Query psy10682
Match_columns 71
No_of_seqs 113 out of 543
Neff 5.6
Searched_HMMs 13730
Date Fri Aug 16 15:57:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10682.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10682hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2g0ta1 c.37.1.10 (A:1-338) Hy 47.3 3.9 0.00029 28.0 1.7 30 20-59 194-223 (338)
2 d1q0qa2 c.2.1.3 (A:1-125,A:275 25.6 6.7 0.00049 23.6 -0.1 10 44-53 142-151 (151)
3 d1jmxg_ a.137.9.1 (G:) Quinohe 24.1 11 0.00082 20.6 0.7 15 12-26 10-25 (77)
4 d2a5yb1 a.4.5.80 (B:386-543) C 22.9 6.7 0.00049 23.7 -0.5 11 46-56 27-37 (158)
5 d1uuza_ d.233.1.1 (A:) Inhibit 15.3 21 0.0015 21.2 0.6 18 9-26 26-43 (130)
6 d1pbyc_ a.137.9.1 (C:) Quinohe 14.7 24 0.0018 19.2 0.7 15 12-26 12-27 (79)
7 d1i24a_ c.2.1.2 (A:) Sulfolipi 12.7 66 0.0048 20.1 2.6 32 31-62 249-280 (393)
8 d1ji6a1 b.18.1.3 (A:503-652) d 11.9 21 0.0015 21.1 -0.2 9 44-52 142-150 (150)
9 d1zhva1 d.58.18.8 (A:2-61) Hyp 10.9 40 0.0029 17.2 0.9 11 8-18 20-30 (60)
10 d2uuyb1 g.8.1.3 (B:24-74) Tryp 10.7 38 0.0028 16.6 0.7 11 7-17 6-16 (51)
No 1
>d2g0ta1 c.37.1.10 (A:1-338) Hypothetical protein TM0796 {Thermotoga maritima [TaxId: 2336]}
Probab=47.27 E-value=3.9 Score=28.03 Aligned_cols=30 Identities=27% Similarity=0.477 Sum_probs=24.3
Q ss_pred CccceeeecceeceEEEEEeCCccccceehhhHhHHHHHH
Q psy10682 20 NGPTGILVAGAKGVIRTMLCNGDYHAEVIPVDMAINGLIV 59 (71)
Q Consensus 20 ~g~~gl~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn~iI~ 59 (71)
.|.||++.+...|+ ..|-||+|+++-++=.
T Consensus 194 TGQTGili~g~~Gv----------~~Dav~~DfvaGavE~ 223 (338)
T d2g0ta1 194 TGQTGILIGADAGY----------VIDAVPADFVSGVVEK 223 (338)
T ss_dssp CSHHHHHTTCSEEC----------CGGGSBGGGHHHHHHH
T ss_pred cCCeeEeeccccce----------ecCcchhhhhHHHHHH
Confidence 47788888877787 8999999999877543
No 2
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=25.60 E-value=6.7 Score=23.58 Aligned_cols=10 Identities=30% Similarity=0.634 Sum_probs=7.8
Q ss_pred ccceehhhHh
Q psy10682 44 HAEVIPVDMA 53 (71)
Q Consensus 44 ~~DiVPVD~v 53 (71)
...++|||+|
T Consensus 142 ~~~IiPVD~~ 151 (151)
T d1q0qa2 142 NSGVKPLDFC 151 (151)
T ss_dssp CCSCCCCCTT
T ss_pred CCcEEcCcCC
Confidence 3479999986
No 3
>d1jmxg_ a.137.9.1 (G:) Quinohemoprotein amine dehydrogenase C chain {Pseudomonas putida [TaxId: 303]}
Probab=24.07 E-value=11 Score=20.57 Aligned_cols=15 Identities=40% Similarity=0.946 Sum_probs=10.9
Q ss_pred cccc-ccCCCccceee
Q psy10682 12 LPGW-VDNLNGPTGIL 26 (71)
Q Consensus 12 ~pGW-idn~~g~~gl~ 26 (71)
-||| +|.+.|..+|+
T Consensus 10 dPGWEvD~fGGva~LC 25 (77)
T d1jmxg_ 10 DPGWEVDAFGGVSSLC 25 (77)
T ss_dssp SSCSSSCTTSSSSSSC
T ss_pred CCCceecCCccHhhcc
Confidence 3788 67777777765
No 4
>d2a5yb1 a.4.5.80 (B:386-543) Cell death protein 4, CED-4 {Caenorhabditis elegans [TaxId: 6239]}
Probab=22.88 E-value=6.7 Score=23.67 Aligned_cols=11 Identities=55% Similarity=0.736 Sum_probs=4.0
Q ss_pred ceehhhHhHHH
Q psy10682 46 EVIPVDMAING 56 (71)
Q Consensus 46 DiVPVD~vvn~ 56 (71)
-+||||+|.|-
T Consensus 27 cvipvdicsne 37 (158)
T d2a5yb1 27 CVIPVDICSNE 37 (158)
T ss_dssp HHSCC------
T ss_pred EeeeeeecCCh
Confidence 46899999884
No 5
>d1uuza_ d.233.1.1 (A:) Inhibitor of vertebrate lysozyme, Ivy {Pseudomonas aeruginosa [TaxId: 287]}
Probab=15.27 E-value=21 Score=21.18 Aligned_cols=18 Identities=28% Similarity=0.733 Sum_probs=13.9
Q ss_pred cCCccccccCCCccceee
Q psy10682 9 REPLPGWVDNLNGPTGIL 26 (71)
Q Consensus 9 ~EP~pGWidn~~g~~gl~ 26 (71)
++++|+|+-+.+|.+.=.
