Query psy10678
Match_columns 136
No_of_seqs 142 out of 329
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 15:52:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ece_A 462AA long hypothetical 100.0 2.3E-31 8E-36 232.9 10.7 98 12-112 9-126 (462)
2 2ece_A 462AA long hypothetical 98.8 1.7E-08 5.7E-13 88.6 8.7 48 71-118 321-368 (462)
3 3c75_H MADH, methylamine dehyd 94.6 0.063 2.2E-06 45.6 6.4 83 26-117 126-221 (426)
4 3c75_H MADH, methylamine dehyd 94.5 0.072 2.4E-06 45.3 6.5 80 27-115 328-413 (426)
5 2mad_H Methylamine dehydrogena 93.9 0.26 8.9E-06 39.9 8.3 82 26-116 275-362 (373)
6 3sjl_D Methylamine dehydrogena 93.2 0.25 8.5E-06 41.7 7.3 82 27-117 289-375 (386)
7 2mad_H Methylamine dehydrogena 93.0 0.37 1.3E-05 39.0 7.8 92 13-117 64-169 (373)
8 2oiz_A Aromatic amine dehydrog 92.4 0.81 2.8E-05 36.2 9.0 79 27-115 263-347 (361)
9 3sjl_D Methylamine dehydrogena 92.2 0.28 9.5E-06 41.4 6.3 82 26-117 86-181 (386)
10 1jof_A Carboxy-CIS,CIS-muconat 92.1 1.2 4.1E-05 34.5 9.3 85 26-115 263-353 (365)
11 1qks_A Cytochrome CD1 nitrite 92.0 0.14 4.7E-06 44.6 4.3 82 26-112 448-545 (567)
12 2oiz_A Aromatic amine dehydrog 92.0 0.32 1.1E-05 38.5 6.1 84 26-117 58-153 (361)
13 1nir_A Nitrite reductase; hemo 91.9 0.15 5.1E-06 43.3 4.3 74 26-100 429-512 (543)
14 1ri6_A Putative isomerase YBHE 90.8 2.5 8.6E-05 30.8 9.6 69 45-115 253-322 (343)
15 1ri6_A Putative isomerase YBHE 89.8 3.5 0.00012 30.0 9.6 42 76-117 236-278 (343)
16 1mda_H Methylamine dehydrogena 89.6 0.35 1.2E-05 40.0 4.4 80 26-117 73-167 (368)
17 3hfq_A Uncharacterized protein 89.1 1.6 5.5E-05 32.8 7.5 41 76-116 245-285 (347)
18 1mda_H Methylamine dehydrogena 88.3 1.4 4.7E-05 36.4 7.1 59 46-115 47-115 (368)
19 3u4y_A Uncharacterized protein 88.2 6.1 0.00021 29.0 10.1 38 78-115 183-220 (331)
20 3scy_A Hypothetical bacterial 85.6 4.2 0.00015 30.7 8.1 40 75-114 263-304 (361)
21 1jmx_B Amine dehydrogenase; ox 85.3 6.1 0.00021 28.9 8.6 38 76-117 300-337 (349)
22 1pby_B Quinohemoprotein amine 84.0 5.6 0.00019 28.8 7.8 37 76-116 285-321 (337)
23 3vgz_A Uncharacterized protein 84.0 8.9 0.00031 28.1 9.0 37 78-117 279-315 (353)
24 1nir_A Nitrite reductase; hemo 82.5 3.3 0.00011 35.0 6.9 78 26-116 187-268 (543)
25 3scy_A Hypothetical bacterial 79.3 13 0.00046 27.9 8.7 69 26-100 267-335 (361)
26 2iwa_A Glutamine cyclotransfer 78.9 7.2 0.00025 31.0 7.4 62 45-115 44-105 (266)
27 1qks_A Cytochrome CD1 nitrite 78.1 2.6 9E-05 36.5 4.9 35 77-114 348-382 (567)
28 3mbr_X Glutamine cyclotransfer 76.1 5.8 0.0002 31.5 6.1 62 46-116 44-105 (243)
29 3nol_A Glutamine cyclotransfer 75.8 4.2 0.00015 32.8 5.3 35 79-116 93-127 (262)
30 3nok_A Glutaminyl cyclase; bet 75.7 5.5 0.00019 32.3 5.9 42 71-116 95-136 (268)
31 3u4y_A Uncharacterized protein 73.9 2.5 8.5E-05 31.2 3.2 26 78-103 280-305 (331)
32 1jof_A Carboxy-CIS,CIS-muconat 73.1 19 0.00065 27.6 8.2 27 75-101 149-175 (365)
33 3vgz_A Uncharacterized protein 71.6 15 0.0005 26.9 6.9 36 77-115 95-130 (353)
34 3jrp_A Fusion protein of prote 70.2 15 0.00053 26.8 6.8 38 78-116 264-301 (379)
35 2iwa_A Glutamine cyclotransfer 69.5 4 0.00014 32.5 3.7 33 82-117 161-193 (266)
36 3hfq_A Uncharacterized protein 68.4 6.1 0.00021 29.5 4.3 37 78-114 93-129 (347)
37 1npe_A Nidogen, entactin; glyc 67.0 4.2 0.00014 29.8 3.1 34 80-116 216-249 (267)
38 1jmx_B Amine dehydrogenase; ox 65.7 25 0.00085 25.5 7.1 62 45-115 21-84 (349)
39 3qqz_A Putative uncharacterize 62.9 9.6 0.00033 30.0 4.6 59 43-116 10-68 (255)
40 3ks7_A Putative putative pngas 62.4 1.9 6.4E-05 37.6 0.4 40 80-120 154-193 (397)
41 3nol_A Glutamine cyclotransfer 61.8 9.2 0.00032 30.8 4.4 36 82-120 181-216 (262)
42 3amr_A 3-phytase; beta-propell 61.4 21 0.00073 30.0 6.7 34 82-117 243-276 (355)
43 3f3f_A Nucleoporin SEH1; struc 59.9 29 0.001 24.5 6.4 33 75-108 311-343 (351)
44 3dsm_A Uncharacterized protein 59.1 7.4 0.00025 29.9 3.3 35 78-116 274-312 (328)
45 3dsm_A Uncharacterized protein 56.6 13 0.00044 28.5 4.3 32 81-115 139-171 (328)
46 3mbr_X Glutamine cyclotransfer 55.8 13 0.00044 29.4 4.3 38 81-121 158-195 (243)
47 3sre_A PON1, serum paraoxonase 55.0 12 0.00041 30.9 4.1 24 78-101 228-251 (355)
48 1pby_B Quinohemoprotein amine 55.0 18 0.0006 26.1 4.6 37 76-115 39-75 (337)
49 3bws_A Protein LP49; two-domai 54.4 40 0.0014 25.6 6.7 28 74-101 404-431 (433)
50 3i2n_A WD repeat-containing pr 54.3 6.9 0.00024 28.6 2.3 29 75-103 326-354 (357)
51 3nok_A Glutaminyl cyclase; bet 53.7 11 0.00037 30.6 3.6 35 82-119 190-224 (268)
52 2vdu_B TRNA (guanine-N(7)-)-me 52.5 19 0.00064 28.3 4.7 41 76-116 313-355 (450)
53 3bws_A Protein LP49; two-domai 51.7 76 0.0026 24.0 8.6 24 78-101 310-333 (433)
54 1l0q_A Surface layer protein; 51.6 72 0.0025 23.8 9.3 27 75-101 162-188 (391)
55 1l0q_A Surface layer protein; 50.5 23 0.0008 26.5 4.8 35 78-115 251-285 (391)
56 2p4o_A Hypothetical protein; p 47.5 8.7 0.0003 29.1 1.9 23 79-101 175-197 (306)
57 1fwx_A Nitrous oxide reductase 46.8 12 0.00042 33.5 3.1 24 78-101 284-307 (595)
58 1fwx_A Nitrous oxide reductase 45.8 32 0.0011 30.9 5.6 70 42-117 109-196 (595)
59 3sbq_A Nitrous-oxide reductase 43.8 15 0.00051 33.7 3.2 83 30-115 271-377 (638)
60 3amr_A 3-phytase; beta-propell 43.7 48 0.0016 27.8 6.1 73 44-117 98-181 (355)
61 2xyi_A Probable histone-bindin 43.1 33 0.0011 26.9 4.7 29 78-106 285-313 (430)
62 2pm9_A Protein WEB1, protein t 42.1 58 0.002 24.3 5.8 28 78-105 313-340 (416)
63 4hn1_A Putative 3-epimerase in 37.7 45 0.0015 26.0 4.7 55 46-110 80-142 (201)
64 1npe_A Nidogen, entactin; glyc 37.3 20 0.00067 26.2 2.5 24 78-101 174-197 (267)
65 2fp8_A Strictosidine synthase; 33.2 25 0.00087 26.4 2.5 25 78-102 192-216 (322)
66 3ei3_B DNA damage-binding prot 32.2 29 0.00099 26.1 2.7 23 78-102 360-382 (383)
67 2ojh_A Uncharacterized protein 29.9 56 0.0019 22.5 3.7 27 78-106 49-75 (297)
68 1gxr_A ESG1, transducin-like e 29.8 65 0.0022 23.0 4.1 24 78-103 59-82 (337)
69 3g4e_A Regucalcin; six bladed 29.2 24 0.00081 26.3 1.8 23 78-100 156-178 (297)
70 2aq5_A Coronin-1A; WD40 repeat 28.7 40 0.0014 25.7 3.0 26 78-103 275-300 (402)
71 4a11_B DNA excision repair pro 28.5 1.7E+02 0.0059 21.3 6.4 25 78-102 194-218 (408)
72 1pjx_A Dfpase, DIISOPROPYLFLUO 28.5 52 0.0018 23.7 3.5 24 78-101 275-298 (314)
73 4ggc_A P55CDC, cell division c 28.1 48 0.0017 23.6 3.2 23 78-101 292-314 (318)
74 3ryk_A DTDP-4-dehydrorhamnose 27.8 1E+02 0.0036 23.9 5.3 53 46-108 106-166 (205)
75 2xyi_A Probable histone-bindin 27.6 55 0.0019 25.6 3.7 27 76-102 327-353 (430)
76 2qe8_A Uncharacterized protein 27.0 33 0.0011 26.2 2.3 25 76-100 200-224 (343)
77 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 26.9 52 0.0018 25.0 3.3 19 46-64 83-101 (185)
78 1dzr_A DTDP-4-dehydrorhamnose 26.4 53 0.0018 24.9 3.3 19 46-64 83-101 (183)
79 3kya_A Putative phosphatase; s 25.3 33 0.0011 29.8 2.2 24 78-101 254-277 (496)
80 3vl1_A 26S proteasome regulato 24.7 47 0.0016 25.0 2.7 29 78-106 298-326 (420)
81 3fvz_A Peptidyl-glycine alpha- 24.6 42 0.0014 25.3 2.5 24 78-101 203-226 (329)
82 2aq5_A Coronin-1A; WD40 repeat 23.5 99 0.0034 23.5 4.4 25 78-102 139-163 (402)
83 4g56_B MGC81050 protein; prote 23.1 1E+02 0.0036 23.5 4.5 23 78-100 319-341 (357)
84 2ixk_A DTDP-4-dehydrorhamnose 22.7 61 0.0021 24.6 3.0 19 46-64 84-102 (184)
85 2ghs_A AGR_C_1268P; regucalcin 22.5 55 0.0019 24.9 2.7 24 78-101 186-209 (326)
86 3jro_A Fusion protein of prote 22.2 1.8E+02 0.006 25.1 6.1 38 78-116 262-299 (753)
87 1oi6_A PCZA361.16; epimerase, 21.8 1.4E+02 0.0049 23.0 5.0 53 46-108 83-143 (205)
88 2dg1_A DRP35, lactonase; beta 21.6 41 0.0014 24.7 1.8 24 78-101 189-212 (333)
89 1k8k_C P40, ARP2/3 complex 41 20.8 1.9E+02 0.0064 21.0 5.3 24 78-102 210-233 (372)
90 3dr2_A Exported gluconolactona 20.6 60 0.0021 24.1 2.6 24 78-101 195-223 (305)
91 1rwi_B Serine/threonine-protei 20.5 39 0.0013 23.9 1.4 23 78-101 241-263 (270)
92 4gqb_B Methylosome protein 50; 20.4 1.5E+02 0.005 22.8 4.8 24 78-101 307-330 (344)
