Your job contains 1 sequence.
>psy10677
MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAKWWDSNNGH
YPKSVRFVLGTAGFLLSAVSFSLPFRDDKTSVVTVPSYPDPSVNHLQGKTKEEIDSFRKE
HNITLIGQNIPKPVKTLDETNIPSYILGPMKPKTTNNENNHNKNKKCGDKESKNWTIPLN
FQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQ
AVISIFSRTMRIRHACLYGGTSKMYQVILLRILTSATNTSLGIYLQQNDAHSPCLSVWRR
LQDILGLTEETCVNVKD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10677
(317 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 283 3.7e-24 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 274 3.9e-23 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 256 3.3e-21 1
UNIPROTKB|J3QRQ7 - symbol:DDX5 "Probable ATP-dependent RN... 247 4.9e-21 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 251 1.5e-20 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 251 1.5e-20 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 246 3.2e-20 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 247 3.4e-20 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 246 3.7e-20 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 246 3.7e-20 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 247 4.1e-20 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 247 4.1e-20 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 247 4.1e-20 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 247 4.1e-20 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 247 4.1e-20 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 247 4.1e-20 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 247 5.0e-20 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 246 5.4e-20 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 243 1.0e-19 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 243 1.1e-19 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 242 3.1e-19 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 232 2.3e-18 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 227 5.5e-18 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 229 6.1e-18 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 224 1.5e-17 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 223 1.8e-17 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 223 1.8e-17 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 223 1.8e-17 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 223 1.8e-17 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 223 2.2e-17 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 223 2.2e-17 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 223 2.2e-17 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 223 2.2e-17 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 177 2.9e-17 2
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 220 1.0e-16 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 216 4.6e-16 1
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 208 3.4e-14 1
UNIPROTKB|D6RJA6 - symbol:DDX46 "Probable ATP-dependent R... 166 1.0e-12 2
UNIPROTKB|J3KRZ1 - symbol:DDX5 "Probable ATP-dependent RN... 170 1.5e-12 1
UNIPROTKB|J3QSF1 - symbol:DDX5 "Probable ATP-dependent RN... 170 1.5e-12 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 194 1.8e-12 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 190 2.1e-12 1
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 189 6.5e-12 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 166 1.0e-11 2
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 166 1.1e-11 2
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 166 1.1e-11 2
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 166 1.1e-11 2
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 166 1.1e-11 2
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 166 1.1e-11 2
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 186 1.7e-11 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 166 2.1e-11 2
UNIPROTKB|I3LNN1 - symbol:DDX23 "Uncharacterized protein"... 182 3.4e-11 1
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 182 3.5e-11 1
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 182 3.5e-11 1
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 182 3.5e-11 1
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 182 3.5e-11 1
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 182 4.6e-11 1
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 172 5.3e-11 2
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 164 2.1e-10 2
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A... 175 2.3e-10 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 176 2.3e-10 1
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 174 3.1e-10 1
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 170 4.6e-10 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 172 4.6e-10 1
DICTYBASE|DDB_G0281925 - symbol:DDB_G0281925 "DEAD/DEAH b... 151 5.8e-10 2
DICTYBASE|DDB_G0277857 - symbol:helB2 "putative U5 small ... 171 7.0e-10 1
GENEDB_PFALCIPARUM|PFE0430w - symbol:PFE0430w "ATP-depend... 169 2.4e-09 1
UNIPROTKB|Q8I416 - symbol:PFE0430w "ATP-dependent RNA Hel... 169 2.4e-09 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 163 3.8e-09 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 165 4.5e-09 1
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 161 6.8e-09 1
WB|WBGene00017162 - symbol:ddx-23 species:6239 "Caenorhab... 159 1.4e-08 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 156 3.0e-08 1
ASPGD|ASPL0000051195 - symbol:AN1634 species:162425 "Emer... 154 5.6e-08 1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 134 5.9e-08 2
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 153 9.1e-08 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 153 9.1e-08 1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 153 9.1e-08 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 153 9.2e-08 1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 153 9.2e-08 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 153 9.3e-08 1
POMBASE|SPCC63.11 - symbol:prp28 "U5 snRNP-associated pro... 151 9.7e-08 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 150 1.4e-07 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 150 2.0e-07 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 150 2.0e-07 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 150 2.0e-07 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 146 4.2e-07 2
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 146 4.7e-07 1
ASPGD|ASPL0000069536 - symbol:AN7424 species:162425 "Emer... 143 4.9e-07 1
DICTYBASE|DDB_G0293064 - symbol:DDB_G0293064 species:4468... 141 1.1e-06 1
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 145 1.2e-06 2
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 139 3.2e-06 1
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 139 3.2e-06 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 134 1.6e-05 1
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 133 1.8e-05 1
WB|WBGene00013214 - symbol:Y54G11A.3 species:6239 "Caenor... 128 2.5e-05 1
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 93 2.8e-05 2
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 128 2.9e-05 2
GENEDB_PFALCIPARUM|PFE0925c - symbol:PFE0925c "snrnp prot... 128 7.3e-05 1
UNIPROTKB|Q8I0W7 - symbol:PFE0925c "Snrnp protein, putati... 128 7.3e-05 1
WARNING: Descriptions of 11 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 283 (104.7 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 61/159 (38%), Positives = 88/159 (55%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
+++ E+D FR+EH++ + G ++PKPV+T DE P Y++ +
Sbjct: 99 RSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAI------- 151
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
+S+ W P+ + + + AE S TY LPA+ HI P L GDGPI L+
Sbjct: 152 --QSQGW--PMALSGRDVVGI----AETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLI 203
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELA QIQA IS F ++ RIR+ C+YGG K Q+
Sbjct: 204 LAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQI 242
Score = 150 (57.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEK 49
MWSATWP+E++ +A +FL D IQ+N+GS +L+AN I Q VE+ E EK
Sbjct: 308 MWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEK 356
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 274 (101.5 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 60/159 (37%), Positives = 88/159 (55%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
+++ E+D FRK+ +T+ G+++P+PV+T DE P Y+L +
Sbjct: 114 RSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAI------- 166
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
+S+ W P+ + + + AE S +Y LPA+ HI P L GDGPI L+
Sbjct: 167 --QSQGW--PMALSGRDVVGI----AETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLI 218
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELA QIQA IS F ++ RIR+ C+YGG K Q+
Sbjct: 219 LAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQI 257
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 27/49 (55%), Positives = 40/49 (81%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEK 49
