AmiGO: BLAST Results


BLAST match view associations BLAST with Iswi Iswi Iswi Imitation SWI	protein from Drosophila melanogaster	1.1e-135
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Gallus gallus	2.1e-128
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Gallus gallus	2.1e-128
BLAST match view associations BLAST with Smarca5 Smarca5 Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	protein from Mus musculus	3.0e-127
BLAST match view associations BLAST with smarca5 smarca5 smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	gene_product from Danio rerio	3.8e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Bos taurus	6.3e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Canis lupus familiaris	6.3e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	protein from Homo sapiens	6.3e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Sus scrofa	6.3e-127
BLAST match view associations BLAST with Smarca5 Smarca5 Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	gene from Rattus norvegicus	6.3e-127
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Gallus gallus	1.8e-126
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	5.0e-125
BLAST match view associations BLAST with si:dkey-148b12.1 si:dkey-148b12.1 si:dkey-148b12.1	gene_product from Danio rerio	1.3e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Probable global transcription activator SNF2L1	protein from Homo sapiens	2.1e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Probable global transcription activator SNF2L1	protein from Homo sapiens	2.1e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Bos taurus	7.2e-123
BLAST match view associations BLAST with Smarca1 Smarca1 Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	protein from Mus musculus	7.2e-123
BLAST match view associations BLAST with Smarca1 Smarca1 Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	gene from Rattus norvegicus	2.4e-122
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	8.3e-122
BLAST match view associations BLAST with isw-1 isw-1 isw-1	gene from Caenorhabditis elegans	2.6e-109
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	2.0e-96
BLAST match view associations BLAST with isw isw isw CHR group protein	gene from Dictyostelium discoideum	3.0e-91
BLAST match view associations BLAST with CHR17 CHR17 CHR17 chromatin remodeling factor17	protein from Arabidopsis thaliana	1.2e-87
BLAST match view associations BLAST with ISW2 ISW2 ISW2 ATP-dependent DNA translocase involved in chromatin remodeling	gene from Saccharomyces cerevisiae	3.3e-86
BLAST match view associations BLAST with MGG_01012 MGG_01012 MGG_01012 ISWI chromatin-remodeling complex ATPase ISW2	protein from Magnaporthe oryzae 70-15	4.3e-86
BLAST match view associations BLAST with ISW1 ISW1 ISW1 ATPase subunit of imitation-switch (ISWI) class chromatin remodelers	gene from Saccharomyces cerevisiae	7.2e-86
BLAST match view associations BLAST with ISW2 ISW2 ISW2	gene_product from Candida albicans	2.6e-79
BLAST match view associations BLAST with ISW2 ISW2 ISW2 ISWI chromatin-remodeling complex ATPase ISW2	protein from Candida albicans SC5314	2.6e-79
BLAST match view associations BLAST with PF11_0053 PF11_0053 PF11_0053 PfSNF2L	gene from Plasmodium falciparum	1.4e-66
BLAST match view associations BLAST with PF11_0053 PF11_0053 PF11_0053 PfSNF2L	protein from Plasmodium falciparum 3D7	1.4e-66
BLAST match view associations BLAST with SNF2 SNF2 SNF2 Catalytic subunit of the SWI/SNF chromatin remodeling complex	gene from Saccharomyces cerevisiae	1.7e-61
BLAST match view associations BLAST with orf19.1720 orf19.1720 orf19.1720	gene_product from Candida albicans	1.6e-60
BLAST match view associations BLAST with CaO19.1720 CaO19.1720 CaO19.1720 Putative uncharacterized protein	protein from Candida albicans SC5314	1.6e-60
BLAST match view associations BLAST with STH1 STH1 STH1 ATPase component of the RSC chromatin remodeling complex	gene from Saccharomyces cerevisiae	3.2e-60
BLAST match view associations BLAST with LOC100359912 LOC100359912 LOC100359912 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like	gene from Rattus norvegicus	5.0e-60
BLAST match view associations BLAST with snf2b snf2b snf2b SNF2-related protein Snf2a	gene from Dictyostelium discoideum	7.9e-60
BLAST match view associations BLAST with Srcap Srcap Srcap Snf2-related CREBBP activator protein	protein from Mus musculus	3.2e-59
BLAST match view associations BLAST with orf19.239 orf19.239 orf19.239	gene_product from Candida albicans	3.2e-59
BLAST match view associations BLAST with Smarca2 Smarca2 Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein from Mus musculus	1.0e-58
BLAST match view associations BLAST with smarca2 smarca2 smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	gene_product from Danio rerio	1.0e-58
BLAST match view associations BLAST with PFB0730w PFB0730w PFB0730w DNA helicase, putative	gene from Plasmodium falciparum	1.4e-58
BLAST match view associations BLAST with PFB0730w PFB0730w PFB0730w DEAD/DEAH box helicase, putative	protein from Plasmodium falciparum 3D7	1.4e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 SMARCA2 protein	protein from Bos taurus	1.5e-58
BLAST match view associations BLAST with F1SJG5 F1SJG5 F1SJG5 Uncharacterized protein	protein from Sus scrofa	1.5e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 Probable global transcription activator SNF2L2	protein from Homo sapiens	1.7e-58
BLAST match view associations BLAST with CHR23 CHR23 CHR23 AT5G19310	protein from Arabidopsis thaliana	2.0e-58
BLAST match view associations BLAST with E1C2F7 E1C2F7 E1C2F7 Uncharacterized protein	protein from Gallus gallus	2.9e-58
BLAST match view associations BLAST with ssl-1 ssl-1 ssl-1	gene from Caenorhabditis elegans	3.0e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 Uncharacterized protein	protein from Canis lupus familiaris	3.3e-58
BLAST match view associations BLAST with hells hells hells helicase, lymphoid-specific	gene_product from Danio rerio	3.8e-58
BLAST match view associations BLAST with CHR1 CHR1 CHR1 AT5G66750	protein from Arabidopsis thaliana	6.6e-58
BLAST match view associations BLAST with LOC100622433 LOC100622433 LOC100622433 Uncharacterized protein	protein from Sus scrofa	6.8e-58
BLAST match view associations BLAST with smarca4 smarca4 smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	gene_product from Danio rerio	1.4e-57
BLAST match view associations BLAST with LOC100622433 LOC100622433 LOC100622433 Uncharacterized protein	protein from Sus scrofa	2.1e-57
BLAST match view associations BLAST with brm brm brm brahma	protein from Drosophila melanogaster	2.2e-57
BLAST match view associations BLAST with SNF2 SNF2 SNF2	gene_product from Candida albicans	3.1e-57
BLAST match view associations BLAST with SNF2 SNF2 SNF2 Putative uncharacterized protein SNF2	protein from Candida albicans SC5314	3.1e-57
BLAST match view associations BLAST with swsn-4 swsn-4 swsn-4	gene from Caenorhabditis elegans	8.0e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Transcription activator BRG1	protein from Bos taurus	9.6e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Transcription activator BRG1	protein from Bos taurus	9.6e-57
BLAST match view associations BLAST with Smarca4 Smarca4 Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	protein from Mus musculus	9.7e-57
BLAST match view associations BLAST with Smarca4 Smarca4 Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	gene from Rattus norvegicus	9.7e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Uncharacterized protein	protein from Canis lupus familiaris	9.7e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Transcription activator BRG1	protein from Homo sapiens	1.0e-56
BLAST match view associations BLAST with C52B9.8 C52B9.8 C52B9.8	gene from Caenorhabditis elegans	1.0e-56
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_c	protein from Homo sapiens	1.0e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Sus scrofa	1.6e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	1.7e-56
BLAST match view associations BLAST with HELLS HELLS HELLS Lymphoid-specific helicase	protein from Homo sapiens	1.7e-56
BLAST match view associations BLAST with LOC788113 LOC788113 LOC788113 Uncharacterized protein	protein from Bos taurus	2.5e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	3.0e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	3.0e-56
BLAST match view associations BLAST with snf2a snf2a snf2a SNF2-related protein SNF2a	gene from Dictyostelium discoideum	5.4e-56
BLAST match view associations BLAST with PIE1 PIE1 PIE1 AT3G12810	protein from Arabidopsis thaliana	6.5e-56
BLAST match view associations BLAST with SWR1 SWR1 SWR1 Swi2/Snf2-related ATPase that is the structural component of the SWR1	gene from Saccharomyces cerevisiae	6.8e-56
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 ATP-dependent helicase, putative	gene from Plasmodium falciparum	1.1e-55
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 Probable ATP-dependent helicase PF08_0048	protein from Plasmodium falciparum 3D7	1.1e-55
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Sus scrofa	1.2e-55
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Bos taurus	1.2e-55
BLAST match view associations BLAST with dom dom dom domino	protein from Drosophila melanogaster	1.3e-55
BLAST match view associations BLAST with orf19.1871 orf19.1871 orf19.1871	gene_product from Candida albicans	1.3e-55
BLAST match view associations BLAST with Smarca2 Smarca2 Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	gene from Rattus norvegicus	1.3e-55
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Canis lupus familiaris	2.0e-55
BLAST match view associations BLAST with IRC5 IRC5 IRC5 Putative ATPase containing the DEAD/H helicase-related sequence motif	gene from Saccharomyces cerevisiae	2.6e-55
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy10683
        (429 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227...  1261  1.1e-135  2
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei...  1207  2.1e-128  2
UNIPROTKB|F1P0A4 - symbol:SMARCA5 "Uncharacterized protei...  1207  2.1e-128  2
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix...  1196  3.0e-127  2
ZFIN|ZDB-GENE-021125-1 - symbol:smarca5 "SWI/SNF related,...  1194  3.8e-127  2
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei...  1193  6.3e-127  2
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei...  1193  6.3e-127  2
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix...  1193  6.3e-127  2
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei...  1193  6.3e-127  2
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass...  1193  6.3e-127  2
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei...  1242  1.8e-126  1
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei...  1181  5.0e-125  2
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk...  1215  1.3e-123  1
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc...  1213  2.1e-123  1
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc...  1213  2.1e-123  1
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei...  1212  2.7e-123  1
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei...  1212  2.7e-123  1
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei...  1212  2.7e-123  1
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei...  1212  2.7e-123  1
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei...  1212  2.7e-123  1
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei...  1208  7.2e-123  1
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix...  1208  7.2e-123  1
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass...  1203  2.4e-122  1
UNIPROTKB|F6XTU7 - symbol:SMARCA1 "Uncharacterized protei...  1198  8.3e-122  1
WB|WBGene00002169 - symbol:isw-1 species:6239 "Caenorhabd...  1080  2.6e-109  1
UNIPROTKB|J9NZH0 - symbol:SMARCA1 "Uncharacterized protei...   919  2.0e-96   2
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s...   890  3.0e-91   2
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f...   837  1.2e-87   2
SGD|S000005831 - symbol:ISW2 "ATP-dependent DNA transloca...   862  3.3e-86   1
UNIPROTKB|G4NCV5 - symbol:MGG_01012 "ISWI chromatin-remod...   861  4.3e-86   1
SGD|S000000449 - symbol:ISW1 "ATPase subunit of imitation...   834  7.2e-86   2
CGD|CAL0005422 - symbol:ISW2 species:5476 "Candida albica...   797  2.6e-79   1
UNIPROTKB|Q5A310 - symbol:ISW2 "Putative uncharacterized ...   797  2.6e-79   1
GENEDB_PFALCIPARUM|PF11_0053 - symbol:PF11_0053 "PfSNF2L"...   688  1.4e-66   1
UNIPROTKB|Q8IIW0 - symbol:PF11_0053 "PfSNF2L" species:363...   688  1.4e-66   1
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW...   642  1.7e-61   1
CGD|CAL0000801 - symbol:orf19.1720 species:5476 "Candida ...   524  1.6e-60   2
UNIPROTKB|Q5AJ72 - symbol:CaO19.1720 "Putative uncharacte...   524  1.6e-60   2
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC...   628  3.2e-60   1
RGD|2323132 - symbol:LOC100359912 "SWI/SNF-related matrix...   615  5.0e-60   1
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote...   621  7.9e-60   2
MGI|MGI:2444036 - symbol:Srcap "Snf2-related CREBBP activ...   586  3.2e-59   2
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a...   608  3.2e-59   2
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci...   588  7.5e-59   3
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a...   588  1.0e-58   3
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat...   595  1.0e-58   2
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci...   588  1.1e-58   3
GENEDB_PFALCIPARUM|PFB0730w - symbol:PFB0730w "DNA helica...   616  1.4e-58   1
UNIPROTKB|O96239 - symbol:PFB0730w "DEAD/DEAH box helicas...   616  1.4e-58   1
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci...   588  1.5e-58   3
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei...   588  1.5e-58   3
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc...   588  1.7e-58   3
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2...   608  2.0e-58   1
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein...   589  2.9e-58   3
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd...   614  3.0e-58   1
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei...   588  3.1e-58   3
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei...   588  3.3e-58   3
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph...   583  3.8e-58   2
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"...   595  6.6e-58   1
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p...   597  6.8e-58   1
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer...   504  7.3e-58   3
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,...   605  1.4e-57   1
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p...   597  2.1e-57   1
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop...   597  2.2e-57   2
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica...   602  3.1e-57   1
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ...   602  3.1e-57   1
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato...   597  5.5e-57   1
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab...   597  8.0e-57   1
UNIPROTKB|F1MJ46 - symbol:SMARCA4 "Transcription activato...   597  9.6e-57   1
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato...   597  9.6e-57   1
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a...   597  9.7e-57   1
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso...   597  9.7e-57   1
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei...   597  9.7e-57   1
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri...   597  9.7e-57   1
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato...   597  9.8e-57   1
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato...   597  1.0e-56   1
WB|WBGene00016868 - symbol:C52B9.8 species:6239 "Caenorha...   595  1.0e-56   1
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe...   597  1.0e-56   1
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"...   586  1.6e-56   3
UNIPROTKB|J9PA15 - symbol:SRCAP "Uncharacterized protein"...   586  1.7e-56   2
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica...   583  1.7e-56   1
UNIPROTKB|G3N326 - symbol:LOC788113 "Uncharacterized prot...   586  2.5e-56   1
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he...   582  2.9e-56   2
UNIPROTKB|F6XHF3 - symbol:SRCAP "Uncharacterized protein"...   586  3.0e-56   2
UNIPROTKB|E2R6G6 - symbol:SRCAP "Uncharacterized protein"...   586  3.0e-56   2
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer...   589  5.2e-56   1
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote...   590  5.4e-56   1
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT...   591  6.5e-56   1
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st...   489  6.8e-56   3
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer...   579  8.1e-56   1
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe...   589  1.1e-55   1
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende...   589  1.1e-55   1
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"...   576  1.2e-55   1
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"...   574  1.2e-55   1
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop...   584  1.3e-55   2
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ...   491  1.3e-55   3
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass...   577  1.3e-55   2
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel...   582  1.9e-55   1
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"...   574  2.0e-55   1
SGD|S000001934 - symbol:IRC5 "Putative ATPase containing ...   508  2.6e-55   2