93 4g56_B MGC81050 protein; prote 20.2 1.3E+02 0.0045 22.9 4.5 24 78-101 277-300 (357)
94 3tc9_A Hypothetical hydrolase; 20.1 61 0.0021 26.4 2.7 25 76-100 275-299 (430)
95 1wlt_A 176AA long hypothetical 20.1 1.3E+02 0.0045 23.1 4.5 57 47-113 102-166 (196)
96 2vdu_B TRNA (guanine-N(7)-)-me 20.1 1.1E+02 0.0037 23.9 4.0 27 75-101 107-133 (450)
No 1
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.97 E-value=2.3e-31 Score=232.92 Aligned_cols=98 Identities=27% Similarity=0.435 Sum_probs=89.4
Q ss_pred CCCCCCCHHHHHhcCCCCceeEEEEecC--CCCCCCeEEEEeeCCCCCccccccc---------------ccccCCCccc
Q psy10678 12 KGPGYRTPVDAMRYGPRETLLYVICIQP--NGQHPDYLAVIDVDPQSKTYQQVRN---------------TLRAGLAMVT 74 (136)
Q Consensus 12 ~~~~y~sp~~Am~~ap~Ek~dYvatldv--d~~spdyl~VIdv~p~s~~y~ev~~---------------~~~a~~~~~g 74 (136)
.|||||||++||+ +|+|+++||+|+++ +.++||||+|||++|.|+||+||+| || +|++|+|
T Consensus 9 ~~~~y~sp~~a~~-~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn-~css~~~ 86 (462)
T 2ece_A 9 DPTFYPSPKMAMK-APPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWN-ACSSALC 86 (462)
T ss_dssp CTTCCSSHHHHHT-SCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEES-CCGGGGS
T ss_pred CCCccCChHHHhc-CCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchh-hhhhhcc
Confidence 4999999999999 99999999999998 6789999999999999999999954 66 8999998
Q ss_pred cccCC--CCCCeEEEccCCCCcEEEEeC-CCCCCCeEeEEE
Q psy10678 75 DILIS--LDDRYLYTSNWMHGDIRQYDI-RDTAHPVLVGQI 112 (136)
Q Consensus 75 D~l~s--~drr~L~vp~l~sgrIyv~Dv-sDP~~PkL~~~v 112 (136)
+. .+ ++|||||+||++|++||+||+ +||++|+|+++|
T Consensus 87 ~~-~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~i 126 (462)
T 2ece_A 87 PN-GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVI 126 (462)
T ss_dssp TT-CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEE
T ss_pred cc-cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeee
Confidence 84 57 999999999999999999999 899999994444
No 2
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.78 E-value=1.7e-08 Score=88.63 Aligned_cols=48 Identities=54% Similarity=0.937 Sum_probs=45.4
Q ss_pred CccccccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeeccee
Q psy10678 71 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKI 118 (136)
Q Consensus 71 ~~~gD~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~~ 118 (136)
+...|+.+|+|.||||++||.++.|.||||+|+.+|+++++|++||.+
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~ 368 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIF 368 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTT
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCee
Confidence 456889999999999999999999999999999999999999999986
No 3
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.63 E-value=0.063 Score=45.61 Aligned_cols=83 Identities=10% Similarity=0.038 Sum_probs=56.2
Q ss_pred CCCCceeEEEEecCC----CCCCCeEEEEeeCCCCCcccccccccccCC--------CccccccCCCCCCeEEEccCC-C
Q psy10678 26 GPRETLLYVICIQPN----GQHPDYLAVIDVDPQSKTYQQVRNTLRAGL--------AMVTDILISLDDRYLYTSNWM-H 92 (136)
Q Consensus 26 ap~Ek~dYvatldvd----~~spdyl~VIdv~p~s~~y~ev~~~~~a~~--------~~~gD~l~s~drr~L~vp~l~-s 92 (136)
.|..+..||+.-... .+.-+.+.|||.... ++++++. .. .....+.+++|.|+||+.++. +
T Consensus 126 SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-----~vv~~I~-v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~ 199 (426)
T 3c75_H 126 AEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-----LPIADIE-LPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPA 199 (426)
T ss_dssp CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-----CEEEEEE-ETTCCCCCBSCCGGGSEECTTSSEEEEEECSSS
T ss_pred CCCCCEEEEEeccccccccCCCCCEEEEEECCCC-----cEEEEEE-CCCccccccCCCcceEEEcCCCCEEEEEecCCC
Confidence 578888898875322 123467888876553 4555442 11 112344478899999999986 8
Q ss_pred CcEEEEeCCCCCCCeEeEEEeecce
Q psy10678 93 GDIRQYDIRDTAHPVLVGQIFLGGK 117 (136)
Q Consensus 93 grIyv~DvsDP~~PkL~~~v~~gg~ 117 (136)
+.|.++|+.. =+++++|.+||.
T Consensus 200 ~~VsVID~~t---~kvv~~I~v~g~ 221 (426)
T 3c75_H 200 PAVGVVDLEG---KTFDRMLDVPDC 221 (426)
T ss_dssp CEEEEEETTT---TEEEEEEECCSE
T ss_pred CeEEEEECCC---CeEEEEEEcCCc
Confidence 8999999832 278899999874
No 4
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.54 E-value=0.072 Score=45.28 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=53.4
Q ss_pred CCCceeEEEEecCCCC----CCCeEEEEeeCCCCCcccccccccccCCCccccccCCCCCC-eEEEccCCCCcEEEEeCC
Q psy10678 27 PRETLLYVICIQPNGQ----HPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDR-YLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 27 p~Ek~dYvatldvd~~----spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr-~L~vp~l~sgrIyv~Dvs 101 (136)
+..+..||+.-+-+.. ..+-++|||..-. +++.++. .....-.+.++.|++ +||+.+|.++.|.|||+.
T Consensus 328 ~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~-----kvv~~I~-vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 328 RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG-----ERINKIE-LGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC-----CEEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred CCCCEEEEEecccccccccCCCCEEEEEECCCC-----eEEEEEE-CCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 4456678887543222 1357999997664 6766653 111123344788888 999999999999999983
Q ss_pred CCCCCeEeEEE-eec
Q psy10678 102 DTAHPVLVGQI-FLG 115 (136)
Q Consensus 102 DP~~PkL~~~v-~~g 115 (136)
. -+++++| .+|
T Consensus 402 t---~kvv~tI~~vG 413 (426)
T 3c75_H 402 T---GEELRSVDQLG 413 (426)
T ss_dssp T---CCEEEEECCCS
T ss_pred C---CCEEEEecCCC
Confidence 3 2677887 455
No 5
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=93.88 E-value=0.26 Score=39.90 Aligned_cols=82 Identities=13% Similarity=0.052 Sum_probs=50.8
Q ss_pred CCCCceeEEEEecCCC----CCCCeEEEEeeCCCCCcccccccccccCCCccccccCCCCCC-eEEEccCCCCcEEEEeC
Q psy10678 26 GPRETLLYVICIQPNG----QHPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDR-YLYTSNWMHGDIRQYDI 100 (136)
Q Consensus 26 ap~Ek~dYvatldvd~----~spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr-~L~vp~l~sgrIyv~Dv 100 (136)
.+..+..||+.-+-+. ...+-+.|||..-. +++..+. .....-.+.++.|.+ .||+.++.++.|.+||+
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-----~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-----QTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-----EEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 3455667777653221 12356889987553 6666552 111122333678877 89999999999999998
Q ss_pred CCCCCCeEeEE-Eeecc
Q psy10678 101 RDTAHPVLVGQ-IFLGG 116 (136)
Q Consensus 101 sDP~~PkL~~~-v~~gg 116 (136)
.. =+++++ +.+|.
T Consensus 349 ~t---~~vv~~i~~vG~ 362 (373)
T 2mad_H 349 GA---GDQDQSTVELGS 362 (373)
T ss_pred CC---CCEEeeecCCCC
Confidence 32 256677 44553
No 6
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=93.16 E-value=0.25 Score=41.70 Aligned_cols=82 Identities=13% Similarity=0.149 Sum_probs=55.0
Q ss_pred CCCceeEEEEecCC--C--CCCCeEEEEeeCCCCCcccccccccccCCCccccccCCCCCC-eEEEccCCCCcEEEEeCC
Q psy10678 27 PRETLLYVICIQPN--G--QHPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDR-YLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 27 p~Ek~dYvatldvd--~--~spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr-~L~vp~l~sgrIyv~Dvs 101 (136)
+..+..||++-+-+ . +...-+.|||..-. +++..+.. -.-.-.+.++.|.+ +||+.++.++.|.+||+.
T Consensus 289 ~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~-----kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 289 RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG-----ERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC-----CEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEeccccccccCCCCCEEEEEECCCC-----eEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 45677999987432 1 12367889998764 67665521 11111233677765 899999999999999993
Q ss_pred CCCCCeEeEEEeecce
Q psy10678 102 DTAHPVLVGQIFLGGK 117 (136)
Q Consensus 102 DP~~PkL~~~v~~gg~ 117 (136)
. =|++++|..+|.