MWSATWP+E+++LA +FL++ IQ+N+GS +L+AN I Q VE+ E+EK
Sbjct: 323 MWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEK 371
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 256 (95.2 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 61/167 (36%), Positives = 83/167 (49%)
Query: 103 VNH--LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXX 160
V H ++ ++ EI FRKE+ +T+ G +IPKP+ T DE P Y+L +
Sbjct: 79 VEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTG 138
Query: 161 XXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEE 220
C + W P+ + + + A S +Y LP + HI P L
Sbjct: 139 IQ----C-----QGW--PMALSGRDMVGI----AATGSGKTLSYCLPGIVHINAQPLLAP 183
Query: 221 GDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
GDGPI LVLAPTRELA QIQ S F + RIR+ C+YGG K Q+
Sbjct: 184 GDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQI 230
Score = 159 (61.0 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 27/49 (55%), Positives = 40/49 (81%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEK 49
MWSATWP+E+++LA ++L+DPIQ+ VGS L+A+ NI Q VE+ ++EK
Sbjct: 296 MWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEK 344
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 251 (93.4 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 57/162 (35%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E+D++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 251 (93.4 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 57/162 (35%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E+D++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 246 (91.7 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 58/158 (36%), Positives = 82/158 (51%)
Query: 110 TKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGD 169
T E++ +RK IT+ G++IPKPVK+ + P Y+L +
Sbjct: 74 TDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPI-------- 125
Query: 170 KESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVL 229
+S+ W P+ + + I + AE S +Y+LPA+ H+ P L GDGPI LVL
Sbjct: 126 -QSQGW--PMAMKGRDLIGI----AETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVL 178
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
APTRELA QIQ S F + +I+ C+YGG K QV
Sbjct: 179 APTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQV 216
Score = 132 (51.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 22/48 (45%), Positives = 38/48 (79%)
Query: 2 WSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEK 49
WSATWP+E+++L+K+FL +P ++ +GS++L AN I+Q V++ E +K
Sbjct: 283 WSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQK 330
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 247 (92.0 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 58/159 (36%), Positives = 83/159 (52%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
++ +I+ FRKE+ +T+ G +IP P+ T DE P Y+L + C
Sbjct: 101 RSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQ----C- 155
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
+ W P+ + I + A S +Y LP++ HI P+L+ GDGPI LV
Sbjct: 156 ----QGW--PMALSGRDMIGI----AATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLV 205
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELA QIQ S F ++ RIR+ C+YGG K Q+
Sbjct: 206 LAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQI 244
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEK 49
MWSATWP+E+Q+L +++L+DPIQ+ +GS LAA+ I Q VE+ E+ K
Sbjct: 310 MWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSK 358
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 246 (91.7 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 59/161 (36%), Positives = 84/161 (52%)
Query: 112 EEIDSFRKEHNITLI-GQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDK 170
+E+ R +H IT++ G+N+PKPV ++++ P Y++ +
Sbjct: 89 KEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPI--------- 139
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLA 230
+ + W I L+ K I KAE S +ILPA HIL P L+ GDGPI LVLA
Sbjct: 140 QIQGWPIALS--GKDMIG----KAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLA 193
Query: 231 PTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
PTRELA+QI+ FS +IR+ C YGG K Q+ L+
Sbjct: 194 PTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALK 234
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 1 MWSATWPREIQKLAKEFLSD-PIQLNVGSANLAANPNIKQFVEICHEYEK 49
MWSATWP+E+Q LAK+ + PIQ+NVGS L A +IKQ + + E+EK
Sbjct: 296 MWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEK 345
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 246 (91.7 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 59/161 (36%), Positives = 84/161 (52%)
Query: 112 EEIDSFRKEHNITLI-GQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDK 170
+E+ R +H IT++ G+N+PKPV ++++ P Y++ +
Sbjct: 89 KEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPI--------- 139
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLA 230
+ + W I L+ K I KAE S +ILPA HIL P L+ GDGPI LVLA
Sbjct: 140 QIQGWPIALS--GKDMIG----KAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLA 193
Query: 231 PTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
PTRELA+QI+ FS +IR+ C YGG K Q+ L+
Sbjct: 194 PTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALK 234
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 1 MWSATWPREIQKLAKEFLSD-PIQLNVGSANLAANPNIKQFVEICHEYEK 49
MWSATWP+E+Q LAK+ + PIQ+NVGS L A +IKQ + + E+EK
Sbjct: 296 MWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEK 345
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 65 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 120
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 121 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 169
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 170 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 211
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 277 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 328
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 247 (92.0 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 56/162 (34%), Positives = 85/162 (52%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
L +T +E++++R+ IT+ G N PKPV E N P+ ++ +
Sbjct: 122 LARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI---- 177
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI
Sbjct: 178 -----QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPI 226
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 227 CLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 268
Score = 170 (64.9 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 334 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 385
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 246 (91.7 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 58/164 (35%), Positives = 86/164 (52%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
++ +E++ +R+ IT+ G++ PKP+ E N P Y++ +
Sbjct: 70 RSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVIT----------------- 112
Query: 169 DKESKNWTIPLNFQAKKFISVLQKK-----AEVQSRSVFTYILPALYHILKMPKLEEGDG 223
+NWT P QA+ + L K A+ S +Y+LPA+ HI P LE GDG
Sbjct: 113 ---KQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDG 169
Query: 224 PIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
PI LVLAPTRELAQQ+Q V + + + RI+ C+YGG K Q+
Sbjct: 170 PICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQI 213
Score = 162 (62.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 28/52 (53%), Positives = 42/52 (80%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL + IQ+NVG+ L+AN NI Q V++C++ EK K
Sbjct: 279 MWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDK 330
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 243 (90.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 54/159 (33%), Positives = 83/159 (52%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
+T +E++ +R +T+ G N PKP+ E N P+ ++ +
Sbjct: 56 RTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAI------- 108
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI LV
Sbjct: 109 --QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV 160
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + +SR R++ C+YGG K Q+
Sbjct: 161 LAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQI 199
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 26/52 (50%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL + + +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 265 MWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDK 316
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 243 (90.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 54/159 (33%), Positives = 83/159 (52%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
+T +E++ +R +T+ G N PKP+ E N P+ ++ +
Sbjct: 64 RTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAI------- 116
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
+++ W + L+ + V A+ S +Y+LPA+ HI P LE GDGPI LV
Sbjct: 117 --QAQGWPVALS--GLDMVGV----AQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV 168
