Consensus 106 t~AN~~v~~aLl~~-------------------------------~----------~--a---~pklII~~-~S~-~~~~ 137 (337)
+.|+..++.+++++ . + + ++++|++. .++ .+..
T Consensus 111 t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 190 (389)
T 1o4s_A 111 KQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVV 190 (389)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCC
Confidence 78988888888654 0 0 0 25666664 322 3465
Q ss_pred cC---hHHHHHHhhhcCCeEEEeccccccccce----------------eeeec-c----C---Cchhhh--hHHHHHhh
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHISGLIAG----------------VKGVT-K----T---GEKILY--DYEEKINN 188 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~-~----~---Gg~i~~--~l~~~i~~ 188 (337)
.| +++|.++|+++|+++++|++|..+...+ ++++. | . .|+++. ++.+.+..
T Consensus 191 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~ 270 (389)
T 1o4s_A 191 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSK 270 (389)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHH
Confidence 55 7788899999999999999998765421 12332 2 1 266654 46665554
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669 189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~ 268 (337)
...++.. ++++...++...++. ...++.++++.++.++|.+.|.+.|+++... ..+..+++.+. .+..++.
T Consensus 271 ~~~~~~~-~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~---~~~~~l~ 341 (389)
T 1o4s_A 271 IQSHTTS-CINTVAQYAALKALE----VDNSYMVQTFKERKNFVVERLKKMGVKFVEP-EGAFYLFFKVR---GDDVKFC 341 (389)
T ss_dssp HHHHHTC-SCCHHHHHHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC-SBSSEEEEECS---SCHHHHH
T ss_pred Hhhhccc-CCCHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHHHhcCCeeecC-CcceEEEEeCC---CCHHHHH
Confidence 3322223 334444444333332 2267889999999999999999989887642 33556667765 3567777
Q ss_pred HHHh-hcCceeccCc------ccchhhh
Q psy10669 269 LVLE-EIAIACNKNT------GISLAAE 289 (337)
Q Consensus 269 ~~L~-~~gI~v~~~~------girig~~ 289 (337)
+.|. +.||.+.+.. .+||+..
T Consensus 342 ~~l~~~~gi~v~~g~~f~~~~~~Ris~~ 369 (389)
T 1o4s_A 342 ERLLEEKKVALVPGSAFLKPGFVRLSFA 369 (389)
T ss_dssp HHHHHHHCEECEEGGGGTCTTEEEEECC
T ss_pred HHHHHHCCEEEeCchhcCCCCeEEEEEe
Confidence 7775 7899987532 5677643
No 115
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.18 E-value=4.2e-10 Score=109.26 Aligned_cols=225 Identities=15% Similarity=0.163 Sum_probs=142.0
Q ss_pred eeeccCCCCC--HHHHHHHhhhhhhccCCCCCCCcCcCc-cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669 34 ELIASENFTS--LAVLECLGSCLQNKYSEGLPGKRYYGG-NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF 110 (337)
Q Consensus 34 ~l~asen~~~--p~V~~a~~~~l~~~y~~g~~g~r~~~G-~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~ 110 (337)
.|-..++..+ +.+.+++...+.. + + |.. .....+++ +.+++++|.+. .+...||+.|+.
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~----~----~-y~~~~~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~ 81 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDS----Q----W-LSNGGPLVREFE----ERVAGLAGVRH-----AVATCNATAGLQ 81 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHH----T----C-CSSSCHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHH
T ss_pred cccccCCCCCChHHHHHHHHHHHhc----C----C-cccCCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHH
Confidence 4556666664 4899988766542 1 1 332 33445555 57889999863 355556689998
Q ss_pred HHHHhhCCc-----------------------------------------ccc---cccEEEEcCcccccccChHHHHHH
Q psy10669 111 AVCEKALPT-----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQI 146 (337)
Q Consensus 111 ~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~ei 146 (337)
.++.++.+. +.+ ++++|++.+ .++...|+++|.++
T Consensus 82 ~~l~~l~~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~-~tG~~~~l~~i~~l 160 (424)
T 2po3_A 82 LLAHAAGLTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVH-LWGRPCAADQLRKV 160 (424)
T ss_dssp HHHHHHTCCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEEC-GGGCCCCHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEEC-CCCCcCCHHHHHHH
Confidence 888888431 111 267888754 56788999999999
Q ss_pred hhhcCCeEEEeccccccccc----------eeeeec---c-----CCchhhh---hHHHHHhhccCCCCC--------CC
Q psy10669 147 CDETDSIMFADMSHISGLIA----------GVKGVT---K-----TGEKILY---DYEEKINNAVFPSLQ--------GG 197 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~Gli~----------g~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~~~--------g~ 197 (337)
|+++|+++++|++|..|+.- .++++. | .||+++. ++.+.+.....++.. |.
T Consensus 161 a~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~ 240 (424)
T 2po3_A 161 ADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGT 240 (424)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCC
T ss_pred HHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCc
Confidence 99999999999999976642 123332 2 3566664 355555433222111 11
Q ss_pred C-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-C-CCC--CeEEEEEecCC--CcchHHHHH
Q psy10669 198 P-HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-G-GTD--VHLILIDLRKN--KLTGSKVEL 269 (337)
Q Consensus 198 ~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~-~t~--~h~v~V~~~~~--~~~~~~~~~ 269 (337)
+ .++.+++ ++++... ...+++.++..+++++|.+.|.+. |+++.. . ++. -+++.+.+... +.+..++.+
T Consensus 241 ~~~~~~~~a-a~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 317 (424)
T 2po3_A 241 NAKMSEAAA-AMGLTSL--DAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVME 317 (424)
T ss_dssp BCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHH
T ss_pred CCCcCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHH
Confidence 1 1112211 1222222 245678899999999999999885 888864 1 222 26776777531 456788889
Q ss_pred HHhhcCceecc
Q psy10669 270 VLEEIAIACNK 280 (337)
Q Consensus 270 ~L~~~gI~v~~ 280 (337)
.|.+.||.+..
T Consensus 318 ~L~~~gI~v~~ 328 (424)
T 2po3_A 318 VLKAEGVHTRA 328 (424)
T ss_dssp HHHHTTEECBC
T ss_pred HHHHCCCceec
Confidence 99999999875
No 116
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.17 E-value=3.4e-09 Score=104.88 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=97.2
Q ss_pred ccEEEEcCcc-cccc-cChHHHHHHhhhcCCeEEEeccccccccc-------e---eeee-cc-----C------Cchhh
Q psy10669 124 FDFLSSGTTC-YSRC-LDYARFRQICDETDSIMFADMSHISGLIA-------G---VKGV-TK-----T------GEKIL 179 (337)
Q Consensus 124 pklII~~~S~-~~~~-~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T-~~-----~------Gg~i~ 179 (337)
+++|++...+ .+.. .|+++|.++|+++|+++++|++|..|+++ + ++++ +| . .|+++
T Consensus 204 t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~ 283 (474)
T 1wyu_B 204 VAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVG 283 (474)
T ss_dssp EEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred ceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEE
Confidence 5677776433 4555 58999999999999999999999877653 1 2222 22 1 25554
Q ss_pred h--hHHHHHhh-cc------------CC-----CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 180 Y--DYEEKINN-AV------------FP-----SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 180 ~--~l~~~i~~-~~------------~p-----~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
. ++.+.+.. .+ .| ...++++....++....+..+....+++..++..+++++|.+.|.+.
T Consensus 284 ~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 284 VKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp ECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4 34444431 00 01 01223444333333333333323445677899999999999999998
Q ss_pred CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
|+++..++...|..++++ ..+.+..++.+.|.+.||.+.
T Consensus 364 g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~ 402 (474)
T 1wyu_B 364 GYRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPP 402 (474)
T ss_dssp TCBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCC
T ss_pred CcEecCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCcccc
Confidence 998854333445466676 345578888888888899863
No 117
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.17 E-value=1.7e-10 Score=109.46 Aligned_cols=273 Identities=10% Similarity=0.056 Sum_probs=157.7
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~ 111 (337)
.+++-.+++..++ +++++...+... + |.......+++ +.+++++|.++ .+.+.||+.|+..
T Consensus 8 ~~~l~~~~~~~~~-~~~~~~~~~~~~--------~-~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~ 68 (374)
T 3uwc_A 8 YSYLERQFADIEP-YLNDLREFIKTA--------D-FTLGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALAM 68 (374)
T ss_dssp SCCHHHHTSSCHH-HHHHHHHHHHHT--------C-CSSCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHH
T ss_pred eeccccCCCCchH-HHHHHHHHHHcC--------C-cccChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHH
Confidence 3455556666677 888887654431 1 22233445555 68899999874 5777888999988
Q ss_pred HHHhh-CCc---------------------------------------ccc-----cccEEEEcCcccccccChHHHHHH
Q psy10669 112 VCEKA-LPT---------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFRQI 146 (337)
Q Consensus 112 v~~aL-l~~---------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~ei 146 (337)
++.++ +++ .+. ++++|+.. ...+...|+++|.++
T Consensus 69 ~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~-n~~G~~~~~~~i~~~ 147 (374)
T 3uwc_A 69 SFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDKTKAIMPV-HYTGNIADMPALAKI 147 (374)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTTEEEECCB-CGGGCCCCHHHHHHH
T ss_pred HHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCCceEEEEe-CCcCCcCCHHHHHHH
Confidence 88988 654 111 15677743 345788899999999
Q ss_pred hhhcCCeEEEeccccccccc----------eeeee-c--c------CCchhhh---hHHHHHhhccCCCC-------CCC
Q psy10669 147 CDETDSIMFADMSHISGLIA----------GVKGV-T--K------TGEKILY---DYEEKINNAVFPSL-------QGG 197 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~Gli~----------g~~~T-~--~------~Gg~i~~---~l~~~i~~~~~p~~-------~g~ 197 (337)
|+++|+++++|++|+.|..- .++++ + | .||++++ ++.+.+......+. ..+
T Consensus 148 ~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (374)
T 3uwc_A 148 AKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYG 227 (374)
T ss_dssp HHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEESSCC
T ss_pred HHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccCcccccc
Confidence 99999999999999987532 12222 2 2 2466654 35554443211100 011
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecCCC---CC-eEEEEEecCCCcchHHHHHHH
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTGGT---DV-HLILIDLRKNKLTGSKVELVL 271 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~~t---~~-h~v~V~~~~~~~~~~~~~~~L 271 (337)
.+. .+.++..++........+++.++..++++++.+.|.+.+ +++..... .. +.+++... +..++.+.|
T Consensus 228 ~~~-~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L 302 (374)
T 3uwc_A 228 INC-RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK----YRDQLFQYL 302 (374)
T ss_dssp CBC-BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET----THHHHHHHH
T ss_pred ccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC----CHHHHHHHH
Confidence 111 122222222222234567888999999999999999865 66643111 11 33444332 567888899
Q ss_pred hhcCceeccCc--ccchhhhhHhhhCCCH------HHHHHHHh----hCCCcHHHHHHHHHHHHHHHhcCC
Q psy10669 272 EEIAIACNKNT--GISLAAEIQAISGPKL------VDFQTCLH----KNEDIVKKVAALKKEIEDYSNQFE 330 (337)
Q Consensus 272 ~~~gI~v~~~~--girig~~~~t~~G~~~------~~~~~~~~----~~~~~~~~~~~lr~~V~~~~~~fp 330 (337)
.+.||.+.... .+... +.....|... .++....+ ....++++++.+-+.+.++..+.+
T Consensus 303 ~~~gi~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~~ 372 (374)
T 3uwc_A 303 KDNGIEVKIHYPIAMHLQ-PAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKH 372 (374)
T ss_dssp HHTTBCCBCSCSSCGGGS-GGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred HHCCCccccCCCCccccC-hhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 98899887532 11111 1222223221 11212111 111235677777777777776543
No 118
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.17 E-value=1.9e-09 Score=103.86 Aligned_cols=257 Identities=13% Similarity=0.043 Sum_probs=151.9
Q ss_pred hhhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669 11 LAQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA 88 (337)
Q Consensus 11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l 88 (337)
+....+.++..+.+- .++...|.|...++- .+|.+.+++...+.+. ..++ .......+++....+.+.+.
T Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y------~~~~g~~~l~~~la~~~~~~ 78 (411)
T 2o0r_A 7 LRPYATTVFAEMSAL-ATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQY------PPGPGSAPLRRAIAAQRRRH 78 (411)
T ss_dssp GGGGSSCHHHHHHHH-HHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSC------CCTTCCHHHHHHHHHHHHHH
T ss_pred hHhcCccHHHHHHHH-hhcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCC------CCCCCCHHHHHHHHHHHHHH
Confidence 344445454444432 223456777766654 3799999998765431 1122 11122345554444555666
Q ss_pred cCCCC-CCCcceeecCCC-chhHHHHHHhhCCc--------------------------------c-----c-------c
Q psy10669 89 FNLDP-EQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------N-----N-------A 122 (337)
Q Consensus 89 fg~~~-~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------~-----~-------a 122 (337)
+|.+. +++ +|.+++| +.|+..++.+++++ . . +
T Consensus 79 ~g~~~~~~~--~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 156 (411)
T 2o0r_A 79 FGVDYDPET--EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA 156 (411)
T ss_dssp HCCCCCTTT--SEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHH
T ss_pred cCCCCCCCc--eEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHh
Confidence 67531 110 4666666 78988888888654 1 0 0
Q ss_pred ---cccEEEEc-Ccc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c---
Q psy10669 123 ---RFDFLSSG-TTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K--- 173 (337)
Q Consensus 123 ---~pklII~~-~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~--- 173 (337)
++++|++. .++ .+...|. ++|.++|+++|+++++|++|..+... .++++. |
T Consensus 157 l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~ 236 (411)
T 2o0r_A 157 VTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN 236 (411)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT
T ss_pred hccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC
Confidence 25777765 222 2455554 67889999999999999999864331 112222 2
Q ss_pred -CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669 174 -TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG 247 (337)
Q Consensus 174 -~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~ 247 (337)
.| |+++. ++.+.+......... +++++..+++..++... ....++.++++.++.++|.+.|.+.|+++...
T Consensus 237 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~- 313 (411)
T 2o0r_A 237 CTGWKIGWACGPAELIAGVRAAKQYLSY-VGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEIGFAVHDS- 313 (411)
T ss_dssp CTTTCEEEEECCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCC-
T ss_pred CccceEEEEeeCHHHHHHHHHHHhhccC-CCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCC-
Confidence 23 66654 455554432111112 33445566666666543 33456788899999999999999889988652
Q ss_pred CCCeEEEEEecCC-CcchHHHHHHH-hhcCceecc
Q psy10669 248 TDVHLILIDLRKN-KLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 248 t~~h~v~V~~~~~-~~~~~~~~~~L-~~~gI~v~~ 280 (337)
..+..+++++... +.+..++.+.| ++.||.+.+
T Consensus 314 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 348 (411)
T 2o0r_A 314 YGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIP 348 (411)
T ss_dssp CBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEE
T ss_pred CeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcC
Confidence 3355777888642 13566777765 467999864
No 119
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.16 E-value=4.7e-10 Score=110.48 Aligned_cols=196 Identities=11% Similarity=0.077 Sum_probs=131.3
Q ss_pred HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc---------------------------------cc------
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT---------------------------------NN------ 121 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~---------------------------------~~------ 121 (337)
++.+++ ||+++ ++.+++| +.||..++.+++++ ..
T Consensus 63 ~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~ 136 (446)
T 2x3l_A 63 MKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNK 136 (446)
T ss_dssp HHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEE
T ss_pred HHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCC
Confidence 468889 99874 5777777 58999999998764 10
Q ss_pred ------c--cccEEEEcCcc-cccccChHHHHHHhhhcCCeEEEeccccccc------cc-------eeeee-cc-----
Q psy10669 122 ------A--RFDFLSSGTTC-YSRCLDYARFRQICDETDSIMFADMSHISGL------IA-------GVKGV-TK----- 173 (337)
Q Consensus 122 ------a--~pklII~~~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl------i~-------g~~~T-~~----- 173 (337)
. ++++|++..++ ++...|+++|.++|+++|+++++|+||+..+ +. .++++ +|
T Consensus 137 ~d~~~l~~~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~S~~K~l~~~ 216 (446)
T 2x3l_A 137 VNLSRLNNDGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPAL 216 (446)
T ss_dssp EEC-------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEECHHHHSSSC
T ss_pred CCHHHHcCCCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEECCccccccc
Confidence 1 25667766544 5788999999999999999999999998722 11 12333 33
Q ss_pred -CCchhhh--hH--HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669 174 -TGEKILY--DY--EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT 248 (337)
Q Consensus 174 -~Gg~i~~--~l--~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t 248 (337)
.+|+++. ++ ...+.........++++...++++..++..+.....+.+.++..+++++|++. |+++....
T Consensus 217 ~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~----g~~~~~~~- 291 (446)
T 2x3l_A 217 TMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK----GFEMLQVD- 291 (446)
T ss_dssp TTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----TCEEEECS-
T ss_pred cccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc----CCEECcCC-
Confidence 2355543 22 22333322223357888899999988887775322233677777777777665 89988632
Q ss_pred CCeEEEEEecCCCcchHHHHHHHhhcCceec-cC-cccchhhhh
Q psy10669 249 DVHLILIDLRKNKLTGSKVELVLEEIAIACN-KN-TGISLAAEI 290 (337)
Q Consensus 249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~-~~-~girig~~~ 290 (337)
+...+++++. +.++.++.+.|.+.||.+. .. ..+|++...
T Consensus 292 ~~~~l~i~~~--~~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~ 333 (446)
T 2x3l_A 292 DPLKLLIKYE--GFTGHDIQNWFMNAHIYLELADDYQALAILPL 333 (446)
T ss_dssp STTEEEEECT--TSCHHHHHHHHHHTTEEESEECSSCEEEECCC
T ss_pred CCeEEEEEeC--CcCHHHHHHHHHHCCCEEEecCCCEEEEEeec
Confidence 3335677765 5678889999988899997 32 278887653
No 120
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.16 E-value=4.3e-09 Score=100.89 Aligned_cols=227 Identities=12% Similarity=0.008 Sum_probs=137.9
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC-chhHHHHHHhhCC
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG-SPANFAVCEKALP 118 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg-t~AN~~v~~aLl~ 118 (337)
.+|.+.+++...+.+ +. .... |.......+++....+.+.+.+|. +. .+|.+++| +.|+..++.++++
T Consensus 50 ~~~~v~~a~~~~~~~-~~---~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~----~~v~~t~g~t~a~~~~~~~~~~ 120 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEK-EP---KSVM-YTPANGIPELREELAAFLKKYDHLEVSP----ENIVITIGGTGALDLLGRVLID 120 (407)
T ss_dssp CHHHHHHHHHHHHHH-CG---GGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG----GGEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhh-cc---cccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc----ceEEEecCHHHHHHHHHHHhcC
Confidence 357899988776543 11 0111 322222355654333344444584 33 25777777 7899888899865
Q ss_pred c------------------------------------------cc-----c--cccEEEEcCc--c-cccccChH---HH
Q psy10669 119 T------------------------------------------NN-----A--RFDFLSSGTT--C-YSRCLDYA---RF 143 (337)
Q Consensus 119 ~------------------------------------------~~-----a--~pklII~~~S--~-~~~~~d~~---~l 143 (337)
+ .+ . ++++|++.++ + .+...|.+ +|
T Consensus 121 ~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i 200 (407)
T 2zc0_A 121 PGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKAL 200 (407)
T ss_dssp TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHH
Confidence 4 01 1 3567643322 2 35777776 77
Q ss_pred HHHhhhcCCeEEEeccccccccc-------------e---eeeec-c------CCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669 144 RQICDETDSIMFADMSHISGLIA-------------G---VKGVT-K------TGEKILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~-------------g---~~~T~-~------~Gg~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
.++|+++|+++++|++|..+... + +.+|. | .+|+++. ++.+.+.....+...+ +
T Consensus 201 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~ 279 (407)
T 2zc0_A 201 LEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFC-A 279 (407)
T ss_dssp HHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHHHTTTTSS-S
T ss_pred HHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHHHHHhhcCC-C
Confidence 88999999999999999875442 1 22332 2 2355554 5666666544444343 3
Q ss_pred cHHHHHHHHHHHHHHh-c-hhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 199 HNHAIGAIATAMLQAQ-S-DEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 199 ~~~~iaala~a~~e~~-~-~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
++...+++..++.... + ...++.++++.++.++|.+.|.+. |+++.. ...+..+++.+.. +.+..++.+.|.+.
T Consensus 280 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~l~~~ 357 (407)
T 2zc0_A 280 PAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTK-PIAGMFVMFFLPE-GADGISFANELMER 357 (407)
T ss_dssp CHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCC-CSBSSEEEEECST-TCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEec-CCCcEEEEEEcCC-CCCHHHHHHHHHHh
Confidence 4555555555554321 1 234567788889999999999873 777653 2345577788754 45777888888775
Q ss_pred -Cceecc
Q psy10669 275 -AIACNK 280 (337)
Q Consensus 275 -gI~v~~ 280 (337)
||.+.+
T Consensus 358 ~gi~v~~ 364 (407)
T 2zc0_A 358 EGVVVVP 364 (407)
T ss_dssp TCEECBC
T ss_pred CCeEEEC
Confidence 999875
No 121
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.15 E-value=1.5e-09 Score=106.41 Aligned_cols=237 Identities=19% Similarity=0.185 Sum_probs=144.4
Q ss_pred eeeeccCCC-----CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669 33 IELIASENF-----TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP 107 (337)
Q Consensus 33 i~l~asen~-----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~ 107 (337)
|.+.+.+++ .+|.|.+++...+. ++. ..+ +.| ......+++ +++++++|.+. .+..+||+.
T Consensus 79 lD~~sg~~~~~lgh~~p~v~~Ai~~~~~-~~~--~~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGse 144 (439)
T 2oat_A 79 FDFLSSYSAVNQGHCHPKIVNALKSQVD-KLT--LTS-RAF-YNNVLGEYE----EYITKLFNYHK-----VLPMNTGVE 144 (439)
T ss_dssp EESSGGGGTTTTCBTCHHHHHHHHHHHT-TCS--CCC-TTS-EESSHHHHH----HHHHHHHTCSE-----EEEESSHHH
T ss_pred EEccCCcccccCCCCCHHHHHHHHHHHH-hcC--ccc-Ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCCHHH
Confidence 444444444 58999999987644 332 222 223 234445565 47778888542 345566799
Q ss_pred hHHHHHHhhC-----------C-c-------------------------------------------------ccc--cc
Q psy10669 108 ANFAVCEKAL-----------P-T-------------------------------------------------NNA--RF 124 (337)
Q Consensus 108 AN~~v~~aLl-----------~-~-------------------------------------------------~~a--~p 124 (337)
||..++.++. + + .+. ++
T Consensus 145 A~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~ 224 (439)
T 2oat_A 145 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNV 224 (439)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCCCCE
Confidence 9888777653 1 1 000 14
Q ss_pred cEEEEcCcccc---ccc----ChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc-------CCc
Q psy10669 125 DFLSSGTTCYS---RCL----DYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK-------TGE 176 (337)
Q Consensus 125 klII~~~S~~~---~~~----d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~-------~Gg 176 (337)
++|++.+ +++ ... ++++|+++|+++|++|++|++| .|+- + + +.+..| .+|
T Consensus 225 ~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G 302 (439)
T 2oat_A 225 AAFMVEP-IQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVS 302 (439)
T ss_dssp EEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCE
T ss_pred EEEEEEC-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEEEecccccCCCCCeE
Confidence 6788764 332 233 7889999999999999999999 4532 1 1 111112 123
Q ss_pred hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEE
Q psy10669 177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLI 253 (337)
Q Consensus 177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v 253 (337)
+++. ++.+.+.+......+ +.++...++...++..+.+ .++.+++.++.++|.+.|.+.+++++. ......++
T Consensus 303 ~v~~~~~~~~~l~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~ 378 (439)
T 2oat_A 303 AVLCDDDIMLTIKPGEHGSTY-GGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLN 378 (439)
T ss_dssp EEEECHHHHTTSCTTSSCCSS-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEE
T ss_pred EEEECHHHHhccCCCCcccCC-CcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEE
Confidence 4443 454444432222333 3456666666666666532 257889999999999999887665322 11245677
Q ss_pred EEEecCCC-cchHHHHHHHhhcCceeccC--cccchhhh
Q psy10669 254 LIDLRKNK-LTGSKVELVLEEIAIACNKN--TGISLAAE 289 (337)
Q Consensus 254 ~V~~~~~~-~~~~~~~~~L~~~gI~v~~~--~girig~~ 289 (337)
.+.+.... .+..++.+.|.+.||.+.+. ..+||..+
T Consensus 379 ~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~iRi~~~ 417 (439)
T 2oat_A 379 AIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPP 417 (439)
T ss_dssp EEEECCCSSCCHHHHHHHHHHTTEECCBSSSSEEEECCC
T ss_pred EEEEecCccHHHHHHHHHHHHCCeEEecCCCCEEEEECc
Confidence 78876531 35677888888889999874 26888644
No 122
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.15 E-value=2.6e-09 Score=102.27 Aligned_cols=226 Identities=12% Similarity=0.082 Sum_probs=141.0
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----- 117 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----- 117 (337)
+|.|.+++...+.. +. ..+.+ | ......+++ +++++++|.+. .+..+||++||..++.+++
T Consensus 57 ~p~v~~a~~~~~~~-~~--~~~~~-~-~~~~~~~l~----~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~~ 122 (406)
T 4adb_A 57 HPELREALNEQASK-FW--HTGNG-Y-TNEPVLRLA----KKLIDATFADR-----VFFCNSGAEANEAALKLARKFAHD 122 (406)
T ss_dssp CHHHHHHHHHHHTT-CS--CCCTT-S-CCHHHHHHH----HHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cc--cccCC-c-CCHHHHHHH----HHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHHh
Confidence 89999999876543 21 11122 2 223334444 57889998763 3555566899888777763
Q ss_pred ----C-c-----------------------------------------------ccc---cccEEEEcCccccccc----
Q psy10669 118 ----P-T-----------------------------------------------NNA---RFDFLSSGTTCYSRCL---- 138 (337)
Q Consensus 118 ----~-~-----------------------------------------------~~a---~pklII~~~S~~~~~~---- 138 (337)
+ + +.+ ++++|++.+ +++.-+
T Consensus 123 ~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~p-~np~g~~~~~ 201 (406)
T 4adb_A 123 RYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVEP-IQGEGGVVPA 201 (406)
T ss_dssp HTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEECS-EETTTTSEEC
T ss_pred cCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEeC-CcCCCCCccC
Confidence 2 1 000 268888884 565333
Q ss_pred ---ChHHHHHHhhhcCCeEEEeccccccc--cc--------e-----eeeecc------CCchhhh--hHHHHHhhccCC
Q psy10669 139 ---DYARFRQICDETDSIMFADMSHISGL--IA--------G-----VKGVTK------TGEKILY--DYEEKINNAVFP 192 (337)
Q Consensus 139 ---d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g-----~~~T~~------~Gg~i~~--~l~~~i~~~~~p 192 (337)
++++|.++|+++|++|++|++|+ |+ .+ + +++ +| .+|+++. ++.+.+.+....
T Consensus 202 ~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t~-sK~~~~G~r~G~~~~~~~~~~~~~~~~~~ 279 (406)
T 4adb_A 202 SNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLTT-AKALGGGFPVGALLATEECARVMTVGTHG 279 (406)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE-CGGGGTTSCCEEEEECHHHHHTCCTTSSC
T ss_pred CHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEEe-chhhcCCCCeEEEEEcHHHHhhhccCCcC
Confidence 67788899999999999999996 33 11 1 222 22 2355544 466666544333
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC--EEec-CCCCCeEEEEEecCC-CcchHHHH
Q psy10669 193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY--HVVT-GGTDVHLILIDLRKN-KLTGSKVE 268 (337)
Q Consensus 193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~--~v~~-~~t~~h~v~V~~~~~-~~~~~~~~ 268 (337)
..+ +.++...++...++..+.. +++.+++.++.++|.+.|.+.+. .+.. ......++.+.+... ..+..++.
T Consensus 280 ~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 355 (406)
T 4adb_A 280 TTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQIS 355 (406)
T ss_dssp CSS-TTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHH
T ss_pred CCC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHH
Confidence 323 5667777777777766532 67889999999999999987432 1111 012345667777542 12567788
Q ss_pred HHHhhcCceeccCc--ccchhhh
Q psy10669 269 LVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 269 ~~L~~~gI~v~~~~--girig~~ 289 (337)
+.|.+.||.+.+.. .+||+.+
T Consensus 356 ~~l~~~gi~v~~~~~~~iRi~~~ 378 (406)
T 4adb_A 356 QEAAKAGVMVLIAGGNVVRFAPA 378 (406)
T ss_dssp HHHHHTTEECEESSTTEEEECCC
T ss_pred HHHHHCCcEEeecCCCeEEEECC
Confidence 88888899998643 7888543
No 123
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.13 E-value=4.5e-09 Score=100.35 Aligned_cols=235 Identities=13% Similarity=0.068 Sum_probs=145.2
Q ss_pred cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHH-HHHHHHHHHHhhcC--CCCCCCcceeecCCC
Q psy10669 31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDE-IEIVAQQRSLKAFN--LDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~-lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg 105 (337)
.-|.|...++- .+|.|.+++...+... ..+++ .+ ..+ ++....+.+.+.+| .+. .+|.+++|
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~-----~~---~~~~lr~~la~~l~~~~g~~~~~----~~v~~t~g 95 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYS-----RW---KNDEFLAAIAHWFSTQHYTAIDS----QTVVYGPS 95 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCC-----CS---CCHHHHHHHHHHHHHHSCCCCCG----GGEEEESC
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCC-----CC---ChHHHHHHHHHHHHHhcCCCCCH----HHEEEcCC
Confidence 45666555542 3799999998765321 11221 11 223 54333344555567 443 25777777
Q ss_pred -chhHHHHHHhhCCc--------------------------------c-----c---------c--cccEEEEc-Ccc-c
Q psy10669 106 -SPANFAVCEKALPT--------------------------------N-----N---------A--RFDFLSSG-TTC-Y 134 (337)
Q Consensus 106 -t~AN~~v~~aLl~~--------------------------------~-----~---------a--~pklII~~-~S~-~ 134 (337)
++|+..++.+++++ + . . +|++|++. +.+ .
T Consensus 96 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~npt 175 (390)
T 1d2f_A 96 VIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPT 175 (390)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTT
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCC
Confidence 67888888888654 1 0 0 25777754 322 2
Q ss_pred ccccC---hHHHHHHhhhcCCeEEEeccccccccce--------e-------eeec-c----CC---chhhh---hHHHH
Q psy10669 135 SRCLD---YARFRQICDETDSIMFADMSHISGLIAG--------V-------KGVT-K----TG---EKILY---DYEEK 185 (337)
Q Consensus 135 ~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g--------~-------~~T~-~----~G---g~i~~---~l~~~ 185 (337)
+...| +++|.++|+++|+++++|++|..+...| + .+|. | .| |+++. ++.+.
T Consensus 176 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 255 (390)
T 1d2f_A 176 GKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDA 255 (390)
T ss_dssp CCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHH
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhhccCccHhhcccChhheEEEECCHHHHHH
Confidence 45555 6778899999999999999998643321 0 2222 2 12 55553 46666
Q ss_pred HhhccC-CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-C-CCEEecCCCCCeEEEEEecCCCc
Q psy10669 186 INNAVF-PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-R-GYHVVTGGTDVHLILIDLRKNKL 262 (337)
Q Consensus 186 i~~~~~-p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~-G~~v~~~~t~~h~v~V~~~~~~~ 262 (337)
+..... ...+++++++..++...++... ....++.++++.++.++|.+.|.+ . |+++..+ ..+.++++++...+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 333 (390)
T 1d2f_A 256 YLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQIP-QSTYLAWLDLRPLNI 333 (390)
T ss_dssp HHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCC-SBCSEEEEECGGGCC
T ss_pred HHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecC-CccEEEEEEccccCC
Confidence 654322 2234577888877777777653 234567788899999999999988 3 8877642 234555688865445
Q ss_pred chHHHHHHHh-hcCceecc
Q psy10669 263 TGSKVELVLE-EIAIACNK 280 (337)
Q Consensus 263 ~~~~~~~~L~-~~gI~v~~ 280 (337)
+..++.+.|. +.||.+.+
T Consensus 334 ~~~~l~~~l~~~~gi~v~~ 352 (390)
T 1d2f_A 334 DDNALQKALIEQEKVAIMP 352 (390)
T ss_dssp CHHHHHHHHHHTTCEECEE
T ss_pred CHHHHHHHHHHHcCEEeeC
Confidence 6777888887 68999875
No 124
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.13 E-value=9.1e-10 Score=107.71 Aligned_cols=229 Identities=13% Similarity=0.073 Sum_probs=137.9
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---- 117 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl---- 117 (337)
.+|.|.+|+...+. ++. ..+ +.| ......+++ +++++++|.+. .+..+||+.||..++.++.
T Consensus 82 ~~p~v~~ai~~~~~-~~~--~~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGseA~~~al~~a~~~~~ 147 (433)
T 1z7d_A 82 CHPNILNAMINQAK-NLT--ICS-RAF-FSVPLGICE----RYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY 147 (433)
T ss_dssp TCHHHHHHHHHHHT-TCS--CCC-TTS-EEHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hCC--Ccc-CCc-CCHHHHHHH----HHHHhhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 58999999987643 332 222 222 222334444 57788888653 3455667999888777642
Q ss_pred -------C-c-----------------------------------------------c--c-c-cccEEEEcCccc--cc
Q psy10669 118 -------P-T-----------------------------------------------N--N-A-RFDFLSSGTTCY--SR 136 (337)
Q Consensus 118 -------~-~-----------------------------------------------~--~-a-~pklII~~~S~~--~~ 136 (337)
+ + + + . ++++||+.+... +.
T Consensus 148 ~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~ 227 (433)
T 1z7d_A 148 EVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGV 227 (433)
T ss_dssp HTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTS
T ss_pred hccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCc
Confidence 1 1 0 0 0 146888764321 22
Q ss_pred cc----ChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc-------CCchhhh--hHHHHHhhc
Q psy10669 137 CL----DYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK-------TGEKILY--DYEEKINNA 189 (337)
Q Consensus 137 ~~----d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~-------~Gg~i~~--~l~~~i~~~ 189 (337)
.. ++++|+++|+++|++|++|++|+ |+- + + +.+..| .+|+++. ++.+.+.+.
T Consensus 228 ~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~ 306 (433)
T 1z7d_A 228 IVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPG 306 (433)
T ss_dssp BCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTT
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhccc
Confidence 22 77899999999999999999996 531 1 1 111112 1233333 454444432
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCCcchHH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~~~~~~ 266 (337)
.....+ +.++...++...++..+.+ .++.+++.++.++|.+.|.+. ++.+.. ......++++.+.....+..+
T Consensus 307 ~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 382 (433)
T 1z7d_A 307 EHGSTY-GGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLD 382 (433)
T ss_dssp CCCCTT-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHH
T ss_pred cccccC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChhHHHH
Confidence 223333 4466666666666766532 257888999999999999874 554321 012456778888653235677
Q ss_pred HHHHHhhcCceeccC--cccchhhh
Q psy10669 267 VELVLEEIAIACNKN--TGISLAAE 289 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~--~girig~~ 289 (337)
+.+.|.+.||.+.+. ..+||..+
T Consensus 383 ~~~~l~~~Gv~v~~~~~~~iRi~~~ 407 (433)
T 1z7d_A 383 ICLKLKENGLITRDVHDKTIRLTPP 407 (433)
T ss_dssp HHHHHHHTTEECCEETTTEEEECCC
T ss_pred HHHHHHHCCeEEecCCCCEEEEECC
Confidence 888888889999863 36888544
No 125
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.12 E-value=2.9e-09 Score=102.01 Aligned_cols=225 Identities=13% Similarity=0.064 Sum_probs=135.5
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----- 117 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----- 117 (337)
+|.|.+++...+. ++..++ +++ ......+++ +++++++|.+. .+..+||+.||..++.++.
T Consensus 54 ~p~v~~a~~~~~~-~~~~~~--~~~--~~~~~~~l~----~~la~~~~~~~-----v~~~~gg~ea~~~al~~~~~~~~~ 119 (395)
T 3nx3_A 54 HAKFNAKIKAQVD-KLLHTS--NLY--YNENIAAAA----KNLAKASALER-----VFFTNSGTESIEGAMKTARKYAFN 119 (395)
T ss_dssp CHHHHHHHHHHHT-TCSCCC--TTS--BCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-hccccc--ccc--CCHHHHHHH----HHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhhc
Confidence 8999999987644 322121 111 123334454 57788888542 3555666999888776552
Q ss_pred ---C-c-----------------------------------------------ccc---cccEEEEcCccccc---ccC-
Q psy10669 118 ---P-T-----------------------------------------------NNA---RFDFLSSGTTCYSR---CLD- 139 (337)
Q Consensus 118 ---~-~-----------------------------------------------~~a---~pklII~~~S~~~~---~~d- 139 (337)
+ + +.+ ++++|++.+ +++. ..+
T Consensus 120 ~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~-~~~~~G~~~~~ 198 (395)
T 3nx3_A 120 KGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILES-VQGEGGINPAN 198 (395)
T ss_dssp TTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEES-EECTTSCEECC
T ss_pred cCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeC-ccCCCCcccCC
Confidence 0 0 001 156777764 4433 333
Q ss_pred ---hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c------CCchhhh--hH-HHHHhhccCCCC
Q psy10669 140 ---YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K------TGEKILY--DY-EEKINNAVFPSL 194 (337)
Q Consensus 140 ---~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~------~Gg~i~~--~l-~~~i~~~~~p~~ 194 (337)
+++|.++|+++|++|++|++|. .|-.+ ++ ..|. | ..|+++. ++ .+.+.+......
T Consensus 199 ~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~ 278 (395)
T 3nx3_A 199 KDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHGST 278 (395)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTSCCEEEEECHHHHHHHSCTTCCSSC
T ss_pred HHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCCceEEEEEchhhhhhhcCCcccCCC
Confidence 7889999999999999999997 43322 10 1111 2 1234433 45 666655432222
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
+ +.++...++...++..+.. +++.+++.++.+++++.|.+. ++.... ....++++.+.... +..++.+
T Consensus 279 ~-~~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~~~~-~~~~~~~ 351 (395)
T 3nx3_A 279 Y-GGNPLVCAGVNAVFEIFKE---EKILENVNKLTPYLEQSLDELINEFDFCKKRK--GLGFMQGLSLDKSV-KVAKVIQ 351 (395)
T ss_dssp B-SCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EETTEEEEEECTTS-CHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--eEEEEEEEEeCCcc-hHHHHHH
Confidence 3 4566666666666665532 366778888888888888762 232222 34567778886543 5777888
Q ss_pred HHhhcCceeccCc--ccchhhh
Q psy10669 270 VLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 270 ~L~~~gI~v~~~~--girig~~ 289 (337)
.|.+.||.+.+.. .+||..+
T Consensus 352 ~l~~~Gi~v~~~~~~~iRi~~~ 373 (395)
T 3nx3_A 352 KCQENALLLISCGENDLRFLPP 373 (395)
T ss_dssp HHHHTTEECEEETTTEEEECCC
T ss_pred HHHHCCCEEecCCCCEEEEECC
Confidence 8888899988643 6888643
No 126
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.12 E-value=1.4e-09 Score=105.27 Aligned_cols=239 Identities=12% Similarity=0.094 Sum_probs=147.9
Q ss_pred ceeeec-cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669 32 GIELIA-SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN 109 (337)
Q Consensus 32 ~i~l~a-sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN 109 (337)
.+.|-. +....+|.|++++...+.+. .++|...+..+.. ..+....+++.+++++|++. .+|.+++| +.|+
T Consensus 19 ~~~Ld~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~ 91 (432)
T 3a9z_A 19 KVYMDYNATTPLEPEVIQAVTEAMKEA--WGNPSSSYVAGRK-AKDIINTARASLAKMIGGKP----QDIIFTSGGTESN 91 (432)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHC--CSCTTCSSHHHHH-HHHHHHHHHHHHHHHHTCCG----GGEEEESCHHHHH
T ss_pred cEEeeCCccCCCCHHHHHHHHHHHHHh--cCCCccCcHHHHH-HHHHHHHHHHHHHHHcCCCc----CeEEEeCChHHHH
Confidence 344433 33467999999998776542 3666654433322 23444556689999999874 35778777 7887
Q ss_pred HHHHHhhC----------C-------------------------------------c--------------------ccc
Q psy10669 110 FAVCEKAL----------P-------------------------------------T--------------------NNA 122 (337)
Q Consensus 110 ~~v~~aLl----------~-------------------------------------~--------------------~~a 122 (337)
..++.+++ . . +.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~ 171 (432)
T 3a9z_A 92 NLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAA 171 (432)
T ss_dssp HHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHT
T ss_pred HHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHh
Confidence 66666553 1 0 001
Q ss_pred ---cccEEEEcCccc--ccccChHHHHHHhhhcC----------CeEEEeccccccccc---------eeeeec-c----
Q psy10669 123 ---RFDFLSSGTTCY--SRCLDYARFRQICDETD----------SIMFADMSHISGLIA---------GVKGVT-K---- 173 (337)
Q Consensus 123 ---~pklII~~~S~~--~~~~d~~~l~eia~~~g----------a~l~vD~AH~~Gli~---------g~~~T~-~---- 173 (337)
++++|++....+ +...|+++|.++|+++| +++++|++|..|... .++++. |
T Consensus 172 i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g~ 251 (432)
T 3a9z_A 172 VRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGP 251 (432)
T ss_dssp CCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTCC
T ss_pred ccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhHhcCC
Confidence 267787764333 68899999999999999 999999999888654 123333 3
Q ss_pred CCchhhh--hH-HHHHhhccC------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEE
Q psy10669 174 TGEKILY--DY-EEKINNAVF------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHV 243 (337)
Q Consensus 174 ~Gg~i~~--~l-~~~i~~~~~------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v 243 (337)
..|+++. ++ ...+.+..+ ....++++++.++++..++..+. ..+++.++++.++.++|.+.|.+ .|+++
T Consensus 252 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 330 (432)
T 3a9z_A 252 RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVS-ENCETYEAHMRDIRDYLEERLEAEFGKRI 330 (432)
T ss_dssp SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHGGGE
T ss_pred cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHhccCCcE
Confidence 2344443 22 112221111 01236788889988888887764 35678899999999999999988 47665
Q ss_pred ec-CC-----CCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 244 VT-GG-----TDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 244 ~~-~~-----t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.. +. .-.+++.+.+...+.++.++.+.| .||.++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~ 371 (432)
T 3a9z_A 331 HLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASV 371 (432)
T ss_dssp EESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBS
T ss_pred EEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEec
Confidence 41 11 112355566654333454444444 2555544
No 127
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.11 E-value=2.7e-09 Score=105.87 Aligned_cols=208 Identities=10% Similarity=0.007 Sum_probs=128.2
Q ss_pred cCccchHHHHHHHHHHHHHhhcCCCCCC------CcceeecCCCchhHHHHHHhhC--------------------Cc--
Q psy10669 68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQ------WGCNVQPYSGSPANFAVCEKAL--------------------PT-- 119 (337)
Q Consensus 68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~------~~~~v~~~Sgt~AN~~v~~aLl--------------------~~-- 119 (337)
|.......++|..+.+.++++||.+... ++..+..++||+||+..+.+.. ++
T Consensus 105 ~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~ 184 (475)
T 3k40_A 105 WIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLV 184 (475)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEE
T ss_pred ccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeE
Confidence 3444566789998889999999987520 1124556677999977666541 00
Q ss_pred -----------------------------------cc--c---------cccEEEEcC--cccccccChHHHHHHhhhcC
Q psy10669 120 -----------------------------------NN--A---------RFDFLSSGT--TCYSRCLDYARFRQICDETD 151 (337)
Q Consensus 120 -----------------------------------~~--a---------~pklII~~~--S~~~~~~d~~~l~eia~~~g 151 (337)
.+ + .|.+|+++. +..+..-|+++|.++|+++|
T Consensus 185 vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~ 264 (475)
T 3k40_A 185 GYCSDQAHSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHN 264 (475)
T ss_dssp EEEETTSCHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTT
T ss_pred EEECCCchHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhC
Confidence 00 0 045566553 33568889999999999999
Q ss_pred CeEEEeccccccccc---------e------eeeeccC------C-chhh-h--h-HHHHHhh---ccCC----------
Q psy10669 152 SIMFADMSHISGLIA---------G------VKGVTKT------G-EKIL-Y--D-YEEKINN---AVFP---------- 192 (337)
Q Consensus 152 a~l~vD~AH~~Gli~---------g------~~~T~~~------G-g~i~-~--~-l~~~i~~---~~~p---------- 192 (337)
++++||+||+.|.+. | ++++.|| | |.++ . + +.+.+.. .++.