T Consensus 363 t---~k~~~~i~~~~~ 375 (386)
T 3sjl_D 363 S---GEELRSVNQLGH 375 (386)
T ss_dssp T---CCEEEEECCCCS
T ss_pred C---CcEEEEecCCCC
Confidence 2 268888888764
No 7
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=92.97 E-value=0.37 Score=39.00 Aligned_cols=92 Identities=10% Similarity=-0.014 Sum_probs=58.9
Q ss_pred CCCCCCHHHHHhcCCCCceeEEEEecC----CCCCCCeEEEEeeCCCCCcccccccccccCC--------CccccccCCC
Q psy10678 13 GPGYRTPVDAMRYGPRETLLYVICIQP----NGQHPDYLAVIDVDPQSKTYQQVRNTLRAGL--------AMVTDILISL 80 (136)
Q Consensus 13 ~~~y~sp~~Am~~ap~Ek~dYvatldv----d~~spdyl~VIdv~p~s~~y~ev~~~~~a~~--------~~~gD~l~s~ 80 (136)
++++. |..|+ +|-.+..|++.-.. ..+.-+.+.+||..-. +++++.. .. ....++.+|+
T Consensus 64 ~~g~~-p~i~~--spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~-----~~~~~i~-~~~~~~~~~g~~p~~~~~sp 134 (373)
T 2mad_H 64 NGGFL-PNPVA--AHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF-----LPIADIE-LPDAPRFDVGPYSWMNANTP 134 (373)
T ss_pred cCCCC-CCeEE--CCCCCEEEEEeccccccccCCCCCeEEEEECCCC-----cEEEEEE-CCCccccccCCCccceEECC
Confidence 44554 33333 58888999986432 1234577888888532 4444442 11 1123445789
Q ss_pred CCCeEEEccCC-CCcEEEEeCCCCCCCeEeEE-Eeecce
Q psy10678 81 DDRYLYTSNWM-HGDIRQYDIRDTAHPVLVGQ-IFLGGK 117 (136)
Q Consensus 81 drr~L~vp~l~-sgrIyv~DvsDP~~PkL~~~-v~~gg~ 117 (136)
|.|+||+.+.. ++.|.+|| .. . +++++ |.++|.
T Consensus 135 DG~~l~v~n~~~~~~v~viD-~t-~--~~~~~~i~~~~~ 169 (373)
T 2mad_H 135 NNADLLFFQFAAGPAVGLVV-QG-G--SSDDQLLSSPTC 169 (373)
T ss_pred CCCEEEEEecCCCCeEEEEE-CC-C--CEEeEEcCCCce
Confidence 99999999986 68899999 43 3 66788 888764
No 8
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=92.44 E-value=0.81 Score=36.15 Aligned_cols=79 Identities=19% Similarity=0.251 Sum_probs=50.4
Q ss_pred CCCceeEEEEe-cCC----CCCCCeEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 27 PRETLLYVICI-QPN----GQHPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 27 p~Ek~dYvatl-dvd----~~spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
|..+..||+.- +-. .+...-+.|||..- .+++..+. .-. .-.+.++++.++||+.++ +.|++||..
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-----~~~v~~i~-~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~ 333 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-----KQRVARIP-GRD-ALSMTIDQQRNLMLTLDG--GNVNVYDIS 333 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-----TEEEEEEE-CTT-CCEEEEETTTTEEEEECS--SCEEEEECS
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCC-----CcEEEEEe-cCC-eeEEEECCCCCEEEEeCC--CeEEEEECC
Confidence 34456676543 211 11234688888654 36766653 222 444457889999999997 999999984
Q ss_pred CCCCCeEeEEE-eec
Q psy10678 102 DTAHPVLVGQI-FLG 115 (136)
Q Consensus 102 DP~~PkL~~~v-~~g 115 (136)
. .+++++++| -+|
T Consensus 334 t-~~l~~~~~i~~~G 347 (361)
T 2oiz_A 334 Q-PEPKLLRTIEGAA 347 (361)
T ss_dssp S-SSCEEEEEETTSC
T ss_pred C-CcceeeEEeccCC
Confidence 3 556888887 344
No 9
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=92.18 E-value=0.28 Score=41.39 Aligned_cols=82 Identities=10% Similarity=0.044 Sum_probs=53.8
Q ss_pred CCCCceeEEEEecC----CCCCCCeEEEEeeCCCCCcccccccccccCCC--------ccccccCCCCCCeEEEccCC-C
Q psy10678 26 GPRETLLYVICIQP----NGQHPDYLAVIDVDPQSKTYQQVRNTLRAGLA--------MVTDILISLDDRYLYTSNWM-H 92 (136)
Q Consensus 26 ap~Ek~dYvatldv----d~~spdyl~VIdv~p~s~~y~ev~~~~~a~~~--------~~gD~l~s~drr~L~vp~l~-s 92 (136)
.|-.+..||+.-.- .++..+.+.|||..-. +++..+. ... ....+.+++|.|+||+.|.. +
T Consensus 86 spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~-----~v~~~I~-v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 86 ADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL-----LPTADIE-LPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-----CEEEEEE-ETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred CCCCCEEEEEcccccccccCCCCCEEEEEECCCC-----eEEEEEE-CCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 58888899985321 1123466777776543 4544432 110 11223478899999999975 8
Q ss_pred CcEEEEeC-CCCCCCeEeEEEeecce
Q psy10678 93 GDIRQYDI-RDTAHPVLVGQIFLGGK 117 (136)
Q Consensus 93 grIyv~Dv-sDP~~PkL~~~v~~gg~ 117 (136)
+.|.++|+ +. +++++|.++|.
T Consensus 160 ~~VsVID~~t~----~vv~tI~v~g~ 181 (386)
T 3sjl_D 160 PAVGVVDLEGK----AFKRMLDVPDC 181 (386)
T ss_dssp CEEEEEETTTT----EEEEEEECCSE
T ss_pred CeEEEEECCCC----cEEEEEECCCc
Confidence 99999999 33 78999988764
No 10
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=92.05 E-value=1.2 Score=34.47 Aligned_cols=85 Identities=8% Similarity=0.045 Sum_probs=49.0
Q ss_pred CCCCceeEEEEecCCCCCCCeEEEEeeCCCCCccccccc---ccccCCCccccccCCC---CCCeEEEccCCCCcEEEEe
Q psy10678 26 GPRETLLYVICIQPNGQHPDYLAVIDVDPQSKTYQQVRN---TLRAGLAMVTDILISL---DDRYLYTSNWMHGDIRQYD 99 (136)
Q Consensus 26 ap~Ek~dYvatldvd~~spdyl~VIdv~p~s~~y~ev~~---~~~a~~~~~gD~l~s~---drr~L~vp~l~sgrIyv~D 99 (136)
.|..+..|++.-+-+.+.+..++|++++.. +++.. ...........+-+++ +.++|++.+..++.|.+||
T Consensus 263 spdG~~l~v~~~~~~~~~~~~i~v~~~~~~----g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 263 TFSGKYMFASSRANKFELQGYIAGFKLRDC----GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp CTTSSEEEEEEEESSTTSCCEEEEEEECTT----SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred CCCCCEEEEECCCCCCCCCCeEEEEEECCC----CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 566777776665555455668889988742 23321 1100000111222456 7899999999999999999
Q ss_pred CCCCCCCeEeEEEeec
Q psy10678 100 IRDTAHPVLVGQIFLG 115 (136)
Q Consensus 100 vsDP~~PkL~~~v~~g 115 (136)
+. +..-+.++++.++
T Consensus 339 ~~-~~~l~~~~~~~~~ 353 (365)
T 1jof_A 339 WK-DEFLHRVARVRIP 353 (365)
T ss_dssp EE-TTEEEEEEEEECC
T ss_pred Ec-hhhCceeeEEEcC
Confidence 82 2233333444443
No 11
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.98 E-value=0.14 Score=44.56 Aligned_cols=82 Identities=18% Similarity=0.289 Sum_probs=50.2
Q ss_pred CCCCceeEEEE-ecCCCCCCCeEEEEeeCCC-----CCccccc-cc-cccc--C--CCccccccCCCCCCeEEEccC---
Q psy10678 26 GPRETLLYVIC-IQPNGQHPDYLAVIDVDPQ-----SKTYQQV-RN-TLRA--G--LAMVTDILISLDDRYLYTSNW--- 90 (136)
Q Consensus 26 ap~Ek~dYvat-ldvd~~spdyl~VIdv~p~-----s~~y~ev-~~-~~~a--~--~~~~gD~l~s~drr~L~vp~l--- 90 (136)
.|..+.+||.+ +.+|.+-.+-.+|||.... ...|..| +. |..- . -+.+.. ++++.++||+++|
T Consensus 448 ~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~G~~~~~s~~~~~ 525 (567)
T 1qks_A 448 HPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE--FNKDGTEVWFSVWNGK 525 (567)
T ss_dssp CTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE--ECTTSSEEEEEEECCT
T ss_pred CCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee--ECCCCCEEEEEeecCC
Confidence 56667777655 4444333458999999876 4433333 23 3310 0 011222 6889999999999
Q ss_pred -CCCcEEEEeCCCCCCCeEeEEE
Q psy10678 91 -MHGDIRQYDIRDTAHPVLVGQI 112 (136)
Q Consensus 91 -~sgrIyv~DvsDP~~PkL~~~v 112 (136)
.++.|.|||... =+|.++|
T Consensus 526 ~~~~~i~v~D~~t---~~~~~~i 545 (567)
T 1qks_A 526 DQESALVVVDDKT---LELKHVI 545 (567)
T ss_dssp TSCCEEEEEETTT---TEEEEEE
T ss_pred CCCCcEEEEECCC---ceEEEEe
Confidence 489999999832 2674444
No 12
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=91.96 E-value=0.32 Score=38.49 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=53.1
Q ss_pred CCCCceeEEEEecCC----CCCCCeEEEEeeCCCCCcccccccccccC------CCccccccCCCCCCeEEEccCC-CCc
Q psy10678 26 GPRETLLYVICIQPN----GQHPDYLAVIDVDPQSKTYQQVRNTLRAG------LAMVTDILISLDDRYLYTSNWM-HGD 94 (136)
Q Consensus 26 ap~Ek~dYvatldvd----~~spdyl~VIdv~p~s~~y~ev~~~~~a~------~~~~gD~l~s~drr~L~vp~l~-sgr 94 (136)
.|..+.+|++.-... .+.-+.+.++|... .++++++... -.....+.++++.|+||+.+.. ++.
T Consensus 58 spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t-----~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~ 132 (361)
T 2oiz_A 58 SNDGKKIYTMTTYHERITRGKRSDVVEVWDADK-----LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp CTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT-----CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE
T ss_pred CCCCCEEEEEEecccccccCCCCCEEEEEECcC-----CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCe
Confidence 577888888864221 12335677887542 2444443200 0112344478899999999986 789
Q ss_pred EEEEeCCCCCCCeEeEE-Eeecce
Q psy10678 95 IRQYDIRDTAHPVLVGQ-IFLGGK 117 (136)
Q Consensus 95 Iyv~DvsDP~~PkL~~~-v~~gg~ 117 (136)
|.+||+..- +++++ |.++|.
T Consensus 133 v~v~d~~~~---~~~~~~i~~~~~ 153 (361)
T 2oiz_A 133 IGIVDVAKG---DYVEDVTAAAGC 153 (361)
T ss_dssp EEEEETTTT---EEEEEEGGGTTE
T ss_pred EEEEECCCC---cEEEEEecCCCc
Confidence 999999421 67788 777664
No 13
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.86 E-value=0.15 Score=43.32 Aligned_cols=74 Identities=20% Similarity=0.259 Sum_probs=46.3
Q ss_pred CCCCceeEEEE-ecCCCCCCCeEEEEeeCCCCCccccc-ccccccCCCcccc----ccCCCCCCeEEEccC----CCCcE
Q psy10678 26 GPRETLLYVIC-IQPNGQHPDYLAVIDVDPQSKTYQQV-RNTLRAGLAMVTD----ILISLDDRYLYTSNW----MHGDI 95 (136)
Q Consensus 26 ap~Ek~dYvat-ldvd~~spdyl~VIdv~p~s~~y~ev-~~~~~a~~~~~gD----~l~s~drr~L~vp~l----~sgrI 95 (136)
.|..+..|+.+ +..|.+.-+-.+|+|+......|..| ++.+ +..+-.+. .-++++.++||+++| .++.|
T Consensus 429 ~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i 507 (543)
T 1nir_A 429 HPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEW-ADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSAL 507 (543)
T ss_dssp CTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHH-HCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEE
T ss_pred CCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhh-cccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeE
Confidence 45555555543 23222234589999999887776665 4422 01111111 116889999999999 36999
Q ss_pred EEEeC
Q psy10678 96 RQYDI 100 (136)
Q Consensus 96 yv~Dv 100 (136)
.+||.