T Consensus 26 ~~~LP~WV~~g~GtssP~ 43 (130)
T d1uuza_ 26 ESDVPKWVSDASGPSSPS 43 (130)
T ss_dssp CCSCCHHHHTTCSCBCCC
T ss_pred cccCcHHHHhCCCCCCCc
Confidence 578999999887766533
No 6
>d1pbyc_ a.137.9.1 (C:) Quinohemoprotein amine dehydrogenase C chain {Paracoccus denitrificans [TaxId: 266]}
Probab=14.66 E-value=24 Score=19.22 Aligned_cols=15 Identities=33% Similarity=0.811 Sum_probs=11.0
Q ss_pred cccc-ccCCCccceee
Q psy10682 12 LPGW-VDNLNGPTGIL 26 (71)
Q Consensus 12 ~pGW-idn~~g~~gl~ 26 (71)
-||| +|.+.|..+|+
T Consensus 12 dPGWEvD~fGGva~LC 27 (79)
T d1pbyc_ 12 DPGWEVDAFGAVSNLC 27 (79)
T ss_dssp SSBSSSBTTSSSTTSC
T ss_pred CCCceecCCccHhhcc
Confidence 4788 67777777765
No 7
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=12.69 E-value=66 Score=20.06 Aligned_cols=32 Identities=9% Similarity=0.025 Sum_probs=25.5
Q ss_pred eceEEEEEeCCccccceehhhHhHHHHHHHHh
Q psy10682 31 KGVIRTMLCNGDYHAEVIPVDMAINGLIVIGY 62 (71)
Q Consensus 31 ~G~lr~~~~~~~~~~DiVPVD~vvn~iI~aa~ 62 (71)
.|---.++++.+..-|++.||-++++++.+.-
T Consensus 249 ~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~ 280 (393)
T d1i24a_ 249 VGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIA 280 (393)
T ss_dssp HTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred cCCeeEEeeecccccccccccchHHHHHHHHH
Confidence 44444567888889999999999999887764
No 8
>d1ji6a1 b.18.1.3 (A:503-652) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]}
Probab=11.91 E-value=21 Score=21.06 Aligned_cols=9 Identities=44% Similarity=0.822 Sum_probs=7.0
Q ss_pred ccceehhhH
Q psy10682 44 HAEVIPVDM 52 (71)
Q Consensus 44 ~~DiVPVD~ 52 (71)
+..+||||+
T Consensus 142 rIEFIPVd~ 150 (150)
T d1ji6a1 142 KIEFIPVQL 150 (150)
T ss_dssp EEEEEECCC
T ss_pred eEEEEcccC
Confidence 567899985
No 9
>d1zhva1 d.58.18.8 (A:2-61) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=10.88 E-value=40 Score=17.18 Aligned_cols=11 Identities=36% Similarity=0.921 Sum_probs=8.7
Q ss_pred ccCCccccccC
Q psy10682 8 WREPLPGWVDN 18 (71)
Q Consensus 8 ~~EP~pGWidn 18 (71)
-..|+|+|+++
T Consensus 20 ~~s~iP~w~~~ 30 (60)
T d1zhva1 20 ASEAIPAWADG 30 (60)
T ss_dssp TTCCCCTTTSS
T ss_pred CCCCCCccccC
Confidence 35699999976
No 10
>d2uuyb1 g.8.1.3 (B:24-74) Tryptase inhibitor {Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]}
Probab=10.73 E-value=38 Score=16.59 Aligned_cols=11 Identities=36% Similarity=1.008 Sum_probs=6.3
Q ss_pred eccCCcccccc
Q psy10682 7 AWREPLPGWVD 17 (71)
Q Consensus 7 t~~EP~pGWid 17 (71)
-|+||+.|-..
T Consensus 6 gwsepvkglck 16 (51)
T d2uuyb1 6 GWSEPVKGLCK 16 (51)
T ss_dssp TCCCCCCCSBC
T ss_pred cccchhhHHHH
Confidence 36677666443
Done!