WARNING:  Descriptions of 441 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0011604 [details] [associations]
            symbol:Iswi "Imitation SWI" species:7227 "Drosophila
            melanogaster" [GO:0006338 "chromatin remodeling"
            evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
            evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
            evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
            [GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
            complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
            evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
            mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
            evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
            [GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0006351 "transcription,
            DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
            complex" evidence=IPI] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IPI]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
            receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
            "muscle organ development" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
            rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
            evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
            [GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
            [GO:0035063 "nuclear speck organization" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
            GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
            GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
            GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
            ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
            SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
            RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
            UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
            SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
            STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
            EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
            KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
            InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
            EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
            Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
            GO:GO:0035063 Uniprot:Q24368
        Length = 1027

 Score = 1261 (449.0 bits), Expect = 1.1e-135, Sum P(2) = 1.1e-135
 Identities = 234/298 (78%), Positives = 260/298 (87%)

Query:   132 KEK-KNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLN 190
             K+K K  D +DHRHR TEQEEDEELLA  ++  K I  F+ SP YIK GEMRDYQ+RGLN
Sbjct:    79 KDKDKEKDVADHRHRKTEQEEDEELLAE-DSATKEIFRFDASPAYIKSGEMRDYQIRGLN 137

Query:   191 WMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFK 250
             WMISLYENGINGILADEMGLGKTLQTISLLGY+KH++N AGPHIVIVPKSTL NW+NEFK
Sbjct:   138 WMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFK 197

Query:   251 KWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDE 310
             KWCP+LRA+CLIGDQD RN  IRDV+MPGEWDVC+TSYEMCIRE+ VFKKFNWRYLVIDE
Sbjct:   198 KWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDE 257

Query:   311 AHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWF 370
             AHRIKNEKSKLSEI+REFKT NRLL+TGTPLQNNLHELWALLNFLLP           WF
Sbjct:   258 AHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWF 317

