Your job contains 1 sequence.
>psy10669
MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE
GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTN
NARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILY
DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG
YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVD
FQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQADL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10669
(337 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0029823 - symbol:CG3011 species:7227 "Drosophila m... 406 1.4e-98 4
MGI|MGI:98299 - symbol:Shmt1 "serine hydroxymethyltransfe... 391 5.3e-90 4
UNIPROTKB|E2RIV3 - symbol:SHMT1 "Uncharacterized protein"... 392 1.2e-88 4
UNIPROTKB|P34897 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.5e-88 4
RGD|1308582 - symbol:Shmt2 "serine hydroxymethyltransfera... 378 2.5e-88 4
UNIPROTKB|P34896 - symbol:SHMT1 "Serine hydroxymethyltran... 383 6.5e-88 4
UNIPROTKB|E1BS67 - symbol:SHMT1 "Uncharacterized protein"... 402 8.3e-88 4
UNIPROTKB|A8MYA6 - symbol:SHMT1 "Serine hydroxymethyltran... 392 9.7e-88 3
RGD|1312011 - symbol:Shmt1 "serine hydroxymethyltransfera... 390 7.0e-87 4
UNIPROTKB|P14519 - symbol:SHMT2 "Serine hydroxymethyltran... 376 1.2e-86 4
UNIPROTKB|Q3SZ20 - symbol:SHMT2 "Serine hydroxymethyltran... 379 2.4e-86 4
UNIPROTKB|Q5E9P9 - symbol:SHMT1 "Serine hydroxymethyltran... 372 3.9e-86 4
ZFIN|ZDB-GENE-071213-1 - symbol:shmt2 "serine hydroxymeth... 374 1.1e-84 4
UNIPROTKB|E2R4L7 - symbol:SHMT2 "Uncharacterized protein"... 378 1.2e-79 3
ZFIN|ZDB-GENE-040426-1558 - symbol:shmt1 "serine hydroxym... 390 2.7e-78 3
DICTYBASE|DDB_G0291652 - symbol:shmt2 "serine hydroxymeth... 367 1.8e-77 4
TAIR|locus:2127806 - symbol:SHM3 "serine hydroxymethyltra... 369 7.7e-77 4
SGD|S000000467 - symbol:SHM1 "Mitochondrial serine hydrox... 322 6.8e-75 4
UNIPROTKB|G4NDG3 - symbol:MGG_00923 "Serine hydroxymethyl... 321 2.7e-74 4
ASPGD|ASPL0000008876 - symbol:AN10745 species:162425 "Eme... 347 2.3e-73 4
UNIPROTKB|G4MRB4 - symbol:MGG_13781 "Serine hydroxymethyl... 329 1.9e-72 4
TAIR|locus:2005518 - symbol:SHM1 "serine transhydroxymeth... 343 7.6e-72 3
TAIR|locus:2129251 - symbol:SHM4 "serine hydroxymethyltra... 386 1.4e-71 3
TAIR|locus:2119545 - symbol:EDA36 "EMBRYO SAC DEVELOPMENT... 399 1.6e-70 3
GENEDB_PFALCIPARUM|PFL1720w - symbol:PFL1720w "Serine hyd... 312 7.2e-68 4
UNIPROTKB|Q8I566 - symbol:PFL1720w "Serine hydroxymethylt... 312 7.2e-68 4
TAIR|locus:2030581 - symbol:SHM6 "serine hydroxymethyltra... 342 4.8e-67 4
TAIR|locus:2148463 - symbol:SHM2 "serine hydroxymethyltra... 330 3.9e-65 3
CGD|CAL0003822 - symbol:SHM1 species:5476 "Candida albica... 328 1.3e-64 3
UNIPROTKB|Q59PP7 - symbol:SHM1 "Putative uncharacterized ... 328 1.3e-64 3
UNIPROTKB|Q60V73 - symbol:mel-32 "Serine hydroxymethyltra... 356 2.3e-64 2
POMBASE|SPAC18G6.04c - symbol:shm2 "serine hydroxymethylt... 343 2.4e-64 3
WB|WBGene00003214 - symbol:mel-32 species:6239 "Caenorhab... 360 2.9e-64 2
UNIPROTKB|P50432 - symbol:mel-32 "Serine hydroxymethyltra... 360 2.9e-64 2
ASPGD|ASPL0000040474 - symbol:AN3058 species:162425 "Emer... 315 9.5e-61 3
SGD|S000004048 - symbol:SHM2 "Cytosolic serine hydroxymet... 327 4.8e-60 2
DICTYBASE|DDB_G0277947 - symbol:shmt1 "serine hydroxymeth... 349 6.1e-60 2
CGD|CAL0001464 - symbol:SHM2 species:5476 "Candida albica... 318 6.2e-60 2
UNIPROTKB|O13426 - symbol:SHM2 "Serine hydroxymethyltrans... 318 6.2e-60 2
POMBASE|SPAC24C9.12c - symbol:SPAC24C9.12c "glycine hydro... 328 1.8e-58 2
TAIR|locus:2035937 - symbol:SHM7 "serine hydroxymethyltra... 329 4.0e-56 3
TIGR_CMR|CHY_2557 - symbol:CHY_2557 "serine hydroxymethyl... 263 6.9e-54 3
TIGR_CMR|GSU_1607 - symbol:GSU_1607 "serine hydroxymethyl... 255 4.6e-53 3
TIGR_CMR|CJE_0451 - symbol:CJE_0451 "serine hydroxymethyl... 255 1.8e-50 3
UNIPROTKB|P0A825 - symbol:glyA species:83333 "Escherichia... 245 2.1e-50 3
UNIPROTKB|Q4KLG7 - symbol:Shmt1 "Serine hydroxymethyltran... 332 3.4e-49 3
UNIPROTKB|B4DLV4 - symbol:SHMT2 "Serine hydroxymethyltran... 330 3.4e-49 3
UNIPROTKB|Q9KMP4 - symbol:glyA2 "Serine hydroxymethyltran... 246 4.5e-49 3
TIGR_CMR|VC_A0278 - symbol:VC_A0278 "serine hydroxymethyl... 246 4.5e-49 3
UNIPROTKB|F1SL74 - symbol:LOC100626911 "Serine hydroxymet... 381 6.1e-49 3
UNIPROTKB|B4DPM9 - symbol:SHMT1 "Serine hydroxymethyltran... 335 9.0e-49 3
UNIPROTKB|Q9KTG1 - symbol:glyA1 "Serine hydroxymethyltran... 247 1.3e-48 3
TIGR_CMR|VC_0941 - symbol:VC_0941 "serine hydroxymethyltr... 247 1.3e-48 3
TIGR_CMR|NSE_0218 - symbol:NSE_0218 "serine hydroxymethyl... 243 6.8e-47 3
TIGR_CMR|SO_3471 - symbol:SO_3471 "serine hydroxymethyltr... 241 2.0e-46 3
TIGR_CMR|SPO_1572 - symbol:SPO_1572 "serine hydroxymethyl... 244 3.3e-46 3
TIGR_CMR|SPO_2940 - symbol:SPO_2940 "serine hydroxymethyl... 244 3.3e-46 3
TIGR_CMR|BA_5558 - symbol:BA_5558 "serine hydroxymethyltr... 230 4.9e-46 3
TIGR_CMR|ECH_0311 - symbol:ECH_0311 "serine hydroxymethyl... 237 1.1e-45 3
UNIPROTKB|O53615 - symbol:glyA2 "Serine hydroxymethyltran... 233 3.0e-43 3
TIGR_CMR|CPS_3844 - symbol:CPS_3844 "serine hydroxymethyl... 230 6.6e-43 3
UNIPROTKB|H0YIZ0 - symbol:SHMT2 "Serine hydroxymethyltran... 330 1.2e-41 2
TIGR_CMR|CBU_1419 - symbol:CBU_1419 "serine hydroxymethyl... 225 1.3e-41 3
TIGR_CMR|CPS_0728 - symbol:CPS_0728 "serine hydroxymethyl... 223 2.1e-41 3
TIGR_CMR|CPS_2477 - symbol:CPS_2477 "serine hydroxymethyl... 224 7.5e-41 3
TIGR_CMR|CPS_4031 - symbol:CPS_4031 "serine hydroxymethyl... 224 7.5e-41 3
TIGR_CMR|DET_0436 - symbol:DET_0436 "Serine hydroxymethyl... 220 2.5e-40 3
TIGR_CMR|APH_0154 - symbol:APH_0154 "serine hydroxymethyl... 219 1.7e-39 3
UNIPROTKB|G3V5L0 - symbol:SHMT2 "Serine hydroxymethyltran... 382 4.0e-39 2
UNIPROTKB|G3V4W5 - symbol:SHMT2 "Serine hydroxymethyltran... 415 7.8e-39 1
UNIPROTKB|G3V2Y4 - symbol:SHMT2 "Serine hydroxymethyltran... 287 2.4e-37 2
UNIPROTKB|O53441 - symbol:glyA1 "Serine hydroxymethyltran... 239 2.9e-36 2
UNIPROTKB|J3KRZ5 - symbol:SHMT1 "Serine hydroxymethyltran... 383 1.9e-35 1
UNIPROTKB|G3V241 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.4e-35 1
UNIPROTKB|G3V2E4 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.4e-35 1
UNIPROTKB|G3V2W0 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.4e-35 1
UNIPROTKB|G3V3Y8 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.4e-35 1
UNIPROTKB|G3V4T0 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.4e-35 1
UNIPROTKB|G3V4X0 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.4e-35 1
UNIPROTKB|G3V540 - symbol:SHMT2 "Serine hydroxymethyltran... 382 2.4e-35 1
UNIPROTKB|J3KRK5 - symbol:SHMT1 "Serine hydroxymethyltran... 197 2.0e-15 1
UNIPROTKB|I3LGT5 - symbol:I3LGT5 "Serine hydroxymethyltra... 130 5.9e-08 1
>FB|FBgn0029823 [details] [associations]
symbol:CG3011 species:7227 "Drosophila melanogaster"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006564 "L-serine biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0048149 "behavioral response
to ethanol" evidence=IMP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0048149
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 HSSP:P07511
OMA:VDLRESH UniGene:Dm.11053 GeneID:31524 KEGG:dme:Dmel_CG3011
FlyBase:FBgn0029823 GenomeRNAi:31524 NextBio:774055 EMBL:BT011432
RefSeq:NP_572278.1 SMR:Q9W457 IntAct:Q9W457 MINT:MINT-313386
STRING:Q9W457 EnsemblMetazoa:FBtr0070827 UCSC:CG3011-RA
InParanoid:Q9W457 Uniprot:Q9W457
Length = 537
Score = 406 (148.0 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 78/112 (69%), Positives = 89/112 (79%)
Query: 1 MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
M+ +L LAQ DPEL LIKKEK RQ G+E+IASENFTS+AVLE L SCL NKYSE
Sbjct: 71 MADQKLLQTPLAQGDPELAELIKKEKERQREGLEMIASENFTSVAVLESLSSCLTNKYSE 130
Query: 61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G PGKRYYGGN++ID IE++AQQR + FNLD E+WG NVQPYSGSPAN AV
Sbjct: 131 GYPGKRYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAV 182
Score = 396 (144.5 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 74/116 (63%), Positives = 89/116 (76%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
GV+ G+K+LYD EE+IN AVFPSLQGGPHN+A+ IATA QA+S EFK+YQ QV
Sbjct: 327 GVRSTKANGDKVLYDLEERINQAVFPSLQGGPHNNAVAGIATAFKQAKSPEFKAYQTQVL 386
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
NA L D +I RGY V TGGTDVHL+L+D+RK LTG+K E +LEE+ IACNKNT
Sbjct: 387 KNAKALCDGLISRGYQVATGGTDVHLVLVDVRKAGLTGAKAEYILEEVGIACNKNT 442
Score = 147 (56.8 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 102 PYSGSPANFAV-CEK-ALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + +K A N R + +G +CYSR LDYARFRQICD+ + + ADM+
Sbjct: 226 PYKVNPETGIIDYDKLAEAAKNFRPQIIIAGISCYSRLLDYARFRQICDDVGAYLMADMA 285
Query: 160 HISGLIA 166
H++G++A
Sbjct: 286 HVAGIVA 292
Score = 73 (30.8 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 285 SLAAEIQA--ISG-PKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
+L +QA ++G PK+ D+ L +N ++ +V ++K + +S +F +PG
Sbjct: 482 ALKVGVQAAKLAGSPKITDYHKTLAENVELKAQVDEIRKNVAQFSRKFPLPG 533
>MGI|MGI:98299 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006544 "glycine metabolic process" evidence=ISO]
[GO:0006545 "glycine biosynthetic process" evidence=ISO]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0006565
"L-serine catabolic process" evidence=ISO] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=ISO] [GO:0009113 "purine nucleobase
biosynthetic process" evidence=ISO] [GO:0016597 "amino acid
binding" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=ISO] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046655 "folic acid metabolic process" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051289
"protein homotetramerization" evidence=ISO] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
MGI:MGI:98299 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0009113 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565
EMBL:AL596215 GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 OrthoDB:EOG42Z4Q2
ChiTaRS:SHMT1 EMBL:AF237702 EMBL:BC026055 EMBL:X94478 EMBL:X94479
IPI:IPI00118059 PIR:JC4959 RefSeq:NP_033197.2 UniGene:Mm.364956
PDB:1EJI PDBsum:1EJI ProteinModelPortal:P50431 SMR:P50431
STRING:P50431 PhosphoSite:P50431 REPRODUCTION-2DPAGE:P50431
SWISS-2DPAGE:P50431 PaxDb:P50431 PRIDE:P50431
Ensembl:ENSMUST00000018744 GeneID:20425 KEGG:mmu:20425
InParanoid:Q8R0X9 OMA:KEALEPW ChEMBL:CHEMBL4396
EvolutionaryTrace:P50431 NextBio:298438 Bgee:P50431
CleanEx:MM_SHMT1 Genevestigator:P50431
GermOnline:ENSMUSG00000020534 Uniprot:P50431
Length = 478
Score = 391 (142.7 bits), Expect = 5.3e-90, Sum P(4) = 5.3e-90
Identities = 74/111 (66%), Positives = 90/111 (81%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L +D E+YS+IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 11 SHEKMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 70
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG +FIDE+E++ Q+R+L+A++LDP+ WG NVQPYSGSPANFAV
Sbjct: 71 YPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAV 121
Score = 329 (120.9 bits), Expect = 5.3e-90, Sum P(4) = 5.3e-90
Identities = 66/117 (56%), Positives = 81/117 (69%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTG++ Y+ E IN+AVFP LQGGPHNHAI +A A+ QA + EFK YQ QV
Sbjct: 266 GVRSVDPKTGKETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTTEFKIYQLQV 325
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN LSD + + GY +VTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 326 LANCRALSDALTELGYKIVTGGSDNHLILMDLRSKGTDGGRAEKVLEACSIACNKNT 382
Score = 135 (52.6 bits), Expect = 5.3e-90, Sum P(4) = 5.3e-90
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY P + L N + F + +GT+CYSR LDYAR R+I D+ + + ADM+
Sbjct: 165 PYKVYPETGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMA 224
Query: 160 HISGLIA-GV 168
HISGL+A GV
Sbjct: 225 HISGLVAAGV 234
Score = 85 (35.0 bits), Expect = 5.3e-90, Sum P(4) = 5.3e-90
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
GI L +IQ+ K L +F+ L +E I VA L++E+E++++ F +PG D
Sbjct: 422 GIELTLQIQSHMATKATLKEFKEKLAGDEKIQSAVATLREEVENFASNFSLPGLPD 477
>UNIPROTKB|E2RIV3 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0051262 "protein tetramerization" evidence=IEA]
[GO:0046655 "folic acid metabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739
GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 GO:GO:0009113
GO:GO:0006544 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 CTD:6470
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AAEX03003713
EMBL:AAEX03003714 RefSeq:XP_851819.2 Ensembl:ENSCAFT00000028996
GeneID:489536 KEGG:cfa:489536 Uniprot:E2RIV3
Length = 484
Score = 392 (143.0 bits), Expect = 1.2e-88, Sum P(4) = 1.2e-88
Identities = 75/111 (67%), Positives = 88/111 (79%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L D E+Y++IKKE +RQ G+ELIASENFTS AVLE LGSCL NKYSEG
Sbjct: 17 SHDKMLAEPLKDNDTEVYNIIKKESNRQRVGLELIASENFTSRAVLEALGSCLNNKYSEG 76
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG +FIDE+EI+ Q+R+L+ + LDPE WG NVQPYSGSPANFAV
Sbjct: 77 YPGQRYYGGTEFIDELEILCQKRALQVYGLDPECWGVNVQPYSGSPANFAV 127
Score = 326 (119.8 bits), Expect = 1.2e-88, Sum P(4) = 1.2e-88
Identities = 65/117 (55%), Positives = 83/117 (70%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTG++ LY+ E IN+AVFP LQGGPHNHAI +A A+ QA + EF+ YQ QV
Sbjct: 272 GVRSVDPKTGKETLYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFRLYQHQV 331
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN L++ +++ GY VVTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 332 VANCRVLAETLMELGYKVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNT 388
Score = 136 (52.9 bits), Expect = 1.2e-88, Sum P(4) = 1.2e-88
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + L N F + +GT+CYSR LDYAR R+I D+ + + ADM+
Sbjct: 171 PYKVNPETGYINYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMA 230
Query: 160 HISGLIA-GV 168
HISGL+A GV
Sbjct: 231 HISGLVAAGV 240
Score = 73 (30.8 bits), Expect = 1.2e-88, Sum P(4) = 1.2e-88
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
GI L +IQ G + L +F+ L +E + + AL++E+E +++ F +PG D
Sbjct: 428 GIELTLQIQNDIGARATLKEFREKLAGDEKHQRAIRALREEVESFASLFPLPGLPD 483
>UNIPROTKB|P34897 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006564 "L-serine biosynthetic process"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008732 "L-allo-threonine aldolase
activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IDA]
[GO:0006730 "one-carbon metabolic process" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0008284
EMBL:CH471054 DrugBank:DB00114 GO:GO:0003682 GO:GO:0016597
GO:GO:0051289 GO:GO:0042645 DrugBank:DB00145 DrugBank:DB00116
GO:GO:0008168 GO:GO:0006730 GO:GO:0035999 GO:GO:0006564
GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
HOVERGEN:HBG002807 CTD:6472 EMBL:AK315916 EMBL:BT006866
EMBL:AC137834 EMBL:BC011911 EMBL:BC013677 EMBL:BC032584
EMBL:BC044211 EMBL:Y12331 EMBL:U23143 EMBL:L11932 IPI:IPI00002520
IPI:IPI00795816 PIR:B46746 RefSeq:NP_001159828.1
RefSeq:NP_001159829.1 RefSeq:NP_001159830.1 RefSeq:NP_001159831.1
RefSeq:NP_005403.2 UniGene:Hs.741179 PDB:3OU5 PDBsum:3OU5
ProteinModelPortal:P34897 SMR:P34897 IntAct:P34897 STRING:P34897
PhosphoSite:P34897 DMDM:6226865 PaxDb:P34897 PRIDE:P34897
DNASU:6472 Ensembl:ENST00000328923 Ensembl:ENST00000414700
Ensembl:ENST00000449049 Ensembl:ENST00000553474
Ensembl:ENST00000557487 GeneID:6472 KEGG:hsa:6472 UCSC:uc001snf.2
GeneCards:GC12P057623 HGNC:HGNC:10852 HPA:HPA020543 HPA:HPA020549
MIM:138450 neXtProt:NX_P34897 PharmGKB:PA35755 InParanoid:P34897
PhylomeDB:P34897 BioCyc:MetaCyc:HS00049-MONOMER ChiTaRS:SHMT2
EvolutionaryTrace:P34897 GenomeRNAi:6472 NextBio:25141
ArrayExpress:P34897 Bgee:P34897 CleanEx:HS_SHMT2
Genevestigator:P34897 GermOnline:ENSG00000182199 Uniprot:P34897
Length = 504
Score = 382 (139.5 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 150
Score = 330 (121.2 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 68/125 (54%), Positives = 89/125 (71%)
Query: 162 SGLI---AGVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI GVK V KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 287 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 346
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y QV NA ++D +++RGY +V+GGTD HL+L+DLR L G++ E VLE ++I
Sbjct: 347 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSIT 406
Query: 278 CNKNT 282
NKNT
Sbjct: 407 ANKNT 411
Score = 130 (50.8 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + + AL R + +GT+ Y+R +DYAR R++CDE + + ADM+
Sbjct: 194 PYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMA 253
Query: 160 HISGLIA 166
HISGL+A
Sbjct: 254 HISGLVA 260
Score = 82 (33.9 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 15/51 (29%), Positives = 34/51 (66%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
G+++ E+++ + KL DF++ L K+ + +++A L++ +E ++ F MPG
Sbjct: 451 GVNIGLEVKSKTA-KLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPG 500
>RGD|1308582 [details] [associations]
symbol:Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO;IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISO;IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA;TAS]
[GO:0006545 "glycine biosynthetic process" evidence=IDA]
[GO:0006563 "L-serine metabolic process" evidence=TAS] [GO:0006564
"L-serine biosynthetic process" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=ISO] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IDA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016597 "amino
acid binding" evidence=IPI] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 RGD:1308582
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743
GO:GO:0005758 GO:GO:0005759 GO:GO:0008284 GO:GO:0003682
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0042645
GO:GO:0008168 GO:GO:0035999 GO:GO:0006564 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 CTD:6472
OrthoDB:EOG4G4GQ7 EMBL:BC085331 IPI:IPI00195109
RefSeq:NP_001008323.1 UniGene:Rn.9214 SMR:Q5U3Z7 IntAct:Q5U3Z7
STRING:Q5U3Z7 Ensembl:ENSRNOT00000011082 GeneID:299857
KEGG:rno:299857 InParanoid:Q5U3Z7 NextBio:645904
Genevestigator:Q5U3Z7 Uniprot:Q5U3Z7
Length = 504
Score = 378 (138.1 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 68/102 (66%), Positives = 85/102 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 48 SLSDSDPEIWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLA 149
Score = 336 (123.3 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 68/125 (54%), Positives = 89/125 (71%)
Query: 162 SGLIAGVKGVT----KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI KGV KTG++I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 287 SGLIFYRKGVRTVDPKTGQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 346
