BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10679
(62 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6PHD9|SBP1_DANRE Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1
Length = 457
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 48/56 (85%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I GS +++I+VNT+ GGL L+E+F+VD G EP GPALAHE+RYPGGDCTSDIWL
Sbjct: 402 LIKEGSVMMQIDVNTDTGGLKLNENFLVDFGAEPEGPALAHELRYPGGDCTSDIWL 457
>sp|Q93WN0|SEBP2_ARATH Selenium-binding protein 2 OS=Arabidopsis thaliana GN=SBP2 PE=2
SV=1
Length = 487
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 47/52 (90%)
Query: 5 GSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
GS +++I+V+T++GGLTL+ DF VD G EP+GPALAHE+RYPGGDCTSDIW+
Sbjct: 436 GSHIIQIDVDTDKGGLTLNPDFFVDFGDEPDGPALAHEMRYPGGDCTSDIWI 487
>sp|O23264|SEBP1_ARATH Selenium-binding protein 1 OS=Arabidopsis thaliana GN=SBP1 PE=1
SV=1
Length = 490
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 47/53 (88%)
Query: 4 SGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
GS +++I+V+TE+GGLT++ DF VD G EP+GP+LAHE+RYPGGDCTSDIW+
Sbjct: 438 KGSHIIQIDVDTEKGGLTINPDFFVDFGDEPDGPSLAHEMRYPGGDCTSDIWI 490
>sp|Q569D5|SBP1_XENTR Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2
SV=1
Length = 472
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
MI GS +++I+V+TE+GGL L+ +F+VD G EP GP LAHE+RYPGGDC+SDIW+
Sbjct: 417 MIKEGSVMLQIDVDTEKGGLKLNPNFLVDFGKEPGGPVLAHELRYPGGDCSSDIWV 472
>sp|Q6DCH7|SBP1B_XENLA Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-b PE=2
SV=1
Length = 472
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
M+ G+ +++I+V+TE+GGL L+ +F+VD G EP+GP LAHE+RYPGGDC+SDIW+
Sbjct: 417 MLKEGAVMLQIDVDTEKGGLKLNPNFLVDFGKEPDGPVLAHELRYPGGDCSSDIWI 472
>sp|Q9LK38|SEBP3_ARATH Selenium-binding protein 3 OS=Arabidopsis thaliana GN=SBP3 PE=2
SV=1
Length = 480
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 49/56 (87%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
++ GS +++I+V+T++GGL+++ +F VD G EP+GP+LAHE+RYPGGDCTSDIW+
Sbjct: 425 LVEKGSHMLQIDVDTDKGGLSINPNFFVDFGTEPDGPSLAHEMRYPGGDCTSDIWV 480
>sp|Q52KZ7|SBP1A_XENLA Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-a PE=2
SV=1
Length = 472
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 48/56 (85%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
++ G+ +++I+V+T++GGL L+ +F+VD G EP+GP LAHEIRYPGGDCTSDIW+
Sbjct: 417 LLKEGAVMLQIDVDTKKGGLKLNPNFLVDFGKEPDGPVLAHEIRYPGGDCTSDIWI 472
>sp|Q2KJ32|SBP1_BOVIN Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1
Length = 472
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I GS +++I+V+T +GGL L+ +F+VD G EP GPALAHE+RYPGGDC+SDIWL
Sbjct: 417 LIREGSVMLQIDVDTVRGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWL 472
>sp|Q8VIF7|SBP1_RAT Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1
SV=1
Length = 472
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I GS +++I+V+T GGL L+ +F+VD G EP GPALAHE+RYPGGDC+SDIW+
Sbjct: 417 LIREGSVMLQIDVDTANGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q5RF48|SBP1_PONAB Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1
Length = 472
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I GS +++++V+T +GGL L+ +F+VD G EP GPALAHE+RYPGGDC+SDIW+
Sbjct: 417 LIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q13228|SBP1_HUMAN Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2
Length = 472
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I GS +++++V+T +GGL L+ +F+VD G EP GPALAHE+RYPGGDC+SDIW+
Sbjct: 417 LIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|P17563|SBP1_MOUSE Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2
Length = 472
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I GS +++I+V+T GGL L+ +F+VD G EP GPALAHE+RYPGGDC+SDIW+
Sbjct: 417 LIREGSMMLQIDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q63836|SBP2_MOUSE Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2
Length = 472
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I GS +++++V+T GGL L+ +F+VD G EP GPALAHE+RYPGGDC+SDIW+
Sbjct: 417 LIREGSVMLQVDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q21950|SBP_CAEEL Putative selenium-binding protein OS=Caenorhabditis elegans
GN=R11G10.2 PE=3 SV=2
Length = 542
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I G ++++++ ++ + L+E F++D+ +PNGP + +I++ GDCTSD +L
Sbjct: 489 LISDGGQMIRVDIVDDE--MQLNEKFLIDMKGQPNGPFVIRDIKFLDGDCTSDSFL 542
>sp|A8X2U9|SBP_CAEBR Putative selenium-binding protein OS=Caenorhabditis briggsae
GN=CBG06685 PE=3 SV=2
Length = 514
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 1 MILSGSALVKINVNTEQGGLTLDEDFIVDLGLEPNGPALAHEIRYPGGDCTSDIWL 56
+I G +V++++ + + L++ F+VD+ +PNGP + +I++ GDCTSD +L
Sbjct: 461 LISDGGQMVRVDIVDNE--MRLNKKFLVDMKDQPNGPFVIRDIKFLDGDCTSDSFL 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,084,831
Number of Sequences: 539616
Number of extensions: 1022684
Number of successful extensions: 1163
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1144
Number of HSP's gapped (non-prelim): 19
length of query: 62
length of database: 191,569,459
effective HSP length: 34
effective length of query: 28
effective length of database: 173,222,515
effective search space: 4850230420
effective search space used: 4850230420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)