T Consensus 265 ~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 344 (475)
T 3k40_A 265 LWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYR 344 (475)
T ss_dssp CEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-----------------------
T ss_pred CeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcc
Confidence 999999999987542 1 2233222 2 3332 2 1 2221110 0000
Q ss_pred --CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669 193 --SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 193 --~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
.+.++-. ....++..++..+....++++.++..+++++|++.|.+. |++++.. ....++.+.+...+....++.+
T Consensus 345 ~~~~~~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~-~~~~iv~f~~~~~~~~~~~l~~ 422 (475)
T 3k40_A 345 HWQIPLGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAE-INMGLVCFRLKGSNERNEALLK 422 (475)
T ss_dssp ----CCCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC-CBTTEEEEEESSCHHHHHHHHH
T ss_pred cccccCCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEeCCchHHHHHHHH
Confidence 0111111 234556666666655667899999999999999999995 9999853 4567777777543334566777
Q ss_pred HHhhcCce
Q psy10669 270 VLEEIAIA 277 (337)
Q Consensus 270 ~L~~~gI~ 277 (337)
.|.+.|+.
T Consensus 423 ~L~~~g~~ 430 (475)
T 3k40_A 423 RINGRGHI 430 (475)
T ss_dssp HHHHHTSC
T ss_pred HHHhCCcE
Confidence 77765653
No 128
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.11 E-value=7.3e-09 Score=102.97 Aligned_cols=245 Identities=11% Similarity=0.014 Sum_probs=140.9
Q ss_pred eeeeccCCCC--------CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-C
Q psy10669 33 IELIASENFT--------SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-Y 103 (337)
Q Consensus 33 i~l~asen~~--------~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~ 103 (337)
..-+.+.+|+ +|.|.+++...+.|. +...+.......++|..+++.++++||.+... .+.+ +
T Consensus 95 ~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~------~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~---~~~~t~ 165 (497)
T 2qma_A 95 AIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQ------SMDSWDQASSATYVEQKVVNWLCDKYDLSEKA---DGIFTS 165 (497)
T ss_dssp SCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCC------CTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC---EEEEES
T ss_pred CCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcc------cccchhhChHHHHHHHHHHHHHHHHhCCCCCC---CeEEcC
Confidence 3344555555 677777775443321 22223333456789999899999999986422 4555 4
Q ss_pred CCchhHHHHHHhh----C-----------------Cc-----------------------------------------cc
Q psy10669 104 SGSPANFAVCEKA----L-----------------PT-----------------------------------------NN 121 (337)
Q Consensus 104 Sgt~AN~~v~~aL----l-----------------~~-----------------------------------------~~ 121 (337)
+||.||..++.+. + ++ .+
T Consensus 166 ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L 245 (497)
T 2qma_A 166 GGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKL 245 (497)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGH
T ss_pred CchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHH
Confidence 5588987766652 1 11 00
Q ss_pred c-----c------ccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc--------e------eeeeccC
Q psy10669 122 A-----R------FDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------G------VKGVTKT 174 (337)
Q Consensus 122 a-----~------pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g------~~~T~~~ 174 (337)
. . |.+|+++... .+...|+++|.++|+++|++++||+||+.|.+. + ++++.||
T Consensus 246 ~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK 325 (497)
T 2qma_A 246 DEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHK 325 (497)
T ss_dssp HHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTT
T ss_pred HHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchh
Confidence 0 0 2256664222 468899999999999999999999999987653 1 2333343
Q ss_pred ------C-chhh-h--hHHHHHhhccCCCCCC----CCcHHH----------HHHHHHHHHHHhchhhHHHHHHHHHHHH
Q psy10669 175 ------G-EKIL-Y--DYEEKINNAVFPSLQG----GPHNHA----------IGAIATAMLQAQSDEFKSYQAQVKANAS 230 (337)
Q Consensus 175 ------G-g~i~-~--~l~~~i~~~~~p~~~g----~~~~~~----------iaala~a~~e~~~~~~~~y~~~v~~na~ 230 (337)
| |+++ . .+.+.+... -+++.+ .+++.. ..++..++..+....++++.+++.++++
T Consensus 326 ~l~~p~~~G~l~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~ 404 (497)
T 2qma_A 326 LFYQTISCGALLVNDKSNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTL 404 (497)
T ss_dssp TTCCCSSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ccCCCcceEEEEEeCHHHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 1 3333 2 121222110 011111 122111 1123334544434556788999999999
Q ss_pred HHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcc----hHHHHHHHhhcCceeccCc------ccchhh
Q psy10669 231 HLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLT----GSKVELVLEEIAIACNKNT------GISLAA 288 (337)
Q Consensus 231 ~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~----~~~~~~~L~~~gI~v~~~~------girig~ 288 (337)
+|.+.|.+ .|++++.. ....++.+.+...+.. ..++.+.|.+.|+.+...+ .+||+.
T Consensus 405 ~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~ 472 (497)
T 2qma_A 405 EVADMIRTNDQFELLAE-PSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTI 472 (497)
T ss_dssp HHHHHHHTCTTEEECSC-CSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEEC
T ss_pred HHHHHHhhCCCeEEEcC-CCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEe
Confidence 99999998 49998742 4556777776543322 1345566666788875321 578764
No 129
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.10 E-value=9.7e-09 Score=98.76 Aligned_cols=247 Identities=13% Similarity=0.064 Sum_probs=147.1
Q ss_pred ccceeeeccCC-----CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669 30 INGIELIASEN-----FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen-----~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S 104 (337)
+..|.|...++ -.+|.+.+++...+.+.. .+ |.......+++....+.+.+.+|...+ . .+|.+++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~l~~~~g~~~~-~-~~v~~t~ 108 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NY------YGDSEGLPELRKAIVEREKRKNGVDIT-P-DDVRVTA 108 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCC-G-GGEEEES
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHhcCCCCC-H-HHEEEcC
Confidence 45667766666 247899999987654321 11 222222345554333444444443211 0 2466666
Q ss_pred C-chhHHHHHHhhCCc-------------------------------c----------c----c-cccEEEEc-Ccc-cc
Q psy10669 105 G-SPANFAVCEKALPT-------------------------------N----------N----A-RFDFLSSG-TTC-YS 135 (337)
Q Consensus 105 g-t~AN~~v~~aLl~~-------------------------------~----------~----a-~pklII~~-~S~-~~ 135 (337)
| +.|+..++.+++++ . + . ++++|++. .++ .+
T Consensus 109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 188 (406)
T 1xi9_A 109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTG 188 (406)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCC
Confidence 6 78998888888654 0 0 0 25766665 222 24
Q ss_pred cccC---hHHHHHHhhhcCCeEEEeccccccccc-----------e----eeeec-c----CC---chhh--h------h
Q psy10669 136 RCLD---YARFRQICDETDSIMFADMSHISGLIA-----------G----VKGVT-K----TG---EKIL--Y------D 181 (337)
Q Consensus 136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g----~~~T~-~----~G---g~i~--~------~ 181 (337)
...+ +++|.++|+++|+++++|++|..+..+ + ++++. | .| |+++ . +
T Consensus 189 ~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (406)
T 1xi9_A 189 ALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE 268 (406)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred CCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHH
Confidence 5444 778889999999999999999764431 1 12232 2 12 5554 2 3
Q ss_pred HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC
Q psy10669 182 YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN 260 (337)
Q Consensus 182 l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~ 260 (337)
+.+.+....... .++++...+++..++... ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++.+...
T Consensus 269 l~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~ 344 (406)
T 1xi9_A 269 VREAIDRLARIR--LCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP-QGAFYIFPKIEVG 344 (406)
T ss_dssp HHHHHHHHHHHT--CCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC-CBSSEECCEECSC
T ss_pred HHHHHHHHHHhh--cCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC-CeeEEEEEecCcc
Confidence 455554322222 356666777776666433 2335677889999999999999886 8877642 2344555566532
Q ss_pred -CcchHHHHHHHh-hcCceeccCc--------ccchhhh
Q psy10669 261 -KLTGSKVELVLE-EIAIACNKNT--------GISLAAE 289 (337)
Q Consensus 261 -~~~~~~~~~~L~-~~gI~v~~~~--------girig~~ 289 (337)
+.+..++.+.|. +.||.+.+.. .+||+..
T Consensus 345 ~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~ 383 (406)
T 1xi9_A 345 PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 383 (406)
T ss_dssp SCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec
Confidence 346777777775 7899987532 5677643
No 130
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.10 E-value=7.5e-09 Score=100.18 Aligned_cols=262 Identities=10% Similarity=0.022 Sum_probs=156.2
Q ss_pred hhhhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHh
Q psy10669 10 TLAQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLK 87 (337)
Q Consensus 10 ~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~ 87 (337)
.+...++.++..+.+... +...|.|...++- .+|.|.+++...+.. +.. +...|....-..+++....+.+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~~~y~~~~g~~~l~~~la~~l~~ 92 (429)
T 1yiz_A 18 RYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANS-PDP---LANQYTRGFGHPRLVQALSKLYSQ 92 (429)
T ss_dssp SCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTC-SCG---GGGSCCCSSCCHHHHHHHHHHHHH
T ss_pred HhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhc-ccc---CccCCCCCCCcHHHHHHHHHHHHH
Confidence 345556666666654332 3456777666553 379999999876543 110 111121111123454333345556
Q ss_pred hcCCC-CCCCcceeecCCC-chhHHHHHHhhCCc--------------------------------c---------c--c
Q psy10669 88 AFNLD-PEQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------N---------N--A 122 (337)
Q Consensus 88 lfg~~-~~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------~---------~--a 122 (337)
.+|.+ .+++ +|.+++| ++|+..++.+++++ . . .
T Consensus 93 ~~g~~~~~~~--~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 170 (429)
T 1yiz_A 93 LVDRTINPMT--EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVL 170 (429)
T ss_dssp HHTSCCCTTT--SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBC
T ss_pred HhCCCCCCcC--CEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCccc
Confidence 66743 2221 4667666 78988888888654 1 0 0
Q ss_pred -----------cccEEEEcCccc--cccc---ChHHHHHHhhhcCCeEEEeccccccccc-----------------eee
Q psy10669 123 -----------RFDFLSSGTTCY--SRCL---DYARFRQICDETDSIMFADMSHISGLIA-----------------GVK 169 (337)
Q Consensus 123 -----------~pklII~~~S~~--~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~ 169 (337)
++++|++..-.+ +... ++++|.++|+++|+++++|++|...... .+.
T Consensus 171 d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 250 (429)
T 1yiz_A 171 DNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI 250 (429)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEE
T ss_pred CHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEE
Confidence 156677642222 4555 4778889999999999999999842221 112
Q ss_pred eec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH-----Hh-chhhHHHHHHHHHHHHHHH
Q psy10669 170 GVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ-----AQ-SDEFKSYQAQVKANASHLS 233 (337)
Q Consensus 170 ~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e-----~~-~~~~~~y~~~v~~na~~l~ 233 (337)
++. | .| |+++. ++.+.+..... ....+.+++..+++..++.. .. ....++.++++.++.++|.
T Consensus 251 ~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (429)
T 1yiz_A 251 GSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQ-NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMA 329 (429)
T ss_dssp EEHHHHHTCGGGCCEEEESCHHHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred ecchhccCCCCcceEEEEeCHHHHHHHHHHHh-hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHH
Confidence 232 2 12 55554 46555554311 12235667777777777766 21 2335677888999999999
Q ss_pred HHHHhCCCEEecCCCCCeEEEEEecCCC-----------cchHHHHHHH-hhcCceecc
Q psy10669 234 DEMIKRGYHVVTGGTDVHLILIDLRKNK-----------LTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 234 ~~L~~~G~~v~~~~t~~h~v~V~~~~~~-----------~~~~~~~~~L-~~~gI~v~~ 280 (337)
+.|.+.|+++... ..+..+++++.... .+..++.+.| ++.||.+.+
T Consensus 330 ~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~ 387 (429)
T 1yiz_A 330 SFLAEVGMNPTVP-QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP 387 (429)
T ss_dssp HHHHHHTCEEEEC-SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBC
T ss_pred HHHHhCCCcccCC-CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeC
Confidence 9999889988752 34567888886531 3456666666 478999875
No 131
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.09 E-value=2.2e-09 Score=106.67 Aligned_cols=217 Identities=11% Similarity=0.048 Sum_probs=132.8
Q ss_pred CccchHHHHHHHHHHHHHhhcCCCCCCC-------cceeecCCCchhHHHHHHhhC--------------------Cc--
Q psy10669 69 GGNQFIDEIEIVAQQRSLKAFNLDPEQW-------GCNVQPYSGSPANFAVCEKAL--------------------PT-- 119 (337)
Q Consensus 69 ~G~~~~~~lE~~~~~~~a~lfg~~~~~~-------~~~v~~~Sgt~AN~~v~~aLl--------------------~~-- 119 (337)
.......++|..+.+.++++||.+...+ |..+..++||.||+..+.+.. ++
T Consensus 111 ~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~ 190 (481)
T 4e1o_A 111 ASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLV 190 (481)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEE
T ss_pred CCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeE
Confidence 3345567899888889999999875311 123556677999987666541 11
Q ss_pred --------------------------------------ccc------c---ccEEEEcC--cccccccChHHHHHHhhhc
Q psy10669 120 --------------------------------------NNA------R---FDFLSSGT--TCYSRCLDYARFRQICDET 150 (337)
Q Consensus 120 --------------------------------------~~a------~---pklII~~~--S~~~~~~d~~~l~eia~~~ 150 (337)
+.+ + |.+|+++. +..+..-|+++|.++|+++
T Consensus 191 v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~ 270 (481)
T 4e1o_A 191 AYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICARE 270 (481)
T ss_dssp EEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred EEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHc
Confidence 000 1 56566652 3346778999999999999
Q ss_pred CCeEEEeccccccccc---------e------eeeeccC------C-chh-hhh--H-HHHHh---hccCC---------
Q psy10669 151 DSIMFADMSHISGLIA---------G------VKGVTKT------G-EKI-LYD--Y-EEKIN---NAVFP--------- 192 (337)
Q Consensus 151 ga~l~vD~AH~~Gli~---------g------~~~T~~~------G-g~i-~~~--l-~~~i~---~~~~p--------- 192 (337)
|++++||+||+.|.+. | ++++.|| | |++ +.+ + .+.+. ..++.
T Consensus 271 ~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~ 350 (481)
T 4e1o_A 271 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDF 350 (481)
T ss_dssp TCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCG
T ss_pred CCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCc
Confidence 9999999999987542 2 2222222 2 333 332 2 21111 00110
Q ss_pred ---CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669 193 ---SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 193 ---~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~ 268 (337)
.++++-. ....++..++..+....++++.++..+++++|++.|.+. ||+++. ....+++.+.+...+....++.
T Consensus 351 ~~~~~~~~r~-~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~l~ 428 (481)
T 4e1o_A 351 MHWQIPLSRR-FRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPA-KRHLGLVVFRLKGPNSLTENVL 428 (481)
T ss_dssp GGGSSSSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCS-CCCSSEEEEEESSCHHHHHHHH
T ss_pred ccccccCCCC-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCceeEEEEEeCCchHHHHHHH
Confidence 0111211 133455555555545567889999999999999999985 999975 3467788887754333456677
Q ss_pred HHHhhcC-ceeccCc-----ccchh
Q psy10669 269 LVLEEIA-IACNKNT-----GISLA 287 (337)
Q Consensus 269 ~~L~~~g-I~v~~~~-----girig 287 (337)
+.|.+.| +.+.+-. -+|++
T Consensus 429 ~~L~~~g~~~~~~~~~~g~~~lR~~ 453 (481)
T 4e1o_A 429 KEIAKAGRLFLIPATIQDKLIIRFT 453 (481)
T ss_dssp HHHHHHCSSBCEEEEETTEEEEEEE
T ss_pred HHHHhCCeEEEEeeEECCEEEEEEE
Confidence 7777666 3433211 57775
No 132
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.09 E-value=1.4e-08 Score=97.33 Aligned_cols=242 Identities=11% Similarity=0.015 Sum_probs=144.3
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S 106 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t 106 (337)
.+.|+|-..++- .+|.|.+++...+......+++... | ..+++....+.+.+.+|.+... ..+|.+++| +
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g---~~~l~~~la~~~~~~~~~~~~~-~~~i~~~~g~~ 95 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGF---G---HPALVKALSCLYGKIYQRQIDP-NEEILVAVGAY 95 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTT---C---CHHHHHHHHHHHHHHHTSCCCT-TTSEEEESHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCC---C---hHHHHHHHHHHHHHHhCCCCCC-CCCEEEeCCcH
Confidence 456777666654 4899999998765432112232211 1 2344433333444555533210 014667666 7
Q ss_pred hhHHHHHHhhCCc------------------------------c---------------c-------c---cccEEEEcC
Q psy10669 107 PANFAVCEKALPT------------------------------N---------------N-------A---RFDFLSSGT 131 (337)
Q Consensus 107 ~AN~~v~~aLl~~------------------------------~---------------~-------a---~pklII~~~ 131 (337)
.|+..++.+++++ . . + ++++|++..
T Consensus 96 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 175 (410)
T 3e2y_A 96 GSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNT 175 (410)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEES
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeC
Confidence 8988888888654 1 0 0 156777652
Q ss_pred ccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC---chhhh-
Q psy10669 132 TCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG---EKILY- 180 (337)
Q Consensus 132 S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G---g~i~~- 180 (337)
-.+ +.. .++++|.++|+++|+++++|++|...... .+..+. | .| |+++.
T Consensus 176 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 255 (410)
T 3e2y_A 176 PHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGP 255 (410)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECC
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEEC
Confidence 232 344 36778889999999999999999753221 112222 2 12 55554
Q ss_pred -hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH------HhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE
Q psy10669 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ------AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI 253 (337)
Q Consensus 181 -~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e------~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v 253 (337)
++.+.+..... ....+++++..++++.++.. ......++.++++.++.++|.+.|.+.|+++... ..+..+
T Consensus 256 ~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~ 333 (410)
T 3e2y_A 256 AHLIKHLQTVQQ-NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVP-DGGYFI 333 (410)
T ss_dssp HHHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBC-SBSSEE
T ss_pred HHHHHHHHHHHH-hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CccEEE
Confidence 46565554322 22335667777777777653 1123457788899999999999999999987653 456677
Q ss_pred EEEecCCC--cch---------HHHHHHHhhcCceecc
Q psy10669 254 LIDLRKNK--LTG---------SKVELVLEEIAIACNK 280 (337)
Q Consensus 254 ~V~~~~~~--~~~---------~~~~~~L~~~gI~v~~ 280 (337)
++++.... ++. ..+...|+++||.+.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 371 (410)
T 3e2y_A 334 IADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIP 371 (410)
T ss_dssp EEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEE
T ss_pred EEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeC
Confidence 78876422 221 3444566778999876
No 133
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.09 E-value=6.2e-09 Score=98.68 Aligned_cols=197 Identities=10% Similarity=0.039 Sum_probs=125.2
Q ss_pred HHHHhhcC-CCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669 83 QRSLKAFN-LDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------------------- 119 (337)
Q Consensus 83 ~~~a~lfg-~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------------------- 119 (337)
+.++++++ .+. .++.+++| +.|+..++.+++++
T Consensus 70 ~~la~~~~~~~~----~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 145 (375)
T 3op7_A 70 KSVSQLYTGVKP----EQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLE 145 (375)
T ss_dssp HHHHTTSSSCCG----GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHH
T ss_pred HHHHHHhccCCh----hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHH
Confidence 57778874 443 24555555 89999999999764
Q ss_pred --cc---ccccEEEEcCcc--cccccC---hHHHHHHhhhcCCeEEEeccccccccc------------eeeeec-c---
Q psy10669 120 --NN---ARFDFLSSGTTC--YSRCLD---YARFRQICDETDSIMFADMSHISGLIA------------GVKGVT-K--- 173 (337)
Q Consensus 120 --~~---a~pklII~~~S~--~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~-~--- 173 (337)
+. .++++|++.... .+...| +++|.++|+++|+++++|++|..+... .+++|. |
T Consensus 146 ~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 225 (375)
T 3op7_A 146 KLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYS 225 (375)
T ss_dssp HHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSS
T ss_pred HHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcC
Confidence 00 026787776322 357778 788889999999999999999863332 123332 2
Q ss_pred ----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecC
Q psy10669 174 ----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTG 246 (337)
Q Consensus 174 ----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~ 246 (337)
.+|+++. ++.+.+.....+... ++++...++...++... +...+..++++.++.++|.+.|.+ .|+.+...
T Consensus 226 ~~G~r~G~v~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 303 (375)
T 3op7_A 226 LPGIRIGWVAANHQVTDILRDYRDYTMI-CAGVFDDLVAQLALAHY-QEILERNRHILEENLAILDQWIEEEPLVSYIRP 303 (375)
T ss_dssp CGGGCCEEEECCHHHHHHHTTTGGGTTS-CCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCC
T ss_pred CcccceEEEEeCHHHHHHHHHHHhhhcc-CCCcHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC
Confidence 1266655 577776654333333 34445555555555543 233466777889999999999998 47776642
Q ss_pred CCCCeEEEEEecCCCcchHHHHHHH-hhcCceeccCc------ccchh
Q psy10669 247 GTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNKNT------GISLA 287 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~~------girig 287 (337)
.....+++.+.. +.+..++...| ++.||.+.+.. .+||+
T Consensus 304 -~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~ 349 (375)
T 3op7_A 304 -AVVSTSFVKIAV-DMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLG 349 (375)
T ss_dssp -SSSSCEEEEECC-SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEC
T ss_pred -CCeEEEeEEcCC-CCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEE
Confidence 334455666654 34666666665 67899987632 56765
No 134
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.09 E-value=3.4e-09 Score=98.89 Aligned_cols=185 Identities=14% Similarity=0.061 Sum_probs=120.0
Q ss_pred HHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------cc--
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------NN-- 121 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------~~-- 121 (337)
++++++++|.++ .+.++||+.|+..++.+++++ .+
T Consensus 4 ~~~la~~~g~~~-----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~ 78 (331)
T 1pff_A 4 EGKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEK 78 (331)
T ss_dssp HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHH
T ss_pred HHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHH
Confidence 467888998873 688889988888888887653 00
Q ss_pred c---cccEEEEcCcc--cccccChHHHHHHhhh-cCCeEEEeccccccccc--------eeeeec-c-----C---Cchh
Q psy10669 122 A---RFDFLSSGTTC--YSRCLDYARFRQICDE-TDSIMFADMSHISGLIA--------GVKGVT-K-----T---GEKI 178 (337)
Q Consensus 122 a---~pklII~~~S~--~~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~--------g~~~T~-~-----~---Gg~i 178 (337)
+ ++++|++..-+ .+...|+++|.++|++ +|+++++|++|..|... .++++. | . +|++
T Consensus 79 ~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~ 158 (331)
T 1pff_A 79 HLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLV 158 (331)
T ss_dssp TCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEE
T ss_pred hhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEE
Confidence 1 25777775322 3688899999999999 99999999999988643 133333 2 1 4566
Q ss_pred hh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---------------C
Q psy10669 179 LY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---------------G 240 (337)
Q Consensus 179 ~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---------------G 240 (337)
+. ++.+.+.+...++..+++++...+++..++.. .+...++..+|++.+.+.|.+. |
T Consensus 159 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~ 233 (331)
T 1pff_A 159 CSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPG 233 (331)
T ss_dssp EECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTT
T ss_pred EeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 54 46667766544313345555544443344432 2445667778888888888763 2
Q ss_pred CEEecC--CCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 241 YHVVTG--GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 241 ~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
+++... ....+++.+.+. +...+.+.|++.||.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~~ 271 (331)
T 1pff_A 234 HEIAKKQMKMFGSMIAFDVD----GLEKAKKVLDNCHVVSLA 271 (331)
T ss_dssp HHHHHHHCSSCCSEEEEECS----SHHHHHHHHHTCSSSEEC
T ss_pred HHHHHhhCCCCceEEEEEEC----CHHHHHHHHHhCCCceec
Confidence 222210 123557777664 467788999999998764
No 135
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.09 E-value=1.2e-08 Score=95.56 Aligned_cols=232 Identities=11% Similarity=0.088 Sum_probs=150.7
Q ss_pred cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC---CCCCCCcceeecCCC
Q psy10669 31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN---LDPEQWGCNVQPYSG 105 (337)
Q Consensus 31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg---~~~~~~~~~v~~~Sg 105 (337)
..|.|-..+|- .+|.|.+++...+......+++. ....+++ +.++++++ .+. .+|.+++|
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~lr----~~la~~~~~~~~~~----~~v~~~~G 84 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-------SPDEELI----EKILSYLDTDFLSK----NNVSVGNG 84 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-------SSCHHHH----HHHHHHHTCSSCCG----GGEEEESS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CchHHHH----HHHHHHcCCCCCCH----HHEEEcCC
Confidence 45777777773 48999999987652211112211 1133444 57788998 654 36888888
Q ss_pred -chhHHHHHHhhCC------c------------------------------ccccccEEEE-cCcc-cccccChHHHHHH
Q psy10669 106 -SPANFAVCEKALP------T------------------------------NNARFDFLSS-GTTC-YSRCLDYARFRQI 146 (337)
Q Consensus 106 -t~AN~~v~~aLl~------~------------------------------~~a~pklII~-~~S~-~~~~~d~~~l~ei 146 (337)
+.|+..++.++ + + .+.++++|++ .+.+ .+...|.+++.+|
T Consensus 85 ~~~al~~~~~~~-gd~Vl~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~v~l~~p~nptG~~~~~~~l~~l 163 (335)
T 1uu1_A 85 ADEIIYVMMLMF-DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERI 163 (335)
T ss_dssp HHHHHHHHHHHS-SEEEECSSSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCCCTTEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred hHHHHHHHHHHh-CCcEEECCCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHcCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 57776666665 2 2 1112677774 4433 3588899999999
Q ss_pred hhhcCCeEEEecccccc----ccc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHH
Q psy10669 147 CDETDSIMFADMSHISG----LIA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIG 204 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~G----li~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~ia 204 (337)
++..| ++++|++|... .+. .+.+|. | .| |+++. ++.+.+.....+ .+++++..+
T Consensus 164 ~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~---~~~~~~~~~ 239 (335)
T 1uu1_A 164 LKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLP---FNVSYVSQM 239 (335)
T ss_dssp HHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCT---TCSCHHHHH
T ss_pred HHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCC---CCcCHHHHH
Confidence 99889 99999999731 111 122333 2 12 56554 566666654433 267777777
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-c
Q psy10669 205 AIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-G 283 (337)
Q Consensus 205 ala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-g 283 (337)
++..++... ...++.++++.++.++|.+.|.+.|+++.. .....+++.+.. .+..++.+.|.+.||.+.+.. .
T Consensus 240 ~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~~~~ 313 (335)
T 1uu1_A 240 FAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITD--SRGNFVFVFMEK--EEKERLLEHLRTKNVAVRSFREG 313 (335)
T ss_dssp HHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CCSSEEEEECCT--HHHHHHHHHHHHHTEEEEEETTE
T ss_pred HHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCCcEEcC--CCCeEEEEECCC--CCHHHHHHHHHHCCEEEEECCCe
Confidence 777666542 345678889999999999999988887754 344567777754 456777788888899998633 6
Q ss_pred cchhh
Q psy10669 284 ISLAA 288 (337)
Q Consensus 284 irig~ 288 (337)
+||+.
T Consensus 314 iRis~ 318 (335)
T 1uu1_A 314 VRITI 318 (335)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88874
No 136
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.07 E-value=8.2e-09 Score=98.68 Aligned_cols=228 Identities=12% Similarity=0.037 Sum_probs=140.3
Q ss_pred CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhhC--
Q psy10669 41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKAL-- 117 (337)
Q Consensus 41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aLl-- 117 (337)
+.+|.|.+++...+. ++. ..+ +.| ......+++ +++++++|.+. -++.+ +||+.|+..++.++.
T Consensus 61 ~~~~~v~~a~~~~~~-~~~--~~~-~~~-~~~~~~~l~----~~la~~~~~~~----~~v~~~~gg~~a~~~al~~~~~~ 127 (395)
T 1vef_A 61 HGNPEVVEAVKRQAE-TLM--AMP-QTL-PTPMRGEFY----RTLTAILPPEL----NRVFPVNSGTEANEAALKFARAH 127 (395)
T ss_dssp BTCHHHHHHHHHHHH-HCC--CCC-TTS-CCHHHHHHH----HHHHHTSCTTE----EEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH-hCC--CCc-ccc-CCHHHHHHH----HHHHHhcCCCc----CEEEEcCcHHHHHHHHHHHHHHH
Confidence 358999999987654 332 222 223 222333444 68889997654 24555 455889887776652
Q ss_pred -Cc-----------------------c------------c-----------c-----cccEEEEcCccc--ccccC----
Q psy10669 118 -PT-----------------------N------------N-----------A-----RFDFLSSGTTCY--SRCLD---- 139 (337)
Q Consensus 118 -~~-----------------------~------------~-----------a-----~pklII~~~S~~--~~~~d---- 139 (337)
++ . . . ++++|++.+... +...|
T Consensus 128 ~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~ 207 (395)
T 1vef_A 128 TGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEF 207 (395)
T ss_dssp HSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHH
T ss_pred hCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHH
Confidence 21 0 0 0 157888875432 45667
Q ss_pred hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc------CCchhhh--hHHHHHhhccCCCCCCC
Q psy10669 140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK------TGEKILY--DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~------~Gg~i~~--~l~~~i~~~~~p~~~g~ 197 (337)
+++|.++|+++|++|++|++|. |+ .+ + +.+.+| ..|+++. ++.+.+....+.. ..+
T Consensus 208 l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g~~~G~~~~~~~~~~~l~~~~~~~-~~~ 285 (395)
T 1vef_A 208 LRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPKGGHGT-TFG 285 (395)
T ss_dssp HHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCC-SST
T ss_pred HHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEEEEcccccCCCceEEEEehHHHHhhhccCCcCC-CcC
Confidence 8999999999999999999999 43 11 1 122222 1244433 4555554421111 224
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHHHHh-hcC
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVELVLE-EIA 275 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~L~-~~g 275 (337)
+++...++...++..+.+ .++.+++.++.++|.+.|.+.+.++.. .....+++++++.. +..++.+.|. +.|
T Consensus 286 ~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~---~~~~l~~~l~~~~g 359 (395)
T 1vef_A 286 GNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE---KAAPYIARLEKEHR 359 (395)
T ss_dssp TCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS---CSHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC---hHHHHHHHHHHHCC
Confidence 566777777777766532 457888999999999999987653221 11244677888764 2566777777 789
Q ss_pred ceeccCc--ccchhhh
Q psy10669 276 IACNKNT--GISLAAE 289 (337)
Q Consensus 276 I~v~~~~--girig~~ 289 (337)
|.+.+.. .+||+..
T Consensus 360 i~v~~~~~~~iRi~~~ 375 (395)
T 1vef_A 360 VLALQAGPTVIRFLPP 375 (395)
T ss_dssp EECEESSTTEEEECCC
T ss_pred eEEecCCCCEEEEeCC
Confidence 9998642 6888643
No 137
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.06 E-value=4.6e-09 Score=98.30 Aligned_cols=222 Identities=13% Similarity=0.066 Sum_probs=133.2
Q ss_pred CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhHHHHHHhhCCc
Q psy10669 41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPANFAVCEKALPT 119 (337)
Q Consensus 41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN~~v~~aLl~~ 119 (337)
..+|.|++++...+. .|..+. |. .++...+++.+++++|.+. .++.+++ |+.|+..++.+++++
T Consensus 25 ~~~~~v~~a~~~~~~-~~~~~~-------g~---~~~~~~~~~~l~~~~g~~~----~~v~~~~g~t~a~~~~~~~~~~~ 89 (359)
T 1svv_A 25 GMHPKILDLMARDNM-TQHAGY-------GQ---DSHCAKAARLIGELLERPD----ADVHFISGGTQTNLIACSLALRP 89 (359)
T ss_dssp CCCHHHHHHHHHHTT-CCCCST-------TC---SHHHHHHHHHHHHHHTCTT----SEEEEESCHHHHHHHHHHHHCCT
T ss_pred CCCHHHHHHHHHHHh-hccccc-------cc---cHHHHHHHHHHHHHhCCCC----ccEEEeCCchHHHHHHHHHHhCC
Confidence 458999999987643 342211 22 2333344568889999775 2566655 488998888988654
Q ss_pred ------------------------------------------cc---cc-------ccEEEEcCcc-cccccC---hHHH
Q psy10669 120 ------------------------------------------NN---AR-------FDFLSSGTTC-YSRCLD---YARF 143 (337)
Q Consensus 120 ------------------------------------------~~---a~-------pklII~~~S~-~~~~~d---~~~l 143 (337)
+. .+ +++|++...+ .+...| +++|
T Consensus 90 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i 169 (359)
T 1svv_A 90 WEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDI 169 (359)
T ss_dssp TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHH
T ss_pred CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHH
Confidence 00 01 5677775432 356666 7788
Q ss_pred HHHhhhcCCeEEEeccc---cccccc-------------eeeeeccC-C-----chhhh--hHHHHHhhcc--CCCCCCC
Q psy10669 144 RQICDETDSIMFADMSH---ISGLIA-------------GVKGVTKT-G-----EKILY--DYEEKINNAV--FPSLQGG 197 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH---~~Gli~-------------g~~~T~~~-G-----g~i~~--~l~~~i~~~~--~p~~~g~ 197 (337)
.++|+++|+++++|++| ..|.++ .++++++| | |+++. ++.+.+.+.. .+.+.+
T Consensus 170 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~- 248 (359)
T 1svv_A 170 SASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMA- 248 (359)
T ss_dssp HHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHHHHHTTCCCT-
T ss_pred HHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHHHHHHHhcCCcccc-
Confidence 89999999999999999 555543 12333333 2 33332 3433333221 122222
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc-Cc
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI-AI 276 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~-gI 276 (337)
...+..++++.. +.+..+++.++++.++.++|.+.|...|+++... ...+.+++++. .++.+.|.+. ||
T Consensus 249 ~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~------~~~~~~l~~~~gi 318 (359)
T 1svv_A 249 KGWLLGIQFEVL---MKDNLFFELGAHSNKMAAILKAGLEACGIRLAWP-SASNQLFPILE------NTMIAELNNDFDM 318 (359)
T ss_dssp TTHHHHHHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC-CSSSEECBEEE------HHHHHHHTTTEEC
T ss_pred cchhhHHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHhccCCeEEccC-CccceEEEEcC------HHHHHHHHHhcCE
Confidence 122333333222 2223457888999999999999996689888742 44566666553 3556666665 99
Q ss_pred eeccC-----cccchhh
Q psy10669 277 ACNKN-----TGISLAA 288 (337)
Q Consensus 277 ~v~~~-----~girig~ 288 (337)
.+... ..|||+.
T Consensus 319 ~v~~~~~~~~~~iRi~~ 335 (359)
T 1svv_A 319 YTVEPLKDGTCIMRLCT 335 (359)
T ss_dssp EEEEEETTTEEEEEEEC
T ss_pred EEEecccCCCceEEEEc
Confidence 98431 1678863
No 138
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.06 E-value=1e-08 Score=97.00 Aligned_cols=222 Identities=13% Similarity=0.071 Sum_probs=141.4
Q ss_pred cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669 31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP 107 (337)
Q Consensus 31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~ 107 (337)
..|.|...+|- .+|.|.+++...+... .+++. ....+++ +.+++++|.+. .+|.+++| +.
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l~----~~la~~~~~~~----~~v~~~~g~~~ 87 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCI--ERYPD-------ADYFHLH----QALARHHQVPA----SWILAGNGETE 87 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGG--GSCCC-------TTCHHHH----HHHHHHHTSCG----GGEEEESSHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHh--hcCCC-------CCHHHHH----HHHHHHHCcCH----HHEEECCCHHH
Confidence 45777666654 4899999998765321 12221 1123444 57788999875 25778777 67
Q ss_pred hHHHHHHhhCCc------------------------------c------cc--------cccEEEE-cCcc-cccccC--
Q psy10669 108 ANFAVCEKALPT------------------------------N------NA--------RFDFLSS-GTTC-YSRCLD-- 139 (337)
Q Consensus 108 AN~~v~~aLl~~------------------------------~------~a--------~pklII~-~~S~-~~~~~d-- 139 (337)
|+..++.++ ++ . +. ++++|++ .+.+ .+...|
T Consensus 88 al~~~~~~~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~ 166 (364)
T 1lc5_A 88 SIFTVASGL-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERP 166 (364)
T ss_dssp HHHHHHHHH-CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHc-CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence 877777777 32 1 11 2576665 3432 356677
Q ss_pred -hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c----CC---chhh-h--hHHHHHhhccCCC
Q psy10669 140 -YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKIL-Y--DYEEKINNAVFPS 193 (337)
Q Consensus 140 -~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~-~--~l~~~i~~~~~p~ 193 (337)
+++|.++|+++|+++++|++|..+... .+.++. | .| |+++ . ++.+.+.....+
T Consensus 167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~- 245 (364)
T 1lc5_A 167 LLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP- 245 (364)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCT-
T ss_pred HHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCC-
Confidence 777889999999999999999854321 122332 2 13 6666 4 566666654333
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~ 272 (337)
.++++...+++..++.. ....++.++++.++.++|.+.|.+. |+++.. .....+++.+.. +..++.+.|.
T Consensus 246 --~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~g~~~~~~~~~---~~~~l~~~l~ 316 (364)
T 1lc5_A 246 --WSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYP--GRANYLLLRCER---EDIDLQRRLL 316 (364)
T ss_dssp --TCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC--CSSSEEEEEESC---TTCCHHHHHH
T ss_pred --CCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECC--CCCeEEEEECCC---cHHHHHHHHH
Confidence 25666666666555533 1234677788889999999999886 888764 445566777753 2345667777
Q ss_pred hcCceecc
Q psy10669 273 EIAIACNK 280 (337)
Q Consensus 273 ~~gI~v~~ 280 (337)
+.||.+.+
T Consensus 317 ~~gi~v~~ 324 (364)
T 1lc5_A 317 TQRILIRS 324 (364)
T ss_dssp TTTEECEE
T ss_pred HCCcEEee
Confidence 77999875
No 139
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.05 E-value=8.6e-09 Score=97.61 Aligned_cols=226 Identities=13% Similarity=0.046 Sum_probs=139.8
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC-
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG- 105 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg- 105 (337)
..|.|...+|.. +|.|.+++...+... .+++.. .| ..++.....+.+.+.+|. +. .+|.+++|
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g---~~~lr~~la~~l~~~~g~~~~~----~~i~~t~g~ 91 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHSL--NIYPKS---AF---EESLRAAQRGFFKRRFKIELKE----NELISTLGS 91 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGGG--GSCCCT---TC---CHHHHHHHHHHHHHHHSCCCCG----GGEEEESSS
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhhc--CCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCH----HHEEECcCc
Confidence 567777777655 799999998765211 122211 12 234443333456666786 33 25666666
Q ss_pred chhHHHHHHhhCCc----------------------------------c------cc-----cccEEEEcCccc--cccc
Q psy10669 106 SPANFAVCEKALPT----------------------------------N------NA-----RFDFLSSGTTCY--SRCL 138 (337)
Q Consensus 106 t~AN~~v~~aLl~~----------------------------------~------~a-----~pklII~~~S~~--~~~~ 138 (337)
++|+..++.+++++ . +. ++++|++..-.+ +...
T Consensus 92 ~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~ 171 (376)
T 3ezs_A 92 REVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTL 171 (376)
T ss_dssp HHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCC
Confidence 68888777887531 1 11 168888752232 4555
Q ss_pred Ch---HHHHHHhhhcCCeEEEeccccccccc---------------------eeeeec-c----CC---chhhh--hHHH
Q psy10669 139 DY---ARFRQICDETDSIMFADMSHISGLIA---------------------GVKGVT-K----TG---EKILY--DYEE 184 (337)
Q Consensus 139 d~---~~l~eia~~~ga~l~vD~AH~~Gli~---------------------g~~~T~-~----~G---g~i~~--~l~~ 184 (337)
|. ++|.++|+++|++|++|++|...... .+.+|. | .| |+++. ++.+
T Consensus 172 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 251 (376)
T 3ezs_A 172 SLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLE 251 (376)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHH
Confidence 64 45566799999999999999864332 112232 2 12 55554 5666
Q ss_pred HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcch
Q psy10669 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG 264 (337)
Q Consensus 185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~ 264 (337)
.+..... ....+++++..+++..++.. ....++.++++.++.+++.+.|. |+. . ...+..+++++. +.
T Consensus 252 ~~~~~~~-~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~-~--~~~~~~~~~~~~----~~ 319 (376)
T 3ezs_A 252 KYKAFRA-YLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL-I--YPYSFYVYLPVQ----NG 319 (376)
T ss_dssp HHHHHHT-TTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC-C--CSBSSEEEEECS----CH
T ss_pred HHHHHHh-hhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC-C--CCcceEEEEECC----CH
Confidence 6665432 22345677777777776654 23457788888889998988887 665 2 245667778775 46
Q ss_pred HHHHHHHhh-cCceecc
Q psy10669 265 SKVELVLEE-IAIACNK 280 (337)
Q Consensus 265 ~~~~~~L~~-~gI~v~~ 280 (337)
.++.+.|.+ .||.+.+
T Consensus 320 ~~~~~~l~~~~gi~v~~ 336 (376)
T 3ezs_A 320 ENFAKTLYQNEGIITLP 336 (376)
T ss_dssp HHHHHHHHHHHCCBCEE
T ss_pred HHHHHHHHHhCCEEEeC
Confidence 677777776 8999875
No 140
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.04 E-value=1.1e-08 Score=99.82 Aligned_cols=208 Identities=11% Similarity=0.045 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh-CCc--------------------------------c
Q psy10669 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA-LPT--------------------------------N 120 (337)
Q Consensus 75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL-l~~--------------------------------~ 120 (337)
.+++...++.+++++|.+. .++.+++| +.++.+++.++ +++ .
T Consensus 107 ~~~~~~~~~~la~~~g~~~----~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~ 182 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGLEI----ANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLP 182 (438)
T ss_dssp HHHHHHHHHHHHHHHTSSE----ECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCc----cceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEc
Confidence 4555566789999999986 45666666 53444444443 111 0
Q ss_pred ----------cc-cccEEEEcCc-ccccccChHHHHHHhhhcCCeEEEecc-ccccccc--------eeeeecc------
Q psy10669 121 ----------NA-RFDFLSSGTT-CYSRCLDYARFRQICDETDSIMFADMS-HISGLIA--------GVKGVTK------ 173 (337)
Q Consensus 121 ----------~a-~pklII~~~S-~~~~~~d~~~l~eia~~~ga~l~vD~A-H~~Gli~--------g~~~T~~------ 173 (337)
+. ++++|++... ..+...|+++|.++|+++|+++++|.. |..|.+. .+++++|
T Consensus 183 ~~~~~~d~~~i~~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~ 262 (438)
T 1wyu_A 183 LEGGRTPLPEVGEEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPM 262 (438)
T ss_dssp CBTTBCCCCCCCTTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCC
T ss_pred CcCCccCHHHhCCCeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCc
Confidence 11 2567777643 346778999999999999999998865 7777754 1233233
Q ss_pred -----CCchhhh--hHHHHHhhcc------CC-----------------CCCCCCcH---HHHHHHHHH--HHHHhchhh
Q psy10669 174 -----TGEKILY--DYEEKINNAV------FP-----------------SLQGGPHN---HAIGAIATA--MLQAQSDEF 218 (337)
Q Consensus 174 -----~Gg~i~~--~l~~~i~~~~------~p-----------------~~~g~~~~---~~iaala~a--~~e~~~~~~ 218 (337)
.+|+++. ++.+.+.... .+ ...++++. +.++++.++ +..+....+
T Consensus 263 ~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~ 342 (438)
T 1wyu_A 263 GFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGL 342 (438)
T ss_dssp GGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHH
Confidence 2355554 3433321100 00 01244444 556666555 555443456
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee--cc-----Ccccchhhh
Q psy10669 219 KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC--NK-----NTGISLAAE 289 (337)
Q Consensus 219 ~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v--~~-----~~girig~~ 289 (337)
++.++++.+++++|.+.|.+. |+++......-+.+.+.+. .+..++.+.|.+.||.+ .. ...|||+..