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y QV NA ++D ++KRGY +V+GGTD HL+L+DLR L G++ E VLE ++I
Sbjct: 347 FREYSLQVLRNAQAMADALLKRGYSLVSGGTDTHLVLVDLRPKGLDGARAERVLELVSIT 406
Query: 278 CNKNT 282
NKNT
Sbjct: 407 ANKNT 411
Score = 130 (50.8 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + + AL R + +GT+ Y+R +DYAR R++CDE + + ADM+
Sbjct: 194 PYKLNPQTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMA 253
Query: 160 HISGLIA 166
HISGL+A
Sbjct: 254 HISGLVA 260
Score = 80 (33.2 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
Identities = 15/51 (29%), Positives = 34/51 (66%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
G+++ E++ + KL DF++ L K+ + +++A L++++E ++ F MPG
Sbjct: 451 GVNIGLEVKRKTA-KLQDFKSFLLKDPETSQRLANLRQQVEQFARGFPMPG 500
>UNIPROTKB|P34896 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051262 "protein tetramerization" evidence=IDA]
[GO:0046655 "folic acid metabolic process" evidence=IDA;TAS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA;TAS] [GO:0006565
"L-serine catabolic process" evidence=IDA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IDA] [GO:0006766 "vitamin
metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin
metabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen
compound metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0045329 "carnitine
biosynthetic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
UniPathway:UPA00193 Reactome:REACT_111217 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 EMBL:L11931
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0042803
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 DrugBank:DB00114
GO:GO:0016597 GO:GO:0051289 GO:GO:0045329 DrugBank:DB00145
DrugBank:DB00116 EMBL:CH471196 GO:GO:0009113 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 DrugBank:DB01055 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 EMBL:L23928 EMBL:Y14485 EMBL:Y14486 EMBL:Y14487
EMBL:BC007979 EMBL:BC022874 EMBL:BC038598 IPI:IPI00002519
IPI:IPI00220668 IPI:IPI00220669 PIR:A46746 RefSeq:NP_004160.3
RefSeq:NP_683718.1 UniGene:Hs.513987 UniGene:Hs.636044 PDB:1BJ4
PDBsum:1BJ4 ProteinModelPortal:P34896 SMR:P34896 IntAct:P34896
STRING:P34896 PhosphoSite:P34896 DMDM:462184 PaxDb:P34896
PRIDE:P34896 DNASU:6470 Ensembl:ENST00000316694
Ensembl:ENST00000352886 Ensembl:ENST00000354098 GeneID:6470
KEGG:hsa:6470 UCSC:uc002gsz.3 UCSC:uc002gtb.3 GeneCards:GC17M018231
HGNC:HGNC:10850 HPA:HPA023314 MIM:182144 neXtProt:NX_P34896
PharmGKB:PA35753 InParanoid:P34896 OMA:VDLRESH BindingDB:P34896
ChEMBL:CHEMBL1772927 ChiTaRS:SHMT1 EvolutionaryTrace:P34896
GenomeRNAi:6470 NextBio:25133 ArrayExpress:P34896 Bgee:P34896
CleanEx:HS_SHMT1 Genevestigator:P34896 GermOnline:ENSG00000176974
Uniprot:P34896
Length = 483
Score = 383 (139.9 bits), Expect = 6.5e-88, Sum P(4) = 6.5e-88
Identities = 73/111 (65%), Positives = 88/111 (79%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L +D E+Y++IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 17 SHDKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 76
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG +FIDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV
Sbjct: 77 YPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAV 127
Score = 335 (123.0 bits), Expect = 6.5e-88, Sum P(4) = 6.5e-88
Identities = 68/117 (58%), Positives = 83/117 (70%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GVK V KTG++ILY+ E IN+AVFP LQGGPHNHAI +A A+ QA + EFK YQ QV
Sbjct: 272 GVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQV 331
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN LS+ + + GY +VTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 332 VANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNT 388
Score = 134 (52.2 bits), Expect = 6.5e-88, Sum P(4) = 6.5e-88
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + L N F + +GT+CYSR L+YAR R+I DE + + ADM+
Sbjct: 171 PYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMA 230
Query: 160 HISGLIA-GV 168
HISGL+A GV
Sbjct: 231 HISGLVAAGV 240
Score = 68 (29.0 bits), Expect = 6.5e-88, Sum P(4) = 6.5e-88
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
GI L +IQ+ +G + L +F+ L + V AL++E+E +++ F +PG D
Sbjct: 428 GIELTLQIQSDTGVRATLKEFKERL-AGDKYQAAVQALREEVESFASLFPLPGLPD 482
>UNIPROTKB|E1BS67 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0046655
"folic acid metabolic process" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 GO:GO:0004372 PANTHER:PTHR11680
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AADN02023704
IPI:IPI00573440 Ensembl:ENSGALT00000008093 Uniprot:E1BS67
Length = 486
Score = 402 (146.6 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 76/111 (68%), Positives = 90/111 (81%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S S ML L DPE+Y++IKKEK RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 19 SHSKMLLEPLDSNDPEVYNIIKKEKQRQRLGLELIASENFASCAVLEALGSCLNNKYSEG 78
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG +F+DE+E + Q+R+L+AF LDP++WG NVQPYSGSPANFAV
Sbjct: 79 YPGQRYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPYSGSPANFAV 129
Score = 322 (118.4 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 63/110 (57%), Positives = 78/110 (70%)
Query: 173 KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL 232
KTG++ LY+ E IN AVFP LQGGPHNHAI IA A+ QA + EFK+YQ QV AN L
Sbjct: 282 KTGKETLYNLESLINQAVFPGLQGGPHNHAIAGIAVALQQAMTPEFKAYQQQVVANCKTL 341
Query: 233 SDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+ +++ GY +VTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 342 AAALMEMGYDIVTGGSDNHLILLDLRNRGTDGGRAERVLELCSIACNKNT 391
Score = 129 (50.5 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD---FLSSGTTCYSRCLDYARFRQICDETDSIMFADM 158
PY +P + L N F +++G +CYSR LDYAR RQI + + + ADM
Sbjct: 173 PYKVNPKTGYIDYDKLEENARLFHPKLIIAAGVSCYSRNLDYARMRQIANANSAYLMADM 232
Query: 159 SHISGLIA-GV 168
+HISGL+A GV
Sbjct: 233 AHISGLVAAGV 243
Score = 66 (28.3 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
GI L +Q PK L +F+ L + E ++ ALK+E+E ++ F +PG
Sbjct: 431 GIELTLRVQKDMNPKATLKEFKEKLEE-EKYQGELKALKEEVEAFAATFPLPG 482
>UNIPROTKB|A8MYA6 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
EMBL:AC127537 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 IPI:IPI00793862
ProteinModelPortal:A8MYA6 SMR:A8MYA6 STRING:A8MYA6
Ensembl:ENST00000395685 ArrayExpress:A8MYA6 Bgee:A8MYA6
Uniprot:A8MYA6
Length = 446
Score = 392 (143.0 bits), Expect = 9.7e-88, Sum P(3) = 9.7e-88
Identities = 86/175 (49%), Positives = 115/175 (65%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GVK V KTG++ILY+ E IN+AVFP LQGGPHNHAI +A A+ QA + EFK YQ QV
Sbjct: 272 GVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQV 331
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--G 283
AN LS+ + + GY +VTGG+D HLIL+DLR G + E VLE +IACNKNT G
Sbjct: 332 VANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPG 391
Query: 284 ISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
I L +IQ+ +G + L +F+ L + V AL++E+E +++ F +PG D
Sbjct: 392 IELTLQIQSDTGVRATLKEFKERL-AGDKYQAAVQALREEVESFASLFPLPGLPD 445
Score = 383 (139.9 bits), Expect = 9.7e-88, Sum P(3) = 9.7e-88
Identities = 73/111 (65%), Positives = 88/111 (79%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L +D E+Y++IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 17 SHDKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 76
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG +FIDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV
Sbjct: 77 YPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAV 127
Score = 134 (52.2 bits), Expect = 9.7e-88, Sum P(3) = 9.7e-88
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + L N F + +GT+CYSR L+YAR R+I DE + + ADM+
Sbjct: 171 PYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMA 230
Query: 160 HISGLIA-GV 168
HISGL+A GV
Sbjct: 231 HISGLVAAGV 240
>RGD|1312011 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISO;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA;TAS] [GO:0006544 "glycine
metabolic process" evidence=IDA;TAS] [GO:0006545 "glycine
biosynthetic process" evidence=IDA] [GO:0006563 "L-serine metabolic
process" evidence=TAS] [GO:0006565 "L-serine catabolic process"
evidence=IEA;ISO] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IDA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA;ISO] [GO:0016597 "amino acid binding" evidence=IPI]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO;IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0046655 "folic acid metabolic
process" evidence=IEA;ISO] [GO:0051262 "protein tetramerization"
evidence=ISO] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 RGD:1312011 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0009113
GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 GO:GO:0008732 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264
CTD:6470 GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 UniGene:Rn.3684 EMBL:AY383687 IPI:IPI00421364
RefSeq:NP_001041307.1 SMR:Q6TXG7 STRING:Q6TXG7
Ensembl:ENSRNOT00000007092 GeneID:287379 KEGG:rno:287379
UCSC:RGD:1312011 InParanoid:Q6TXG7 NextBio:625985
Genevestigator:Q6TXG7 Uniprot:Q6TXG7
Length = 681
Score = 390 (142.3 bits), Expect = 7.0e-87, Sum P(4) = 7.0e-87
Identities = 74/111 (66%), Positives = 90/111 (81%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L ++D E+YS+IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 214 SHEKMLTQPLKESDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 273
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG +FIDE+E + Q+R+L+A++LDP+ WG NVQPYSGSPANFAV
Sbjct: 274 YPGQRYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAV 324
Score = 332 (121.9 bits), Expect = 7.0e-87, Sum P(4) = 7.0e-87
Identities = 67/117 (57%), Positives = 81/117 (69%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTGE+ Y+ E IN+AVFP LQGGPHNHAI +A A+ QA + EFK YQ QV
Sbjct: 469 GVRSVDPKTGEETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTTEFKIYQLQV 528
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN LSD + + GY +VTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 529 LANCRALSDALTELGYKIVTGGSDNHLILMDLRPKGTDGGRAEKVLEACSIACNKNT 585
Score = 134 (52.2 bits), Expect = 7.0e-87, Sum P(4) = 7.0e-87
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY P + L N + F + +GT+CYSR LDYAR R+I D+ + + ADM+
Sbjct: 368 PYKVYPDTGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMA 427
Query: 160 HISGLIA-GV 168
HISGL+A GV
Sbjct: 428 HISGLVAAGV 437
Score = 79 (32.9 bits), Expect = 7.0e-87, Sum P(4) = 7.0e-87
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
GI L +IQ+ + L +F+ L +E VAAL++E+E++++ F +PG D
Sbjct: 625 GIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAVAALREEVENFASNFSLPGLPD 680
>UNIPROTKB|P14519 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0005743 GO:GO:0003682 GO:GO:0042645 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807 CTD:6472
EMBL:X91902 RefSeq:NP_001075874.1 UniGene:Ocu.3292
ProteinModelPortal:P14519 SMR:P14519 STRING:P14519 PRIDE:P14519
GeneID:100009293 Uniprot:P14519
Length = 504
Score = 376 (137.4 bits), Expect = 1.2e-86, Sum P(4) = 1.2e-86
Identities = 68/102 (66%), Positives = 84/102 (82%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ TDPE++ L+++EK RQ G+ELIASENF A LE LGSCL NKYSEG PGKRYYG
Sbjct: 48 SLSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLA 149
Score = 328 (120.5 bits), Expect = 1.2e-86, Sum P(4) = 1.2e-86
Identities = 67/125 (53%), Positives = 89/125 (71%)
Query: 162 SGLIAGVKGVT----KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI KGV KTG++I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 287 SGLIFYRKGVRTVDPKTGQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 346
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y QV NA ++D +++RGY +V+GGTD HL+L+DLR L G++ E VLE ++I
Sbjct: 347 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSIT 406
Query: 278 CNKNT 282
NKNT
Sbjct: 407 ANKNT 411
Score = 130 (50.8 bits), Expect = 1.2e-86, Sum P(4) = 1.2e-86
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + + AL R + +GT+ Y+R +DYAR R++CDE + + ADM+
Sbjct: 194 PYKLNPQTGLIDYEQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMA 253
Query: 160 HISGLIA 166
HISGL+A
Sbjct: 254 HISGLVA 260
Score = 74 (31.1 bits), Expect = 1.2e-86, Sum P(4) = 1.2e-86
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
G+++ E++ + KL DF++ L K+ + + +A L++ ++ ++ F MPG
Sbjct: 451 GVNIGLEVKRKTA-KLQDFKSFLLKDPETSQHLADLRRRVQQFARAFPMPG 500
>UNIPROTKB|Q3SZ20 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743 GO:GO:0003682
GO:GO:0042645 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 EMBL:BC103242
IPI:IPI00718654 RefSeq:NP_001029454.1 UniGene:Bt.49106
ProteinModelPortal:Q3SZ20 SMR:Q3SZ20 STRING:Q3SZ20 PRIDE:Q3SZ20
Ensembl:ENSBTAT00000038244 GeneID:507197 KEGG:bta:507197 CTD:6472
InParanoid:Q3SZ20 OrthoDB:EOG4G4GQ7 NextBio:20867950 Uniprot:Q3SZ20
Length = 504
Score = 379 (138.5 bits), Expect = 2.4e-86, Sum P(4) = 2.4e-86
Identities = 68/102 (66%), Positives = 85/102 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 48 SLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLA 149
Score = 321 (118.1 bits), Expect = 2.4e-86, Sum P(4) = 2.4e-86
Identities = 65/125 (52%), Positives = 88/125 (70%)
Query: 162 SGLIAGVKGVT----KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI KGV KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 287 SGLIFYRKGVQAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 346
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y Q+ NA +++ +++RGY +V+GGTD HL+L+DLR L G++ E VLE ++I
Sbjct: 347 FREYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSIT 406
Query: 278 CNKNT 282
NKNT
Sbjct: 407 ANKNT 411
Score = 127 (49.8 bits), Expect = 2.4e-86, Sum P(4) = 2.4e-86
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+GT+ Y+R +DYAR R++CDE + + ADM+HISGL+A
Sbjct: 223 AGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVA 260
Score = 78 (32.5 bits), Expect = 2.4e-86, Sum P(4) = 2.4e-86
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
G+++ E+++ + KL DF++ L K+ + ++A L++ +E ++ F MPG D
Sbjct: 451 GVNIGLEVKSKT-TKLQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGFDD 503
>UNIPROTKB|Q5E9P9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9913 "Bos taurus" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] [GO:0046655 "folic acid metabolic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0006565 "L-serine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 EMBL:BT020871 EMBL:BC112563
IPI:IPI00695792 RefSeq:NP_001015553.1 UniGene:Bt.88340
ProteinModelPortal:Q5E9P9 SMR:Q5E9P9 STRING:Q5E9P9 PRIDE:Q5E9P9
Ensembl:ENSBTAT00000022732 GeneID:509002 KEGG:bta:509002 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 InParanoid:Q5E9P9
OrthoDB:EOG42Z4Q2 NextBio:20868773 Uniprot:Q5E9P9
Length = 484
Score = 372 (136.0 bits), Expect = 3.9e-86, Sum P(4) = 3.9e-86
Identities = 70/107 (65%), Positives = 85/107 (79%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
ML L D E+Y++IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG PG+
Sbjct: 21 MLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQ 80
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
RYYGG +FIDE+E++ Q+R+L+ + LD + WG NVQPYSGSPANFAV
Sbjct: 81 RYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAV 127
Score = 322 (118.4 bits), Expect = 3.9e-86, Sum P(4) = 3.9e-86
Identities = 64/117 (54%), Positives = 81/117 (69%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTG + Y+ E IN+AVFP LQGGPHNHAI +A A+ QA + EF++YQ QV
Sbjct: 272 GVRSVDPKTGRETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFRAYQRQV 331
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN L++ ++ GY VVTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 332 VANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNT 388
Score = 134 (52.2 bits), Expect = 3.9e-86, Sum P(4) = 3.9e-86
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + L N F + +GT+CYSR LDYAR R+I D+ + + ADM+
Sbjct: 171 PYKVNPDTGYINYDQLEENARLFHPRLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMA 230
Query: 160 HISGLIA-GV 168
H+SGL+A GV
Sbjct: 231 HVSGLVAAGV 240
Score = 75 (31.5 bits), Expect = 3.9e-86, Sum P(4) = 3.9e-86
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
GI L +IQ G K L +F L E+ + VAAL+ E+E ++ F +PG
Sbjct: 428 GIELTLQIQDAVGVKATLKEFMEKLAGAEEHHRAVAALRAEVESFATLFPLPG 480
>ZFIN|ZDB-GENE-071213-1 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2
(mitochondrial)" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 ZFIN:ZDB-GENE-071213-1 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
HOVERGEN:HBG002807 CTD:6472 EMBL:CABZ01098501 EMBL:CABZ01112226
EMBL:CABZ01112227 EMBL:CABZ01112228 EMBL:CABZ01112229
EMBL:CABZ01112230 EMBL:EF213101 IPI:IPI00862356
RefSeq:NP_001116846.1 UniGene:Dr.128606 SMR:A9LDD9 STRING:A9LDD9
Ensembl:ENSDART00000111064 GeneID:100144628 KEGG:dre:100144628
NextBio:20791462 Uniprot:A9LDD9
Length = 492
Score = 374 (136.7 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 68/102 (66%), Positives = 84/102 (82%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+Q DPE++ L+ KEK RQ G+ELIASENF S A LE GSCL NKYSEG PGKRYYG
Sbjct: 37 SLSQDDPEMWDLLLKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYG 96
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
G + +D+IE++ Q+R+L+AF+LDP+ WG NVQPYSGSPANFA
Sbjct: 97 GAEVVDQIELLCQKRALEAFDLDPQLWGVNVQPYSGSPANFA 138
Score = 323 (118.8 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 63/124 (50%), Positives = 88/124 (70%)
Query: 162 SGLI---AGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF 218
+GLI GV+ V K G++I+YD EEK+N +VFPSLQGGPHNHAI +A A+ QA S F
Sbjct: 276 AGLIFYRKGVRSVDKKGKEIMYDLEEKVNFSVFPSLQGGPHNHAIAGVAVALKQATSPMF 335
Query: 219 KSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278
+ Y AQV N+ ++ ++ +GY +V+GGTD HL+L+DLR + G++ E VLE ++I
Sbjct: 336 REYIAQVLKNSKAMAAALLDKGYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELVSITA 395
Query: 279 NKNT 282
NKNT
Sbjct: 396 NKNT 399
Score = 116 (45.9 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+GT+ Y+R +DY R + +C E ++ M ADM+HISGL+A
Sbjct: 212 AGTSAYARLIDYCRIKTLCSEINAYMLADMAHISGLVA 249
Score = 76 (31.8 bits), Expect = 1.1e-84, Sum P(4) = 1.1e-84
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
GI + +++ + KL DF++ L ++ + V ++A L+ +E ++ F MPG D
Sbjct: 439 GIQIGQDVKKKT-KKLSDFKSFLLEDAETVSRIADLRSRVEAFARPFPMPGFHD 491
>UNIPROTKB|E2R4L7 [details] [associations]
symbol:SHMT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:AAEX03006944 EMBL:AAEX03006943
Ensembl:ENSCAFT00000000313 NextBio:20893182 Uniprot:E2R4L7
Length = 531