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + +SR R++ C+YGG K Q+
Sbjct: 169 LAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQI 207
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 26/52 (50%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL + + +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 273 MWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDK 324
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 242 (90.2 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 54/160 (33%), Positives = 90/160 (56%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
K+++++ R+E IT+ G +P PV + +E+++P++++ M
Sbjct: 211 KSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAI------- 263
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
+S+ W I L+ + + + A+ S Y+LPA+ HI P + G+GPIALV
Sbjct: 264 --QSQGWPIALS--GRDLVGI----AQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIALV 315
Query: 229 LAPTRELAQQIQAVISIFSRTMR--IRHACLYGGTSKMYQ 266
LAPTRELAQQIQ+V+ + + IRH C++GG+SK+ Q
Sbjct: 316 LAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQ 355
Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+Q LA +FL+D IQ+N+GS NL+AN NI+Q VEIC E EKP +
Sbjct: 422 MWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQR 473
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 232 (86.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 52/159 (32%), Positives = 83/159 (52%)
Query: 105 HLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXX 164
++ ++ E+ +R+E IT+ GQ +P P++ E ++P Y++ +
Sbjct: 252 NVANRSPYEVQRYREEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAI--- 307
Query: 165 XXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGP 224
+++ W P+ F+ + A+ S YILPA+ HI L+ GDGP
Sbjct: 308 ------QAQGW--PIAMSGSNFVGI----AKTGSGKTLGYILPAIVHINNQQPLQRGDGP 355
Query: 225 IALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSK 263
IALVLAPTRELAQQIQ V + F + +R+ C++GG K
Sbjct: 356 IALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPK 394
Score = 169 (64.5 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 28/52 (53%), Positives = 42/52 (80%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL + IQ+N+GS L+AN NI+Q V++C E+ K K
Sbjct: 464 MWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEK 515
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 227 (85.0 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXX 165
+Q T++++ +R E +I++ G+++PKP+K + N P IL +
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPI---- 191
Query: 166 XCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPI 225
+++ W P+ + + I + AE S Y+LPAL H+ P+L + DGPI
Sbjct: 192 -----QAQGW--PMALKGRDLIGI----AETGSGKTLAYLLPALVHVSAQPRLGQDDGPI 240
Query: 226 ALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
L+LAPTRELA QIQ F +R C+YGG K Q+ LR
Sbjct: 241 VLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEK 49
+WSATWPRE++ LA++FL DP + +GS +L AN +I Q +EI EK
Sbjct: 348 LWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEK 396
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 229 (85.7 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 53/158 (33%), Positives = 77/158 (48%)
Query: 109 KTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
+T E ++F + IT+ G +P P +E P Y++ +
Sbjct: 131 RTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAI------- 183
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
+++ W P+ + + V A+ S Y+LPA+ HI P+LE GDGPIALV
Sbjct: 184 --QAQGW--PIAMSGRDLVGV----AQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALV 235
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQ 266
LAPTRELAQQIQ V F +R+ C++GG K Q
Sbjct: 236 LAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQ 273
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 30/52 (57%), Positives = 43/52 (82%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA+EFL++ IQ+N+GS +L+AN NI Q V++C E EK K
Sbjct: 340 MWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMK 391
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 224 (83.9 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 50/155 (32%), Positives = 78/155 (50%)
Query: 113 EIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDKES 172
+++ +R++ IT+ G PKPV + P Y++ + ++
Sbjct: 73 DVEEYRRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAI---------QA 123
Query: 173 KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPT 232
+ + PL + + + A+ S Y+LPA+ HI P LE GDGPI LVLAPT
Sbjct: 124 QGF--PLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT 177
Query: 233 RELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
RELAQQ+Q V + ++ RI+ C+YGG K Q+
Sbjct: 178 RELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQI 212
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D +Q+N+G+ L+AN NI Q V++C E EK K
Sbjct: 278 MWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNK 329
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 66 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 121
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 122 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 170
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 171 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 209
Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 275 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 326
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 66 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 121
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 122 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 170
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 171 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 209
Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 275 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 326
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 66 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 121
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 122 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 170
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 171 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 209
Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 275 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 326
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 66 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 121
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 122 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 170
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 171 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 209
Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 275 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 326
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 223 (83.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 145 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 200
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 201 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 249
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 250 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 288
Score = 161 (61.7 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 354 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 405
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 223 (83.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 145 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 200
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 201 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 249
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 250 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 288
Score = 161 (61.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 354 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 405
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 223 (83.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 147 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 202
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 203 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 251
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 252 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 290
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 356 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 407
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 223 (83.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 147 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 202
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 203 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 251
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 252 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 290
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 356 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 407
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 177 (67.4 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 36/70 (51%), Positives = 45/70 (64%)