T Consensus 508 ~v~D~ 512 (543)
T 1nir_A 508 VVVDD 512 (543)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99998
No 14
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.85 E-value=2.5 Score=30.78 Aligned_cols=69 Identities=13% Similarity=0.193 Sum_probs=43.3
Q ss_pred CeEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEccCCCCcEEEEeC-CCCCCCeEeEEEeec
Q psy10678 45 DYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSNWMHGDIRQYDI-RDTAHPVLVGQIFLG 115 (136)
Q Consensus 45 dyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~l~sgrIyv~Dv-sDP~~PkL~~~v~~g 115 (136)
..+.+.|......+... +..... ......+-.+++.++||+.+..++.|.+|++ .+..+.+....+.+|
T Consensus 253 ~~i~v~d~~~~~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g 322 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSK-EGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG 322 (343)
T ss_dssp TEEEEEEECTTSCCEEE-EEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS
T ss_pred CEEEEEEEcCCCCceEE-eeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC
Confidence 46777777754333222 222211 1113444467889999999999999999987 444556666776664
No 15
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.83 E-value=3.5 Score=29.97 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=32.3
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeCC-CCCCCeEeEEEeecce
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDIR-DTAHPVLVGQIFLGGK 117 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~Dvs-DP~~PkL~~~v~~gg~ 117 (136)
+..+++.++||+.+...+.|++||+. +....+....+..++.
T Consensus 236 i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~ 278 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ 278 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS
T ss_pred eEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc
Confidence 44678899999999999999999994 3555677666666553
No 16
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=89.63 E-value=0.35 Score=39.98 Aligned_cols=80 Identities=13% Similarity=-0.050 Sum_probs=54.5
Q ss_pred CCCCceeEEEEecCC----CCCCCeEEEEeeCCCCCcccccccccccCC--------CccccccCCCCCCeEEEccCC-C
Q psy10678 26 GPRETLLYVICIQPN----GQHPDYLAVIDVDPQSKTYQQVRNTLRAGL--------AMVTDILISLDDRYLYTSNWM-H 92 (136)
Q Consensus 26 ap~Ek~dYvatldvd----~~spdyl~VIdv~p~s~~y~ev~~~~~a~~--------~~~gD~l~s~drr~L~vp~l~-s 92 (136)
+|-.+..||+.-+.. .+.-+.+.|||.... ++++++. .. .....+-+|+|.|+||+.++. +
T Consensus 73 spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-----~vv~~I~-v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 73 GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-----LPIADIE-LPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp CTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-----CEEEEEE-ETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred CCCCCEEEEEcccccccccCCCCCEEEEEECCCC-----CEEEEEE-CCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 677888888875432 244688899988774 5666652 11 111233378899999999997 6
Q ss_pred CcEEE--EeCCCCCCCeEeEEEeecce
Q psy10678 93 GDIRQ--YDIRDTAHPVLVGQIFLGGK 117 (136)
Q Consensus 93 grIyv--~DvsDP~~PkL~~~v~~gg~ 117 (136)
+.|.+ +|+.. +++|-+||.
T Consensus 147 ~~v~V~~iD~~t------v~~i~v~~~ 167 (368)
T 1mda_H 147 AAAGLSVPGASD------DQLTKSASC 167 (368)
T ss_dssp CEEEEEETTTEE------EEEEECSSC
T ss_pred CeEEEEEEchhh------ceEEECCCc
Confidence 77888 88833 578877763
No 17
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.11 E-value=1.6 Score=32.77 Aligned_cols=41 Identities=29% Similarity=0.433 Sum_probs=31.9
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
+.++++.++||+.+..++.|++||+......+...++..+|
T Consensus 245 i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~ 285 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG 285 (347)
T ss_dssp EEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC
Confidence 44788999999999999999999995334566777776643
No 18
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=88.25 E-value=1.4 Score=36.38 Aligned_cols=59 Identities=7% Similarity=-0.146 Sum_probs=43.0
Q ss_pred eEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEccC---------CCCcEEEEeC-CCCCCCeEeEEEeec
Q psy10678 46 YLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSNW---------MHGDIRQYDI-RDTAHPVLVGQIFLG 115 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~l---------~sgrIyv~Dv-sDP~~PkL~~~v~~g 115 (136)
-..|||.+-. ++++.+..... . -+.+|+|.++||+.+. +++.|.+||+ +. +++++|.+|
T Consensus 47 ~vsvID~~t~-----~v~~~i~vG~~-P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~----~vv~~I~v~ 115 (368)
T 1mda_H 47 ENWVSCAGCG-----VTLGHSLGAFL-S-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF----LPIADIELP 115 (368)
T ss_dssp EEEEEETTTT-----EEEEEEEECTT-C-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC----CEEEEEEET
T ss_pred eEEEEECCCC-----eEEEEEeCCCC-C-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC----CEEEEEECC
Confidence 6778886653 77776632211 1 3668999999999984 6788999988 43 678999988
No 19
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=88.25 E-value=6.1 Score=29.01 Aligned_cols=38 Identities=11% Similarity=0.257 Sum_probs=28.9
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeec
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 115 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~g 115 (136)
.+++.++||+.+..++.|++||+.+-+..+...++..|
T Consensus 183 ~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 183 FTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN 220 (331)
T ss_dssp ECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC
Confidence 67899999999999999999999544433435555544
No 20
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=85.62 E-value=4.2 Score=30.68 Aligned_cols=40 Identities=28% Similarity=0.469 Sum_probs=31.1
Q ss_pred cccCCCCCCeEEEccCC-CCcEEEEeCC-CCCCCeEeEEEee
Q psy10678 75 DILISLDDRYLYTSNWM-HGDIRQYDIR-DTAHPVLVGQIFL 114 (136)
Q Consensus 75 D~l~s~drr~L~vp~l~-sgrIyv~Dvs-DP~~PkL~~~v~~ 114 (136)
++.++++.++||+.+.. ++.|.+||+. +..+.+....+..
T Consensus 263 ~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~ 304 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT 304 (361)
T ss_dssp EEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred cEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC
Confidence 45578899999999999 9999999993 4456666666654
No 21
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=85.26 E-value=6.1 Score=28.86 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=28.4
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecce
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGK 117 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~ 117 (136)
+-.+++.++||+. -.++.|++||+.. -++.+++.++|.
T Consensus 300 ~~~s~dg~~l~~~-~~~~~v~v~d~~~---~~~~~~~~~~~~ 337 (349)
T 1jmx_B 300 VAFDKKGDKLYLG-GTFNDLAVFNPDT---LEKVKNIKLPGG 337 (349)
T ss_dssp EEECSSSSCEEEE-SBSSEEEEEETTT---TEEEEEEECSSS
T ss_pred eEECCCCCEEEEe-cCCCeEEEEeccc---cceeeeeecCCC
Confidence 3367788999995 4569999999832 367888888743
No 22
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=84.01 E-value=5.6 Score=28.81 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=28.0
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
+..+++.++||+.+. ++.|++||+.. -++.+++.+|+
T Consensus 285 ~~~s~dg~~l~~~~~-~~~i~v~d~~~---~~~~~~~~~~~ 321 (337)
T 1pby_B 285 VNVSTDGSTVWLGGA-LGDLAAYDAET---LEKKGQVDLPG 321 (337)
T ss_dssp EEECTTSCEEEEESB-SSEEEEEETTT---CCEEEEEECGG
T ss_pred EEECCCCCEEEEEcC-CCcEEEEECcC---CcEEEEEEcCC
Confidence 336778899999855 89999999843 25678887774
No 23
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=83.99 E-value=8.9 Score=28.11 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=29.6
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecce
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGK 117 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~ 117 (136)
.+++.++||+.+..++.|++||+.. -++..++..|+.
T Consensus 279 ~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~ 315 (353)
T 3vgz_A 279 FNPARNEAYVTHRQAGKVSVIDAKS---YKVVKTFDTPTH 315 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTT---TEEEEEEECCSE
T ss_pred ECCCCCEEEEEECCCCeEEEEECCC---CeEEEEEecCCC
Confidence 5778899999999999999999843 366777776653
No 24
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=82.50 E-value=3.3 Score=34.96 Aligned_cols=78 Identities=14% Similarity=0.093 Sum_probs=46.9
Q ss_pred CCCCceeEEEEecCCCCCCCeEEEEeeCCCCCcccccccccccCCCccccccCCC----CCCeEEEccCCCCcEEEEeCC
Q psy10678 26 GPRETLLYVICIQPNGQHPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISL----DDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 26 ap~Ek~dYvatldvd~~spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~----drr~L~vp~l~sgrIyv~Dvs 101 (136)
.|..+..|++..| +.+.++|.+... .+++..+.. -...-.+-+|+ +.++||+.+..++.|.+||..