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~ 418 (438)
T 1wyu_A 343 REVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP---KDPEAVRRALAERGFHGATPVPREYGENLALFAAT 418 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS---SCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCC---CCHHHHHHHHHHCCceeccccccccCCCeEEEEec
Confidence 788999999999999999996 9999763222233344332 36788888888889998 22 126888754
No 141
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.04 E-value=5.5e-08 Score=92.90 Aligned_cols=246 Identities=16% Similarity=0.079 Sum_probs=145.2
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCC-CCCcceeecCCC-
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDP-EQWGCNVQPYSG- 105 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~-~~~~~~v~~~Sg- 105 (337)
...|.|-..++- .+|.|.+++...+.... .+|+.. .| ..++.....+.+.+.+|.+- + -+|.+++|
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g---~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~g~ 100 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAPP---AG---IPELREALAEKFRRENGLSVTP---EETIVTVGG 100 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHHHHHHHHTTCCCCCG---GGEEEESHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCh---HHEEEcCCh
Confidence 455677666663 37899999876653311 122111 12 23444333344555556431 1 24677666
Q ss_pred chhHHHHHHhhCCc-------------------------------c------------cc---cccEEEEc-Ccc-cccc
Q psy10669 106 SPANFAVCEKALPT-------------------------------N------------NA---RFDFLSSG-TTC-YSRC 137 (337)
Q Consensus 106 t~AN~~v~~aLl~~-------------------------------~------------~a---~pklII~~-~S~-~~~~ 137 (337)
++|+..++.+++++ . .+ ++|+|++. +++ .+..
T Consensus 101 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~ 180 (385)
T 1b5p_A 101 SQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAV 180 (385)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCC
Confidence 78888888888754 0 01 15666664 322 2454
Q ss_pred cC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-------CCchhhh--hHHHHHhhcc
Q psy10669 138 LD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--DYEEKINNAV 190 (337)
Q Consensus 138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~ 190 (337)
.+ +++|.++|+++|+++++|++|.-.... .+.+|. | +.|+++. ++.+.+.+..
T Consensus 181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~ 260 (385)
T 1b5p_A 181 YPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVS 260 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHH
Confidence 44 777888999999999999998754331 122333 2 1255554 4666555432
Q ss_pred CCCCCCCCcHHHHHHHHHHHHH---HhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQ---AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV 267 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e---~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~ 267 (337)
.++.. +++.....+...++.. . ....++.++++.++.+++.+.|.+.|+++... ..+..+++++...+.+..++
T Consensus 261 ~~~~~-~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l 337 (385)
T 1b5p_A 261 RQSTT-SPDTIAQWATLEALTNQEAS-RAFVEMAREAYRRRRDLLLEGLTALGLKAVRP-SGAFYVLMDTSPIAPDEVRA 337 (385)
T ss_dssp HTTTC-SCCHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SBTTEEEEECTTTCSSHHHH
T ss_pred hhccC-CCCHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CeeEEEEEecCCCCCCHHHH
Confidence 23222 4445555555555533 2 23346678888889999999998888887642 22334566775445677888
Q ss_pred HHHHhhcCceeccCc------ccchhh
Q psy10669 268 ELVLEEIAIACNKNT------GISLAA 288 (337)
Q Consensus 268 ~~~L~~~gI~v~~~~------girig~ 288 (337)
.+.|.+.||.+.+-. .+||+.
T Consensus 338 ~~~l~~~gv~v~~g~~f~~~~~iRis~ 364 (385)
T 1b5p_A 338 AERLLEAGVAVVPGTDFAAFGHVRLSY 364 (385)
T ss_dssp HHHHHHTTEECEESGGGTCTTEEEEEC
T ss_pred HHHHHHCCeEEecccccCCCCeEEEEe
Confidence 888888899987632 467763
No 142
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.03 E-value=1.1e-08 Score=96.85 Aligned_cols=222 Identities=14% Similarity=0.107 Sum_probs=135.8
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhHHHHHHh---hC
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPANFAVCEK---AL 117 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN~~v~~a---Ll 117 (337)
.+|.+.+++...+. ++ +.++++| . .....++ ++.+++++|.+. ++.+++ |+.|+..++.+ +.
T Consensus 45 ~~~~v~~a~~~~~~-~~--~~~~~~y-~-~~~~~~l----~~~la~~~g~~~-----~v~~~~g~t~a~~~~~~~~~~~~ 110 (375)
T 2eh6_A 45 AYPKLTEALKEQVE-KL--LHVSNLY-E-NPWQEEL----AHKLVKHFWTEG-----KVFFANSGTESVEAAIKLARKYW 110 (375)
T ss_dssp SCHHHHHHHHHHHH-HC--SCCCTTB-C-CHHHHHH----HHHHHHTSSSCE-----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hc--cccCccc-C-CHHHHHH----HHHHHhhcCCCC-----eEEEeCchHHHHHHHHHHHHHHh
Confidence 68999999987654 33 3334443 1 2223334 468889999831 455544 58888776653 23
Q ss_pred -----C-c---------------------c-------------c-------------c---cccEEEEcCccc--ccccC
Q psy10669 118 -----P-T---------------------N-------------N-------------A---RFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 118 -----~-~---------------------~-------------~-------------a---~pklII~~~S~~--~~~~d 139 (337)
+ + . . + ++++|++.+..+ +...|
T Consensus 111 ~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~ 190 (375)
T 2eh6_A 111 RDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEA 190 (375)
T ss_dssp HHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEEC
T ss_pred ccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCC
Confidence 2 2 0 0 0 157888865333 45557
Q ss_pred ----hHHHHHHhhhcCCeEEEecccc-ccccc--------e-----eeeecc------CCchhhh--hHHHHHhhccCCC
Q psy10669 140 ----YARFRQICDETDSIMFADMSHI-SGLIA--------G-----VKGVTK------TGEKILY--DYEEKINNAVFPS 193 (337)
Q Consensus 140 ----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g-----~~~T~~------~Gg~i~~--~l~~~i~~~~~p~ 193 (337)
+++|.++|+++|+++++|++|. .|..+ + ++++ | ..|+++. ++.+.+.+..+..
T Consensus 191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S-K~~~~g~~~G~~~~~~~~~~~~~~~~~~~ 269 (375)
T 2eh6_A 191 SEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA-KGLGGGVPIGAILAREEVAQSFTPGSHGS 269 (375)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC-GGGGTTSCCEEEEEEHHHHTTCCTTSCCC
T ss_pred CHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc-ccccCCCCeEEEEEcHHHHhhhcCCCCCC
Confidence 8899999999999999999999 44322 1 2222 2 1244433 4555554422222
Q ss_pred CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273 (337)
Q Consensus 194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~ 273 (337)
.+++ ++...++...++..+ . ++.+++.++.++|.+.|.+.+..... ....++++++.. +..++.+.|.+
T Consensus 270 ~~~~-~~~~~~~~~~~l~~~-~----~~~~~~~~~~~~l~~~L~~~~~~~~~--~~g~~~~~~~~~---~~~~~~~~l~~ 338 (375)
T 2eh6_A 270 TFGG-NPLACRAGTVVVDEV-E----KLLPHVREVGNYFKEKLKELGKGKVK--GRGLMLGLELER---ECKDYVLKALE 338 (375)
T ss_dssp SSTT-CHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHTTSSEEE--EETTEEEEECSS---CCHHHHHHHHH
T ss_pred CCCC-CHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHHhcCCce--EEEEEEEEEEcC---cHHHHHHHHHH
Confidence 3444 344444444444443 1 67889999999999999987754433 345677888754 35667778878
Q ss_pred cCceeccC--cccchhhh
Q psy10669 274 IAIACNKN--TGISLAAE 289 (337)
Q Consensus 274 ~gI~v~~~--~girig~~ 289 (337)
.||.+.+. ..+||+..
T Consensus 339 ~gi~~~~~~~~~iRi~~~ 356 (375)
T 2eh6_A 339 KGLLINCTAGKVLRFLPP 356 (375)
T ss_dssp TTEECEEETTTEEEECCC
T ss_pred CCCEEecCCCCEEEEECC
Confidence 89998853 26888754
No 143
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.02 E-value=2e-08 Score=95.97 Aligned_cols=239 Identities=9% Similarity=-0.003 Sum_probs=137.1
Q ss_pred cceeeeccCCC--CCHHHHHHHhhhhhhcc---CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecC
Q psy10669 31 NGIELIASENF--TSLAVLECLGSCLQNKY---SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPY 103 (337)
Q Consensus 31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y---~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~ 103 (337)
+.|.|...+.. .+|.|.+++...+.... ..+++. ..|. .++.....+.+.+.+|. +. .+|.++
T Consensus 36 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~---~~g~---~~lr~~la~~l~~~~g~~~~~----~~i~~~ 105 (398)
T 3ele_A 36 NVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS---AQGD---VETRAAIAEFLNNTHGTHFNA----DNLYMT 105 (398)
T ss_dssp GCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC---TTCC---HHHHHHHHHHHHHHHCCCCCG----GGEEEE
T ss_pred CeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC---CCCc---HHHHHHHHHHHHHHhCCCCCh----HHEEEc
Confidence 45666654432 37899999987654310 112211 1222 33443333466666774 33 257777
Q ss_pred CC-chhHHHHHHhhCCc-------------------------------------------c--cc-cccEEEEcCccc--
Q psy10669 104 SG-SPANFAVCEKALPT-------------------------------------------N--NA-RFDFLSSGTTCY-- 134 (337)
Q Consensus 104 Sg-t~AN~~v~~aLl~~-------------------------------------------~--~a-~pklII~~~S~~-- 134 (337)
+| ++|+..++.+++++ + +. ++++|++..-.+
T Consensus 106 ~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~npt 185 (398)
T 3ele_A 106 MGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPS 185 (398)
T ss_dssp SSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTT
T ss_pred cCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCC
Confidence 77 78988888888642 0 00 267777742232
Q ss_pred ccccC---hHHHHHHhhh------cCCeEEEeccccccccc--------------eeeeec-c----CC---chhhh--h
Q psy10669 135 SRCLD---YARFRQICDE------TDSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKILY--D 181 (337)
Q Consensus 135 ~~~~d---~~~l~eia~~------~ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~~--~ 181 (337)
+...| +++|.++|++ +|+++++|++|...... .+++|. | .| |+++. +
T Consensus 186 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 265 (398)
T 3ele_A 186 GTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDE 265 (398)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTT
T ss_pred CCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcch
Confidence 46666 4455588888 89999999999863322 123333 2 12 55543 2
Q ss_pred ------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE
Q psy10669 182 ------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI 255 (337)
Q Consensus 182 ------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V 255 (337)
+.+.+..........+++....++++..+. . ...++++.++.++|.+.|.+.|+++... ..+..+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~---~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~ 338 (398)
T 3ele_A 266 VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG---A---TGDINAYKENRDLLYEGLTRIGYHCFKP-DGAFYMFV 338 (398)
T ss_dssp STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTT---C---CCCHHHHHHHHHHHHHHHHHHTCCEECC-SBSSEEEE
T ss_pred hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhc---C---HHHHHHHHHHHHHHHHHHHHcCCeecCC-CeeEEEEE
Confidence 222222111111122344444444333221 1 1246788889999999999989988753 23444677
Q ss_pred EecCCCcchHHHHHHHhhcCceeccCc------ccchhh
Q psy10669 256 DLRKNKLTGSKVELVLEEIAIACNKNT------GISLAA 288 (337)
Q Consensus 256 ~~~~~~~~~~~~~~~L~~~gI~v~~~~------girig~ 288 (337)
.+.. .+..++.+.|.+.||.+.+.. .+||+.
T Consensus 339 ~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~ 375 (398)
T 3ele_A 339 KALE--DDSNAFCEKAKEEDVLIVAADGFGCPGWVRISY 375 (398)
T ss_dssp ECSS--SCHHHHHHHHHTTTEECEESGGGTCTTEEEEEC
T ss_pred EcCC--CCHHHHHHHHHHCCEEEeCccccCCCCeEEEEe
Confidence 7653 267788888988999997633 577764
No 144
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=98.99 E-value=2.1e-08 Score=97.15 Aligned_cols=191 Identities=16% Similarity=0.117 Sum_probs=121.1
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------- 119 (337)
...+++| +++++++|.+. .+.+.||+.||..++.+++++
T Consensus 56 ~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~ 126 (412)
T 2cb1_A 56 PTAKALE----ERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYV 126 (412)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEE
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE
Confidence 4445665 57889999874 566777899999888988654
Q ss_pred -------ccc---cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEecccccc-ccc--------eeeeec-c----
Q psy10669 120 -------NNA---RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISG-LIA--------GVKGVT-K---- 173 (337)
Q Consensus 120 -------~~a---~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~G-li~--------g~~~T~-~---- 173 (337)
+.+ ++++|++...+ .+...|+++|.++|+++|+++++|++|..| ... .++++. |
T Consensus 127 ~~~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~ 206 (412)
T 2cb1_A 127 DPEPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASG 206 (412)
T ss_dssp CSSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTC
T ss_pred CCCHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccC
Confidence 000 25788875322 357889999999999999999999999988 322 123332 2
Q ss_pred ----CCchhhhh-----------------------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHH
Q psy10669 174 ----TGEKILYD-----------------------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKS 220 (337)
Q Consensus 174 ----~Gg~i~~~-----------------------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~ 220 (337)
.||+++.+ +.+.++.... ...|....+..++++. ..+ ..+.+
T Consensus 207 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~-~~~g~~~~~~~a~~~~--~~l--~~l~~ 281 (412)
T 2cb1_A 207 HGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGL-SLCGMALSPFNAYLLF--QGL--ETVAL 281 (412)
T ss_dssp SSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHT-TTTCCCCCHHHHHHHH--HHG--GGHHH
T ss_pred CCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHH-HhcCCCCChHHhHHHH--cCC--chHHH
Confidence 14444321 2233332221 1122222233332222 122 23456
Q ss_pred HHHHHHHHHHHHHHHHHh-CCCEEec-CCC---------------CCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 221 YQAQVKANASHLSDEMIK-RGYHVVT-GGT---------------DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 221 y~~~v~~na~~l~~~L~~-~G~~v~~-~~t---------------~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
+.++..+++++|++.|.+ .|+.++. .+. ...++.+.+ + +...+.+.|++.||.+ ..
T Consensus 282 ~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~---~-~~~~~~~~l~~~~i~~-~~ 354 (412)
T 2cb1_A 282 RVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL---G-DLERASRFLGAIRLLK-AA 354 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC---S-SHHHHHHHHHHCSSEE-CS
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe---C-CHHHHHHHHHhCCeee-ec
Confidence 777888999999999998 4887552 222 344777776 3 6788889999999998 54
No 145
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.99 E-value=4.8e-09 Score=101.76 Aligned_cols=238 Identities=9% Similarity=-0.005 Sum_probs=139.2
Q ss_pred ccceeeeccC-CC---CCHHHHHHHhhhhhhcc--CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC---CCCCCccee
Q psy10669 30 INGIELIASE-NF---TSLAVLECLGSCLQNKY--SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL---DPEQWGCNV 100 (337)
Q Consensus 30 ~~~i~l~ase-n~---~~p~V~~a~~~~l~~~y--~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~---~~~~~~~~v 100 (337)
...|.|.... ++ .+|.+.+++...+.... ..+++. .....+++....+.+.+.||. +. .+|
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~~----~~v 112 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYST------TEGDPVLKQQILKLLERMYGITGLDE----DNL 112 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCC------TTCCHHHHHHHHHHHHHHHCCCSCCG----GGE
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCC------CCCCHHHHHHHHHHHHhccCCCCCCc----ccE
Confidence 3456664433 21 46789999887654310 012211 111234543333344444484 33 257
Q ss_pred ecCCC-chhHHHHHHhhCCc--------------------------------------cc-----c--------cccEEE
Q psy10669 101 QPYSG-SPANFAVCEKALPT--------------------------------------NN-----A--------RFDFLS 128 (337)
Q Consensus 101 ~~~Sg-t~AN~~v~~aLl~~--------------------------------------~~-----a--------~pklII 128 (337)
.+++| +.|+..++.+++++ .+ . ++++|+
T Consensus 113 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~ 192 (425)
T 1vp4_A 113 IFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIY 192 (425)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEE
Confidence 78777 67888888888654 00 1 356763
Q ss_pred -Ec-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC----C---chhh
Q psy10669 129 -SG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT----G---EKIL 179 (337)
Q Consensus 129 -~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~----G---g~i~ 179 (337)
+. ..+ .+...+ +++|.++|+++|+++++|++|..+... .+.+|..| | |+++
T Consensus 193 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~ 272 (425)
T 1vp4_A 193 VVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVA 272 (425)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEE
T ss_pred ECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEe
Confidence 43 222 234554 456778999999999999999875432 11333322 3 5555
Q ss_pred h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCCe
Q psy10669 180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDVH 251 (337)
Q Consensus 180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~h 251 (337)
. ++.+.+.....+... ++++...+++..++... .....++.++++.++.++|.+.|.+. |+++... ..+.
T Consensus 273 ~~~~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~-~~g~ 350 (425)
T 1vp4_A 273 GSKEFIRKIVQAKQSADL-CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKS-EGGL 350 (425)
T ss_dssp CCHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCC-SBSS
T ss_pred eCHHHHHHHHHHhhhhcC-CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecC-CccE
Confidence 4 465555433222222 34666666666666543 12234677788889999999999874 7887642 3466
Q ss_pred EEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 252 LILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.+++.+.. +.+..++.+.|.+.||.+.+
T Consensus 351 ~~~~~~~~-~~~~~~l~~~l~~~gi~v~~ 378 (425)
T 1vp4_A 351 FIWLTLPE-GFDTWEMFEYAKRKKVFYVP 378 (425)
T ss_dssp EEEEECCT-TCCTTTTHHHHHHHTEECEE
T ss_pred EEEEEcCC-CCCHHHHHHHHHHCCCEEEC
Confidence 78888864 34566667777766999875
No 146
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.99 E-value=8.7e-09 Score=98.69 Aligned_cols=234 Identities=12% Similarity=-0.003 Sum_probs=139.9
Q ss_pred ccceeeeccC-CC---CCHHHHHHHhhhhhhcc--CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669 30 INGIELIASE-NF---TSLAVLECLGSCLQNKY--SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY 103 (337)
Q Consensus 30 ~~~i~l~ase-n~---~~p~V~~a~~~~l~~~y--~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~ 103 (337)
...|.|-... ++ .+|.+.+++...+.... ..+++. .....+++ +.+++++|.+. .+|.++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~~~~l~----~~la~~~g~~~----~~v~~~ 97 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSP------TEGYAPLR----AFVAEWIGVRP----EEVLIT 97 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCC------TTCCHHHH----HHHHHHHTSCG----GGEEEE
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCC------CCCCHHHH----HHHHHHhCCCh----hhEEEe
Confidence 3456664332 22 36789998876654310 012211 11123444 57788888764 257787
Q ss_pred CC-chhHHHHHHhhCCc--------------------------------------cc-----c-cccEEE-Ec-Ccc-cc
Q psy10669 104 SG-SPANFAVCEKALPT--------------------------------------NN-----A-RFDFLS-SG-TTC-YS 135 (337)
Q Consensus 104 Sg-t~AN~~v~~aLl~~--------------------------------------~~-----a-~pklII-~~-~S~-~~ 135 (337)
+| +.|+..++.+++++ .+ . ++++|+ +. ..+ .+
T Consensus 98 ~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG 177 (397)
T 2zyj_A 98 TGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTG 177 (397)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTC
T ss_pred ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCC
Confidence 77 57888788888654 00 0 367764 33 222 24
Q ss_pred cccChH---HHHHHhhhcCCeEEEeccccccccc----------e---------eeeeccC----C---chhhh--hHHH
Q psy10669 136 RCLDYA---RFRQICDETDSIMFADMSHISGLIA----------G---------VKGVTKT----G---EKILY--DYEE 184 (337)
Q Consensus 136 ~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~----------g---------~~~T~~~----G---g~i~~--~l~~ 184 (337)
...|.+ +|.++|+++|+++++|++|..+... + +++|.+| | |+++. ++.+
T Consensus 178 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~ 257 (397)
T 2zyj_A 178 GLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQ 257 (397)
T ss_dssp CBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHH
Confidence 556655 6778999999999999999874431 0 1233322 2 55554 4655
Q ss_pred HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---CCEEecCCCCCeEEEEEecCCC
Q psy10669 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---GYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
.+.....+...++ ++...+++..++........++.++++.++.++|.+.|.+. |+++... ..+..+++++.. +
T Consensus 258 ~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~-~~g~~~~~~~~~-~ 334 (397)
T 2zyj_A 258 KLVQAKQGADLHT-PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRP-KGGMFVWMELPK-G 334 (397)
T ss_dssp HHHHHHHHHHSSC-CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCC-SBSSEEEEECST-T
T ss_pred HHHHHHHhhcCCC-CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccC-CccEEEEEEcCC-C
Confidence 5554322222333 45555555554433100234567788889999999999874 7887642 345677788754 4
Q ss_pred cchHHHHHHHhhcCceecc
Q psy10669 262 LTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 262 ~~~~~~~~~L~~~gI~v~~ 280 (337)
.+..++.+.|.+.||.+.+
T Consensus 335 ~~~~~~~~~l~~~gi~v~~ 353 (397)
T 2zyj_A 335 LSAEGLFRRALEENVAFVP 353 (397)
T ss_dssp CCHHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHHCCCEEec
Confidence 5677888888888999875
No 147
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=98.98 E-value=8.1e-08 Score=93.04 Aligned_cols=157 Identities=16% Similarity=0.096 Sum_probs=101.6
Q ss_pred cEEEEcCc-cc--ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e-----eeeeccC--C-----c
Q psy10669 125 DFLSSGTT-CY--SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G-----VKGVTKT--G-----E 176 (337)
Q Consensus 125 klII~~~S-~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g-----~~~T~~~--G-----g 176 (337)
++|++.+. .. +...+ +++|.++|+++|++|++|++|+ .|-.+ + ++++ |. | |
T Consensus 206 ~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~s-K~l~~G~~~iG 284 (429)
T 1s0a_A 206 AAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLG-KALTGGTMTLS 284 (429)
T ss_dssp EEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC-GGGGTSSSCCE
T ss_pred EEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEec-ccccCCCccce
Confidence 47777654 22 34455 8889999999999999999997 44222 1 1111 21 2 4
Q ss_pred hhhh--hHHHHHhhc-----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEec
Q psy10669 177 KILY--DYEEKINNA-----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVT 245 (337)
Q Consensus 177 ~i~~--~l~~~i~~~-----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~ 245 (337)
+++. ++.+.+... ...+ .-++++..+++..+++..+.+ +++.+++.++.++|.+.|.+. ++..+.
T Consensus 285 ~~~~~~~~~~~l~~~~~~~~~~~~-t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~ 360 (429)
T 1s0a_A 285 ATLTTREVAETISNGEAGCFMHGP-TFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADVR 360 (429)
T ss_dssp EEEECHHHHHHHHTSTTSSCSCCC-TTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEE
T ss_pred EEEeCHHHHHHhhcCCCcccccCC-CCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 4443 566666542 1112 224577888888888877643 257788899999999999873 443232
Q ss_pred CCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 246 GGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 246 ~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
+...++++++.. ..+..++.+.|.+.||.+.+.. .|||..+
T Consensus 361 --~~g~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~~~~~~iRis~~ 402 (429)
T 1s0a_A 361 --VLGAIGVVETTH-PVNMAALQKFFVEQGVWIRPFGKLIYLMPP 402 (429)
T ss_dssp --EETTEEEEEESS-CBCHHHHHHHHHHTTEECCCBTTEEEECCC
T ss_pred --EeeEEEEEEECC-cccHHHHHHHHHHCCCEEeccCCEEEEECC
Confidence 234467788764 2467778888888899998643 6787644
No 148
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=98.97 E-value=3.4e-08 Score=95.94 Aligned_cols=228 Identities=14% Similarity=0.078 Sum_probs=134.3
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----- 117 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----- 117 (337)
+|.|.+++...+. ++. ..++ .| ......+++ +++++++|.+. .+..+||+.||..++.++.
T Consensus 75 ~p~v~~ai~~~~~-~~~--~~~~-~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~ggteA~~~al~~~~~~~~~ 140 (420)
T 2pb2_A 75 HPALVEALKSQGE-TLW--HTSN-VF-TNEPALRLG----RKLIDATFAER-----VLFMNSGTEANETAFKLARHYACV 140 (420)
T ss_dssp CHHHHHHHHHHHT-TCC--CCCT-TS-CCHHHHHHH----HHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-hcc--cccC-cc-CCHHHHHHH----HHHHhhCCCCe-----EEEeCCHHHHHHHHHHHHHHHhhh
Confidence 8999999987643 332 2222 22 223334444 57788888642 3444566899888877763
Q ss_pred ----Cc-----------------------c------------c-----------c-----cccEEEEcCccc--cc----
Q psy10669 118 ----PT-----------------------N------------N-----------A-----RFDFLSSGTTCY--SR---- 136 (337)
Q Consensus 118 ----~~-----------------------~------------~-----------a-----~pklII~~~S~~--~~---- 136 (337)
++ . . . ++++|++.+... +.
T Consensus 141 ~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~ 220 (420)
T 2pb2_A 141 RHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAAT 220 (420)
T ss_dssp HTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECC
T ss_pred ccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCC
Confidence 21 0 0 0 157888864322 11
Q ss_pred ccChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeeccC--C----chhh-h-hHHHHHhhccCCCC
Q psy10669 137 CLDYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTKT--G----EKIL-Y-DYEEKINNAVFPSL 194 (337)
Q Consensus 137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~~--G----g~i~-~-~l~~~i~~~~~p~~ 194 (337)
..++++|+++|+++|++|++|++|. |+. + + +.+..|. | |+++ . ++.+.+........
T Consensus 221 ~~~l~~l~~l~~~~gi~lI~Dev~~-g~~~~g~~~~~~~~~~~~diit~sK~l~~G~~iG~~~~~~~l~~~l~~~~~~~t 299 (420)
T 2pb2_A 221 PEFLKGLRDLCDEHQALLVFDEVQC-GMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHVGSHGST 299 (420)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEECGGGGTTSCCEEEEECHHHHTTCC----CCE
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCc-CcccCCcHHHHHhcCCCCCeEEecccccCCCceEEEEEhHHHHHhhcCCCcCcc
Confidence 3567889999999999999999994 542 1 1 1111121 1 3333 2 44443333211122
Q ss_pred CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCC-CcchHHHHHH
Q psy10669 195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKN-KLTGSKVELV 270 (337)
Q Consensus 195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~-~~~~~~~~~~ 270 (337)
+ +.++...++...++..+.+ +++.+++.++.++|.+.|.+. ++.++. ......++.+++... +.+..++.+.
T Consensus 300 ~-~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~ 375 (420)
T 2pb2_A 300 Y-GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYA 375 (420)
T ss_dssp E-CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHH
T ss_pred c-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchHHHHHHHHH
Confidence 2 4566666666666766532 577889999999999999774 333221 012456777877542 1246778888
Q ss_pred HhhcCceeccCc--ccchhhh
Q psy10669 271 LEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 271 L~~~gI~v~~~~--girig~~ 289 (337)
|.+.||.+.+.. .+||..+
T Consensus 376 l~~~Gi~v~~~~~~~iRl~~~ 396 (420)
T 2pb2_A 376 GAEAGVMVLNAGADVMRFAPS 396 (420)
T ss_dssp HHHTTEECEESSTTEEEECCC
T ss_pred HHHCCCEEEeCCCCEEEEECC
Confidence 888899998642 5888754
No 149
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.96 E-value=7e-08 Score=91.95 Aligned_cols=234 Identities=12% Similarity=0.043 Sum_probs=142.2
Q ss_pred ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC--CCCCcceeecCCC
Q psy10669 30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD--PEQWGCNVQPYSG 105 (337)
Q Consensus 30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~--~~~~~~~v~~~Sg 105 (337)
+..|.|...++.. +|.|++++...+... .+|+.. .|. .++.....+.+.+.+|.+ .+++ +|.+++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g~---~~lr~~la~~l~~~~g~~~~~~~~--~i~~t~g 99 (396)
T 3jtx_A 30 MEAVPLHIGEPKHPTPKVITDALTASLHEL--EKYPLT---AGL---PELRQACANWLKRRYDGLTVDADN--EILPVLG 99 (396)
T ss_dssp CCCEECSCCSCCSCCCHHHHHHHHHTGGGG--GSCCCT---TCC---HHHHHHHHHHHHHHTTTCCCCTTT--SEEEESS
T ss_pred CCeEEeCCcCCCCCCCHHHHHHHHHHhhhc--cCCCCC---CCc---HHHHHHHHHHHHHhcCCCCCCCCC--eEEEcCC
Confidence 4567777666655 799999998765321 223221 122 344433345666777853 1211 5777777
Q ss_pred -chhHHHHHHhhCC-------c--------------------------------------ccc-----cccEEEEc-Ccc
Q psy10669 106 -SPANFAVCEKALP-------T--------------------------------------NNA-----RFDFLSSG-TTC 133 (337)
Q Consensus 106 -t~AN~~v~~aLl~-------~--------------------------------------~~a-----~pklII~~-~S~ 133 (337)
++|+..++.++++ + .+. ++++|++. +.+
T Consensus 100 ~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~n 179 (396)
T 3jtx_A 100 SREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNN 179 (396)
T ss_dssp HHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCT
T ss_pred cHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCC
Confidence 6788777777741 2 111 26777764 322
Q ss_pred -cccccChHH---HHHHhhhcCCeEEEeccccccccc---------------------eeeeec-cC----C---chhhh
Q psy10669 134 -YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA---------------------GVKGVT-KT----G---EKILY 180 (337)
Q Consensus 134 -~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~---------------------g~~~T~-~~----G---g~i~~ 180 (337)
.+...+.++ |.++|+++|+++++|++|...... .+..|. |. | |+++.
T Consensus 180 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (396)
T 3jtx_A 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG 259 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe
Confidence 245666555 778899999999999999852221 112233 31 2 55544
Q ss_pred --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR 258 (337)
Q Consensus 181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~ 258 (337)
++.+.+..... ....+++++..+++..++.. ....++.++++.++.+++.+.|.+. +.+.. ...+..+++++.
T Consensus 260 ~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~ 334 (396)
T 3jtx_A 260 DAELLKNFLLYRT-YHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV-FDVKL-PDASFYIWLKVP 334 (396)
T ss_dssp CHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCC-CSSSSEEEEECT
T ss_pred CHHHHHHHHHHHh-hcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-CCccC-CCeeEEEEEECC
Confidence 46555554321 12346777777777776654 3455788889999999999999875 44432 234667788886
Q ss_pred CCCcchHHHHHHH-hhcCceecc
Q psy10669 259 KNKLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 259 ~~~~~~~~~~~~L-~~~gI~v~~ 280 (337)
. .+..++.+.| +++||.+.+
T Consensus 335 ~--~~~~~~~~~l~~~~gi~v~~ 355 (396)
T 3jtx_A 335 D--GDDLAFARNLWQKAAIQVLP 355 (396)
T ss_dssp T--SCHHHHHHHHHHHHCEECEE
T ss_pred C--CCHHHHHHHHHHHCCEEEeC
Confidence 5 3566666666 668999865
No 150
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=98.96 E-value=4.4e-09 Score=101.24 Aligned_cols=217 Identities=12% Similarity=0.052 Sum_probs=130.5
Q ss_pred eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcC-ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669 35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG-GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC 113 (337)
Q Consensus 35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~-G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~ 113 (337)
.+.+-.+..+.+.+++. .+.+. ..+-.|-. .....++++ +++++++|.+. .+.++||+.|+..++
T Consensus 31 d~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~l 96 (398)
T 2rfv_A 31 IFQTSTFVFDSAEQGAA-RFALE----ESGYIYTRLGNPTTDALE----KKLAVLERGEA-----GLATASGISAITTTL 96 (398)
T ss_dssp CCCCSBCCCSSHHHHHH-HC---------CCSBTTTCCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred CcCCCccccCCHHHHHH-hhcCC----CCCCceeCCCChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHH
Confidence 44455566677777664 21221 11111111 223344555 68889999873 688999999998888
Q ss_pred HhhCCc--------------------------------------cc--c---cccEEEEcCcc--cccccChHHHHHHhh
Q psy10669 114 EKALPT--------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYARFRQICD 148 (337)
Q Consensus 114 ~aLl~~--------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~l~eia~ 148 (337)
.+++++ .+ + ++++|++..-+ .+...|+++|.++|+
T Consensus 97 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 176 (398)
T 2rfv_A 97 LTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAH 176 (398)
T ss_dssp HHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHH
T ss_pred HHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHH
Confidence 888654 00 0 26777775323 257889999999999
Q ss_pred hcCCeEEEeccccccccc--------eeeeec-c-----C---Cchhhh--hHHH-HHhhccCCCC-CCCCcHHHHHHHH
Q psy10669 149 ETDSIMFADMSHISGLIA--------GVKGVT-K-----T---GEKILY--DYEE-KINNAVFPSL-QGGPHNHAIGAIA 207 (337)
Q Consensus 149 ~~ga~l~vD~AH~~Gli~--------g~~~T~-~-----~---Gg~i~~--~l~~-~i~~~~~p~~-~g~~~~~~iaala 207 (337)
++|+++++|++|..|... .++++. | . ||+++. ++.+ .+..... .. .++.++...++..
T Consensus 177 ~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 255 (398)
T 2rfv_A 177 QQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLK-DITGGCMSPFNAWLTL 255 (398)
T ss_dssp HTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHH-HTTCCCCCHHHHHHHH
T ss_pred HcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHH-hCCCCCCCHHHHHHHH
Confidence 999999999999988764 122332 2 1 466654 3433 4443322 22 2456666655555
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC---------------CEEecC--CCCCeEEEEEecCCCcchHHHHHH
Q psy10669 208 TAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---------------YHVVTG--GTDVHLILIDLRKNKLTGSKVELV 270 (337)
Q Consensus 208 ~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G---------------~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~~ 270 (337)
.++.. ...+.++..+|++.+++.|.+.+ +++... .....++.+++... .......
T Consensus 256 ~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~l 327 (398)
T 2rfv_A 256 RGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG---LEAGRRM 327 (398)
T ss_dssp HHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH---HHHHHHH
T ss_pred hhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC---HHHHHHH
Confidence 55432 34567778899999999998754 222110 13467788877531 3345566
Q ss_pred Hhhc
Q psy10669 271 LEEI 274 (337)
Q Consensus 271 L~~~ 274 (337)
+++.
T Consensus 328 ~~~~ 331 (398)
T 2rfv_A 328 INSV 331 (398)
T ss_dssp HTTC
T ss_pred HHhC
Confidence 6654
No 151
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.96 E-value=1.6e-08 Score=96.82 Aligned_cols=229 Identities=16% Similarity=0.081 Sum_probs=138.8
Q ss_pred CCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669 40 NFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA 116 (337)
Q Consensus 40 n~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL 116 (337)
|++ +|.|.+++...+. ++. ..++ .| ......+++ +++++++|.+. .+..+||+.||..++.++
T Consensus 52 ~~lg~~~~~v~~a~~~~~~-~~~--~~~~-~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~gg~~a~~~al~~~ 117 (397)
T 2ord_A 52 NVLGHSHPRLVEAIKDQAE-KLI--HCSN-LF-WNRPQMELA----ELLSKNTFGGK-----VFFANTGTEANEAAIKIA 117 (397)
T ss_dssp CTTCBTCHHHHHHHHHHHH-HCS--CCCT-TS-EEHHHHHHH----HHHHHTTTSCE-----EEEESSHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHH-hcc--cCcc-cc-CCHHHHHHH----HHHHHhcCCCe-----EEEeCCHHHHHHHHHHHH
Confidence 555 8999999987654 332 2222 22 223334454 68889998542 344556689988877776
Q ss_pred C-------C-c-----------------------c------------c-----------c-----cccEEEEcCccc--c
Q psy10669 117 L-------P-T-----------------------N------------N-----------A-----RFDFLSSGTTCY--S 135 (337)
Q Consensus 117 l-------~-~-----------------------~------------~-----------a-----~pklII~~~S~~--~ 135 (337)
. + + + . . ++++|++..-.+ +
T Consensus 118 ~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG 197 (397)
T 2ord_A 118 RKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESG 197 (397)
T ss_dssp HHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTT
T ss_pred HHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCC
Confidence 3 2 2 1 1 0 157888764222 2
Q ss_pred c----ccChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc------CCchhhh--hHHHHHhhc
Q psy10669 136 R----CLDYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK------TGEKILY--DYEEKINNA 189 (337)
Q Consensus 136 ~----~~d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~------~Gg~i~~--~l~~~i~~~ 189 (337)
. ..++++|.++|+++|++|++|++|+ |+. + + +.+..| ..|+++. ++. .+...
T Consensus 198 ~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~r~G~~~~~~~~~-~l~~~ 275 (397)
T 2ord_A 198 IVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVLTTAKGLGGGVPIGAVIVNERAN-VLEPG 275 (397)
T ss_dssp CEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEECGGGGTTSCCEEEEECSTTC-CCCTT
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCeeeeccccCCCcCeEEEEEchHhc-ccCCC
Confidence 3 3577888899999999999999996 542 1 1 111112 1133332 343 33321
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCCcchHH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~~~~~~ 266 (337)
.... .-++++...+++..++..+.+ ++.++++.++.++|.+.|.+. ++.+.. ......++++++... .+..+
T Consensus 276 ~~~~-~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ 350 (397)
T 2ord_A 276 DHGT-TFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREE-VSNRE 350 (397)
T ss_dssp SSCC-SSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTT-SCHHH
T ss_pred CcCC-CCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECCh-HHHHH
Confidence 1111 224566777777777766532 467888999999999999875 344321 012345677887653 35777
Q ss_pred HHHHHhhcCceeccC--cccchhhh
Q psy10669 267 VELVLEEIAIACNKN--TGISLAAE 289 (337)
Q Consensus 267 ~~~~L~~~gI~v~~~--~girig~~ 289 (337)
+.+.|.+.||.+.+. ..+||+.+
T Consensus 351 l~~~l~~~gi~v~~~~~~~iRis~~ 375 (397)
T 2ord_A 351 VATKCFENKLLVVPAGNNTIRFLPP 375 (397)
T ss_dssp HHHHHHHTTEECEEETTTEEEECCC
T ss_pred HHHHHHHCCCEEccCCCCEEEEECC
Confidence 888888889999864 26787743
No 152
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.95 E-value=9.6e-08 Score=91.68 Aligned_cols=235 Identities=14% Similarity=0.098 Sum_probs=136.7
Q ss_pred ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh--cC-CCCCCCcceeecCC
Q psy10669 30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA--FN-LDPEQWGCNVQPYS 104 (337)
Q Consensus 30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l--fg-~~~~~~~~~v~~~S 104 (337)
...|.|...++- .+|.|++++...+.. +... .+...|.-.....+++ +.++++ +| .+. .+|.+++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~-~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~----~~v~~~~ 102 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIAR-LSSP-TTCRGYGPDFGLPALR----QKLSEDFYRGFVDA----KEIFISD 102 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHH-HTSS-SCCCCCCCTTCCHHHH----HHHHHTTSTTSSCG----GGEEEES
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhc-cccc-ccccCCCCCCCCHHHH----HHHHHHHHcCCCCH----HHEEEcc
Confidence 345666665553 489999999876543 2111 1111122112223444 566777 57 444 2588888
Q ss_pred Cc-hhHHHHHHhhCCc-----------------------c----------------c---ccccEEEEcCccc--ccccC
Q psy10669 105 GS-PANFAVCEKALPT-----------------------N----------------N---ARFDFLSSGTTCY--SRCLD 139 (337)
Q Consensus 105 gt-~AN~~v~~aLl~~-----------------------~----------------~---a~pklII~~~S~~--~~~~d 139 (337)
|+ +++..+ ..++++ + + .++++|++....+ +...|
T Consensus 103 G~~~al~~~-~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~ 181 (400)
T 3asa_A 103 GAKVDLFRL-LSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLN 181 (400)
T ss_dssp CHHHHHHHH-HHHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCC
T ss_pred ChHHHHHHH-HHHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCC
Confidence 84 565554 344332 1 0 1257777753333 45555
Q ss_pred h---HHHHHHhhhcCCeEEEecccc-c---cc----cc---------eeeeec-c----CC---chhhh--hH-------
Q psy10669 140 Y---ARFRQICDETDSIMFADMSHI-S---GL----IA---------GVKGVT-K----TG---EKILY--DY------- 182 (337)
Q Consensus 140 ~---~~l~eia~~~ga~l~vD~AH~-~---Gl----i~---------g~~~T~-~----~G---g~i~~--~l------- 182 (337)
. ++|.++|+++|+++++|++|. . |- +. .+.+|. | .| |+++. ++
T Consensus 182 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~ 261 (400)
T 3asa_A 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF 261 (400)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB
T ss_pred HHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhh
Confidence 4 456788999999999999998 3 21 10 112333 2 23 55544 34
Q ss_pred HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE-ecCCC
Q psy10669 183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID-LRKNK 261 (337)
Q Consensus 183 ~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~-~~~~~ 261 (337)
.+.+.........++++++..+++..++... ..++.++++.++.++|.+.|.+.|+++..+ ..+..++++ +.. +
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~-~ 336 (400)
T 3asa_A 262 VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLATGFEVFGG-EHAPYLWVKPTQA-N 336 (400)
T ss_dssp HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHTTCEEEEC-SSSSEEEEECCCT-T
T ss_pred HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHCCCeeeCC-CCceEEEEeccCC-C
Confidence 3333211111123466777777776666543 356778899999999999999999988753 335567887 643 3
Q ss_pred cchHHHHHHH-hhcCceecc
Q psy10669 262 LTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 262 ~~~~~~~~~L-~~~gI~v~~ 280 (337)
.+..++...| +++||.+.+
T Consensus 337 ~~~~~~~~~l~~~~gv~v~~ 356 (400)
T 3asa_A 337 ISDRDLFDFFLREYHIAITP 356 (400)
T ss_dssp CCTTTHHHHHHHHHSEECEE
T ss_pred CCHHHHHHHHHHhCCEEEeC
Confidence 4554455544 567999875
No 153
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.95 E-value=4.2e-08 Score=92.88 Aligned_cols=194 Identities=13% Similarity=0.095 Sum_probs=124.5
Q ss_pred HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCC---c--------------------------------------
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALP---T-------------------------------------- 119 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~---~-------------------------------------- 119 (337)
++.+++++|.+. .+|.+++| ++++..++.++++ +
T Consensus 64 r~~la~~~~~~~----~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~ 139 (356)
T 1fg7_A 64 IENYAQYAGVKP----EQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQG 139 (356)
T ss_dssp HHHHHHHHTSCG----GGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHH
T ss_pred HHHHHHHhCCCh----HHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHH
Confidence 467889999875 36888888 6788788888863 2
Q ss_pred -ccc--cccEEEEcCccc--ccccChHHHHHHhhh--cCCeEEEeccccccc-----cc--------eeeeeccC-----
Q psy10669 120 -NNA--RFDFLSSGTTCY--SRCLDYARFRQICDE--TDSIMFADMSHISGL-----IA--------GVKGVTKT----- 174 (337)
Q Consensus 120 -~~a--~pklII~~~S~~--~~~~d~~~l~eia~~--~ga~l~vD~AH~~Gl-----i~--------g~~~T~~~----- 174 (337)
+.+ ++++|++..-++ +...|.+++.+|++. +|+++++|++|..+. .. .+..|..|
T Consensus 140 l~~~i~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 219 (356)
T 1fg7_A 140 ISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALA 219 (356)
T ss_dssp HHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCG
T ss_pred HHHHhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCc
Confidence 001 356677653333 467777766655443 899999999998432 11 12233322
Q ss_pred C---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecCC
Q psy10669 175 G---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTGG 247 (337)
Q Consensus 175 G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~~ 247 (337)
| |+++. ++.+.+.....+. +++++..++...++........++.++++.++.++|.+.|.+.| +.+..
T Consensus 220 G~r~G~~~~~~~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-- 294 (356)
T 1fg7_A 220 GLRCGFTLANEEVINLLMKVIAPY---PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFD-- 294 (356)
T ss_dssp GGCCEEEEECHHHHHHHHHHSCSS---CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECC--
T ss_pred hhhhEEEEeCHHHHHHHHHhcCCC---CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECC--
Confidence 2 55554 5667666553332 45666666655555432101156778889999999999999876 44433
Q ss_pred CCCeEEEEEecCCCcchHHHHHHHhhcCceecc-Cc------ccchhh
Q psy10669 248 TDVHLILIDLRKNKLTGSKVELVLEEIAIACNK-NT------GISLAA 288 (337)
Q Consensus 248 t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~-~~------girig~ 288 (337)
+....+++++. +..++.+.|.+.||.+.+ -. .+||+.
T Consensus 295 ~~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~ 338 (356)
T 1fg7_A 295 SETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITV 338 (356)
T ss_dssp CSSSEEEEEET----THHHHHHHHHHTTEECEECTTSTTCTTEEEEEC
T ss_pred CCCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEe
Confidence 34556678775 567788888889999987 22 477764
No 154
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=98.93 E-value=1.2e-08 Score=99.77 Aligned_cols=226 Identities=12% Similarity=0.038 Sum_probs=133.8
Q ss_pred cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669 31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF 110 (337)
Q Consensus 31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~ 110 (337)
-...+.-|-.|.-|...+.. ..+..+...++.-.|+ ++...+++| +++++++|.+. .+.++||+.||.