Query: 198 SRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACL 257
S +Y LPA+ HI P L GDGPI LVLAPTRELA QIQ + F ++ RIR+ C+
Sbjct: 170 SGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCV 229
Query: 258 YGGTSKMYQV 267
YGG + Q+
Sbjct: 230 YGGVPRGPQI 239
Score = 151 (58.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 28/52 (53%), Positives = 42/52 (80%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
M+SATWP+E+Q+LA+++L+D IQ+ VGS +LAA+ NIKQ VE+ +K A+
Sbjct: 305 MFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRAR 356
Score = 100 (40.3 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 86 RDDKTSVVTVPSYPDPSVNH--LQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIP 143
+D K + +P D H ++ ++ E+ +RKE I + G N+PKPV T +E P
Sbjct: 72 KDWKNETL-IPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFP 130
Query: 144 SYIL 147
+Y+L
Sbjct: 131 NYVL 134
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 220 (82.5 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 54/162 (33%), Positives = 81/162 (50%)
Query: 110 TKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGD 169
T+EEI+ FR +T+ G+ +P P+ + P Y++ +
Sbjct: 359 TQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPI-------- 410
Query: 170 KESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVL 229
+S+ W P+ + + I + A+ S ++LP++ HI P L E DGPI LVL
Sbjct: 411 -QSQAW--PIALKGRDIIGL----AKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVL 463
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
APTRELA QIQ + F T +I + C+YGG SK QV L+
Sbjct: 464 APTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALK 505
Score = 161 (61.7 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 26/49 (53%), Positives = 40/49 (81%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEK 49
M+SATWP+E+Q LA +FL+D IQ+++GS + AN N++Q VE+C ++EK
Sbjct: 567 MFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEK 615
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 216 (81.1 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 52/159 (32%), Positives = 76/159 (47%)
Query: 110 TKEEIDSFRKEHNITLIG-QNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E++ R++ IT+ G + PKPV + + P Y++ + C
Sbjct: 64 TPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQ----CQ 119
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI LV
Sbjct: 120 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLV 168
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LAPTRELAQQ+Q V + + R++ C+YGG K Q+
Sbjct: 169 LAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQI 207
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/52 (55%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D +Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 273 MWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHK 324
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 208 (78.3 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 54/169 (31%), Positives = 85/169 (50%)
Query: 103 VNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXX 162
V + T+EE++++RKE + + G+++P+P+K +T + S IL M
Sbjct: 497 VKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEK----- 551
Query: 163 XXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGD 222
+ +P+ + I V A+ S ++LP L HI P +E GD
Sbjct: 552 ------PMPIQTQALPIIMSGRDCIGV----AKTGSGKTLGFVLPMLRHIKDQPPVEAGD 601
Query: 223 GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
GPI LV+APTREL QQI + I FS+ + IR +YGG+ Q+ L+
Sbjct: 602 GPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELK 650
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 166 (63.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 368 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 427
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 428 VVCVYGGTGISEQIAELK 445
Score = 67 (28.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L ++EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 291 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 339
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 170 (64.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 115 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 166
Score = 148 (57.2 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 219 EEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
E GDGPI LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 1 ERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 49
>UNIPROTKB|J3QSF1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000579996
Uniprot:J3QSF1
Length = 153
Score = 170 (64.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 63 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 114
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 194 (73.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 55/170 (32%), Positives = 82/170 (48%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
V L T+EE++ +R E IT+ G+ PKP+KT + I IL +
Sbjct: 338 VPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPI 397
Query: 162 XXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEG 221
+S+ IP + I + A+ S ++LP HI+ LEEG
Sbjct: 398 ---------QSQ--AIPAIMNGRDLIGI----AKTGSGKTIAFLLPMFRHIMDQRALEEG 442
Query: 222 DGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
+GPIA+++ PTRELA QI FS+T+ +R C+YGGT Q+ L+
Sbjct: 443 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELK 492
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 190 (71.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 49/151 (32%), Positives = 74/151 (49%)
Query: 113 EIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDKES 172
EID + + +TL G+ +P+PV +E +P I + +S
Sbjct: 108 EIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGKFQKPTVI----------QS 157
Query: 173 KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPT 232
+W P+ + IS+ A+ S ++LPAL HI K + G+GP LVL PT
Sbjct: 158 ISW--PIAMSGRDIISI----AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPT 211
Query: 233 RELAQQIQAVISIFSRTMRIRHACLYGGTSK 263
RELAQQ+Q V F ++ ++ CL+GG SK
Sbjct: 212 RELAQQVQEVSIDFCHSLGLKMTCLFGGASK 242
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
M+SATWP+E++ LA +F D LNVGS LAAN NI Q V+I E+ K AK
Sbjct: 312 MFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAK 363
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 189 (71.6 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 50/163 (30%), Positives = 79/163 (48%)
Query: 110 TKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
TK E+ ++R+E +IT+ G + PKP+KT + + ++ +
Sbjct: 278 TKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQA--- 334
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
IP + I + A+ S ++LP HIL P+LEEGDGPIA++
Sbjct: 335 --------IPSIMSGRDVIGI----AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
LAPTRELA Q + F++ + ++ AC YGG Q+ L+
Sbjct: 383 LAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLK 425
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 166 (63.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 475
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 476 VVCVYGGTGISEQIAELK 493
Score = 67 (28.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L ++EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 339 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 387
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 166 (63.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 475
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 476 VVCVYGGTGISEQIAELK 493
Score = 67 (28.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L ++EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 339 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 387
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 166 (63.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 475
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 476 VVCVYGGTGISEQIAELK 493
Score = 67 (28.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L ++EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 339 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 387
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 166 (63.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 475
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 476 VVCVYGGTGISEQIAELK 493
Score = 67 (28.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L ++EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 339 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 387
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 166 (63.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 475
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 476 VVCVYGGTGISEQIAELK 493
Score = 67 (28.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L ++EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 339 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 387
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 166 (63.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 475
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 476 VVCVYGGTGISEQIAELK 493