Score = 378 (138.1 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 68/102 (66%), Positives = 85/102 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 93 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 152
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A
Sbjct: 153 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLA 194
Score = 324 (119.1 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 66/125 (52%), Positives = 89/125 (71%)
Query: 162 SGLI---AGVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI G++ V KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 332 SGLIFYRKGMRAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPT 391
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y QV NA ++D +++RGY +V+GGTD HL+L+DLR L G++ E VLE ++I
Sbjct: 392 FREYALQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSIT 451
Query: 278 CNKNT 282
NKNT
Sbjct: 452 ANKNT 456
Score = 130 (50.8 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + + AL R + +GT+ Y+R +DYAR R++CDE + + ADM+
Sbjct: 239 PYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMA 298
Query: 160 HISGLIA 166
HISGL+A
Sbjct: 299 HISGLVA 305
>ZFIN|ZDB-GENE-040426-1558 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1
(soluble)" species:7955 "Danio rerio" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
ZFIN:ZDB-GENE-040426-1558 GO:GO:0005829 GO:GO:0005634 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 GeneTree:ENSGT00390000002762
EMBL:BX649440 IPI:IPI00994921 Ensembl:ENSDART00000124883
Bgee:F1QY03 Uniprot:F1QY03
Length = 504
Score = 390 (142.3 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 72/111 (64%), Positives = 88/111 (79%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S + M+ L+ DPE++ +IKKEK RQ G+ELIASENFTS AVLE LGSC+ NKYSEG
Sbjct: 39 SHNKMMLEPLSTNDPEVFDIIKKEKKRQTYGLELIASENFTSRAVLEALGSCMNNKYSEG 98
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG + +DE+E + Q R+LK + LDPE+WG NVQPYSGSPANFAV
Sbjct: 99 YPGQRYYGGTEHVDELERLCQDRALKVYGLDPEKWGVNVQPYSGSPANFAV 149
Score = 329 (120.9 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 67/119 (56%), Positives = 83/119 (69%)
Query: 167 GVKGV-TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTG++ +Y+ E IN AVFP LQGGPHNHAI +A A+ QA + EFK+YQ QV
Sbjct: 290 GVRSVDAKTGKETMYNLESLINQAVFPGLQGGPHNHAIAGVAVALKQALTPEFKTYQLQV 349
Query: 226 KANASHLSDEMIKRGYHVVT--GGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN L+ ++ +GY VVT GG+D HLIL+DLR N G + E VLE AIACNKNT
Sbjct: 350 LANCKALASALMDKGYKVVTDKGGSDNHLILVDLRSNGTDGGRAEKVLEACAIACNKNT 408
Score = 140 (54.3 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + L N F + +GT+CYSR LDY+R R+I DE + + ADM+
Sbjct: 189 PYKVNPETGYIDYNRLEENARLFHPRLIIAGTSCYSRNLDYSRLRKIADENGAYLLADMA 248
Query: 160 HISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQG 196
HISGL+A GV + ++Y + ++ +L+G
Sbjct: 249 HISGLVAA--GVVPSP----FEYCDVVSTTTHKTLRG 279
Score = 100 (40.3 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQADL 337
GI L EIQ PK L +F+ L +NE K+ ++KE+ED++ +F MPG +L
Sbjct: 448 GIVLTLEIQKNMNPKATLKEFKEELAQNEKYQLKIKEIRKEVEDFAGKFPMPGLPEL 504
>DICTYBASE|DDB_G0291652 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2"
species:44689 "Dictyostelium discoideum" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;ISS] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0291652 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005759
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:DYLIDMD
HSSP:P34897 ProtClustDB:PTZ00094 RefSeq:XP_635129.1
ProteinModelPortal:Q54EW1 SMR:Q54EW1 STRING:Q54EW1 PRIDE:Q54EW1
EnsemblProtists:DDB0230073 GeneID:8628075 KEGG:ddi:DDB_G0291652
Uniprot:Q54EW1
Length = 481
Score = 367 (134.2 bits), Expect = 1.8e-77, Sum P(4) = 1.8e-77
Identities = 64/102 (62%), Positives = 85/102 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+++++DPE+Y L+ KEK RQ G+ELIASENFTS AV+E +GSC NKY+EGLPG RYYG
Sbjct: 33 SVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYG 92
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
GN+ +D++E + +R+L+ FNL+PE+WG NVQPYSGS ANFA
Sbjct: 93 GNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFA 134
Score = 261 (96.9 bits), Expect = 1.8e-77, Sum P(4) = 1.8e-77
Identities = 51/101 (50%), Positives = 67/101 (66%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
D E +IN AVFPS QGGPH + I IA A+ +A S +F+ Y QV+ N+ + +E+ KRG
Sbjct: 292 DLENRINFAVFPSCQGGPHENTIAGIAVALKEASSPDFQEYTKQVRRNSQTMGEELKKRG 351
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
Y +VT GTD HL+L DLR +TGSK+E +E I NKN
Sbjct: 352 YSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKN 392
Score = 106 (42.4 bits), Expect = 1.8e-77, Sum P(4) = 1.8e-77
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 102 PYSGSPANFAVCEKALPTNNARF--DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY + + K + N A F L +G + Y R DY R R+I D+ + + DM+
Sbjct: 179 PYQVNETGYVDYNK-MEANAALFRPKLLIAGASAYPREWDYERMRKIADKHGAYLLCDMA 237
Query: 160 HISGLIAGVKGVT 172
HISG++AG + ++
Sbjct: 238 HISGMVAGKQAIS 250
Score = 86 (35.3 bits), Expect = 1.8e-77, Sum P(4) = 1.8e-77
Identities = 16/51 (31%), Positives = 35/51 (68%)
Query: 284 ISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQ 334
+ ++ +IQ+ G K+ DFQ + N+D+ K++ ++E++++S +F MPG+
Sbjct: 434 VKISLDIQSKVGKKMPDFQRAIADNQDL-KQI---RQEVKEFSTKFGMPGE 480
>TAIR|locus:2127806 [details] [associations]
symbol:SHM3 "serine hydroxymethyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0009570
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP002687 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:SKELTGW IPI:IPI00529123 RefSeq:NP_001119098.1
RefSeq:NP_567895.1 UniGene:At.27717 ProteinModelPortal:F4JUC7
SMR:F4JUC7 PRIDE:F4JUC7 EnsemblPlants:AT4G32520.1
EnsemblPlants:AT4G32520.2 GeneID:829387 KEGG:ath:AT4G32520
Uniprot:F4JUC7
Length = 529
Score = 369 (135.0 bits), Expect = 7.7e-77, Sum P(4) = 7.7e-77
Identities = 68/102 (66%), Positives = 82/102 (80%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L + DPE+ ++I KEK RQ +ELIASENFTS AV+E +GSCL NKYSEGLPGKRYYGG
Sbjct: 83 LGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
N++ID++E + Q R+L AF LD +WG NVQP SGSPANFAV
Sbjct: 143 NEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAV 184
Score = 275 (101.9 bits), Expect = 7.7e-77, Sum P(4) = 7.7e-77
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
D E +NNAVFP LQGGPHNH IG +A + AQS EFK+YQ +V +N L++ +++ G
Sbjct: 335 DLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELG 394
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+ +V+GG+D HL+L+DLR + G++VE +L+ +I NKN+
Sbjct: 395 FKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKNS 436
Score = 100 (40.3 bits), Expect = 7.7e-77, Sum P(4) = 7.7e-77
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + YSR DY R R+I D + + DM+HISGL+A
Sbjct: 257 AGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVA 294
Score = 70 (29.7 bits), Expect = 7.7e-77, Sum P(4) = 7.7e-77
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 283 GISLAAEIQ-AISGPKLVDFQTCLHKNEDIVK-KVAALKKEIEDYSNQFEMPG 333
G+ + E + A G KL DF + E +K +V +LK+ +E ++++F +PG
Sbjct: 476 GVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528
>SGD|S000000467 [details] [associations]
symbol:SHM1 "Mitochondrial serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;IGI;IMP] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IGI] [GO:0016740 "transferase
activity" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000000467
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:BK006936 EMBL:X70529
EMBL:Z36131 GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
OrthoDB:EOG4V1B88 GO:GO:0009070 EMBL:L22528 PIR:S29348
RefSeq:NP_009822.4 RefSeq:NP_009827.3 ProteinModelPortal:P37292
SMR:P37292 DIP:DIP-4952N IntAct:P37292 MINT:MINT-548725
STRING:P37292 PaxDb:P37292 PeptideAtlas:P37292 PRIDE:P37292
EnsemblFungi:YBR263W GeneID:852565 GeneID:852571 KEGG:sce:YBR263W
KEGG:sce:YBR268W CYGD:YBR263w OMA:GFNENDV
BioCyc:MetaCyc:YBR263W-MONOMER NextBio:971682 Genevestigator:P37292
GermOnline:YBR263W Uniprot:P37292
Length = 490
Score = 322 (118.4 bits), Expect = 6.8e-75, Sum P(4) = 6.8e-75
Identities = 58/110 (52%), Positives = 84/110 (76%)
Query: 3 SSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGL 62
+ +++ +++ DPE++ ++++E+HRQ + I LI SENFTS AV++ LGS LQNKYSEG
Sbjct: 25 AQSLVSKPVSEGDPEMFDILQQERHRQKHSITLIPSENFTSKAVMDLLGSELQNKYSEGY 84
Query: 63 PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGGN+ ID+ E + Q R+L+ + LDP +WG NVQP SG+PAN V
Sbjct: 85 PGERYYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYV 134
Score = 321 (118.1 bits), Expect = 6.8e-75, Sum P(4) = 6.8e-75
Identities = 61/116 (52%), Positives = 83/116 (71%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
G+K VTK G++I Y+ E+KIN +VFP QGGPHNH IGA+A A+ QA S EFK YQ ++
Sbjct: 280 GIKSVTKKGKEIPYELEKKINFSVFPGHQGGPHNHTIGAMAVALKQAMSPEFKEYQQKIV 339
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
N+ + E+ K GY +V+GGTD HLI+IDL ++ G++VE +L + IA NKNT
Sbjct: 340 DNSKWFAQELTKMGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNT 395
Score = 109 (43.4 bits), Expect = 6.8e-75, Sum P(4) = 6.8e-75
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+GT+ YSR +DYARF++I + + +DM+HISGL+A
Sbjct: 208 AGTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVA 245
Score = 51 (23.0 bits), Expect = 6.8e-75, Sum P(4) = 6.8e-75
Identities = 16/66 (24%), Positives = 35/66 (53%)
Query: 272 EEIA-IACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKK---VAALKKEIEDYSN 327
EE + +A ++ + LA ++ + +D ++ L++ + + + VAAL EI +
Sbjct: 423 EEFSQVAKYIDSAVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVAALSGEISKWVG 482
Query: 328 QFEMPG 333
Q+ +PG
Sbjct: 483 QYPVPG 488
>UNIPROTKB|G4NDG3 [details] [associations]
symbol:MGG_00923 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CM001235 GO:GO:0008168
GO:GO:0043581 GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003718036.1
ProteinModelPortal:G4NDG3 SMR:G4NDG3 EnsemblFungi:MGG_00923T0
GeneID:2674480 KEGG:mgr:MGG_00923 Uniprot:G4NDG3
Length = 482
Score = 321 (118.1 bits), Expect = 2.7e-74, Sum P(4) = 2.7e-74
Identities = 64/113 (56%), Positives = 80/113 (70%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
ML +L +DPE+ ++K E RQ I LIASEN TS AV + LGS + NKYSEG PGK
Sbjct: 15 MLEKSLLDSDPEVAEIMKHEIQRQRESIILIASENVTSRAVFDALGSPMSNKYSEGYPGK 74
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP 118
RYYGGNQ IDEIE++ Q+R+L AFN+ ++WG NVQ SGSPAN V + +P
Sbjct: 75 RYYGGNQHIDEIELLCQRRALAAFNVTEDKWGVNVQCLSGSPANLQVYQAIMP 127
Score = 315 (115.9 bits), Expect = 2.7e-74, Sum P(4) = 2.7e-74
Identities = 62/117 (52%), Positives = 84/117 (71%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTG++ +YD EE IN +VFP QGGPHNH I A+A A+ QA + EFK+YQ QV
Sbjct: 266 GVRSVDPKTGKETMYDLEEPINFSVFPGHQGGPHNHTITALAVALKQASTPEFKAYQQQV 325
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
NA L + + G+ +V+ GTD H++L+DLR + L G++VE VLE+I IACNKN+
Sbjct: 326 VDNAKALENSFKELGHKLVSDGTDSHMVLVDLRAHSLDGARVEAVLEQINIACNKNS 382
Score = 104 (41.7 bits), Expect = 2.7e-74, Sum P(4) = 2.7e-74
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 127 LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GV 168
L +GT+ Y R +DYAR R+I D + + D++HISGL+A GV
Sbjct: 192 LVAGTSAYCRLIDYARMRKIADLVGAYLVVDIAHISGLVASGV 234
Score = 55 (24.4 bits), Expect = 2.7e-74, Sum P(4) = 2.7e-74
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 284 ISLAAEIQAI---SGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMP 332
I + ++QA KL DF+ + E V ++ LKKEI + F +P
Sbjct: 423 IKICKDVQAALPKEANKLKDFKAKVASGE--VSRINELKKEIASWCQTFPLP 472
>ASPGD|ASPL0000008876 [details] [associations]
symbol:AN10745 species:162425 "Emericella nidulans"
[GO:0006544 "glycine metabolic process" evidence=IEA] [GO:0006563
"L-serine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001301 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:LELTHQF ProteinModelPortal:C8V028
EnsemblFungi:CADANIAT00007210 Uniprot:C8V028
Length = 600
Score = 347 (127.2 bits), Expect = 2.3e-73, Sum P(4) = 2.3e-73
Identities = 67/117 (57%), Positives = 84/117 (71%)
Query: 5 TMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPG 64
++L L Q DP +Y++++KEK RQ + I LI SENFTS AVL+ LGS +QNKYSEG PG
Sbjct: 124 SLLTAPLEQADPSVYNILQKEKKRQQHFINLIPSENFTSQAVLDALGSVMQNKYSEGYPG 183
Query: 65 KRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
RYYGGN+ IDE E + QQR+L+ F L PE+WG NVQP SGSPAN L T++
Sbjct: 184 ARYYGGNEHIDEAERLCQQRALETFRLSPEEWGVNVQPLSGSPANLYAISALLNTHD 240
Score = 286 (105.7 bits), Expect = 2.3e-73, Sum P(4) = 2.3e-73
Identities = 59/122 (48%), Positives = 80/122 (65%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
G++ K G + +YD E IN +VFP QGGPHNH I A+A A+ QAQS EFK+YQ V
Sbjct: 376 GIRRTDKKGNQEMYDLEGPINASVFPGHQGGPHNHTITALAVALQQAQSTEFKTYQETVL 435
Query: 227 ANASHLSDEMIKR------GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280
ANA L++ + GY++V+GGTD HL+L+DL+ + G++VE VLE +A NK
Sbjct: 436 ANAKSLAERLGGSTSSGGLGYNIVSGGTDNHLVLVDLKNRGVDGARVERVLELCGVASNK 495
Query: 281 NT 282
NT
Sbjct: 496 NT 497
Score = 115 (45.5 bits), Expect = 2.3e-73, Sum P(4) = 2.3e-73
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GV 168
+GT+ YSR +DY R RQI D + + +DM+HISGL+A GV
Sbjct: 304 AGTSAYSRLIDYPRMRQIADNAGAYLMSDMAHISGLVAAGV 344
Score = 55 (24.4 bits), Expect = 2.3e-73, Sum P(4) = 2.3e-73
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 268 ELVLEEIAIACNKNTGISLAAEIQAISGPKLVD-FQTCLHKNEDIVKKVAALKKEIEDYS 326
++V + I + +A + + P V F + E+I ++ L++E+ED++
Sbjct: 532 DIVDRAVTITQKLDKSAKESAASKGVKNPNTVKAFLEYVGNGEEI-SEIVQLRQEVEDWA 590
Query: 327 NQFEMP 332
F +P
Sbjct: 591 GTFNLP 596
>UNIPROTKB|G4MRB4 [details] [associations]
symbol:MGG_13781 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:CM001231 GO:GO:0006544 GO:GO:0035999 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003710851.1
ProteinModelPortal:G4MRB4 SMR:G4MRB4 EnsemblFungi:MGG_13781T0
GeneID:5049001 KEGG:mgr:MGG_13781 Uniprot:G4MRB4
Length = 516
Score = 329 (120.9 bits), Expect = 1.9e-72, Sum P(4) = 1.9e-72
Identities = 64/111 (57%), Positives = 79/111 (71%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S +L L DP +Y +++KEK RQ + I LI SENFTS AVL+ LGS +QNKYSEG
Sbjct: 34 SQQRLLSSHLQTADPAMYDIVEKEKQRQKHYINLIPSENFTSQAVLDALGSPMQNKYSEG 93
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG RYYGGN+FID+ E + QQR+L+ F LD +QWG NVQ SG+PAN V
Sbjct: 94 YPGARYYGGNEFIDQSERLCQQRALETFGLDDKQWGVNVQALSGAPANLYV 144
Score = 276 (102.2 bits), Expect = 1.9e-72, Sum P(4) = 1.9e-72
Identities = 58/124 (46%), Positives = 78/124 (62%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ KT +++YD E IN +VFP QGGPHNH I A+A A+ QAQ EF++YQ QV
Sbjct: 289 GVRSTNPKTKAEVMYDLENPINQSVFPGHQGGPHNHTIAALAVALKQAQMPEFRAYQEQV 348
Query: 226 KANASHLSDEMIKR-------GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278
NA + + + GY +V+GGTD HL+L DL+ + G++VE VLE + IA
Sbjct: 349 LVNAKAFARRLGEAKGNGGGLGYKIVSGGTDNHLVLADLKPQGIDGARVERVLELVGIAA 408
Query: 279 NKNT 282
NKNT
Sbjct: 409 NKNT 412
Score = 126 (49.4 bits), Expect = 1.9e-72, Sum P(4) = 1.9e-72
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+GT+ YSR +DY R R+ICD+ ++ M ADM+HISG++A
Sbjct: 217 AGTSAYSRFIDYKRMREICDKVNAYMLADMAHISGMVA 254
Score = 53 (23.7 bits), Expect = 1.9e-72, Sum P(4) = 1.9e-72
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 268 ELVLEEIAIACNKNTGISLAAEIQAISGP-KLVDFQTCLHKNEDIVKKVAALKKEIEDYS 326
++V + IA + AAE + P KL +F L N + ++ L+ E+ D+
Sbjct: 447 DIVDRAVTIAVRVDKAARKAAEAKGEKSPGKLKNFLEYLG-NGETESEIVQLRSEVSDWV 505
Query: 327 NQFEMP 332
+ +P
Sbjct: 506 GTYPLP 511
>TAIR|locus:2005518 [details] [associations]
symbol:SHM1 "serine transhydroxymethyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;TAS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=IMP]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=TAS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0046686 "response to cadmium
ion" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
[GO:0010319 "stromule" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009853 "photorespiration" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009814 "defense response, incompatible
interaction" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005886
GO:GO:0005634 GO:GO:0046686 GO:GO:0009570 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161592 GO:GO:0008266 GO:GO:0005759 GO:GO:0048046
GO:GO:0009409 GO:GO:0009626 EMBL:AL035538 GO:GO:0009853
GO:GO:0009534 GO:GO:0022626 GO:GO:0010319 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 EMBL:AJ271726
EMBL:AY054254 EMBL:AY057645 EMBL:AY070726 EMBL:AF428388
EMBL:BT006353 IPI:IPI00525727 PIR:T05620 RefSeq:NP_195506.1
UniGene:At.21766 ProteinModelPortal:Q9SZJ5 SMR:Q9SZJ5 IntAct:Q9SZJ5
STRING:Q9SZJ5 PaxDb:Q9SZJ5 PRIDE:Q9SZJ5 ProMEX:Q9SZJ5
EnsemblPlants:AT4G37930.1 GeneID:829949 KEGG:ath:AT4G37930
TAIR:At4g37930 InParanoid:Q9SZJ5 PhylomeDB:Q9SZJ5
ProtClustDB:PLN03226 BioCyc:MetaCyc:AT4G37930-MONOMER
Genevestigator:Q9SZJ5 GermOnline:AT4G37930 Uniprot:Q9SZJ5
Length = 517
Score = 343 (125.8 bits), Expect = 7.6e-72, Sum P(3) = 7.6e-72
Identities = 63/106 (59%), Positives = 82/106 (77%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ L + DPE+ +I+ EK RQ G+ELI SENFTS++V++ +GS + NKYSEG PG R
Sbjct: 51 LNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 110
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
YYGGN++ID E + Q+R+L+AF LDPE+WG NVQP SGSPANF V
Sbjct: 111 YYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHV 156
Score = 341 (125.1 bits), Expect = 7.6e-72, Sum P(3) = 7.6e-72
Identities = 61/116 (52%), Positives = 88/116 (75%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
GVK + K G+++LYD+E+KIN AVFP LQGGPHNH I +A A+ QA + E+K+YQ QV
Sbjct: 301 GVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVL 360
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+N++ + +++RGY +V+GGTD HL+L++L+ + GS+VE VLE + IA NKNT
Sbjct: 361 SNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNT 416
Score = 123 (48.4 bits), Expect = 4.9e-49, Sum P(3) = 4.9e-49
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINN 188
+G + Y+R DYAR R++C++ ++M ADM+HISGL+A V + +DY + +
Sbjct: 229 AGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAA--NVIPSP----FDYADVVTT 282
Query: 189 AVFPSLQG 196
SL+G
Sbjct: 283 TTHKSLRG 290
Score = 79 (32.9 bits), Expect = 7.6e-72, Sum P(3) = 7.6e-72
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 267 VELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYS 326
VE ++A +K I+L + +A G KL DF + + + I ++A L+ E+E+++
Sbjct: 442 VEEDFAKVAEYFDKAVTIALKVKSEA-QGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFA 500
Query: 327 NQFEMPG 333
QF G
Sbjct: 501 KQFPTIG 507
>TAIR|locus:2129251 [details] [associations]