T Consensus 44 ~~~pi~~s~t~~~~~~~~~~-~~~~~~~~~~~~y~r~--~~p~~~~le----~~lA~l~g~~~-----~i~~ssGt~Ai~ 111 (415)
T 2fq6_A 44 VNSVIQRASSLVFDSVEAKK-HATRNRANGELFYGRR--GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVA 111 (415)
T ss_dssp SSCCBCCCSCBCCSSHHHHH-HHHHTTTTTSCCCTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred EeCCeecccceeeCCHHHHH-HhhccccCCCccccCC--CCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHH
Confidence 34567777788744432211 1111110112332332 455567777 58899999874 688899999998
Q ss_pred HHHHhhCCc----------------------------------------ccc---cccEEEEcCcc--cccccChHHHHH
Q psy10669 111 AVCEKALPT----------------------------------------NNA---RFDFLSSGTTC--YSRCLDYARFRQ 145 (337)
Q Consensus 111 ~v~~aLl~~----------------------------------------~~a---~pklII~~~S~--~~~~~d~~~l~e 145 (337)
.++.+++++ +.+ ++|+|++...+ .+...|+++|.+
T Consensus 112 ~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~ 191 (415)
T 2fq6_A 112 NSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVA 191 (415)
T ss_dssp HHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHH
Confidence 889998764 111 15788875333 358889999999
Q ss_pred Hhhh--cCCeEEEeccccccccc--------eeeeec-c----C----Cchhhh--hHHHHHhhccCCCCCCCCcHHHHH
Q psy10669 146 ICDE--TDSIMFADMSHISGLIA--------GVKGVT-K----T----GEKILY--DYEEKINNAVFPSLQGGPHNHAIG 204 (337)
Q Consensus 146 ia~~--~ga~l~vD~AH~~Gli~--------g~~~T~-~----~----Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~ia 204 (337)
+|++ +|+++++|++|..|+.. .++++. | . ||+++. ++.+.+..... ..|+...+..+
T Consensus 192 la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~--~~G~~~~~~~a 269 (415)
T 2fq6_A 192 AVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAY--LMGQMVDADTA 269 (415)
T ss_dssp HHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHH--HTTCCCCHHHH
T ss_pred HHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHH--hcCCCCCHHHH
Confidence 9999 99999999999987532 133333 2 1 466654 45454443211 12233333323
Q ss_pred HHH-HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCC---------------CCCeEEEEEecCCCcchHH
Q psy10669 205 AIA-TAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGG---------------TDVHLILIDLRKNKLTGSK 266 (337)
Q Consensus 205 ala-~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~---------------t~~h~v~V~~~~~~~~~~~ 266 (337)
.++ .++. ....+.++..+|++.+++.|.+. ++. +...+ ...+++.+.+... .+..+
T Consensus 270 ~~~~~~l~-----~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~-~~~~~ 343 (415)
T 2fq6_A 270 YITSRGLR-----TLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKK-LNNEE 343 (415)
T ss_dssp HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC-CCHHH
T ss_pred HHHHhhhh-----HHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCC-CCHHH
Confidence 222 2222 34567788899999999999885 232 21111 1356777777531 12355
Q ss_pred HHHHHhhcCc
Q psy10669 267 VELVLEEIAI 276 (337)
Q Consensus 267 ~~~~L~~~gI 276 (337)
+.+.|+...+
T Consensus 344 ~~~~l~~l~~ 353 (415)
T 2fq6_A 344 LANYLDNFSL 353 (415)
T ss_dssp HHHHHTTCSS
T ss_pred HHHHHHhCCc
Confidence 6677776543
No 155
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.93 E-value=4.1e-08 Score=95.80 Aligned_cols=213 Identities=15% Similarity=0.179 Sum_probs=130.9
Q ss_pred CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--
Q psy10669 42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-- 119 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-- 119 (337)
+++.+.+++... ...|.......+++ +++++++|.+. .+..+||+.|+..++.+++++
T Consensus 56 ~~~~~~~a~~~~-----------~~~y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~al~~l~~~gd 115 (456)
T 2ez2_A 56 MSDKQWAGMMMG-----------DEAYAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAENLLSQLAIKPGQ 115 (456)
T ss_dssp CCHHHHHHHTTC-----------CCCSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHHHHHHHHHCCTTC
T ss_pred CCHHHHHHhhcc-----------hhhcccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhCCCCC
Confidence 468888877521 11233344445565 57889999864 466677799988888887542
Q ss_pred ---------------------------c------------cc----------c--c----cEEEEc-Ccc--cccccC--
Q psy10669 120 ---------------------------N------------NA----------R--F----DFLSSG-TTC--YSRCLD-- 139 (337)
Q Consensus 120 ---------------------------~------------~a----------~--p----klII~~-~S~--~~~~~d-- 139 (337)
. -. + + ++|++. +.+ .+...|
T Consensus 116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~ 195 (456)
T 2ez2_A 116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMA 195 (456)
T ss_dssp EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHH
T ss_pred EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHH
Confidence 1 00 0 3 666665 433 356776
Q ss_pred -hHHHHHHhhhcCCeEEEecccccc---------c-c------------c----eeeeecc------CCchhhh---hHH
Q psy10669 140 -YARFRQICDETDSIMFADMSHISG---------L-I------------A----GVKGVTK------TGEKILY---DYE 183 (337)
Q Consensus 140 -~~~l~eia~~~ga~l~vD~AH~~G---------l-i------------~----g~~~T~~------~Gg~i~~---~l~ 183 (337)
+++|.++|+++|++|++|++|..| + . + .++++.| .||++++ ++.
T Consensus 196 ~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~~~~~~~ 275 (456)
T 2ez2_A 196 NMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMF 275 (456)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEECCHHHH
Confidence 788889999999999999999875 1 1 1 1222222 3677764 355
Q ss_pred HHHhhcc---CC-CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669 184 EKINNAV---FP-SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK 259 (337)
Q Consensus 184 ~~i~~~~---~p-~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~ 259 (337)
+.+.... .. ...++.+...+++++.++.+... +++.++..+++++|.+.|.+.|+++.. ....+.+++++..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~g~~~~~-p~~~~~~~~~~~~ 351 (456)
T 2ez2_A 276 SSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLKAAGVPIVE-PVGGHAVFLDARR 351 (456)
T ss_dssp HHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTTCCBCS-SCCSSEEEEEHHH
T ss_pred HHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHhcCCCcccc-CCCceEEEEEhHH
Confidence 5443211 11 11234444555554555544321 467888888999999999998888764 2457788888742
Q ss_pred --CCcchHHH-----HHHH-hhcCcee
Q psy10669 260 --NKLTGSKV-----ELVL-EEIAIAC 278 (337)
Q Consensus 260 --~~~~~~~~-----~~~L-~~~gI~v 278 (337)
.+.+..++ .+.| ++.||.+
T Consensus 352 ~~~~~~~~~~~~~~l~~~L~~~~gv~~ 378 (456)
T 2ez2_A 352 FCEHLTQDEFPAQSLAASIYVETGVRS 378 (456)
T ss_dssp HTTTSCGGGCHHHHHHHHHHHHHSEEC
T ss_pred hcCCCChhhccHHHHHHHHHHhcCeee
Confidence 23333333 5555 6778875
No 156
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=98.93 E-value=4e-08 Score=97.19 Aligned_cols=218 Identities=12% Similarity=0.044 Sum_probs=129.4
Q ss_pred cCccchHHHHHHHHHHHHHhhcCCCCCCC-------cceeecCCCchhHHHHHHhhC--------------------Cc-
Q psy10669 68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQW-------GCNVQPYSGSPANFAVCEKAL--------------------PT- 119 (337)
Q Consensus 68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~~-------~~~v~~~Sgt~AN~~v~~aLl--------------------~~- 119 (337)
|.......++|..+++.++++||.+.. | +..+...+||.||+.++.++. ++
T Consensus 105 ~~~~~~~~~le~~~~~~la~l~g~~~~-~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~ 183 (486)
T 1js3_A 105 WAASPACTELETVMMDWLGKMLQLPEA-FLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKL 183 (486)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHTTCCGG-GCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHE
T ss_pred cccChhHHHHHHHHHHHHHHHhCCCch-hcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCE
Confidence 444455678998888999999999742 1 113555566889877664431 01
Q ss_pred -------------------------------------ccc-----c------ccEEEEc-C-cccccccChHHHHHHhhh
Q psy10669 120 -------------------------------------NNA-----R------FDFLSSG-T-TCYSRCLDYARFRQICDE 149 (337)
Q Consensus 120 -------------------------------------~~a-----~------pklII~~-~-S~~~~~~d~~~l~eia~~ 149 (337)
.+. + |.+|+++ + +.++..-|+++|.++|++
T Consensus 184 ~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~ 263 (486)
T 1js3_A 184 VAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHE 263 (486)
T ss_dssp EEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 000 0 2366665 3 345788899999999999
Q ss_pred cCCeEEEeccccccccc------------e---eeee-cc-----C-Cchhhh-h---HHHHHhh---ccCCC-------
Q psy10669 150 TDSIMFADMSHISGLIA------------G---VKGV-TK-----T-GEKILY-D---YEEKINN---AVFPS------- 193 (337)
Q Consensus 150 ~ga~l~vD~AH~~Gli~------------g---~~~T-~~-----~-Gg~i~~-~---l~~~i~~---~~~p~------- 193 (337)
+|++++||+||+.|.+. + +++. +| . .|+++. + +.+.+.. .++..
T Consensus 264 ~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~ 343 (486)
T 1js3_A 264 EDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLI 343 (486)
T ss_dssp TTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSC
T ss_pred cCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCC
Confidence 99999999999987642 1 2222 22 2 255543 2 2332210 01110
Q ss_pred -------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchH
Q psy10669 194 -------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGS 265 (337)
Q Consensus 194 -------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~ 265 (337)
+..+.. ....++.+++..+....++++.++..+++++|.+.|.+. |++++.. .+.+++.+.+........
T Consensus 344 ~~~~~~~~~~~rr-~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~ 421 (486)
T 1js3_A 344 TDYRHWQLPLGRR-FRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE-VTLGLVCFRLKGSDGLNE 421 (486)
T ss_dssp CCGGGSSSCSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC-CCSSEEEEEESSCHHHHH
T ss_pred CCccccCCCCCCc-hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CceeEEEEEecChHHHHH
Confidence 011111 123455555555544567888999999999999999985 9998752 345666665542211136
Q ss_pred HHHHHHhhcCcee-ccC-----cccchhh
Q psy10669 266 KVELVLEEIAIAC-NKN-----TGISLAA 288 (337)
Q Consensus 266 ~~~~~L~~~gI~v-~~~-----~girig~ 288 (337)
++.+.|.+.|+.+ ... ..+|++.
T Consensus 422 ~l~~~L~~~g~~~~~~~~~~~~~~lRi~~ 450 (486)
T 1js3_A 422 ALLERINSARKIHLVPCRLRGQFVLRFAI 450 (486)
T ss_dssp HHHHHHHHHTSCBCEEEEETTEEEEEEEC
T ss_pred HHHHHHHhcCCEEEEEEEECCEEEEEEEe
Confidence 6777777667542 221 1677763
No 157
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.92 E-value=2.5e-08 Score=97.51 Aligned_cols=152 Identities=14% Similarity=0.165 Sum_probs=91.8
Q ss_pred ccEEEEcCcccc---cc---cChHHHHHHhhhcCCeEEEeccccc-ccc----------c---------------eeeee
Q psy10669 124 FDFLSSGTTCYS---RC---LDYARFRQICDETDSIMFADMSHIS-GLI----------A---------------GVKGV 171 (337)
Q Consensus 124 pklII~~~S~~~---~~---~d~~~l~eia~~~ga~l~vD~AH~~-Gli----------~---------------g~~~T 171 (337)
+++|++....++ .. .++++|+++|+++|++|++|++|.. |.. + .++++
T Consensus 184 ~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s 263 (467)
T 2oqx_A 184 VPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMS 263 (467)
T ss_dssp CCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEE
T ss_pred eeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEe
Confidence 467777643332 33 3467888999999999999998876 221 1 11223
Q ss_pred c-c-----CCchhhh--h-HHH---HHhhcc--CCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q psy10669 172 T-K-----TGEKILY--D-YEE---KINNAV--FPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE 235 (337)
Q Consensus 172 ~-~-----~Gg~i~~--~-l~~---~i~~~~--~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~ 235 (337)
. | .||++++ + +.+ ++.... .++. .++.....++++..++.+... ++..++..++.++|.+.
T Consensus 264 ~sK~~g~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~~~~~~~~~~l~~~ 340 (467)
T 2oqx_A 264 AKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLAYRIAQVQYLVDG 340 (467)
T ss_dssp SSSTTCCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHHHHHHHHHHHHHHH
Confidence 2 2 3677654 4 333 333221 2222 344455555555555443322 23556677899999999
Q ss_pred HHhCCCEEecCCCCCeEEEEEecC--CCcc-----hHHHHHHH-hhcCceecc
Q psy10669 236 MIKRGYHVVTGGTDVHLILIDLRK--NKLT-----GSKVELVL-EEIAIACNK 280 (337)
Q Consensus 236 L~~~G~~v~~~~t~~h~v~V~~~~--~~~~-----~~~~~~~L-~~~gI~v~~ 280 (337)
|.+.|+++. . ..++.+++++.. .+.+ +..+.+.| .+.||.+.+
T Consensus 341 L~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~ 391 (467)
T 2oqx_A 341 LEEIGVVCQ-Q-AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVE 391 (467)
T ss_dssp HHHTTCCEE-E-ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEE
T ss_pred HHHCCCeee-c-CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecc
Confidence 998888876 2 456788888753 2223 34456777 788999865
No 158
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.92 E-value=2.8e-08 Score=92.94 Aligned_cols=228 Identities=15% Similarity=0.170 Sum_probs=131.6
Q ss_pred eccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHH
Q psy10669 36 IASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAV 112 (337)
Q Consensus 36 ~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v 112 (337)
+.++|.. +|.|++++...+. ++ ...|+......++ ++.+++++|. . .++.+ +||+.||..+
T Consensus 12 ~~~~~~~~~~~~v~~a~~~~~~-----~~--~~~~~~~~~~~~l----~~~la~~~g~-~----~~v~~~~~gt~a~~~a 75 (356)
T 1v72_A 12 FSSDNIAGASPEVAQALVKHSS-----GQ--AGPYGTDELTAQV----KRKFCEIFER-D----VEVFLVPTGTAANALC 75 (356)
T ss_dssp CSCGGGCCCCHHHHHHHHHTTS-----SC--CCSTTCSHHHHHH----HHHHHHHHTS-C----CEEEEESCHHHHHHHH
T ss_pred eccCCccCCCHHHHHHHHhhcc-----Cc--ccccccchHHHHH----HHHHHHHhCC-C----CcEEEeCCccHHHHHH
Confidence 3344443 8999999976431 11 1122222222334 4688889993 3 25444 6668898888
Q ss_pred HHhhCCc---------------------------------------------c-cc---------cccEEEEcC-ccccc
Q psy10669 113 CEKALPT---------------------------------------------N-NA---------RFDFLSSGT-TCYSR 136 (337)
Q Consensus 113 ~~aLl~~---------------------------------------------~-~a---------~pklII~~~-S~~~~ 136 (337)
+.+++++ + .. +|++|++.. ++.+.
T Consensus 76 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~ 155 (356)
T 1v72_A 76 LSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGS 155 (356)
T ss_dssp HHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSC
T ss_pred HHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCc
Confidence 8887543 1 11 146666653 34456
Q ss_pred ---ccChHHHHHHhhhcCCeEEEecccccccc--------------c--eeeeec-c----CC-chhhh--hHHHHHhhc
Q psy10669 137 ---CLDYARFRQICDETDSIMFADMSHISGLI--------------A--GVKGVT-K----TG-EKILY--DYEEKINNA 189 (337)
Q Consensus 137 ---~~d~~~l~eia~~~ga~l~vD~AH~~Gli--------------~--g~~~T~-~----~G-g~i~~--~l~~~i~~~ 189 (337)
..|+++|.++|+++|++|++|++|..+.. . .++.+. | .| |+++. ++.+.+...
T Consensus 156 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~~ 235 (356)
T 1v72_A 156 IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYR 235 (356)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHHHH
Confidence 45567788999999999999999964211 0 122222 2 35 46654 455544321
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669 190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVE 268 (337)
Q Consensus 190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~ 268 (337)
..+ .|+...+...+...++..+.+..+.+..++..++.++|.+.|.+ .|+++... ..++.+++++. .++.
T Consensus 236 ~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~~~~~~~~~------~~~~ 306 (356)
T 1v72_A 236 RKR--AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGG-TEANILFCRLD------SAMI 306 (356)
T ss_dssp HHH--TTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESC-CCSSEEEEEEC------HHHH
T ss_pred hhc--cCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccC-CCccEEEEEcC------HHHH
Confidence 110 11111111222222333332333556788889999999999988 59988643 45667777764 2567
Q ss_pred HHHhhcCceeccC----cccchhh
Q psy10669 269 LVLEEIAIACNKN----TGISLAA 288 (337)
Q Consensus 269 ~~L~~~gI~v~~~----~girig~ 288 (337)
+.|.+.||.+.+- ..+||+.
T Consensus 307 ~~l~~~gi~v~~g~~~~~~iRi~~ 330 (356)
T 1v72_A 307 DALLKAGFGFYHDRWGPNVVRFVT 330 (356)
T ss_dssp HHHHHTTCBCBCSSSSTTEEEEEC
T ss_pred HHHHhcCeEEeccccCCCeEEEEe
Confidence 7777789998742 2467753
No 159
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=98.91 E-value=5.6e-08 Score=94.43 Aligned_cols=156 Identities=7% Similarity=-0.031 Sum_probs=89.4
Q ss_pred ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeeccC-------Cch
Q psy10669 124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVTKT-------GEK 177 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~~~-------Gg~ 177 (337)
+++|++. +++ .+...| +++|.++|+++|+++++|++|..++-+ .+++|.+| .|+
T Consensus 207 ~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~ 286 (444)
T 3if2_A 207 IGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGI 286 (444)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEE
T ss_pred ceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEE
Confidence 4666664 333 356677 666778899999999999999742211 12334322 255
Q ss_pred hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-chhhHH-HHHHHHHHHHHHHHHHHh----CCCEEecCCCC
Q psy10669 178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-SDEFKS-YQAQVKANASHLSDEMIK----RGYHVVTGGTD 249 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-~~~~~~-y~~~v~~na~~l~~~L~~----~G~~v~~~~t~ 249 (337)
++. ++.+.+.....+... ++++...++++..+.... .....+ .++.+.++.+.+.+.|.+ .|+.+.. ...
T Consensus 287 ~~~~~~l~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~ 364 (444)
T 3if2_A 287 IVADAKVIEAVSAMNAVVNL-APTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHK-PEG 364 (444)
T ss_dssp EECCHHHHHHHHHHHHHHHS-SCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEEC-CCB
T ss_pred EEECHHHHHHHHHHHHhccC-CCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEec-CCc
Confidence 544 465555433221112 223333443333332211 011112 445566677777777765 2566653 234
Q ss_pred CeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669 250 VHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~ 281 (337)
+..+++++...+.+..++.+.|.+.||.+.+-
T Consensus 365 g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g 396 (444)
T 3if2_A 365 AIFLWLWFKDLPISTLDLYERLKAKGTLIVPS 396 (444)
T ss_dssp SSEEEEEETTCSSCHHHHHHHHHHTTEECEEG
T ss_pred cEEEEEEcCCCCCCHHHHHHHHHHCCeEEecc
Confidence 56677888765678888999999899998753
No 160
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=98.91 E-value=2.3e-08 Score=96.56 Aligned_cols=193 Identities=12% Similarity=0.069 Sum_probs=115.6
Q ss_pred chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------- 119 (337)
...+++| +++++++|.+. .+.++||+.||..++.+++++
T Consensus 66 ~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v 136 (392)
T 3qhx_A 66 PTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV 136 (392)
T ss_dssp HHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence 4445555 68899999874 688889999998888988654
Q ss_pred --------ccc---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc----
Q psy10669 120 --------NNA---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK---- 173 (337)
Q Consensus 120 --------~~a---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~---- 173 (337)
+.+ ++++|++.. ++ .+...|+++|.++|+++|+++++|++|..++.. .++.+ +|
T Consensus 137 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 216 (392)
T 3qhx_A 137 ALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGG 216 (392)
T ss_dssp CTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTC
T ss_pred CCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCC
Confidence 001 267777653 22 357889999999999999999999999987654 12322 22
Q ss_pred ----CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-Ee
Q psy10669 174 ----TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VV 244 (337)
Q Consensus 174 ----~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~ 244 (337)
.||+++. ++.+.+..... ....++++.. ++++.. .+ .....+.++..+|++++++.|.+. ++. +.
T Consensus 217 ~g~~~~G~v~~~~~~~~~~l~~~~~-~~g~~~~~~~-~~~~~~--~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~ 290 (392)
T 3qhx_A 217 HSDVVGGALVTNDEELDQSFAFLQN-GAGAVPGPFD-AYLTMR--GL--KTLVLRMQRHSENAAAVAEFLAEHPAISTVL 290 (392)
T ss_dssp SSCCCCEEEEESCHHHHHHHHHHHH-HHCCCCCHHH-HHHHHH--HH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred CCCceEEEEEECcHHHHHHHHHHHH-hcCCCCCHHH-HHHHHh--hh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceEE
Confidence 1455553 35555443211 1112233322 222222 22 134567888999999999999874 342 32
Q ss_pred cCCCC---------------CeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 245 TGGTD---------------VHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 245 ~~~t~---------------~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
..+-. ..++.+.+......+..+-+.|+..||.++
T Consensus 291 ~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s 340 (392)
T 3qhx_A 291 YPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAES 340 (392)
T ss_dssp CTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSC
T ss_pred CCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCC
Confidence 22111 346777775421233334444444455554
No 161
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=98.90 E-value=1.9e-08 Score=98.89 Aligned_cols=188 Identities=13% Similarity=0.080 Sum_probs=118.9
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
++...+++| +++++++|.+. .+.++||+.|+..++.+++++
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~ 150 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVR 150 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEE
T ss_pred CCHHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEE
Confidence 445567777 57889999875 688999999999888998765
Q ss_pred ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---eeee-cc--
Q psy10669 120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VKGV-TK-- 173 (337)
Q Consensus 120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~~T-~~-- 173 (337)
+.+ ++++|++. .++ .+...|+++|.++|+++|++|++|++|..|... | ++++ +|
T Consensus 151 ~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l 230 (430)
T 3ri6_A 151 FVDVMDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFI 230 (430)
T ss_dssp EECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEE
T ss_pred EeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccc
Confidence 101 26777775 333 458889999999999999999999999988764 1 2222 22
Q ss_pred ------CCchhhh--h--H------------------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669 174 ------TGEKILY--D--Y------------------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225 (337)
Q Consensus 174 ------~Gg~i~~--~--l------------------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v 225 (337)
.||+++. + + ..++...... ..|+...+..|.++.. .+ .....+.++.
T Consensus 231 ~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~-~~g~~~~~~~a~l~l~--~l--~~l~~r~~~~ 305 (430)
T 3ri6_A 231 SGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQ-NLGPSLSPHNAYLQSL--GL--ETMALRIERS 305 (430)
T ss_dssp ETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHH-HHCCCCCHHHHHHHHH--HH--HHHHHHHHHH
T ss_pred cCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHH-hcCCCCCHHHHHHHHh--hh--hhHHHHHHHH
Confidence 4676662 1 2 1111111111 1233333444443322 22 2345677888
Q ss_pred HHHHHHHHHHHHh-CCCE-EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcC
Q psy10669 226 KANASHLSDEMIK-RGYH-VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIA 275 (337)
Q Consensus 226 ~~na~~l~~~L~~-~G~~-v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~g 275 (337)
.+|++++++.|.+ .+++ |...+-.+| ++.+.+. +...+.+.++...
T Consensus 306 ~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~----~~~~~~~~~~~l~ 368 (430)
T 3ri6_A 306 CQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELE----SKEASYRFMDALK 368 (430)
T ss_dssp HHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC----CHHHHHHHHHhCC
Confidence 9999999999987 4666 433332333 7777775 2344555566543
No 162
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.90 E-value=3.3e-08 Score=94.54 Aligned_cols=185 Identities=10% Similarity=0.008 Sum_probs=120.3
Q ss_pred HHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------ccc-
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------NNA- 122 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------~~a- 122 (337)
++++++++|.+. .+.++||+.||..++.+++++ .+.
T Consensus 58 ~~~la~~~~~~~-----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~ 132 (386)
T 1cs1_A 58 QRALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRA 132 (386)
T ss_dssp HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHH
T ss_pred HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHH
Confidence 368899999873 688899999998888888654 000
Q ss_pred ----cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeeccC---------Cchhh
Q psy10669 123 ----RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVTKT---------GEKIL 179 (337)
Q Consensus 123 ----~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~~~---------Gg~i~ 179 (337)
++++|++..-.+ +...|+++|.++|+++|+++++|++|..|... .++++.+| ||+++
T Consensus 133 ~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~ 212 (386)
T 1cs1_A 133 ALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVI 212 (386)
T ss_dssp HHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred hhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEE
Confidence 267888763332 57889999999999999999999999987653 13333322 25555
Q ss_pred h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEe-cC--------
Q psy10669 180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVV-TG-------- 246 (337)
Q Consensus 180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~-~~-------- 246 (337)
. ++.+.+.+...+. .+++++...++...++. ...+..++..+|.+.+.+.|.+.+ +.-+ ..
T Consensus 213 ~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~ 286 (386)
T 1cs1_A 213 AKDPDVVTELAWWANNI-GVTGGAFDSYLLLRGLR-----TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGH 286 (386)
T ss_dssp ESSHHHHHHHHHHHHHH-TCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTH
T ss_pred eCcHHHHHHHHHHHHhc-CCCCCHHHHHHHHhccc-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccH
Confidence 4 3666665443221 23344444333223322 245667788999999999998753 2211 11
Q ss_pred -------CCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 247 -------GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 247 -------~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.....++.+.+.. ....+.+.|++.||.+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~ 324 (386)
T 1cs1_A 287 EIAARQQKGFGAMLSFELDG---DEQTLRRFLGGLSLFTLA 324 (386)
T ss_dssp HHHHHHCSSCCSEEEEEESS---CHHHHHHHHHTCSSSEEB
T ss_pred HHHHHhcCCCceEEEEEECC---CHHHHHHHHHhCCcceEc
Confidence 0125677777653 256778889889998863
No 163
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.90 E-value=8.9e-08 Score=93.63 Aligned_cols=242 Identities=12% Similarity=0.042 Sum_probs=143.8
Q ss_pred cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669 29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG- 105 (337)
Q Consensus 29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg- 105 (337)
....|+|...+.- .+|.|.+++...+.. +. ...|+...-..+++....+.+.+.+|.+.. . .+|.+++|
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-~-~~v~~t~G~ 127 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDI-PM-----VNQYSPTRGRPSLINSLIKLYSPIYNTELK-A-ENVTVTTGA 127 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTS-GG-----GGSCCCTTCCHHHHHHHHHHHTTTTTSCCC-G-GGEEEESHH
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhC-cC-----CCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-h-hhEEEeCCH
Confidence 3456777665533 379999998776542 11 011211111234543333455566675321 0 24777777
Q ss_pred chhHHHHHHhhCCc--------------------------------c-------------c------c-----cccEEEE
Q psy10669 106 SPANFAVCEKALPT--------------------------------N-------------N------A-----RFDFLSS 129 (337)
Q Consensus 106 t~AN~~v~~aLl~~--------------------------------~-------------~------a-----~pklII~ 129 (337)
+.|+..++.+++++ . . . ++++|++
T Consensus 128 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l 207 (447)
T 3b46_A 128 NEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVII 207 (447)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEE
Confidence 78998888988754 1 0 0 1577776
Q ss_pred cCccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC---chhh
Q psy10669 130 GTTCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG---EKIL 179 (337)
Q Consensus 130 ~~S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G---g~i~ 179 (337)
..-.+ +.. .++++|.++|+++|+++++|++|...... .+.++. | .| |+++
T Consensus 208 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~ 287 (447)
T 3b46_A 208 NTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVL 287 (447)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEE
T ss_pred eCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEE
Confidence 42222 344 36778889999999999999999753221 112222 2 23 5554
Q ss_pred h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE
Q psy10669 180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI 255 (337)
Q Consensus 180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V 255 (337)
. ++.+.+..... ....+++++..++++.++.... +...++.++++.++.++|.+.|.+.|+++.. ...+..+++
T Consensus 288 ~~~~~l~~~l~~~~~-~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~ 365 (447)
T 3b46_A 288 SLNAELLSYAAKAHT-RICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTA-PEGTYFVLV 365 (447)
T ss_dssp CSCHHHHHHHHHHHH-HHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEEC-CSBSSEEEE
T ss_pred eCCHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecC-CCeeEEEEE
Confidence 4 45555443211 1122456667777777776542 2235678888999999999999998998764 233566778
Q ss_pred EecCC--------------CcchHHHHHHHh-hcCceecc
Q psy10669 256 DLRKN--------------KLTGSKVELVLE-EIAIACNK 280 (337)
Q Consensus 256 ~~~~~--------------~~~~~~~~~~L~-~~gI~v~~ 280 (337)
++... +.+..++.+.|. +.||.+.+
T Consensus 366 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p 405 (447)
T 3b46_A 366 DFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIP 405 (447)
T ss_dssp ECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBC
T ss_pred ecccccCccccccccccccCCCHHHHHHHHHHhCCEEEEC
Confidence 87642 234556666664 68999875
No 164
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=98.90 E-value=1.3e-08 Score=100.40 Aligned_cols=186 Identities=16% Similarity=0.135 Sum_probs=116.8
Q ss_pred cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------
Q psy10669 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------- 119 (337)
Q Consensus 71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------- 119 (337)
+...+++| +++++++|.+. .+.++||+.|+..++.+++++
T Consensus 113 ~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~ 183 (445)
T 1qgn_A 113 NPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATV 183 (445)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEE
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEE
Confidence 34455665 68899999874 699999999998888988764
Q ss_pred -------cc--c---cc-cEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc--
Q psy10669 120 -------NN--A---RF-DFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK-- 173 (337)
Q Consensus 120 -------~~--a---~p-klII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~-- 173 (337)
.+ + ++ ++|++..-+ .+...|+++|.++|+++|+++++|++|..|... .++++ +|
T Consensus 184 v~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~ 263 (445)
T 1qgn_A 184 IDPADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFL 263 (445)
T ss_dssp ECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTT
T ss_pred eCCCCHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccc
Confidence 00 1 25 888876333 358889999999999999999999999988654 13333 22
Q ss_pred ---C---Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EE
Q psy10669 174 ---T---GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HV 243 (337)
Q Consensus 174 ---~---Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v 243 (337)
. +|+++. ++.+.+...... ..+++++.....+..+ + .....+.++..+|++++++.|.+. ++ .+
T Consensus 264 gg~gd~~~G~l~~~~~l~~~l~~~~~~-~g~~~~~~~a~~~~~~---l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v 337 (445)
T 1qgn_A 264 GGHNDVLAGCISGPLKLVSEIRNLHHI-LGGALNPNAAYLIIRG---M--KTLHLRVQQQNSTALRMAEILEAHPKVRHV 337 (445)
T ss_dssp TCSSSCCCEEEEECHHHHHHHHHHHHH-HCCCCCHHHHHHHHHH---G--GGHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred cccccceEEEEEECHHHHHHHHHHHHH-hCCCCCHHHHHHHHHh---H--HHHHHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 1 566654 455555432211 1122333322222222 2 234566788889999999999985 45 44
Q ss_pred ecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 244 VTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 244 ~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
...+ ....++.+.+.. ....+.+.++..
T Consensus 338 ~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~---~~~~~~~~l~~l 380 (445)
T 1qgn_A 338 YYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG---DLLTTAKFVDAL 380 (445)
T ss_dssp ECTTSSSSTTHHHHHHHCSCCCSEEEEEESS---CHHHHHHHHHHC
T ss_pred ECCCCCCCchHHHHHHhccCCCcEEEEEECC---CHHHHHHHHHhC
Confidence 4321 135677777753 223455556553
No 165
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.88 E-value=1.1e-07 Score=93.85 Aligned_cols=160 Identities=11% Similarity=0.074 Sum_probs=98.5
Q ss_pred ccEEEEcCccc---ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch----
Q psy10669 124 FDFLSSGTTCY---SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK---- 177 (337)
Q Consensus 124 pklII~~~S~~---~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~---- 177 (337)
+++||+.+... ++..+ +++|+++|+++|++||+|++|+ .|-.+ + +.+..| .||+
T Consensus 234 ~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG 313 (457)
T 3tfu_A 234 LAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLA 313 (457)
T ss_dssp EEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCE
T ss_pred EEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceE
Confidence 36777765132 22332 7889999999999999999986 33222 1 121112 1343
Q ss_pred -hhh--hHHHHHhh---c-cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecC
Q psy10669 178 -ILY--DYEEKINN---A-VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTG 246 (337)
Q Consensus 178 -i~~--~l~~~i~~---~-~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~ 246 (337)
+++ ++.+.+.. . ..-+..-+.++...++..+++..+.+ +++.+++.++.++|.+.|.+. ++..+.
T Consensus 314 ~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr- 389 (457)
T 3tfu_A 314 ATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITELAAGLTAGLDTARALPAVTDVR- 389 (457)
T ss_dssp EEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEE-
T ss_pred EEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhcCCCeeeee-
Confidence 333 56666641 1 11122234566677776666666533 367888999999999999874 232222
Q ss_pred CCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 247 GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
....++.+.+... .+..++.+.|.+.||.+.+.. .+||..+
T Consensus 390 -~~G~~~~i~l~~~-~~~~~~~~~l~~~Gv~v~~~~~~lRi~p~ 431 (457)
T 3tfu_A 390 -VCGAIGVIECDRP-VDLAVATPAALDRGVWLRPFRNLVYAMPP 431 (457)
T ss_dssp -ECSSCEEEEESSC-CCHHHHHHHHHHTTEECCCBTTEEEECCC
T ss_pred -cCCeEEEEEECCc-ccHHHHHHHHHHCCeEEEecCCEEEEECC
Confidence 2455777887654 357788888888899998644 6776543
No 166
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=98.87 E-value=3.5e-08 Score=95.57 Aligned_cols=192 Identities=15% Similarity=0.075 Sum_probs=123.6
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------ 119 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------ 119 (337)
|+...++++ +.+++++|.+. .+.++||+.|+..++.+++++
T Consensus 60 ~~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~ 130 (404)
T 1e5e_A 60 GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVD 130 (404)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEE
T ss_pred cChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEE
Confidence 445556666 57889999863 588899999998888888754
Q ss_pred --------cc--c---cccEEEEc-Ccc-cccccChHHHHHHhhh-cCCeEEEeccccccccc--------eeeeec-c-
Q psy10669 120 --------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQICDE-TDSIMFADMSHISGLIA--------GVKGVT-K- 173 (337)
Q Consensus 120 --------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~--------g~~~T~-~- 173 (337)
.+ + ++|+|++. +++ .+...|+++|.++|++ +|+++++|++|..+... .++.+. |
T Consensus 131 ~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~ 210 (404)
T 1e5e_A 131 FINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKY 210 (404)
T ss_dssp EECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTT
T ss_pred EECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccc
Confidence 00 0 25777775 333 3588899999999999 99999999999987742 123332 2
Q ss_pred ----C---Cchhhh--hHHH-HHhhccCCCC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-C
Q psy10669 174 ----T---GEKILY--DYEE-KINNAVFPSL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-Y 241 (337)
Q Consensus 174 ----~---Gg~i~~--~l~~-~i~~~~~p~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~ 241 (337)
. ||+++. ++.+ .+.+... .. .++.++...++...++. ..+.+.++..+|++.+++.|.+.. +
T Consensus 211 ~~~~g~ri~G~~~~~~~~~~~~l~~~~~-~~~g~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~v 284 (404)
T 1e5e_A 211 INGHTDVVAGLICGKADLLQQIRMVGIK-DITGSVISPHDAWLITRGLS-----TLNIRMKAESENAMKVAEYLKSHPAV 284 (404)
T ss_dssp TTCSSCCCCEEEEECHHHHHHHHHTCCC-CCCCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred cCCCCCCeEEEEEECHHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHhHh-----HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 1 466655 4544 6665533 33 23445444444333432 235667788899999999998763 2
Q ss_pred E-EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669 242 H-VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279 (337)
Q Consensus 242 ~-v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~ 279 (337)
. +.... ....++.+++.. ....+.+.|++.||.+.
T Consensus 285 ~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~i~~~ 335 (404)
T 1e5e_A 285 EKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS---GFEGAKKLLDNLKLITL 335 (404)
T ss_dssp EEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHHTCSSSEE
T ss_pred eEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC---CHHHHHHHHHhCCCcee
Confidence 1 11110 125566667653 23557788888898555
No 167
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.87 E-value=5.5e-08 Score=93.52 Aligned_cols=241 Identities=17% Similarity=0.144 Sum_probs=141.7
Q ss_pred cceeeeccC-----C-CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC------------CC
Q psy10669 31 NGIELIASE-----N-FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN------------LD 92 (337)
Q Consensus 31 ~~i~l~ase-----n-~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg------------~~ 92 (337)
..|.|...+ + ..+|.|.+++...+......+ |.-.....+++ +.++++++ .+
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~lr----~~la~~~~~~~~~~~~~~~~~~ 103 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNG------YFPTVGSPEAR----EAVATWWRNSFVHKEELKSTIV 103 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSS------CCCTTCCHHHH----HHHHHHHHHHHCCSTTTGGGCC
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCC------cCCCCCCHHHH----HHHHHHHHhhhcccccCCCCCC
Confidence 346665543 2 348999999987654311111 21111223444 34455555 33
Q ss_pred CCCCcceeecCCC-chhHHHHHHhhCCc--------------------------------c---------c--c---ccc
Q psy10669 93 PEQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------N---------N--A---RFD 125 (337)
Q Consensus 93 ~~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------~---------~--a---~pk 125 (337)
. -+|.+++| +.|+..++.+++++ + + + +++
T Consensus 104 ~----~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 179 (416)
T 1bw0_A 104 K----DNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTK 179 (416)
T ss_dssp G----GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEE
T ss_pred c----ceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCe
Confidence 3 25777676 67888888888754 0 0 0 145
Q ss_pred EEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccc----cc-----c-c----------eeeeeccC------
Q psy10669 126 FLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHIS----GL-----I-A----------GVKGVTKT------ 174 (337)
Q Consensus 126 lII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~----Gl-----i-~----------g~~~T~~~------ 174 (337)
+|++. +++ .+...| +++|.++|+++|+++++|++|.. |- . . .+++|..|
T Consensus 180 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 259 (416)
T 1bw0_A 180 LLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPG 259 (416)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGG
T ss_pred EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCC
Confidence 55554 433 246677 77888999999999999999986 21 1 1 01233322
Q ss_pred --Cchhhh-h---HHH----HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669 175 --GEKILY-D---YEE----KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHV 243 (337)
Q Consensus 175 --Gg~i~~-~---l~~----~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v 243 (337)
.|+++. + +.+ .+.... ....++++...+++..++.......+++.++++.++.++|.+.|.+. |+++
T Consensus 260 lr~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 337 (416)
T 1bw0_A 260 WRLGWLLYVDPHGNGPSFLEGLKRVG--MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAP 337 (416)
T ss_dssp GCCEEEEEECTTCSCHHHHHHHHHHH--HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred ceEEEEEeeCchhhHHHHHHHHHHHh--ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 245543 2 222 222110 01235677777777777654323345778889999999999999885 8887
Q ss_pred ecCCCCCeEEEEEecCC----CcchHHHHHHH-hhcCceeccCc------ccchhh
Q psy10669 244 VTGGTDVHLILIDLRKN----KLTGSKVELVL-EEIAIACNKNT------GISLAA 288 (337)
Q Consensus 244 ~~~~t~~h~v~V~~~~~----~~~~~~~~~~L-~~~gI~v~~~~------girig~ 288 (337)
..+ ..+..+++.+... ..+..++...| ++.||.+.+.. .+||+.
T Consensus 338 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~ 392 (416)
T 1bw0_A 338 TMP-RGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT 392 (416)
T ss_dssp CCC-CBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC
T ss_pred cCC-CeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe
Confidence 642 3344566766431 13566666666 67899997632 477765
No 168
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.87 E-value=2.1e-08 Score=96.54 Aligned_cols=226 Identities=12% Similarity=0.030 Sum_probs=134.0
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~ 111 (337)
...+..|..|..+...+ +...+... ..++.-+|+ ++....++| +++++++|.+. .+.++||+.|+..
T Consensus 23 ~~pi~~~~~~~~~~~~~-~~~~~~~~-~~~~~y~~~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~ 89 (389)
T 3acz_A 23 AYPIFQTSTFCFDSTQQ-GADLFMGK-GEGHIYSRL--GNPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISS 89 (389)
T ss_dssp SCCBCCCSBBCCSSHHH-HHHHHTTC-SSCCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred CCCcccCCceecCChHH-HHHhhcCC-CCCcccCCC--CChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHH
Confidence 34566666776433322 11122211 123322332 344455666 58889999874 6888999999998
Q ss_pred HHHhhCCc----------------------------------------ccc---cccEEEEcCcc--cccccChHHHHHH
Q psy10669 112 VCEKALPT----------------------------------------NNA---RFDFLSSGTTC--YSRCLDYARFRQI 146 (337)
Q Consensus 112 v~~aLl~~----------------------------------------~~a---~pklII~~~S~--~~~~~d~~~l~ei 146 (337)
++.+++++ +.+ ++++|++..-+ .+...|+++|.++
T Consensus 90 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~ 169 (389)
T 3acz_A 90 STLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVV 169 (389)
T ss_dssp HHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHH
Confidence 88888654 001 25788775333 3578899999999
Q ss_pred hhhcCCeEEEeccccccccc--------eeeeec-c-----C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHH
Q psy10669 147 CDETDSIMFADMSHISGLIA--------GVKGVT-K-----T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAI 206 (337)
Q Consensus 147 a~~~ga~l~vD~AH~~Gli~--------g~~~T~-~-----~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaal 206 (337)
|+++|+++++|++|..|... .++.+. | . ||+++. ++.+.+.+...+ ..+++++...++.
T Consensus 170 ~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~ 248 (389)
T 3acz_A 170 CHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKD-AGSLMAPMDAFLC 248 (389)
T ss_dssp HHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH-HCCCCCHHHHHHH
T ss_pred HHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHh-cCCCCCHHHHHHH
Confidence 99999999999999988743 233332 3 1 466654 455555543221 1222333222222
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC-E-EecCC---------------CCCeEEEEEecCCCcchHHHHH
Q psy10669 207 ATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY-H-VVTGG---------------TDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 207 a~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~-~-v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
..++ ...+.+.++..+|++.+++.|.+.+. . +...+ ....++.+.+. + ...+.+
T Consensus 249 ~~~l-----~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--~--~~~~~~ 319 (389)
T 3acz_A 249 ARGM-----KTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--S--FEAAKK 319 (389)
T ss_dssp HHHH-----TTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--S--HHHHHH
T ss_pred HcCc-----cHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--C--HHHHHH
Confidence 2222 13456678888999999999988531 1 11110 12456666664 2 567788
Q ss_pred HHhhcCceecc
Q psy10669 270 VLEEIAIACNK 280 (337)
Q Consensus 270 ~L~~~gI~v~~ 280 (337)
.|++.||.+..
