BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10681
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68Y62|CPT1A_HORSE Carnitine O-palmitoyltransferase 1, liver isoform OS=Equus caballus
GN=CPT1A PE=2 SV=1
Length = 776
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 19/85 (22%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ + K+RL K A+ HQ Y+ AM G G
Sbjct: 593 MTRLFREGRTETVRSCSSESCNFVLAMVDPTQTVKQKLRLFKIASEKHQHLYRLAMTGSG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFLKIV 66
IDRHLFCLYVVSKYL VDSPFLK V
Sbjct: 653 IDRHLFCLYVVSKYLAVDSPFLKEV 677
>sp|P32198|CPT1A_RAT Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus
norvegicus GN=Cpt1a PE=1 SV=2
Length = 773
Score = 75.9 bits (185), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 48/85 (56%), Gaps = 19/85 (22%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ E +++L K A HQ Y+ AM G G
Sbjct: 593 MTRLFREGRTETVRSCTMESCNFVQAMMDPKSTAEQRLKLFKIACEKHQHLYRLAMTGAG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFLKIV 66
IDRHLFCLYVVSKYL VDSPFLK V
Sbjct: 653 IDRHLFCLYVVSKYLAVDSPFLKEV 677
>sp|P97742|CPT1A_MOUSE Carnitine O-palmitoyltransferase 1, liver isoform OS=Mus musculus
GN=Cpt1a PE=1 SV=4
Length = 773
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 47/85 (55%), Gaps = 19/85 (22%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ E + +L K A HQ Y+ AM G G
Sbjct: 593 MTRLFREGRTETVRSCTTESCNFVLAMMDPTTTAEQRFKLFKIACEKHQHLYRLAMTGAG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFLKIV 66
IDRHLFCLYVVSKYL VDSPFLK V
Sbjct: 653 IDRHLFCLYVVSKYLAVDSPFLKEV 677
>sp|P50416|CPT1A_HUMAN Carnitine O-palmitoyltransferase 1, liver isoform OS=Homo sapiens
GN=CPT1A PE=1 SV=2
Length = 773
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 19/85 (22%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ E +++L K A+ HQ Y+ AM G G
Sbjct: 593 MTRLFREGRTETVRSCTTESCDFVRAMVDPAQTVEQRLKLFKLASEKHQHMYRLAMTGSG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFLKIV 66
IDRHLFCLYVVSKYL V+SPFLK V
Sbjct: 653 IDRHLFCLYVVSKYLAVESPFLKEV 677
>sp|Q58DK1|CPT1B_BOVIN Carnitine O-palmitoyltransferase 1, muscle isoform OS=Bos taurus
GN=CPT1B PE=2 SV=1
Length = 771
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 46/82 (56%), Gaps = 19/82 (23%)
Query: 1 MARNYKYARTRTVR-------------------NEDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR NED RL + AA HQ Y+ AM G G
Sbjct: 592 MTRMFREGRTETVRSCTRESTAFVQAMVQGRHLNEDLQRLFRKAAEKHQNMYRLAMTGAG 651
Query: 42 IDRHLFCLYVVSKYLEVDSPFL 63
IDRHLFCLYVVSKYL V+SPFL
Sbjct: 652 IDRHLFCLYVVSKYLGVESPFL 673
>sp|Q8HY46|CPT1B_PIG Carnitine O-palmitoyltransferase 1, muscle isoform OS=Sus scrofa
GN=CPT1B PE=2 SV=1
Length = 772
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 43/82 (52%), Gaps = 19/82 (23%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ D L + AA HQ Y+ AM G G
Sbjct: 593 MTRMFREGRTETVRSCTRESTAFVQAMVEGRRVKADLQDLFRKAAQKHQNMYRLAMTGAG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFL 63
IDRHLFCLYVVSKYL V SPFL
Sbjct: 653 IDRHLFCLYVVSKYLGVSSPFL 674
>sp|Q924X2|CPT1B_MOUSE Carnitine O-palmitoyltransferase 1, muscle isoform OS=Mus musculus
GN=Cpt1b PE=2 SV=1
Length = 772