Score = 67 (28.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L ++EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 339 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 387
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 186 (70.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 46/150 (30%), Positives = 76/150 (50%)
Query: 114 IDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDKESK 173
++ +RK+H +T G+NIP P T + + +P IL + +++
Sbjct: 414 VEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPI---------QAQ 464
Query: 174 NWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTR 233
W P+ Q++ +++ A+ S Y++PA + +L+ + + +GP L+LAPTR
Sbjct: 465 TW--PIALQSRDIVAI----AKTGSGKTLGYLIPA-FILLRHCRNDSRNGPTVLILAPTR 517
Query: 234 ELAQQIQAVISIFSRTMRIRHACLYGGTSK 263
ELA QIQ F R+ RI CLYGG K
Sbjct: 518 ELATQIQDEALRFGRSSRISCTCLYGGAPK 547
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/50 (46%), Positives = 38/50 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSAN-LAANPNIKQFVEICHEYEK 49
M++ATWP+E++K+A + L +P+Q+N+G + LAAN I Q+VE+ + EK
Sbjct: 617 MYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEK 666
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 166 (63.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI+ LEEG+GPIA+++ PTRELA QI FS+T+ +R
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLR 475
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 476 VVCVYGGTGISEQIAELK 493
Score = 64 (27.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPM 150
V L + EE++ FR E IT+ G+ PKP+K+ + I IL +
Sbjct: 339 VPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSL 387
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 182 (69.1 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 57/178 (32%), Positives = 87/178 (48%)
Query: 102 SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
S L T + FR++++IT G IP P+++ ++++P +IL +
Sbjct: 358 SQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDK--------- 408
Query: 162 XXXXXCGDKES---KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKL 218
CG KE + IP+ Q + I V AE S +++P L I +PK+
Sbjct: 409 -----CGYKEPTPIQRQAIPIGLQNRDIIGV----AETGSGKTAAFLIPLLVWITTLPKI 459
Query: 219 ---EEGD-GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
EE D GP A++LAPTRELAQQI+ F + + IR + GG S+ Q LR+
Sbjct: 460 DRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRPVAVIGGISREDQGFRLRM 517
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 182 (69.1 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 57/178 (32%), Positives = 87/178 (48%)
Query: 102 SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
S L T + FR++++IT G IP P+++ ++++P +IL +
Sbjct: 357 SQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDK--------- 407
Query: 162 XXXXXCGDKES---KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKL 218
CG KE + IP+ Q + I V AE S +++P L I +PK+
Sbjct: 408 -----CGYKEPTPIQRQAIPIGLQNRDIIGV----AETGSGKTAAFLIPLLVWITTLPKI 458
Query: 219 ---EEGD-GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
EE D GP A++LAPTRELAQQI+ F + + IR + GG S+ Q LR+
Sbjct: 459 DRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRM 516
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 182 (69.1 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 57/178 (32%), Positives = 87/178 (48%)
Query: 102 SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
S L T + FR++++IT G IP P+++ ++++P +IL +
Sbjct: 358 SQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDK--------- 408
Query: 162 XXXXXCGDKES---KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKL 218
CG KE + IP+ Q + I V AE S +++P L I +PK+
Sbjct: 409 -----CGYKEPTPIQRQAIPIGLQNRDIIGV----AETGSGKTAAFLIPLLVWITTLPKI 459
Query: 219 ---EEGD-GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
EE D GP A++LAPTRELAQQI+ F + + IR + GG S+ Q LR+
Sbjct: 460 DRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRM 517
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 182 (69.1 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 57/178 (32%), Positives = 87/178 (48%)
Query: 102 SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
S L T + FR++++IT G IP P+++ ++++P +IL +
Sbjct: 358 SQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDK--------- 408
Query: 162 XXXXXCGDKES---KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKL 218
CG KE + IP+ Q + I V AE S +++P L I +PK+
Sbjct: 409 -----CGYKEPTPIQRQAIPIGLQNRDIIGV----AETGSGKTAAFLIPLLVWITTLPKI 459
Query: 219 ---EEGD-GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
EE D GP A++LAPTRELAQQI+ F + + IR + GG S+ Q LR+
Sbjct: 460 DRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRM 517
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 182 (69.1 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 57/178 (32%), Positives = 87/178 (48%)
Query: 102 SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
S L T + FR++++IT G IP P+++ ++++P +IL +
Sbjct: 358 SQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDK--------- 408
Query: 162 XXXXXCGDKES---KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKL 218
CG KE + IP+ Q + I V AE S +++P L I +PK+
Sbjct: 409 -----CGYKEPTPIQRQAIPIGLQNRDIIGV----AETGSGKTAAFLIPLLVWITTLPKI 459
Query: 219 ---EEGD-GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
EE D GP A++LAPTRELAQQI+ F + + IR + GG S+ Q LR+
Sbjct: 460 DRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRM 517
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 182 (69.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 103 VNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXX 162
V + T++ ++++RKE + + G+++P+P++ +T + S IL +
Sbjct: 364 VKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQ 423
Query: 163 XXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGD 222
+P+ + I V A+ S ++LP L HI P +E GD
Sbjct: 424 AQA-----------LPIIMSGRDCIGV----AKTGSGKTLGFVLPMLRHIKDQPPVEAGD 468
Query: 223 GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
GPI LV+APTREL QQI + I FS+ + I +YGG+ Q+ L+
Sbjct: 469 GPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELK 517
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 172 (65.6 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S +ILP HIL P +E+GDG IA+++APTREL QI I FS+++ +R
Sbjct: 554 AKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLR 613
Query: 254 HACLYGGTSKMYQVILLR 271
C+YGGT Q+ L+
Sbjct: 614 PVCVYGGTGISEQIAELK 631
Score = 55 (24.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 77 SAVSFSLPFRDDKTSVVTVPSYPDPSVNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVK 135
S+V+++ PFR K V VP L T +++ +R + I + G+ PKP+K
Sbjct: 462 SSVTYA-PFR--KNFYVEVPE--------LTRMTAADVEKYRSDLEGIQVKGKGCPKPIK 510
Query: 136 T 136
T
Sbjct: 511 T 511
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 164 (62.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 37/96 (38%), Positives = 51/96 (53%)
Query: 176 TIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTREL 235
TIP + I + A S ++LP HIL PK G+G IAL+++PTREL
Sbjct: 539 TIPAIMNGRDLIGI----ARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTREL 594
Query: 236 AQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
A QI FS+ + +R AC+YGG S Q+ L+
Sbjct: 595 ALQIHVECKKFSKVLGLRTACVYGGASISEQIAELK 630
Score = 58 (25.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQNIPKPVKT 136
L T+ E+ FR E + + G++ PKP+++
Sbjct: 480 LANMTETEVLDFRSELGVKITGKDCPKPIQS 510
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 56/178 (31%), Positives = 85/178 (47%)
Query: 102 SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
S L T + FR++++IT G IP P++ E ++P +IL +
Sbjct: 345 SQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEK--------- 395
Query: 162 XXXXXCGDKES---KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKL 218
CG K+ + IP+ Q + I V AE S +++P L I +PK+
Sbjct: 396 -----CGYKDPTPIQRQAIPIGLQNRDIIGV----AETGSGKTAAFLIPLLVWITTLPKI 446
Query: 219 ---EEGD-GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
E+ D GP A++LAPTRELAQQI+ F + + IR + GG S+ Q LR+
Sbjct: 447 DRIEDSDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRM 504
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 176 (67.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 48/157 (30%), Positives = 75/157 (47%)
Query: 110 TKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGD 169
T+E++ RK +I + G ++ PV + +L +
Sbjct: 280 TEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPI-------Q 332
Query: 170 KESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVL 229
K++ IP+ + I++ A+ S T+I P++ HI+ P LE+GDGPIAL L
Sbjct: 333 KQA----IPIALSGRDLIAI----AKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFL 384
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQ 266
APTRELA QI +S+ +++ LYGG SK Q
Sbjct: 385 APTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQ 421
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 53/170 (31%), Positives = 85/170 (50%)
Query: 110 TKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGD 169
T+ + FR+++N+T+ G IP P+++ +E+ P I+ + G