T Consensus 320 ~l~~~~i~~~~ 330 (389)
T 3acz_A 320 LMEHLKVCTLA 330 (389)
T ss_dssp HHTTCSSSEEB
T ss_pred HHHhCCCcEEC
Confidence 88888988764
No 169
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.86 E-value=5.5e-08 Score=95.49 Aligned_cols=227 Identities=9% Similarity=-0.007 Sum_probs=131.7
Q ss_pred CCHHHHHHHhhhhhhcc--CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCC
Q psy10669 42 TSLAVLECLGSCLQNKY--SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALP 118 (337)
Q Consensus 42 ~~p~V~~a~~~~l~~~y--~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~ 118 (337)
.++.+.+++...+.+.. ..+|+. ..-..+++....+.+.+.+|.+ +. .+|.+++| ++|+..++.++++
T Consensus 92 p~~~v~~a~~~~l~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~-~~--~~v~~t~G~~~al~~~~~~l~~ 162 (448)
T 3aow_A 92 PKEIIRDILVEIMEKYADKALQYGT------TKGFTPLRETLMKWLGKRYGIS-QD--NDIMITSGSQQALDLIGRVFLN 162 (448)
T ss_dssp CHHHHHHHHHHHHHHSHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCC-TT--SEEEEESSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhhhHHHhCCCC------CCCcHHHHHHHHHHHHHhcCcC-Ch--hhEEEeCcHHHHHHHHHHHHcC
Confidence 36778888876544310 012211 1112344432233444445873 11 26777777 6788888888876
Q ss_pred c------------------------------------------cc-----c--cccEEEEcC--cc-cccccC---hHHH
Q psy10669 119 T------------------------------------------NN-----A--RFDFLSSGT--TC-YSRCLD---YARF 143 (337)
Q Consensus 119 ~------------------------------------------~~-----a--~pklII~~~--S~-~~~~~d---~~~l 143 (337)
+ .+ . +||+|++-+ .+ .+...+ +++|
T Consensus 163 ~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i 242 (448)
T 3aow_A 163 PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYL 242 (448)
T ss_dssp TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHH
Confidence 4 11 2 367774422 12 244555 4567
Q ss_pred HHHhhhcCCeEEEeccccccccce----------------eeeeccC----C---chhhh--hHHHHHhhccCCCCCCCC
Q psy10669 144 RQICDETDSIMFADMSHISGLIAG----------------VKGVTKT----G---EKILY--DYEEKINNAVFPSLQGGP 198 (337)
Q Consensus 144 ~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~~~----G---g~i~~--~l~~~i~~~~~p~~~g~~ 198 (337)
.++|+++|+++++|++|..+...| ..+|..| | |+++. ++.+.+.....+..+ ++
T Consensus 243 ~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~~~~~~-~~ 321 (448)
T 3aow_A 243 LELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDL-CT 321 (448)
T ss_dssp HHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHS-SC
T ss_pred HHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHHHHHHHhcC-CC
Confidence 789999999999999998754321 2233322 3 66654 465555433222223 34
Q ss_pred cHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhC---CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669 199 HNHAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIKR---GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274 (337)
Q Consensus 199 ~~~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~~---G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~ 274 (337)
++...+++..++... .....++.+++..++.++|.+.|.+. |+++..+ .....+++.+.. +.+..++.+.|.+.
T Consensus 322 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p-~~g~~~~v~~~~-~~~~~~l~~~l~~~ 399 (448)
T 3aow_A 322 NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKP-EGGMFIWVTLPD-GIDSKKMLERAIKK 399 (448)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCC-SBSSEEEEECST-TCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCC-CccEEEEEEcCC-CCCHHHHHHHHHHC
Confidence 555555555555431 01223556677778999999999874 7887542 335577888854 45677777777777
Q ss_pred Cceecc
Q psy10669 275 AIACNK 280 (337)
Q Consensus 275 gI~v~~ 280 (337)
||.+.+
T Consensus 400 gV~v~p 405 (448)
T 3aow_A 400 GVAYVP 405 (448)
T ss_dssp TEECEE
T ss_pred CcEEEc
Confidence 999875
No 170
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.86 E-value=8e-08 Score=93.37 Aligned_cols=156 Identities=11% Similarity=0.102 Sum_probs=92.5
Q ss_pred ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CC----c
Q psy10669 124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TG----E 176 (337)
Q Consensus 124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~G----g 176 (337)
+++|++.+ +++ ...+ +++|.++|+++|++|++|++|+ |+ .+ + +.+..| .+ |
T Consensus 202 ~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~riG 279 (439)
T 3dxv_A 202 IGAAFIEP-IQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLS 279 (439)
T ss_dssp EEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEEEECGGGGTTSCCE
T ss_pred EEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEEEEcchhcCCcceE
Confidence 35777764 443 3444 7889999999999999999997 43 11 1 121112 12 4
Q ss_pred hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCC
Q psy10669 177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTD 249 (337)
Q Consensus 177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~ 249 (337)
+++. ++.+.+.+......+ .++...++...++..+.+ +++.+++.++.+++.+.|.+. + +..+. ..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~ 352 (439)
T 3dxv_A 280 AVIAPAEILDCASAFAMQTLH--GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLSELAKRHPLIGDIR--GR 352 (439)
T ss_dssp EEEEEHHHHTSCSSSSCCTTT--TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EE
T ss_pred EEEECHHHHhhhcCCCcCCCc--ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--EE
Confidence 4443 455555443222222 556666666666665532 467888888999998888763 2 22222 23
Q ss_pred CeEEEEEecC-------CCcchHHHHHHHhhcCceeccCc----ccchhh
Q psy10669 250 VHLILIDLRK-------NKLTGSKVELVLEEIAIACNKNT----GISLAA 288 (337)
Q Consensus 250 ~h~v~V~~~~-------~~~~~~~~~~~L~~~gI~v~~~~----girig~ 288 (337)
..++.+++.. .+....++.+.|.+.||.+.+.. .+||..
T Consensus 353 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~ 402 (439)
T 3dxv_A 353 GLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTP 402 (439)
T ss_dssp TTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECC
T ss_pred EEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEEC
Confidence 4466666631 22235566677777799987532 577753
No 171
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.86 E-value=5.1e-08 Score=95.31 Aligned_cols=153 Identities=13% Similarity=0.177 Sum_probs=95.2
Q ss_pred ccEEEEcCccc---ccc---cChHHHHHHhhhcCCeEEEeccccc-----------cccc---------------eeeee
Q psy10669 124 FDFLSSGTTCY---SRC---LDYARFRQICDETDSIMFADMSHIS-----------GLIA---------------GVKGV 171 (337)
Q Consensus 124 pklII~~~S~~---~~~---~d~~~l~eia~~~ga~l~vD~AH~~-----------Gli~---------------g~~~T 171 (337)
+++|++....+ +.. .++++|.++|+++|++|++|++|.. |..+ .++++
T Consensus 184 ~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s 263 (467)
T 1ax4_A 184 IVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMS 263 (467)
T ss_dssp EEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEE
T ss_pred eeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEe
Confidence 35777753332 233 3456788999999999999999876 2211 12223
Q ss_pred c-c-----CCchhhh----hHHHHHhhc--cCCC--CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669 172 T-K-----TGEKILY----DYEEKINNA--VFPS--LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 172 ~-~-----~Gg~i~~----~l~~~i~~~--~~p~--~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~ 237 (337)
. | .||+++. ++.+.+... .+++ ..++.....+++++.++.++.+ +++.++..++.++|.+.|.
T Consensus 264 ~sK~~g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~ 340 (467)
T 1ax4_A 264 AKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLR 340 (467)
T ss_dssp TTSTTCCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHH
Confidence 2 2 3676653 454443321 0122 2345555666666666666532 2345556688999999999
Q ss_pred hCCCEEecCCCCCeEEEEE-------ecCCCcchHHHHHHH-hhcCceecc
Q psy10669 238 KRGYHVVTGGTDVHLILID-------LRKNKLTGSKVELVL-EEIAIACNK 280 (337)
Q Consensus 238 ~~G~~v~~~~t~~h~v~V~-------~~~~~~~~~~~~~~L-~~~gI~v~~ 280 (337)
+.|+++.. ...++.++++ +...+.+..++.+.| ++.||.+.+
T Consensus 341 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~ 390 (467)
T 1ax4_A 341 EAGIPIQY-PTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVE 390 (467)
T ss_dssp HTTCCBCS-SCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEE
T ss_pred hCCCCccc-CCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeee
Confidence 98888763 3456778887 432344567788888 888999875
No 172
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.85 E-value=1.9e-07 Score=92.44 Aligned_cols=159 Identities=12% Similarity=0.035 Sum_probs=96.5
Q ss_pred cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEecccc-ccccc---------ee---eeec-c--CCc-----
Q psy10669 125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHI-SGLIA---------GV---KGVT-K--TGE----- 176 (337)
Q Consensus 125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g~---~~T~-~--~Gg----- 176 (337)
++||+. +++++.+. +++|+++|+++|++||+|+.|+ .|-.+ ++ ..|. | .||
T Consensus 223 aavi~e-p~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg 301 (476)
T 3i5t_A 223 AAFLAE-PILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLG 301 (476)
T ss_dssp EEEEEC-SSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSCCE
T ss_pred EEEEEC-CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcCeE
Confidence 567775 46655433 7889999999999999999997 33222 11 1111 2 133
Q ss_pred hhhh--hHHHHHhhc------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC----CEEe
Q psy10669 177 KILY--DYEEKINNA------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG----YHVV 244 (337)
Q Consensus 177 ~i~~--~l~~~i~~~------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~ 244 (337)
++++ ++.+.+.+. ..-+.+-+.++...++..+++..+.+ +++.+++.++.+++++.|.+.+ +..+
T Consensus 302 ~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v 378 (476)
T 3i5t_A 302 GLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFAAALASLRDLPGVAET 378 (476)
T ss_dssp EEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEE
T ss_pred EEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 3433 566666542 12222335566777777777766532 4678899999999999998642 2222
Q ss_pred cCCCCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 245 TGGTDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 245 ~~~t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
. ....++.+++..... ....+.+.|.+.||.+.+.. -|||..+
T Consensus 379 ~--~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~ 432 (476)
T 3i5t_A 379 R--SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLGDLCVISPP 432 (476)
T ss_dssp E--EETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEETTEEEECCC
T ss_pred E--ecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecCCEEEEECC
Confidence 2 233466677754321 14456677777799987643 5777544
No 173
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=98.84 E-value=9e-08 Score=95.60 Aligned_cols=173 Identities=13% Similarity=0.071 Sum_probs=106.7
Q ss_pred cCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhC----------------C-c----------
Q psy10669 68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKAL----------------P-T---------- 119 (337)
Q Consensus 68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl----------------~-~---------- 119 (337)
|.......++|..+++.+++++|.+. .++.+++| |.||+.++.++. + .
T Consensus 140 ~~~s~~~~~le~~~~~~la~l~g~~~----~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 140 YEIAPVFVLMEEEVLRKLRALVGWSS----GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCSS----CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhchHHHHHHHHHHHHHHHHhCCCC----CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 33345567889888999999999974 35666555 888877666541 1 1
Q ss_pred -------------------------------c--cc-------cccEEEEcCc--ccccccChHHHHHHhhhcCCeEEEe
Q psy10669 120 -------------------------------N--NA-------RFDFLSSGTT--CYSRCLDYARFRQICDETDSIMFAD 157 (337)
Q Consensus 120 -------------------------------~--~a-------~pklII~~~S--~~~~~~d~~~l~eia~~~ga~l~vD 157 (337)
+ +. +|++|+++.. ..+...|+++|.++|+++|++++||
T Consensus 216 ~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD 295 (515)
T 2jis_A 216 IQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVD 295 (515)
T ss_dssp HHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEe
Confidence 0 00 1567777632 3568889999999999999999999
Q ss_pred ccccccccc---------e------eeeeccC------C-chhhh--h--HHHHHhhccCCCCCC------------CC-
Q psy10669 158 MSHISGLIA---------G------VKGVTKT------G-EKILY--D--YEEKINNAVFPSLQG------------GP- 198 (337)
Q Consensus 158 ~AH~~Gli~---------g------~~~T~~~------G-g~i~~--~--l~~~i~~~~~p~~~g------------~~- 198 (337)
+||+.|.+. + ++++.|| | |+++. + +.+.......|++.+ ++
T Consensus 296 ~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 375 (515)
T 2jis_A 296 AAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKV 375 (515)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGC
T ss_pred hhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCC
Confidence 999988764 1 2233232 2 44433 3 433211111111110 00
Q ss_pred -----cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec
Q psy10669 199 -----HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT 245 (337)
Q Consensus 199 -----~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~ 245 (337)
.... .++..++..+....++++.++..+++++|++.|.+ .|++++.
T Consensus 376 ~~~~rr~~a-l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~ 427 (515)
T 2jis_A 376 VQCGRRVDC-LKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVM 427 (515)
T ss_dssp SCSSCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred CCCCCcccH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 0001 12222233333356788899999999999999998 4999986
No 174
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=98.83 E-value=1.3e-07 Score=90.59 Aligned_cols=155 Identities=6% Similarity=-0.021 Sum_probs=90.8
Q ss_pred ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c---CC---ch
Q psy10669 124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K---TG---EK 177 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~---~G---g~ 177 (337)
+++|++. +++ .+...| +++|.++|+++|+++++|++|...+-+ .+++|. | .| |+
T Consensus 181 ~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~ 260 (417)
T 3g7q_A 181 TGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGI 260 (417)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEE
T ss_pred ceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechhccCCCcceEE
Confidence 3555554 333 346677 667778899999999999999742111 123333 2 12 55
Q ss_pred hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-chhhHH-HHHHHHHHHHHHHHHHHhC----CCEEecCCCC
Q psy10669 178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-SDEFKS-YQAQVKANASHLSDEMIKR----GYHVVTGGTD 249 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-~~~~~~-y~~~v~~na~~l~~~L~~~----G~~v~~~~t~ 249 (337)
++. ++.+.+......... ++++...++++..+.... .....+ .++++.++.+.+.+.|.+. |+++... ..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~ 338 (417)
T 3g7q_A 261 IIANDKTITAIANMNGIISL-APGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKP-EG 338 (417)
T ss_dssp EECCHHHHHHHHHHHHHHCC-CCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECC-CB
T ss_pred EEeCHHHHHHHHHhhcceee-CCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCC-Cc
Confidence 554 466655433221212 233344444444333210 011112 4556667777777777662 6777642 44
Q ss_pred CeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 250 VHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
+..+++++...+.+..++.+.|.+.||.+.+
T Consensus 339 g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~ 369 (417)
T 3g7q_A 339 AIFLWLWFKDLPITTELLYQRLKARGVLMVP 369 (417)
T ss_dssp SSEEEEECTTCSSCHHHHHHHHHHTTEECEE
T ss_pred ceEEEEEcCCCCCCHHHHHHHHHHCCEEEEC
Confidence 5677788876566888899999989999875
No 175
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.83 E-value=8.1e-08 Score=93.30 Aligned_cols=153 Identities=8% Similarity=0.025 Sum_probs=94.1
Q ss_pred ccEEEEcCcc--cccccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCchh
Q psy10669 124 FDFLSSGTTC--YSRCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEKI 178 (337)
Q Consensus 124 pklII~~~S~--~~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~i 178 (337)
+++|++.+.. -+...| +++|+++|+++|++|++|++|+ |+.. + +.+..| .+|++
T Consensus 204 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~v 282 (434)
T 2epj_A 204 IAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGLEGAQGYFNIEGDIIVLGKIIGGGFPVGAV 282 (434)
T ss_dssp EEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSSTTHHHHHHTCCCSEEEEEGGGGTTSSCEEE
T ss_pred EEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCcchhhHHhCCCCCeeeecchhcCCcceeee
Confidence 3577776532 245566 8899999999999999999998 5521 1 111112 23444
Q ss_pred hh--hHHHHHhhcc--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEE-ecCCCC
Q psy10669 179 LY--DYEEKINNAV--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHV-VTGGTD 249 (337)
Q Consensus 179 ~~--~l~~~i~~~~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v-~~~~t~ 249 (337)
+. ++.+.+.+.. +.+.+-+.++...++...++..+.+ +++.+++.++.++|.+.|.+. |+.. +. ..
T Consensus 283 ~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~ 357 (434)
T 2epj_A 283 AGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTGLPYTIN--RV 357 (434)
T ss_dssp EECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE--EE
T ss_pred eecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE--Ee
Confidence 43 4544444311 1111113566677777677766532 356788889999999998773 6532 22 23
Q ss_pred CeEEEEEecCC------------CcchHHHHHHHhhcCceeccCc
Q psy10669 250 VHLILIDLRKN------------KLTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 250 ~h~v~V~~~~~------------~~~~~~~~~~L~~~gI~v~~~~ 282 (337)
..++++.+... .....++.+.|.+.||.+.+..
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 402 (434)
T 2epj_A 358 ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSN 402 (434)
T ss_dssp TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSST
T ss_pred eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccC
Confidence 45777887641 1234567777778899998643
No 176
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.83 E-value=1.6e-07 Score=90.49 Aligned_cols=157 Identities=13% Similarity=0.117 Sum_probs=94.1
Q ss_pred EEEEc-C-cc-cccccChHHHHHHhh---------hcCCeEEEeccccccccc---------------------eeeeec
Q psy10669 126 FLSSG-T-TC-YSRCLDYARFRQICD---------ETDSIMFADMSHISGLIA---------------------GVKGVT 172 (337)
Q Consensus 126 lII~~-~-S~-~~~~~d~~~l~eia~---------~~ga~l~vD~AH~~Gli~---------------------g~~~T~ 172 (337)
+|++. + .+ .+...|.+++.+|++ ++|+++++|++|.- +.. .++++.
T Consensus 182 ~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 260 (418)
T 3rq1_A 182 VVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLD-YSGEKDEVRAFFNKFSHLPKEILTCVCYSL 260 (418)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGG-GSSCHHHHHGGGGGGTTCCTTEEEEEEEES
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccc-ccCChHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 56654 4 23 367888777775554 89999999999832 111 012233
Q ss_pred -c----CC---chhhh-----hHHHHHhhcc---CCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHH
Q psy10669 173 -K----TG---EKILY-----DYEEKINNAV---FPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASH 231 (337)
Q Consensus 173 -~----~G---g~i~~-----~l~~~i~~~~---~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~ 231 (337)
| .| |+++. ++.+.+.... .-+..++++....+++..++... ...+.+++++++.++.++
T Consensus 261 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (418)
T 3rq1_A 261 SKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADI 340 (418)
T ss_dssp TTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 12 55543 4555444321 00112345566666655554321 011223567788889999
Q ss_pred HHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccchhh
Q psy10669 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISLAA 288 (337)
Q Consensus 232 l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-girig~ 288 (337)
+.+.|.+.|+++... ..+..+++++. +..++.+.|.+.||.+.+.. .+||+.
T Consensus 341 l~~~L~~~g~~~~~~-~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~iRis~ 393 (418)
T 3rq1_A 341 FKQEAAQVGLPMLPY-RGGFFITIPTD----SANAICEELKKEHIYVIALANGIRIAA 393 (418)
T ss_dssp HHHHHHHHTCCCCCC-CSSSEEEEECT----THHHHHHHHHHTTEECEECSSEEEEEG
T ss_pred HHHHHHhcCCCCCCC-CceEEEEcCCC----CHHHHHHHHHhCCEEEecCCCCeEEEE
Confidence 999999889887652 22334455552 56778888999999998755 789874
No 177
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.82 E-value=9.6e-08 Score=92.39 Aligned_cols=162 Identities=9% Similarity=0.044 Sum_probs=100.2
Q ss_pred ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc------------------------eeeeeccC
Q psy10669 124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA------------------------GVKGVTKT 174 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------------------g~~~T~~~ 174 (337)
+++|++. +.+ .+...| +++|.++|+++|+++++|++|..+... .+..|.+|
T Consensus 189 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK 268 (428)
T 1iay_A 189 VKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSK 268 (428)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTT
T ss_pred eEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchh
Confidence 4555544 433 467788 778889999999999999999863221 01233322
Q ss_pred -----C---chhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCCC
Q psy10669 175 -----G---EKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKRGY 241 (337)
Q Consensus 175 -----G---g~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~G~ 241 (337)
| |+++. ++.+.+.....+ .+.+.+..+++..++... .+...++.++++.++.++|.+.|.+.|+
T Consensus 269 ~~g~~Glr~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 345 (428)
T 1iay_A 269 DMGLPGFRVGIIYSFNDDVVNCARKMSSF---GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGI 345 (428)
T ss_dssp TSSCGGGCEEEEEESCHHHHHHHHHHHTT---SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCCceEEEEEeCCHHHHHHHHHHHhc---ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 44443 466655543322 234556666555554332 1113466788889999999999999898
Q ss_pred EEecCCCCCeEEEEEecCCC-----cchHHHHHHHhh-cCceeccCc--------ccchhhh
Q psy10669 242 HVVTGGTDVHLILIDLRKNK-----LTGSKVELVLEE-IAIACNKNT--------GISLAAE 289 (337)
Q Consensus 242 ~v~~~~t~~h~v~V~~~~~~-----~~~~~~~~~L~~-~gI~v~~~~--------girig~~ 289 (337)
++..+ ..+..+++++.... .+..++.+.|.+ +||.+.+.. .+||+..
T Consensus 346 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~ 406 (428)
T 1iay_A 346 KCLKN-NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA 406 (428)
T ss_dssp CBCCC-SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS
T ss_pred cccCC-CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe
Confidence 87642 24556778876421 134456666665 599987632 4777653
No 178
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.82 E-value=4e-07 Score=88.24 Aligned_cols=156 Identities=6% Similarity=0.018 Sum_probs=93.6
Q ss_pred cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc---ccccc-----e----eeeecc------CCchhh
Q psy10669 125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI---SGLIA-----G----VKGVTK------TGEKIL 179 (337)
Q Consensus 125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~---~Gli~-----g----~~~T~~------~Gg~i~ 179 (337)
++||+.+ .++ ...+ +++|+++|+++|++|++|++|+ .|-.. + +.+..| .-|+++
T Consensus 204 ~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~~~ 282 (434)
T 3l44_A 204 AAILVEP-IVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALGKVIGGGLPIGAYG 282 (434)
T ss_dssp EEEEECS-SBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEEGGGGTTSSCEEEE
T ss_pred EEEEEcC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCeeehhhhhcCCcCeeeEE
Confidence 5677764 433 3444 7889999999999999999996 22211 1 111112 113333
Q ss_pred h--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCE-EecCCCCC
Q psy10669 180 Y--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYH-VVTGGTDV 250 (337)
Q Consensus 180 ~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~-v~~~~t~~ 250 (337)
. ++.+.+.+. .+-+...+.++...++..+++..+.+ +++.+++.++.+++++.|.+ .++. .+. ...
T Consensus 283 ~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~g 357 (434)
T 3l44_A 283 GKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITLN--RLK 357 (434)
T ss_dssp ECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE--EET
T ss_pred EcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE--eec
Confidence 3 465555432 12222335666777777677766532 46788888899999888876 2432 121 345
Q ss_pred eEEEEEecCCCc------------chHHHHHHHhhcCceeccCc--ccch
Q psy10669 251 HLILIDLRKNKL------------TGSKVELVLEEIAIACNKNT--GISL 286 (337)
Q Consensus 251 h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~~~--giri 286 (337)
.++.+.+..... ...++.+.|.+.||.+.+.. .+|+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl 407 (434)
T 3l44_A 358 GALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFL 407 (434)
T ss_dssp TEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEEC
T ss_pred cEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcEEE
Confidence 567777643221 22556677777899998654 5676
No 179
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.82 E-value=3.6e-07 Score=89.73 Aligned_cols=159 Identities=12% Similarity=0.098 Sum_probs=94.9
Q ss_pred cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC-----ch
Q psy10669 125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG-----EK 177 (337)
Q Consensus 125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G-----g~ 177 (337)
++||+.+ +++..+. +++|+++|+++|++||+|++|+ .|-.+ ++ ..|. | .| |+
T Consensus 223 aaii~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~ 301 (460)
T 3gju_A 223 AAFIGEP-ILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSG 301 (460)
T ss_dssp EEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEE
T ss_pred EEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCeEE
Confidence 5777764 6654433 7789999999999999999998 44332 11 1122 2 12 33
Q ss_pred hhh--hHHHHHhh------ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--C---CCEEe
Q psy10669 178 ILY--DYEEKINN------AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--R---GYHVV 244 (337)
Q Consensus 178 i~~--~l~~~i~~------~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~---G~~v~ 244 (337)
+++ ++.+.+.. ...-+..-+.++...++..+++..+.+ +++.+++.++.+++++.|.+ . ++..+
T Consensus 302 v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 378 (460)
T 3gju_A 302 VIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE---MDLVTNAGETGAYFRAELAKAVGGHKNVGEV 378 (460)
T ss_dssp EEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred EEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 433 56666642 112122334566677777677766532 35678888888888888854 1 22222
Q ss_pred cCCCCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669 245 TGGTDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT---GISLAAE 289 (337)
Q Consensus 245 ~~~t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~---girig~~ 289 (337)
. ....++.+.+..... ...++.+.|.+.||.+.+.. .|||..+
T Consensus 379 ~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~ 434 (460)
T 3gju_A 379 R--GDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPP 434 (460)
T ss_dssp E--EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCC
T ss_pred e--eeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECC
Confidence 2 233456666653210 14567777777899987642 5777644
No 180
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=98.81 E-value=1.8e-07 Score=90.02 Aligned_cols=160 Identities=11% Similarity=0.078 Sum_probs=99.2
Q ss_pred cEEEEcCc--ccccccC----hHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc---CC---chh
Q psy10669 125 DFLSSGTT--CYSRCLD----YARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK---TG---EKI 178 (337)
Q Consensus 125 klII~~~S--~~~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~---~G---g~i 178 (337)
++|++.++ +-+...+ +++|.++|+++|++|++|++|+ |+. + + +.+..| -| |++
T Consensus 201 ~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~s~sK~~~~GlriG~~ 279 (426)
T 1sff_A 201 AAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGV 279 (426)
T ss_dssp EEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEEEECGGGGTSSCCEEE
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEEEEcccccCCCceEEE
Confidence 57777542 3344556 8889999999999999999999 542 1 1 111112 13 555
Q ss_pred hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEec-CCCCCeEE
Q psy10669 179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVT-GGTDVHLI 253 (337)
Q Consensus 179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~-~~t~~h~v 253 (337)
+. ++.+.+....... .-++++...+++..++..+.+ .++.+++.++.+++.+.|.+.+ +..+. ......++
T Consensus 280 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~ 355 (426)
T 1sff_A 280 TGRAEVMDAVAPGGLGG-TYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMI 355 (426)
T ss_dssp EEEHHHHTTSCTTSBCC-SSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEE
T ss_pred EEcHHHHhhhccCCcCc-CCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEE
Confidence 44 4544444321111 224567777777777776643 2567888899999999988732 32111 01236678
Q ss_pred EEEecC-------CCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669 254 LIDLRK-------NKLTGSKVELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 254 ~V~~~~-------~~~~~~~~~~~L~~~gI~v~~~~----girig~~ 289 (337)
++++.. .+.+..++.+.|.+.||.+.+.. .|||+..
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~ 402 (426)
T 1sff_A 356 AIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVP 402 (426)
T ss_dssp EEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCC
T ss_pred EEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECC
Confidence 888853 22346677777878899987633 5788643
No 181
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=98.81 E-value=3e-07 Score=88.03 Aligned_cols=230 Identities=13% Similarity=0.036 Sum_probs=130.6
Q ss_pred ceeeeccC--CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669 32 GIELIASE--NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109 (337)
Q Consensus 32 ~i~l~ase--n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN 109 (337)
-+++-..+ -.+++.|++++. .| + +. +.+|...++..+++||++.+++ .+.+.||+.|+
T Consensus 30 v~~~~~~~~~~~~~~~v~~a~~-----~~--~--------~~---~~~~~~~~~~~a~~~g~~~~~~--~~~~~ggt~a~ 89 (374)
T 2aeu_A 30 LYDLSGLSGGFLIDEKDKALLN-----TY--I--------GS---SYFAEKVNEYGLKHLGGDENDK--CVGFNRTSSAI 89 (374)
T ss_dssp CEECSSCCCCCCCCHHHHHHHT-----ST--T--------HH---HHHHHHHHHHHHHHHTCCTTEE--EEEESSHHHHH
T ss_pred eeeecccCCCCCCCHHHHHHHH-----Hh--c--------Cc---hHHHHHHHHHHHHHhCCCCcce--EEEEcChHHHH
Confidence 34444433 355999999985 12 1 11 2333444456688999842112 46667779999
Q ss_pred HHHHHhhCCc-------------------------------------ccc-cccE-EEEcCcccc---cccChHHHHHHh
Q psy10669 110 FAVCEKALPT-------------------------------------NNA-RFDF-LSSGTTCYS---RCLDYARFRQIC 147 (337)
Q Consensus 110 ~~v~~aLl~~-------------------------------------~~a-~pkl-II~~~S~~~---~~~d~~~l~eia 147 (337)
..++.++ +. +.. ++++ |++...+++ ...|+++|.++|
T Consensus 90 ~~~~~~~-~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~ 168 (374)
T 2aeu_A 90 LATILAL-KPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTA 168 (374)
T ss_dssp HHHHHHH-CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred HHHHHhC-CCCEEEEecCCCCccHHHHHHHHHcCcEEEEeCCHHHHHhcCCCccEEEEEccCCCCCCCCcccHHHHHHHH
Confidence 8888887 32 001 2577 777533332 467888899999
Q ss_pred hhcCCeEEEecccccccc-------c------eeeeec-c-----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHH
Q psy10669 148 DETDSIMFADMSHISGLI-------A------GVKGVT-K-----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAI 206 (337)
Q Consensus 148 ~~~ga~l~vD~AH~~Gli-------~------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaal 206 (337)
+++|+++++|++|..+.. . .++++. | .+|+++. ++.+.+.....+ ..+++++...+++
T Consensus 169 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~a~ 247 (374)
T 2aeu_A 169 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTK-FGLEAQPPLLAGI 247 (374)
T ss_dssp HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHT-TTCBCCHHHHHHH
T ss_pred HHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHHHHHHHHHhhcc-ccCCCCHHHHHHH
Confidence 999999999999987641 1 123333 2 3577654 566666543222 1235666677776
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHH----HHHHHh--------CCCEEecCCCCCeEEEEEecCCCcc---hH-HHHHH
Q psy10669 207 ATAMLQAQSDEFKSYQAQVKANASHL----SDEMIK--------RGYHVVTGGTDVHLILIDLRKNKLT---GS-KVELV 270 (337)
Q Consensus 207 a~a~~e~~~~~~~~y~~~v~~na~~l----~~~L~~--------~G~~v~~~~t~~h~v~V~~~~~~~~---~~-~~~~~ 270 (337)
..++..+ . .+..++..++.+.+ .+.|.+ .|+.+...++.....++++.. ..+ .. .+.+.
T Consensus 248 ~~al~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~l 322 (374)
T 2aeu_A 248 YRALKNF-N---LERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDD-TINIKKLIEIGFNL 322 (374)
T ss_dssp HHHHHHC-C---HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSH-HHHHHHHHHHHHHH
T ss_pred HHHHHHH-h---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccc-cccccchHHHHHHH
Confidence 6666554 2 23455666666666 455544 355554322222222322211 001 01 23356
Q ss_pred HhhcCceeccCc-------ccchhh
Q psy10669 271 LEEIAIACNKNT-------GISLAA 288 (337)
Q Consensus 271 L~~~gI~v~~~~-------girig~ 288 (337)
|++.||.+.+-. .+||+.
T Consensus 323 l~~~gV~v~~g~~~~~~~~~lRi~~ 347 (374)
T 2aeu_A 323 LKNYGIITITVAGMPGASKSLRIDL 347 (374)
T ss_dssp HHHHCEECSTTSSSCSSCCSEEEET
T ss_pred HHhCCEEEecCCCCCCCCCeEEEEc
Confidence 677899987632 578764
No 182
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=98.81 E-value=1.4e-07 Score=93.99 Aligned_cols=153 Identities=13% Similarity=0.050 Sum_probs=91.2
Q ss_pred ccEEEEcCccc--ccccCh---HHHHHHhhhcCCeEEEeccccccccc------------------------eeeeec-c
Q psy10669 124 FDFLSSGTTCY--SRCLDY---ARFRQICDETDSIMFADMSHISGLIA------------------------GVKGVT-K 173 (337)
Q Consensus 124 pklII~~~S~~--~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~------------------------g~~~T~-~ 173 (337)
||+|++..-.+ +...+. ++|.++|+++|+++++|++|..+..+ .+.+|. |
T Consensus 238 ~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK 317 (500)
T 3tcm_A 238 VRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSK 317 (500)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSS
T ss_pred ceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCc
Confidence 56666642222 344444 45556699999999999999865442 011232 2
Q ss_pred --------CCchhhh-----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHH----------HHhchhhHHHHHHHHHHHH
Q psy10669 174 --------TGEKILY-----DYEEKINNAVFPSLQGGPHNHAIGAIATAML----------QAQSDEFKSYQAQVKANAS 230 (337)
Q Consensus 174 --------~Gg~i~~-----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~----------e~~~~~~~~y~~~v~~na~ 230 (337)
++|+++. ++.+.+.... ....+++.+..++++.++. +.. .+.+++++++.++.+
T Consensus 318 ~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 394 (500)
T 3tcm_A 318 GYYGECGKRGGYFEITGFSAPVREQIYKIA--SVNLCSNITGQILASLVMNPPKASDESYASYK-AEKDGILASLARRAK 394 (500)
T ss_dssp TTTCCGGGCCEEEEEESCCTTHHHHHHHHH--HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cCCCCCccceEEEEEeCCCHHHHHHHHHHH--hcccCCCHHHHHHHHHHhcCccccchhHHHHH-HHHHHHHHHHHHHHH
Confidence 2355542 4655554332 1234667777777666653 121 345677889999999
Q ss_pred HHHHHHHhC-CCEEecCCCCCe-EEEEEecCC----------CcchH--HHHHHHhhcCceeccC
Q psy10669 231 HLSDEMIKR-GYHVVTGGTDVH-LILIDLRKN----------KLTGS--KVELVLEEIAIACNKN 281 (337)
Q Consensus 231 ~l~~~L~~~-G~~v~~~~t~~h-~v~V~~~~~----------~~~~~--~~~~~L~~~gI~v~~~ 281 (337)
+|.+.|.+. |+++.. .+.. .+++.+... +.... .+.+.|++.||.+.+-
T Consensus 395 ~l~~~L~~~~g~~~~~--~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 457 (500)
T 3tcm_A 395 ALEHAFNKLEGITCNE--AEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPG 457 (500)
T ss_dssp HHHHHHHTSTTEECCC--CCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEES
T ss_pred HHHHHHhcCCCcEEec--CCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeC
Confidence 999999986 888764 3333 334334321 11112 2457788889999864
No 183
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.81 E-value=7.2e-08 Score=92.74 Aligned_cols=157 Identities=16% Similarity=0.125 Sum_probs=92.2
Q ss_pred cEEEE-cCcc-cccccChHH---HHHHhhhcCCeEEEeccccccccc-------------------eeeeec-c----CC
Q psy10669 125 DFLSS-GTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA-------------------GVKGVT-K----TG 175 (337)
Q Consensus 125 klII~-~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-------------------g~~~T~-~----~G 175 (337)
+++++ .+.+ .+...+.++ |.++|+++|+++++|++|.....+ .+++|+ | .|
T Consensus 185 ~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 264 (409)
T 4eu1_A 185 VILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYG 264 (409)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGG
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCcc
Confidence 45553 3322 245566554 778899999999999998743321 123343 3 24
Q ss_pred ---chh---hh--h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 176 ---EKI---LY--D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 176 ---g~i---~~--~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
|++ .. + +.+.+.....+... +++....++.+.++.... ....++.++++.++.++|.+.|.+
T Consensus 265 ~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (409)
T 4eu1_A 265 HRCGALHISTASAEEAKRLVSQLALLIRPMYN-NPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA 343 (409)
T ss_dssp GCCEEEEEECSSHHHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHHHHhhhcC-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 663 43 3 44444433222222 344455555555554210 123567888999999999999999
Q ss_pred CC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhh
Q psy10669 239 RG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEI 290 (337)
Q Consensus 239 ~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~ 290 (337)
.| +++.. .+....++ + +++...+...|+++||.+.+ |.||+...
T Consensus 344 ~g~~~~~~~~~--~~~~~~~~-~---~~~~~~~~~ll~~~gv~v~p--~~Ri~~~~ 391 (409)
T 4eu1_A 344 CGSVHDWSHIE--RQVGMMAY-T---GLTREQVELLRSEYHIYMTL--NGRAAVSG 391 (409)
T ss_dssp TTCCSCCHHHH--HSCSSEEE-C---CCCHHHHHHHHHHHCEECCT--TCEEEGGG
T ss_pred cCCCCCcceec--CCceEEEE-e---CCCHHHHHHHHHcCCEEEcC--CCEEEEEe
Confidence 87 55543 22333332 1 23456677777788999998 67876543
No 184
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=98.81 E-value=3.3e-07 Score=91.32 Aligned_cols=153 Identities=13% Similarity=0.050 Sum_probs=92.3
Q ss_pred ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccce-------------------------eeeec-
Q psy10669 124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIAG-------------------------VKGVT- 172 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g-------------------------~~~T~- 172 (337)
+|+|++. +++ .+...+ +++|.++|+++|+++++|++|.-+...+ +.+|.
T Consensus 236 ~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~S 315 (498)
T 3ihj_A 236 PKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTS 315 (498)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESS
T ss_pred CeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccc
Confidence 5777764 322 134444 4557788999999999999998654420 11222
Q ss_pred c--------CCchhh---h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHH----------HHhchhhHHHHHHHHHHH
Q psy10669 173 K--------TGEKIL---Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAML----------QAQSDEFKSYQAQVKANA 229 (337)
Q Consensus 173 ~--------~Gg~i~---~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~----------e~~~~~~~~y~~~v~~na 229 (337)
| ++|+++ . ++.+.+..... ...+++.+..++++.++. +.. .+.++.++++.++.
T Consensus 316 K~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~-~~~~~~~~~l~~~~ 392 (498)
T 3ihj_A 316 KGYMGECGYRGGYMEVINLHPEIKGQLVKLLS--VRLCPPVSGQAAMDIVVNPPVAGEESFEQFS-REKESVLGNLAKKA 392 (498)
T ss_dssp SSTTCCSSSCCEEEEEESCCHHHHHHHHHHHH--HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH-HHHHHHHHHHHHHH
T ss_pred cccccCcccceEEEEEecCCHHHHHHHHHHHh--ccCCCCHHHHHHHHHHhcCCccCcccHHHHH-HHHHHHHHHHHHHH
Confidence 2 346665 2 46665554322 233456666666655542 111 23456678899999
Q ss_pred HHHHHHHHhC-CCEEecCCCCCe-EEEEEecC----------CCcchHH--HHHHHhhcCceeccC
Q psy10669 230 SHLSDEMIKR-GYHVVTGGTDVH-LILIDLRK----------NKLTGSK--VELVLEEIAIACNKN 281 (337)
Q Consensus 230 ~~l~~~L~~~-G~~v~~~~t~~h-~v~V~~~~----------~~~~~~~--~~~~L~~~gI~v~~~ 281 (337)
+++.+.|.+. |+++.. .+.. .+++++.. .+++..+ +.+.|++.||.+.+-
T Consensus 393 ~~l~~~L~~~~g~~~~~--p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG 456 (498)
T 3ihj_A 393 KLTEDLFNQVPGIHCNP--LQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPG 456 (498)
T ss_dssp HHHHHHHHTSTTEECCC--CCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEG
T ss_pred HHHHHHHhcCCCcEecC--CCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeC
Confidence 9999999985 888764 3333 33444532 2444444 467788889998763
No 185
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=98.80 E-value=2.2e-07 Score=92.45 Aligned_cols=171 Identities=12% Similarity=0.059 Sum_probs=106.1
Q ss_pred chHHHHHHHHHHHHHhhcCCCC-CCCcceeecCCC-chhHHHHHHhhC----------------Cc--------------
Q psy10669 72 QFIDEIEIVAQQRSLKAFNLDP-EQWGCNVQPYSG-SPANFAVCEKAL----------------PT-------------- 119 (337)
Q Consensus 72 ~~~~~lE~~~~~~~a~lfg~~~-~~~~~~v~~~Sg-t~AN~~v~~aLl----------------~~-------------- 119 (337)
....++|..+++.++++||.+. + .++.+++| |.||+.++.++. +.
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~---~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~ 204 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKD---GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKK 204 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSS---CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCC---CCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHH
Confidence 4456889888889999999872 1 35666555 889877666652 21
Q ss_pred ----------------------------c--cc-------cccEEEEcCc--ccccccChHHHHHHhhhcCCeEEEeccc
Q psy10669 120 ----------------------------N--NA-------RFDFLSSGTT--CYSRCLDYARFRQICDETDSIMFADMSH 160 (337)
Q Consensus 120 ----------------------------~--~a-------~pklII~~~S--~~~~~~d~~~l~eia~~~ga~l~vD~AH 160 (337)
+ +. +|++|+++.. .++...|+++|.++|+++|++++||+||
T Consensus 205 ~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~ 284 (504)
T 2okj_A 205 AGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAW 284 (504)
T ss_dssp HHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred HHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhh
Confidence 0 00 2567777632 3567889999999999999999999999
Q ss_pred cccccc---------e------eeeeccC-------Cchhhh---hHHHHHhhccCCCCCCCCc----------------
Q psy10669 161 ISGLIA---------G------VKGVTKT-------GEKILY---DYEEKINNAVFPSLQGGPH---------------- 199 (337)
Q Consensus 161 ~~Gli~---------g------~~~T~~~-------Gg~i~~---~l~~~i~~~~~p~~~g~~~---------------- 199 (337)
+.|.+. | +++++|| .|+++. ++.+......-|++.++..
T Consensus 285 ~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (504)
T 2okj_A 285 GGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCG 364 (504)
T ss_dssp GGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSS
T ss_pred hhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCC
Confidence 887753 1 2233232 244433 2433222121222211100
Q ss_pred -HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec
Q psy10669 200 -NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT 245 (337)
Q Consensus 200 -~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~ 245 (337)
.....++..++..+....++++.++..+++++|.+.|.+ .|++++.
T Consensus 365 rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 412 (504)
T 2okj_A 365 RHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF 412 (504)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESS
T ss_pred CCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 000112222233333356788899999999999999998 5999885
No 186
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.80 E-value=3.6e-07 Score=89.22 Aligned_cols=153 Identities=11% Similarity=0.041 Sum_probs=89.1
Q ss_pred ccEEEEcCc--ccccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c---CC----ch
Q psy10669 124 FDFLSSGTT--CYSRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K---TG----EK 177 (337)
Q Consensus 124 pklII~~~S--~~~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~---~G----g~ 177 (337)
+++||+.+. +-+...+ +++|+++|+++|++||+|++|. .|-.+ ++ ..|. | .| |+
T Consensus 216 ~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~ 295 (452)
T 3n5m_A 216 IAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYLPLSA 295 (452)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCCEE
T ss_pred EEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCcceEE
Confidence 356777643 2234444 7889999999999999999997 43332 11 1121 2 13 44
Q ss_pred hhh--hHHHHHhh-----ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CC---EEec
Q psy10669 178 ILY--DYEEKINN-----AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GY---HVVT 245 (337)
Q Consensus 178 i~~--~l~~~i~~-----~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~---~v~~ 245 (337)
++. ++.+.+.. ..+-+.+.+.++...++..+++..+.+ +++.+++.++.+++++.|.+. ++ ..+.
T Consensus 296 ~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (452)
T 3n5m_A 296 TAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN---ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIR 372 (452)
T ss_dssp EEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred EEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 443 56665532 111122334566666666666665532 467888899999999988763 32 2222
Q ss_pred CCCCCeEEEEEecCCCc--------chHHHHHHHhhcCceeccC
Q psy10669 246 GGTDVHLILIDLRKNKL--------TGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 246 ~~t~~h~v~V~~~~~~~--------~~~~~~~~L~~~gI~v~~~ 281 (337)
....++.+++..... ...++.+.|.+.||.+.+.
T Consensus 373 --~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 414 (452)
T 3n5m_A 373 --GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRN 414 (452)
T ss_dssp --ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEEC
T ss_pred --EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeec
Confidence 233355566532110 1245667777789998764
No 187
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.80 E-value=4.5e-08 Score=95.36 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=85.0
Q ss_pred ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669 32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111 (337)
Q Consensus 32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~ 111 (337)
.-.+..|..|+.|.+.++... +.+. ..|+..+|+ ++....++| +++++++|.++ .+.++||+.||..
T Consensus 22 ~~pi~~~~~~~~~~~~~~~~~-~~~~-~~~~~y~~~--~~~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~ 88 (421)
T 2ctz_A 22 QVPIYPTTSYVFKSPEHAANL-FALK-EFGNIYSRI--MNPTVDVLE----KRLAALEGGKA-----ALATASGHAAQFL 88 (421)
T ss_dssp SCCBCCCSCBCCSCHHHHHHH-HTTT-TGGGSCBTT--BCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred cCCeeccceeeeCCHHHHHHh-hccc-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHH
Confidence 456788999998777665532 2222 123333333 234445565 58899999874 5889999999988
Q ss_pred HHHhhCCc------------------------------cc-c-------------cccEEEEcCcc--cccccChHHHHH
Q psy10669 112 VCEKALPT------------------------------NN-A-------------RFDFLSSGTTC--YSRCLDYARFRQ 145 (337)
Q Consensus 112 v~~aLl~~------------------------------~~-a-------------~pklII~~~S~--~~~~~d~~~l~e 145 (337)
++.+++++ .. . ++++|++..-. .+...|+++|.+
T Consensus 89 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~ 168 (421)
T 2ctz_A 89 ALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQ 168 (421)
T ss_dssp HHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHH
Confidence 88888654 11 0 15777776333 368889999999
Q ss_pred HhhhcCCeEEEeccc-ccccc
Q psy10669 146 ICDETDSIMFADMSH-ISGLI 165 (337)
Q Consensus 146 ia~~~ga~l~vD~AH-~~Gli 165 (337)
+|+++|+++++|++| ..|..