Query:   371 NTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             NT   +GD ++I RLH+VLKPFLLRRLK+EVEKRLKPKKE+K++VGLSKMQR+WYTKV
Sbjct:   318 NTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKV 375

 Score = 301 (111.0 bits), Expect = 1.7e-25, P = 1.7e-25
 Identities = 61/75 (81%), Positives = 65/75 (86%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELLA  ++  K I  F+ SP YIK GEMRDYQ+RGLNWMISLYENGINGILAD
Sbjct:    95 TEQEEDEELLAE-DSATKEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILAD 153

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   154 EMGLGKTLQTISLLG 168

 Score = 89 (36.4 bits), Expect = 1.1e-135, Sum P(2) = 1.1e-135
 Identities = 16/18 (88%), Positives = 18/18 (100%)

Query:    81 RFDYLLKQTEIFSHFMTN 98
             RFD+LLKQTEIF+HFMTN
Sbjct:    46 RFDFLLKQTEIFTHFMTN 63


>UNIPROTKB|E1C0M8 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
            chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
            silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
            [GO:0009790 "embryo development" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
            GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
            IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
            Uniprot:E1C0M8
        Length = 1038

 Score = 1207 (429.9 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
 Identities = 220/297 (74%), Positives = 252/297 (84%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE SP Y+K G++RDYQVRGLNW
Sbjct:   116 EKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNW 175

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWMNEFK+
Sbjct:   176 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKR 235

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLRA+CLIGD+D R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   236 WVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 295

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP           WF+
Sbjct:   296 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFD 355

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   356 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 412

 Score = 290 (107.1 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 56/75 (74%), Positives = 62/75 (82%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   131 TEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 190

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   191 EMGLGKTLQTISLLG 205

 Score = 74 (31.1 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    73 RANRFEYLLKQTELFAHFI 91


>UNIPROTKB|F1P0A4 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] InterPro:IPR000330
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
            GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
            EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
            ArrayExpress:F1P0A4 Uniprot:F1P0A4
        Length = 469

 Score = 1207 (429.9 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
 Identities = 220/297 (74%), Positives = 252/297 (84%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE SP Y+K G++RDYQVRGLNW
Sbjct:   116 EKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNW 175

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWMNEFK+
Sbjct:   176 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKR 235

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLRA+CLIGD+D R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   236 WVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 295

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP           WF+
Sbjct:   296 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFD 355

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   356 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 412

 Score = 290 (107.1 bits), Expect = 3.1e-25, P = 3.1e-25
 Identities = 56/75 (74%), Positives = 62/75 (82%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   131 TEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 190

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   191 EMGLGKTLQTISLLG 205

 Score = 74 (31.1 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    73 RANRFEYLLKQTELFAHFI 91


>MGI|MGI:1935129 [details] [associations]
            symbol:Smarca5 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 5"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISO] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
            break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
            evidence=ISO] [GO:0006338 "chromatin remodeling"
            evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
            initiation" evidence=ISO] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
            "NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
            MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
            GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
            GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
            GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
            HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
            EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
            EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
            ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
            MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
            PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
            UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
            Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
        Length = 1051

 Score = 1196 (426.1 bits), Expect = 3.0e-127, Sum P(2) = 3.0e-127
 Identities = 217/297 (73%), Positives = 253/297 (85%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW
Sbjct:   130 EKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNW 189

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWM+EFKK
Sbjct:   190 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKK 249

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLR++CLIGD++ R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   250 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 309

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW+LLNFLLP           WF+
Sbjct:   310 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 369

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   370 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 426

 Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   145 TEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 204

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   205 EMGLGKTLQTISLLG 219

 Score = 74 (31.1 bits), Expect = 3.0e-127, Sum P(2) = 3.0e-127
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    87 RANRFEYLLKQTELFAHFI 105


>ZFIN|ZDB-GENE-021125-1 [details] [associations]
            symbol:smarca5 "SWI/SNF related, matrix associated,
            actin dependent regulator of chromatin, subfamily a, member 5"
            species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
            GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
            IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
            ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
        Length = 1035

 Score = 1194 (425.4 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
 Identities = 218/297 (73%), Positives = 252/297 (84%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL+  +        F++SP Y+K G++RDYQVRGLNW
Sbjct:   114 EKQNLLSAGDNRHRRTEQEEDEELLSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNW 173

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWMNEFK+
Sbjct:   174 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKR 233

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W P+L+A+CLIGD++ R A IRD ++PGEWDVC+TSYEM I ER VFKKFNWRYLVIDEA
Sbjct:   234 WVPSLKAVCLIGDREERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEA 293

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP           WF+
Sbjct:   294 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFD 353

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH+VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYTK+
Sbjct:   354 TNNCLGDTKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKI 410

 Score = 286 (105.7 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+  +        F++SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   129 TEQEEDEELLSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILAD 188

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   189 EMGLGKTLQTISLLG 203

 Score = 75 (31.5 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    71 RTNRFEYLLKQTEVFAHFI 89

 Score = 38 (18.4 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query:   151 EDEELLANANTEGKT---IVSFENSPFYIKGGEMRDYQVRGLNWM 192
             E +E +AN   EG      +  ENS +  +G + R+ +    NW+
Sbjct:   670 EMKEKMANLG-EGSLRNFTMDTENSVYNFEGEDYREKKKVVTNWI 713


>UNIPROTKB|F1N052 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
            complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0009790 "embryo development"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
            GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
            GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
            Ensembl:ENSBTAT00000004408 Uniprot:F1N052
        Length = 1052

 Score = 1193 (425.0 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 216/297 (72%), Positives = 253/297 (85%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW
Sbjct:   131 EKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNW 190

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWM+EFK+
Sbjct:   191 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKR 250

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLR++CLIGD++ R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 310

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW+LLNFLLP           WF+
Sbjct:   311 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 370

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   371 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 427

 Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   146 TEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 205

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   206 EMGLGKTLQTISLLG 220

 Score = 74 (31.1 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    88 RANRFEYLLKQTELFAHFI 106


>UNIPROTKB|E2QWV0 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            [GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
            "embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
            assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
            "chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
            GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
            GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
            SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
            EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
            Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
            NextBio:20851293 Uniprot:E2QWV0
        Length = 1052

 Score = 1193 (425.0 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 216/297 (72%), Positives = 253/297 (85%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW
Sbjct:   131 EKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNW 190

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWM+EFK+
Sbjct:   191 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKR 250

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLR++CLIGD++ R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 310

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW+LLNFLLP           WF+
Sbjct:   311 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 370

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   371 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 427

 Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   146 TEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 205

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   206 EMGLGKTLQTISLLG 220

 Score = 74 (31.1 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    88 RANRFEYLLKQTELFAHFI 106


>UNIPROTKB|O60264 [details] [associations]
            symbol:SMARCA5 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member 5"
            species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
            "chromatin silencing complex" evidence=IEA] [GO:0006302
            "double-strand break repair" evidence=IEA] [GO:0009790 "embryo
            development" evidence=IEA] [GO:0006334 "nucleosome assembly"
            evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
            [GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
            complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
            chromosome" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
            "CENP-A containing nucleosome assembly at centromere" evidence=TAS]
            [GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
            catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
            GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
            GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
            GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
            OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
            EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
            UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
            IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
            PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
            Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
            CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
            HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
            InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
            ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
            Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
        Length = 1052

 Score = 1193 (425.0 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 216/297 (72%), Positives = 253/297 (85%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW
Sbjct:   131 EKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNW 190

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWM+EFK+
Sbjct:   191 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKR 250

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLR++CLIGD++ R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 310

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW+LLNFLLP           WF+
Sbjct:   311 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 370

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   371 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 427

 Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   146 TEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 205

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   206 EMGLGKTLQTISLLG 220

 Score = 74 (31.1 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    88 RANRFEYLLKQTELFAHFI 106


>UNIPROTKB|F1RRG9 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
            complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0009790 "embryo development"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
            GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
            GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
            GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
            UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
            KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
        Length = 1052

 Score = 1193 (425.0 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 216/297 (72%), Positives = 253/297 (85%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW
Sbjct:   131 EKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNW 190

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWM+EFK+
Sbjct:   191 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKR 250

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLR++CLIGD++ R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   251 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 310

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW+LLNFLLP           WF+
Sbjct:   311 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 370

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   371 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 427

 Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   146 TEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 205

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   206 EMGLGKTLQTISLLG 220

 Score = 74 (31.1 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    88 RANRFEYLLKQTELFAHFI 106