Sbjct: 369 TERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKV--------------GY 414
Query: 170 KES---KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPK---LEEGD- 222
KE + IP+ Q + I V AE S +++P L I +PK LE+ D
Sbjct: 415 KEPTPIQRQAIPIGLQNRDIIGV----AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQ 470
Query: 223 GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
GP A+++APTRELAQQI+ + F + + IR + GG S+ Q LR+
Sbjct: 471 GPYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRL 520
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 170 (64.9 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D I +N+G+ L+AN NI Q V++CH+ EK K
Sbjct: 198 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 249
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 221 GDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
GDGPI LVLAPTRELAQQ+Q V + + R R++ C+YGG K Q+
Sbjct: 86 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQI 132
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 172 (65.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 88 DKTSVVTVPSYPD--PSVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSY 145
D +S+ P D + + G T++E +R+ I + G ++ +PVKT ++ S
Sbjct: 179 DHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQ 238
Query: 146 ILGPMXXXXXXXXXXXXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYI 205
I+ + C +P+ + I + A+ S ++
Sbjct: 239 IMSAIKKQAYEKPTAIQ----CQ-------ALPIVLSGRDVIGI----AKTGSGKTAAFV 283
Query: 206 LPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMY 265
LP + HI+ P+L+ +GPI ++ APTRELA QI FS+ +R + +YGG SK
Sbjct: 284 LPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHE 343
Query: 266 Q 266
Q
Sbjct: 344 Q 344
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 151 (58.2 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 39/97 (40%), Positives = 51/97 (52%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEE-GDGPIALVLAPTRELAQQIQAVISIFSRTMRI 252
A S ++LPAL I+ +PK G P+ LV+APTRELAQQI+ V R I
Sbjct: 154 AATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSI 213
Query: 253 RHACLYGGTSKMYQVILLRILTSATNTSLGIYLQQND 289
R C YGG K+ Q RIL + + +G + ND
Sbjct: 214 RQLCAYGGLGKIDQS---RILRNGVDIVIGTPGRLND 247
Score = 115 (45.5 bits), Expect = 0.00090, P = 0.00090
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFV 41
M+SATWP+E++ LA +FL DPI++ VGS L + N+ Q +
Sbjct: 292 MFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHI 332
Score = 61 (26.5 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 87 DDKTSVVTVPSYPDPSVNHLQGKTKEEI----DSFRKEHNITLIGQNIPKPVKTLDETNI 142
++K S S + ++ +TKE+I +RK+HN+ + G++ P P + +
Sbjct: 60 EEKKSEKKSSSSKEDKEEEVKEETKEDIVLSPTEWRKKHNVLIEGKSQPNPFQKFTDYEF 119
Query: 143 P 143
P
Sbjct: 120 P 120
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 171 (65.3 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 56/183 (30%), Positives = 86/183 (46%)
Query: 95 VPSYPDP--SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXX 152
+ PD S L+ TK + F+++ NI+ G P P++T E+N+P IL +
Sbjct: 371 ISELPDTHWSKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQ 430
Query: 153 XXXXXXXXXXXXXXCGDKES--KNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALY 210
+K S + +IP++ + + + AE S +++P L
Sbjct: 431 LGY-------------EKPSPIQMQSIPISLTGRDILGI----AETGSGKTCAFVIPMLI 473
Query: 211 HILKMPKLE---EGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTS---KM 264
+I K P+L E DGP ALV+APTREL QQI+ F++ R L GG S +
Sbjct: 474 YISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQA 533
Query: 265 YQV 267
YQV
Sbjct: 534 YQV 536
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 103 VNHLQGKTKEEIDSFRKEH-NITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
V + ++D FRK + NI + G+N P+PV+ + +PS IL +
Sbjct: 690 VKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNI 749
Query: 162 XXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEG 221
TIP + I++ AE S +Y+ P + H+L L
Sbjct: 750 QMQ-----------TIPALMCGRDVIAI----AETGSGKTLSYLFPVIRHVLHQEPLRNN 794
Query: 222 DGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
DGPI+++L PTREL+ Q++ I+ + + I +YGG++ Q+ +L+
Sbjct: 795 DGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLK 844
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 103 VNHLQGKTKEEIDSFRKEH-NITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
V + ++D FRK + NI + G+N P+PV+ + +PS IL +
Sbjct: 690 VKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNI 749
Query: 162 XXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEG 221
TIP + I++ AE S +Y+ P + H+L L
Sbjct: 750 QMQ-----------TIPALMCGRDVIAI----AETGSGKTLSYLFPVIRHVLHQEPLRNN 794
Query: 222 DGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
DGPI+++L PTREL+ Q++ I+ + + I +YGG++ Q+ +L+
Sbjct: 795 DGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLK 844
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 163 (62.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 115 DSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDKESKN 174
+++ + H IT+ G +P P+ + + T P +L + ++++
Sbjct: 138 EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPI---------QAQS 188
Query: 175 WTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRE 234
W P+ Q + +++ A+ S Y++P H+ ++ + + GP LVL+PTRE
Sbjct: 189 W--PIAMQGRDIVAI----AKTGSGKTLGYLIPGFLHLQRI-RNDSRMGPTILVLSPTRE 241
Query: 235 LAQQIQAVISIFSRTMRIRHACLYGGTSK 263
LA QIQ F R+ RI CLYGG K
Sbjct: 242 LATQIQEEAVKFGRSSRISCTCLYGGAPK 270
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 47/170 (27%), Positives = 75/170 (44%)
Query: 103 VNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
V L + EE+ +R E I++ G+ PKP+KT + I +L +
Sbjct: 324 VPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPI 383
Query: 162 XXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEG 221
IP + I + A+ S ++LP HIL + E
Sbjct: 384 QAQA-----------IPAIMSGRDLIGI----AKTGSGKTIAFLLPMFRHILDQRPVGEA 428
Query: 222 DGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
+GP+A+++ PTRELA QI FS+++ +R C+YGGT Q+ L+
Sbjct: 429 EGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELK 478
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 161 (61.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAK 52
MWSATWP+E+++LA++FL D Q+NVG+ L+AN NI Q V++C E EK K
Sbjct: 274 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 325
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 35/121 (28%), Positives = 50/121 (41%)
Query: 110 TKEEIDSFRKEHNITLIGQNI-PKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCG 168
T E+D R++ IT+ G ++ PKPV N P Y++ + C
Sbjct: 66 TPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ----CQ 121
Query: 169 DKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALV 228
PL + + + A+ S Y+LPA+ HI P LE GDGPI V
Sbjct: 122 G-------FPLALSGRDMVGI----AQTGSGKTLAYLLPAIVHINHQPYLERGDGPIVSV 170
Query: 229 L 229
L
Sbjct: 171 L 171
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 117 FRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDKESKNWT 176
FR++ NI++ G +P+P++ +E P + + +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPI-----------QRQA 331
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGD----GPIALVLAPT 232
IP+ Q + I V AE S ++LP L I +PK+E + GP A+++APT
Sbjct: 332 IPIGLQNRDVIGV----AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPT 387
Query: 233 RELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRI 272
RELAQQI+ + F + + I+ + GG S+ Q + LR+
Sbjct: 388 RELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRM 427
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 156 (60.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 47/164 (28%), Positives = 77/164 (46%)
Query: 102 SVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
S L+ T+ + FR++ NI+ G IP+P+++ +E+ + S +L +
Sbjct: 280 SDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPI 339
Query: 162 XXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEG 221
IPL Q + I + AE S ++LP L +I ++P + E
Sbjct: 340 QMAA-----------IPLGLQQRDVIGI----AETGSGKTAAFVLPMLAYISRLPPMSEE 384
Query: 222 ---DGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTS 262
+GP A+V+APTRELAQQI+ F+ + R + GG S
Sbjct: 385 NETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQS 428
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 117 FRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDKES---K 173
F+++ NI G ++P P+++ DE+ +P +L G KE +
Sbjct: 328 FKEDFNIATKGGSVPNPMRSWDESGLPKRLL--------------ELVDRVGYKEPTPIQ 373
Query: 174 NWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEE-----GDGPIALV 228
IP+ Q++ I V A S ++LP L +I ++P+++E DGP A+V
Sbjct: 374 RAAIPIAMQSRDLIGV----AVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIV 429
Query: 229 LAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
LAPTRELAQQI+ F+ + + GG S Q LR
Sbjct: 430 LAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLR 472
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 134 (52.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLA 230
++++W P+ Q + +++ A+ S Y++P H+ ++ + GP LVL+
Sbjct: 256 QAQSW--PIAMQNRDIVAI----AKTGSGKTLGYLIPGFMHLQRIHN-DSRMGPTILVLS 308
Query: 231 PTRELAQQIQAVISIFSRTMRIRHACLYGGTSK 263