symbol:SHM4 "serine hydroxymethyltransferase 4"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS;IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0046686 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97335 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 EMBL:AL161537 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:LKEVASP HSSP:P07511 ProtClustDB:PLN03226 EMBL:AF361589
EMBL:AY093987 IPI:IPI00532971 PIR:B71400 RefSeq:NP_193129.1
UniGene:At.23373 ProteinModelPortal:O23254 SMR:O23254 STRING:O23254
PaxDb:O23254 PRIDE:O23254 ProMEX:O23254 EnsemblPlants:AT4G13930.1
GeneID:827027 KEGG:ath:AT4G13930 TAIR:At4g13930 InParanoid:O23254
PhylomeDB:O23254 Genevestigator:O23254 Uniprot:O23254
Length = 471
Score = 386 (140.9 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 87/179 (48%), Positives = 107/179 (59%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L DPE++ LI+KEK RQ GIELIASENFTS AV+E LGS L NKYSEG+PG RYYG
Sbjct: 11 SLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRYYG 70
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNA--RFDFL 127
GN+FIDEIE + + R+L+AF+ DP WG NVQPYSGSPANFA L ++ D
Sbjct: 71 GNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLP 130
Query: 128 SSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKI 186
S G + Y + T SI F + + G K EK L D+ K+
Sbjct: 131 SGGHLTHGY---YTSGGKKISAT-SIYFESLPYKVNFTTGYIDYDKLEEKAL-DFRPKL 184
Score = 294 (108.6 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 64/124 (51%), Positives = 84/124 (67%)
Query: 162 SGLIAGVKGVT--KTG--EKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
+G+I KG K G E +YD+E+KIN AVFP+LQGGPHNH IGA+A A+ QA +
Sbjct: 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANTPG 310
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
FK Y QVKANA L + ++ +GY +VT GT+ HL+L DLR LTG+KVE + + +I
Sbjct: 311 FKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSIT 370
Query: 278 CNKN 281
NKN
Sbjct: 371 LNKN 374
Score = 111 (44.1 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 114 EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTK 173
EKAL + R L G + Y R DYARFR I D+ +++ DM+HISGL+A +
Sbjct: 175 EKAL---DFRPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANP 231
Query: 174 TGEKILYDYEEKINNAVFPSLQG 196
++Y + + SL+G
Sbjct: 232 ------FEYCDVVTTTTHKSLRG 248
Score = 75 (31.5 bits), Expect = 1.4e-71, Sum P(3) = 1.4e-71
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 267 VELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYS 326
VE E+I ++ ++L +IQ G L DF L N+D+ + LK ++E +S
Sbjct: 401 VEKDFEQIGEFLSR--AVTLTLDIQKTYGKLLKDFNKGLVNNKDLDQ----LKADVEKFS 454
Query: 327 NQFEMPG 333
+EMPG
Sbjct: 455 ASYEMPG 461
>TAIR|locus:2119545 [details] [associations]
symbol:EDA36 "EMBRYO SAC DEVELOPMENT ARREST 37"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009555 GO:GO:0008168
GO:GO:0006544 GO:GO:0010197 GO:GO:0035999 EMBL:AL035528
EMBL:AL161537 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN03226 IPI:IPI00536506 PIR:T05258 RefSeq:NP_193125.1
UniGene:At.33326 ProteinModelPortal:Q9SVM4 SMR:Q9SVM4 STRING:Q9SVM4
EnsemblPlants:AT4G13890.1 GeneID:827024 KEGG:ath:AT4G13890
TAIR:At4g13890 InParanoid:Q9SVM4 OMA:MAHNSAL PhylomeDB:Q9SVM4
ArrayExpress:Q9SVM4 Genevestigator:Q9SVM4 Uniprot:Q9SVM4
Length = 470
Score = 399 (145.5 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 72/97 (74%), Positives = 85/97 (87%)
Query: 15 DPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI 74
DPE+Y LI+KEKHRQ GIELIA+ENFTS+AV+E LGSCL NKYSEG+PG RYYGG +FI
Sbjct: 16 DPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFI 75
Query: 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
DEIE + + RSL+AF+ +PE+WG NVQPYSGSPANFA
Sbjct: 76 DEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFA 112
Score = 281 (104.0 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 64/124 (51%), Positives = 82/124 (66%)
Query: 162 SGLIAGVKGV--TKTG--EKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
+G+I KG K G E +YD++ KIN+AVFP+LQ GPHN+ IGA+A A+ Q +
Sbjct: 251 AGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPS 310
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
FK Y QVKANA+ L+ +I +GY +VT GTD HLIL DLR LTG+KVE V E I
Sbjct: 311 FKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYIT 370
Query: 278 CNKN 281
N+N
Sbjct: 371 LNRN 374
Score = 93 (37.8 bits), Expect = 7.3e-51, Sum P(3) = 7.3e-51
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 114 EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTK 173
EKA+ + R + G T Y R DYARFR + D+ + + DM+H S L+A +
Sbjct: 175 EKAM---DFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADP 231
Query: 174 TGEKILYDYEEKINNAVFPSLQG 196
++Y + + + SL+G
Sbjct: 232 ------FEYCDVVTTSTHKSLRG 248
Score = 65 (27.9 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 284 ISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
+++ +IQ G + DF L N K++ +K ++E+++ F+MPG
Sbjct: 416 VTITLDIQEQYGKVMKDFNKGLVNN----KEIDEIKADVEEFTYDFDMPG 461
>GENEDB_PFALCIPARUM|PFL1720w [details] [associations]
symbol:PFL1720w "Serine
hydroxymethyltransferase" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006730
"one-carbon metabolic process" evidence=TAS] HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00464 PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 312 (114.9 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 59/99 (59%), Positives = 75/99 (75%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L + D EL+ L++KEK+RQI I LIASEN T+ AV ECLG + NKYSEG P KRYYGG
Sbjct: 7 LQKYDKELFDLLEKEKNRQIETINLIASENLTNTAVRECLGDRISNKYSEGYPHKRYYGG 66
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109
N ++D+IE + +R+L+AFN+ E+WG NVQP SGS AN
Sbjct: 67 NDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSAAN 105
Score = 248 (92.4 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 49/112 (43%), Positives = 74/112 (66%)
Query: 183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH 242
++KIN++VFPS QGGPHN+ I A+A + + + FK Y QV N+ L++ ++KR
Sbjct: 258 DQKINSSVFPSFQGGPHNNKIAAVACQLKEVNTPFFKEYTKQVLLNSKALAECLLKRNLD 317
Query: 243 VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAIS 294
+VT GTD HLI++DLRK +TGSK++ I IA NKNT + +++ +S
Sbjct: 318 LVTNGTDNHLIVVDLRKYNITGSKLQETCNAINIALNKNT---IPSDVDCVS 366
Score = 112 (44.5 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
G T Y R +DY FR+ICDE ++ +FAD+SHIS +A
Sbjct: 181 GYTSYPRDIDYKGFREICDEVNAYLFADISHISSFVA 217
Score = 56 (24.8 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 284 ISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYS 326
I L E+Q G KLVDF+ L N K+ LKKE+ ++
Sbjct: 398 ILLTDELQQKYGKKLVDFKKGLVNNP----KIDELKKEVVQWA 436
>UNIPROTKB|Q8I566 [details] [associations]
symbol:PFL1720w "Serine hydroxymethyltransferase"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006730 "one-carbon metabolic
process" evidence=TAS] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 312 (114.9 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 59/99 (59%), Positives = 75/99 (75%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L + D EL+ L++KEK+RQI I LIASEN T+ AV ECLG + NKYSEG P KRYYGG
Sbjct: 7 LQKYDKELFDLLEKEKNRQIETINLIASENLTNTAVRECLGDRISNKYSEGYPHKRYYGG 66
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109
N ++D+IE + +R+L+AFN+ E+WG NVQP SGS AN
Sbjct: 67 NDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSAAN 105
Score = 248 (92.4 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 49/112 (43%), Positives = 74/112 (66%)
Query: 183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH 242
++KIN++VFPS QGGPHN+ I A+A + + + FK Y QV N+ L++ ++KR
Sbjct: 258 DQKINSSVFPSFQGGPHNNKIAAVACQLKEVNTPFFKEYTKQVLLNSKALAECLLKRNLD 317
Query: 243 VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAIS 294
+VT GTD HLI++DLRK +TGSK++ I IA NKNT + +++ +S
Sbjct: 318 LVTNGTDNHLIVVDLRKYNITGSKLQETCNAINIALNKNT---IPSDVDCVS 366
Score = 112 (44.5 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
G T Y R +DY FR+ICDE ++ +FAD+SHIS +A
Sbjct: 181 GYTSYPRDIDYKGFREICDEVNAYLFADISHISSFVA 217
Score = 56 (24.8 bits), Expect = 7.2e-68, Sum P(4) = 7.2e-68
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 284 ISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYS 326
I L E+Q G KLVDF+ L N K+ LKKE+ ++
Sbjct: 398 ILLTDELQQKYGKKLVDFKKGLVNNP----KIDELKKEVVQWA 436
>TAIR|locus:2030581 [details] [associations]
symbol:SHM6 "serine hydroxymethyltransferase 6"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0006544
"glycine metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:AC069252 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN02271 EMBL:AY125514 EMBL:BT004532 IPI:IPI00534805
RefSeq:NP_173621.1 UniGene:At.41627 ProteinModelPortal:Q9LM59
SMR:Q9LM59 STRING:Q9LM59 PaxDb:Q9LM59 PRIDE:Q9LM59
EnsemblPlants:AT1G22020.1 GeneID:838807 KEGG:ath:AT1G22020
TAIR:At1g22020 InParanoid:Q9LM59 OMA:IFGAIGK PhylomeDB:Q9LM59
Genevestigator:Q9LM59 Uniprot:Q9LM59
Length = 599
Score = 342 (125.4 bits), Expect = 4.8e-67, Sum P(4) = 4.8e-67
Identities = 64/103 (62%), Positives = 81/103 (78%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
++ + DPE++ ++KEK RQ GIELIASENF AV+E LGS L NKYSEG+PG RYY
Sbjct: 141 SIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYT 200
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
GNQ+ID+IEI+ Q+R+L AF L+ E+WG NVQPYS + ANFAV
Sbjct: 201 GNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAV 243
Score = 258 (95.9 bits), Expect = 4.8e-67, Sum P(4) = 4.8e-67
Identities = 56/103 (54%), Positives = 67/103 (65%)
Query: 178 ILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237
I YD+EEKIN +VFPSLQGGPHN+ I A+A A+ QA S E+K Y QVK NA L+ +I
Sbjct: 406 IQYDFEEKINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKALASALI 465
Query: 238 KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280
R ++TGGTD HL+L DL LTG E V E I NK
Sbjct: 466 SRKCKLITGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNK 508
Score = 92 (37.4 bits), Expect = 4.8e-67, Sum P(4) = 4.8e-67
Identities = 30/103 (29%), Positives = 49/103 (47%)
Query: 94 EQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSI 153
E + V P +G + EKAL + R L G + Y R ++ RFR I D+ ++
Sbjct: 285 ESFPYKVDPRTGYIDYDKLEEKAL---DYRPKILICGGSSYPRDWEFPRFRHIADKCGAV 341
Query: 154 MFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQG 196
+ DM+ ISGL+A + +DY + + + SL+G
Sbjct: 342 LMFDMAQISGLVAAKESPNP------FDYCDIVTSTTHKSLRG 378
Score = 51 (23.0 bits), Expect = 4.8e-67, Sum P(4) = 4.8e-67
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 313 KKVAALKKEIEDYSNQFEMP 332
K++A L+ ++E ++ QF MP
Sbjct: 576 KEIADLRNQVEAFATQFAMP 595
>TAIR|locus:2148463 [details] [associations]
symbol:SHM2 "serine hydroxymethyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine metabolic
process" evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
EMBL:CP002688 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008270 GO:GO:0050897
GO:GO:0005747 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:ERFRAIC HSSP:P07511
ProtClustDB:PLN03226 EMBL:BT001097 EMBL:BT001113 IPI:IPI00525834
RefSeq:NP_568488.2 RefSeq:NP_851081.1 UniGene:At.22652
ProteinModelPortal:Q8GRI1 STRING:Q8GRI1 PaxDb:Q8GRI1 PRIDE:Q8GRI1
EnsemblPlants:AT5G26780.2 EnsemblPlants:AT5G26780.3 GeneID:832736
KEGG:ath:AT5G26780 TAIR:At5g26780 InParanoid:Q8GRI1
PhylomeDB:Q8GRI1 Genevestigator:Q8GRI1 Uniprot:Q8GRI1
Length = 533
Score = 330 (121.2 bits), Expect = 3.9e-65, Sum P(3) = 3.9e-65
Identities = 62/106 (58%), Positives = 80/106 (75%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ +L + DPE+ +I+ EK RQ G ELI SENFTSL+V++ +GS + NKYSEG PG R
Sbjct: 51 LNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 110
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
YYGGN++ID E + Q+R+L+AF LDP +WG NVQ SGSPANF V
Sbjct: 111 YYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQV 156
Score = 295 (108.9 bits), Expect = 3.9e-65, Sum P(3) = 3.9e-65
Identities = 59/132 (44%), Positives = 87/132 (65%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
G+K + K G++++YDYE++IN AVFP LQGGPHNH I +A A+ QA++ E+K+YQ QV
Sbjct: 301 GLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVL 360
Query: 227 ANASHLSD----------------EMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
N S ++ ++ +GY +V+GGTD HL+L++L+ + GS+VE V
Sbjct: 361 RNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKV 420
Query: 271 LEEIAIACNKNT 282
LE + IA NKNT
Sbjct: 421 LELVHIAANKNT 432
Score = 125 (49.1 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINN 188
+G + Y+R DYAR R++C++ ++M ADM+HISGL+A GV + ++Y + +
Sbjct: 229 AGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAA--GVIPSP----FEYADVVTT 282
Query: 189 AVFPSLQG 196
SL+G
Sbjct: 283 TTHKSLRG 290
Score = 80 (33.2 bits), Expect = 3.9e-65, Sum P(3) = 3.9e-65
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 284 ISLAAEIQAIS-GPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
+ +A +I+A S G KL DF + NE + +++ L++ +E+Y+ QF G
Sbjct: 473 VKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTIG 523
>CGD|CAL0003822 [details] [associations]
symbol:SHM1 species:5476 "Candida albicans" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006544 "glycine metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IEA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 328 (120.5 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 60/108 (55%), Positives = 81/108 (75%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S+ ++ ++ DPE+ ++ +E+ RQ N I LI SENFTS AV++ LGS +QNKYSEG
Sbjct: 30 SAQALISKSVQDVDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEG 89
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109
PG+RYYGGN+ ID+ E + Q+R+L+AF LDP QWG NVQP SG+PAN
Sbjct: 90 YPGERYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPAN 137
Score = 316 (116.3 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 58/116 (50%), Positives = 80/116 (68%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
G++ VTK G++I Y+ E KIN +VFP QGGPHNH I A+A A+ Q E+ YQ +V
Sbjct: 285 GIRKVTKKGKEIPYELERKINFSVFPGHQGGPHNHTISALAVALKQCTEPEYVKYQQEVV 344
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+NA H +D ++ +G+ +V+ GTD HLIL+DLR + G++VE VLE IA NKNT
Sbjct: 345 SNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIATNKNT 400
Score = 118 (46.6 bits), Expect = 6.3e-44, Sum P(3) = 6.3e-44
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINN 188
+G + YSR +DY R RQI D+ + + +DM+HISGL++ GVT + + Y + +
Sbjct: 213 AGASAYSRVIDYKRMRQIADKVGAYLLSDMAHISGLVSA--GVTDSP----FPYSDIVTT 266
Query: 189 AVFPSLQG 196
SL+G
Sbjct: 267 TTHKSLRG 274
Score = 49 (22.3 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 284 ISLAAEIQAISGPKLV-DFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQ 334
+++A E++A K+ + K D KV L KE+ + +++ +PG+
Sbjct: 441 VNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPGE 492
Score = 39 (18.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 141 ARFRQICDETDSIMFADMSHIS 162
A F+++ DE+D + D +S
Sbjct: 461 ASFKKLADESDKVKQLDKEVVS 482
>UNIPROTKB|Q59PP7 [details] [associations]
symbol:SHM1 "Putative uncharacterized protein SHM1"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006544 "glycine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 328 (120.5 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 60/108 (55%), Positives = 81/108 (75%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S+ ++ ++ DPE+ ++ +E+ RQ N I LI SENFTS AV++ LGS +QNKYSEG
Sbjct: 30 SAQALISKSVQDVDPEMADILNQERTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEG 89
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109
PG+RYYGGN+ ID+ E + Q+R+L+AF LDP QWG NVQP SG+PAN
Sbjct: 90 YPGERYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPAN 137
Score = 316 (116.3 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 58/116 (50%), Positives = 80/116 (68%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
G++ VTK G++I Y+ E KIN +VFP QGGPHNH I A+A A+ Q E+ YQ +V
Sbjct: 285 GIRKVTKKGKEIPYELERKINFSVFPGHQGGPHNHTISALAVALKQCTEPEYVKYQQEVV 344
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+NA H +D ++ +G+ +V+ GTD HLIL+DLR + G++VE VLE IA NKNT
Sbjct: 345 SNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIATNKNT 400
Score = 118 (46.6 bits), Expect = 6.3e-44, Sum P(3) = 6.3e-44
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINN 188
+G + YSR +DY R RQI D+ + + +DM+HISGL++ GVT + + Y + +
Sbjct: 213 AGASAYSRVIDYKRMRQIADKVGAYLLSDMAHISGLVSA--GVTDSP----FPYSDIVTT 266
Query: 189 AVFPSLQG 196
SL+G
Sbjct: 267 TTHKSLRG 274
Score = 49 (22.3 bits), Expect = 1.3e-64, Sum P(3) = 1.3e-64
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 284 ISLAAEIQAISGPKLV-DFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQ 334
+++A E++A K+ + K D KV L KE+ + +++ +PG+
Sbjct: 441 VNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPGE 492
Score = 39 (18.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 141 ARFRQICDETDSIMFADMSHIS 162
A F+++ DE+D + D +S
Sbjct: 461 ASFKKLADESDKVKQLDKEVVS 482
>UNIPROTKB|Q60V73 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6238 "Caenorhabditis briggsae" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0009069 "serine family amino
acid metabolic process" evidence=TAS] [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:HE600934 HSSP:P07511
ProteinModelPortal:Q60V73 STRING:Q60V73 PRIDE:Q60V73
EnsemblMetazoa:CBG19673 WormBase:CBG19673 GO:GO:0009069
Uniprot:Q60V73
Length = 511
Score = 356 (130.4 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 69/122 (56%), Positives = 91/122 (74%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
++ +L + + DPE+++++K EK RQ G+ELIASENFTS AV++ LGS + NKYSEG
Sbjct: 47 NNENLLKDHVEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEG 106
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
PG RYYGGN+FID++EI+ Q+R+L+ F LDP +WG NVQ SGSPANFAV AL N
Sbjct: 107 YPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYT-ALVGAN 165
Query: 122 AR 123
R
Sbjct: 166 GR 167
Score = 318 (117.0 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 74/174 (42%), Positives = 98/174 (56%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
GV+ V G + LYD EEKIN+AVFP LQGGPHNH I IA A+ Q S++F Y Q+
Sbjct: 302 GVRSVNAKGVETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALKQCLSEDFVQYGEQIL 361
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT---- 282
NA L++ + K GY + TGGTD HL+L+DLR + G++ E +L+ IACNKNT
Sbjct: 362 KNAKTLAERLKKHGYSLATGGTDNHLLLVDLRPIGVEGARAEHILDLAHIACNKNTCPGD 421
Query: 283 -------GISLAAEIQAISGPKLVDFQTC---LHKNEDIVKKV-AALKKEIEDY 325
GI L G K DF+ +H+ I KK A K ++D+
Sbjct: 422 VSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDF 475
Score = 119 (46.9 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 127 LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKI 186