T Consensus 169 ~a~~~g~~livD~~~~~~g~~ 189 (421)
T 2ctz_A 169 AAREKGVALIVDNTFGMGGYL 189 (421)
T ss_dssp HHHHHTCEEEEECGGGGGGTS
T ss_pred HHHHcCCEEEEECCccccccc
Confidence 999999999999999 88863
No 188
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=98.79 E-value=3.8e-08 Score=95.49 Aligned_cols=217 Identities=13% Similarity=0.049 Sum_probs=128.7
Q ss_pred eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669 33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112 (337)
Q Consensus 33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v 112 (337)
-.+..|..|..+.+.+... ..| +|+ ++...+++| +++++++|.+. ++.++||+.|+..+
T Consensus 40 ~pi~~stt~~~~~~~~~~~----~~y------~r~--~~p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~ 98 (403)
T 3cog_A 40 PPISLSTTFKQGAPGQHSG----FEY------SRS--GNPTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTI 98 (403)
T ss_dssp CCBCCCSCBCCC--------------------------CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred CCeeccceeecCCccccCC----Ccc------cCC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 3455666677666544321 111 121 334455666 58889999874 69999999998888
Q ss_pred HHhhCCc--------------------------------------cc--c---cccEEEEc-Ccc-cccccChHHHHHHh
Q psy10669 113 CEKALPT--------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQIC 147 (337)
Q Consensus 113 ~~aLl~~--------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia 147 (337)
+. ++++ .+ + ++++|++. .++ .+...|+++|.++|
T Consensus 99 ~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la 177 (403)
T 3cog_A 99 TH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIV 177 (403)
T ss_dssp HT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred HH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHH
Confidence 88 7654 00 0 25777765 333 35888999999999
Q ss_pred hhcC-CeEEEeccccccccc--------eeeee-cc-----C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHH
Q psy10669 148 DETD-SIMFADMSHISGLIA--------GVKGV-TK-----T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAI 206 (337)
Q Consensus 148 ~~~g-a~l~vD~AH~~Gli~--------g~~~T-~~-----~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaal 206 (337)
+++| +++++|++|..+... .++.+ +| . +|+++. ++.+.+.....+. .+++++...++.
T Consensus 178 ~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~-g~~~~~~~~~~~ 256 (403)
T 3cog_A 178 HKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSL-GAVPSPIDCYLC 256 (403)
T ss_dssp TSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHH-CCCCCHHHHHHH
T ss_pred HHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhc-CCCCCHHHHHHH
Confidence 9999 999999999988643 12333 23 1 366654 4666665443221 223444433333
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---------------CCEEecC--CCCCeEEEEEecCCCcchHHHHH
Q psy10669 207 ATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---------------GYHVVTG--GTDVHLILIDLRKNKLTGSKVEL 269 (337)
Q Consensus 207 a~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---------------G~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~ 269 (337)
..++. ..+.+.++..+|++.+++.|.+. |+++... .....++.+.+.. ....+.+
T Consensus 257 ~~~l~-----~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~---~~~~~~~ 328 (403)
T 3cog_A 257 NRGLK-----TLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG---TLQHAEI 328 (403)
T ss_dssp HHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS---CHHHHHH
T ss_pred Hhhhh-----HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC---CHHHHHH
Confidence 33332 23566788888999999988775 2222220 0125567776643 2356778
Q ss_pred HHhhcCceecc
Q psy10669 270 VLEEIAIACNK 280 (337)
Q Consensus 270 ~L~~~gI~v~~ 280 (337)
.|++.||.+..
T Consensus 329 ~l~~~~i~~~~ 339 (403)
T 3cog_A 329 FLKNLKLFTLA 339 (403)
T ss_dssp HHHHCSSSEEC
T ss_pred HHHhCCcceEc
Confidence 88888887653
No 189
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=98.77 E-value=9.2e-08 Score=93.30 Aligned_cols=190 Identities=14% Similarity=0.133 Sum_probs=113.5
Q ss_pred eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669 34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC 113 (337)
Q Consensus 34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~ 113 (337)
....|-.|..+...++.. .+.++. .++.-.|+ ++...+++| +++++++|.+. .+.+.||+.|+..++
T Consensus 47 pi~~s~t~~~~~~~~~~~-~~~~~~-~~~~y~r~--~~p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al 113 (414)
T 3ndn_A 47 AMYLTSGYVYGSAAVAEK-SFAGEL-DHYVYSRY--GNPTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSL 113 (414)
T ss_dssp CBCCCSBBCCSSHHHHHH-HHTTSS-CCCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred CcccCCceecCChHHHHH-HHhCCc-CCcCcCCC--CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHH
Confidence 456666666554433332 222221 12222232 345556776 57889999864 588889999998888
Q ss_pred HhhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhh
Q psy10669 114 EKALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICD 148 (337)
Q Consensus 114 ~aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~ 148 (337)
.+++++ +.+ ++++|++. .++ .+...|+++|.++|+
T Consensus 114 ~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~ 193 (414)
T 3ndn_A 114 GALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAH 193 (414)
T ss_dssp HTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred HHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHH
Confidence 998765 101 26888775 322 357889999999999
Q ss_pred hcCCeEEEeccccccccc-----e---eeeec-c--------CCchhhh--hH-HHHHhhccCCCCCCCCcHHHHHHHHH
Q psy10669 149 ETDSIMFADMSHISGLIA-----G---VKGVT-K--------TGEKILY--DY-EEKINNAVFPSLQGGPHNHAIGAIAT 208 (337)
Q Consensus 149 ~~ga~l~vD~AH~~Gli~-----g---~~~T~-~--------~Gg~i~~--~l-~~~i~~~~~p~~~g~~~~~~iaala~ 208 (337)
++|++|++|++|..|... | ++.+. | .||+++. +. .+.+.... .. .|+...+..++++
T Consensus 194 ~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~-~~-~g~~~~~~~a~~~- 270 (414)
T 3ndn_A 194 AAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM-RH-TGPAMSAFNAWVL- 270 (414)
T ss_dssp HTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHH-HH-HCCCCCHHHHHHH-
T ss_pred HcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHH-HH-cCCCCCHHHHHHH-
Confidence 999999999999987643 1 23322 2 1466654 22 22333211 11 1222223223222
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE
Q psy10669 209 AMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH 242 (337)
Q Consensus 209 a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~ 242 (337)
+..+ .....+.++..+|++++++.|.+. ++.
T Consensus 271 -~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 302 (414)
T 3ndn_A 271 -LKGL--ETLAIRVQHSNASAQRIAEFLNGHPSVR 302 (414)
T ss_dssp -HHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred -HHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCEe
Confidence 2222 245677888999999999999874 443
No 190
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.77 E-value=6.1e-07 Score=86.89 Aligned_cols=155 Identities=8% Similarity=-0.038 Sum_probs=96.3
Q ss_pred ccEEEEcCc--c-cccccChH---HHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC----C--
Q psy10669 124 FDFLSSGTT--C-YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT----G-- 175 (337)
Q Consensus 124 pklII~~~S--~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~----G-- 175 (337)
+++|++.++ + .+...+.+ +|.++|+++|+++++|++|.-.... .+.+|..| |
T Consensus 191 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlR 270 (425)
T 2r2n_A 191 PKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLR 270 (425)
T ss_dssp CSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTC
T ss_pred ceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccc
Confidence 678876432 2 24666666 6778899999999999999732221 12233322 3
Q ss_pred -chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhc----hhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC
Q psy10669 176 -EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQS----DEFKSYQAQVKANASHLSDEMIKR--GYHVVTG 246 (337)
Q Consensus 176 -g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~----~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~ 246 (337)
|+++. ++.+.+...... ...+++.+..+++..++..+.. ...++.++++.++.++|.+.|.+. |+..+..
T Consensus 271 iG~~~~~~~l~~~l~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 349 (425)
T 2r2n_A 271 IGFLTGPKPLIERVILHIQV-STLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHV 349 (425)
T ss_dssp CEEEEEEHHHHHHHHHHHHT-TTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECC
T ss_pred eEEEecCHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeC
Confidence 66654 566655543222 2235666777777776665321 223456677788888899999874 7742222
Q ss_pred CCCCeEEEEEecCCCcchHH-HHHHHhhcCceecc
Q psy10669 247 GTDVHLILIDLRKNKLTGSK-VELVLEEIAIACNK 280 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~~~~~-~~~~L~~~gI~v~~ 280 (337)
...+..+++++.... +..+ +.+.|.+.||.+.+
T Consensus 350 p~~g~~~~~~~~~~~-~~~~~~~~~l~~~gv~v~p 383 (425)
T 2r2n_A 350 PAAGMFLWIKVKGIN-DVKELIEEKAVKMGVLMLP 383 (425)
T ss_dssp CSBSSEEEEEETTCS-CCHHHHHTHHHHTTEECEE
T ss_pred CCceEEEEEEeCCCC-CHHHHHHHHHHHCCcEEec
Confidence 345567788886533 4444 57788888999875
No 191
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.76 E-value=1.2e-07 Score=91.08 Aligned_cols=161 Identities=11% Similarity=0.035 Sum_probs=96.1
Q ss_pred cc-EEEEc-C-cc-cccccChHHHHHHhh---------hcCCeEEEeccccc---------cccc-----------eeee
Q psy10669 124 FD-FLSSG-T-TC-YSRCLDYARFRQICD---------ETDSIMFADMSHIS---------GLIA-----------GVKG 170 (337)
Q Consensus 124 pk-lII~~-~-S~-~~~~~d~~~l~eia~---------~~ga~l~vD~AH~~---------Gli~-----------g~~~ 170 (337)
++ +|++. + .+ .+...|.+++.+|++ ++|++|++|++|.- .+.. .+++
T Consensus 178 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (413)
T 3t18_A 178 DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAF 257 (413)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEE
Confidence 45 56654 3 22 367888887775554 89999999999731 1111 0122
Q ss_pred ec-c----CC---chhhh-----hHHHHHhhccCC---CCCCCCcHHHHHHHHHHHHHH----hchhhHHHHHHHHHHHH
Q psy10669 171 VT-K----TG---EKILY-----DYEEKINNAVFP---SLQGGPHNHAIGAIATAMLQA----QSDEFKSYQAQVKANAS 230 (337)
Q Consensus 171 T~-~----~G---g~i~~-----~l~~~i~~~~~p---~~~g~~~~~~iaala~a~~e~----~~~~~~~y~~~v~~na~ 230 (337)
|. | .| |+++. ++.+.+...... +..++++....+++..++... .....++.++++.++.+
T Consensus 258 S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 337 (413)
T 3t18_A 258 SMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRAD 337 (413)
T ss_dssp EHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 32 2 23 55542 455544432100 112345566666655554332 01233466788899999
Q ss_pred HHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 231 HLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 231 ~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
++.+.|.+.|+++... ..+-.+++++ .+..++.+.|.+.||.+.+.. .+||+..
T Consensus 338 ~l~~~l~~~g~~~~~~-~~~~~~~~~~----~~~~~~~~~l~~~gv~v~~g~~~iRis~~ 392 (413)
T 3t18_A 338 VFVTAAKENKLTMIPY-FGGFFTFIPT----DKAFDIVKDLEKENIFTIPSAKGIRVAIC 392 (413)
T ss_dssp HHHHHHHHTTCCCBCC-CSSSCEEEEC----SCHHHHHHHHHHTTEECEECSSEEEECTT
T ss_pred HHHHHHHHcCCCccCC-CceEEEEeCC----CCHHHHHHHHHhCCEEEecCCCceEEEEe
Confidence 9999999999988752 2233445554 256778888988999998754 7898754
No 192
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.23 E-value=9.2e-10 Score=105.48 Aligned_cols=235 Identities=12% Similarity=0.090 Sum_probs=139.7
Q ss_pred cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-
Q psy10669 31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG- 105 (337)
Q Consensus 31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg- 105 (337)
..|.|...++- .+|.+.+++...+.+. ..+++ .+ ..+++....+.+.+.+| .+. .+|.+++|
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~-----~~---~~~l~~~la~~l~~~~g~~~~~----~~v~~~~g~ 98 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYT-----YA---SDELLQAVLDWEKSEHQYSFDK----EDIVFVEGV 98 (392)
Confidence 44566555542 2788999887654321 11121 11 33454333344555556 333 24677666
Q ss_pred chhHHHHHHhhCCc------------------------------c-------c-----------ccccEEEEcCccc--c
Q psy10669 106 SPANFAVCEKALPT------------------------------N-------N-----------ARFDFLSSGTTCY--S 135 (337)
Q Consensus 106 t~AN~~v~~aLl~~------------------------------~-------~-----------a~pklII~~~S~~--~ 135 (337)
++|+..++.+++++ . . .++++|++..-.+ +
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 178 (392)
T 3b1d_A 99 VPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGG 178 (392)
Confidence 67888888887543 0 0 0156666642222 3
Q ss_pred ccc---ChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c-------CCchhhh---hHH
Q psy10669 136 RCL---DYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K-------TGEKILY---DYE 183 (337)
Q Consensus 136 ~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~-------~Gg~i~~---~l~ 183 (337)
... ++++|.++|+++|+++++|++|......+ +.+|. | +.|+++. ++.
T Consensus 179 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 258 (392)
T 3b1d_A 179 RVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLC 258 (392)
Confidence 333 47788899999999999999998644321 11222 2 1255554 266
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCC
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNK 261 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~ 261 (337)
+.+.....+..++++++...++...++.+. ....++.++++.++.+.|.+.|.+. |+++..+ ..+..+++++...+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~i~~~~~~ 336 (392)
T 3b1d_A 259 AQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKP-QGTYLIWLDFSDYG 336 (392)
Confidence 666655444434456666666666666542 2345677888889999999998873 7877642 23344457776544
Q ss_pred cchHHHHHHHh-hcCceecc
Q psy10669 262 LTGSKVELVLE-EIAIACNK 280 (337)
Q Consensus 262 ~~~~~~~~~L~-~~gI~v~~ 280 (337)
.+..++.+.|. +.||.+.+
T Consensus 337 ~~~~~l~~~l~~~~gi~v~~ 356 (392)
T 3b1d_A 337 LTDDALFTLLHDQAKVILNR 356 (392)
Confidence 45667777774 78999876
No 193
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.75 E-value=3.6e-07 Score=88.45 Aligned_cols=152 Identities=11% Similarity=0.035 Sum_probs=93.4
Q ss_pred ccEEEEcCccc---ccccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCch
Q psy10669 124 FDFLSSGTTCY---SRCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEK 177 (337)
Q Consensus 124 pklII~~~S~~---~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~ 177 (337)
+++||+.+ ++ +...+ +++|+++ +++|++|++|++|+ |+.. + +.+..| ..|+
T Consensus 200 ~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~ 276 (424)
T 2e7u_A 200 IAAIIFEP-VVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFRLAFGGATELLGLKPDLVTLGKILGGGLPAAA 276 (424)
T ss_dssp EEEEEECS-SBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEEEECGGGGTTSSCEE
T ss_pred EEEEEEeC-CCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccccchhHHHHHhCCCcchhhhhhhhhCCcceEE
Confidence 35777764 43 34556 8889999 99999999999998 6521 1 111122 2344
Q ss_pred hhh--hHHHHHhhcc--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEE-ecCCC
Q psy10669 178 ILY--DYEEKINNAV--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHV-VTGGT 248 (337)
Q Consensus 178 i~~--~l~~~i~~~~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v-~~~~t 248 (337)
++. ++.+.+.+.. +-+..-+.++...++..+++..+.+ .+++.+++.++.++|.+.|.+. |+.. +. .
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~ 352 (424)
T 2e7u_A 277 YAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVN--R 352 (424)
T ss_dssp EEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE--E
T ss_pred EEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEE--e
Confidence 443 4555554311 1111224566666666666766532 3568889999999999999873 6531 22 2
Q ss_pred CCeEEEEEecCCC------------cchHHHHHHHhhcCceeccCc
Q psy10669 249 DVHLILIDLRKNK------------LTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 249 ~~h~v~V~~~~~~------------~~~~~~~~~L~~~gI~v~~~~ 282 (337)
...++++++.... ....++.+.|.+.||.+.+..
T Consensus 353 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 398 (424)
T 2e7u_A 353 VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN 398 (424)
T ss_dssp ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS
T ss_pred eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccC
Confidence 3447788886421 124566777777899998643
No 194
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=98.74 E-value=4.1e-07 Score=86.97 Aligned_cols=160 Identities=13% Similarity=0.109 Sum_probs=88.1
Q ss_pred ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc-------------------eeeeec-c----C
Q psy10669 124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA-------------------GVKGVT-K----T 174 (337)
Q Consensus 124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-------------------g~~~T~-~----~ 174 (337)
+++|++..-++ ++..+ +++|.++|+++|+++++|++|.....+ .+++|. | .
T Consensus 176 ~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 255 (401)
T 7aat_A 176 SIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLY 255 (401)
T ss_dssp CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCG
T ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccc
Confidence 46666653333 34455 556668899999999999998643321 122333 2 1
Q ss_pred C---chhhh-----h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHH--H---hchhhHHHHHHHHHHHHHHHHHHH
Q psy10669 175 G---EKILY-----D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQ--A---QSDEFKSYQAQVKANASHLSDEMI 237 (337)
Q Consensus 175 G---g~i~~-----~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e--~---~~~~~~~y~~~v~~na~~l~~~L~ 237 (337)
| |+++. + +.+.+.....+... ++.....+..+.++.. + .....++.++++.++.++|.+.|.
T Consensus 256 G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 334 (401)
T 7aat_A 256 GERAGAFTVICRDAEEAKRVESQLKILIRPMYS-NPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK 334 (401)
T ss_dssp GGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEEEeCCHHHHHHHHHHHHHHHHhccC-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 54321 2 33333332222222 2333322222222211 0 012346678888999999999999
Q ss_pred hCC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhHh
Q psy10669 238 KRG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQA 292 (337)
Q Consensus 238 ~~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~t 292 (337)
+.| +++... ..+...+++ ++...+...|+++||.+.+ ++||+....|
T Consensus 335 ~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~--~~Ris~~~~~ 385 (401)
T 7aat_A 335 KEGSSHNWQHITD-QIGMFCFTG-----LKPEQVERLTKEFSIYMTK--DGRISVAGVA 385 (401)
T ss_dssp HTTCCSCCHHHHH-CCSSEEECC-----CCHHHHHHHHHHHCEECCT--TCEEEGGGCC
T ss_pred hcCCCCCCceecC-CcceEEecC-----CCHHHHHHHHHhCCEeccC--CCeEEeccCC
Confidence 876 444331 112233332 3467777777889999986 7898765433
No 195
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=98.73 E-value=6e-07 Score=88.88 Aligned_cols=159 Identities=13% Similarity=0.080 Sum_probs=94.9
Q ss_pred cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC-----ch
Q psy10669 125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG-----EK 177 (337)
Q Consensus 125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G-----g~ 177 (337)
++||+. .++++. .+ +++|+++|+++|++||+|++|+ .|-.+ ++ ..|. | .| |+
T Consensus 225 aavi~e-pv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~ 303 (472)
T 3hmu_A 225 AAFIAE-PVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGG 303 (472)
T ss_dssp EEEEEC-SSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEE
T ss_pred EEEEEc-CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceEE
Confidence 567775 465543 33 6789999999999999999997 44333 11 1122 2 12 23
Q ss_pred hhh--hHHHHHhhc-cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHHHhC----CCEEecCCCC
Q psy10669 178 ILY--DYEEKINNA-VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK-ANASHLSDEMIKR----GYHVVTGGTD 249 (337)
Q Consensus 178 i~~--~l~~~i~~~-~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~-~na~~l~~~L~~~----G~~v~~~~t~ 249 (337)
+++ ++.+.++.. ..-+.+-+.++...++..+++..+.+ +++.+++. ++.++|++.|++. ++..+. ..
T Consensus 304 v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr--~~ 378 (472)
T 3hmu_A 304 SIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALTDHPLVGEAK--IV 378 (472)
T ss_dssp EEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEE--EE
T ss_pred EEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE--ec
Confidence 333 576666422 11122334566676666666665532 36788888 9999999999763 122222 23
Q ss_pred CeEEEEEecCCCc-----------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 250 VHLILIDLRKNKL-----------TGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 250 ~h~v~V~~~~~~~-----------~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
..++.+.+..... ....+.+.|.+.||.+.+.. -|||..+
T Consensus 379 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~ 430 (472)
T 3hmu_A 379 GMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVGDRMIISPP 430 (472)
T ss_dssp TTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEETTEEEECCC
T ss_pred CceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecCCEEEEECC
Confidence 3466676653210 14566777777899987643 5777543
No 196
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=98.72 E-value=3.4e-07 Score=89.28 Aligned_cols=162 Identities=13% Similarity=0.065 Sum_probs=98.9
Q ss_pred cEEEEcCcc--cccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc-----hh
Q psy10669 125 DFLSSGTTC--YSRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE-----KI 178 (337)
Q Consensus 125 klII~~~S~--~~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg-----~i 178 (337)
++|++.+.. .+...| +++|+++|+++|++|++|++|+ .|..+ + +.+..| .|| ++
T Consensus 221 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~ 300 (449)
T 3a8u_X 221 AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAV 300 (449)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEE
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEE
Confidence 577776532 245667 8999999999999999999994 66432 1 111112 122 22
Q ss_pred hh--hHHHHHhhcc--------CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEec-C
Q psy10669 179 LY--DYEEKINNAV--------FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVT-G 246 (337)
Q Consensus 179 ~~--~l~~~i~~~~--------~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~-~ 246 (337)
+. ++.+.+.... .-+..-+.++...++...++..+.+ .++.+++.++.+++.+.|.+.+ +.++. .
T Consensus 301 ~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 377 (449)
T 3a8u_X 301 IASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFEKALHGIKGAKNVIDI 377 (449)
T ss_dssp EEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEE
T ss_pred EECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 32 5666665431 1111224566777777777766542 2578889999999999998743 33221 0
Q ss_pred CCCCeEEEEEecCCC--c--chHHHHHHHhhcCceeccC-cccchhhh
Q psy10669 247 GTDVHLILIDLRKNK--L--TGSKVELVLEEIAIACNKN-TGISLAAE 289 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~--~--~~~~~~~~L~~~gI~v~~~-~girig~~ 289 (337)
.....++++++.... . +..++.+.|.+.||.+.+. ..|||+.+
T Consensus 378 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRis~~ 425 (449)
T 3a8u_X 378 RNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGGDTLQFGPT 425 (449)
T ss_dssp EEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEETTEEEECCC
T ss_pred eeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCCCEEEEECC
Confidence 124567788886432 1 1235677777779998763 25777643
No 197
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.71 E-value=1.6e-06 Score=83.84 Aligned_cols=151 Identities=17% Similarity=0.163 Sum_probs=89.5
Q ss_pred cEEEEcCcccc-ccc---C----hHHHHHHhhhcCCeEEEecccc-ccccc---------ee---eeec-c---CC----
Q psy10669 125 DFLSSGTTCYS-RCL---D----YARFRQICDETDSIMFADMSHI-SGLIA---------GV---KGVT-K---TG---- 175 (337)
Q Consensus 125 klII~~~S~~~-~~~---d----~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g~---~~T~-~---~G---- 175 (337)
++|++.+ +++ ..+ + +++|+++|+++|++|++|++|. .|-.+ ++ ..|. | .|
T Consensus 192 ~~vi~~p-~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~ 270 (430)
T 3i4j_A 192 AAFMAEP-VVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPL 270 (430)
T ss_dssp EEEEECS-SCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCC
T ss_pred EEEEEcC-cccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCcccc
Confidence 5677764 445 322 2 6789999999999999999997 33221 10 1121 2 13
Q ss_pred chhhh--hHHHHHhhc---cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEec
Q psy10669 176 EKILY--DYEEKINNA---VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVT 245 (337)
Q Consensus 176 g~i~~--~l~~~i~~~---~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~ 245 (337)
|+++. ++.+.+.+. ..-+...+.++...++..+++..+.+ +++.+++.++.+++++.|.+. ++..+.
T Consensus 271 G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 347 (430)
T 3i4j_A 271 AGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER---EDLTGAAKERGAQLLAGLQALQARFPQMMQVR 347 (430)
T ss_dssp EEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 45554 577766653 11122234566677776666766532 467888888888888888763 344333
Q ss_pred CCCCCeEEEEEecCCC--------cchHHHHHHHhhcCceeccC
Q psy10669 246 GGTDVHLILIDLRKNK--------LTGSKVELVLEEIAIACNKN 281 (337)
Q Consensus 246 ~~t~~h~v~V~~~~~~--------~~~~~~~~~L~~~gI~v~~~ 281 (337)
....++.+.+.+.. ....++.+.|.+.||.+.+.
T Consensus 348 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 389 (430)
T 3i4j_A 348 --GTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPG 389 (430)
T ss_dssp --EETTEEEEEEC------------CHHHHHHHHHHTTEECC--
T ss_pred --EEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEec
Confidence 23446667664211 12356777787889999864
No 198
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.71 E-value=1.6e-06 Score=84.09 Aligned_cols=155 Identities=12% Similarity=0.099 Sum_probs=91.1
Q ss_pred ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccccc---------ee---eeec-c------CCch
Q psy10669 124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGLIA---------GV---KGVT-K------TGEK 177 (337)
Q Consensus 124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~---~~T~-~------~Gg~ 177 (337)
+++||+.+ +++ ...+ +++|+++|+++|++|++|++|. |+.. ++ ..|. | ..|+
T Consensus 201 ~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~ 278 (429)
T 3k28_A 201 IACVIVEP-VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GFRVAYNCGQGYYGVTPDLTCLGKVIGGGLPVGA 278 (429)
T ss_dssp EEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEEEECGGGGTTSCCEE
T ss_pred EEEEEEcC-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCcchHHHHhCCCCceehhhhhhcCCCCeEE
Confidence 35777764 443 3444 7889999999999999999995 4311 10 1121 2 1234
Q ss_pred hhh--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CC-EEecCCC
Q psy10669 178 ILY--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GY-HVVTGGT 248 (337)
Q Consensus 178 i~~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~-~v~~~~t 248 (337)
+++ ++.+.+.+. .+.+...+.++...++..+++..+ + ++..+++.++.++|.+.|.+. ++ ..+. .
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~ 352 (429)
T 3k28_A 279 YGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQL-T---PESYVEFERKAEMLEAGLRKAAEKHGIPHHIN--R 352 (429)
T ss_dssp EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTC-C---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE--E
T ss_pred EEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEE--e
Confidence 333 455544431 122223355666666666666544 2 578889999999999988873 22 1111 2
Q ss_pred CCeEEEEEecCCCc------------chHHHHHHHhhcCceeccCc--ccch
Q psy10669 249 DVHLILIDLRKNKL------------TGSKVELVLEEIAIACNKNT--GISL 286 (337)
Q Consensus 249 ~~h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~~~--giri 286 (337)
...++.+.+..... ...++.+.|.+.||.+.+.. .+|+
T Consensus 353 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~ 404 (429)
T 3k28_A 353 AGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFL 404 (429)
T ss_dssp ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCC
T ss_pred eccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCCCCCEEE
Confidence 33355565533211 13566677777899998743 5666
No 199
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.71 E-value=1.5e-06 Score=84.96 Aligned_cols=160 Identities=18% Similarity=0.139 Sum_probs=94.0
Q ss_pred cEEEEcCccc-ccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CCch----
Q psy10669 125 DFLSSGTTCY-SRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TGEK---- 177 (337)
Q Consensus 125 klII~~~S~~-~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~Gg~---- 177 (337)
++||+.+ ++ ++. .+ +++|+++|+++|++||+|++|+ .|-.+ ++ ..|. | .||+
T Consensus 212 a~vi~ep-~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig 290 (448)
T 3dod_A 212 AALSIES-MVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIA 290 (448)
T ss_dssp EEEEEES-SEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCE
T ss_pred EEEEEeC-cccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceE
Confidence 5677764 44 333 23 7889999999999999999997 43222 11 1121 2 1343
Q ss_pred -hhh--hHHHHHhhc------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec-C
Q psy10669 178 -ILY--DYEEKINNA------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT-G 246 (337)
Q Consensus 178 -i~~--~l~~~i~~~------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~-~ 246 (337)
++. ++.+.+... ...+...+.++...++..+++..+.+ +++.+++.++.+++++.|.+ .++..+. .
T Consensus 291 ~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 367 (448)
T 3dod_A 291 VTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES---ENIVEQVAEKSKKLHFLLQDLHALPHVGDI 367 (448)
T ss_dssp EEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred EEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 333 566665540 12222334566677776677766532 35678888899999888876 2222111 0
Q ss_pred CCCCeEEEEEecCCCcc----------hHHHHHHHhhcCceeccCc-ccchhh
Q psy10669 247 GTDVHLILIDLRKNKLT----------GSKVELVLEEIAIACNKNT-GISLAA 288 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~~----------~~~~~~~L~~~gI~v~~~~-girig~ 288 (337)
.....++.+.+....-+ +.++.+.|.+.||.+.+.. .|||..
T Consensus 368 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~iRi~~ 420 (448)
T 3dod_A 368 RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLP 420 (448)
T ss_dssp EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEETTEEEECC
T ss_pred EeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccCCEEEEEC
Confidence 12344666777542211 3567777777899997643 577753
No 200
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.71 E-value=5.3e-07 Score=87.26 Aligned_cols=153 Identities=9% Similarity=0.040 Sum_probs=91.8
Q ss_pred cEEEEcCccc--ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc---CC----chh
Q psy10669 125 DFLSSGTTCY--SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK---TG----EKI 178 (337)
Q Consensus 125 klII~~~S~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~---~G----g~i 178 (337)
++|++.+.+. +...+ +++|.++|+++|++|++|++|. .|-.+ + +.+..| .| |++
T Consensus 214 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~ 293 (419)
T 2eo5_A 214 AGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGAT 293 (419)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEE
T ss_pred EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEE
Confidence 4777765322 33344 7889999999999999999997 54332 1 111112 13 444
Q ss_pred hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669 179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID 256 (337)
Q Consensus 179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~ 256 (337)
+. ++. .+ .....+ .-+.++..+++...++..+. +..+++.++.++|.+.|.+. +..+. ....+++++
T Consensus 294 ~~~~~~~-~~-~~~~~~-t~~~n~~~~~aa~aal~~~~-----~~~~~~~~~~~~l~~~L~~~-~~~~~--~~g~~~~i~ 362 (419)
T 2eo5_A 294 IFRKDLD-FK-PGMHSN-TFGGNALACAIGSKVIDIVK-----DLLPHVNEIGKIFAEELQGL-ADDVR--GIGLAWGLE 362 (419)
T ss_dssp EEEGGGC-CC--------CCCCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTTS-SSEEE--EETTEEEEE
T ss_pred EEchHhh-cC-CcccCC-CCCCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHh-hhheE--eeeEEEEEE
Confidence 43 343 33 211222 22457777777777776542 27888999999999999876 33232 345567777
Q ss_pred ecCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669 257 LRKNKLTGSKVELVLEEIAIACNKNT--GISLAAE 289 (337)
Q Consensus 257 ~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~ 289 (337)
+...+.... +.+.|.+.||.+.+.. .+||..+
T Consensus 363 ~~~~~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~ 396 (419)
T 2eo5_A 363 YNEKKVRDR-IIGESFKRGLLLLPAGRSAIRVIPP 396 (419)
T ss_dssp CSCHHHHHH-HHHHHHHTTEECEEETTTEEEECCC
T ss_pred EecCccHHH-HHHHHHHCCCEEecCCCCEEEEECC
Confidence 742111244 6677778899998642 5788533
No 201
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.68 E-value=9.9e-07 Score=87.01 Aligned_cols=146 Identities=16% Similarity=0.180 Sum_probs=97.7
Q ss_pred EEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc----------------eeeeecc-----CCc-hhhh-
Q psy10669 126 FLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTK-----TGE-KILY- 180 (337)
Q Consensus 126 lII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~-----~Gg-~i~~- 180 (337)
+|+.+.+.|. ...|+++|.+||+++|++++||+||++=+.- .++|+|| .|| +++.
T Consensus 219 ~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~ 298 (501)
T 3hl2_A 219 CIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGF 298 (501)
T ss_dssp EEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEES
T ss_pred EEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeC
Confidence 3334455664 5589999999999999999999999874321 2567764 355 4433
Q ss_pred --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCC-CeEE
Q psy10669 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTD-VHLI 253 (337)
Q Consensus 181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~-~h~v 253 (337)
++.+++.. .+|+.+++ ...+.+.++++++-...|++..++-.+|+++|++.|++ .|-++.. |. |+|-
T Consensus 299 d~e~l~~~~~-~yPGr~S~---Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~--~~~n~is 372 (501)
T 3hl2_A 299 NDSFIQEISK-MYPGRASA---SPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLH--TPHNPIS 372 (501)
T ss_dssp CHHHHHHHHH-TSCSCBCS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCC--CTTCSSE
T ss_pred CHHHHHHHHH-hCCCCCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcC--CCCCcee
Confidence 45555543 57877643 44555666777777788899999999999999999998 5767764 43 5543
Q ss_pred -EEEecCCC----cchHHHHHHHhhcCce
Q psy10669 254 -LIDLRKNK----LTGSKVELVLEEIAIA 277 (337)
Q Consensus 254 -~V~~~~~~----~~~~~~~~~L~~~gI~ 277 (337)
-+.+...+ .+.-++...|...+|.
T Consensus 373 ~a~tl~~~~~~~~~~~t~~gs~Lf~r~vs 401 (501)
T 3hl2_A 373 LAMTLKTLDEHRDKAVTQLGSMLFTRQVS 401 (501)
T ss_dssp EEEECTTSCTTTSCHHHHHHHHHHHTTCC
T ss_pred EEEecccccccccccHHHHHHHHHhcCCC
Confidence 33343321 1234556666654443
No 202
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.68 E-value=1.3e-06 Score=84.69 Aligned_cols=154 Identities=8% Similarity=0.026 Sum_probs=91.2
Q ss_pred ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc---ccccc-----e----eeeecc------CCchh
Q psy10669 124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI---SGLIA-----G----VKGVTK------TGEKI 178 (337)
Q Consensus 124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~---~Gli~-----g----~~~T~~------~Gg~i 178 (337)
+++|++.+ +++ ...+ +++|+++|+++|++|++|++|+ .|-.. + +.+..| ..|++
T Consensus 201 ~~~vi~ep-~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~sK~~~~G~~~G~~ 279 (429)
T 4e77_A 201 VACIIVEP-VAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLGKIIGGGMPVGAF 279 (429)
T ss_dssp EEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEEGGGGTTSCCEEE
T ss_pred EEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCeeeecccccCCCCeEEE
Confidence 36777764 443 3444 7889999999999999999998 22111 1 111112 23444
Q ss_pred hh--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCCC
Q psy10669 179 LY--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGGTDV 250 (337)
Q Consensus 179 ~~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~t~~ 250 (337)
+. ++.+.+.+. .+-+..-+.++...++...++..+.+ +++.+++.++.+++++.|.+. ++..... ...
T Consensus 280 ~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g 355 (429)
T 4e77_A 280 GGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEENIPLVVN-HVG 355 (429)
T ss_dssp EECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE-EET
T ss_pred EECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-Eee
Confidence 43 455544432 11111225677777777777776632 467888888888888888762 4432111 234
Q ss_pred eEEEEEecCCC-------------cchHHHHHHHhhcCceeccCc
Q psy10669 251 HLILIDLRKNK-------------LTGSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 251 h~v~V~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~ 282 (337)
.++.+.+.... ....++.+.|.+.||.+.+..
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 400 (429)
T 4e77_A 356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA 400 (429)
T ss_dssp TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST
T ss_pred eEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC
Confidence 46667665431 112566677777799998754
No 203
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.66 E-value=4.7e-07 Score=88.43 Aligned_cols=150 Identities=8% Similarity=-0.031 Sum_probs=89.9
Q ss_pred ccEEEEcCccc--ccccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCchh
Q psy10669 124 FDFLSSGTTCY--SRCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEKI 178 (337)
Q Consensus 124 pklII~~~S~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~i 178 (337)
+++|++.+... +...+ +++|+++|+++|++|++|++|+ |+.. + +.+..| .+|++
T Consensus 202 ~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~v 280 (453)
T 2cy8_A 202 IAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLTCLAKASAGGLPGGIL 280 (453)
T ss_dssp EEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEEEEEGGGGTTSSCEEE
T ss_pred EEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEEEEChhhhCCcceEEE
Confidence 35777765322 44556 8899999999999999999997 6621 1 111112 23444
Q ss_pred hh--hHHHHHhh---c-cCCCCCCCCcHHHHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHhC----CCEE-ecC
Q psy10669 179 LY--DYEEKINN---A-VFPSLQGGPHNHAIGAIATAMLQ-AQSDEFKSYQAQVKANASHLSDEMIKR----GYHV-VTG 246 (337)
Q Consensus 179 ~~--~l~~~i~~---~-~~p~~~g~~~~~~iaala~a~~e-~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v-~~~ 246 (337)
+. ++.+.+.. . .+-+..-+.++...++...++.. + . +++.+++.++.++|.+.|.+. ++.. +.
T Consensus 281 ~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~- 355 (453)
T 2cy8_A 281 GGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFARKGLNWLAY- 355 (453)
T ss_dssp EECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE-
T ss_pred echHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-
Confidence 44 45444443 1 11111224566667776666665 4 2 346778888899998888763 5422 22
Q ss_pred CCCCeEEEEEecC-----C-------------CcchHHHHHHHhhcCceecc
Q psy10669 247 GTDVHLILIDLRK-----N-------------KLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 247 ~t~~h~v~V~~~~-----~-------------~~~~~~~~~~L~~~gI~v~~ 280 (337)
....++++.+.. . .....++.+.|.+.||.+.+
T Consensus 356 -~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~ 406 (453)
T 2cy8_A 356 -GRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGG 406 (453)
T ss_dssp -CCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBT
T ss_pred -EeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeC
Confidence 344577888864 1 11245677777778999954
No 204
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.65 E-value=2.1e-07 Score=90.27 Aligned_cols=154 Identities=16% Similarity=0.031 Sum_probs=98.1
Q ss_pred ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------cc---------
Q psy10669 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------NN--------- 121 (337)
Q Consensus 70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------~~--------- 121 (337)
++....++| +++++++|.+. .+.++||+.|+.++ .+++++ ..
T Consensus 65 ~~p~~~~l~----~~la~l~g~~~-----~~~~~sG~~Ai~~~-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~ 134 (400)
T 3nmy_A 65 HNPTRFAYE----RCVAALEGGTR-----AFAFASGMAATSTV-MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDF 134 (400)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEE
T ss_pred CCHHHHHHH----HHHHHHhCCCC-----EEEecCHHHHHHHH-HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEE
Confidence 445556777 57889999874 68889999898874 666654 00
Q ss_pred -------------c---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc-
Q psy10669 122 -------------A---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK- 173 (337)
Q Consensus 122 -------------a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~- 173 (337)
+ ++++|++. .++ .+...|+++|.++|+++|++|++|++|..|... .++.+ +|
T Consensus 135 ~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~ 214 (400)
T 3nmy_A 135 SFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKY 214 (400)
T ss_dssp EEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTT
T ss_pred EEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccc
Confidence 0 25777775 222 357889999999999999999999999877643 12322 22
Q ss_pred -------CCc-hhh-h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 174 -------TGE-KIL-Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 174 -------~Gg-~i~-~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
.|| .++ . ++.+.+..... ....+++ +.-++++ +..+ .....+.++..+|++++++.|.+.
T Consensus 215 l~g~g~~~gG~~vv~~~~~~~~~l~~~~~-~~g~~~~-~~~a~~~--l~~l--~~l~~r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 215 LNGHSDMVGGIAVVGDNAELAEQMAFLQN-SIGGVQG-PFDSFLA--LRGL--KTLPLRMRAHCENALALAQWLETH 285 (400)
T ss_dssp TTCSSSCCCEEEEECSCHHHHHHHHHHHH-HHCCBCC-HHHHHHH--HHHH--TTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCcceeEEEEeCCHHHHHHHHHHHH-hcCCCCC-HHHHHHH--HHhH--hHHHHHHHHHHHHHHHHHHHHHcC
Confidence 256 443 2 45555443211 1111222 2222222 2222 235677888999999999999874
No 205
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.65 E-value=3.3e-07 Score=90.71 Aligned_cols=175 Identities=13% Similarity=0.100 Sum_probs=104.4
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhhC---C
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKAL---P 118 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aLl---~ 118 (337)
+|.|.+|+...+.+-.. +..-+....+++ +++++.+..-. .|+| .|||.||.+.+.... +
T Consensus 105 hp~v~~Av~~q~~~~~~-------~~~~~~~~~~la----e~l~~~~p~~~-----~v~f~~SGsEA~e~AiklAr~~tg 168 (454)
T 4ao9_A 105 APEIRDAVIEAMQGGIN-------LTGHNLLEGRLA----RLICERFPQIE-----QLRFTNSGTEANLMALTAALHFTG 168 (454)
T ss_dssp CHHHHHHHHHHHHTCSC-------CCSEESSHHHHH----HHHHHHSTTCS-----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCCC-------ccCCcHHHHHHH----HHHHHhCCCCC-----EEEEeCchHHHHHHHHHHHHhccc
Confidence 89999999876543111 111123333444 56777775332 3556 688999988876541 0
Q ss_pred -c----------------------------------------c--ccc----ccEEEEcCccccccc---C----hHHHH
Q psy10669 119 -T----------------------------------------N--NAR----FDFLSSGTTCYSRCL---D----YARFR 144 (337)
Q Consensus 119 -~----------------------------------------~--~a~----pklII~~~S~~~~~~---d----~~~l~ 144 (337)
+ + +.+ ...||+. .+.++.+ + ++.|+
T Consensus 169 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvE-Pv~g~~G~~~p~~~fL~~lr 247 (454)
T 4ao9_A 169 RRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIERHGPEIAVVLVE-PMQGASGCIPGQPDFLQALR 247 (454)
T ss_dssp CCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHHHTGGGEEEEEEC-SEESTTTCEECCHHHHHHHH
T ss_pred CCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHhhcCCceEEEEec-cccCCCCccCCchhhHHHHH
Confidence 0 0 011 3567775 3554433 3 66799
Q ss_pred HHhhhcCCeEEEeccccccccc--------ee----eeecc-------CCchhhh-hHHHHHhhccCCCCC-C--CCcHH
Q psy10669 145 QICDETDSIMFADMSHISGLIA--------GV----KGVTK-------TGEKILY-DYEEKINNAVFPSLQ-G--GPHNH 201 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~--------g~----~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~-g--~~~~~ 201 (337)
+||+++|++||+|+.|+ |-.+ |+ +..+| -|+++.. ++.+.+.+...|..+ + +.|+.
T Consensus 248 ~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~gK~lggG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPl 326 (454)
T 4ao9_A 248 ESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLGKYIGGGMSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVM 326 (454)
T ss_dssp HHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEEGGGGTTSSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHH
T ss_pred HHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEeccccCCCCcceeeeeHHHHHHHHhhccCCccccCCCCCCHH
Confidence 99999999999999997 6444 11 11122 2333322 565655543222222 1 24566
Q ss_pred HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
.+|+..+++..+.+ ++..+++.++.++|+++|++
T Consensus 327 a~AAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 327 TMAAGYAGLTKLFT---PEAAGALAERGEALRARLNA 360 (454)
T ss_dssp HHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHH
Confidence 66666666666643 46678899999999999876
No 206
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.64 E-value=2.9e-07 Score=88.86 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=96.9
Q ss_pred HHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------c-----cc-
Q psy10669 81 AQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------N-----NA- 122 (337)
Q Consensus 81 ~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------~-----~a- 122 (337)
+++++++++|.+. .+.++||+.||..++. ++++ . +.