PTRELA QIQ F ++ +I ACLYGG K
Sbjct: 309 PTRELATQIQVEALKFGKSSKISCACLYGGAPK 341
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 21/53 (39%), Positives = 38/53 (71%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSAN-LAANPNIKQFVEICHEYEKPAK 52
M++ATWP+E++K+A + L +P Q+N+G+ + L AN +I Q +E+ EK ++
Sbjct: 411 MYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSR 463
Score = 63 (27.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 9/33 (27%), Positives = 22/33 (66%)
Query: 115 DSFRKEHNITLIGQNIPKPVKTLDETNIPSYIL 147
+++ ++H IT+ G +P P+ + + T +P+ +L
Sbjct: 141 EAYCRKHEITVSGGQVPPPLMSFEATGLPNELL 173
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 153 (58.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVALSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 340 QQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 153 (58.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVALSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 340 QQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 153 (58.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVALSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 340 QQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 153 (58.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVALSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 340 QQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 153 (58.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVALSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 340 QQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 153 (58.9 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVALSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 340 QQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 151 (58.2 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 118 RKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXXXXCGDKESKNWTI 177
++++NI++ G ++P P++ +E +PS +L + I
Sbjct: 232 KEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAA-----------I 280
Query: 178 PLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGD---GPIALVLAPTRE 234
P+ Q K I + AE S +I+P + I K+P L E + GP A+VLAPTRE
Sbjct: 281 PVLLQRKDLIGI----AETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRE 336
Query: 235 LAQQIQAVISIFSRTMRIRHACLYGG 260
LAQQIQ + F+ + R + GG
Sbjct: 337 LAQQIQVEGNKFAEPLGFRCVSVVGG 362
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/95 (34%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 279 VPVAMSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 334
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI + F + +R +YGG S Q L+
Sbjct: 335 QQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 369
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVALSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 340 QQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 33/95 (34%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 284 VPVAMSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 339
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI + F + +R +YGG S Q L+
Sbjct: 340 QQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 374
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 33/95 (34%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE GDGPIA+++ PTREL
Sbjct: 286 VPVAMSGRDMIGI----AKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELC 341
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI + F + +R +YGG S Q L+
Sbjct: 342 QQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQ 376
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 146 (56.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 33/95 (34%), Positives = 49/95 (51%)
Query: 177 IPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELA 236
+P+ + I + A+ S +I P L HI+ +LE G+GPIA+++ PTREL
Sbjct: 288 VPIALSGRDAIGI----AKTGSGKTAAFIWPILVHIMDQKELEPGEGPIAVIVCPTRELC 343
Query: 237 QQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
QQI A F + +R +YGG S Q L+
Sbjct: 344 QQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQ 378
Score = 44 (20.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 78 AVSFSLPFRDDKTSVVTVPSY-----PDPSVNHLQGKTKEEIDSFRKEHNITLIGQNIPK 132
++SFS RDD +Y +P+ Q + +EE+D + I + I
Sbjct: 143 SISFSRGIRDDIEEEDDQEAYFRYMAENPTAGLTQEEEEEEVDYDSDGNPIAPTTKKIIM 202
Query: 133 PVKTLDETNI 142
P+ +D + I
Sbjct: 203 PLPPIDHSEI 212
Score = 37 (18.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 110 TKEEIDSFRKEHNITLIGQNIPKP 133
T E+ R++ N+ + G PKP
Sbjct: 232 TGAEVVELRRKLNLKVSGAAPPKP 255
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 146 (56.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S Y+ PA+ HI+ P L+ G+GP+A+++ PTRELA Q+ F + I
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNIN 368
Query: 254 HACLYGGTSKMYQ 266
C YGG SK Q
Sbjct: 369 PICAYGGGSKWEQ 381
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 53/201 (26%), Positives = 87/201 (43%)
Query: 89 KTSVVTVPSYPDPSVNHLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYILG 148
K + V+ P + P+++++ + EID F +H+I + + KP +L I L
Sbjct: 27 KNTEVSPPYFQSPALDNVP---QTEIDKFLSDHSIKITDASADKP--SLRPI-ISFSFLP 80
Query: 149 PMXXXXXXXXXXXXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPA 208
P +S W PL F + I + AE S + LP
Sbjct: 81 PSNKDLYAPLDGFASPTAI---QSATW--PLLFAGRDVIGI----AETGSGKTLAFGLPC 131
Query: 209 LYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVI 268
L +L + ++ P+A+V++PTRELA QI + F+ + I+ AC++GG K Q
Sbjct: 132 LKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQRE 191
Query: 269 LLRILTSATNTSLGIYLQQND 289
L+ T + QND
Sbjct: 192 ALKSAAVVVATPGRLKDLQND 212
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 47/168 (27%), Positives = 74/168 (44%)
Query: 106 LQGKTKEEIDSFRKEHNITLIGQN---IPKPVKTLDETNIPSYILGPMXXXXXXXXXXXX 162
L + ++E F KE I++ +N +PKP+ T++ S I +
Sbjct: 108 LPTEDQQETMDFIKEFEISIKKENNFYLPKPIDTIESVPFQSTIKNFLSKKFEKPTPV-- 165
Query: 163 XXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGD 222
+S W I L+ + + ++ S ++ILPA+ HIL P+
Sbjct: 166 --------QSLGWPIALS--GSDMLGI----SKTGSGKTLSFILPAIEHILAQPRQSYYP 211
Query: 223 GPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILL 270
GP LV+APTRELA QI + R + I A +YGG + Q + L
Sbjct: 212 GPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQL 259
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 145 (56.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 175 WTIPLNFQAKKFISVLQKK-----AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVL 229
+T P QA+ + L + A+ S +I P L H++ +L+ GDGPI L+L
Sbjct: 289 YTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLIL 348
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQ 266
APTREL+ QI F + + C YGG SK Q
Sbjct: 349 APTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQ 385
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 112 EEIDSFRKEHNITLIGQNIPKPV 134
E++ R+ + + G + PKPV
Sbjct: 246 EQVRELRRTLGVKVTGPSPPKPV 268
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 106 LQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXX 164
L + E+++ R++ NI + G ++P+P+ +P+ + +
Sbjct: 263 LSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAI-- 320
Query: 165 XXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGP 224
+S+ +P + I + A+ S +Y+LP L HI ++ GP
Sbjct: 321 ------QSQ--ALPTILSGRDVIGI----AKTGSGKTLSYVLPMLRHIQDQQFSKDNQGP 368
Query: 225 IALVLAPTRELAQQIQAVISIFS-RTMRIRHACLYGGTSKMYQV 267
I L+L+PTRELA QI+ I F+ R +R C YGG+S Q+
Sbjct: 369 IGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQI 412
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 106 LQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXXXXX 164
L + E+++ R++ NI + G ++P+P+ +P+ + +
Sbjct: 263 LSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAI-- 320
Query: 165 XXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDGP 224
+S+ +P + I + A+ S +Y+LP L HI ++ GP
Sbjct: 321 ------QSQ--ALPTILSGRDVIGI----AKTGSGKTLSYVLPMLRHIQDQQFSKDNQGP 368
Query: 225 IALVLAPTRELAQQIQAVISIFS-RTMRIRHACLYGGTSKMYQV 267
I L+L+PTRELA QI+ I F+ R +R C YGG+S Q+
Sbjct: 369 IGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQI 412
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/175 (26%), Positives = 70/175 (40%)
Query: 98 YPDPSVNHLQGKTKEEIDSFRKE-HNITLIGQNIPKPVKTLDETNIPSYILGPMXXXXXX 156
Y +PS L ++EE + R E I + G ++PKPV+ + + L +
Sbjct: 505 YTEPS--DLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFA 562
Query: 157 XXXXXXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMP 216
IP + I V A+ S +++P HI
Sbjct: 563 SLTSIQAQA-----------IPAIMSGRDVIGV----AKTGSGKTMAFLIPMFRHIKDQR 607
Query: 217 KLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
LE +GPI L++ PTRELA QI F + + +R C YGG Q+ L+
Sbjct: 608 PLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELK 662
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI L+ G+GPIA+++ PTRELA QI F + + IR
Sbjct: 462 AKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIR 521
Query: 254 HACLYGGTSKMYQVILLR 271
C YGG Q+ L+
Sbjct: 522 ACCAYGGAPIKDQIADLK 539