T Consensus 187 spdg~~l~v~~~d------~~V~v~D~~~~t---~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 187 SASGRYLLVIGRD------ARIDMIDLWAKE---PTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp CTTSCEEEEEETT------SEEEEEETTSSS---CEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred CCCCCEEEEECCC------CeEEEEECcCCC---CcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 4666666666432 668888875221 344443321 11112223678 999999999999999999983
Q ss_pred CCCCCeEeEEEeecc
Q psy10678 102 DTAHPVLVGQIFLGG 116 (136)
Q Consensus 102 DP~~PkL~~~v~~gg 116 (136)
. =++.++|.++|
T Consensus 257 t---~~~~~~i~~~g 268 (543)
T 1nir_A 257 T---LEPKQIVSTRG 268 (543)
T ss_dssp T---CCEEEEEECCE
T ss_pred c---cccceeecccC
Confidence 2 23455665543
No 25
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=79.30 E-value=13 Score=27.89 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=40.6
Q ss_pred CCCCceeEEEEecCCCCCCCeEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEccCCCCcEEEEeC
Q psy10678 26 GPRETLLYVICIQPNGQHPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSNWMHGDIRQYDI 100 (136)
Q Consensus 26 ap~Ek~dYvatldvd~~spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~l~sgrIyv~Dv 100 (136)
.|..+..|++.-+ ..+-+.|.++++....... +..... -....++.++++.++||+.+..+++|.+|++
T Consensus 267 spdg~~l~v~~~~----~~~~i~v~~~~~~~g~~~~-~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 267 SPDGKYLYASNRL----KADGVAIFKVDETNGTLTK-VGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CTTSSEEEEEECS----SSCEEEEEEECTTTCCEEE-EEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEECCC----CCCEEEEEEEcCCCCcEEE-eeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 4555555544322 1345777777754433222 222211 1122344478899999999999999999776
No 26
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=78.94 E-value=7.2 Score=31.00 Aligned_cols=62 Identities=15% Similarity=0.166 Sum_probs=40.4
Q ss_pred CeEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeec
Q psy10678 45 DYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 115 (136)
Q Consensus 45 dyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~g 115 (136)
..+.+||..- +++++........++.- ++.+.+.||+.+|.+++|++||.. .-++.++|..|
T Consensus 44 s~v~~iD~~t-----g~v~~~i~l~~~~fgeG-i~~~g~~lyv~t~~~~~v~viD~~---t~~v~~~i~~g 105 (266)
T 2iwa_A 44 SSVRQVALQT-----GKVENIHKMDDSYFGEG-LTLLNEKLYQVVWLKNIGFIYDRR---TLSNIKNFTHQ 105 (266)
T ss_dssp CEEEEEETTT-----CCEEEEEECCTTCCEEE-EEEETTEEEEEETTCSEEEEEETT---TTEEEEEEECC
T ss_pred CEEEEEECCC-----CCEEEEEecCCCcceEE-EEEeCCEEEEEEecCCEEEEEECC---CCcEEEEEECC
Confidence 4566666544 35655442111223321 344577999999999999999983 33788999888
No 27
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=78.11 E-value=2.6 Score=36.49 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=29.5
Q ss_pred cCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEee
Q psy10678 77 LISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL 114 (136)
Q Consensus 77 l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~ 114 (136)
.++++.||||+.+..+++|.+||+.. -+++..|.+
T Consensus 348 ~~~pdgr~~~va~~~sn~V~ViD~~t---~kl~~~i~v 382 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLVVIDTKE---GKLVAIEDT 382 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEEC
T ss_pred eECCCCCEEEEEeCCCCeEEEEECCC---CcEEEEEec
Confidence 36789999999999999999999943 267888888
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=76.14 E-value=5.8 Score=31.49 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=38.9
Q ss_pred eEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 46 YLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
.+.+||..- ++++....-....+|.- +....+.||+-.|.++++++||. ..-++.++|..+|
T Consensus 44 ~v~~vD~~t-----gkv~~~~~l~~~~fgeG-i~~~~~~ly~ltw~~~~v~v~D~---~tl~~~~ti~~~~ 105 (243)
T 3mbr_X 44 SVRKVDLET-----GRILQRAEVPPPYFGAG-IVAWRDRLIQLTWRNHEGFVYDL---ATLTPRARFRYPG 105 (243)
T ss_dssp EEEEEETTT-----CCEEEEEECCTTCCEEE-EEEETTEEEEEESSSSEEEEEET---TTTEEEEEEECSS
T ss_pred eEEEEECCC-----CCEEEEEeCCCCcceeE-EEEeCCEEEEEEeeCCEEEEEEC---CcCcEEEEEeCCC
Confidence 455565543 36655442112334442 23456789999999999999987 3347788888765
No 29
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=75.83 E-value=4.2 Score=32.77 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=28.1
Q ss_pred CCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 79 SLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 79 s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
+.+.+.||+..|.++++++||.. .-++.++|..+|
T Consensus 93 t~~g~~ly~ltw~~~~v~v~D~~---t~~~~~ti~~~~ 127 (262)
T 3nol_A 93 SDWKDKIVGLTWKNGLGFVWNIR---NLRQVRSFNYDG 127 (262)
T ss_dssp EEETTEEEEEESSSSEEEEEETT---TCCEEEEEECSS
T ss_pred EEeCCEEEEEEeeCCEEEEEECc---cCcEEEEEECCC
Confidence 45678999999999999999873 336788888865
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=75.67 E-value=5.5 Score=32.33 Aligned_cols=42 Identities=17% Similarity=0.273 Sum_probs=30.8
Q ss_pred CccccccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 71 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 71 ~~~gD~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
..+|.- ++.+.+.||+..|.++++++||.. .-++.++|..+|
T Consensus 95 ~~FgeG-it~~g~~Ly~ltw~~~~v~V~D~~---Tl~~~~ti~~~~ 136 (268)
T 3nok_A 95 NIFAEG-LASDGERLYQLTWTEGLLFTWSGM---PPQRERTTRYSG 136 (268)
T ss_dssp TCCEEE-EEECSSCEEEEESSSCEEEEEETT---TTEEEEEEECSS
T ss_pred CcceeE-EEEeCCEEEEEEccCCEEEEEECC---cCcEEEEEeCCC
Confidence 344432 345678999999999999999873 347788888765
No 31
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=73.93 E-value=2.5 Score=31.16 Aligned_cols=26 Identities=12% Similarity=0.334 Sum_probs=23.4
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDT 103 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP 103 (136)
.+++.++||+.+-.++.|++||++++
T Consensus 280 ~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 280 LNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred ECCCCCEEEEecCCCCcEEEEEecCC
Confidence 67899999999999999999999763
No 32
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=73.07 E-value=19 Score=27.56 Aligned_cols=27 Identities=11% Similarity=0.294 Sum_probs=23.2
Q ss_pred cccCCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 75 DILISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 75 D~l~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+..+++.++||+.++..++|++||+.
T Consensus 149 ~~~~spdG~~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 149 GMVFDPTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCCEEEEEEEC
Confidence 344688899999999999999999995
No 33
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=71.57 E-value=15 Score=26.95 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=26.9
Q ss_pred cCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeec
Q psy10678 77 LISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 115 (136)
Q Consensus 77 l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~g 115 (136)
..+.+.++||+.+..++.|++||... -++..++.++
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~ 130 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKT---GEVKGRLVLD 130 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTT---CCEEEEEESC
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCC---CeeEEEEecC
Confidence 36778899999999999999999843 2344555554
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=70.22 E-value=15 Score=26.84 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=26.7
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
.+++.++|+..+. .|.|++||+....+.+..+.+..++
T Consensus 264 ~s~~g~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~ 301 (379)
T 3jrp_A 264 WSLSGNVLALSGG-DNKVTLWKENLEGKWEPAGEVHQGG 301 (379)
T ss_dssp ECSSSCCEEEEES-SSSEEEEEEEETTEEEEEEEEC---
T ss_pred EcCCCCEEEEecC-CCcEEEEeCCCCCccccccceeccc
Confidence 6778888888876 8999999996555555556665544
No 35
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=69.52 E-value=4 Score=32.49 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=27.5
Q ss_pred CCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecce
Q psy10678 82 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGK 117 (136)
Q Consensus 82 rr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~ 117 (136)
+.+||+.+|.++.|.++|+. .=+..++|.++|.
T Consensus 161 dg~lyvn~~~~~~V~vID~~---tg~V~~~I~~~g~ 193 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAK---DGTLLGWILLPNL 193 (266)
T ss_dssp TTEEEEEETTSSEEEEEETT---TCCEEEEEECHHH
T ss_pred CCEEEEecCCCCeEEEEECC---CCcEEEEEECCCc
Confidence 56899999999999999872 3367899999865
No 36
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=68.43 E-value=6.1 Score=29.51 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=28.3
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEee
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL 114 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~ 114 (136)
++++.++||+.+...+.|.+||+......+...++..
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~ 129 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH 129 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec
Confidence 5789999999999999999999953344555555544
No 37
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=66.99 E-value=4.2 Score=29.85 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=21.8
Q ss_pred CCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 80 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 80 ~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
.+.++||+.+|.+++|+++|.. .-++..+|.+|+
T Consensus 216 ~d~~~lyva~~~~~~v~~~d~~---~g~~~~~i~~g~ 249 (267)
T 1npe_A 216 SYGKNLYYTDWKTNSVIAMDLA---ISKEMDTFHPHK 249 (267)
T ss_dssp EETTEEEEEETTTTEEEEEETT---TTEEEEEECCSS
T ss_pred EeCCEEEEEECCCCeEEEEeCC---CCCceEEEcccc
Confidence 3566777777777777777652 235666666654
No 38
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=65.73 E-value=25 Score=25.54 Aligned_cols=62 Identities=23% Similarity=0.160 Sum_probs=37.7
Q ss_pred CeEEEEeeCCCCCcccccccccccCCC--ccccccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeec
Q psy10678 45 DYLAVIDVDPQSKTYQQVRNTLRAGLA--MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 115 (136)
Q Consensus 45 dyl~VIdv~p~s~~y~ev~~~~~a~~~--~~gD~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~g 115 (136)
..+.++|... ++++..+. ... ....+..+++.++||+.+..++.|++||+.. .++..++.++
T Consensus 21 ~~v~~~d~~~-----~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---~~~~~~~~~~ 84 (349)
T 1jmx_B 21 NNLHVVDVAS-----DTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---CKNTFHANLS 84 (349)
T ss_dssp TEEEEEETTT-----TEEEEEEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEESC
T ss_pred CeEEEEECCC-----CcEEEEEe-cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC---CcEEEEEEcc
Confidence 4567777543 24433331 111 1233336778899999999999999999843 3455555553
No 39
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=62.89 E-value=9.6 Score=30.04 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=41.9
Q ss_pred CCCeEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 43 HPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 43 spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
=|+|-++|+..|.+..-+++.|-. ..++++.||+-....++|+.+|.+ =++..++.++|
T Consensus 10 l~~y~~~~~~~~l~g~~~~lSGla-----------~~~~~~~L~aV~d~~~~I~~ld~~----g~v~~~i~l~g 68 (255)
T 3qqz_A 10 FQNYHATIDGKEIAGITNNISSLT-----------WSAQSNTLFSTINKPAAIVEMTTN----GDLIRTIPLDF 68 (255)
T ss_dssp CTTCEEEEEEEECTTCCSCEEEEE-----------EETTTTEEEEEEETTEEEEEEETT----CCEEEEEECSS
T ss_pred ccceEEEEeceECCCcccCcceeE-----------EeCCCCEEEEEECCCCeEEEEeCC----CCEEEEEecCC
Confidence 478888888666654444544421 224678899888889999999986 25788888876
No 40
>3ks7_A Putative putative pngase F; putative peptide:N-glycosidase F (pngase F), structural GENO joint center for structural genomics; 2.30A {Bacteroides fragilis nctc 9343}
Probab=62.43 E-value=1.9 Score=37.56 Aligned_cols=40 Identities=30% Similarity=0.503 Sum_probs=35.8
Q ss_pred CCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecceecc
Q psy10678 80 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQS 120 (136)
Q Consensus 80 ~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~~~~ 120 (136)
.+||=.|++.|..+-.|+.|||| ..|.|.|.+++|..+..
T Consensus 154 ~k~~pvyi~~W~d~v~W~qDITd-L~pLL~Gev~iGi~i~n 193 (397)
T 3ks7_A 154 SKRRPVYIPKWESNVTWQQDITD-LYPLLEGEAYVGIYIDT 193 (397)
T ss_dssp TTTSCTTCCCCCSCEEEEEECGG-GGGGTBEEEEEEEEECC
T ss_pred hcCCcccccccccCceEEeEchh-hHHhhCCCeEEEEEecc
Confidence 56899999999999999999998 89999999999965543
No 41
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=61.80 E-value=9.2 Score=30.77 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=30.8
Q ss_pred CCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecceecc
Q psy10678 82 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQS 120 (136)
Q Consensus 82 rr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~~~~ 120 (136)
+.+||+.+|.+++|+++| |+.=++.++|.++|+...