>RGD|1308832 [details] [associations]
            symbol:Smarca5 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 5"
            species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
            at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006302 "double-strand break repair"
            evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
            evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
            "DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
            "embryo development" evidence=ISO] [GO:0016584 "nucleosome
            positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
            complex" evidence=ISO] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
            replication fork" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
            IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
            UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
        Length = 1051

 Score = 1193 (425.0 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 216/297 (72%), Positives = 253/297 (85%)

Query:   133 EKKNV-DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
             EK+N+    D+RHR TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW
Sbjct:   130 EKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNW 189

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI GPH+V+VPKSTL NWM+EFK+
Sbjct:   190 LISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKR 249

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W PTLR++CLIGD++ R A +RDV++PGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEA
Sbjct:   250 WVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEA 309

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW+LLNFLLP           WF+
Sbjct:   310 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 369

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T   +GD  ++ERLH VL+PFLLRR+K++VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   370 TNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRI 426

 Score = 291 (107.5 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL  ++        FE+SP Y+K G++RDYQVRGLNW+ISLYENGINGILAD
Sbjct:   145 TEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILAD 204

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTISLLG
Sbjct:   205 EMGLGKTLQTISLLG 219

 Score = 74 (31.1 bits), Expect = 6.3e-127, Sum P(2) = 6.3e-127
 Identities = 12/19 (63%), Positives = 18/19 (94%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             + +RF+YLLKQTE+F+HF+
Sbjct:    87 RANRFEYLLKQTELFAHFI 105


>UNIPROTKB|F1P3Q4 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007420 "brain development" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
            complex" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0036310 "annealing helicase activity"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
            GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
            SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
            IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
        Length = 982

 Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
 Identities = 233/350 (66%), Positives = 273/350 (78%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K++K   + 
Sbjct:    18 RFEFLLKQTELFAHFIQP-------------AAQKSPTSPLKVKLGRPRIKKDEKQSLIS 64

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       + FE SP Y+KGG +RDYQVRGLNWMISLYEN
Sbjct:    65 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEESPSYVKGGTLRDYQVRGLNWMISLYEN 124

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LRA
Sbjct:   125 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRA 184

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             +CLIGD+DAR A IRDVMMPGEWDVC+TSYEM I+E+ VFKKFNWRYLVIDEAHRIKNEK
Sbjct:   185 VCLIGDKDARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEK 244

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   245 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 304

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K+EVEK L PKKE+K+Y+GLSKMQREWYT++
Sbjct:   305 QKLVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRI 354

 Score = 300 (110.7 bits), Expect = 2.1e-25, P = 2.1e-25
 Identities = 56/75 (74%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       + FE SP Y+KGG +RDYQVRGLNWMISLYENG+NGILAD
Sbjct:    73 TEQEEDEELLSESRKTSNVCIRFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILAD 132

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   133 EMGLGKTLQTIALLG 147


>UNIPROTKB|E2QVR5 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
            Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
        Length = 1073

 Score = 1181 (420.8 bits), Expect = 5.0e-125, Sum P(2) = 5.0e-125
 Identities = 214/288 (74%), Positives = 247/288 (85%)

Query:   142 HRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGIN 201
             +RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+N
Sbjct:   156 YRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVN 215

Query:   202 GILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICL 261
             GILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR IC 
Sbjct:   216 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICF 275

Query:   262 IGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKL 321
             +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEKSKL
Sbjct:   276 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 335

Query:   322 SEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSI 381
             SEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD  +
Sbjct:   336 SEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKL 395

Query:   382 IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREW-YTKV 428
             +ERLH+VLKPFLLRR+K++VEK L PKKE+KVY+GLSKMQREW YTK+
Sbjct:   396 VERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWWYTKI 443

 Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   161 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 220

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   221 EMGLGKTLQTIALLG 235

 Score = 68 (29.0 bits), Expect = 5.0e-125, Sum P(2) = 5.0e-125
 Identities = 11/16 (68%), Positives = 16/16 (100%)

Query:    81 RFDYLLKQTEIFSHFM 96
             RF++LLKQTE+F+HF+
Sbjct:   103 RFEFLLKQTELFAHFI 118


>ZFIN|ZDB-GENE-070705-296 [details] [associations]
            symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
            EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
            UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
            GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
            Uniprot:A5WUY4
        Length = 1036

 Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
 Identities = 232/352 (65%), Positives = 272/352 (77%)

Query:    78 KIDRFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKNV 137
             + +RF++LLKQTE+F+HF+  Q                                 EK+N+
Sbjct:    51 RANRFEFLLKQTELFAHFI--QPASQKSPTSPLKVKMGRPRIKQD----------EKQNL 98

Query:   138 -DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLY 196
                 D+RHR TEQEEDEELL+ +      +V FE SP YIK G +RDYQ+RGLNWMISLY
Sbjct:    99 LSVGDNRHRRTEQEEDEELLSESRKADNVLVRFEESPSYIKNGTLRDYQIRGLNWMISLY 158

Query:   197 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTL 256
             ENGINGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W PTL
Sbjct:   159 ENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTL 218

Query:   257 RAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKN 316
             +A+CLIG++D R A IRDVMMPGEWDVC+TSYEM IRE+ VFKKFNWRYLVIDEAHRIKN
Sbjct:   219 KAVCLIGNKDERAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKN 278

Query:   317 EKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFM 376
             EKSKLSEI REFKTTNRLLLTGTPLQNNLHELW+LLNFLLP           WF+T   +
Sbjct:   279 EKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTN-CL 337

Query:   377 GDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             GD  ++ERLH+VL+PFLLRR+K+EVEK L PKKE+K+Y+GLSKMQREWYT++
Sbjct:   338 GDQKLVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRI 389

 Score = 298 (110.0 bits), Expect = 3.7e-25, P = 3.7e-25
 Identities = 57/75 (76%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +      +V FE SP YIK G +RDYQ+RGLNWMISLYENGINGILAD
Sbjct:   109 TEQEEDEELLSESRKADNVLVRFEESPSYIKNGTLRDYQIRGLNWMISLYENGINGILAD 168

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   169 EMGLGKTLQTIALLG 183


>UNIPROTKB|F6TQG2 [details] [associations]
            symbol:SMARCA1 "Probable global transcription activator
            SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
            EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
            ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
            Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
            Uniprot:F6TQG2
        Length = 1005

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 226/350 (64%), Positives = 270/350 (77%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K++K   + 
Sbjct:    73 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNMKLGRPRIKKDEKQSLIS 119

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       + FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   120 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 179

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   180 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 239

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   240 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 299

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   300 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 359

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   360 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 409

 Score = 293 (108.2 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 54/75 (72%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       + FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   128 TEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 187

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   188 EMGLGKTLQTIALLG 202


>UNIPROTKB|P28370 [details] [associations]
            symbol:SMARCA1 "Probable global transcription activator
            SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
            [GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
            "nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
            "CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
            evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
            GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
            EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
            IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
            RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
            ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
            MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
            PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
            Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
            KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
            GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
            neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
            InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
            GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
            CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
            Uniprot:P28370
        Length = 1054

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 226/350 (64%), Positives = 270/350 (77%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K++K   + 
Sbjct:    94 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNMKLGRPRIKKDEKQSLIS 140

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       + FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   141 AGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   201 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 260

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   261 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 320

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   321 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 380

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   381 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 430

 Score = 293 (108.2 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 54/75 (72%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       + FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   149 TEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 208

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   209 EMGLGKTLQTIALLG 223


>UNIPROTKB|F1RTI9 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
            activity" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
            GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
        Length = 1073

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 227/350 (64%), Positives = 269/350 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    97 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNIKLGRPRIKKDDKQSLIS 143

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   144 AGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 203

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   204 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 263

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   264 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 323

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   324 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 383

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   384 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 433

 Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   152 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 211

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   212 EMGLGKTLQTIALLG 226


>UNIPROTKB|I3LTT5 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 EMBL:CU695129
            Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
        Length = 778

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 227/350 (64%), Positives = 269/350 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    97 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNIKLGRPRIKKDDKQSLIS 143

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   144 AGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 203

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   204 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 263

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   264 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 323

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   324 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 383

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   384 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 433

 Score = 294 (108.6 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   152 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 211

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   212 EMGLGKTLQTIALLG 226


>UNIPROTKB|K7GLQ2 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
            Uniprot:K7GLQ2
        Length = 1073

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 227/350 (64%), Positives = 269/350 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    97 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNIKLGRPRIKKDDKQSLIS 143

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   144 AGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 203

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   204 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 263

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   264 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 323

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   324 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 383

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   384 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 433

 Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   152 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 211