L +G +CY+R LDY RFR+I + + + +DM+HISGL+A G+ + ++Y + +
Sbjct: 228 LIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAA--GLIPSP----FEYSDVV 281
Query: 187 NNAVFPSLQG 196
SL+G
Sbjct: 282 TTTTHKSLRG 291
Score = 99 (39.9 bits), Expect = 1.2e-52, Sum P(3) = 1.2e-52
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQADL 337
G+ +A + A +G L DF+ NE ++VA L K +E++S +FE+PG DL
Sbjct: 457 GVQIAKKYNAEAGKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPGN-DL 510
>POMBASE|SPAC18G6.04c [details] [associations]
symbol:shm2 "serine hydroxymethyltransferase Shm2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IC] [GO:0009070 "serine family amino acid biosynthetic
process" evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC18G6.04c
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 PIR:T37918 RefSeq:NP_593668.2 STRING:Q10104
EnsemblFungi:SPAC18G6.04c.1 GeneID:2542242 OrthoDB:EOG4V1B88
NextBio:20803308 GO:GO:0009070 Uniprot:Q10104
Length = 488
Score = 343 (125.8 bits), Expect = 2.4e-64, Sum P(3) = 2.4e-64
Identities = 64/104 (61%), Positives = 81/104 (77%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
+L LA+ DP +Y +++ EK RQ I LIASENFTS AV++ LGS +QNKYSEG PG
Sbjct: 29 LLKAPLAECDPTVYKILESEKSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPGA 88
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109
RYYGGN+FID+ E + Q R+L+AF+LD E+WG NVQP+SGSPAN
Sbjct: 89 RYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPAN 132
Score = 297 (109.6 bits), Expect = 2.4e-64, Sum P(3) = 2.4e-64
Identities = 57/116 (49%), Positives = 79/116 (68%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
G + K G ILY+ E+KIN +VFP QGGPHNH I A+A A+ QA++ EF YQ V
Sbjct: 280 GTRSHDKRGNPILYELEDKINFSVFPGHQGGPHNHTITALAVALGQAKTPEFYQYQKDVL 339
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+NA +++ I RGY +V+GGTD HL+L+DL + G++VE +LE + I+ NKNT
Sbjct: 340 SNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNT 395
Score = 101 (40.6 bits), Expect = 7.2e-44, Sum P(3) = 7.2e-44
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINN 188
+G + Y+R +DY R R+I + ++ + DM+HISGL+A GV + ++Y + +
Sbjct: 208 AGASAYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAA--GVIPSP----FEYADIVTT 261
Query: 189 AVFPSLQG 196
SL+G
Sbjct: 262 TTHKSLRG 269
Score = 46 (21.3 bits), Expect = 2.4e-64, Sum P(3) = 2.4e-64
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 267 VELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYS 326
VEL+ +E+ K I+ AA + S K DF+ + ++A LKKE+ ++
Sbjct: 429 VELI-DEVVSLTKK---INEAALKEGKS--KFRDFKAYVGDGSKF-SEIAKLKKEVITWA 481
Query: 327 NQFEMP 332
+F+ P
Sbjct: 482 GKFDFP 487
>WB|WBGene00003214 [details] [associations]
symbol:mel-32 species:6239 "Caenorhabditis elegans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 360 (131.8 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 68/122 (55%), Positives = 92/122 (75%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
++ +L + + DPE++ ++K EK RQ G+ELIASENFTS AV++ LGS + NKYSEG
Sbjct: 43 NNENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEG 102
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
PG RYYGGN+FID++E++ Q+R+L+ F LDP +WG NVQP SGSPANFAV A+ +N
Sbjct: 103 YPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYT-AIVGSN 161
Query: 122 AR 123
R
Sbjct: 162 GR 163
Score = 313 (115.2 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 75/176 (42%), Positives = 97/176 (55%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
GV+ G LYD EEKIN+AVFP LQGGPHNH I IA A+ Q S++F Y QV
Sbjct: 298 GVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVL 357
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT---- 282
NA L++ M K GY + TGGTD HL+L+DLR + G++ E VL+ IACNKNT
Sbjct: 358 KNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGD 417
Query: 283 -------GISLAAEIQAISGPKLVDFQTC---LHKNEDIVKKV-AALKKEIEDYSN 327
GI L G + DF+ +H+ I KK A K ++D+ +
Sbjct: 418 VSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKS 473
Score = 122 (48.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 102 PYSGSPANFAVCEKALPTNNARF--DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY P + L N F + +G +CY+R LDY RFR+I + + + +DM+
Sbjct: 197 PYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATKAGAYLMSDMA 256
Query: 160 HISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQG 196
HISGL+A G+ + ++Y + + SL+G
Sbjct: 257 HISGLVAA--GLIPSP----FEYSDVVTTTTHKSLRG 287
Score = 101 (40.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
G+ +A + A +G L DF++ NE K VA L K +E++S +FE+PG
Sbjct: 453 GVQIAKKYNAEAGKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPG 503
>UNIPROTKB|P50432 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6239 "Caenorhabditis elegans" [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] [GO:0009790 "embryo development"
evidence=IMP] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=TAS] [GO:0009069 "serine family amino acid
metabolic process" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 360 (131.8 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 68/122 (55%), Positives = 92/122 (75%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
++ +L + + DPE++ ++K EK RQ G+ELIASENFTS AV++ LGS + NKYSEG
Sbjct: 43 NNENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEG 102
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
PG RYYGGN+FID++E++ Q+R+L+ F LDP +WG NVQP SGSPANFAV A+ +N
Sbjct: 103 YPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYT-AIVGSN 161
Query: 122 AR 123
R
Sbjct: 162 GR 163
Score = 313 (115.2 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 75/176 (42%), Positives = 97/176 (55%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
GV+ G LYD EEKIN+AVFP LQGGPHNH I IA A+ Q S++F Y QV
Sbjct: 298 GVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVL 357
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT---- 282
NA L++ M K GY + TGGTD HL+L+DLR + G++ E VL+ IACNKNT
Sbjct: 358 KNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGD 417
Query: 283 -------GISLAAEIQAISGPKLVDFQTC---LHKNEDIVKKV-AALKKEIEDYSN 327
GI L G + DF+ +H+ I KK A K ++D+ +
Sbjct: 418 VSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKS 473
Score = 122 (48.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 102 PYSGSPANFAVCEKALPTNNARF--DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY P + L N F + +G +CY+R LDY RFR+I + + + +DM+
Sbjct: 197 PYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATKAGAYLMSDMA 256
Query: 160 HISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQG 196
HISGL+A G+ + ++Y + + SL+G
Sbjct: 257 HISGLVAA--GLIPSP----FEYSDVVTTTTHKSLRG 287
Score = 101 (40.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
G+ +A + A +G L DF++ NE K VA L K +E++S +FE+PG
Sbjct: 453 GVQIAKKYNAEAGKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPG 503
>ASPGD|ASPL0000040474 [details] [associations]
symbol:AN3058 species:162425 "Emericella nidulans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;RCA] [GO:0006520 "cellular amino acid metabolic
process" evidence=RCA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001306 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:FRRGVRS ProteinModelPortal:C8VIR5
EnsemblFungi:CADANIAT00010021 Uniprot:C8VIR5
Length = 471
Score = 315 (115.9 bits), Expect = 9.5e-61, Sum P(3) = 9.5e-61
Identities = 62/102 (60%), Positives = 74/102 (72%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L TDPE+ +++ E RQ + LIASENFTS AV + LGS + NKYSEG PG RYYGG
Sbjct: 18 LVDTDPEVAKIMENEIQRQRESVVLIASENFTSRAVFDALGSPMCNKYSEGYPGARYYGG 77
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
NQ ID IE++ Q R+LKAFNLD ++WG NVQ SGSPAN V
Sbjct: 78 NQHIDAIELLCQSRALKAFNLDADKWGVNVQCLSGSPANLQV 119
Score = 297 (109.6 bits), Expect = 9.5e-61, Sum P(3) = 9.5e-61
Identities = 60/117 (51%), Positives = 79/117 (67%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ KTG+ I+YD E IN +VFP QGGPHNH I A++ A+ A + EFK YQ QV
Sbjct: 264 GVRSTDPKTGKDIMYDLEGPINFSVFPGHQGGPHNHTITALSVALKYAATTEFKQYQEQV 323
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
NA L +E G+ +V+ GTD H++L+DLR L G++VE VLE+I IACNKN+
Sbjct: 324 IKNAKALENEFKAIGHKLVSDGTDSHMVLVDLRPKSLDGARVEAVLEQINIACNKNS 380
Score = 120 (47.3 bits), Expect = 2.9e-42, Sum P(3) = 2.9e-42
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 127 LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKI 186
L +GT+ Y R +DYAR R+I D+ + + DM+HISGLIA GV + ++Y + +
Sbjct: 190 LVAGTSAYCRLIDYARMRKIADKVGAYLVVDMAHISGLIAA--GVIPSP----FEYADVV 243
Query: 187 NNAVFPSLQG 196
SL+G
Sbjct: 244 TTTTHKSLRG 253
Score = 43 (20.2 bits), Expect = 9.5e-61, Sum P(3) = 9.5e-61
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 284 ISLAAEIQAI---SGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMP 332
I++ +QA KL DF+ + V ++ L+KEI +++ F +P
Sbjct: 421 INICKSVQAALPTDANKLKDFKAKVASGT--VPEINDLRKEIAAWASTFPLP 470
>SGD|S000004048 [details] [associations]
symbol:SHM2 "Cytosolic serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IMP;IDA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0006730 "one-carbon metabolic
process" evidence=IEA;IGI;IMP] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0043332 "mating projection
tip" evidence=IDA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000004048
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0043332 EMBL:BK006945 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 EMBL:X94607 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 EMBL:L22529 EMBL:Z73230 PIR:S61632
RefSeq:NP_013159.1 ProteinModelPortal:P37291 SMR:P37291
DIP:DIP-2602N IntAct:P37291 MINT:MINT-423439 STRING:P37291
PaxDb:P37291 PeptideAtlas:P37291 PRIDE:P37291 EnsemblFungi:YLR058C
GeneID:850747 KEGG:sce:YLR058C CYGD:YLR058c OMA:FRRGVRS
OrthoDB:EOG444PTT BioCyc:MetaCyc:YLR058C-MONOMER NextBio:966873
Genevestigator:P37291 GermOnline:YLR058C Uniprot:P37291
Length = 469
Score = 327 (120.2 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 63/102 (61%), Positives = 78/102 (76%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L TDPE+ S+IK E RQ + I+LIASENFTS +V + LG+ L NKYSEG PG RYYGG
Sbjct: 17 LVDTDPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPGARYYGG 76
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
N+ ID +EI+ QQR+LKAF++ P++WG NVQ SGSPAN V
Sbjct: 77 NEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQV 118
Score = 306 (112.8 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 59/117 (50%), Positives = 80/117 (68%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ + KTG+++LYD E IN +VFP QGGPHNH I A+ATA+ QA + EFK YQ QV
Sbjct: 263 GVRSINPKTGKEVLYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQV 322
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
NA L E GY +V+ GTD H++L+ LR+ + G++VE + E+I IA NKN+
Sbjct: 323 LKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNS 379
Score = 118 (46.6 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 102 PYSGSPANFAVCEKALPTNNARF--DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + L N + L +GT+ Y R +DY R R+I D+ + + DM+
Sbjct: 162 PYRVNPETGIIDYDTLEKNAILYRPKVLVAGTSAYCRLIDYKRMREIADKCGAYLMVDMA 221
Query: 160 HISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQG 196
HISGLIA GV + ++Y + + SL+G
Sbjct: 222 HISGLIAA--GVIPSP----FEYADIVTTTTHKSLRG 252
Score = 39 (18.8 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 32/131 (24%), Positives = 52/131 (39%)
Query: 212 QAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHL---ILIDLRKNKLTGSKVE 268
+A EFK+ ++ +N + ++ V G ++ I I L KN + G K
Sbjct: 327 KALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSA 386
Query: 269 LVLEEIAIACNKNTGISLAAE-----IQAISGPKLVDF----QTCLHKNEDIVKKVAALK 319
LV + I T + E +Q I+ K V+F Q L K+ +K A
Sbjct: 387 LVPGGVRIGAPAMTTRGMGEEDFHRIVQYIN--KAVEFAQQVQQSLPKDACRLKDFKAKV 444
Query: 320 KEIEDYSNQFE 330
E D N ++
Sbjct: 445 DEGSDVLNTWK 455
Score = 37 (18.1 bits), Expect = 4.9e-43, Sum P(3) = 4.9e-43
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 279 NKNTGISLAAEIQAISGPKLVDFQTCLHKN 308
+ +T +LA ++ + P+ ++QT + KN
Sbjct: 296 HNHTIAALATALKQAATPEFKEYQTQVLKN 325
>DICTYBASE|DDB_G0277947 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0277947 GO:GO:0005829 GO:GO:0045335 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897
RefSeq:XP_642026.1 ProteinModelPortal:Q54Z26 SMR:Q54Z26
STRING:Q54Z26 EnsemblProtists:DDB0230072 GeneID:8621237
KEGG:ddi:DDB_G0277947 OMA:LKEVASP ProtClustDB:PTZ00094
Uniprot:Q54Z26
Length = 457
Score = 349 (127.9 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 64/102 (62%), Positives = 79/102 (77%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L + D E++ L+ +EK RQ G+ELIASENFTS AV+E LGS NKY+EG PG RYYGG
Sbjct: 10 LKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGG 69
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+ +DE+E + Q+R+LKAF LD +WG NVQPYSGSPANFAV
Sbjct: 70 TEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAV 111
Score = 283 (104.7 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 71/176 (40%), Positives = 98/176 (55%)
Query: 162 SGLIAGVKG--VTKTGEKIL-YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF 218
SG+I +G V G++I YD E KIN AVFPSLQGGPH + I +A A+ +A S EF
Sbjct: 247 SGIIFFRRGKRVDGNGKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEADSQEF 306
Query: 219 KSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC 278
K Y QVK NA+ + + ++ +GY +VT GTD HLIL DLR +LTG+K E + I
Sbjct: 307 KEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITV 366
Query: 279 NKNT-----------GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIE 323
NKN GI + + G K DF+ K D + ++ ++ EI+
Sbjct: 367 NKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFE----KIADFLDRIVSISLEIQ 418
Score = 97 (39.2 bits), Expect = 4.4e-49, Sum P(3) = 4.4e-49
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 268 ELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSN 327
E E+IA ++ ISL EIQ G KLVDF ++K+++++ L+KE+E++S+
Sbjct: 397 EADFEKIADFLDRIVSISL--EIQGRVGKKLVDFVVEINKSKELLD----LRKEVEEFSS 450
Query: 328 QFEMPG 333
+F +PG
Sbjct: 451 KFTLPG 456
Score = 94 (38.1 bits), Expect = 4.4e-49, Sum P(3) = 4.4e-49
Identities = 27/100 (27%), Positives = 44/100 (44%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINN 188
SG + Y R DY R R I D+ + + DM+H SGL+A + +DY + + +
Sbjct: 183 SGASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSP------FDYCDVVTS 236
Query: 189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN 228
+L+G P + I + E + Y + K N
Sbjct: 237 TTHKTLRG-PRSGIIFFRRGKRVDGNGKEIEEYDIESKIN 275
>CGD|CAL0001464 [details] [associations]
symbol:SHM2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] [GO:0043332 "mating projection
tip" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 318 (117.0 bits), Expect = 6.2e-60, Sum P(2) = 6.2e-60
Identities = 62/117 (52%), Positives = 82/117 (70%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTG++ILYD E IN +VFP QGGPHNH I A+ATA+ QA + EFK YQ QV
Sbjct: 264 GVRSVNPKTGQEILYDLENPINFSVFPGHQGGPHNHTIAALATALKQANTPEFKEYQEQV 323
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
NA L E K+GY +V+ GTD H++L+ L+ ++ G++VE V E+I IA NKN+
Sbjct: 324 LKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNS 380
Score = 315 (115.9 bits), Expect = 6.2e-60, Sum P(2) = 6.2e-60
Identities = 62/111 (55%), Positives = 78/111 (70%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S + G L TDPE+ +IK E RQ + I LIASENFT+ AV + LG+ + NKYSEG
Sbjct: 9 SHRQLTEGHLKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEG 68
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG RYYGGN+ ID +E++ Q+R+LKAF L P++WG NVQ SGSPAN V
Sbjct: 69 YPGARYYGGNEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQV 119
Score = 115 (45.5 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 127 LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKI 186
L +GT+ Y R +DY R R+I D+ + + DM+HISGLIA GV + ++Y + +
Sbjct: 190 LVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAA--GVIPSP----FEYADIV 243
Query: 187 NNAVFPSLQG 196
SL+G
Sbjct: 244 TTTTHKSLRG 253
Score = 39 (18.8 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 30/124 (24%), Positives = 50/124 (40%)
Query: 212 QAQSDEF--KSYQAQVKANASH-----LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG 264
+A EF K Y+ SH L D+ I G V T ++ I L KN + G
Sbjct: 328 KALESEFTKKGYKLVSDGTDSHMVLVSLKDKQID-GARVETVCEKIN---IALNKNSIPG 383
Query: 265 SKVELVLEEIAIACNKNTGISLAAE-IQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIE 323
K LV + I T L E + I +DF ++ +++ ++ +++
Sbjct: 384 DKSALVPGGVRIGAPAMTTRGLGEEDFKKIVS--YIDF--AVNYAKEVQSQLPKDANKLK 439
Query: 324 DYSN 327
D+ N
Sbjct: 440 DFKN 443
Score = 38 (18.4 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---YH--VVTGGTDV 250
GG +H + + A S F++ +V + +M+++ Y V+ GT
Sbjct: 138 GGHLSHGYQT-DSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSA 196
Query: 251 HLILIDLRKNKLTGSKV 267
+ LID ++ + KV
Sbjct: 197 YCRLIDYKRMREIADKV 213
>UNIPROTKB|O13426 [details] [associations]
symbol:SHM2 "Serine hydroxymethyltransferase, cytosolic"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006544 "glycine metabolic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 318 (117.0 bits), Expect = 6.2e-60, Sum P(2) = 6.2e-60
Identities = 62/117 (52%), Positives = 82/117 (70%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTG++ILYD E IN +VFP QGGPHNH I A+ATA+ QA + EFK YQ QV
Sbjct: 264 GVRSVNPKTGQEILYDLENPINFSVFPGHQGGPHNHTIAALATALKQANTPEFKEYQEQV 323
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
NA L E K+GY +V+ GTD H++L+ L+ ++ G++VE V E+I IA NKN+
Sbjct: 324 LKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNS 380
Score = 315 (115.9 bits), Expect = 6.2e-60, Sum P(2) = 6.2e-60
Identities = 62/111 (55%), Positives = 78/111 (70%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S + G L TDPE+ +IK E RQ + I LIASENFT+ AV + LG+ + NKYSEG
Sbjct: 9 SHRQLTEGHLKDTDPEVDQIIKDEIDRQQHSIVLIASENFTTTAVFDALGTPMCNKYSEG 68
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG RYYGGN+ ID +E++ Q+R+LKAF L P++WG NVQ SGSPAN V
Sbjct: 69 YPGARYYGGNEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQV 119
Score = 115 (45.5 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 127 LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKI 186
L +GT+ Y R +DY R R+I D+ + + DM+HISGLIA GV + ++Y + +
Sbjct: 190 LVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAA--GVIPSP----FEYADIV 243
Query: 187 NNAVFPSLQG 196
SL+G
Sbjct: 244 TTTTHKSLRG 253
Score = 39 (18.8 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 30/124 (24%), Positives = 50/124 (40%)
Query: 212 QAQSDEF--KSYQAQVKANASH-----LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG 264
+A EF K Y+ SH L D+ I G V T ++ I L KN + G
Sbjct: 328 KALESEFTKKGYKLVSDGTDSHMVLVSLKDKQID-GARVETVCEKIN---IALNKNSIPG 383