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 19/82 (23%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ +D L + A+ HQ Y+ AM G G
Sbjct: 593 MTRMFREGRTETVRSCTNESAAFVQAMMKGSHKKQDLQDLFRKASEKHQNMYRLAMTGAG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFL 63
IDRHLFCLY+VSKYL V SPFL
Sbjct: 653 IDRHLFCLYIVSKYLGVSSPFL 674
>sp|Q63704|CPT1B_RAT Carnitine O-palmitoyltransferase 1, muscle isoform OS=Rattus
norvegicus GN=Cpt1b PE=1 SV=1
Length = 772
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 19/82 (23%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ +D L + A+ HQ Y+ AM G G
Sbjct: 593 MTRMFREGRTETVRSCTSESTAFVRAMMTGSHKKQDLQDLFRKASEKHQNMYRLAMTGAG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFL 63
IDRHLFCLY+VSKYL V SPFL
Sbjct: 653 IDRHLFCLYIVSKYLGVRSPFL 674
>sp|Q92523|CPT1B_HUMAN Carnitine O-palmitoyltransferase 1, muscle isoform OS=Homo sapiens
GN=CPT1B PE=2 SV=2
Length = 772
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 43/82 (52%), Gaps = 19/82 (23%)
Query: 1 MARNYKYARTRTVRN-------------------EDKIRLLKAAAGAHQRGYQDAMCGKG 41
M R ++ RT TVR+ D L + AA HQ Y+ AM G G
Sbjct: 593 MTRMFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYRLAMTGAG 652
Query: 42 IDRHLFCLYVVSKYLEVDSPFL 63
IDRHLFCLY+VSKYL V SPFL
Sbjct: 653 IDRHLFCLYLVSKYLGVSSPFL 674
>sp|Q8TCG5|CPT1C_HUMAN Carnitine O-palmitoyltransferase 1, brain isoform OS=Homo sapiens
GN=CPT1C PE=2 SV=1
Length = 803
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 19/86 (22%)
Query: 1 MARNYKYARTRTVRN------------EDK-------IRLLKAAAGAHQRGYQDAMCGKG 41
M R + RT TVR+ EDK + L + A HQ + AM G+G
Sbjct: 590 MTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDPQCLALFRVAVDKHQALLKAAMSGQG 649
Query: 42 IDRHLFCLYVVSKYLEVDSPFLKIVH 67
+DRHLF LY+VS++L + SPFL VH
Sbjct: 650 VDRHLFALYIVSRFLHLQSPFLTQVH 675
>sp|F1LN46|CPT1C_RAT Carnitine O-palmitoyltransferase 1, brain isoform OS=Rattus
norvegicus GN=Cpt1c PE=1 SV=1
Length = 801
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 19/86 (22%)
Query: 1 MARNYKYARTRTVRN------------EDKIR-------LLKAAAGAHQRGYQDAMCGKG 41
M R + RT TVR+ E+K R L + A HQ + AM G+G
Sbjct: 589 MTRLFLEGRTETVRSCTREACQFVRAMENKERTDQQCLALFREAVDKHQALLKAAMSGQG 648
Query: 42 IDRHLFCLYVVSKYLEVDSPFLKIVH 67
IDRHLF LY++S+ L + SPFL V
Sbjct: 649 IDRHLFALYIMSRLLHMQSPFLTQVQ 674
>sp|Q8BGD5|CPT1C_MOUSE Carnitine O-palmitoyltransferase 1, brain isoform OS=Mus musculus
GN=Cpt1c PE=1 SV=1
Length = 798
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 18/85 (21%)
Query: 1 MARNYKYARTRTVR------------------NEDKIRLLKAAAGAHQRGYQDAMCGKGI 42
M R + RT TVR ++ + L + A HQ + AM G+GI
Sbjct: 589 MTRLFLEGRTETVRSCTREACQFVRAMDNKETDQHCLALFRVAVDKHQALLKAAMSGQGI 648
Query: 43 DRHLFCLYVVSKYLEVDSPFLKIVH 67
DRHLF LY++S+ L + SPFL V
Sbjct: 649 DRHLFALYIMSRLLHMQSPFLTQVQ 673
>sp|Q9UKG9|OCTC_HUMAN Peroxisomal carnitine O-octanoyltransferase OS=Homo sapiens GN=CROT
PE=1 SV=2
Length = 612
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 21/74 (28%)
Query: 1 MARNYKYARTRTVRN--------------------EDKIRLLKAAAGAHQRGYQDAMCGK 40
M R++ + RT T+R+ E + ++L+A A H + +D GK
Sbjct: 443 MTRHFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFA-KHNKMMKDCSAGK 501
Query: 41 GIDRHLFCLYVVSK 54
G DRHL L +++K
Sbjct: 502 GFDRHLLGLLLIAK 515