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   212 EMGLGKTLQTIALLG 226


>UNIPROTKB|K7GMM0 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
            Uniprot:K7GMM0
        Length = 1057

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 227/350 (64%), Positives = 269/350 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    97 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNIKLGRPRIKKDDKQSLIS 143

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   144 AGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 203

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   204 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 263

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   264 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 323

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   324 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 383

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   384 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 433

 Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   152 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 211

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   212 EMGLGKTLQTIALLG 226


>UNIPROTKB|K7GNV1 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
            Uniprot:K7GNV1
        Length = 1061

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 227/350 (64%), Positives = 269/350 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    97 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNIKLGRPRIKKDDKQSLIS 143

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   144 AGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 203

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   204 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 263

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   264 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 323

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   324 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 383

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   384 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 433

 Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   152 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 211

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   212 EMGLGKTLQTIALLG 226


>UNIPROTKB|F1N166 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
            activity" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
            GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
            Ensembl:ENSBTAT00000002973 Uniprot:F1N166
        Length = 1078

 Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
 Identities = 226/350 (64%), Positives = 269/350 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    97 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNMKLGRPRIKKDDKQSLIS 143

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   144 VGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 203

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   204 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 263

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   264 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 323

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVR+FK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   324 SKLSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTKNCLGD 383

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   384 QKLVERLHTVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 433

 Score = 294 (108.6 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   152 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 211

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   212 EMGLGKTLQTIALLG 226


>MGI|MGI:1935127 [details] [associations]
            symbol:Smarca1 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
            remodeling" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
            development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
            [GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
            neural precursor cell proliferation" evidence=IGI;IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
            GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
            CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
            EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
            RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
            ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
            PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
            Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
            Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
            UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
            NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
            GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
        Length = 1046

 Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
 Identities = 227/357 (63%), Positives = 270/357 (75%)

Query:    74 LLGPKIDRFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKE 133
             L   +  RF++LLKQTE+F+HF+                                 + K+
Sbjct:    91 LKADRAKRFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNMKLARPRVKKD 137

Query:   134 KKN--VDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNW 191
              K   +   D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW
Sbjct:   138 DKQSLISVGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNW 197

Query:   192 MISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKK 251
             +ISLYENG+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+
Sbjct:   198 LISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKR 257

Query:   252 WCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEA 311
             W P+LR IC +GD+D R A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEA
Sbjct:   258 WVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEA 317

Query:   312 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN 371
             HRIKNEKSKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+
Sbjct:   318 HRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFD 377

Query:   372 TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             T+  +GD  ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   378 TKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 434

 Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   153 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 212

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   213 EMGLGKTLQTIALLG 227


>RGD|1561046 [details] [associations]
            symbol:Smarca1 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 1"
            species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
            renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
            evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
            "neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
            evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
            complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
            cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
            activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
            PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
            ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
        Length = 1034

 Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
 Identities = 225/350 (64%), Positives = 267/350 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    74 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNMKLARPRVKKDDKQSLIS 120

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   121 VGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 180

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRN  GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   181 GVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKRWVPSLRV 240

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+D R A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   241 ICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 300

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   301 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 360

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+K+Y+GLSKMQREWYTK+
Sbjct:   361 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 410

 Score = 294 (108.6 bits), Expect = 9.8e-25, P = 9.8e-25
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   129 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 188

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   189 EMGLGKTLQTIALLG 203


>UNIPROTKB|F6XTU7 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
            SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
            Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
        Length = 1075

 Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
 Identities = 225/347 (64%), Positives = 266/347 (76%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN--VD 138
             RF++LLKQTE+F+HF+                                 + K+ K   + 
Sbjct:    94 RFEFLLKQTELFAHFIQPSA-------------QKSPTSPLNMKLGRPRIKKDDKQSLIS 140

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               D+RHR TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYEN
Sbjct:   141 AGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYEN 200

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             G+NGILADEMGLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR 
Sbjct:   201 GVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRV 260

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             IC +GD+DAR A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEK
Sbjct:   261 ICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEK 320

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             SKLSEIVREFK+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD
Sbjct:   321 SKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGD 380

Query:   379 HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
               ++ERLH+VLKPFLLRR+K++VEK L PKKE+KVY+GLSKMQREW+
Sbjct:   381 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWF 427

 Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEELL+ +       V FE SP Y+KGG +RDYQ+RGLNW+ISLYENG+NGILAD
Sbjct:   149 TEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILAD 208

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTI+LLG
Sbjct:   209 EMGLGKTLQTIALLG 223


>WB|WBGene00002169 [details] [associations]
            symbol:isw-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0016246 "RNA interference"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0040026 "positive regulation of vulval development"
            evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
            RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
            STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
            KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
            GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
            KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
            Uniprot:P41877
        Length = 1009

 Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
 Identities = 198/295 (67%), Positives = 238/295 (80%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             KKN    DHRHR TEQEEDEE++A+A  +   +V F+ SPFYI+ GEMRDYQVRGLNW+ 
Sbjct:    86 KKNGIDGDHRHRKTEQEEDEEMVADA-IKSDDLVIFDKSPFYIENGEMRDYQVRGLNWLA 144

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
             SL  N INGILADEMGLGKTLQTIS++GYMKHY+N A PH+VIVPKSTL NW NEFKKWC
Sbjct:   145 SLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWC 204

Query:   254 PTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHR 313
             P++ A+ LIGD+ ARN ++RDV++P ++DVC T+YEM ++ +   KK NWRY++IDEAHR
Sbjct:   205 PSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHR 264

Query:   314 IKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTE 373
             IKNEKSKLSE VRE  + NRLL+TGTPLQNNLHELWALLNFLLP           WF+ +
Sbjct:   265 IKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSND 324

Query:   374 EFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
                G+  +++RLH VL+PFLLRR+KS+VEK L PKKE+KVYVGLSKMQREWYTKV
Sbjct:   325 AMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKV 379

 Score = 272 (100.8 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
 Identities = 53/75 (70%), Positives = 63/75 (84%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TEQEEDEE++A+A  +   +V F+ SPFYI+ GEMRDYQVRGLNW+ SL  N INGILAD
Sbjct:    99 TEQEEDEEMVADA-IKSDDLVIFDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILAD 157

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTIS++G
Sbjct:   158 EMGLGKTLQTISMIG 172

 Score = 41 (19.5 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query:   304 RYLVIDEAHRIKNEKSKLSEIVRE 327
             R+LV  E HR+ ++K  + E +R+
Sbjct:   909 RFLVC-ETHRLGHDKENVFEELRQ 931

 Score = 38 (18.4 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query:   148 EQEEDEELLANANTEGKTIVSFENSPFYIKGGE 180
             EQEE  ELL  + T+  T   F+    +++G E
Sbjct:   787 EQEEKAELLTQSVTDW-TKREFQQ---FVRGNE 815


>UNIPROTKB|J9NZH0 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
            Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
        Length = 850

 Score = 919 (328.6 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
 Identities = 165/217 (76%), Positives = 190/217 (87%)

Query:   209 GLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDAR 268
             GLGKTLQTI+LLGY+KHYRNI GPH+V+VPKSTL NWMNEFK+W P+LR IC +GD+DAR
Sbjct:     3 GLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDAR 62

Query:   269 NAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF 328
              A IRD MMPGEWDVC+TSYEM I+E+ VFKKF+WRYLVIDEAHRIKNEKSKLSEIVREF
Sbjct:    63 AAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF 122

Query:   329 KTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSV 388
             K+TNRLLLTGTPLQNNLHELWALLNFLLP           WF+T+  +GD  ++ERLH+V
Sbjct:   123 KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAV 182

Query:   389 LKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             LKPFLLRR+K++VEK L PKKE+KVY+GLSKMQREW+
Sbjct:   183 LKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWF 219

 Score = 59 (25.8 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
 Identities = 12/13 (92%), Positives = 13/13 (100%)

Query:    64 GLGKTLQTISLLG 76
             GLGKTLQTI+LLG
Sbjct:     3 GLGKTLQTIALLG 15


>DICTYBASE|DDB_G0292948 [details] [associations]
            symbol:isw "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
            complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
            GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
            GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
            RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
            PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
            KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
            ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
        Length = 1221

 Score = 890 (318.4 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
 Identities = 173/351 (49%), Positives = 225/351 (64%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKNVDPS 140
             R  YLL++TEIF+HF++N                              +           
Sbjct:   174 RLKYLLERTEIFTHFVSNSNNNNNTKKTKTKSPVLSSSSASSSNNNNNNNNNGSIVSSTP 233