T Consensus 181 ~G~lyan~w~~~~I~vID---p~tG~V~~~Id~~~L~~~ 216 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRID---PETGKVTGIIDLNGILAE 216 (262)
T ss_dssp TTEEEEEETTSSEEEEEC---TTTCBEEEEEECTTGGGG
T ss_pred CCEEEEEEccCCeEEEEE---CCCCcEEEEEECCcCccc
Confidence 567999999999999996 566689999999987654
No 42
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=61.43 E-value=21 Score=29.99 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=28.4
Q ss_pred CCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecce
Q psy10678 82 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGK 117 (136)
Q Consensus 82 rr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~ 117 (136)
++||+++|=.++...+||...+ .++++.+.||+.
T Consensus 243 ~gyLivSsQG~~s~~Vydr~~~--~~~vg~f~Ig~~ 276 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYDRQGK--NKYVADFRITDG 276 (355)
T ss_dssp CEEEEEEEGGGTEEEEEESSTT--CCEEEEEEECCC
T ss_pred CEEEEEEcCCCCEEEEEECCCC--CcEEEEEEecCC
Confidence 5699999999999999999543 368899988874
No 43
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=59.89 E-value=29 Score=24.53 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=22.8
Q ss_pred cccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeE
Q psy10678 75 DILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVL 108 (136)
Q Consensus 75 D~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL 108 (136)
.+..+++.++|+..+ ..+.|++||++....-+-
T Consensus 311 ~~~~s~~~~~l~s~~-~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 311 SVSWNLTGTILSSAG-DDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp EEEECSSSCCEEEEE-TTSCEEEEEECTTSCEEE
T ss_pred EEEEcCCCCEEEEec-CCCcEEEEecCcCcchhh
Confidence 333667777777666 678999999976554444
No 44
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=59.06 E-value=7.4 Score=29.87 Aligned_cols=35 Identities=14% Similarity=0.394 Sum_probs=28.1
Q ss_pred CCCCCCeEEEcc----CCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 78 ISLDDRYLYTSN----WMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 78 ~s~drr~L~vp~----l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
.+++.++||+.+ +.+++|++||.. =++..+|.+|-
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~----g~~~~~i~~G~ 312 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ----GKLIDEFYVGI 312 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT----CCEEEEEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC----CCEEEEEEecc
Confidence 456789999999 889999999874 36778887753
No 45
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=56.65 E-value=13 Score=28.49 Aligned_cols=32 Identities=22% Similarity=0.558 Sum_probs=24.2
Q ss_pred CCCeEEEccC-CCCcEEEEeCCCCCCCeEeEEEeec
Q psy10678 81 DDRYLYTSNW-MHGDIRQYDIRDTAHPVLVGQIFLG 115 (136)
Q Consensus 81 drr~L~vp~l-~sgrIyv~DvsDP~~PkL~~~v~~g 115 (136)
+.++||+.+| .++.|++||... -++..+|.+|
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t---~~~~~~i~~g 171 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTET---DKVVDELTIG 171 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTT---TEEEEEEECS
T ss_pred ECCEEEEEcCCCCCEEEEEECCC---CeEEEEEEcC
Confidence 7889999999 599999999832 2555666554
No 46
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=55.82 E-value=13 Score=29.45 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=31.6
Q ss_pred CCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecceeccC
Q psy10678 81 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSD 121 (136)
Q Consensus 81 drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~~~~~ 121 (136)
.+.+||+..|.+.+|.++| |+.=+..++|.++|+....
T Consensus 158 ~~G~lyanvw~s~~I~vID---p~tG~V~~~idl~~l~~~~ 195 (243)
T 3mbr_X 158 VNGELLANVWLTSRIARID---PASGKVVAWIDLQALVPDA 195 (243)
T ss_dssp ETTEEEEEETTTTEEEEEC---TTTCBEEEEEECGGGSTTT
T ss_pred eCCEEEEEECCCCeEEEEE---CCCCCEEEEEECCcCcccc
Confidence 3667999999999999996 5566899999999987543
No 47
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=55.04 E-value=12 Score=30.88 Aligned_cols=24 Identities=29% Similarity=0.594 Sum_probs=22.4
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.|+|.++||+..-...+|++||+.
T Consensus 228 ~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 228 ISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCeEEEEEEC
Confidence 688999999999999999999995
No 48
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=54.99 E-value=18 Score=26.10 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=27.2
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeec
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 115 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~g 115 (136)
+..+++.++||+.+-..+.|++||+.+- ++..++.++
T Consensus 39 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~~~ 75 (337)
T 1pby_B 39 PMVAPGGRIAYATVNKSESLVKIDLVTG---ETLGRIDLS 75 (337)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTC---CEEEEEECC
T ss_pred eEEcCCCCEEEEEeCCCCeEEEEECCCC---CeEeeEEcC
Confidence 3367788999999999999999998432 344555544
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=54.39 E-value=40 Score=25.62 Aligned_cols=28 Identities=36% Similarity=0.581 Sum_probs=23.3
Q ss_pred ccccCCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 74 TDILISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 74 gD~l~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
..+-.+++.++|++.+-..+.|++||+.
T Consensus 404 ~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 404 TGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 3444678899999999999999999984
No 50
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=54.26 E-value=6.9 Score=28.57 Aligned_cols=29 Identities=17% Similarity=0.118 Sum_probs=22.7
Q ss_pred cccCCCCCCeEEEccCCCCcEEEEeCCCC
Q psy10678 75 DILISLDDRYLYTSNWMHGDIRQYDIRDT 103 (136)
Q Consensus 75 D~l~s~drr~L~vp~l~sgrIyv~DvsDP 103 (136)
.+-.+++.++|++.+-..+.|++||+++.
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 33367788999887778999999999654
No 51
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=53.71 E-value=11 Score=30.60 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=30.1
Q ss_pred CCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecceec
Q psy10678 82 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQ 119 (136)
Q Consensus 82 rr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg~~~ 119 (136)
+.+||+..|.+++|.++| |+.=++.++|.++|+..
T Consensus 190 dG~lyanvw~s~~I~vID---p~TG~V~~~Idl~~L~~ 224 (268)
T 3nok_A 190 NGVIYANIWHSSDVLEID---PATGTVVGVIDASALTR 224 (268)
T ss_dssp TTEEEEEETTCSEEEEEC---TTTCBEEEEEECHHHHH
T ss_pred CCEEEEEECCCCeEEEEe---CCCCcEEEEEECCCCcc
Confidence 557999999999999996 56668999999998763
No 52
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=52.51 E-value=19 Score=28.34 Aligned_cols=41 Identities=12% Similarity=-0.062 Sum_probs=28.8
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeCC--CCCCCeEeEEEeecc
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDIR--DTAHPVLVGQIFLGG 116 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~Dvs--DP~~PkL~~~v~~gg 116 (136)
+..+++.++|++.+-..+.|++||++ ...+.++..++...+
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~ 355 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPY 355 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSS
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCC
Confidence 33566789999999889999999993 333345555555443
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=51.65 E-value=76 Score=24.02 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=21.7
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+++.++||+.+...++|++||+.
T Consensus 310 ~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 310 SGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp ECSSTTEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEEEEecCCCEEEEEECC
Confidence 577889999999999999999984
No 54
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=51.62 E-value=72 Score=23.75 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=22.7
Q ss_pred cccCCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 75 DILISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 75 D~l~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+..+++.++||+.+-..+.|++||+.
T Consensus 162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 333677899999999999999999984
No 55
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=50.45 E-value=23 Score=26.52 Aligned_cols=35 Identities=11% Similarity=0.273 Sum_probs=27.2
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeec
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 115 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~g 115 (136)
.+++.++||+.+-..++|++||+.. -++..++.+|
T Consensus 251 ~s~dg~~l~~s~~~d~~v~v~d~~~---~~~~~~~~~~ 285 (391)
T 1l0q_A 251 VTPDGKKVYVALSFXNTVSVIDTAT---NTITATMAVG 285 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEECS
T ss_pred EccCCCEEEEEcCCCCEEEEEECCC---CcEEEEEECC
Confidence 6788999999998999999999843 3555555544
No 56
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=47.46 E-value=8.7 Score=29.08 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=20.9
Q ss_pred CCCCCeEEEccCCCCcEEEEeCC
Q psy10678 79 SLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 79 s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
+.+.++||+.+..+++|++||+.
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBC
T ss_pred CcCCCEEEEEeCCCCEEEEEEeC
Confidence 56788999999999999999984
No 57
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=46.85 E-value=12 Score=33.54 Aligned_cols=24 Identities=13% Similarity=0.259 Sum_probs=22.8
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.|+|.+|+|+.++.+++|.+||+.
T Consensus 284 ~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 284 MAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp ECTTSSEEEEECTTSSBEEEEEGG
T ss_pred EcCCCCEEEEeCCCCCeEEEEECc
Confidence 689999999999999999999994
No 58
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=45.82 E-value=32 Score=30.92 Aligned_cols=70 Identities=9% Similarity=0.060 Sum_probs=43.9
Q ss_pred CCCCeEEEEeeCCCCCcccccccccccCCCccccccCC-CCCCeEEEc-----------------cCCCCcEEEEeCCCC
Q psy10678 42 QHPDYLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILIS-LDDRYLYTS-----------------NWMHGDIRQYDIRDT 103 (136)
Q Consensus 42 ~spdyl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s-~drr~L~vp-----------------~l~sgrIyv~DvsDP 103 (136)
...+-++|||.+-+ .-++|+ .+.....-+|=.+.+ ++-+|||+. ++-.+.+-++|+.
T Consensus 109 ~~~~rVavIdl~t~--~~~~ii-~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~-- 183 (595)
T 1fwx_A 109 KANTRVARVRCDVM--KCDAIL-EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD-- 183 (595)
T ss_dssp TTTTEEEEEETTTT--EEEEEE-ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT--
T ss_pred CCCCEEEEEECCCc--eEeeEE-eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECC--
Confidence 34567899998876 112233 221112223322234 677777777 5888899999983
Q ss_pred CCCeEeEEEeecce
Q psy10678 104 AHPVLVGQIFLGGK 117 (136)
Q Consensus 104 ~~PkL~~~v~~gg~ 117 (136)
.-+++.||.+||.
T Consensus 184 -t~~v~~qI~Vgg~ 196 (595)
T 1fwx_A 184 -KWEVAWQVLVSGN 196 (595)
T ss_dssp -TTEEEEEEEESSC
T ss_pred -CCeEEEEEEeCCC
Confidence 3489999999883
No 59
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=43.83 E-value=15 Score=33.71 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=50.2
Q ss_pred ceeEEEEecC--------CCCCCC----eEEEEeeCCCCCccccccccccc-CCCccccccCCCCCCeEEEccCCCCcEE
Q psy10678 30 TLLYVICIQP--------NGQHPD----YLAVIDVDPQSKTYQQVRNTLRA-GLAMVTDILISLDDRYLYTSNWMHGDIR 96 (136)
Q Consensus 30 k~dYvatldv--------d~~spd----yl~VIdv~p~s~~y~ev~~~~~a-~~~~~gD~l~s~drr~L~vp~l~sgrIy 96 (136)
.-||++.++. +++--. -..|||-.........++--.+. -+|+=-| .++|-+|+|+.+.+|.++.