>sp|Q9DC50|OCTC_MOUSE Peroxisomal carnitine O-octanoyltransferase OS=Mus musculus GN=Crot
PE=1 SV=1
Length = 612
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 21/74 (28%)
Query: 1 MARNYKYARTRTVRN--------------------EDKIRLLKAAAGAHQRGYQDAMCGK 40
M R + + RT TVR+ E + ++L+A A H + +D GK
Sbjct: 443 MTRYFYHGRTETVRSCTVEAVRWCQSMQDPSASLLERQQKMLEAFA-KHNKMMKDCSHGK 501
Query: 41 GIDRHLFCLYVVSK 54
G DRHL L +++K
Sbjct: 502 GFDRHLLGLLLIAK 515
>sp|Q00614|CACP_CANTR Carnitine O-acetyltransferase, mitochondrial OS=Candida tropicalis
GN=CAT2 PE=3 SV=1
Length = 627
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 19/66 (28%)
Query: 3 RNYKYART---RTVRNE----------------DKIRLLKAAAGAHQRGYQDAMCGKGID 43
R + RT RTV NE DK+ +AAA H A GKG+D
Sbjct: 457 RKFLKGRTETGRTVSNESKKFVETWSDPNASSADKVATFQAAAKQHVAYLSAAADGKGVD 516
Query: 44 RHLFCL 49
RHLF L
Sbjct: 517 RHLFGL 522
>sp|P11466|OCTC_RAT Peroxisomal carnitine O-octanoyltransferase OS=Rattus norvegicus
GN=Crot PE=1 SV=3
Length = 612
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 21/74 (28%)
Query: 1 MARNYKYARTRTVRN--------------------EDKIRLLKAAAGAHQRGYQDAMCGK 40
M R + + RT TVR+ E + ++L A A H + +D GK
Sbjct: 443 MTRYFYHGRTETVRSCTVEAVRWCQSMQDPSASLLERQQKMLDAFA-KHNKMMRDCSHGK 501
Query: 41 GIDRHLFCLYVVSK 54
G DRHL L +++K
Sbjct: 502 GFDRHLLGLLLIAK 515
>sp|P43155|CACP_HUMAN Carnitine O-acetyltransferase OS=Homo sapiens GN=CRAT PE=1 SV=5
Length = 626
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 12 TVRNEDKIRLLKAAAGAHQRGYQD-AMCGKGIDRHLFCL 49
+V K+ LL+ A AH RGY D A+ G+ DRHL L
Sbjct: 486 SVTEHQKVELLRKAVQAH-RGYTDRAIRGEAFDRHLLGL 523
>sp|O19094|OCTC_BOVIN Peroxisomal carnitine O-octanoyltransferase OS=Bos taurus GN=CROT
PE=1 SV=1
Length = 612
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 21/74 (28%)
Query: 1 MARNYKYARTRTVRN--------------------EDKIRLLKAAAGAHQRGYQDAMCGK 40
M R + + RT TVR E K +L+A A H + +D GK
Sbjct: 443 MTRLFYHGRTETVRPCTVEAVNWCQSMQNPSTSLLERKHMMLEAFA-KHNKMMKDCSTGK 501
Query: 41 GIDRHLFCLYVVSK 54
G DRHL L +++K
Sbjct: 502 GFDRHLLGLSLIAK 515
>sp|P47934|CACP_MOUSE Carnitine O-acetyltransferase OS=Mus musculus GN=Crat PE=1 SV=3
Length = 626
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 12 TVRNEDKIRLLKAAAGAHQRGYQD-AMCGKGIDRHLFCL 49
TV + K+ LL+ A AH R Y D A+ G+ DRHL L
Sbjct: 486 TVPEQQKVELLRKAVQAH-RAYTDRAIRGEAFDRHLLGL 523
>sp|P32796|CACP_YEAST Carnitine O-acetyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CAT2 PE=1
SV=2
Length = 670
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 17 DKIRLLKAAAGAHQRGYQDAMCGKGIDRHLFCL 49
+KI+ LK +A H ++A G G+DRH F L
Sbjct: 533 EKIQALKHSAKEHSTYLKNAANGNGVDRHFFGL 565
>sp|P80235|CACM_YEAST Putative mitochondrial carnitine O-acetyltransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YAT1 PE=1 SV=2
Length = 687
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 18 KIRLLKAAAGAHQRGYQDAMCGKGIDRHLFCLY 50
KI+LL A AH + ++ G G DRHL+ LY
Sbjct: 521 KIQLLHDACTAHSQITRECSQGLGQDRHLYALY 553
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,101,594
Number of Sequences: 539616
Number of extensions: 695149
Number of successful extensions: 1620
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1602
Number of HSP's gapped (non-prelim): 21
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)