Query:   141 DHRHRMTEQEEDEELLANANTEGK--TIVSFENSPFYIKGGEMRDYQVRGLNWMISLYEN 198
               R  +TE+ EDE ++     E +  +   F +SP YIK G MRDYQV GLNW+I LYE 
Sbjct:   234 TKRGHITEEAEDEAIMNETMEEEEPHSFNFFTSSPPYIKSGTMRDYQVYGLNWLIQLYER 293

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
             GINGILADEMGLGKTLQTISLLGY+  Y+ I GPH++I PKSTL  W  EF +WCP LR 
Sbjct:   294 GINGILADEMGLGKTLQTISLLGYLSEYKGIRGPHLIIAPKSTLSGWAKEFTRWCPFLRV 353

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
             +   G ++ R  + ++ ++  ++DVCIT+YE+ IRE+  FKKF+WRY++IDEAHRIKNE 
Sbjct:   354 VRFHGSKEEREDIKKNQLIFKKFDVCITTYEVAIREKSTFKKFSWRYIIIDEAHRIKNEN 413

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN-TEEFMG 377
             S LS+ VR F +  RLL+TGTPLQNNLHELW+LLNFLLP           WF+       
Sbjct:   414 SVLSKGVRMFNSQFRLLITGTPLQNNLHELWSLLNFLLPDVFSSSDDFDKWFDLANNTEN 473

Query:   378 DHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
                +I++LH VL+PFLLRR+K+EVEK L PKKE+K++VGLS MQ+EWY ++
Sbjct:   474 QQEVIDKLHKVLRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRL 524

 Score = 240 (89.5 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 50/78 (64%), Positives = 58/78 (74%)

Query:     1 MTEQEEDEELLANANTEGK--TIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGI 58
             +TE+ EDE ++     E +  +   F +SP YIK G MRDYQV GLNW+I LYE GINGI
Sbjct:   239 ITEEAEDEAIMNETMEEEEPHSFNFFTSSPPYIKSGTMRDYQVYGLNWLIQLYERGINGI 298

Query:    59 LADEMGLGKTLQTISLLG 76
             LADEMGLGKTLQTISLLG
Sbjct:   299 LADEMGLGKTLQTISLLG 316

 Score = 39 (18.8 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query:   400 EVEKRLKPKKELKV 413
             E EKR K K++LK+
Sbjct:  1106 EAEKRKKEKEKLKL 1119

 Score = 38 (18.4 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query:   397 LKSEVEKRLKPKKELKVYVGLSK 419
             L  ++ K   P  ELK+  GL K
Sbjct:  1009 LNYKINKYKNPWIELKIQYGLKK 1031

 Score = 38 (18.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query:   139 PSDHRHRMTEQEEDEE 154
             P +    M E+EE+EE
Sbjct:  1185 PVEEEEPMEEEEEEEE 1200

 Score = 37 (18.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             +E++ ++  +      E+EE+EE
Sbjct:  1187 EEEEPMEEEEEEEEEVEEEEEEE 1209


>TAIR|locus:2182978 [details] [associations]
            symbol:CHR17 "chromatin remodeling factor17" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
            [GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
            cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
            by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
            process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
            evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
            [GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=RCA]
            [GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
            proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
            process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
            [GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
            "gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
            chromosome organization" evidence=RCA] [GO:0045492 "xylan
            biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
            methylation" evidence=RCA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IGI] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
            IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
            ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
            EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
            PhylomeDB:F4JY25 Uniprot:F4JY25
        Length = 1072

 Score = 837 (299.7 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
 Identities = 159/297 (53%), Positives = 211/297 (71%)

Query:   133 EKKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVS----FENSPFYIKGGEMRDYQVRG 188
             +KK      H  ++TE+EEDEE L     EG  + S        P  I+G ++RDYQ+ G
Sbjct:   145 QKKGKGRGRHSSKLTEEEEDEECLKEE--EGGIVGSGGTRLLTQPACIQG-KLRDYQLAG 201

Query:   189 LNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNE 248
             LNW+I LYENGINGILADEMGLGKTLQTISLL Y+  YR I GPH+V+ PKSTL NWMNE
Sbjct:   202 LNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNE 261

Query:   249 FKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVI 308
              +++CP LRA+  +G+ + R  +  ++++ G++D+C+TS+EM I+E+   ++F+WRY++I
Sbjct:   262 IRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTTLRRFSWRYIII 321

Query:   309 DEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXX 368
             DEAHRIKNE S LS+ +R F T  RLL+TGTPLQNNLHELWALLNFLLP           
Sbjct:   322 DEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDE 381

Query:   369 WFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             WF          ++++LH VL+PFLLRRLKS+VEK L PKKE  + VG+S+MQ+++Y
Sbjct:   382 WFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYY 438

 Score = 215 (80.7 bits), Expect = 2.8e-14, P = 2.8e-14
 Identities = 49/79 (62%), Positives = 57/79 (72%)

Query:     1 MTEQEEDEELLANANTEGKTIVS----FENSPFYIKGGEMRDYQVRGLNWMISLYENGIN 56
             +TE+EEDEE L     EG  + S        P  I+G ++RDYQ+ GLNW+I LYENGIN
Sbjct:   158 LTEEEEDEECLKEE--EGGIVGSGGTRLLTQPACIQG-KLRDYQLAGLNWLIRLYENGIN 214

Query:    57 GILADEMGLGKTLQTISLL 75
             GILADEMGLGKTLQTISLL
Sbjct:   215 GILADEMGLGKTLQTISLL 233

 Score = 58 (25.5 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
 Identities = 10/15 (66%), Positives = 13/15 (86%)

Query:    81 RFDYLLKQTEIFSHF 95
             R  YLL+QTE+F+HF
Sbjct:   122 RIKYLLQQTELFAHF 136


>SGD|S000005831 [details] [associations]
            symbol:ISW2 "ATP-dependent DNA translocase involved in
            chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
            evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
            regulation of antisense RNA transcription" evidence=IGI]
            [GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
            "CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
            transcription from RNA polymerase II promoter by pheromones"
            evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
            translocase activity" evidence=IDA] [GO:0003697 "single-stranded
            DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
            "termination of RNA polymerase II transcription" evidence=IGI]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
            GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
            RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
            DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
            PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
            GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
            NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
            Uniprot:Q08773
        Length = 1120

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 174/350 (49%), Positives = 226/350 (64%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKNVDPS 140
             RF YLL  T++F HF+   G+                            L+K    V  S
Sbjct:    90 RFKYLLGVTDLFRHFI---GIKAKHDKNIQKLLKQLDSDAN-------KLSKSHSTVSSS 139

Query:   141 DHRHRMTEQEEDEELLANANTE----GKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLY 196
                HR TE+EED EL+A+   E     +  +    SP ++K G++RDYQV+GLNW+ISL+
Sbjct:   140 SRHHRKTEKEEDAELMADEEEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLH 199

Query:   197 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTL 256
             EN ++GILADEMGLGKTLQTIS LGY+++ + I GP ++IVPKSTL NW  EF KW P +
Sbjct:   200 ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNV 259

Query:   257 RAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKN 316
               + L GD+D R  ++R++++   +DV ITSYEM IRE+   K+  W+Y+VIDEAHRIKN
Sbjct:   260 NVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKN 319

Query:   317 EKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFM 376
             E+S LS+I+R F + NRLL+TGTPLQNNLHELWALLNFLLP           WF      
Sbjct:   320 EQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSE 379

Query:   377 GDHSI-IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
              D  I I++LHSVL PFLLRR+K++VEK L PK E  VYVG++ MQ +WY
Sbjct:   380 QDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWY 429

 Score = 228 (85.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 46/79 (58%), Positives = 60/79 (75%)

Query:     2 TEQEEDEELLANANTE----GKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGING 57
             TE+EED EL+A+   E     +  +    SP ++K G++RDYQV+GLNW+ISL+EN ++G
Sbjct:   146 TEKEEDAELMADEEEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSG 205

Query:    58 ILADEMGLGKTLQTISLLG 76
             ILADEMGLGKTLQTIS LG
Sbjct:   206 ILADEMGLGKTLQTISFLG 224

 Score = 41 (19.5 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query:   141 DHRHRMTEQEEDEELLANA-NTEG 163
             D R+  ++ EE+E    NA NTEG
Sbjct:   825 DIRNEGSDAEEEEGEYKNAANTEG 848

 Score = 41 (19.5 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFK 329
             KK N++    D    I+NE S   E   E+K
Sbjct:   811 KKVNYKVTSYDITGDIRNEGSDAEEEEGEYK 841