T Consensus 271 e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~--vsPDGkyi~v~GKLsptvt 348 (638)
T 3sbq_A 271 ERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCN--TSSDGKYFIAAGKLSPTCS 348 (638)
T ss_dssp SCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEE--ECTTSCEEEEECTTSSBEE
T ss_pred cccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccccCCceEEEEeCCCCCccee--eCCCCCEEEEcCCCCCeEE
Confidence 3499999987 222221 24577765421111123222211 1333334 6899999999999999999
Q ss_pred EEeCC-----------CCCCCeEeEEEeec
Q psy10678 97 QYDIR-----------DTAHPVLVGQIFLG 115 (136)
Q Consensus 97 v~Dvs-----------DP~~PkL~~~v~~g 115 (136)
|||++ +|+... ++++.+|
T Consensus 349 V~d~~k~~~~~~~k~~~~~~~~-~ae~e~G 377 (638)
T 3sbq_A 349 MIAIDKLPDLFAGKLADPRDVI-VGEPELG 377 (638)
T ss_dssp EEEGGGHHHHHTTCCSCGGGGE-EECCBCC
T ss_pred EEEeehhhhhhhccccCcccce-EeeccCC
Confidence 99995 555543 6787765
No 60
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=43.72 E-value=48 Score=27.82 Aligned_cols=73 Identities=14% Similarity=0.195 Sum_probs=42.4
Q ss_pred CCeEEEEeeCCCCCccccccccc-c--cC-CCcccccc-CCC-CC-CeEEEccCCCCcEEEEeCCCC----CCCeEeEEE
Q psy10678 44 PDYLAVIDVDPQSKTYQQVRNTL-R--AG-LAMVTDIL-ISL-DD-RYLYTSNWMHGDIRQYDIRDT----AHPVLVGQI 112 (136)
Q Consensus 44 pdyl~VIdv~p~s~~y~ev~~~~-~--a~-~~~~gD~l-~s~-dr-r~L~vp~l~sgrIyv~DvsDP----~~PkL~~~v 112 (136)
.+-+++++++|...+-..+-... + +. ..-+|=-+ -+. .. -|+|+.+= +|++.||++.+. ...+++.++
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEe
Confidence 45588999988775433331110 0 00 00111000 023 23 37777765 599999999654 577999999
Q ss_pred eecce
Q psy10678 113 FLGGK 117 (136)
Q Consensus 113 ~~gg~ 117 (136)
.+|+.
T Consensus 177 ~lgsq 181 (355)
T 3amr_A 177 KMNSQ 181 (355)
T ss_dssp ECSSC
T ss_pred cCCCC
Confidence 99874
No 61
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=43.06 E-value=33 Score=26.88 Aligned_cols=29 Identities=7% Similarity=0.216 Sum_probs=23.5
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHP 106 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~P 106 (136)
.+++.++|++.+-..|.|++||+.....|
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~ 313 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLK 313 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSC
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCC
Confidence 67778888888889999999999655544
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=42.11 E-value=58 Score=24.30 Aligned_cols=28 Identities=7% Similarity=0.190 Sum_probs=20.0
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAH 105 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~ 105 (136)
.+++.+.+++.+-..+.|++||+.+...
T Consensus 313 ~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 313 FAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred ECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 5666645666666789999999955443
No 63
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=37.74 E-value=45 Score=26.03 Aligned_cols=55 Identities=13% Similarity=0.050 Sum_probs=35.9
Q ss_pred eEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEcc--------CCCCcEEEEeCCCCCCCeEeE
Q psy10678 46 YLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSN--------WMHGDIRQYDIRDTAHPVLVG 110 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~--------l~sgrIyv~DvsDP~~PkL~~ 110 (136)
+-++||..+.|+||++..+-.. + ..+.+-||+|- |-.+-+.+|=++++-+|.--.
T Consensus 80 ~DV~VDlR~~SpTfG~w~~v~L------s----~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~~t~~Y~p~~e~ 142 (201)
T 4hn1_A 80 LDVVVDVRIGSPTFGRWEIVPM------D----AERNTAVYLTAGLGRAFLSLTDDATLVFLCSSGYAPAREH 142 (201)
T ss_dssp EEEEECCCBTCTTTTCEEEEEE------E----TTTCCEEEECTTCEEEEEECSTTEEEEEEESSCCCGGGEE
T ss_pred EEEEEECCCCCCCCCeEEEEEe------c----CCCCCEEEeCCcceEEEeecCCCeEEEEeCCCCcChhhcc
Confidence 5678999999999998654321 1 12567777773 334456677777777776533
No 64
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=37.30 E-value=20 Score=26.17 Aligned_cols=24 Identities=4% Similarity=-0.237 Sum_probs=20.9
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+.+.++||+.+..+++|+++|..
T Consensus 174 ~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 174 FDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETT
T ss_pred EcCCCCEEEEEECCCCEEEEEecC
Confidence 455689999999999999999983
No 65
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=33.20 E-value=25 Score=26.42 Aligned_cols=25 Identities=16% Similarity=0.442 Sum_probs=21.5
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRD 102 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsD 102 (136)
.+.+.++||+.....++|++||+..
T Consensus 192 ~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 192 VSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCC
Confidence 5667789999999999999999854
No 66
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=32.20 E-value=29 Score=26.07 Aligned_cols=23 Identities=17% Similarity=0.083 Sum_probs=17.8
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRD 102 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsD 102 (136)
.+++.++|+..+ .+.|++||+.+
T Consensus 360 ~s~~g~~l~s~s--d~~i~iw~~~~ 382 (383)
T 3ei3_B 360 FSPTGDVLASGM--GFNILIWNRED 382 (383)
T ss_dssp ECTTSSEEEEEE--TTEEEEEECC-
T ss_pred EecCccEEEEec--CCcEEEEecCC
Confidence 567788887775 79999999854
No 67
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=29.87 E-value=56 Score=22.54 Aligned_cols=27 Identities=22% Similarity=0.420 Sum_probs=20.3
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHP 106 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~P 106 (136)
.+++.++|++.+ .+.|++||+..+.++
T Consensus 49 ~spdg~~l~~~~--~~~i~~~d~~~~~~~ 75 (297)
T 2ojh_A 49 WSPDGKYLLLNS--EGLLYRLSLAGDPSP 75 (297)
T ss_dssp ECTTSSEEEEEE--TTEEEEEESSSCCSC
T ss_pred ECCCCCEEEEEc--CCeEEEEeCCCCCCc
Confidence 677888888875 789999999553333
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=29.83 E-value=65 Score=22.96 Aligned_cols=24 Identities=33% Similarity=0.546 Sum_probs=19.8
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDT 103 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP 103 (136)
.+++.++|+..+ .+.|++||+...
T Consensus 59 ~~~~~~~l~~~~--dg~i~iw~~~~~ 82 (337)
T 1gxr_A 59 ISNPTRHVYTGG--KGCVKVWDISHP 82 (337)
T ss_dssp ECSSSSEEEEEC--BSEEEEEETTST
T ss_pred EecCCcEEEEcC--CCeEEEEECCCC
Confidence 577888888887 899999999543
No 69
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=29.22 E-value=24 Score=26.32 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=21.1
Q ss_pred CCCCCCeEEEccCCCCcEEEEeC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDI 100 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dv 100 (136)
.+++.++||+.+-.+++|++||+
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEec
Confidence 67789999999999999999997
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=28.74 E-value=40 Score=25.74 Aligned_cols=26 Identities=19% Similarity=0.330 Sum_probs=22.3
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDT 103 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP 103 (136)
.+++.++|++.+-..+.|++||+.+.
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSS
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 56788999999988999999999543
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=28.54 E-value=1.7e+02 Score=21.34 Aligned_cols=25 Identities=16% Similarity=0.323 Sum_probs=20.7
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRD 102 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsD 102 (136)
.+++.++|++.+-..+.|++||+..
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTC
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCC
Confidence 5677888888888999999999943
No 72
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=28.53 E-value=52 Score=23.68 Aligned_cols=24 Identities=0% Similarity=0.277 Sum_probs=20.6
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+.+.++||+.+..++.|++||+.
T Consensus 275 ~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 275 FKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp ECTTSSEEEEEETTTTEEEEEECS
T ss_pred ECCCCCEEEEEeCCCCeEEEEeCC
Confidence 456778899999999999999984
No 73
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=28.09 E-value=48 Score=23.57 Aligned_cols=23 Identities=13% Similarity=0.160 Sum_probs=17.3
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+++.++|+-.+ ..+.|++||+.
T Consensus 292 ~spdg~~l~S~s-~D~~v~iWd~~ 314 (318)
T 4ggc_A 292 MSPDGATVASAA-ADETLRLWRCF 314 (318)
T ss_dssp ECTTSSCEEEEE-TTTEEEEECCS
T ss_pred EcCCCCEEEEEe-cCCeEEEEECC
Confidence 577777776555 57889999994
No 74
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=27.81 E-value=1e+02 Score=23.88 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=31.4
Q ss_pred eEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEcc--------CCCCcEEEEeCCCCCCCeE
Q psy10678 46 YLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSN--------WMHGDIRQYDIRDTAHPVL 108 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~--------l~sgrIyv~DvsDP~~PkL 108 (136)
+-++||..+.|+||++..+-.. + ..+.+-||+|- |-.+-+..|=++++-+|.-
T Consensus 106 ~DV~VDlR~~SpTfg~~~~~~L------s----~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~~s~~Y~p~~ 166 (205)
T 3ryk_A 106 YDVIVDLRKDSPTFKQWRGYIL------S----ADNHRQLLVPKGFAHGFCTLVPHTIVMYKVDEYYSADH 166 (205)
T ss_dssp EEEEEECCTTSTTTTCEEEEEE------E----TTTCCEEEECTTEEEEEEECSSSEEEEEEESSCCCTTT
T ss_pred EEEEEECCCCCCCCCeEEEEEe------c----CCCCCEEEeCCCceEEEEEcCCCEEEEEEcCCCcCCCC
Confidence 4468888889999988654321 1 12466666662 3334455565566666654
No 75
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=27.60 E-value=55 Score=25.58 Aligned_cols=27 Identities=11% Similarity=0.193 Sum_probs=22.0
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeCCC
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDIRD 102 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~DvsD 102 (136)
+..+++.++|++.+-..+.|++||+..