Query: 265 SKVELVLEEIAIACNKNTGISLAAE-IQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIE 323
K LV + I T L E + I +DF ++ +++ ++ +++
Sbjct: 384 DKSALVPGGVRIGAPAMTTRGLGEEDFKKIVS--YIDF--AVNYAKEVQSQLPKDANKLK 439
Query: 324 DYSN 327
D+ N
Sbjct: 440 DFKN 443
Score = 38 (18.4 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---YH--VVTGGTDV 250
GG +H + + A S F++ +V + +M+++ Y V+ GT
Sbjct: 138 GGHLSHGYQT-DSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSA 196
Query: 251 HLILIDLRKNKLTGSKV 267
+ LID ++ + KV
Sbjct: 197 YCRLIDYKRMREIADKV 213
>POMBASE|SPAC24C9.12c [details] [associations]
symbol:SPAC24C9.12c "glycine hydroxymethyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC24C9.12c
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670 GO:GO:0006730
GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OrthoDB:EOG444PTT PIR:T38353 RefSeq:NP_594037.1
ProteinModelPortal:O13972 SMR:O13972 STRING:O13972 PRIDE:O13972
EnsemblFungi:SPAC24C9.12c.1 GeneID:2542651 KEGG:spo:SPAC24C9.12c
OMA:HMVLVDV NextBio:20803700 Uniprot:O13972
Length = 467
Score = 328 (120.5 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 65/119 (54%), Positives = 85/119 (71%)
Query: 1 MSSSTMLHGT-LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYS 59
MSS+ + T L + DP + +++ E RQ + + LIASENFTS AV++ LGS + NKYS
Sbjct: 1 MSSNDSIMLTPLKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYS 60
Query: 60 EGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP 118
EG PG RYYGGN+FID+IE + Q+R+L AFNLDP +WG NVQ SGSPAN V + +P
Sbjct: 61 EGYPGARYYGGNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMP 119
Score = 290 (107.1 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 69/173 (39%), Positives = 97/173 (56%)
Query: 167 GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
G++ K G I YD E+KIN +VFP QGGPHNH I A+A A+ Q Q +K YQAQV
Sbjct: 258 GLRKHDKKGNPIYYDLEDKINFSVFPGHQGGPHNHTITALAVALKQCQEPAYKEYQAQVV 317
Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISL 286
NA +E KRGY + GTD H++L+D++ + G++ E VLE I I NKNT S
Sbjct: 318 KNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSD 377
Query: 287 AAEIQAISGPKLVD--FQTCLHKNEDIVKKVAALKKEIEDYSN-QFEMPGQAD 336
+ SG ++ T K +D V+ V + + + +N Q E+P A+
Sbjct: 378 KSAFSP-SGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDAN 429
Score = 122 (48.0 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 102 PYSGSPANFAVCEKALPTNNARF---DFLSSGTTCYSRCLDYARFRQICDETDSIMFADM 158
PY P N + + + ++A+ L +GT+ Y R +DYAR RQI D ++ + DM
Sbjct: 157 PYRVDP-NTGLIDYDMLEHDAQLFRPKILVAGTSAYCRLIDYARMRQIADSVNAYLVVDM 215
Query: 159 SHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQG 196
+HISGL++ GV + ++Y + + SL+G
Sbjct: 216 AHISGLVSA--GVIPSP----FEYADVVTTTTHKSLRG 247
>TAIR|locus:2035937 [details] [associations]
symbol:SHM7 "serine hydroxymethyltransferase 7"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:IAKLQWA HSSP:P07511
EMBL:BT002738 IPI:IPI00548548 RefSeq:NP_564473.1 UniGene:At.23145
ProteinModelPortal:Q84WV0 STRING:Q84WV0 PaxDb:Q84WV0 PRIDE:Q84WV0
EnsemblPlants:AT1G36370.1 GeneID:840543 KEGG:ath:AT1G36370
TAIR:At1g36370 InParanoid:Q84WV0 PhylomeDB:Q84WV0
ProtClustDB:PLN02271 ArrayExpress:Q84WV0 Genevestigator:Q84WV0
Uniprot:Q84WV0
Length = 598
Score = 329 (120.9 bits), Expect = 4.0e-56, Sum P(3) = 4.0e-56
Identities = 79/174 (45%), Positives = 101/174 (58%)
Query: 15 DPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI 74
DP+++ L++KEK RQ+ GIELIASENF AV+E LGS L NKYSEG+PG RYY GNQ+I
Sbjct: 142 DPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYI 201
Query: 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-PTNNAR-FDFLSSGTT 132
D+IE + +R+L AF L+ ++WG NVQPYS + ANFAV L P D S G
Sbjct: 202 DQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGERIMGLDSPSGGHM 261
Query: 133 CYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKI 186
+ C + +I SI F + G K +K L DY KI
Sbjct: 262 SHGYCTPGGK--KI--SAASIFFESFPYKVNPQTGYIDYDKLEDKAL-DYRPKI 310
Score = 246 (91.7 bits), Expect = 4.0e-56, Sum P(3) = 4.0e-56
Identities = 53/101 (52%), Positives = 66/101 (65%)
Query: 180 YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
YD EEKIN AVFPSLQGGPHN+ I A+A A+ Q + E+K+Y Q+K NA L+ +++R
Sbjct: 404 YDLEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYIQQMKKNAQALAAALLRR 463
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280
+VTGGTD HL+L DL LTG E V E I NK
Sbjct: 464 KCRLVTGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNK 504
Score = 104 (41.7 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 84 RSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARF 143
+ + A ++ E + V P +G + +KAL + R L G + Y R D+AR
Sbjct: 271 KKISAASIFFESFPYKVNPQTGYIDYDKLEDKAL---DYRPKILICGGSSYPRDWDFARV 327
Query: 144 RQICDETDSIMFADMSHISGLIA 166
RQI D+ +++ DM+HISGL+A
Sbjct: 328 RQIADKCGAVLMCDMAHISGLVA 350
Score = 51 (23.0 bits), Expect = 4.0e-56, Sum P(3) = 4.0e-56
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 286 LAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMP 332
+ + +Q G +F L N+DI A L+ +E ++ Q+EMP
Sbjct: 549 ITSALQREHGKSHKEFVKSLCTNKDI----AELRNRVEAFALQYEMP 591
>TIGR_CMR|CHY_2557 [details] [associations]
symbol:CHY_2557 "serine hydroxymethyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006544 "glycine metabolic process" evidence=ISS]
[GO:0006553 "lysine metabolic process" evidence=ISS] [GO:0006563
"L-serine metabolic process" evidence=ISS] [GO:0006566 "threonine
metabolic process" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0006760 "folic acid-containing compound
metabolic process" evidence=ISS] [GO:0015947 "methane metabolic
process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 RefSeq:YP_361350.1 ProteinModelPortal:Q3A934
SMR:Q3A934 STRING:Q3A934 GeneID:3728195 KEGG:chy:CHY_2557
PATRIC:21278163 HOGENOM:HOG000239403 OMA:GLLSDPM
BioCyc:CHYD246194:GJCN-2556-MONOMER Uniprot:Q3A934
Length = 421
Score = 263 (97.6 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 55/107 (51%), Positives = 74/107 (69%)
Query: 5 TMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPG 64
T L+ L DPE++ ++KE RQ IELIASENF S AV+E +GS L NKY+EGLPG
Sbjct: 2 THLNLRLKDVDPEIFEAMEKELSRQREKIELIASENFVSRAVMEAMGSHLTNKYAEGLPG 61
Query: 65 KRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
KRYYGG +++D +E +A++R+ K F + NVQP+SG+ AN A
Sbjct: 62 KRYYGGCEYVDVVENLARERAKKLFGAEH----VNVQPHSGAQANMA 104
Score = 241 (89.9 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 48/101 (47%), Positives = 67/101 (66%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
++ KI+ VFP +QGGP H I A A A +A S EF+ YQ QV NA L++E+ K+G
Sbjct: 245 EHAAKIDKTVFPGVQGGPLMHVIAAKAVAFKEALSPEFREYQQQVVNNAKALAEELKKQG 304
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
+V+GGTD HL+L+D+R LTG + E +L+EI + NKN
Sbjct: 305 LRLVSGGTDNHLMLVDVRPVGLTGKRAEQLLDEIGVTVNKN 345
Score = 90 (36.7 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + Y R +D+ ++I DE + + DM+HI+GL+A
Sbjct: 173 AGASAYPRVIDFKHLKEIADEVGAYLMVDMAHIAGLVA 210
>TIGR_CMR|GSU_1607 [details] [associations]
symbol:GSU_1607 "serine hydroxymethyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239405
RefSeq:NP_952658.1 ProteinModelPortal:Q74CR5 SMR:Q74CR5
PRIDE:Q74CR5 GeneID:2685603 KEGG:gsu:GSU1607 PATRIC:22026061
OMA:IAKLQWA BioCyc:GSUL243231:GH27-1559-MONOMER Uniprot:Q74CR5
Length = 415
Score = 255 (94.8 bits), Expect = 4.6e-53, Sum P(3) = 4.6e-53
Identities = 48/102 (47%), Positives = 70/102 (68%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
+Y + +N+ +FP +QGGP H I A A A+ +A EFK+YQAQ+ NA L+DE++KRG
Sbjct: 241 EYAKTLNSNIFPGIQGGPLMHVIAAKAVALKEALQPEFKAYQAQIVKNAKALADELVKRG 300
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+ +V+GGTD HL+L++L +LTG E L++ I NKNT
Sbjct: 301 FRLVSGGTDNHLMLVNLTGTELTGKVAEESLDKAGITVNKNT 342
Score = 236 (88.1 bits), Expect = 4.6e-53, Sum P(3) = 4.6e-53
Identities = 51/98 (52%), Positives = 64/98 (65%)
Query: 15 DPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI 74
DP++ I+ E RQ +ELIASENF S AVLE GS + NKY+EG PGKRYYGG +
Sbjct: 8 DPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHV 67
Query: 75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
D +E +A +R+ + F D NVQP+SGS AN AV
Sbjct: 68 DVVENLAIERAKELFGADH----ANVQPHSGSQANMAV 101
Score = 96 (38.9 bits), Expect = 4.6e-53, Sum P(3) = 4.6e-53
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
G + Y R +D+A FR I D+ +++ DM+HI+GL+A
Sbjct: 170 GASAYPRTIDFAAFRIIADKVGAVIMVDMAHIAGLVA 206
>TIGR_CMR|CJE_0451 [details] [associations]
symbol:CJE_0451 "serine hydroxymethyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK13034 HOGENOM:HOG000239405
RefSeq:YP_178470.1 ProteinModelPortal:Q5HW65 SMR:Q5HW65
STRING:Q5HW65 PRIDE:Q5HW65 GeneID:3231213 KEGG:cjr:CJE0451
PATRIC:20042602 OMA:ALATWIC BioCyc:CJEJ195099:GJC0-456-MONOMER
Uniprot:Q5HW65
Length = 414
Score = 255 (94.8 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 55/103 (53%), Positives = 67/103 (65%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L D E++ L KE RQ G+E+IASENFT V+E +GS L NKY+EG PGKRYYG
Sbjct: 2 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYG 61
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G +F+DEIE +A +R K FN NVQP SGS AN V
Sbjct: 62 GCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGV 100
Score = 197 (74.4 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 43/113 (38%), Positives = 64/113 (56%)
Query: 170 GVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA 229
G+ T ++ L +KIN+A+FP +QGGP H I A A SDE+K Y QV+ NA
Sbjct: 232 GIIMTNDEEL---AKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNA 288
Query: 230 SHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
L++ ++ R + +V+ GTD HL+L+ + +G +L L I NKNT
Sbjct: 289 QVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNT 341
Score = 110 (43.8 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 19/39 (48%), Positives = 31/39 (79%)
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-AG 167
G + Y+R +D+A+FR+I DE + +FAD++HI+GL+ AG
Sbjct: 168 GASAYARVIDFAKFREIADEVGAYLFADIAHIAGLVVAG 206
Score = 38 (18.4 bits), Expect = 5.9e-43, Sum P(3) = 5.9e-43
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 151 DSIMFADMSHISGLIAGVKGVTKTGE 176
D I+ D+SH L G K V+ +G+
Sbjct: 109 DKILGMDLSHGGHLTHGAK-VSSSGK 133
>UNIPROTKB|P0A825 [details] [associations]
symbol:glyA species:83333 "Escherichia coli K-12"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0006565 "L-serine
catabolic process" evidence=IDA] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA;IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005829
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0035999 GO:GO:0006546 GO:GO:0006565
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 ProtClustDB:PRK00011 OMA:GKIDYED EMBL:V00283
EMBL:J01620 PIR:A00559 RefSeq:NP_417046.1 RefSeq:YP_490779.1
PDB:1DFO PDB:1EQB PDB:3G8M PDBsum:1DFO PDBsum:1EQB PDBsum:3G8M
ProteinModelPortal:P0A825 SMR:P0A825 DIP:DIP-36205N IntAct:P0A825
MINT:MINT-7293373 SWISS-2DPAGE:P0A825 PaxDb:P0A825 PRIDE:P0A825
EnsemblBacteria:EBESCT00000003405 EnsemblBacteria:EBESCT00000017377
GeneID:12932320 GeneID:947022 KEGG:ecj:Y75_p2504 KEGG:eco:b2551
PATRIC:32120501 EchoBASE:EB0403 EcoGene:EG10408
BioCyc:EcoCyc:GLYOHMETRANS-MONOMER BioCyc:ECOL316407:JW2535-MONOMER
BioCyc:MetaCyc:GLYOHMETRANS-MONOMER EvolutionaryTrace:P0A825
Genevestigator:P0A825 GO:GO:0019264 Uniprot:P0A825
Length = 417
Score = 245 (91.3 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 53/102 (51%), Positives = 70/102 (68%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+A D EL+ +++EK RQ IELIASEN+TS V++ GS L NKY+EG PGKRYYGG
Sbjct: 8 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+++D +E +A R+ + F D NVQP+SGS ANFAV
Sbjct: 68 CEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAV 105
Score = 238 (88.8 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 53/121 (43%), Positives = 72/121 (59%)
Query: 165 IAGVKG---VTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
+AG +G + K G + LY +K+N+AVFP QGGP H I A A+ +A EFK+Y
Sbjct: 231 LAGPRGGLILAKGGSEELY---KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTY 287
Query: 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
Q QV NA + + ++RGY VV+GGTD HL L+DL LTG + + L I NKN
Sbjct: 288 QQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKN 347
Query: 282 T 282
+
Sbjct: 348 S 348
Score = 98 (39.6 bits), Expect = 2.1e-50, Sum P(3) = 2.1e-50
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 99 NVQPYSGSPA----NFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIM 154
N+ PY G A ++A EK + + + G + YS +D+A+ R+I D + +
Sbjct: 141 NIVPY-GIDATGHIDYADLEKQAKEHKPKM--IIGGFSAYSGVVDWAKMREIADSIGAYL 197
Query: 155 FADMSHISGLIA-GV 168
F DM+H++GL+A GV
Sbjct: 198 FVDMAHVAGLVAAGV 212
>UNIPROTKB|Q4KLG7 [details] [associations]
symbol:Shmt1 "Serine hydroxymethyltransferase"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
RGD:1312011 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 EMBL:BC099219
IPI:IPI00627076 UniGene:Rn.3684 STRING:Q4KLG7
Ensembl:ENSRNOT00000057973 OMA:MTPEFKL Genevestigator:Q4KLG7
Uniprot:Q4KLG7
Length = 352
Score = 332 (121.9 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 67/117 (57%), Positives = 81/117 (69%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GV+ V KTGE+ Y+ E IN+AVFP LQGGPHNHAI +A A+ QA + EFK YQ QV
Sbjct: 140 GVRSVDPKTGEETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTTEFKIYQLQV 199
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN LSD + + GY +VTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 200 LANCRALSDALTELGYKIVTGGSDNHLILMDLRPKGTDGGRAEKVLEACSIACNKNT 256
Score = 130 (50.8 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GV 168
+GT+CYSR LDYAR R+I D+ + + ADM+HISGL+A GV
Sbjct: 68 AGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGV 108
Score = 79 (32.9 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
GI L +IQ+ + L +F+ L +E VAAL++E+E++++ F +PG D
Sbjct: 296 GIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAVAALREEVENFASNFSLPGLPD 351
>UNIPROTKB|B4DLV4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 EMBL:CH471054 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807
EMBL:AC137834 UniGene:Hs.741179 HGNC:HGNC:10852 ChiTaRS:SHMT2
EMBL:AK297173 IPI:IPI00794549 SMR:B4DLV4 STRING:B4DLV4
Ensembl:ENST00000393827 UCSC:uc001snj.2 Uniprot:B4DLV4
Length = 408
Score = 330 (121.2 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 68/125 (54%), Positives = 89/125 (71%)
Query: 162 SGLI---AGVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI GVK V KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 191 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 250
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y QV NA ++D +++RGY +V+GGTD HL+L+DLR L G++ E VLE ++I
Sbjct: 251 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSIT 310
Query: 278 CNKNT 282
NKNT
Sbjct: 311 ANKNT 315
Score = 129 (50.5 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 99 NVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADM 158
+VQP +G + AL R + +GT+ Y+R +DYAR R++CDE + + ADM
Sbjct: 100 SVQPKTGL---IDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADM 156
Query: 159 SHISGLIA 166
+HISGL+A
Sbjct: 157 AHISGLVA 164
Score = 82 (33.9 bits), Expect = 3.4e-49, Sum P(3) = 3.4e-49
Identities = 15/51 (29%), Positives = 34/51 (66%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
G+++ E+++ + KL DF++ L K+ + +++A L++ +E ++ F MPG
Sbjct: 355 GVNIGLEVKSKTA-KLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPG 404
>UNIPROTKB|Q9KMP4 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 246 (91.7 bits), Expect = 4.5e-49, Sum P(3) = 4.5e-49
Identities = 62/128 (48%), Positives = 76/128 (59%)
Query: 175 GEKILYDYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231
G IL + EE KIN+AVFP LQGGP H I A A A +A EF++Y V NA
Sbjct: 251 GGMILTNSEEIHKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTYIDSVIDNAKV 310
Query: 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQ 291
L++ + RG +VTGGTD HL+L+DLR L G++VE LE I CNKN GI E
Sbjct: 311 LAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKN-GIPFDEEKP 369
Query: 292 AI-SGPKL 298
I SG +L
Sbjct: 370 MITSGIRL 377
Score = 226 (84.6 bits), Expect = 4.5e-49, Sum P(3) = 4.5e-49
Identities = 49/102 (48%), Positives = 68/102 (66%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
LA T+ +++ I+ E RQ IELIASEN S AV++ G+CL NKY+EG PG+RYYGG
Sbjct: 22 LAATNDAVFAAIQAEYTRQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRYYGG 81
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+ +D +E +A +R+ F Q+ NVQP+SG+ AN AV
Sbjct: 82 CEHVDSVEQIAIERAKMLFQC---QYA-NVQPHSGAQANGAV 119
Score = 95 (38.5 bits), Expect = 4.5e-49, Sum P(3) = 4.5e-49
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + R +D+A+FR I DE +++ DM+HI+GL+A
Sbjct: 187 AGGSAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVA 224
>TIGR_CMR|VC_A0278 [details] [associations]
symbol:VC_A0278 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 246 (91.7 bits), Expect = 4.5e-49, Sum P(3) = 4.5e-49
Identities = 62/128 (48%), Positives = 76/128 (59%)
Query: 175 GEKILYDYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231
G IL + EE KIN+AVFP LQGGP H I A A A +A EF++Y V NA
Sbjct: 251 GGMILTNSEEIHKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTYIDSVIDNAKV 310
Query: 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQ 291
L++ + RG +VTGGTD HL+L+DLR L G++VE LE I CNKN GI E
Sbjct: 311 LAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKN-GIPFDEEKP 369
Query: 292 AI-SGPKL 298
I SG +L
Sbjct: 370 MITSGIRL 377
Score = 226 (84.6 bits), Expect = 4.5e-49, Sum P(3) = 4.5e-49
Identities = 49/102 (48%), Positives = 68/102 (66%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
LA T+ +++ I+ E RQ IELIASEN S AV++ G+CL NKY+EG PG+RYYGG
Sbjct: 22 LAATNDAVFAAIQAEYTRQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRYYGG 81
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+ +D +E +A +R+ F Q+ NVQP+SG+ AN AV
Sbjct: 82 CEHVDSVEQIAIERAKMLFQC---QYA-NVQPHSGAQANGAV 119
Score = 95 (38.5 bits), Expect = 4.5e-49, Sum P(3) = 4.5e-49
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + R +D+A+FR I DE +++ DM+HI+GL+A
Sbjct: 187 AGGSAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVA 224
>UNIPROTKB|F1SL74 [details] [associations]
symbol:LOC100626911 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:CU633428 EMBL:FP340566
Ensembl:ENSSSCT00000023184 Ensembl:ENSSSCT00000023666
Uniprot:F1SL74
Length = 504
Score = 381 (139.2 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 99/229 (43%), Positives = 130/229 (56%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 48 SLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNA--RFDFL 127
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A L ++ D