 Score = 37 (18.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query:   130 LTKEKKNVDPSDH-RHRMTEQEEDEELLANANTEGKTI 166
             + +E +  D +   R R +   ED  L  N +T   T+
Sbjct:  1055 IVREYEQPDANKKKRSRTSATREDTPLSQNESTRASTV 1092


>UNIPROTKB|G4NCV5 [details] [associations]
            symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
            ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
            GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
        Length = 1128

 Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
 Identities = 166/302 (54%), Positives = 214/302 (70%)

Query:   131 TKEKKNVD----PSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQV 186
             TK KK        S  R R TE EED ELL +    G     F  SP +I+G  MRDYQ+
Sbjct:   133 TKGKKGASRQGGASSGRVRRTEAEEDAELLKDEKHGGSAETVFRESPAFIQG-TMRDYQI 191

Query:   187 RGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWM 246
              GLNW+ISL+ENGI+GILADEMGLGKTLQTIS LGY++H   I GPH+VIVPKSTL NW 
Sbjct:   192 AGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMGITGPHLVIVPKSTLDNWK 251

Query:   247 NEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYL 306
              EF KW P +  + L G ++ R A+I + ++   +DVCITSYEM +RE+   KKF W Y+
Sbjct:   252 REFGKWTPEVNVLVLQGAKEERAALIAERLVDESFDVCITSYEMILREKSHLKKFAWEYI 311

Query:   307 VIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXX 366
             +IDEAHRIKNE+S L++++R F + NRLL+TGTPLQNN+HELWALLNFLLP         
Sbjct:   312 IIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTPLQNNIHELWALLNFLLPDVFGDSEAF 371

Query:   367 XXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYT 426
               WF+ E    D +++++LH VL+PFLLRR+K++VEK L PKKE+ +Y+ +++MQR WY 
Sbjct:   372 DQWFSGEGQDSD-TVVQQLHRVLRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQ 430

Query:   427 KV 428
             K+
Sbjct:   431 KI 432

 Score = 239 (89.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
 Identities = 49/75 (65%), Positives = 56/75 (74%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILAD 61
             TE EED ELL +    G     F  SP +I+G  MRDYQ+ GLNW+ISL+ENGI+GILAD
Sbjct:   153 TEAEEDAELLKDEKHGGSAETVFRESPAFIQG-TMRDYQIAGLNWLISLHENGISGILAD 211

Query:    62 EMGLGKTLQTISLLG 76
             EMGLGKTLQTIS LG
Sbjct:   212 EMGLGKTLQTISFLG 226

 Score = 48 (22.0 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query:   292 IRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             IR+  +F+ F+W +L        +   + L+ IV+EF   N
Sbjct:  1002 IRDSALFR-FDWFFLSRTPTELSRRATTLLTTIVKEFDDMN 1041

 Score = 37 (18.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
 Identities = 7/33 (21%), Positives = 19/33 (57%)

Query:   395 RRLKSEVEKRLKPKKELKVYVGLSKMQREWYTK 427
             + L+ ++ +   P ++LK+   +S   ++ YT+
Sbjct:   942 KMLRKKMSQYRVPLQQLKINYSVSTTNKKVYTE 974


>SGD|S000000449 [details] [associations]
            symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
            chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
            "termination of RNA polymerase II transcription" evidence=IGI]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
            binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
            binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IGI] [GO:0070870 "heterochromatin
            maintenance involved in chromatin silencing" evidence=IGI;IMP]
            [GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
            transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
            remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0001178 "regulation of transcriptional start site
            selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
            evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
            GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
            GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
            GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
            PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
            EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
            SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
            STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
            GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
            OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
            Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
        Length = 1129

 Score = 834 (298.6 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
 Identities = 156/291 (53%), Positives = 210/291 (72%)

Query:   141 DHRHRMTEQEEDEELLANANTEGKTIVSFE--NSPFYIKGGEMRDYQVRGLNWMISLYEN 198
             D R R TE EED ELL   +++    + F+   SP Y+ G ++R YQ++G+NW++SL++N
Sbjct:   155 DVRRRKTEHEEDAELLKEEDSDDDESIEFQFRESPAYVNG-QLRPYQIQGVNWLVSLHKN 213

Query:   199 GINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRA 258
              I GILADEMGLGKTLQTIS LGY+++   I GP +VI PKSTL NW+ E  +W P + A
Sbjct:   214 KIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNA 273

Query:   259 ICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEK 318
               L GD++ R  +I+  ++  ++DV I SYE+ IRE+   KK NW Y++IDEAHRIKNE+
Sbjct:   274 FILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEE 333

Query:   319 SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD 378
             S LS+++REF + NRLL+TGTPLQNNLHELWALLNFLLP           WF++E    D
Sbjct:   334 SMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEED 393

Query:   379 HS-IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
                I+++LH+VL+PFLLRR+KS+VE  L PKKEL +YVG+S MQ++WY K+
Sbjct:   394 QDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKI 444

 Score = 213 (80.0 bits), Expect = 5.1e-14, P = 5.1e-14
 Identities = 42/77 (54%), Positives = 57/77 (74%)

Query:     2 TEQEEDEELLANANTEGKTIVSFE--NSPFYIKGGEMRDYQVRGLNWMISLYENGINGIL 59
             TE EED ELL   +++    + F+   SP Y+ G ++R YQ++G+NW++SL++N I GIL
Sbjct:   161 TEHEEDAELLKEEDSDDDESIEFQFRESPAYVNG-QLRPYQIQGVNWLVSLHKNKIAGIL 219

Query:    60 ADEMGLGKTLQTISLLG 76
             ADEMGLGKTLQTIS LG
Sbjct:   220 ADEMGLGKTLQTISFLG 236

 Score = 44 (20.5 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
 Identities = 7/19 (36%), Positives = 14/19 (73%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             RF++LL  + +F HF+ ++
Sbjct:   108 RFEHLLSLSGLFKHFIESK 126


>CGD|CAL0005422 [details] [associations]
            symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
            "chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
            growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
            evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
            [GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
            of antisense RNA transcription" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
            silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IEA] [GO:0046020 "negative
            regulation of transcription from RNA polymerase II promoter by
            pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
            telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
            evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
            GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
            ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
            KEGG:cal:CaO19.7401 Uniprot:Q5A310
        Length = 1056

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 158/298 (53%), Positives = 206/298 (69%)

Query:   143 RHRMTEQEEDEELLANA---NTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENG 199
             R R TE+EED ELL +    + E         SP YIK G++R+YQ++GLNW+ISLYEN 
Sbjct:    98 RRRKTEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENR 157

Query:   200 INGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAI 259
             ++GILADEMGLGKTLQTIS LGY+++ ++I GP IVIVPKSTL NW  EF KW P +  +
Sbjct:   158 LSGILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVV 217

Query:   260 CLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKS 319
              L GD++ R ++I+D +   ++DV ITS+EM +RE+   +KF W Y+V+DEAHRIKNE S
Sbjct:   218 VLQGDKEQRASIIKDQLYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDS 277

Query:   320 KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWF---NTEEFM 376
              LS+I+R F + NRLL+TGTPLQNNLHELWALLNFLLP            F   N+EE  
Sbjct:   278 SLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELD 337

Query:   377 GDHS------IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +         +  LH +L PFLLRR+K++VEK L PK E  VY+G++ MQ EWY ++
Sbjct:   338 EEEKQRRQDKAVSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRL 395

 Score = 228 (85.3 bits), Expect = 9.2e-16, P = 9.2e-16
 Identities = 47/78 (60%), Positives = 58/78 (74%)

Query:     2 TEQEEDEELLANA---NTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGI 58
             TE+EED ELL +    + E         SP YIK G++R+YQ++GLNW+ISLYEN ++GI
Sbjct:   102 TEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGI 161

Query:    59 LADEMGLGKTLQTISLLG 76
             LADEMGLGKTLQTIS LG
Sbjct:   162 LADEMGLGKTLQTISFLG 179


>UNIPROTKB|Q5A310 [details] [associations]
            symbol:ISW2 "Putative uncharacterized protein ISW2"
            species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
            formation" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
            [GO:0071280 "cellular response to copper ion" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
            GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
            ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
            KEGG:cal:CaO19.7401 Uniprot:Q5A310
        Length = 1056

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 158/298 (53%), Positives = 206/298 (69%)

Query:   143 RHRMTEQEEDEELLANA---NTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENG 199
             R R TE+EED ELL +    + E         SP YIK G++R+YQ++GLNW+ISLYEN 
Sbjct:    98 RRRKTEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENR 157