T Consensus 60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~ 133 (393)
T 1n8p_A 60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQ 133 (393)
T ss_dssp HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHH
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCChHHHHH
Confidence 3468899999874 6899999999888888 7654 0 00
Q ss_pred ----cccEEEEcCcc--cccccChHHHHHHhhhc----CCeEEEeccccccccc--------eeeeec-c----CC----
Q psy10669 123 ----RFDFLSSGTTC--YSRCLDYARFRQICDET----DSIMFADMSHISGLIA--------GVKGVT-K----TG---- 175 (337)
Q Consensus 123 ----~pklII~~~S~--~~~~~d~~~l~eia~~~----ga~l~vD~AH~~Gli~--------g~~~T~-~----~G---- 175 (337)
++++|++..-+ .+...|+++|.++|+++ |+++++|++|..|... .++++. | .|
T Consensus 134 ~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rig 213 (393)
T 1n8p_A 134 LIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVL 213 (393)
T ss_dssp HSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCC
T ss_pred hcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCcee
Confidence 15777775322 35788999999999999 9999999999987653 233333 2 23
Q ss_pred chhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669 176 EKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240 (337)
Q Consensus 176 g~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G 240 (337)
|+++. ++.+.+.....+ ..+++.+...+++..++ .......++..+|++.+++.|.+.+
T Consensus 214 G~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~ 275 (393)
T 1n8p_A 214 GVLATNNKPLYERLQFLQNA-IGAIPSPFDAWLTHRGL-----KTLHLRVRQAALSANKIAEFLAADK 275 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred EEEEeCCHHHHHHHHHHHHh-cCCCCCHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 76664 355555433221 11223322222222222 2345677888999999999998864
No 207
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=98.63 E-value=7.6e-07 Score=87.34 Aligned_cols=158 Identities=13% Similarity=0.070 Sum_probs=91.1
Q ss_pred cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC-----ch
Q psy10669 125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG-----EK 177 (337)
Q Consensus 125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G-----g~ 177 (337)
++||+.+ +++.. .+ +++|+++|+++|++||+|++|+ .|-.+ ++ ..|. | .| |+
T Consensus 221 ~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~ 299 (459)
T 4a6r_A 221 AAFVGEP-IQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGA 299 (459)
T ss_dssp EEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEE
T ss_pred EEEEECC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCccc
Confidence 5677764 55443 33 6889999999999999999997 43332 11 1122 2 12 33
Q ss_pred hhh--hHHHHHhhccCCC---CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHH-Hh-CC---CEEecC
Q psy10669 178 ILY--DYEEKINNAVFPS---LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK-ANASHLSDEM-IK-RG---YHVVTG 246 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~---~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~-~na~~l~~~L-~~-~G---~~v~~~ 246 (337)
++. ++.+.+... .+. ..-+.++...++..+++..+.+ +++.+++. ++.+++++.| .. .+ +..+.
T Consensus 300 v~~~~~i~~~~~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~- 374 (459)
T 4a6r_A 300 VFVGKRVAEGLIAG-GDFNHGFTYSGHPVCAAVAHANVAALRD---EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVR- 374 (459)
T ss_dssp EEECHHHHHHHHHH-CTTHHHHHHCSCHHHHHHHHHHHHHHHH---TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEE-
T ss_pred eeeCHHHHHHhhcC-CCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-
Confidence 333 566655521 111 1224556666666666665532 35677788 8888888888 43 22 22222
Q ss_pred CCCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669 247 GTDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT-GISLAAE 289 (337)
Q Consensus 247 ~t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~-girig~~ 289 (337)
...-++.+++....- ...++.+.|.+.||.+.+.. .|||..+
T Consensus 375 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~~~ 427 (459)
T 4a6r_A 375 -GVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACGDHIVSAPP 427 (459)
T ss_dssp -EETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEETTEEEECCC
T ss_pred -EEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCCCEEEEECC
Confidence 223355666643211 15567777777899988643 5777644
No 208
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.63 E-value=5.7e-06 Score=79.91 Aligned_cols=153 Identities=12% Similarity=0.044 Sum_probs=91.3
Q ss_pred ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCch
Q psy10669 124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEK 177 (337)
Q Consensus 124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~ 177 (337)
+++|++.+ .++ ...+ +++|+++|+++|++|++|++|+ |+.. + +.+..| ..|+
T Consensus 200 ~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~~G~ 277 (427)
T 3fq8_A 200 IAGVILEP-IVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GFRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGA 277 (427)
T ss_dssp EEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BTTTBTTHHHHHTTCCCSEEEECGGGGTTSSCEE
T ss_pred EEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCcchhhHhcCCCCChhhhhhhhhCCcceEE
Confidence 46777764 443 3555 8899999999999999999997 5411 1 111112 1344
Q ss_pred hhh--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCC
Q psy10669 178 ILY--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGGTD 249 (337)
Q Consensus 178 i~~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~t~ 249 (337)
++. ++.+.+.+. .+-+..-+.++...++...++..+.+ +++.+++.++.+++.+.|.+. ++..... ..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~ 353 (427)
T 3fq8_A 278 YGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETGHAACGG-QV 353 (427)
T ss_dssp EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE-EE
T ss_pred EEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE-Ee
Confidence 443 455555432 11111223477777777777766533 467888888999988888763 3321110 23
Q ss_pred CeEEEEEecCCCcc------------hHHHHHHHhhcCceeccCc
Q psy10669 250 VHLILIDLRKNKLT------------GSKVELVLEEIAIACNKNT 282 (337)
Q Consensus 250 ~h~v~V~~~~~~~~------------~~~~~~~L~~~gI~v~~~~ 282 (337)
..++.+.+...... ..++.+.|.+.||.+.+..
T Consensus 354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~ 398 (427)
T 3fq8_A 354 SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ 398 (427)
T ss_dssp TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST
T ss_pred eeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCC
Confidence 44566666443222 3466777777899998754
No 209
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=98.61 E-value=2.6e-06 Score=81.00 Aligned_cols=156 Identities=13% Similarity=0.091 Sum_probs=89.0
Q ss_pred cEEEEc-Ccc-cccccChH---HHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC-
Q psy10669 125 DFLSSG-TTC-YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG- 175 (337)
Q Consensus 125 klII~~-~S~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G- 175 (337)
+++++. +.+ .++..+.+ +|.++|+++|+++++|++|.-...+ .+.+|. | .|
T Consensus 175 ~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 254 (397)
T 3fsl_A 175 IVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGE 254 (397)
T ss_dssp EEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGG
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCC
Confidence 566654 222 34665555 6778899999999999998654432 122333 2 13
Q ss_pred --chhh---h--hHHHH----HhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669 176 --EKIL---Y--DYEEK----INNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKR 239 (337)
Q Consensus 176 --g~i~---~--~l~~~----i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~ 239 (337)
|+++ . ++.+. +....... .++++....++++.++... .....++.++++.++.++|.+.|.+.
T Consensus 255 riG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 255 RVGGLSVMCEDAEAAGRVLGQLKATVRRN-YSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTE 333 (397)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHTT-TSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEecCCHHHHHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5553 1 23322 22211111 2334444444444433321 02334677888999999999999985
Q ss_pred ----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 240 ----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 240 ----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
|+++.... .+..+++.+ +...+...|+++||.+.+. -||+..
T Consensus 334 ~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g--~Ris~~ 379 (397)
T 3fsl_A 334 MPERNFDYLLNQ-RGMFSYTGL-----SAAQVDRLREEFGVYLIAS--GRMCVA 379 (397)
T ss_dssp CTTSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHTTCEECCTT--CEEEGG
T ss_pred CCCCCceeecCC-ceEEEecCC-----CHHHHHHHHHhCCEEECCC--CeEEEE
Confidence 67665421 122333333 4567888898999999873 377654
No 210
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.60 E-value=3.2e-06 Score=81.41 Aligned_cols=253 Identities=13% Similarity=0.043 Sum_probs=137.1
Q ss_pred hhhhhcHHHHHHHHHHHhhcccceeeeccCCC-----CCHHHHHHHh--hhhhhccCCCCCCCcCc-CccchHHHHHHHH
Q psy10669 10 TLAQTDPELYSLIKKEKHRQINGIELIASENF-----TSLAVLECLG--SCLQNKYSEGLPGKRYY-GGNQFIDEIEIVA 81 (337)
Q Consensus 10 ~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~-----~~p~V~~a~~--~~l~~~y~~g~~g~r~~-~G~~~~~~lE~~~ 81 (337)
.++.+.+.++....+-..+ ...|+|-...-- .+|.+++++. ..+.+ +..- ..| ....-..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~----~~~~-~~Yp~~~~g~~~lr--- 76 (423)
T 3ez1_A 6 ASRPALDLARQAYEAFKAR-GLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMD----GLDL-RNYPGGVAGLPSAR--- 76 (423)
T ss_dssp CCHHHHHHHHHHHHHHHHH-TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEET----TEET-TSSCSCTTCCHHHH---
T ss_pred HHHHHHHHHHHHHHHhhcC-CceEecCCCCCChHhCCCcHHHHHHHhhhHHhhc----chhh-hCCCCCCCChHHHH---
Confidence 3455556666555443333 356777665544 3557777774 22221 1100 112 2222223443
Q ss_pred HHHHHhhcCCCCCCCcceeecCCCc-hhHH--HHHHhhCC-------------c--------------------------
Q psy10669 82 QQRSLKAFNLDPEQWGCNVQPYSGS-PANF--AVCEKALP-------------T-------------------------- 119 (337)
Q Consensus 82 ~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~--~v~~aLl~-------------~-------------------------- 119 (337)
+.++++++++. .+|.+++|+ .++. .++.+++. +
T Consensus 77 -~~ia~~~~~~~----~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 151 (423)
T 3ez1_A 77 -ALFAGYLDVKA----ENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV 151 (423)
T ss_dssp -HHHHHHTTSCG----GGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEE
T ss_pred -HHHHHHhCCCh----hhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEec
Confidence 57788999876 368888885 5664 55666532 2
Q ss_pred --------------cc---ccccEEEEcC--cc-cccccChH---HHHHHh-hhcCCeEEEeccccccccc---------
Q psy10669 120 --------------NN---ARFDFLSSGT--TC-YSRCLDYA---RFRQIC-DETDSIMFADMSHISGLIA--------- 166 (337)
Q Consensus 120 --------------~~---a~pklII~~~--S~-~~~~~d~~---~l~eia-~~~ga~l~vD~AH~~Gli~--------- 166 (337)
.+ .++++|++.+ .+ .+...+.+ +|.++| +++|+++++|++|....+.
T Consensus 152 ~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~ 231 (423)
T 3ez1_A 152 DMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVN 231 (423)
T ss_dssp EEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCC
T ss_pred cCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcc
Confidence 11 1267887653 22 35677776 677788 8999999999999831110
Q ss_pred --------------eeeeeccC-------Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH-H--hchhhHH
Q psy10669 167 --------------GVKGVTKT-------GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ-A--QSDEFKS 220 (337)
Q Consensus 167 --------------g~~~T~~~-------Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e-~--~~~~~~~ 220 (337)
.+.+|..| .|+++. ++.+.+....... ..+++....++.+.++.. . .....++
T Consensus 232 ~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 310 (423)
T 3ez1_A 232 FVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQ-SIGPNKVEQARHVKFLTEYPGGLEGLMRD 310 (423)
T ss_dssp HHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHHHS-CSCCCHHHHHHHHHHHHHSTTHHHHHHHH
T ss_pred hhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHhhh-ccCCCHHHHHHHHHHHHhccchHHHHHHH
Confidence 12233322 255544 4655555432212 223455555555555544 1 0122233
Q ss_pred HHHHHHHHHHHHHHHHH----hCC--CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 221 YQAQVKANASHLSDEMI----KRG--YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 221 y~~~v~~na~~l~~~L~----~~G--~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.++.+.++.+.+.+.|. +.| +++.. ......+++++... +...+.+.|.+.||.+.+
T Consensus 311 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~ 373 (423)
T 3ez1_A 311 HAAIIAPKFRAVDEVLRAELGEGGEYATWTL-PKGGYFISLDTAEP--VADRVVKLAEAAGVSLTP 373 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTSSEEECC-CSBSSCEEEEESSS--CHHHHHHHHHHTTEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCceEEeC-CCccEEEEEECCCC--cHHHHHHHHHHCCcEEec
Confidence 44444445555554444 455 66543 23455677888653 577888899999999987
No 211
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=98.59 E-value=1.4e-06 Score=85.45 Aligned_cols=158 Identities=11% Similarity=0.056 Sum_probs=92.1
Q ss_pred cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC----chh
Q psy10669 125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG----EKI 178 (337)
Q Consensus 125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G----g~i 178 (337)
.+||+.+ ++++. .+ +++|+++|+++|++||+|++|. .|-.+ ++ ..|. | .+ |++
T Consensus 227 aavi~ep-~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G~~~G~~ 305 (453)
T 4ffc_A 227 AAIIIEP-IQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGGMPLSAV 305 (453)
T ss_dssp EEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEE
T ss_pred EEEEEcC-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCCcCeEEE
Confidence 5666654 55543 23 6679999999999999999996 33322 11 1121 2 11 333
Q ss_pred hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCCe
Q psy10669 179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDVH 251 (337)
Q Consensus 179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~h 251 (337)
+. ++.+.+.+....+.+ +.++...++..+++..+.+ +++.+++.++.+++++.|.+. ++..+. ....
T Consensus 306 ~~~~~i~~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~ 379 (453)
T 4ffc_A 306 TGRAELMDAVYAGGLGGTY-GGNPVTCAAAVAALGVMRE---LDLPARARAIEASVTSRLSALAEEVDIIGEVR--GRGA 379 (453)
T ss_dssp EEEHHHHTTSCTTSSCCSS-SSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEE--EETT
T ss_pred EECHHHHhhhcccCcCCCC-CcCHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE--eece
Confidence 33 455555443222223 4456666666666665532 367788888888888888762 222222 2344
Q ss_pred EEEEEecC------CCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669 252 LILIDLRK------NKLTGSKVELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 252 ~v~V~~~~------~~~~~~~~~~~L~~~gI~v~~~~----girig~~ 289 (337)
++.+.+.. ......++.+.|.+.||.+.+.. .+||..+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~ 427 (453)
T 4ffc_A 380 MLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPP 427 (453)
T ss_dssp EEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCC
T ss_pred EEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECC
Confidence 66677643 11235566677777899987632 4666533
No 212
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=98.58 E-value=2.3e-06 Score=82.64 Aligned_cols=157 Identities=13% Similarity=0.135 Sum_probs=88.5
Q ss_pred ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC
Q psy10669 124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG 175 (337)
Q Consensus 124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G 175 (337)
+++|++..-.+ +...+ +++|.++|+++|+++++|++|.-...+ .++++. | .|
T Consensus 196 ~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 275 (420)
T 4f4e_A 196 TIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYG 275 (420)
T ss_dssp CEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcC
Confidence 35666642222 35544 446678899999999999998533221 122333 2 13
Q ss_pred ---chhh---h--hHHH----HHhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669 176 ---EKIL---Y--DYEE----KINNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIK 238 (337)
Q Consensus 176 ---g~i~---~--~l~~----~i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~ 238 (337)
|+++ . ++.+ .+....... .++++....++.+.++... .....++.++++.++.++|.+.|.+
T Consensus 276 ~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 354 (420)
T 4f4e_A 276 ERVGALSIITDSKDEAARVLSQLKRVIRTN-YSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKA 354 (420)
T ss_dssp GCEEEEEEECSSHHHHHHHHHHHHHHHHTT-TSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEcCCHHHHHHHHHHHHHHHhcc-cCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5542 1 2322 232222222 2233444444444333321 0223467788899999999999998
Q ss_pred C----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 239 R----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 239 ~----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
. |+++... ..+-.+++. ++...+...|++.||.+.+ +.||+..
T Consensus 355 ~~~~~~~~~~~~-~~g~~~~~~-----~~~~~~~~~l~~~gI~v~~--~~Ris~~ 401 (420)
T 4f4e_A 355 AGIERDFSFINA-QRGMFSYSG-----LTSAQVDRLREEFGIYAVS--TGRICVA 401 (420)
T ss_dssp TTCSSCCTHHHH-SCSSEEECC-----CCHHHHHHHHHHHCEECCT--TSEEEGG
T ss_pred cCCCCCceeECC-CccEEEEeC-----CCHHHHHHHHHhCCEEecC--CCeEEEe
Confidence 6 6665542 112233332 3567788888889999987 5688654
No 213
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.57 E-value=2.4e-06 Score=83.67 Aligned_cols=159 Identities=11% Similarity=0.067 Sum_probs=92.6
Q ss_pred ccEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CC----ch
Q psy10669 124 FDFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TG----EK 177 (337)
Q Consensus 124 pklII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~G----g~ 177 (337)
+++||+.+ +++.. .+ +++|+++|+++|++||+|++|. .|-.+ + +.+..| .+ |+
T Consensus 228 ~aavi~ep-~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~iG~ 306 (451)
T 3oks_A 228 LAAVVIEP-IQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGGLPLSA 306 (451)
T ss_dssp EEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCEE
T ss_pred EEEEEEcC-CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCCcceEE
Confidence 35677754 55433 23 6789999999999999999996 33222 1 111112 12 23
Q ss_pred hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCC
Q psy10669 178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDV 250 (337)
Q Consensus 178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~ 250 (337)
++. ++.+.+.+..... +.+.++...++...++..+.+ +++.+++.++.+++++.|.+. ++..+. ...
T Consensus 307 v~~~~~~~~~~~~~~~~~-t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~G 380 (451)
T 3oks_A 307 VTGRAEIMDSPHVSGLGG-TYGGNPIACAAALATIETIES---EGLVARAQQIEKIMKDRLGRLQAEDDRIGDVR--GRG 380 (451)
T ss_dssp EEEEHHHHTCSCTTSBCC-SSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EET
T ss_pred EEECHHHHhhhcCCCcCC-CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE--Eee
Confidence 333 4555444332222 224566666666666666532 367888888888888888763 222222 233
Q ss_pred eEEEEEecC------CCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669 251 HLILIDLRK------NKLTGSKVELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 251 h~v~V~~~~------~~~~~~~~~~~L~~~gI~v~~~~----girig~~ 289 (337)
.++.+.+.. .......+.+.|.+.||.+.+.. .+||..+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~ 429 (451)
T 3oks_A 381 AMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPP 429 (451)
T ss_dssp TEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCC
T ss_pred EEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECC
Confidence 466677643 12235566777778899987632 4666533
No 214
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.54 E-value=2.5e-06 Score=81.84 Aligned_cols=146 Identities=11% Similarity=0.099 Sum_probs=89.7
Q ss_pred ccccC---hHHHHHHhhhcCCeEEEeccccc----c----c--c-c-----e------eeeec-c----CC---chhh--
Q psy10669 135 SRCLD---YARFRQICDETDSIMFADMSHIS----G----L--I-A-----G------VKGVT-K----TG---EKIL-- 179 (337)
Q Consensus 135 ~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G----l--i-~-----g------~~~T~-~----~G---g~i~-- 179 (337)
+...+ +++|.++|+++|+++++|++|.. | . + . . +.+|. | .| |+++
T Consensus 190 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~ 269 (412)
T 1yaa_A 190 GLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLA 269 (412)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEE
Confidence 45554 44677889999999999999942 1 0 1 0 1 13333 2 24 5554
Q ss_pred h-------h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCC---
Q psy10669 180 Y-------D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRG--- 240 (337)
Q Consensus 180 ~-------~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G--- 240 (337)
+ + +.+.+.....+ ..++++.+..+++..++.... ....++.++++.++.++|.+.|.+.|
T Consensus 270 ~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 348 (412)
T 1yaa_A 270 LTKQAQNKTIKPAVTSQLAKIIRS-EVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPG 348 (412)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHT-TTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred ecCCCCCHHHHHHHHHHHHHHHhh-ccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 2 2 55555543222 234556666666666665431 12456778888899999999998865
Q ss_pred -CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 241 -YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 241 -~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
+++....+ +-.+++. ++...+...|++.||.+.+ .+||+..
T Consensus 349 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~l~~~gi~v~~--~~Ris~~ 390 (412)
T 1yaa_A 349 NWDHIVNQC-GMFSFTG-----LTPQMVKRLEETHAVYLVA--SGRASIA 390 (412)
T ss_dssp CCTHHHHCC-SSEEECC-----CCHHHHHHHHHHHCEECCT--TSEEEGG
T ss_pred CeeeeccCc-eEEEeeC-----CCHHHHHHHHHhCCEEecc--CcEEEEc
Confidence 77654212 2223332 3456677778788999987 6898764
No 215
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.53 E-value=1.3e-06 Score=84.53 Aligned_cols=163 Identities=11% Similarity=0.023 Sum_probs=102.4
Q ss_pred ccEEEEcCccc--ccccC---hHHHHHHhhh-----cCCeEEEeccccccccc----------------e---e--eeec
Q psy10669 124 FDFLSSGTTCY--SRCLD---YARFRQICDE-----TDSIMFADMSHISGLIA----------------G---V--KGVT 172 (337)
Q Consensus 124 pklII~~~S~~--~~~~d---~~~l~eia~~-----~ga~l~vD~AH~~Gli~----------------g---~--~~T~ 172 (337)
+++|++..-.+ +...| +++|.++|++ +|+++++|++|...... . + .+|.
T Consensus 190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 269 (430)
T 2x5f_A 190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGA 269 (430)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEH
T ss_pred CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEec
Confidence 45655542233 46666 6778889999 99999999999742111 1 1 2222
Q ss_pred -c----CC---chhhh-----hHHHHHhhccCC---CCCCCCcHHHHHHHHHHHH-HHh-chhhHHHHHHHHHHHHHHHH
Q psy10669 173 -K----TG---EKILY-----DYEEKINNAVFP---SLQGGPHNHAIGAIATAML-QAQ-SDEFKSYQAQVKANASHLSD 234 (337)
Q Consensus 173 -~----~G---g~i~~-----~l~~~i~~~~~p---~~~g~~~~~~iaala~a~~-e~~-~~~~~~y~~~v~~na~~l~~ 234 (337)
| .| |+++. ++.+.+.....+ ....+++++..+++..++. ... ..+.+..++++.++.++|.+
T Consensus 270 sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (430)
T 2x5f_A 270 TKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKE 349 (430)
T ss_dssp HHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 12 55543 455555433211 0233567777777777775 310 12234478888999999999
Q ss_pred HHH----hCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh-cCceeccC--cccchhhh
Q psy10669 235 EMI----KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKN--TGISLAAE 289 (337)
Q Consensus 235 ~L~----~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~--~girig~~ 289 (337)
.|. +.|+++..+ ..+..+++++. +.+..++.+.|.+ .||.+.+. ..+||+..
T Consensus 350 ~L~~~~~~~g~~~~~~-~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~ 408 (430)
T 2x5f_A 350 VVYADQYHSHWQAYDF-NSGYFMAIKVH--DVDPEALRKHLIDKYSIGVIALNATDIRIAFS 408 (430)
T ss_dssp HHTCGGGTTTEEECCC-CBSSEEEEEES--SSCHHHHHHHHHHHHCEECEECSSSEEEEEGG
T ss_pred HHHhhCCCCCceeeCC-CceEEEEeCCC--CCCHHHHHHHHHHhCCEEEecCCCCeEEEEEe
Confidence 998 668877642 22345778876 5577788888876 89999863 36898765
No 216
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.52 E-value=1.7e-06 Score=82.23 Aligned_cols=142 Identities=13% Similarity=0.074 Sum_probs=85.2
Q ss_pred ChHHHHHHhhhcCCeEEEeccccccccc--------------e----eeeec-c----CC---chhhh-----hH----H
Q psy10669 139 DYARFRQICDETDSIMFADMSHISGLIA--------------G----VKGVT-K----TG---EKILY-----DY----E 183 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g----~~~T~-~----~G---g~i~~-----~l----~ 183 (337)
++++|.++|+++|+++++|++|.....+ + +.+|. | .| |+++. ++ .
T Consensus 190 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~ 269 (394)
T 2ay1_A 190 QWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQ 269 (394)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHH
Confidence 3456778899999999999999853321 1 23343 3 13 44432 22 2
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEEE
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLIL 254 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v~ 254 (337)
+.+...... .++++++...++...++... .....++.++++.++.++|.+.|.+.| +++..... ...++
T Consensus 270 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~ 347 (394)
T 2ay1_A 270 GAMAFLNRQ-TYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHR-GMFSR 347 (394)
T ss_dssp HHHHHHHHT-TTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCC-SSEEE
T ss_pred HHHHHHHhh-hcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCc-eEEEe
Confidence 223222112 23345556666665555432 112456778888888999999998864 66554211 33344
Q ss_pred EEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 255 IDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 255 V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
+.+ +...+...|++.||.+.+ |+||+..
T Consensus 348 ~~~-----~~~~~~~~l~~~gi~v~~--~~Ris~~ 375 (394)
T 2ay1_A 348 LGA-----TPEQVKRIKEEFGIYMVG--DSRINIA 375 (394)
T ss_dssp CCC-----CHHHHHHHHHHHCEECCT--TCEEEGG
T ss_pred eCC-----CHHHHHHHHHhCCEEecC--CCeEEee
Confidence 443 345677888889999987 7899765
No 217
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.44 E-value=3.4e-06 Score=80.11 Aligned_cols=143 Identities=11% Similarity=0.089 Sum_probs=85.9
Q ss_pred ChHHHHHHhhhcCCeEEEecccccccc-------c-----------eeeeeccC-----C---chhh----h-----hHH
Q psy10669 139 DYARFRQICDETDSIMFADMSHISGLI-------A-----------GVKGVTKT-----G---EKIL----Y-----DYE 183 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~Gli-------~-----------g~~~T~~~-----G---g~i~----~-----~l~ 183 (337)
++++|.++|+++|+++++|++|..... . .+.+|.+| | |+++ . ++.
T Consensus 193 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~ 272 (396)
T 2q7w_A 193 QWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAF 272 (396)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHH
Confidence 345677889999999999999875322 1 12334322 3 5554 2 133
Q ss_pred HHHhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEEE
Q psy10669 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLIL 254 (337)
Q Consensus 184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v~ 254 (337)
+.+.....+ ..+++++...++...++... .....++.++++.++.++|.+.|.+.| +++..+.+ +..++
T Consensus 273 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~ 350 (396)
T 2q7w_A 273 SQMKAAIRA-NYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN-GMFSF 350 (396)
T ss_dssp HHHHHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC-SSEEE
T ss_pred HHHHHHHhh-ccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC-ceEEE
Confidence 333332222 23455666666666555332 012345667788899999999999977 66543211 22344
Q ss_pred EEecCCCcchHHHHHHHhhcCceeccCcccchhhhh
Q psy10669 255 IDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEI 290 (337)
Q Consensus 255 V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~ 290 (337)
+.+ +...+...|++.||.+.+ |+||+...
T Consensus 351 ~~~-----~~~~~~~~l~~~gv~v~~--~~Ris~~~ 379 (396)
T 2q7w_A 351 SGL-----TKEQVLRLREEFGVYAVA--SGRVNVAG 379 (396)
T ss_dssp CCC-----CHHHHHHHHHHHCEECCT--TCEEEGGG
T ss_pred ecC-----CHHHHHHHHHhcCeeecC--CceEEEee
Confidence 433 345677888888999987 78997653
No 218
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=98.43 E-value=1.7e-06 Score=85.55 Aligned_cols=183 Identities=13% Similarity=0.045 Sum_probs=105.4
Q ss_pred HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------cc--c
Q psy10669 83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------NN--A 122 (337)
Q Consensus 83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------~~--a 122 (337)
+++++++|.+. .+.++||+.|+..++. ++++ .+ +
T Consensus 140 ~~la~~~g~~~-----~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~ 213 (464)
T 1ibj_A 140 SLLAKLDKADR-----AFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAA 213 (464)
T ss_dssp HHHHHHHTCSE-----EEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHH
T ss_pred HHHHHHhCCCe-----EEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHH
Confidence 57889999863 5788899888877665 5543 00 0
Q ss_pred ---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--------CCchhhh
Q psy10669 123 ---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K--------TGEKILY 180 (337)
Q Consensus 123 ---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~--------~Gg~i~~ 180 (337)
++++|++.. ++ .+...|+++|.++|+++|+++++|++|..|... .++++. | .+|+++.
T Consensus 214 i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~ 293 (464)
T 1ibj_A 214 IGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAV 293 (464)
T ss_dssp CCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred hccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEE
Confidence 267888763 33 368889999999999999999999999988652 133333 3 1255553
Q ss_pred ---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---------------CCE
Q psy10669 181 ---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---------------GYH 242 (337)
Q Consensus 181 ---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---------------G~~ 242 (337)
++.+.+..... ...++.++...++...++. ....+.++..+|++.+++.|.+. |++
T Consensus 294 ~~~~l~~~l~~~~~-~~g~~~~~~~~~a~~~al~-----~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~ 367 (464)
T 1ibj_A 294 KGEKLAKEVYFLQN-SEGSGLAPFDCWLCLRGIK-----TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHH 367 (464)
T ss_dssp CSHHHHHHHHHHHH-HTTCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHH
T ss_pred ChHHHHHHHHHHHH-hcCCCCCHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchH
Confidence 35555553321 0112233333322222322 23344556667777777777764 233
Q ss_pred EecCCC--CCeEEEEEecCCCcc-hHHHHHHHhhcCceec
Q psy10669 243 VVTGGT--DVHLILIDLRKNKLT-GSKVELVLEEIAIACN 279 (337)
Q Consensus 243 v~~~~t--~~h~v~V~~~~~~~~-~~~~~~~L~~~gI~v~ 279 (337)
+..... ...++.++++ +.. ...+.+.|...||.++
T Consensus 368 ~~~~~~~g~g~~~~~~l~--~~~~~~~~~~~L~~~gi~v~ 405 (464)
T 1ibj_A 368 LHFSQAKGAGSVFSFITG--SVALSKHLVETTKYFSIAVS 405 (464)
T ss_dssp HHTTTCSCCCSEEEEECS--CHHHHHHHHHHCSSSEECSC
T ss_pred HHhccCCCCceEEEEEEC--CHHHHHHHHHhcCcceEeec
Confidence 322111 2457777773 211 2234444554576554
No 219
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.42 E-value=1.7e-05 Score=76.45 Aligned_cols=153 Identities=12% Similarity=-0.032 Sum_probs=88.0
Q ss_pred ccEEEEcCc-c--cccccChH---HHHHHh-hhcCCeEEEeccccccccc----------------------eeeeeccC
Q psy10669 124 FDFLSSGTT-C--YSRCLDYA---RFRQIC-DETDSIMFADMSHISGLIA----------------------GVKGVTKT 174 (337)
Q Consensus 124 pklII~~~S-~--~~~~~d~~---~l~eia-~~~ga~l~vD~AH~~Gli~----------------------g~~~T~~~ 174 (337)
+++|++.++ . .+...|.+ +|.++| +++|+++++|++|....+. .+.+|..|
T Consensus 181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 260 (427)
T 3ppl_A 181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK 260 (427)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence 688887642 2 35777777 666788 9999999999999752211 12333322
Q ss_pred -------Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH--HhchhhHHHHHHHHHHHHHHHHHHHh----C
Q psy10669 175 -------GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ--AQSDEFKSYQAQVKANASHLSDEMIK----R 239 (337)
Q Consensus 175 -------Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e--~~~~~~~~y~~~v~~na~~l~~~L~~----~ 239 (337)
.|+++. ++.+.+......... +++....++++.++.. ......++.++.+.++.+.+.+.|.+ .
T Consensus 261 ~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~ 339 (427)
T 3ppl_A 261 ITLAGAGVSFFLTSAENRKWYTGHAGIRGI-GPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEY 339 (427)
T ss_dssp TSCTTSSCEEEECCHHHHHHHHHHHHHHCS-CCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ccCcCccEEEEEcCHHHHHHHHHHhhcccC-CCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 255554 455555433211112 3344444444444332 11122344455555566666666554 2
Q ss_pred -CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 240 -GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 240 -G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
++.+.. ......+++++... +..++.+.|.+.||.+.+
T Consensus 340 ~~~~~~~-p~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~ 378 (427)
T 3ppl_A 340 GVAQWTV-PAGGYFISLDVVPG--TASRVAELAKEAGIALTG 378 (427)
T ss_dssp TCCEECC-CSBSSCEEEECSTT--CHHHHHHHHHHTTEECCC
T ss_pred CceEEeC-CCccEEEEEECCcc--hHHHHHHHHHHCCCEEec
Confidence 566543 23466677888653 577888889989999986
No 220
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.41 E-value=7.1e-06 Score=82.39 Aligned_cols=163 Identities=13% Similarity=0.010 Sum_probs=90.6
Q ss_pred ccEEEEc-Ccc-cccccChH---HHHHHhh-hcCCeEEEeccccccccc------------eeeeec-c----CC---ch
Q psy10669 124 FDFLSSG-TTC-YSRCLDYA---RFRQICD-ETDSIMFADMSHISGLIA------------GVKGVT-K----TG---EK 177 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~---~l~eia~-~~ga~l~vD~AH~~Gli~------------g~~~T~-~----~G---g~ 177 (337)
+++|++. +++ .+...+.+ +|.++|+ ++|+++++|++|.-.... .+++|. | .| |+
T Consensus 245 ~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 324 (533)
T 3f6t_A 245 IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGV 324 (533)
T ss_dssp EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEE
T ss_pred CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEE
Confidence 5777764 433 34666666 5556777 689999999999732211 123333 2 24 66
Q ss_pred hhh--h-HHHHHh-----------------------------------hccCCCCCCCCcHHHHHHHHH-HHHHHh----
Q psy10669 178 ILY--D-YEEKIN-----------------------------------NAVFPSLQGGPHNHAIGAIAT-AMLQAQ---- 214 (337)
Q Consensus 178 i~~--~-l~~~i~-----------------------------------~~~~p~~~g~~~~~~iaala~-a~~e~~---- 214 (337)
++. + +.+++- ..+.....++++.+..++++. ++..+.
T Consensus 325 l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g 404 (533)
T 3f6t_A 325 IALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTN 404 (533)
T ss_dssp EEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBG
T ss_pred EEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhcc
Confidence 654 2 222111 112333455666666666432 222221
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-----C----------cch-HHHHHHHhhc
Q psy10669 215 ----SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-----K----------LTG-SKVELVLEEI 274 (337)
Q Consensus 215 ----~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-----~----------~~~-~~~~~~L~~~ 274 (337)
....++.++.+.++.++|.+.|. .|+++... .....+++++... + .+. ..+.+.|++.
T Consensus 405 ~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~-~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~ 482 (533)
T 3f6t_A 405 GGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDT-NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKN 482 (533)
T ss_dssp GGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTT-BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCC-CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhC
Confidence 23345667788888889999887 67665432 2223456666530 1 123 4445666788
Q ss_pred CceeccCc-------ccchhh
Q psy10669 275 AIACNKNT-------GISLAA 288 (337)
Q Consensus 275 gI~v~~~~-------girig~ 288 (337)
||.+.+-. .|||+.
T Consensus 483 GV~v~pg~~f~~~~~~iRls~ 503 (533)
T 3f6t_A 483 GVVLVDGVGFGAKPGELRVSQ 503 (533)
T ss_dssp TSSSCTTEEECSSTTEEEEES
T ss_pred CEEEeCCcccCCCCCEEEEEE
Confidence 99998633 577764
No 221
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.40 E-value=2.7e-06 Score=83.88 Aligned_cols=118 Identities=15% Similarity=0.178 Sum_probs=78.2
Q ss_pred ccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccc--c----------c----eeeeecc------CCchhh
Q psy10669 124 FDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGL--I----------A----GVKGVTK------TGEKIL 179 (337)
Q Consensus 124 pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i----------~----g~~~T~~------~Gg~i~ 179 (337)
+-+||++++.|+ ..-|+++|.+||+++|++|+||+||++-+ + . .++++|| .|++++
T Consensus 199 ~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~ 278 (450)
T 3bc8_A 199 ILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIA 278 (450)
T ss_dssp EEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEE
T ss_pred EEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEE
Confidence 346677788887 78999999999999999999999999621 1 1 2456664 345554
Q ss_pred h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEec
Q psy10669 180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVT 245 (337)
Q Consensus 180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~ 245 (337)
. ++.+.+.. .+|+.+++. |. ..+...+...-...|.+..++.++++++|++.|.+ .|+.+.+
T Consensus 279 ~rd~~~~~~~~~-~~~g~~s~S--ps-L~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~ 347 (450)
T 3bc8_A 279 GFNEPFIQDISK-MYPGRASAS--PS-LDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ 347 (450)
T ss_dssp ESCHHHHHHHHH-HSCSCBCSH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC
T ss_pred ecCHHHHHHHHH-HhhcCCccc--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC
Confidence 3 34445544 366655432 22 33334444433345566666679999999999976 3888875
No 222
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=98.33 E-value=4.7e-06 Score=81.57 Aligned_cols=158 Identities=11% Similarity=0.054 Sum_probs=97.1
Q ss_pred ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec----cCCchhhh
Q psy10669 124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT----KTGEKILY 180 (337)
Q Consensus 124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~----~~Gg~i~~ 180 (337)
+++|++.+ .++ ...+ +++|+++|+++|++|++|++|+ .|-.+ ++ ..|. +-|+++..
T Consensus 232 ~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~iG~~~~~ 310 (449)
T 2cjg_A 232 IACFVAEP-IQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAG 310 (449)
T ss_dssp EEEEEECS-EETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGSSEEEEEC
T ss_pred eEEEEEeC-cCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEEecCcccEEEEEEC
Confidence 36777764 433 3344 8889999999999999999998 43322 11 1111 23554443
Q ss_pred -hHHHHHhhc----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----C-CEEecCCCC
Q psy10669 181 -DYEEKINNA----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----G-YHVVTGGTD 249 (337)
Q Consensus 181 -~l~~~i~~~----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G-~~v~~~~t~ 249 (337)
++.+.+.+. ..-+.+.+.++...++..+++..+.+ +++.+++.++.++|.+.|.+. + +..+. ..
T Consensus 311 ~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~--~~ 385 (449)
T 2cjg_A 311 RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDPR--GR 385 (449)
T ss_dssp GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEE--EE
T ss_pred HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEe--ec
Confidence 454432211 11112234567777777777776643 356788899999999999863 2 43332 34
Q ss_pred CeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669 250 VHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAA 288 (337)
Q Consensus 250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~ 288 (337)
..++.+++.... +..++.+.|.+.||.+.+.. .|||..
T Consensus 386 g~~~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~g~~~iRi~~ 425 (449)
T 2cjg_A 386 GLMCAFSLPTTA-DRDELIRQLWQRAVIVLPAGADTVRFRP 425 (449)
T ss_dssp TTEEEEECSSHH-HHHHHHHHHHHTTEECEEETTTEEEECC
T ss_pred cEEEEEEECChH-HHHHHHHHHHHCCeEEecCCCCEEEEEC
Confidence 557777776422 35567777777899998642 577753
No 223
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.32 E-value=2e-05 Score=76.01 Aligned_cols=257 Identities=16% Similarity=0.045 Sum_probs=135.6
Q ss_pred hhhhhhhcHHHHHHHHHHHhhcccceeeeccCCC-----CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669 8 HGTLAQTDPELYSLIKKEKHRQINGIELIASENF-----TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ 82 (337)
Q Consensus 8 ~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~-----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~ 82 (337)
.+.|...-..++....+-.. +...|+|...++- .+|.+++++...+.... +.... .|.-..-..++ +
T Consensus 11 ~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~-~Y~~~~G~~~l----r 82 (422)
T 3d6k_A 11 AARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKD--GVDCR-NYGGLLGIADI----R 82 (422)
T ss_dssp -------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTT--CCBTT-SSCCSSCCHHH----H
T ss_pred HHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhcc--chhhh-CCCCCCCCHHH----H
Confidence 34455556666666554333 4457888888773 24466666543211000 00001 12211112333 3
Q ss_pred HHHHhhcCCCCCCCcceeecCCCc-hhH--HHHHHhhC-C--------------c-------------------------
Q psy10669 83 QRSLKAFNLDPEQWGCNVQPYSGS-PAN--FAVCEKAL-P--------------T------------------------- 119 (337)
Q Consensus 83 ~~~a~lfg~~~~~~~~~v~~~Sgt-~AN--~~v~~aLl-~--------------~------------------------- 119 (337)
+.++++++.+. .+|.+++|+ +++ ..++.++. + .
T Consensus 83 ~~ia~~~~~~~----~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v 158 (422)
T 3d6k_A 83 ELWAEALGLPA----DLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINV 158 (422)
T ss_dssp HHHHHHHTCCG----GGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhCCCh----hHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEec
Confidence 57788889875 368888885 454 23334432 1 1
Q ss_pred ----------cc----c--cccEEEEcC--cc-cccccChH---HHHHHhh-hcCCeEEEeccccc-cccc---------
Q psy10669 120 ----------NN----A--RFDFLSSGT--TC-YSRCLDYA---RFRQICD-ETDSIMFADMSHIS-GLIA--------- 166 (337)
Q Consensus 120 ----------~~----a--~pklII~~~--S~-~~~~~d~~---~l~eia~-~~ga~l~vD~AH~~-Gli~--------- 166 (337)
.+ . ++|+|++.. .+ -+...+.+ +|.++|+ ++|+++++|++|.. ++..
T Consensus 159 ~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 238 (422)
T 3d6k_A 159 PMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVI 238 (422)
T ss_dssp EEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChh
Confidence 01 1 257777432 22 35677777 5667777 89999999999973 2211
Q ss_pred ------------eeeeeccC-------Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHH
Q psy10669 167 ------------GVKGVTKT-------GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQA 223 (337)
Q Consensus 167 ------------g~~~T~~~-------Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~ 223 (337)
.+.+|..| .|+++. ++.+.+.....+. ..+++.+..++...++... .....++.++
T Consensus 239 ~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 317 (422)
T 3d6k_A 239 EFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVR-GIGPNKLNQLAHAQFFGDVAGLKAHMLKHAA 317 (422)
T ss_dssp HHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHH-CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred hHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 11233322 255554 4656555432222 2245556665555554321 0112344455
Q ss_pred HHHHHHHHHHHHHHh----CC-CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 224 QVKANASHLSDEMIK----RG-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 224 ~v~~na~~l~~~L~~----~G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
.+.++.+++.+.|.+ .| +.+.. ...+..+++++... +..++.+.|.+.||.+.+
T Consensus 318 ~~~~~~~~l~~~L~~~l~~~~~~~~~~-p~~g~~~~~~~~~~--~~~~~~~~l~~~gV~v~~ 376 (422)
T 3d6k_A 318 SLAPKFERVLEILDSRLSEYGVAKWTS-PTGGYFISVDVVPG--TASRVVELAKEAGIALTG 376 (422)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEECC-CSBSSCEEEEESTT--CHHHHHHHHHHTTEECCC
T ss_pred HHHHHHHHHHHHHHHhcCcCCceEEeC-CCcceEEEEECCCC--CHHHHHHHHHHCCeEEEc
Confidence 666677777777765 33 56543 23455678888643 567788889899999986
No 224
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.28 E-value=3.7e-05 Score=73.47 Aligned_cols=142 Identities=11% Similarity=0.070 Sum_probs=86.5
Q ss_pred ChHHHHHHhhhcCCeEEEeccccc-ccc-------c-----------eeeeeccC-----C---chhh----h-h----H
Q psy10669 139 DYARFRQICDETDSIMFADMSHIS-GLI-------A-----------GVKGVTKT-----G---EKIL----Y-D----Y 182 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~-Gli-------~-----------g~~~T~~~-----G---g~i~----~-~----l 182 (337)
++++|.++|+++|+++++|++|.. +.- . .+.+|..| | |+++ . + +
T Consensus 204 ~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~ 283 (412)
T 1ajs_A 204 QWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRV 283 (412)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHH
Confidence 345677899999999999999752 211 1 12333322 3 4443 2 2 3
Q ss_pred HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEE
Q psy10669 183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLI 253 (337)
Q Consensus 183 ~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v 253 (337)
.+.+..... ...++++++..+++..++.... ....++.++++.++.++|.+.|.+.| +++... ..+..+
T Consensus 284 ~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~ 361 (412)
T 1ajs_A 284 LSQMQKIVR-VTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITD-QIGMFS 361 (412)
T ss_dssp HHHHHHHHH-TTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHH-CCSSEE
T ss_pred HHHHHHHHh-cccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcC-CCceEE
Confidence 333443211 2234456666776666665431 12446778889999999999999976 665542 122233
Q ss_pred EEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 254 LIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
++.+ +...+...|++.||.+.+ ++||+..
T Consensus 362 ~~~~-----~~~~~~~~l~~~gv~v~~--~~Ris~~ 390 (412)
T 1ajs_A 362 FTGL-----NPKQVEYLINQKHIYLLP--SGRINMC 390 (412)
T ss_dssp ECCC-----CHHHHHHHHHTTCEECCT--TSEEEGG
T ss_pred EeCC-----CHHHHHHHHHhCCEEecC--CcEEEee
Confidence 3332 356677778889999987 7898755
No 225
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=98.24 E-value=0.00016 Score=70.54 Aligned_cols=147 Identities=16% Similarity=0.075 Sum_probs=83.5
Q ss_pred ccccChHH---HHHHhhhcCCeEEEeccccccccc-------------------eeeeec-c----CC---chh---h--
Q psy10669 135 SRCLDYAR---FRQICDETDSIMFADMSHISGLIA-------------------GVKGVT-K----TG---EKI---L-- 179 (337)
Q Consensus 135 ~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-------------------g~~~T~-~----~G---g~i---~-- 179 (337)
++..+.++ |.++|+++|+++++|++|.....+ .++.|. | .| |++ .
T Consensus 216 G~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~ 295 (448)
T 3meb_A 216 GIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAG 295 (448)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCC
T ss_pred CcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeecc
Confidence 46666555 778899999999999998732221 113333 2 23 553 4
Q ss_pred ------h------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669 180 ------Y------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRGYH 242 (337)
Q Consensus 180 ------~------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G~~ 242 (337)
. ++.+.+.....+ ..++++.+..++++.++..-. ..+.++.++++.++.++|.+.|.+.|+.