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLP 167
Query: 128 SSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKIN 187
G + D R SI F M + K KTG L DY++
Sbjct: 168 DGGHLTHGYMTDVKRI-----SATSIFFESMPY--------KLNPKTG---LIDYDQLAL 211
Query: 188 NA-VF-PSLQ-GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS 233
A +F P L G +A I A ++ DE K A + A+ +H+S
Sbjct: 212 TARLFRPRLIIAGTSAYA-RLIDYARMREVCDEVK---AHLLADMAHIS 256
Score = 330 (121.2 bits), Expect = 6.1e-49, Sum P(3) = 6.1e-49
Identities = 68/125 (54%), Positives = 89/125 (71%)
Query: 162 SGLIAGVKGVT----KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI KGV KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 287 SGLIFYRKGVRTVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 346
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y QV NA ++D +++RGY +V+GGTD HL+L+DLR L G++VE VLE ++I
Sbjct: 347 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARVERVLELVSIT 406
Query: 278 CNKNT 282
NKNT
Sbjct: 407 ANKNT 411
Score = 130 (50.8 bits), Expect = 6.1e-49, Sum P(3) = 6.1e-49
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + + AL R + +GT+ Y+R +DYAR R++CDE + + ADM+
Sbjct: 194 PYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMA 253
Query: 160 HISGLIA 166
HISGL+A
Sbjct: 254 HISGLVA 260
Score = 85 (35.0 bits), Expect = 6.1e-49, Sum P(3) = 6.1e-49
Identities = 16/51 (31%), Positives = 34/51 (66%)
Query: 283 GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
G+S+ E+++ + KL DF++ L K+ + +++A L++ +E ++ F MPG
Sbjct: 451 GVSIGLEVKSKT-TKLQDFKSFLLKDPETCRRLADLRQRVEQFARAFPMPG 500
>UNIPROTKB|B4DPM9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0008168 GO:GO:0035999 EMBL:AC127537 GO:GO:0008732
GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264 HOVERGEN:HBG002807
UniGene:Hs.513987 UniGene:Hs.636044 HGNC:HGNC:10850 ChiTaRS:SHMT1
EMBL:AL353997 EMBL:AK298415 IPI:IPI01015924 SMR:B4DPM9
STRING:B4DPM9 Ensembl:ENST00000539052 Uniprot:B4DPM9
Length = 345
Score = 335 (123.0 bits), Expect = 9.0e-49, Sum P(3) = 9.0e-49
Identities = 68/117 (58%), Positives = 83/117 (70%)
Query: 167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
GVK V KTG++ILY+ E IN+AVFP LQGGPHNHAI +A A+ QA + EFK YQ QV
Sbjct: 134 GVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQV 193
Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
AN LS+ + + GY +VTGG+D HLIL+DLR G + E VLE +IACNKNT
Sbjct: 194 VANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNT 250
Score = 134 (52.2 bits), Expect = 9.0e-49, Sum P(3) = 9.0e-49
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 102 PYSGSPANFAVCEKALPTNNARFD--FLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + L N F + +GT+CYSR L+YAR R+I DE + + ADM+
Sbjct: 33 PYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMA 92
Query: 160 HISGLIA-GV 168
HISGL+A GV
Sbjct: 93 HISGLVAAGV 102
Score = 68 (29.0 bits), Expect = 9.0e-49, Sum P(3) = 9.0e-49
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 283 GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
GI L +IQ+ +G + L +F+ L + V AL++E+E +++ F +PG D
Sbjct: 290 GIELTLQIQSDTGVRATLKEFKERL-AGDKYQAAVQALREEVESFASLFPLPGLPD 344
>UNIPROTKB|Q9KTG1 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 247 (92.0 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 53/102 (51%), Positives = 70/102 (68%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+A DPELY+ I++E RQ IELIASEN+TS V++ GS L NKY+EG PGKRYYGG
Sbjct: 8 IADYDPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+++D+ E +A R+ + F + NVQP+SGS AN AV
Sbjct: 68 CEYVDKAEALAIDRACQLFGCEY----ANVQPHSGSQANSAV 105
Score = 209 (78.6 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 48/121 (39%), Positives = 70/121 (57%)
Query: 165 IAGVKG---VTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
+AG +G ++ GE+ +Y +K+N+AVFP QGGP H I A A A +A EFK Y
Sbjct: 231 LAGPRGGLILSNAGEE-MY---KKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKEY 286
Query: 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
QA+V NA + + +RGY +V+ T+ HL L+DL +TG + + L I NKN
Sbjct: 287 QARVVKNAKAMVAQFQERGYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKN 346
Query: 282 T 282
+
Sbjct: 347 S 347
Score = 99 (39.9 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 99 NVQPYSGSPA---NFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMF 155
NV PY A N+ E AL + + + G + YS+ +D+ R R+I D+ + +F
Sbjct: 141 NVIPYGIDEAGQINYDEME-ALALEH-KPKMIIGGFSAYSQIVDWKRMREIADKVGAYLF 198
Query: 156 ADMSHISGLIA-GV 168
DM+H++GLIA GV
Sbjct: 199 VDMAHVAGLIAAGV 212
>TIGR_CMR|VC_0941 [details] [associations]
symbol:VC_0941 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 247 (92.0 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 53/102 (51%), Positives = 70/102 (68%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+A DPELY+ I++E RQ IELIASEN+TS V++ GS L NKY+EG PGKRYYGG
Sbjct: 8 IADYDPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+++D+ E +A R+ + F + NVQP+SGS AN AV
Sbjct: 68 CEYVDKAEALAIDRACQLFGCEY----ANVQPHSGSQANSAV 105
Score = 209 (78.6 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 48/121 (39%), Positives = 70/121 (57%)
Query: 165 IAGVKG---VTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
+AG +G ++ GE+ +Y +K+N+AVFP QGGP H I A A A +A EFK Y
Sbjct: 231 LAGPRGGLILSNAGEE-MY---KKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKEY 286
Query: 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
QA+V NA + + +RGY +V+ T+ HL L+DL +TG + + L I NKN
Sbjct: 287 QARVVKNAKAMVAQFQERGYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKN 346
Query: 282 T 282
+
Sbjct: 347 S 347
Score = 99 (39.9 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 99 NVQPYSGSPA---NFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMF 155
NV PY A N+ E AL + + + G + YS+ +D+ R R+I D+ + +F
Sbjct: 141 NVIPYGIDEAGQINYDEME-ALALEH-KPKMIIGGFSAYSQIVDWKRMREIADKVGAYLF 198
Query: 156 ADMSHISGLIA-GV 168
DM+H++GLIA GV
Sbjct: 199 VDMAHVAGLIAAGV 212
>TIGR_CMR|NSE_0218 [details] [associations]
symbol:NSE_0218 "serine hydroxymethyltransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897 RefSeq:YP_506113.1
ProteinModelPortal:Q2GEI3 SMR:Q2GEI3 STRING:Q2GEI3 PRIDE:Q2GEI3
GeneID:3932003 KEGG:nse:NSE_0218 PATRIC:22680535 OMA:INEVIQG
ProtClustDB:CLSK2528038 BioCyc:NSEN222891:GHFU-249-MONOMER
Uniprot:Q2GEI3
Length = 419
Score = 243 (90.6 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 53/110 (48%), Positives = 70/110 (63%)
Query: 175 GEKILYDYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231
G +L + EE KIN+A+FP LQGGP HAI A A A +A + EFK Y V NA
Sbjct: 242 GAIVLTNSEELIRKINSAIFPGLQGGPQMHAIAARAVAFGEALTTEFKEYIRSVIRNAKT 301
Query: 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
L++ + +RG+ V++GGTD H+++IDLRK L G+ L LE I CNKN
Sbjct: 302 LANVLRERGFDVLSGGTDTHIVMIDLRKLNLKGNVSALKLESAGIICNKN 351
Score = 221 (82.9 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 55/121 (45%), Positives = 70/121 (57%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
++ DP + +I E RQ ++LIASENF S AVLE GS NKY+EG PGKRYY G
Sbjct: 13 ISAVDPAVARIIDGEVSRQRKHLQLIASENFASAAVLEAQGSVFTNKYAEGYPGKRYYCG 72
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDF-LSS 129
++ D+IE +A +R K F NVQP+SGS AN AV L + F L+S
Sbjct: 73 CEYADQIERLAIERVCKLFGCSY----ANVQPHSGSQANQAVFLALLNPGDTVLGFSLAS 128
Query: 130 G 130
G
Sbjct: 129 G 129
Score = 91 (37.1 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + YS+ +D+ FR+I DE + + D++H +GLIA
Sbjct: 178 AGASAYSKYIDFKSFREIADEVGAYLLGDVAHYAGLIA 215
>TIGR_CMR|SO_3471 [details] [associations]
symbol:SO_3471 "serine hydroxymethyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 OMA:AICAKFP GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239403
RefSeq:NP_719020.1 ProteinModelPortal:Q8EBN8 SMR:Q8EBN8
GeneID:1171147 KEGG:son:SO_3471 PATRIC:23526638 Uniprot:Q8EBN8
Length = 417
Score = 241 (89.9 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 52/102 (50%), Positives = 69/102 (67%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+A DPEL++ I+ E RQ IELIASEN+TS V++ GS L NKY+EG PGKRYYGG
Sbjct: 8 IADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+++D +E +A +R+ + F NVQP+SGS AN AV
Sbjct: 68 CEYVDVVETLAIERAKQLFGATY----ANVQPHSGSQANSAV 105
Score = 216 (81.1 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 49/121 (40%), Positives = 71/121 (58%)
Query: 165 IAGVKG---VTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
+AG +G ++ ++ LY +K+N+AVFP QGGP H I A A +A EFK+Y
Sbjct: 231 LAGPRGGIILSAADDEELY---KKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKTY 287
Query: 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
Q QV NA + + ++RGY +V+GGT HL+L+DL LTG + + L I NKN
Sbjct: 288 QQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKN 347
Query: 282 T 282
+
Sbjct: 348 S 348
Score = 98 (39.6 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GV 168
G + YS +D+AR R+I D+ + +F DM+H++GLIA GV
Sbjct: 173 GFSAYSGIVDWARMREIADKIGAYLFVDMAHVAGLIAAGV 212
Score = 41 (19.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 170 GVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
G+ ++G KI YD E++ P + G + G + A ++ +D+ +Y
Sbjct: 146 GIDESG-KIDYDEMERLAVEHKPKMMIGGFSAYSGIVDWARMREIADKIGAY 196
>TIGR_CMR|SPO_1572 [details] [associations]
symbol:SPO_1572 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 244 (91.0 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 54/119 (45%), Positives = 71/119 (59%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
D +K+N+A+FP +QGGP H I A A A +A EFK+Y QV ANA LSD++IK G
Sbjct: 253 DIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVIANAQALSDQLIKGG 312
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAI-SGPKL 298
VT GTD H++L+DLR + G+ E L I CNKN G+ E + SG +L
Sbjct: 313 LDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKN-GVPFDPEKPTVTSGIRL 370
Score = 225 (84.3 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 52/105 (49%), Positives = 67/105 (63%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L++ DPEL+ I E RQ + IELIASEN S AV++ GS + NKY+EG PG+RYYGG
Sbjct: 15 LSERDPELFGAITSELGRQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRRYYGG 74
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAV 112
Q++D E +A +R+ + F GC NVQP SGS AN V
Sbjct: 75 CQYVDIAENLAIERAKQLF-------GCGFANVQPNSGSQANQGV 112
Score = 79 (32.9 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + R +D+AR R+I D + + DM+H +GL+A
Sbjct: 180 AGGSAIPRQIDFARMREIADMVGAYLHVDMAHFAGLVA 217
>TIGR_CMR|SPO_2940 [details] [associations]
symbol:SPO_2940 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 244 (91.0 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 54/119 (45%), Positives = 71/119 (59%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
D +K+N+A+FP +QGGP H I A A A +A EFK+Y QV ANA LSD++IK G
Sbjct: 253 DIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVIANAQALSDQLIKGG 312
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAI-SGPKL 298
VT GTD H++L+DLR + G+ E L I CNKN G+ E + SG +L
Sbjct: 313 LDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKN-GVPFDPEKPTVTSGIRL 370
Score = 225 (84.3 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 52/105 (49%), Positives = 67/105 (63%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L++ DPEL+ I E RQ + IELIASEN S AV++ GS + NKY+EG PG+RYYGG
Sbjct: 15 LSERDPELFGAITSELGRQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRRYYGG 74
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAV 112
Q++D E +A +R+ + F GC NVQP SGS AN V
Sbjct: 75 CQYVDIAENLAIERAKQLF-------GCGFANVQPNSGSQANQGV 112
Score = 79 (32.9 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + R +D+AR R+I D + + DM+H +GL+A
Sbjct: 180 AGGSAIPRQIDFARMREIADMVGAYLHVDMAHFAGLVA 217
>TIGR_CMR|BA_5558 [details] [associations]
symbol:BA_5558 "serine hydroxymethyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 RefSeq:NP_847716.1
RefSeq:YP_022227.1 RefSeq:YP_031404.1 ProteinModelPortal:Q81JY4
SMR:Q81JY4 PRIDE:Q81JY4 DNASU:1085246
EnsemblBacteria:EBBACT00000011325 EnsemblBacteria:EBBACT00000016380
EnsemblBacteria:EBBACT00000022066 GeneID:1085246 GeneID:2820074
GeneID:2851919 KEGG:ban:BA_5558 KEGG:bar:GBAA_5558 KEGG:bat:BAS5165
HOGENOM:HOG000239405 OMA:CREAHAK
BioCyc:BANT260799:GJAJ-5240-MONOMER
BioCyc:BANT261594:GJ7F-5419-MONOMER Uniprot:Q81JY4
Length = 413
Score = 230 (86.0 bits), Expect = 4.9e-46, Sum P(3) = 4.9e-46
Identities = 45/101 (44%), Positives = 67/101 (66%)
Query: 182 YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY 241
+ ++I+ ++FP +QGGP H I A A A +A D+FK+Y + NA+ L++ + K G
Sbjct: 242 FAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFKTYAQNIINNANRLAEGLQKEGL 301
Query: 242 HVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+V+GGTD HLILID+R ++TG E VL+E+ I NKNT
Sbjct: 302 TLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNT 342
Score = 230 (86.0 bits), Expect = 4.9e-46, Sum P(3) = 4.9e-46
Identities = 50/102 (49%), Positives = 68/102 (66%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L + D ++++ I+ E RQ + IELIASENF S AV+E GS L NKY+EG PGKRYYGG
Sbjct: 4 LKRQDEKVFAAIEAELGRQRSKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+ +D +E +A+ R + F + NVQP+SG+ AN AV
Sbjct: 64 CEHVDVVEDIARDRVKEIFGAEH----VNVQPHSGAQANMAV 101
Score = 104 (41.7 bits), Expect = 4.9e-46, Sum P(3) = 4.9e-46
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + Y R +D+ RFR+I DE + + DM+HI+GL+A
Sbjct: 169 AGASAYPRVIDFKRFREIADEVGAYLMVDMAHIAGLVA 206
Score = 41 (19.5 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 105 GSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDY 140
GSP NF+ +++F+ G S C++Y
Sbjct: 126 GSPVNFS---------GVQYNFVEYGVDAESHCINY 152
>TIGR_CMR|ECH_0311 [details] [associations]
symbol:ECH_0311 "serine hydroxymethyltransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 HSSP:P34897
RefSeq:YP_507132.1 ProteinModelPortal:Q2GHF1 SMR:Q2GHF1
STRING:Q2GHF1 PRIDE:Q2GHF1 GeneID:3927190 KEGG:ech:ECH_0311
PATRIC:20576127 OMA:LELTHQF BioCyc:ECHA205920:GJNR-311-MONOMER
Uniprot:Q2GHF1
Length = 420
Score = 237 (88.5 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 47/110 (42%), Positives = 67/110 (60%)
Query: 175 GEKILYDYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231
G I+ +YE+ KI +++FP +QGGP H I A A A +A EFK Y Q+ N+
Sbjct: 239 GAVIMTNYEDIHKKIQSSIFPGMQGGPLMHVIAAKAVAFAEALKPEFKDYAKQIIKNSKA 298
Query: 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
L + +RG +VTGGTD H++++DLR +TG L LE++ I CNKN
Sbjct: 299 LGEVFKERGLDLVTGGTDSHMVVLDLRSKSVTGKDAVLALEKLGIICNKN 348
Score = 221 (82.9 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
+L L + D E+++ I E +RQ +G++LIASENF S AVL+ GS NKY+EG PGK
Sbjct: 5 ILDDDLQEVDAEVFNCISGELNRQNSGLQLIASENFVSKAVLQAQGSIFTNKYAEGYPGK 64
Query: 66 RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAV 112
RYY G F D +E +A +R + F GC NVQP+SGS AN V
Sbjct: 65 RYYCGCHFADIVENLAIERLCRLF-------GCKFANVQPHSGSQANQGV 107
Score = 96 (38.9 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G++ Y R +D+ RFR+I D+ + + AD++H +GLIA
Sbjct: 175 AGSSSYPRVIDFKRFREIADKVGAYLLADIAHYAGLIA 212
Score = 53 (23.7 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 114 EKALPTNNARFDFLSSGTTCYSRCLDYARFRQI----CDETDSIMFADMSHIS---GLIA 166
EK T+ RF S+ T SR L + FR+I CD DS+ +D +S +I
Sbjct: 355 EKPFVTSGLRFG--SAAET--SRGLQESEFREIGSMVCDVIDSLKASDSVRLSVERDIIK 410
Query: 167 GVKGVT 172
VK +T
Sbjct: 411 RVKELT 416
Score = 37 (18.1 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 317 ALKKEIEDYSNQ 328
ALK E +DY+ Q
Sbjct: 280 ALKPEFKDYAKQ 291
>UNIPROTKB|O53615 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006544 "glycine metabolic
process" evidence=IDA] [GO:0006563 "L-serine metabolic process"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842572 GO:GO:0006544 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 BRENDA:2.1.2.1
PIR:G70848 RefSeq:NP_214584.1 RefSeq:NP_334486.1
RefSeq:YP_006513385.1 ProteinModelPortal:O53615 SMR:O53615
PRIDE:O53615 EnsemblBacteria:EBMYCT00000002193
EnsemblBacteria:EBMYCT00000071276 GeneID:13316049 GeneID:886983
GeneID:922815 KEGG:mtc:MT0076 KEGG:mtu:Rv0070c KEGG:mtv:RVBD_0070c
PATRIC:18121891 TubercuList:Rv0070c OMA:DYLIDMD Uniprot:O53615
Length = 425
Score = 233 (87.1 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 50/111 (45%), Positives = 70/111 (63%)
Query: 7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
L+ +L DP++ +LI E RQ +G+E+IASEN+ LAV++ GS L NKY+EG PG+R
Sbjct: 4 LNDSLTAFDPDIAALIDGELRRQESGLEMIASENYAPLAVMQAQGSVLTNKYAEGYPGRR 63
Query: 67 YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL 117
YYGG +F+D +E +A R F + NVQP+SG+ AN A L
Sbjct: 64 YYGGCEFVDGVEQLAIDRVKALFGAEY----ANVQPHSGATANAATMHALL 110
Score = 190 (71.9 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 45/103 (43%), Positives = 60/103 (58%)
Query: 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQ----VKANASHLSD-EMIK 238
+KIN+AVFP QGGP H I A ATA A EF Q + + A L+ ++ +
Sbjct: 249 KKINSAVFPGQQGGPLEHVIAAKATAFKMAAQPEFAQRQQRCLDGARILAGRLTQPDVAE 308
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
RG V+TGGTDVHL+L+DLR +L G + E L + I N+N
Sbjct: 309 RGIAVLTGGTDVHLVLVDLRDAELDGQQAEDRLAAVDITVNRN 351
Score = 113 (44.8 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 111 AVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GV 168
AV E A T+ + + +G + Y R LD+ARFR I DE D+++ DM+H +GL+A GV
Sbjct: 158 AVAEAAR-THRPKM--IIAGWSAYPRQLDFARFRAIADEVDAVLMVDMAHFAGLVAAGV 213
>TIGR_CMR|CPS_3844 [details] [associations]
symbol:CPS_3844 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK13034
RefSeq:YP_270506.1 ProteinModelPortal:Q47XG4 SMR:Q47XG4
STRING:Q47XG4 GeneID:3518659 KEGG:cps:CPS_3844 PATRIC:21470595
OMA:LQSRDPV BioCyc:CPSY167879:GI48-3861-MONOMER Uniprot:Q47XG4
Length = 431
Score = 230 (86.0 bits), Expect = 6.6e-43, Sum P(3) = 6.6e-43
Identities = 54/119 (45%), Positives = 70/119 (58%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
D +KIN+AVFP LQGGP H I A A A+ + F +Y QV +NA L+ + +RG
Sbjct: 256 DVAKKINSAVFPGLQGGPLMHVIAAKAVALGEVLEPSFGAYIKQVLSNARVLASTLQQRG 315
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAI-SGPKL 298
+VT GTD HL+L+DLR L G+ E LE I CNKN GI +E + SG +L
Sbjct: 316 CDIVTDGTDTHLMLVDLRPKGLKGNTTEESLERAGITCNKN-GIPFDSEKPMVTSGIRL 373
Score = 210 (79.0 bits), Expect = 6.6e-43, Sum P(3) = 6.6e-43
Identities = 49/102 (48%), Positives = 63/102 (61%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L+ TD + I E+ RQ IELIASEN S AV+E G+ L NKY+EG PG+RYYGG
Sbjct: 18 LSSTDGAVQVAIDLEEARQNQQIELIASENIVSKAVMEAQGTVLTNKYAEGYPGRRYYGG 77
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+ +D +E +A R+ F D NVQP+SG+ AN AV
Sbjct: 78 CEHVDLVETLAIDRAKLIFKAD----FVNVQPHSGAQANGAV 115
Score = 96 (38.9 bits), Expect = 6.6e-43, Sum P(3) = 6.6e-43
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + R +D+A+FR+I D+ +I+ DM+HI+GL+A