T Consensus 327 i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 336778888888888899999999944
No 76
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=27.00 E-value=33 Score=26.22 Aligned_cols=25 Identities=16% Similarity=0.351 Sum_probs=21.7
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeC
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDI 100 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~Dv 100 (136)
+..+++.++||+..+.+.+||.+|+
T Consensus 200 ia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 200 IVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp EEECTTSCEEEEEESSCSEEEEEEH
T ss_pred eEeccCCCEEEEEeCCCCeEEEEEH
Confidence 3367788999999999999999986
No 77
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=26.89 E-value=52 Score=24.99 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=13.6
Q ss_pred eEEEEeeCCCCCccccccc
Q psy10678 46 YLAVIDVDPQSKTYQQVRN 64 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~ 64 (136)
+-.+||..+.|+||++..+
T Consensus 83 ~dV~VD~R~~SpTfg~~~~ 101 (185)
T 1ep0_A 83 FDVAVDLRKNSDTYGEWTG 101 (185)
T ss_dssp EEEEEECCTTCTTTTCEEE
T ss_pred EEEEEECCCCCCCCCeEEE
Confidence 3456888888888887644
No 78
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=26.42 E-value=53 Score=24.87 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=13.5
Q ss_pred eEEEEeeCCCCCccccccc
Q psy10678 46 YLAVIDVDPQSKTYQQVRN 64 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~ 64 (136)
+-.+||..+.|+||++..+
T Consensus 83 ~dV~VD~R~~SpTfg~~~~ 101 (183)
T 1dzr_A 83 FDVAVDIRKESPTFGQWVG 101 (183)
T ss_dssp EEEEEECCTTCTTTTCEEE
T ss_pred EEEEEECCCCCCCCCeEEE
Confidence 3456788888888887543
No 79
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=25.26 E-value=33 Score=29.76 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=21.2
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+++.++||+..+.+++||+||..
T Consensus 254 vdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 254 IHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp ECTTTCCEEEEETTTTEEEEECHH
T ss_pred EcCCCCeEEEEECCCCEEEEEecc
Confidence 456789999999999999999974
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=24.65 E-value=47 Score=24.98 Aligned_cols=29 Identities=17% Similarity=0.409 Sum_probs=20.5
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHP 106 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~P 106 (136)
.+++.+.+++.+-..|.|++||+.+...|
T Consensus 298 ~~~~~~~~l~~g~~dg~i~vwd~~~~~~~ 326 (420)
T 3vl1_A 298 VDGNNANYIYAGYENGMLAQWDLRSPECP 326 (420)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSC
T ss_pred EeCCCCCEEEEEeCCCeEEEEEcCCCcCc
Confidence 56677745555667899999999665543
No 81
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=24.58 E-value=42 Score=25.31 Aligned_cols=24 Identities=13% Similarity=0.174 Sum_probs=20.6
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
++.+...||+..+..++|++||..
T Consensus 203 ~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 203 LVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EETTTTEEEEEETTTTEEEEEETT
T ss_pred EECCCCEEEEEECCCCEEEEEECC
Confidence 445568999999999999999984
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=23.53 E-value=99 Score=23.45 Aligned_cols=25 Identities=12% Similarity=0.030 Sum_probs=17.9
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRD 102 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsD 102 (136)
.+++.+.+++.+-..+.|++||+..
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGT 163 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTT
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCC
Confidence 5666555566666789999999843
No 83
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=23.06 E-value=1e+02 Score=23.47 Aligned_cols=23 Identities=13% Similarity=0.001 Sum_probs=15.0
Q ss_pred CCCCCCeEEEccCCCCcEEEEeC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDI 100 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dv 100 (136)
.++.+..+++.+=..+.|++||+
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEEC
T ss_pred EeCCCCCEEEEEcCCCeEEEEEC
Confidence 56533334444446889999999
No 84
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=22.74 E-value=61 Score=24.57 Aligned_cols=19 Identities=21% Similarity=0.272 Sum_probs=13.7
Q ss_pred eEEEEeeCCCCCccccccc
Q psy10678 46 YLAVIDVDPQSKTYQQVRN 64 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~ 64 (136)
+-.+||..+.|+||++..+
T Consensus 84 ~dV~vD~R~~SpTfg~~~~ 102 (184)
T 2ixk_A 84 FDVAVDLRRGSPTFGQWVG 102 (184)
T ss_dssp EEEEEECBTTSTTTTCEEE
T ss_pred EEEEEECCCCCCCCCeEEE
Confidence 3456788888888888644
No 85
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=22.53 E-value=55 Score=24.87 Aligned_cols=24 Identities=13% Similarity=0.037 Sum_probs=20.8
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+++.++||+.+-..++|++||+.
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBC
T ss_pred EcCCCCEEEEEECCCCEEEEEEcc
Confidence 567888999998888999999973
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=22.24 E-value=1.8e+02 Score=25.06 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=23.9
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCCCCCCeEeEEEeecc
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 116 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsDP~~PkL~~~v~~gg 116 (136)
.+++.++|+..+. .|.|++||+....+....+.+..+|
T Consensus 262 ~spdg~~l~s~s~-Dg~I~vwd~~~~~~~~~~~~~~~~~ 299 (753)
T 3jro_A 262 WSLSGNVLALSGG-DNKVTLWKENLEGKWEPAGEVHQGG 299 (753)
T ss_dssp ECTTTCCEEEECS-SSCEECCBCCSSSCCBCCCCBC---
T ss_pred EcCCCCEEEEEcC-CCEEEEEecCCCCCccccccccccc
Confidence 5677888777664 8899999996444444444444433
No 87
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=21.83 E-value=1.4e+02 Score=22.96 Aligned_cols=53 Identities=21% Similarity=0.184 Sum_probs=29.5
Q ss_pred eEEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEcc--------CCCCcEEEEeCCCCCCCeE
Q psy10678 46 YLAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSN--------WMHGDIRQYDIRDTAHPVL 108 (136)
Q Consensus 46 yl~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~--------l~sgrIyv~DvsDP~~PkL 108 (136)
+-.+||..+.|+||++..+-. |-..+.+.||+|- |-.+-+..|=+++.-+|.-
T Consensus 83 ~dV~VDlR~~SpTfG~~~~v~----------Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s~~Y~p~~ 143 (205)
T 1oi6_A 83 MDIVIDIRVGSPTFGQWDSVL----------MDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQD 143 (205)
T ss_dssp EEEEECCCBTCTTTTCEEEEE----------ECSSSCCEEEECTTCEEEEEECSTTEEEEEEESSCCCGGG
T ss_pred EEEEEECCCCCCCCCeEEEEE----------ecCCCCCEEEeCCCeeEEEEEccCCeEEEEecCCccCHhH
Confidence 445688888888888754322 0112456666662 2233455554566666654
No 88
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=21.63 E-value=41 Score=24.75 Aligned_cols=24 Identities=13% Similarity=0.356 Sum_probs=20.6
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+++.++||+.+...++|++||+.
T Consensus 189 ~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 189 LSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCeEEEEEec
Confidence 467778999998888999999983
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=20.83 E-value=1.9e+02 Score=20.97 Aligned_cols=24 Identities=8% Similarity=-0.011 Sum_probs=18.1
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIRD 102 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~DvsD 102 (136)
.+++.++|+..+ ..+.|++||+..
T Consensus 210 ~~~~~~~l~~~~-~d~~i~i~d~~~ 233 (372)
T 1k8k_C 210 FSANGSRVAWVS-HDSTVCLADADK 233 (372)
T ss_dssp ECSSSSEEEEEE-TTTEEEEEEGGG
T ss_pred ECCCCCEEEEEe-CCCEEEEEECCC
Confidence 566777777665 678999999943
No 90
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=20.64 E-value=60 Score=24.07 Aligned_cols=24 Identities=29% Similarity=0.387 Sum_probs=20.3
Q ss_pred CCCCCCeEEEccCCC-----CcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMH-----GDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~s-----grIyv~Dvs 101 (136)
++++.++||+..... ++|++||+.
T Consensus 195 ~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 195 FSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp ECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred EcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 678889999998774 899999984
No 91
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=20.47 E-value=39 Score=23.87 Aligned_cols=23 Identities=9% Similarity=0.167 Sum_probs=16.9
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+.+. .||+.++.+++|++|+..
T Consensus 241 ~~~~g-~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 241 VDSDR-TVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp ECTTC-CEEEEEGGGTEEEEECCC
T ss_pred ECCCC-CEEEEECCCCEEEEEcCC
Confidence 34444 488888888888888873
No 92
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=20.44 E-value=1.5e+02 Score=22.83 Aligned_cols=24 Identities=13% Similarity=-0.065 Sum_probs=18.2
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+++.++|++.+=..+.|++|++.
T Consensus 307 ~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 307 WSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC
T ss_pred EeCCCCeEEEEEcCCCeEEEEECC
Confidence 567777777776667888888883
No 93
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=20.18 E-value=1.3e+02 Score=22.89 Aligned_cols=24 Identities=13% Similarity=-0.014 Sum_probs=17.7
Q ss_pred CCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 78 ISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 78 ~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+++.+.+++.+=..+.|++||+.
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTT
T ss_pred EcCCCCCEEEEEeCCCEEEEEECC
Confidence 566665556666678899999984
No 94
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=20.13 E-value=61 Score=26.41 Aligned_cols=25 Identities=20% Similarity=0.135 Sum_probs=21.6
Q ss_pred ccCCCCCCeEEEccCCCCcEEEEeC
Q psy10678 76 ILISLDDRYLYTSNWMHGDIRQYDI 100 (136)
Q Consensus 76 ~l~s~drr~L~vp~l~sgrIyv~Dv 100 (136)
+.++++.++||+....+++|++||.
T Consensus 275 ia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCEEEEEeC
Confidence 3356788999999999999999986
No 95
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=20.13 E-value=1.3e+02 Score=23.09 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=31.7
Q ss_pred EEEEeeCCCCCcccccccccccCCCccccccCCCCCCeEEEcc--------CCCCcEEEEeCCCCCCCeEeEEEe
Q psy10678 47 LAVIDVDPQSKTYQQVRNTLRAGLAMVTDILISLDDRYLYTSN--------WMHGDIRQYDIRDTAHPVLVGQIF 113 (136)
Q Consensus 47 l~VIdv~p~s~~y~ev~~~~~a~~~~~gD~l~s~drr~L~vp~--------l~sgrIyv~DvsDP~~PkL~~~v~ 113 (136)
-.+||..+.|+||++...-.. + ..+.+-||+|- |-.+-+.+|=++++-+|.--..|.
T Consensus 102 dV~VDlR~~SpTfG~~~~v~L------s----~en~~~L~IP~G~aHgf~~lsd~a~~ly~~s~~Y~p~~e~~i~ 166 (196)
T 1wlt_A 102 DVAVDVRKSSPTFGKYVKAEL------N----EENHYMLWIPPGFAHGFQALEDSIVIYFITHNEYSPPHERCIS 166 (196)
T ss_dssp EEEEECBTTSTTTTCEEEEEE------E----TTTCCEEEECTTEEEEEEESSSEEEEEEEESSCCCGGGEEECC
T ss_pred EEEEECCCCCCCCCeEEEEEe------c----CCCCCEEEeCCCeEEEEEEcCCCeEEEEEeCCcCChhHCCccc
Confidence 456788888888888644220 1 12455666652 333345566556666665544443
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=20.10 E-value=1.1e+02 Score=23.89 Aligned_cols=27 Identities=11% Similarity=0.236 Sum_probs=22.4
Q ss_pred cccCCCCCCeEEEccCCCCcEEEEeCC
Q psy10678 75 DILISLDDRYLYTSNWMHGDIRQYDIR 101 (136)
Q Consensus 75 D~l~s~drr~L~vp~l~sgrIyv~Dvs 101 (136)
.+-.+++.++|++.+-..+.|++||+.
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~ 133 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVD 133 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECc
Confidence 333678999998888889999999995
Done!