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHI-LKMPKLEEGD-----GP 224
+S+ W PL + I V Q S ++LPAL HI ++ + E+ D P
Sbjct: 111 QSQMW--PLLLSGQDCIGVSQ----TGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSP 164
Query: 225 IALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
LVL+PTRELAQQI+ + +S + CLYGG S+ QV
Sbjct: 165 FVLVLSPTRELAQQIEGEVKKYSYN-GYKSVCLYGGGSRPEQV 206
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 93 (37.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 201 VFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTM------RIRH 254
V I+ AL + MP + G+GPIALV+ P+RELA+Q V+ F ++ R+R
Sbjct: 152 VLPMIILALQEEIMMP-IAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRS 210
Query: 255 ACLYGGTSKMYQVILLR 271
GG Q+ +++
Sbjct: 211 LLCIGGVDMRSQLDVVK 227
Score = 79 (32.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 105 HLQGKTKEEIDSFRKEHNITLIGQNIPKPVKTLDETNIPSYIL 147
H++ + +++D RK+ +IT+ G++IP P+K + PS +L
Sbjct: 67 HVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLL 109
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 128 (50.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ S ++LP HI +++ +GPI L+L PTRELA QI F +T+ +R
Sbjct: 422 AKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLR 481
Query: 254 HACLYGG 260
C YGG
Sbjct: 482 AVCAYGG 488
Score = 47 (21.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 106 LQGKTKEEIDSFRKE-HNITLIGQNIPKPVK 135
L T+ E+ R E I + G+++PKPV+
Sbjct: 348 LSEMTEAEVAELRLELDGIKVSGKDVPKPVQ 378
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 128 (50.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 46/180 (25%), Positives = 78/180 (43%)
Query: 100 DPSVNHLQGKTKEEIDS-----FRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXX 154
D H K++EE+ FR+++ I + G +P P++ +E+N+ + +L +
Sbjct: 658 DVCEKHWSQKSREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAK 717
Query: 155 XXXXXXXXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILK 214
IP+ + + I + AE S ++LP L ++ +
Sbjct: 718 YEKPTPIQMQA-----------IPIALEMRDLIGI----AETGSGKTAAFVLPMLSYVKQ 762
Query: 215 MPKLE---EGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
+P L DGP ALV+AP+RELA QI + F+ R + GG + Q LR
Sbjct: 763 LPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELR 822
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 128 (50.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 46/180 (25%), Positives = 78/180 (43%)
Query: 100 DPSVNHLQGKTKEEIDS-----FRKEHNITLIGQNIPKPVKTLDETNIPSYILGPMXXXX 154
D H K++EE+ FR+++ I + G +P P++ +E+N+ + +L +
Sbjct: 658 DVCEKHWSQKSREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAK 717
Query: 155 XXXXXXXXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILK 214
IP+ + + I + AE S ++LP L ++ +
Sbjct: 718 YEKPTPIQMQA-----------IPIALEMRDLIGI----AETGSGKTAAFVLPMLSYVKQ 762
Query: 215 MPKLE---EGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
+P L DGP ALV+AP+RELA QI + F+ R + GG + Q LR
Sbjct: 763 LPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELR 822
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 21/53 (39%), Positives = 39/53 (73%)
Query: 1 MWSATWPREIQKLAKEFLSDPIQLNVGSAN-LAANPNIKQFVEICHEYEKPAK 52
M++ATWP+E+++LA F++ P+++ VG + L+AN I Q VE+ ++++K K
Sbjct: 333 MFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKK 385
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEGDG----PIA 226
+S W P + I + A+ S + +PA+ H+LK K G P
Sbjct: 141 QSHTW--PFLLDGRDLIGI----AKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTC 194
Query: 227 LVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLR 271
LVL+PTRELA QI V+ ++ C+YGG+SK Q+ +R
Sbjct: 195 LVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIR 239
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 22/47 (46%), Positives = 36/47 (76%)
Query: 1 MWSATWPREIQKLAKEFLS-DPIQLNVGSANLAANPNIKQFVEICHE 46
M+SATWP ++ KLA+EF+ +PI++ +GS +LAAN ++ Q +E+ E
Sbjct: 301 MFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDE 347
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 194 AEVQSRSVFTYILPALYHILKMPKLEEGDGPIALVLAPTRELAQQIQAVISIFSRTMRIR 253
A+ + ++LPAL L P G GP LVL PTRELAQQ+ + + MR+R
Sbjct: 45 AQTGTGKTAAFVLPALQR-LSSPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVR 103
Query: 254 HACLYGGTSKMYQVILL 270
+ GG Q+ LL
Sbjct: 104 SGAILGGMPYHAQLRLL 120
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 2 WSATWPREIQKLAKEFLSDPIQLNVGSANLAANPNIKQFVEICHEYEKPAKWWDS 56
+SATWP ++ LA FL DP+++ +GS LAA+ NI Q VEI + + D+
Sbjct: 351 FSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDN 405
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMP-KLEEGDGPIALVL 229
+S++W P+ Q I + A+ + +Y++P HI P ++ +GP LVL
Sbjct: 228 QSQSW--PIILQGIDLIGI----AQTGTGKTLSYLMPGFIHIHSQPVSRKQRNGPGMLVL 281
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
PTRELA Q++A S + ++ C+YGG ++ Q+
Sbjct: 282 TPTRELALQVEAECSKYLYK-GLKSVCIYGGGNRKGQI 318
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 123 (48.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLEEG-DGPIALVL 229
+S+ W P+ Q I V A+ + +Y++P HI P L+ +GP LVL
Sbjct: 268 QSQAW--PIILQGIDLIGV----AQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVL 321
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
PTRELA Q+ A S +S ++ C+YGG + Q+
Sbjct: 322 TPTRELALQVDAECSEYSYR-GLKSVCIYGGGDRDGQI 358
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 7/15 (46%), Positives = 14/15 (93%)
Query: 110 TKEEIDSFRKE-HNI 123
++E++D++RKE +NI
Sbjct: 208 SQEQVDNWRKENYNI 222
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 50/190 (26%), Positives = 85/190 (44%)
Query: 109 KTKEEIDSFRKEHNITLIG-------QNIPKPVKTLDETNIPSYILGPMXXXXXXXXXXX 161
++ EE+ +RKE+N + + IP PV T +E ++ G M
Sbjct: 244 RSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEAF--AHYPGIMENIVRVGFKKP 301
Query: 162 XXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHI--LKMPKLE 219
+S+ W + LN I + A+ + Y+LP H+ MP+ +
Sbjct: 302 TPI------QSQAWPVVLN--GIDLIGI----AQTGTGKTLAYLLPGFIHMDGQPMPR-D 348
Query: 220 EGDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQVILLRILTSATNT 279
+ +GP LVL PTRELA QI+A + +S + C+YGG + Q+ +++TS +
Sbjct: 349 KRNGPGMLVLTPTRELALQIEAECNKYSYK-GFKSICIYGGGDRNAQI---KVVTSGVDI 404
Query: 280 SLGIYLQQND 289
+ + ND
Sbjct: 405 VIATPGRLND 414
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMP-KLEEGDGPIALVL 229
+S+ W P+ Q I V A+ + +Y++P H+ P E+ +GP LVL
Sbjct: 249 QSQAW--PIILQGIDLIVV----AQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVL 302
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
PTRELA ++A S +S ++ C+YGG ++ Q+
Sbjct: 303 TPTRELALHVEAECSKYSYK-GLKSICIYGGRNRNGQI 339
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 44/175 (25%), Positives = 75/175 (42%)
Query: 96 PSYPDPSVNHLQGKTKEEIDS-----FRKEHNITLIGQNIPKPVKTLDETNIPSYILGPM 150
P + H K EE+ F++++NIT G+NIP P++ +E +I ++ +
Sbjct: 124 PLFSGQESTHWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSII 183
Query: 151 XXXXXXXXXXXXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALY 210
+IPL + + + V AE S +++P L
Sbjct: 184 SQLGYEEPTSVQRA-----------SIPLALKKRDVVGV----AETGSGKTLAFLIPVLN 228
Query: 211 HILKMP----KLEE-GDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGG 260
+IL + K E+ + P+ L+LAPTRELA QI F + + + + GG
Sbjct: 229 YILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPIIGG 283
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 44/175 (25%), Positives = 75/175 (42%)
Query: 96 PSYPDPSVNHLQGKTKEEIDS-----FRKEHNITLIGQNIPKPVKTLDETNIPSYILGPM 150
P + H K EE+ F++++NIT G+NIP P++ +E +I ++ +
Sbjct: 124 PLFSGQESTHWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSII 183
Query: 151 XXXXXXXXXXXXXXXXCGDKESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALY 210
+IPL + + + V AE S +++P L
Sbjct: 184 SQLGYEEPTSVQRA-----------SIPLALKKRDVVGV----AETGSGKTLAFLIPVLN 228
Query: 211 HILKMP----KLEE-GDGPIALVLAPTRELAQQIQAVISIFSRTMRIRHACLYGG 260
+IL + K E+ + P+ L+LAPTRELA QI F + + + + GG
Sbjct: 229 YILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPIIGG 283
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 112 (44.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 171 ESKNWTIPLNFQAKKFISVLQKKAEVQSRSVFTYILPALYHILKMPKLE-EGDGPIALVL 229
+S+ W P+ Q I V A+ + Y++P H++ P L+ + + P LVL
Sbjct: 269 QSQAW--PIVLQGIDLIGV----AQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVL 322
Query: 230 APTRELAQQIQAVISIFSRTMRIRHACLYGGTSKMYQV 267
PTRELA Q++ +S +R C+YGG ++ Q+
Sbjct: 323 TPTRELALQVEGECCKYSYK-GLRSVCVYGGGNRDEQI 359
Score = 46 (21.3 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 110 TKEEIDSFRKEH-NITLI----GQN--IPKPVKTLDE 139
+K E DS+RKE+ NIT G+ IP P T D+
Sbjct: 209 SKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDD 245
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 317 301 0.00096 115 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 111
No. of states in DFA: 616 (65 KB)
Total size of DFA: 225 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 23.35u 0.07s 23.42t Elapsed: 00:00:07
Total cpu time: 23.37u 0.07s 23.44t Elapsed: 00:00:08
Start: Thu Aug 15 11:44:46 2013 End: Thu Aug 15 11:44:54 2013
WARNINGS ISSUED: 1