Sbjct: 183 AGGSAIPRQIDFAKFREIADQVGAILMVDMAHIAGLVA 220
>UNIPROTKB|H0YIZ0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 Ensembl:ENST00000557529 Uniprot:H0YIZ0
Length = 264
Score = 330 (121.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 68/125 (54%), Positives = 89/125 (71%)
Query: 162 SGLI---AGVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI GVK V KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 87 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 146
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA 277
F+ Y QV NA ++D +++RGY +V+GGTD HL+L+DLR L G++ E VLE ++I
Sbjct: 147 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSIT 206
Query: 278 CNKNT 282
NKNT
Sbjct: 207 ANKNT 211
Score = 128 (50.1 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 116 ALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
AL R + +GT+ Y+R +DYAR R++CDE + + ADM+HISGL+A
Sbjct: 10 ALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVA 60
>TIGR_CMR|CBU_1419 [details] [associations]
symbol:CBU_1419 "serine hydroxymethyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:NP_820403.1 ProteinModelPortal:Q83BT3 SMR:Q83BT3
PRIDE:Q83BT3 GeneID:1209325 KEGG:cbu:CBU_1419 PATRIC:17931591
OMA:SKELTGW BioCyc:CBUR227377:GJ7S-1406-MONOMER Uniprot:Q83BT3
Length = 419
Score = 225 (84.3 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 50/100 (50%), Positives = 64/100 (64%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
T+ D EL I+ E+ RQ + +ELIASEN+ S VLE GS L NKY+EG PG+RYYG
Sbjct: 7 TVESFDSELAGAIRDERRRQEHHVELIASENYVSPRVLELQGSVLTNKYAEGYPGRRYYG 66
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN 109
G +F+D E +A R+ + F D NVQP+SGS AN
Sbjct: 67 GCEFVDIAEQLAIDRAKELFGADY----ANVQPHSGSQAN 102
Score = 216 (81.1 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 43/102 (42%), Positives = 61/102 (59%)
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
+ E+++N+AVFP QGGP H I A A A +A EFK+Y Q+ NA +++ M +RG
Sbjct: 246 ELEKRLNSAVFPGSQGGPLMHIIAAKAVAFKEAMQPEFKTYAQQILKNAKAMAEVMKERG 305
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
Y +V+GGT HL L+ L ++G + E L I NKNT
Sbjct: 306 YTIVSGGTQNHLFLVSLLDKNISGKEAEAALGRANITVNKNT 347
Score = 85 (35.0 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-GV 168
+G + +S +D+ RFR+I D ++ D++H++GL+A GV
Sbjct: 172 AGFSAFSGIVDWQRFREIADSVNAYFMTDIAHVAGLVAAGV 212
>TIGR_CMR|CPS_0728 [details] [associations]
symbol:CPS_0728 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
RefSeq:YP_267478.1 ProteinModelPortal:Q488N6 SMR:Q488N6
STRING:Q488N6 PRIDE:Q488N6 GeneID:3519747 KEGG:cps:CPS_0728
PATRIC:21464771 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
OMA:AICAKFP BioCyc:CPSY167879:GI48-815-MONOMER GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 Uniprot:Q488N6
Length = 419
Score = 223 (83.6 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 54/109 (49%), Positives = 68/109 (62%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+A DPEL+ + E RQ IELIASEN+ S VLE GS L NKY+EG PGKRYYGG
Sbjct: 8 IATFDPELFEAMSNEVVRQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT 119
+++D E +A R+ + F NVQP++GS AN AV + AL T
Sbjct: 68 CEYVDIAEQLAIDRAKELFGATY----ANVQPHAGSQANAAVFQ-ALVT 111
Score = 211 (79.3 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 50/121 (41%), Positives = 70/121 (57%)
Query: 165 IAGVKG---VTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY 221
+AG +G ++ ++ +Y +K+N+AVFP QGGP H I A A A +A S EFK Y
Sbjct: 232 LAGPRGGLIISGCDDEAIY---KKLNSAVFPGGQGGPLMHIIAAKAVAFKEALSPEFKVY 288
Query: 222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
Q V ANA + D + RGY VV+ GT HL+L+DL +TG + L + I NKN
Sbjct: 289 QQNVLANALAMVDVLQDRGYKVVSNGTQNHLLLLDLIDKDITGKDADAALGKAHITVNKN 348
Query: 282 T 282
+
Sbjct: 349 S 349
Score = 91 (37.1 bits), Expect = 2.1e-41, Sum P(3) = 2.1e-41
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 125 DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+ + G + +S +D+AR R I D+ + F DM+H++GLIA
Sbjct: 169 EMIIGGFSAFSGVVDWARMRTIADKVGAYFFVDMAHVAGLIA 210
>TIGR_CMR|CPS_2477 [details] [associations]
symbol:CPS_2477 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_269193.1 ProteinModelPortal:Q481S6 SMR:Q481S6
STRING:Q481S6 PRIDE:Q481S6 GeneID:3520009 KEGG:cps:CPS_2477
PATRIC:21468023 BioCyc:CPSY167879:GI48-2540-MONOMER Uniprot:Q481S6
Length = 417
Score = 224 (83.9 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 49/102 (48%), Positives = 67/102 (65%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+A D ++ +++E RQ + +ELIASEN+TS V++ GS L NKY+EG PGKRYYGG
Sbjct: 8 IAGFDDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+ +D IE +A R+ + F D NVQP+SGS AN AV
Sbjct: 68 CEHVDVIEQLAIDRAKELFGADY----ANVQPHSGSQANAAV 105
Score = 195 (73.7 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 42/99 (42%), Positives = 57/99 (57%)
Query: 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV 243
+K+N+AVFP+ QGGP H I A A +A + + YQ QV NA ++ RGY+V
Sbjct: 250 KKLNSAVFPAGQGGPLMHVIAAKAICFKEALGEGYVEYQQQVIDNAREMAKTFQTRGYNV 309
Query: 244 VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
V+GGTD HL L+DL +TG + L I NKN+
Sbjct: 310 VSGGTDNHLFLLDLIDKGITGKDADAALGRANITVNKNS 348
Score = 100 (40.3 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + YSR +D+ RFR I D + +F DM+H++GL+A
Sbjct: 173 AGFSAYSRVVDWQRFRDIADSIGAWLFVDMAHVAGLVA 210
>TIGR_CMR|CPS_4031 [details] [associations]
symbol:CPS_4031 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_270689.1 ProteinModelPortal:Q47WY2 SMR:Q47WY2
STRING:Q47WY2 GeneID:3519081 KEGG:cps:CPS_4031 PATRIC:21470941
OMA:VKINAQV BioCyc:CPSY167879:GI48-4044-MONOMER Uniprot:Q47WY2
Length = 417
Score = 224 (83.9 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 49/102 (48%), Positives = 67/102 (65%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
+A D ++ +++E RQ + +ELIASEN+TS V++ GS L NKY+EG PGKRYYGG
Sbjct: 8 IAGFDDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
+ +D IE +A R+ + F D NVQP+SGS AN AV
Sbjct: 68 CEHVDVIEQLAIDRAKELFGADY----ANVQPHSGSQANAAV 105
Score = 195 (73.7 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 42/99 (42%), Positives = 57/99 (57%)
Query: 184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV 243
+K+N+AVFP+ QGGP H I A A +A + + YQ QV NA ++ RGY+V
Sbjct: 250 KKLNSAVFPAGQGGPLMHVIAAKAICFKEALGEGYVEYQQQVIDNAREMAKTFQTRGYNV 309
Query: 244 VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
V+GGTD HL L+DL +TG + L I NKN+
Sbjct: 310 VSGGTDNHLFLLDLIDKGITGKDADAALGRANITVNKNS 348
Score = 100 (40.3 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + YSR +D+ RFR I D + +F DM+H++GL+A
Sbjct: 173 AGFSAYSRVVDWQRFRDIADSIGAWLFVDMAHVAGLVA 210
>TIGR_CMR|DET_0436 [details] [associations]
symbol:DET_0436 "Serine hydroxymethyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_181180.1 ProteinModelPortal:Q3Z9B9 SMR:Q3Z9B9
STRING:Q3Z9B9 PRIDE:Q3Z9B9 GeneID:3230231 KEGG:det:DET0436
PATRIC:21607941 OMA:ERFRAIC BioCyc:DETH243164:GJNF-436-MONOMER
Uniprot:Q3Z9B9
Length = 415
Score = 220 (82.5 bits), Expect = 2.5e-40, Sum P(3) = 2.5e-40
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
L +DP +Y+ I +E R I+LIASEN+TS AVLE GS NKY+EG PGKRYY G
Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAG 63
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
++ D IE +A R+ F+ + NVQP+SG+ AN A
Sbjct: 64 CEYADAIEELAIDRAKTLFHAEH----ANVQPHSGAQANMA 100
Score = 187 (70.9 bits), Expect = 2.5e-40, Sum P(3) = 2.5e-40
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 182 YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY 241
Y + I+ AVFP +QGGP + A A A +A F +YQ ++ N +++E+ K G
Sbjct: 242 YAKAIDQAVFPVIQGGPLMQVVAAKAVAFQEAMQPGFVTYQKKILENTQVMAEELRKLGL 301
Query: 242 HVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
+V+GGTD HL+L+DL + G +L L I N+NT
Sbjct: 302 RLVSGGTDNHLVLVDLSPIGVNGYDAQLALRRAGIVINRNT 342
Score = 109 (43.4 bits), Expect = 2.5e-40, Sum P(3) = 2.5e-40
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA 166
+G + Y R LD+ RFR ICD+ D+ + D++HI+GL+A
Sbjct: 169 TGASAYPRILDFERFRAICDKVDAKLMVDIAHIAGLVA 206
>TIGR_CMR|APH_0154 [details] [associations]
symbol:APH_0154 "serine hydroxymethyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_504778.1 HSSP:P34897 ProteinModelPortal:Q2GLH3 SMR:Q2GLH3
STRING:Q2GLH3 GeneID:3930419 KEGG:aph:APH_0154 PATRIC:20948876
OMA:FKAYAHQ BioCyc:APHA212042:GHPM-189-MONOMER Uniprot:Q2GLH3
Length = 425
Score = 219 (82.2 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 49/110 (44%), Positives = 64/110 (58%)
Query: 175 GEKILYDYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231
G I+ D EE K+ +AVFP +QGG H I A A A +A S +FK Y +Q+ N+
Sbjct: 239 GGVIMTDDEEIHKKLRSAVFPGMQGGALMHVIAAKAVAFREAMSPDFKVYVSQILDNSRA 298
Query: 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
L+ + G VVTGGTD H++++DLR LTG V LE I CNKN
Sbjct: 299 LAAVLATGGLDVVTGGTDSHMVVVDLRSKGLTGRDVSSSLERAGIVCNKN 348
Score = 198 (74.8 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 46/102 (45%), Positives = 61/102 (59%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
++++D E+ + E RQ +++IASENF S AVL+ GS L NKY+EG PG RYY G
Sbjct: 10 ISESDAEVAECLSAEYKRQNTSLQMIASENFVSRAVLQAQGSVLTNKYAEGYPGSRYYCG 69
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPAN 109
+D E +A +R K F GC NVQP+SGS AN
Sbjct: 70 CSEVDVAETLAVERLCKLF-------GCKYANVQPHSGSQAN 104
Score = 93 (37.8 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 125 DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTG 175
+ + +G + Y R +D+ FR I D+ + AD++H SGLIAG + T G
Sbjct: 171 NLIIAGASSYPRRIDFKAFRAIADKVGAYFLADIAHYSGLIAGGQYPTPFG 221
>UNIPROTKB|G3V5L0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V5L0 SMR:G3V5L0 Ensembl:ENST00000554975
ArrayExpress:G3V5L0 Bgee:G3V5L0 Uniprot:G3V5L0
Length = 215
Score = 382 (139.5 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 129
Score = 52 (23.4 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYAR 142
PY +P + + AL R + +GT+ Y+R +DYAR
Sbjct: 173 PYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYAR 215
>UNIPROTKB|G3V4W5 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4W5 SMR:G3V4W5 Ensembl:ENST00000556689
ArrayExpress:G3V4W5 Bgee:G3V4W5 Uniprot:G3V4W5
Length = 237
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 86/172 (50%), Positives = 111/172 (64%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNA--RFDFL 127
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV L ++ D
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLP 167
Query: 128 SSGTTCYSRCLDYARFR-------------QICDETDSIMFADMSHISGLIA 166
G + D R +CDE + + ADM+HISGL+A
Sbjct: 168 DGGHLTHGYMSDVKRISATSIFFESMPYKLNVCDEVKAHLLADMAHISGLVA 219
>UNIPROTKB|G3V2Y4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006564 "L-serine biosynthetic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0051289 "protein homotetramerization" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0005743 GO:GO:0005758
GO:GO:0005759 GO:GO:0008284 GO:GO:0016597 GO:GO:0051289
GO:GO:0035999 GO:GO:0006564 GO:GO:0008732 GO:GO:0004372
PANTHER:PTHR11680 GO:GO:0019264 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 ProteinModelPortal:G3V2Y4 SMR:G3V2Y4
Ensembl:ENST00000555634 ArrayExpress:G3V2Y4 Bgee:G3V2Y4
Uniprot:G3V2Y4
Length = 234
Score = 287 (106.1 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 59/109 (54%), Positives = 78/109 (71%)
Query: 162 SGLI---AGVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE 217
SGLI GVK V KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA +
Sbjct: 126 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 185
Query: 218 FKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSK 266
F+ Y QV NA ++D +++RGY +V+GGTD HL+L+DLR L G++
Sbjct: 186 FREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGAR 234
Score = 130 (50.8 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + + AL R + +GT+ Y+R +DYAR R++CDE + + ADM+
Sbjct: 33 PYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMA 92
Query: 160 HISGLIA 166
HISGL+A
Sbjct: 93 HISGLVA 99
>UNIPROTKB|O53441 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA] [GO:0006563
"L-serine metabolic process" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0042783 "active evasion of
host immune response" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005886
GO:GO:0005737 GO:GO:0005618 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006544 GO:GO:0035999 GO:GO:0042783
GO:GO:0006545 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 PIR:C70896
RefSeq:NP_335569.1 RefSeq:YP_006514462.1 PDB:1LXB PDB:3H7F
PDBsum:1LXB PDBsum:3H7F ProteinModelPortal:O53441 SMR:O53441
PRIDE:O53441 EnsemblBacteria:EBMYCT00000001613
EnsemblBacteria:EBMYCT00000071670 GeneID:13319665 GeneID:924979
KEGG:mtc:MT1125 KEGG:mtu:Rv1093 KEGG:mtv:RVBD_1093 PATRIC:18124236
TubercuList:Rv1093 OMA:PETHRID ProtClustDB:PRK00011 BRENDA:2.1.2.1
EvolutionaryTrace:O53441 Uniprot:O53441
Length = 426
Score = 239 (89.2 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 56/134 (41%), Positives = 81/134 (60%)
Query: 11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
LA+ DP++ L+ KE RQ + +E+IASENF AVL+ GS L NKY+EGLPG+RYYGG
Sbjct: 5 LAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGG 64
Query: 71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARF---DFL 127
+ +D +E +A+ R+ F + NVQP+SG+ AN AV AL + R D
Sbjct: 65 CEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLH-ALMSPGERLLGLDLA 119
Query: 128 SSGTTCYSRCLDYA 141
+ G + L+++
Sbjct: 120 NGGHLTHGMRLNFS 133
Score = 198 (74.8 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 44/105 (41%), Positives = 61/105 (58%)
Query: 182 YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI---- 237
Y + IN+AVFP QGGP H I A A+ A + EF Q + + A ++D ++
Sbjct: 243 YAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDV 302
Query: 238 -KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
K G VV+GGTDVHL+L+DLR + L G E +L E+ I N+N
Sbjct: 303 AKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRN 347
Score = 98 (39.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 103 YSGSPANFAVCEKALPTNNARF--DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSH 160
Y PA + A+ F + +G + Y R LD+A FR I DE + + DM+H
Sbjct: 142 YGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAH 201
Query: 161 ISGLIA 166
+GL+A
Sbjct: 202 FAGLVA 207
>UNIPROTKB|J3KRZ5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA]
[GO:0016597 "amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] InterPro:IPR001085
InterPro:IPR015421 Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 EMBL:AC127537
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 Ensembl:ENST00000582653 Uniprot:J3KRZ5
Length = 167
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 73/111 (65%), Positives = 88/111 (79%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L +D E+Y++IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 17 SHDKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 76
Query: 62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
PG+RYYGG +FIDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV
Sbjct: 77 YPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAV 127
>UNIPROTKB|G3V241 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V241 SMR:G3V241 Ensembl:ENST00000557703
ArrayExpress:G3V241 Bgee:G3V241 Uniprot:G3V241
Length = 142
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 129
>UNIPROTKB|G3V2E4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2E4 SMR:G3V2E4 Ensembl:ENST00000557433
ArrayExpress:G3V2E4 Bgee:G3V2E4 Uniprot:G3V2E4
Length = 171
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 150
>UNIPROTKB|G3V2W0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2W0 SMR:G3V2W0 Ensembl:ENST00000554310
ArrayExpress:G3V2W0 Bgee:G3V2W0 Uniprot:G3V2W0
Length = 160
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 129
>UNIPROTKB|G3V3Y8 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2 SMR:G3V3Y8
Ensembl:ENST00000553529 Ensembl:ENST00000556737 Uniprot:G3V3Y8
Length = 147
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 129
>UNIPROTKB|G3V4T0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4T0 SMR:G3V4T0 Ensembl:ENST00000555773
ArrayExpress:G3V4T0 Bgee:G3V4T0 Uniprot:G3V4T0
Length = 149
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 129
>UNIPROTKB|G3V4X0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4X0 SMR:G3V4X0 Ensembl:ENST00000557427
ArrayExpress:G3V4X0 Bgee:G3V4X0 Uniprot:G3V4X0
Length = 159
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 129
>UNIPROTKB|G3V540 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
SMR:G3V540 Ensembl:ENST00000553837 Ensembl:ENST00000554604
Uniprot:G3V540
Length = 192
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 69/103 (66%), Positives = 86/103 (83%)
Query: 10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
+L+ +DPE++ L+++EK RQ G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 27 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 86
Query: 70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 87 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 129
>UNIPROTKB|J3KRK5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] InterPro:IPR001085 InterPro:IPR006155
InterPro:IPR015421 Pfam:PF00464 PROSITE:PS50957 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008242
GO:GO:0006544 EMBL:AC127537 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HGNC:HGNC:10850 ChiTaRS:SHMT1 EMBL:AL353997
ProteinModelPortal:J3KRK5 Ensembl:ENST00000580002 Uniprot:J3KRK5
Length = 128
Score = 197 (74.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 41/65 (63%), Positives = 48/65 (73%)
Query: 2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
S ML L +D E+Y++IKKE +RQ G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 17 SHDKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 76
Query: 62 LPGKR 66
PG+R
Sbjct: 77 YPGQR 81
>UNIPROTKB|I3LGT5 [details] [associations]
symbol:I3LGT5 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 EMBL:FP565227
Ensembl:ENSSSCT00000028049 Uniprot:I3LGT5
Length = 161
Score = 130 (50.8 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 102 PYSGSPANFAVC--EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
PY +P + + AL R + +GT+ Y+R +DYAR R++CDE + + ADM+
Sbjct: 33 PYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMA 92
Query: 160 HISGLIA 166
HISGL+A
Sbjct: 93 HISGLVA 99
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 337 337 0.00093 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 610 (65 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.78u 0.10s 28.88t Elapsed: 00:00:02
Total cpu time: 28.79u 0.10s 28.89t Elapsed: 00:00:02
Start: Thu Aug 15 11:09:40 2013 End: Thu Aug 15 11:09:42 2013