T Consensus 296 ~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 374 (448)
T 3meb_A 296 VEGSVEKNKALSAAMVSGMTLQIRK-TWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTP 374 (448)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccccCCHHHHHHHHHHHHHHHhc-ccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3 233344433232 233455555555555443210 1234677888899999999999987532
Q ss_pred ---------EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 243 ---------VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 243 ---------v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
.... ...-..++. ++...+...|+++||.+.+-.| ||+..
T Consensus 375 ~~~~~~~~~~~~~-~~g~~~~~~-----~~~~~~~~ll~~~gV~v~~G~g-Ris~a 423 (448)
T 3meb_A 375 GPGSKGTWDHILT-AIGMFTFTG-----LTPEHVDYLKEKWSIYLVKAGG-RMSMC 423 (448)
T ss_dssp CSTTTCCCTHHHH-CCSSEEECC-----CCHHHHHHHHHHHCEEECSGGG-EEEGG
T ss_pred CcCcccccceeCC-CceEEEecC-----CCHHHHHHHHHhCCEEEeCCCc-EEEEe
Confidence 2221 111222322 2456666777889999987333 77653
No 226
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=98.11 E-value=1.8e-05 Score=76.42 Aligned_cols=158 Identities=13% Similarity=0.117 Sum_probs=95.6
Q ss_pred cEEEEcCccc--ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc---CC---chhh
Q psy10669 125 DFLSSGTTCY--SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK---TG---EKIL 179 (337)
Q Consensus 125 klII~~~S~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~---~G---g~i~ 179 (337)
++|++.+... +...+ +++|.++|+++|++|++|++|+ .|-.+ + +.+..| .| |+++
T Consensus 205 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G~~ig~~~ 284 (433)
T 1zod_A 205 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIV 284 (433)
T ss_dssp EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTSSCEEEE
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCCCCeeEEE
Confidence 5777765322 33344 7889999999999999999998 54332 1 111112 12 4554
Q ss_pred h--hHHHHHhhcc-CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCCCe
Q psy10669 180 Y--DYEEKINNAV-FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTDVH 251 (337)
Q Consensus 180 ~--~l~~~i~~~~-~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~~h 251 (337)
. ++.+.+.+.- +-+..-+.++...++..+++..+.+ +++.+++.++.++|.+.|.+. + +..+. ....
T Consensus 285 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~--~~g~ 359 (433)
T 1zod_A 285 TSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLMERFDCIGDVR--GRGL 359 (433)
T ss_dssp ECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EETT
T ss_pred EhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--EEEE
Confidence 4 5666665521 1111223466777777777766543 246788888899999888763 2 22222 2345
Q ss_pred EEEEEecCC-------CcchHHHHHHHhhcCceeccCc------ccchh
Q psy10669 252 LILIDLRKN-------KLTGSKVELVLEEIAIACNKNT------GISLA 287 (337)
Q Consensus 252 ~v~V~~~~~-------~~~~~~~~~~L~~~gI~v~~~~------girig 287 (337)
++++++... .....++.+.|.+.||.+.+.. .|||.
T Consensus 360 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~ 408 (433)
T 1zod_A 360 LLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIA 408 (433)
T ss_dssp EEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEEC
T ss_pred EEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEE
Confidence 667776531 1235667777778899987632 46664
No 227
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=97.36 E-value=4.3e-07 Score=90.09 Aligned_cols=217 Identities=11% Similarity=0.028 Sum_probs=121.3
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc-CCCCCCCcceeecCCCchhHHHHHHhhC---C
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF-NLDPEQWGCNVQPYSGSPANFAVCEKAL---P 118 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf-g~~~~~~~~~v~~~Sgt~AN~~v~~aLl---~ 118 (337)
+|.|.+|+...+.. |. ..++ .+....+++ +++++++ +.+. .+.++||+.||.+++.... +
T Consensus 118 ~p~V~~Av~~q~~~----~~-~~~~--~~~~~~~La----e~L~~~~p~~~~-----v~~~nSGseA~~~Aik~ar~~tg 181 (465)
T 2yky_A 118 HPVIRAAVERALAV----GL-NLST--QTENEALFA----EAVCDRFPSIDL-----VRFTNSGTEANLMALATATAITG 181 (465)
Confidence 89999998765433 11 1111 122223344 5778888 4443 3556788999988766531 1
Q ss_pred -----------------------------c------------c--cc----cccEEEEcCcccc---cccC----hHHHH
Q psy10669 119 -----------------------------T------------N--NA----RFDFLSSGTTCYS---RCLD----YARFR 144 (337)
Q Consensus 119 -----------------------------~------------~--~a----~pklII~~~S~~~---~~~d----~~~l~ 144 (337)
. + +. ++++||+.+ +++ ...+ +++|+
T Consensus 182 r~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~ep-v~~~~G~~~~~~~~l~~l~ 260 (465)
T 2yky_A 182 RKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCAAILVEP-MLGAGGCVPAERAFLDLLR 260 (465)
Confidence 0 0 01 146777753 433 2333 78899
Q ss_pred HHhhhcCCeEEEeccccccccc--------ee---eeec-c--CC----chhhh--hHHHHHhh---c-cCCCCCCCCcH
Q psy10669 145 QICDETDSIMFADMSHISGLIA--------GV---KGVT-K--TG----EKILY--DYEEKINN---A-VFPSLQGGPHN 200 (337)
Q Consensus 145 eia~~~ga~l~vD~AH~~Gli~--------g~---~~T~-~--~G----g~i~~--~l~~~i~~---~-~~p~~~g~~~~ 200 (337)
++|+++|++||+|++|+ +-.+ ++ ..|. | -| |++++ ++.+.+.+ . ++-+.+-+.++
T Consensus 261 ~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~np 339 (465)
T 2yky_A 261 AEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNI 339 (465)
Confidence 99999999999999999 5332 11 1122 2 12 33333 46565554 1 11111223455
Q ss_pred HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCCc------------chH
Q psy10669 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNKL------------TGS 265 (337)
Q Consensus 201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~~------------~~~ 265 (337)
...++..+++..+.+ +.+.+++.++.++|+++|.+. .+.+.. -.....++.+.+..... ...
T Consensus 340 la~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~ 416 (465)
T 2yky_A 340 LTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKE 416 (465)
Confidence 566666566666533 357889999999999998874 233221 11234566665543110 133
Q ss_pred HHHHHHhhcCceecc
Q psy10669 266 KVELVLEEIAIACNK 280 (337)
Q Consensus 266 ~~~~~L~~~gI~v~~ 280 (337)
.+...|.+.||.+.+
T Consensus 417 ~~~~~ll~~GV~v~p 431 (465)
T 2yky_A 417 LFFFHMLRKGIYLAP 431 (465)
Confidence 455556667998875
No 228
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.08 E-value=2.4e-05 Score=77.30 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=93.4
Q ss_pred cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee-----eeec-cC---Cchhh
Q psy10669 125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV-----KGVT-KT---GEKIL 179 (337)
Q Consensus 125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~-----~~T~-~~---Gg~i~ 179 (337)
++||+.+ +++ ...+ +++|+++|+++|++|++|++|+ .|-.+ ++ ..|. |. ||+++
T Consensus 260 ~~vive~-v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG~~~ 338 (472)
T 1ohv_A 260 AGIIVEP-IQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFH 338 (472)
T ss_dssp EEEEECS-SBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEEEEE
T ss_pred EEEEEcC-CcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCCccC
Confidence 5777763 443 3445 7889999999999999999997 33322 21 1122 32 46654
Q ss_pred hhHHHHHhhccCCCC-CC--CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CC----EEecCCCCC
Q psy10669 180 YDYEEKINNAVFPSL-QG--GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GY----HVVTGGTDV 250 (337)
Q Consensus 180 ~~l~~~i~~~~~p~~-~g--~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~----~v~~~~t~~ 250 (337)
. +.+.. ..+.. .+ +.++..+++..+++..+.+ +++.+++.++.++|.+.|.+. ++ .-+. ...
T Consensus 339 ~---~~~~~-~~~~~~~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~--~~g 409 (472)
T 1ohv_A 339 K---EEFRP-NAPYRIFNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVR--GRG 409 (472)
T ss_dssp C---GGGSC-SSSSSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEE--EET
T ss_pred c---hhhcc-cccccccCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeec--CCc
Confidence 3 11221 11222 22 3467777777777766643 246788899999999998773 22 2122 235
Q ss_pred eEEEEEecCCCcchHHHHHHHhhcCceeccC--cccchhhh
Q psy10669 251 HLILIDLRKNKLTGSKVELVLEEIAIACNKN--TGISLAAE 289 (337)
Q Consensus 251 h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~--~girig~~ 289 (337)
.++.+++.... ....+.+.|.+.||.+.+. ..|||..+
T Consensus 410 ~~~~~~~~~~~-~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~ 449 (472)
T 1ohv_A 410 TFCSFDTPDES-IRNKLISIARNKGVMLGGCGDKSIRFRPT 449 (472)
T ss_dssp TEEEEECSSHH-HHHHHHHHHHHTTEECEEETTTEEEECCC
T ss_pred eEEEEEeCChh-HHHHHHHHHHHCCeEEecCCCCEEEEECC
Confidence 56667665321 3456667777789998764 26777544
No 229
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=97.87 E-value=0.00015 Score=71.56 Aligned_cols=147 Identities=14% Similarity=0.072 Sum_probs=79.2
Q ss_pred ChHHHHHHhhhcCCeEEEeccccc-cccc--------ee----eeecc--CCc-----hhhh-hHHHHHhhccCCCCCCC
Q psy10669 139 DYARFRQICDETDSIMFADMSHIS-GLIA--------GV----KGVTK--TGE-----KILY-DYEEKINNAVFPSLQGG 197 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g~----~~T~~--~Gg-----~i~~-~l~~~i~~~~~p~~~g~ 197 (337)
=++.|+++|+++|++||+|+-|+- |=.+ |+ +..+| .|| ++.. ++.+.+.+....++++
T Consensus 248 fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~P~~av~~~~~i~~~~~~~~~~~Tf~- 326 (456)
T 4atq_A 248 FLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGLPLSAITGRADLLDAVHPGGLGGTYG- 326 (456)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCEEEEEEHHHHTTSCTTSSCCSSS-
T ss_pred hhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcCCceeeEecHHHHhcccccCCCCCCC-
Confidence 366799999999999999999864 3333 11 11112 123 2222 4544444443334443
Q ss_pred CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-------CCEEecC-CCCCeEEEEEecCCC---cc---
Q psy10669 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-------GYHVVTG-GTDVHLILIDLRKNK---LT--- 263 (337)
Q Consensus 198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-------G~~v~~~-~t~~h~v~V~~~~~~---~~--- 263 (337)
.|+...|+..+.+..+.++ ...+++.+..++|.++|++. +.++++. -...-+.-|++.... -+
T Consensus 327 gnpla~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~ 403 (456)
T 4atq_A 327 GNPVACAAALAAIDTMEQH---DLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAEL 403 (456)
T ss_dssp SCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHH
T ss_pred CChHHHHhhHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHH
Confidence 4666666666667666432 45667777777777777652 1122210 001113445553221 11
Q ss_pred hHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669 264 GSKVELVLEEIAIACNKNT----GISLAAE 289 (337)
Q Consensus 264 ~~~~~~~L~~~gI~v~~~~----girig~~ 289 (337)
...+.+.|.+.|+.+.... -|||.-+
T Consensus 404 ~~~v~~~~~~~Gvl~~~~g~~~~~irl~Pp 433 (456)
T 4atq_A 404 TKAVAAACLKEGVIILTCGTYGNVIRLLPP 433 (456)
T ss_dssp HHHHHHHHHHTTEECEEECTTSCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEecCCCCCEEEEECC
Confidence 2345566667799886432 4777644
No 230
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=97.76 E-value=7.2e-05 Score=71.65 Aligned_cols=147 Identities=9% Similarity=0.006 Sum_probs=84.5
Q ss_pred ccEEEEc-Ccc-cccccChHHHHHHhhh-cC--CeEEEeccccccccc---------eeeeec-c----CC---chhhh-
Q psy10669 124 FDFLSSG-TTC-YSRCLDYARFRQICDE-TD--SIMFADMSHISGLIA---------GVKGVT-K----TG---EKILY- 180 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~~l~eia~~-~g--a~l~vD~AH~~Gli~---------g~~~T~-~----~G---g~i~~- 180 (337)
+|+|++. +++ .+...+ +||++ ++ +++++|++|..+-.. .+.+|. | .| |+++.
T Consensus 158 ~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 232 (391)
T 3bwn_A 158 PYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALVK 232 (391)
T ss_dssp CEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEEC
T ss_pred CEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEechhhcCCCccceEEEEec
Confidence 6777554 433 123333 45555 66 999999999754211 123333 2 23 66653
Q ss_pred --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh---------chhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-C
Q psy10669 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ---------SDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-G 247 (337)
Q Consensus 181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~---------~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~ 247 (337)
++.+.+..... ....+++.+...+++.++..-. +...++.++++.++.++|.+.|.+. |+++... +
T Consensus 233 ~~~l~~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~ 311 (391)
T 3bwn_A 233 DKEVAKKMVEYII-VNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPE 311 (391)
T ss_dssp CHHHHHHHHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCC
T ss_pred CHHHHHHHHHHhc-ccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence 46555544321 1123556666666666665532 2345677888899999999999986 6665431 1
Q ss_pred CC-----------CeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669 248 TD-----------VHLILIDLRKNKLTGSKVELVLEEIAIACNK 280 (337)
Q Consensus 248 t~-----------~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~ 280 (337)
+. .-.+++++.. ...+...|++.||.+.+
T Consensus 312 ~~~~f~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~gV~v~p 351 (391)
T 3bwn_A 312 AFCNYFGKSLESYPAFAWLGTKE----ETDLVSELRRHKVMSRA 351 (391)
T ss_dssp EEETTTTEEECCCCSEEEEEESS----SCCHHHHHHHTTEECEE
T ss_pred cccccccccCCCcceEEEecCCc----HHHHHHHHHHCCEEEcc
Confidence 11 1146777753 23566788889999987
No 231
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.64 E-value=0.0024 Score=63.26 Aligned_cols=143 Identities=12% Similarity=0.116 Sum_probs=78.9
Q ss_pred ChHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc------hhhh-hHHHHHhhc------c
Q psy10669 139 DYARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE------KILY-DYEEKINNA------V 190 (337)
Q Consensus 139 d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg------~i~~-~l~~~i~~~------~ 190 (337)
=++.|++||+++|++||+|+-++ .|=.+ | ++...| .|| ++.. ++.+.+... .
T Consensus 258 fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~ 337 (473)
T 4e3q_A 258 YFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEF 337 (473)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhcccccccccc
Confidence 36679999999999999999986 23222 1 122223 234 3333 454444321 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCE-EecCCCCCeEEEEEecCCC----
Q psy10669 191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYH-VVTGGTDVHLILIDLRKNK---- 261 (337)
Q Consensus 191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~-v~~~~t~~h~v~V~~~~~~---- 261 (337)
+.+.+-+.|+.+.|+..+.+..+.+ +...+++.+..++|.++|++. ++. |-+ ..-+.-|.+....
T Consensus 338 ~hg~T~~Gnpla~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG---~Gl~~gielv~~~~~~~ 411 (473)
T 4e3q_A 338 PHGFTASGHPVGCAIALKAIDVVMN---EGLAENVRRLAPRFEERLKHIAERPNIGEYRG---IGFMWALEAVKDKASKT 411 (473)
T ss_dssp CCCCTTTTCHHHHHHHHHHHHHHHH---SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE---ETTEEEEEECSBTTTTB
T ss_pred ccCCCCCCCcchhhhhhhhhhhhcc---ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEee---cceEEEEEEecCccccc
Confidence 2222224566666666666666643 245677888888888888762 111 111 1113334432111
Q ss_pred ------cchHHHHHHHhhcCceeccCc-ccchh
Q psy10669 262 ------LTGSKVELVLEEIAIACNKNT-GISLA 287 (337)
Q Consensus 262 ------~~~~~~~~~L~~~gI~v~~~~-girig 287 (337)
..+..+.+.+.+.|+.+.+.. .|||.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~Gll~~~~g~~i~l~ 444 (473)
T 4e3q_A 412 PFDGNLSVSERIANTCTDLGLICRPLGQSVVLC 444 (473)
T ss_dssp CCCGGGCHHHHHHHHHHHTTEECEEETTEEEEC
T ss_pred cccccHHHHHHHHHHHHHCCcEEEecCCEEEEe
Confidence 113456677777899987543 56654
No 232
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=97.01 E-value=0.021 Score=57.35 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=26.9
Q ss_pred ccEEEEc-Ccc-cccccChHH---HHHHh--hhcCCeEEEeccccc
Q psy10669 124 FDFLSSG-TTC-YSRCLDYAR---FRQIC--DETDSIMFADMSHIS 162 (337)
Q Consensus 124 pklII~~-~S~-~~~~~d~~~---l~eia--~~~ga~l~vD~AH~~ 162 (337)
+|+|++. +++ .+...+.++ |.++| +++|+++++|++|.-
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~ 291 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGT 291 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGG
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchh
Confidence 5666654 322 245666554 56777 789999999999974
No 233
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=96.98 E-value=0.0039 Score=60.41 Aligned_cols=229 Identities=8% Similarity=-0.088 Sum_probs=118.3
Q ss_pred cceeeeccCCCC--CHHHHHHHhhhhhhc--cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC------CCCCCCccee
Q psy10669 31 NGIELIASENFT--SLAVLECLGSCLQNK--YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN------LDPEQWGCNV 100 (337)
Q Consensus 31 ~~i~l~asen~~--~p~V~~a~~~~l~~~--y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg------~~~~~~~~~v 100 (337)
..|+|-..++-. ++.+++++...+... ...+|+... .|.....+++ +.++++++ .+. -+|
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~--~G~~~~~~lr----~aia~~~~~~~~~~~~~----~~i 126 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNP--VSNFISFELE----KTIKELHEVVGNAAAKD----RYI 126 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSS--CCTTCCHHHH----HHHHHHHHHHTCBCCTT----CEE
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCC--CCccchHHHH----HHHHHHHHHhCCcCCCC----CEE
Confidence 346666666654 345666665443211 001122211 1322235555 34455554 333 257
Q ss_pred ecCCC-chhHHHHHHhh--------CCc---------------------------------cc--c---cccEEEEc-Cc
Q psy10669 101 QPYSG-SPANFAVCEKA--------LPT---------------------------------NN--A---RFDFLSSG-TT 132 (337)
Q Consensus 101 ~~~Sg-t~AN~~v~~aL--------l~~---------------------------------~~--a---~pklII~~-~S 132 (337)
.+++| ++|+..++.+| +++ .+ + ++|+|++. ++
T Consensus 127 v~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~ 206 (427)
T 2hox_A 127 VFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPN 206 (427)
T ss_dssp EEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEEEEGGGGTTCSCGGGEEEEEESSC
T ss_pred EEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeecCCHHHHHHhhcCCceEEEEcCCC
Confidence 77777 67888888998 664 11 1 26776664 43
Q ss_pred c-cccccChHHHHHHhhhcCCeEEEeccccccc---c---c---eeeeec-c-------CCchhhh---hHHHHHhhccC
Q psy10669 133 C-YSRCLDYARFRQICDETDSIMFADMSHISGL---I---A---GVKGVT-K-------TGEKILY---DYEEKINNAVF 191 (337)
Q Consensus 133 ~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl---i---~---g~~~T~-~-------~Gg~i~~---~l~~~i~~~~~ 191 (337)
+ .+...+ + +++ +...++|+++.-.. . . .+.+|. | +.|+++. ++.+.+.....
T Consensus 207 NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~ 279 (427)
T 2hox_A 207 NPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMT 279 (427)
T ss_dssp TTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHH
T ss_pred CCcccccH-H----HHc--CCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHH
Confidence 3 234444 2 333 45678888653211 1 1 123332 1 2366654 46665554322
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHh----------chhhHHHHHHHHHHHHHHHHHHHhC-CCEE--ec-C----------C
Q psy10669 192 PSLQGGPHNHAIGAIATAMLQAQ----------SDEFKSYQAQVKANASHLSDEMIKR-GYHV--VT-G----------G 247 (337)
Q Consensus 192 p~~~g~~~~~~iaala~a~~e~~----------~~~~~~y~~~v~~na~~l~~~L~~~-G~~v--~~-~----------~ 247 (337)
+... +++.....+++.++.... +...++.++++.++.++|.+.|.+. |+.+ +. . .
T Consensus 280 ~~~~-~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p 358 (427)
T 2hox_A 280 KNTE-GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRP 358 (427)
T ss_dssp HHTS-SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEEC
T ss_pred hcCC-CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCC
Confidence 2223 334444444444554321 1223456788889999999999886 8876 11 0 1
Q ss_pred CCCeEEEEEecCCCcchHH-HHHHHhhcCceecc
Q psy10669 248 TDVHLILIDLRKNKLTGSK-VELVLEEIAIACNK 280 (337)
Q Consensus 248 t~~h~v~V~~~~~~~~~~~-~~~~L~~~gI~v~~ 280 (337)
.-...+++++.. +..+ +...|++.||.+.+
T Consensus 359 ~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~p 389 (427)
T 2hox_A 359 PSPSYAWVKCEW---EEDKDCYQTFQNGRINTQN 389 (427)
T ss_dssp CCCSEEEEEECS---GGGCSHHHHHHHTTEECEE
T ss_pred CCceEEEEECCC---cHHHHHHHHHHHCCEEEcC
Confidence 124457788764 2333 34455678999876
No 234
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=96.98 E-value=0.18 Score=48.88 Aligned_cols=66 Identities=9% Similarity=0.036 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCEE----ecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhH
Q psy10669 217 EFKSYQAQVKANASHLSDEMIKRGYHV----VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQ 291 (337)
Q Consensus 217 ~~~~y~~~v~~na~~l~~~L~~~G~~v----~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~ 291 (337)
+.+.+++++.+.-+.|.+.|.+.|..- +. .+.=+.. -.+++..++ ++|+++||++-+ +-||....+
T Consensus 329 ~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~--~q~GmF~----~~gls~e~v-~~L~e~~Vy~~~--~gRis~Agl 398 (420)
T 4h51_A 329 ELSAMAERIRTMRRTVYDELLRLQTPGSWEHVI--NQIGMFS----FLGLSKAQC-EYCQNHNIFITV--SGRANMAGL 398 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH--HCCSSEE----ECCCCHHHH-HHHHHTTEECCT--TCEEEGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeec--CCCceEE----ecCcCHHHH-HHHHhCCEEEcC--CCEEEeccC
Confidence 446777888888888999998876321 11 0000111 124555555 678889999877 458865443
No 235
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=96.73 E-value=0.16 Score=48.69 Aligned_cols=156 Identities=11% Similarity=0.040 Sum_probs=83.5
Q ss_pred ccEEEEcCc-cc--ccccChHH---HHHHhhhcCCeEEEeccccc---c-c------c----c-----eeeeec-c----
Q psy10669 124 FDFLSSGTT-CY--SRCLDYAR---FRQICDETDSIMFADMSHIS---G-L------I----A-----GVKGVT-K---- 173 (337)
Q Consensus 124 pklII~~~S-~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~---G-l------i----~-----g~~~T~-~---- 173 (337)
+++|++..+ .+ +...+.++ |.++|+++|.+++.|+++.- | . + . .++.+. |
T Consensus 174 ~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l 253 (405)
T 3k7y_A 174 GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSL 253 (405)
T ss_dssp SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCC
T ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCC
Confidence 468887643 35 46666665 45778899999999999751 1 1 0 0 122332 2
Q ss_pred ---CCchhh---h--hHHHH----HhhccCCCCCCCCcHHHHHHHHHHHHHH--h---chhhHHHHHHHHHHHHHHHHHH
Q psy10669 174 ---TGEKIL---Y--DYEEK----INNAVFPSLQGGPHNHAIGAIATAMLQA--Q---SDEFKSYQAQVKANASHLSDEM 236 (337)
Q Consensus 174 ---~Gg~i~---~--~l~~~----i~~~~~p~~~g~~~~~~iaala~a~~e~--~---~~~~~~y~~~v~~na~~l~~~L 236 (337)
+-|+++ . ++.+. +....... .++++....++.+.++.+- . ..+.+++++++.++-+.|.+.|
T Consensus 254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L 332 (405)
T 3k7y_A 254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKF-YSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKL 332 (405)
T ss_dssp TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTT-TSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEeCCHHHHHHHHHHHHHHHhcc-cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 225542 1 33332 22221111 2344444444444433320 0 1234567788889999999999
Q ss_pred H----hCC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669 237 I----KRG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE 289 (337)
Q Consensus 237 ~----~~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~ 289 (337)
. +.| +++... ..+--+++.+. ...+ ..|+++||.+.+ |-||+..
T Consensus 333 ~~~~~~~g~~~~~~~~~p-~gg~f~~~~l~-----~~~~-~~L~~~gV~v~p--~~Ris~a 384 (405)
T 3k7y_A 333 ETYQKKYNLNYDWNVYKK-QRGLFSFVPLL-----AKIA-EHLKTHHIYIIN--NGRINVS 384 (405)
T ss_dssp HHHGGGGTCCCCGGGGSS-CCSSEEECGGG-----GGGT-TTTTTTTEECCT--TSEEEGG
T ss_pred HhhhhhcCCCCCCccccC-CceEEEecCCC-----HHHH-HHHHHCCEeecC--CCeEEEe
Confidence 9 776 354431 12223444333 2333 445778999988 4477643
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=96.61 E-value=0.003 Score=66.78 Aligned_cols=163 Identities=13% Similarity=0.081 Sum_probs=85.0
Q ss_pred ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CCch----
Q psy10669 124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TGEK---- 177 (337)
Q Consensus 124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~Gg~---- 177 (337)
...||+.+-..+ +..+ +++|+++|+++|++||+|+.|+ .|-.+ |+ ..|. | .||+
T Consensus 595 iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~gG~~Plg 674 (831)
T 4a0g_A 595 VGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTGGMVPLA 674 (831)
T ss_dssp EEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGTTSSCCE
T ss_pred EEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccccCccCcE
Confidence 357777542122 3322 6789999999999999999876 44444 11 1122 2 1343
Q ss_pred -hhh--hHHHHHhhc-----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH--------HHHHHHhCC-
Q psy10669 178 -ILY--DYEEKINNA-----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH--------LSDEMIKRG- 240 (337)
Q Consensus 178 -i~~--~l~~~i~~~-----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~--------l~~~L~~~G- 240 (337)
+++ ++.+.+... .+-+.+-+.|+...|+..+++..+.++. ..+++.++.++ +.+.+.+..
T Consensus 675 av~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~---l~~~~~~~~~~l~~~l~~~l~~~l~~~~~ 751 (831)
T 4a0g_A 675 VTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPE---TNHNITSQGKTLRELWDEELVQQISSHSA 751 (831)
T ss_dssp EEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTT---TCTTBCTTSSBBCCCSCHHHHHHHHHSTT
T ss_pred EEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 333 566655432 1122233456666666666666654322 33444444343 333444432
Q ss_pred CEEecCCCCCeEEEEEecCC-------CcchHHHHHHHhhcCceeccCc-ccchhhhhH
Q psy10669 241 YHVVTGGTDVHLILIDLRKN-------KLTGSKVELVLEEIAIACNKNT-GISLAAEIQ 291 (337)
Q Consensus 241 ~~v~~~~t~~h~v~V~~~~~-------~~~~~~~~~~L~~~gI~v~~~~-girig~~~~ 291 (337)
+.-+. ....++.|.+... ...+..+.+.|.+.||.+++.. -|||..+..
T Consensus 752 v~~vr--g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g~~lrl~pp~~ 808 (831)
T 4a0g_A 752 VQRVV--VIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPC 808 (831)
T ss_dssp EEEEE--EETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCBTTEEEEECCTT
T ss_pred ceeEe--ecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEecCCEEEEECCCC
Confidence 22111 1233555555332 1134567777888899998643 677764443
No 237
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=60.31 E-value=18 Score=30.72 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=49.2
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhc-cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNK-YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE 94 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~-y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~ 94 (337)
+.-+.+.|+|++.+|...+-+.. +.+. +-.-.|...+|.+-+.++++......++.+.||.+++
T Consensus 118 ~~plvl~Pa~m~~~~~~~~N~~~-L~~~G~~ivpp~~g~~~~p~si~div~~~v~~~ld~~~i~~~ 182 (189)
T 2ejb_A 118 RVPLVLLVREAPYNEIHLENMLK-ITRMGGVVVPASPAFYHKPQSIDDMINFVVGKLLDVLRIEHN 182 (189)
T ss_dssp TCCEEEEECCSSCCHHHHHHHHH-HHHTTCEEEECCCCSTTCCCSHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCcEEEEECCCCCCHHHHHHHHH-HHHCCeEEeCCChHHhhCCCCHHHHHHHHHHHHHHhCCCCcc
Confidence 45688999999999999998875 3432 1112467778888888988888888899999999753
No 238
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=51.98 E-value=42 Score=28.67 Aligned_cols=65 Identities=20% Similarity=0.157 Sum_probs=48.1
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE 94 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~ 94 (337)
+.-+.+.|.|++.+|...+-+...-...+-.-.|...+|..-+.++++...+..++.+.||.++.
T Consensus 114 ~~plvl~Pa~m~~~~~~~~N~~~L~~~G~~ivpp~~g~~~~p~~i~~~v~~~v~r~ld~~~i~~~ 178 (197)
T 1sbz_A 114 GRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHP 178 (197)
T ss_dssp TCEEEEEECCSSBCHHHHHHHHHHHTTTCEECCCCCCCTTCCCBHHHHHHHHHHHHHGGGTCCCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCcccCCCCCHHHHHHHHHHHHHHhCCCCcc
Confidence 35688899999999999998875322222223567778887777877777777899999999763
No 239
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=46.84 E-value=6 Score=38.21 Aligned_cols=68 Identities=9% Similarity=-0.114 Sum_probs=37.2
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL 117 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl 117 (337)
+|.|.+|+...+.. +..++. .. + |+....+++....++++++++.... ..+.+.||+.||.+++..+.
T Consensus 81 ~p~v~~A~~~~~~~-~~~~~~-~~-~-~~~~~~~l~~~la~~l~~~~~~~~~---~v~f~~sGseA~~~Aik~a~ 148 (472)
T 1ohv_A 81 HPALVKLVQQPQNV-STFINR-PA-L-GILPPENFVEKLRESLLSVAPKGMS---QLITMACGSCSNENAFKTIF 148 (472)
T ss_dssp CHHHHHHHHCGGGH-HHHHCC-CC-T-TTSCBTTHHHHHHHTGGGGCCTTCC---EEEEESSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh-cccccc-cc-c-ccccHHHHHHHHHHHHHHhCCCCcC---EEEEeCCchhHHHHHHHHHH
Confidence 99999999875422 111121 11 1 2222234444333456677643321 13555777999999888763
No 240
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=46.82 E-value=49 Score=28.53 Aligned_cols=64 Identities=17% Similarity=0.131 Sum_probs=49.8
Q ss_pred ccceeeeccCCCCCHHHHHHHhhhhhhc-cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669 30 INGIELIASENFTSLAVLECLGSCLQNK-YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE 94 (337)
Q Consensus 30 ~~~i~l~asen~~~p~V~~a~~~~l~~~-y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~ 94 (337)
+.-+.+.|.|.+.+|..++-+.. +.+. +-.-.|...+|..-+.++++......|+.+.||.++.
T Consensus 131 ~~plvl~Paem~~~~~~~~Nm~~-L~~~G~~iipp~~g~ya~p~~iediv~~vv~r~ld~lgi~~~ 195 (209)
T 3zqu_A 131 RRPLVLVPREAPFSSIHLENMLK-LSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQD 195 (209)
T ss_dssp TCCEEEEECCSSCCHHHHHHHHH-HHHHTCEECCSCCCCTTCCCSHHHHHHHHHHHHHHHHTCCCS
T ss_pred CCcEEEEEcccccCHHHHHHHHH-HHHCCCEEeCCCcccccCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 35589999999999999998874 3322 2223577788988899998888877899999998863
No 241
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=42.76 E-value=23 Score=31.73 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=32.3
Q ss_pred ccEEEEc----C-cccc-cccChHHHHHHhhhcCCeEEEeccccccc
Q psy10669 124 FDFLSSG----T-TCYS-RCLDYARFRQICDETDSIMFADMSHISGL 164 (337)
Q Consensus 124 pklII~~----~-S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gl 164 (337)
++++++- . +.|+ -+.|+..+..+.+..+..+++|.+|+.|.
T Consensus 159 ~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 159 ENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 6777764 1 3565 66788888888888899999999999886
No 242
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=42.34 E-value=20 Score=32.32 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=27.9
Q ss_pred ccEEEEc-Ccccccc---cChHHHHHHhhhcCCeEEEeccccc
Q psy10669 124 FDFLSSG-TTCYSRC---LDYARFRQICDETDSIMFADMSHIS 162 (337)
Q Consensus 124 pklII~~-~S~~~~~---~d~~~l~eia~~~ga~l~vD~AH~~ 162 (337)
|+++++- .+.|+.. .|+..+..+.+. + .++||.+|+.
T Consensus 147 ~~i~L~~rG~~~~y~~~~~dl~~i~~lk~~-~-pVivD~sH~~ 187 (267)
T 2nwr_A 147 KEIYLTERGTTFGYNNLVVDFRSLPIMKQW-A-KVIYDATHSV 187 (267)
T ss_dssp SSEEEEECCEECSSSCEECCTTHHHHHTTT-S-EEEEETTGGG
T ss_pred CeEEEEECCCCCCCCccccCHHHHHHHHHc-C-CEEEcCCccc
Confidence 6777764 4556554 688888877665 7 9999999997
No 243
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=39.59 E-value=18 Score=34.42 Aligned_cols=40 Identities=20% Similarity=0.307 Sum_probs=32.1
Q ss_pred ccEEEEc--Cccccc----ccChHHHHHHhhhcCCeEEEecccccc
Q psy10669 124 FDFLSSG--TTCYSR----CLDYARFRQICDETDSIMFADMSHISG 163 (337)
Q Consensus 124 pklII~~--~S~~~~----~~d~~~l~eia~~~ga~l~vD~AH~~G 163 (337)
++++++- -|.|+. ..|+..|..+.+..+.++++|.+|+.|
T Consensus 278 ~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 278 GKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 6788884 455653 578888888888889999999999987
No 244
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=38.80 E-value=17 Score=32.96 Aligned_cols=39 Identities=10% Similarity=0.127 Sum_probs=31.2
Q ss_pred ccEEEEc-Ccccccc---cChHHHHHHhhhc-CCeEEEeccccc
Q psy10669 124 FDFLSSG-TTCYSRC---LDYARFRQICDET-DSIMFADMSHIS 162 (337)
Q Consensus 124 pklII~~-~S~~~~~---~d~~~l~eia~~~-ga~l~vD~AH~~ 162 (337)
++++++- .+.|+.. .|+..+..+.+.. +..+++|.+|+.
T Consensus 158 ~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~ 201 (280)
T 2qkf_A 158 GKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSL 201 (280)
T ss_dssp CCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHC
T ss_pred CeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCCc
Confidence 6777775 4567655 5888888888887 899999999994
No 245
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=37.16 E-value=79 Score=29.24 Aligned_cols=61 Identities=11% Similarity=0.078 Sum_probs=36.3
Q ss_pred CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHHHHHhh
Q psy10669 43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFAVCEKA 116 (337)
Q Consensus 43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~v~~aL 116 (337)
+|.|.+++...+. ++. +...++. .....+++ ++++++++.+.. .|.++ ||+.||..++.++
T Consensus 61 ~p~v~~a~~~~~~-~~~--~~~~~~~--~~~~~~l~----~~la~~~~~~~~----~v~~~~gg~ea~~~a~~~~ 122 (433)
T 1zod_A 61 HPEIVSVIGEYAG-KLD--HLFSEML--SRPVVDLA----TRLANITPPGLD----RALLLSTGAESNEAAIRMA 122 (433)
T ss_dssp CHHHHHHHHHHHH-HCC--CCCTTCC--CHHHHHHH----HHHHHHSCTTCC----EEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-hCc--ccccccC--CHHHHHHH----HHHHHhCCCCcC----EEEEeCchHHHHHHHHHHH
Confidence 8999999987654 332 2111111 12223333 477889986542 46665 5589988887754
No 246
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=36.88 E-value=21 Score=33.57 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=32.0
Q ss_pred ccEEEEc--Cccc----ccccChHHHHHHhhhcCCeEEEecccccc
Q psy10669 124 FDFLSSG--TTCY----SRCLDYARFRQICDETDSIMFADMSHISG 163 (337)
Q Consensus 124 pklII~~--~S~~----~~~~d~~~l~eia~~~ga~l~vD~AH~~G 163 (337)
+++++|. .+.| .-+.|+..|..+.+..+..+++|.+|+.|
T Consensus 242 ~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 242 TKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 7888882 2334 46678888888888889999999999988
No 247
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=36.25 E-value=53 Score=23.27 Aligned_cols=50 Identities=8% Similarity=0.032 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCC--cchHHHHHHHhhcCce
Q psy10669 226 KANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNK--LTGSKVELVLEEIAIA 277 (337)
Q Consensus 226 ~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~--~~~~~~~~~L~~~gI~ 277 (337)
.+||+.+.+.|...|++..- .+..-|. |.+++.. -.+..+...|.+.|+.
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yR--V~vGpf~s~~~A~~~~~~L~~~g~~ 72 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNR--VVIGPVKGKENADSTLNRLKMAGHT 72 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEE--EEESSCBTTTHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEE--EEECCcCCHHHHHHHHHHHHHcCCC
Confidence 46888899999998887443 1122343 4455542 1455556666666653
No 248
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=36.14 E-value=19 Score=32.87 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=31.6
Q ss_pred ccEEEEc-Ccccccc---cChHHHHHHhhhc-CCeEEEeccccccc
Q psy10669 124 FDFLSSG-TTCYSRC---LDYARFRQICDET-DSIMFADMSHISGL 164 (337)
Q Consensus 124 pklII~~-~S~~~~~---~d~~~l~eia~~~-ga~l~vD~AH~~Gl 164 (337)
++++++- .+.|+.. .|+..+..+.+.. +..+++|.+|+..+
T Consensus 161 ~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~ 206 (292)
T 1o60_A 161 DKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQC 206 (292)
T ss_dssp CCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC-
T ss_pred CeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcccc
Confidence 6777775 4556655 5889898888877 89999999999544
No 249
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=31.91 E-value=36 Score=30.96 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=31.7
Q ss_pred ccEEEEc-Ccccccc---cChHHHHHHhhhc-CCeEEEeccccccccc
Q psy10669 124 FDFLSSG-TTCYSRC---LDYARFRQICDET-DSIMFADMSHISGLIA 166 (337)
Q Consensus 124 pklII~~-~S~~~~~---~d~~~l~eia~~~-ga~l~vD~AH~~Gli~ 166 (337)
++++++. .+.|+.. .|+..|..+.+.. |..+++|.+|+...-+
T Consensus 163 ~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~ 210 (285)
T 3sz8_A 163 DRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRD 210 (285)
T ss_dssp CCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC---
T ss_pred CcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCC
Confidence 6788886 5566543 5888888888887 7999999999964444
No 250
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=29.68 E-value=34 Score=31.20 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=32.2
Q ss_pred ccEEEEc-Cccccccc---ChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 124 FDFLSSG-TTCYSRCL---DYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 124 pklII~~-~S~~~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
++++++. .+.|++.- |+..|..+.+ .+..+++|.+|+..+-+
T Consensus 166 ~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~D~sHs~q~p~ 211 (288)
T 3tml_A 166 DRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVFDATHSVQLPG 211 (288)
T ss_dssp CCEEEEECCEECSSSCEECCHHHHHHGGG-GSSCEEEEHHHHTCCCC
T ss_pred CcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEEcCCcccccCC
Confidence 5688886 56676443 8888888876 89999999999975554
No 251
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=28.72 E-value=62 Score=30.29 Aligned_cols=39 Identities=10% Similarity=-0.067 Sum_probs=24.4
Q ss_pred ccEEEEc-CcccccccChHHHHH---HhhhcCCe--EEEecccccc
Q psy10669 124 FDFLSSG-TTCYSRCLDYARFRQ---ICDETDSI--MFADMSHISG 163 (337)
Q Consensus 124 pklII~~-~S~~~~~~d~~~l~e---ia~~~ga~--l~vD~AH~~G 163 (337)
|+++++- ++. +-..+...++. +-++.|.. +|||.+|+.|
T Consensus 227 ~~~~lilRG~~-~~ny~~~di~~~~~~l~~~~lp~~VivD~SH~ns 271 (350)
T 1n8f_A 227 GDCHIILRGGK-EPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANS 271 (350)
T ss_dssp SCEEEEECCSS-SCCCSHHHHHHHHHHHHHTTCCCCEEEECSGGGT
T ss_pred CCEEEEECCCC-CCCCCHHHHHHHHHHHHHcCCCCeEEEECCCccc
Confidence 7888774 222 22224555543 33566888 9999999874
No 252
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=27.97 E-value=45 Score=30.06 Aligned_cols=41 Identities=20% Similarity=0.223 Sum_probs=31.2
Q ss_pred ccEEEEc--Ccccc----cccChHHHHHHhhhcCCeEEEeccccccc
Q psy10669 124 FDFLSSG--TTCYS----RCLDYARFRQICDETDSIMFADMSHISGL 164 (337)
Q Consensus 124 pklII~~--~S~~~----~~~d~~~l~eia~~~ga~l~vD~AH~~Gl 164 (337)
++++++- .+.|+ -+.|+..+..+.+..|..+++|.+|+.|-
T Consensus 174 ~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 174 WQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp CCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 6788764 23452 56777778888777899999999999983
No 253
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=26.00 E-value=89 Score=29.38 Aligned_cols=62 Identities=6% Similarity=-0.095 Sum_probs=34.6
Q ss_pred CCHHHH-H-HHhh---hhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC-CCCCCCcceeec-CCCchhHHHHHH
Q psy10669 42 TSLAVL-E-CLGS---CLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN-LDPEQWGCNVQP-YSGSPANFAVCE 114 (337)
Q Consensus 42 ~~p~V~-~-a~~~---~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg-~~~~~~~~~v~~-~Sgt~AN~~v~~ 114 (337)
.+|.|. + |+.. .+. ++ ...++++ .+....++. ++++++++ .+. -.|.| +||+.||..++.
T Consensus 71 ~~p~v~~~~A~~~~~~~~~-~~--~~~~~~~--~~~~~~~la----~~la~~~~~~~~----~~v~~~~~gseA~~~aik 137 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAA-LN--KPSNSDV--YSVAMARFV----ETFARVLGDPAL----PHLFFVEGGALAVENALK 137 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHH-TC--CCCTTTC--CCHHHHHHH----HHHHHHHCCTTC----CEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-hc--CCCCccc--CCHHHHHHH----HHHHHhcCCCCC----CEEEEeCchHHHHHHHHH
Confidence 489999 8 8877 433 22 1112222 122223333 47788886 222 13555 556999988777
Q ss_pred hh
Q psy10669 115 KA 116 (337)
Q Consensus 115 aL 116 (337)
++
T Consensus 138 ~a 139 (449)
T 2cjg_A 138 AA 139 (449)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 254
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=23.57 E-value=3.5e+02 Score=23.16 Aligned_cols=53 Identities=15% Similarity=0.099 Sum_probs=35.6
Q ss_pred CccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCcccccccEEEEcCcc
Q psy10669 69 GGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTC 133 (337)
Q Consensus 69 ~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~~~a~pklII~~~S~ 133 (337)
.|-++-++.-.++.+++.++ |.++ .-|-.+||..|..+. ..+ + .++|++++..
T Consensus 31 ~G~eNT~~tl~la~era~e~-~Ik~----iVVASssG~TA~k~~-e~~-~-----~~lVvVTh~~ 83 (206)
T 1t57_A 31 PGKENTERVLELVGERADQL-GIRN----FVVASVSGETALRLS-EMV-E-----GNIVSVTHHA 83 (206)
T ss_dssp CSGGGHHHHHHHHHHHHHHH-TCCE----EEEECSSSHHHHHHH-TTC-C-----SEEEEECCCT
T ss_pred CCcccHHHHHHHHHHHHHHc-CCCE----EEEEeCCCHHHHHHH-HHc-c-----CCEEEEeCcC
Confidence 45677777777788888887 7776 456667787776653 322 2 2899998543
No 255
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=23.49 E-value=43 Score=30.66 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=32.5
Q ss_pred ccEEEEc-Ccccccc---cChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669 124 FDFLSSG-TTCYSRC---LDYARFRQICDETDSIMFADMSHISGLIA 166 (337)
Q Consensus 124 pklII~~-~S~~~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~ 166 (337)
++++++. .+.|+.. .|+..|..+.+ .+.++++|.+|+...-+
T Consensus 184 ~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHsvq~p~ 229 (298)
T 3fs2_A 184 PNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDATHSVQQPG 229 (298)
T ss_dssp CCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHHHHTCCCC
T ss_pred CeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCCCccccCC
Confidence 6788886 4556533 58888888877 89999999999975554
Done!