Query:   200 INGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAI 259
             ++GILADEMGLGKTLQTIS LGY+++ ++I GP IVIVPKSTL NW  EF KW P +  +
Sbjct:   158 LSGILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVV 217

Query:   260 CLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKS 319
              L GD++ R ++I+D +   ++DV ITS+EM +RE+   +KF W Y+V+DEAHRIKNE S
Sbjct:   218 VLQGDKEQRASIIKDQLYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDS 277

Query:   320 KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWF---NTEEFM 376
              LS+I+R F + NRLL+TGTPLQNNLHELWALLNFLLP            F   N+EE  
Sbjct:   278 SLSKIIRLFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELD 337

Query:   377 GDHS------IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +         +  LH +L PFLLRR+K++VEK L PK E  VY+G++ MQ EWY ++
Sbjct:   338 EEEKQRRQDKAVSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRL 395

 Score = 228 (85.3 bits), Expect = 9.2e-16, P = 9.2e-16
 Identities = 47/78 (60%), Positives = 58/78 (74%)

Query:     2 TEQEEDEELLANA---NTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGI 58
             TE+EED ELL +    + E         SP YIK G++R+YQ++GLNW+ISLYEN ++GI
Sbjct:   102 TEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGI 161

Query:    59 LADEMGLGKTLQTISLLG 76
             LADEMGLGKTLQTIS LG
Sbjct:   162 LADEMGLGKTLQTISFLG 179


>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
            symbol:PF11_0053 "PfSNF2L" species:5833
            "Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
            EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
            ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
            EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
            EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
            ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
        Length = 1426

 Score = 688 (247.2 bits), Expect = 1.4e-66, P = 1.4e-66
 Identities = 140/287 (48%), Positives = 193/287 (67%)

Query:   146 MTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILA 205
             +TE+EED  LL +AN E + I+     P  I G  M+ YQ+ GLNW+  LY   INGILA
Sbjct:   290 LTEKEEDFMLLKDANEEDEAIIL--KQPMNING-TMKPYQLEGLNWLYQLYRFKINGILA 346

Query:   206 DEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQ 265
             DEMGLGKTLQTISLL Y++  +NI    I+I P+STL NW  E KKWC  ++A    G++
Sbjct:   347 DEMGLGKTLQTISLLCYLRFNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNK 406

Query:   266 DARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIV 325
             D R  + R+ ++  ++DV +T+YE+ I+++      +W +LVIDEAHRIKNEKS LS  V
Sbjct:   407 DQRKELNRN-LLHSDFDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSV 465

Query:   326 REFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFM-GDHS---I 381
             R  ++ NRLL+TGTPL NNL ELW+LLNFL+P            FN  +    D+    I
Sbjct:   466 RFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEI 525

Query:   382 IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             I +LH++LKPF+LRRLK EVE+ L PK+E+ ++VG+SK+Q++ Y+ +
Sbjct:   526 ITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDI 572

 Score = 198 (74.8 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
 Identities = 44/75 (58%), Positives = 52/75 (69%)

Query:     1 MTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILA 60
             +TE+EED  LL +AN E + I+     P  I G  M+ YQ+ GLNW+  LY   INGILA
Sbjct:   290 LTEKEEDFMLLKDANEEDEAIIL--KQPMNING-TMKPYQLEGLNWLYQLYRFKINGILA 346

Query:    61 DEMGLGKTLQTISLL 75
             DEMGLGKTLQTISLL
Sbjct:   347 DEMGLGKTLQTISLL 361

 Score = 40 (19.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
 Identities = 6/31 (19%), Positives = 18/31 (58%)

Query:   394 LRRLKSEVEKRLKPKKELKVYVGLSKMQREW 424
             + +++  ++K LK  K+   ++ L + + +W
Sbjct:   907 INKIRRTIKKFLKNNKKNMTFLDLGERKSKW 937

 Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query:   342 QNNLHELWALLNFLLP 357
             +NN  EL  +LNF  P
Sbjct:   787 ENNKQELHDILNFGAP 802


>UNIPROTKB|Q8IIW0 [details] [associations]
            symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
            falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
            EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
            ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
            EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
            EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
            ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
        Length = 1426

 Score = 688 (247.2 bits), Expect = 1.4e-66, P = 1.4e-66
 Identities = 140/287 (48%), Positives = 193/287 (67%)

Query:   146 MTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILA 205
             +TE+EED  LL +AN E + I+     P  I G  M+ YQ+ GLNW+  LY   INGILA
Sbjct:   290 LTEKEEDFMLLKDANEEDEAIIL--KQPMNING-TMKPYQLEGLNWLYQLYRFKINGILA 346

Query:   206 DEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQ 265
             DEMGLGKTLQTISLL Y++  +NI    I+I P+STL NW  E KKWC  ++A    G++
Sbjct:   347 DEMGLGKTLQTISLLCYLRFNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNK 406

Query:   266 DARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIV 325
             D R  + R+ ++  ++DV +T+YE+ I+++      +W +LVIDEAHRIKNEKS LS  V
Sbjct:   407 DQRKELNRN-LLHSDFDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSV 465

Query:   326 REFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFM-GDHS---I 381
             R  ++ NRLL+TGTPL NNL ELW+LLNFL+P            FN  +    D+    I
Sbjct:   466 RFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEI 525

Query:   382 IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             I +LH++LKPF+LRRLK EVE+ L PK+E+ ++VG+SK+Q++ Y+ +
Sbjct:   526 ITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDI 572

 Score = 198 (74.8 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
 Identities = 44/75 (58%), Positives = 52/75 (69%)

Query:     1 MTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILA 60
             +TE+EED  LL +AN E + I+     P  I G  M+ YQ+ GLNW+  LY   INGILA
Sbjct:   290 LTEKEEDFMLLKDANEEDEAIIL--KQPMNING-TMKPYQLEGLNWLYQLYRFKINGILA 346

Query:    61 DEMGLGKTLQTISLL 75
             DEMGLGKTLQTISLL
Sbjct:   347 DEMGLGKTLQTISLL 361

 Score = 40 (19.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
 Identities = 6/31 (19%), Positives = 18/31 (58%)

Query:   394 LRRLKSEVEKRLKPKKELKVYVGLSKMQREW 424
             + +++  ++K LK  K+   ++ L + + +W
Sbjct:   907 INKIRRTIKKFLKNNKKNMTFLDLGERKSKW 937

 Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query:   342 QNNLHELWALLNFLLP 357
             +NN  EL  +LNF  P
Sbjct:   787 ENNKQELHDILNFGAP 802


>SGD|S000005816 [details] [associations]
            symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
            remodeling complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
            [GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
            "chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
            regulation of mating type switching" evidence=IMP] [GO:0031492
            "nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
            mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
            repair" evidence=IMP] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
            [GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
            [GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
            "histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
            "strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
            transcription from RNA polymerase II promoter in response to amino
            acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IPI]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
            SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
            GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
            GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
            InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
            PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
            GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
            KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
            EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
            RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
            DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
            PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
            KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
            Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
            GO:GO:0031496 Uniprot:P22082
        Length = 1703

 Score = 642 (231.1 bits), Expect = 1.7e-61, P = 1.7e-61
 Identities = 140/316 (44%), Positives = 191/316 (60%)

Query:   132 KE-KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIV-----SFENSPFYIKGGEMRDYQ 185
             KE  + VD      +M ++E D++   N+N +   +        +  P  + GG ++DYQ
Sbjct:   713 KEASEEVDDLSMVPKMKDEEYDDDD-DNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQ 771

Query:   186 VRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNW 245
             ++GL WM+SL+ N +NGILADEMGLGKT+QTISLL Y+   +NI GP++VIVP STL NW
Sbjct:   772 IKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNW 831

Query:   246 MNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRY 305
              +EF KW PTLR I   G  + R A    +   GE+DV +T++E  I+ER +  K  W +
Sbjct:   832 SSEFAKWAPTLRTISFKGSPNERKAKQAKIRA-GEFDVVLTTFEYIIKERALLSKVKWVH 890

Query:   306 LVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXX 364
             ++IDE HR+KN +SKLS  +   +    RL+LTGTPLQNNL ELWALLNF+LP       
Sbjct:   891 MIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVK 950

Query:   365 XXXXWFNTE----------EFMGDHS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELK 412
                 WFNT           E   + +  +I RLH VL+PFLLRRLK +VEK L  K E  
Sbjct:   951 SFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKV 1010

Query:   413 VYVGLSKMQREWYTKV 428
             V   +S +Q+  Y ++
Sbjct:  1011 VKCKMSALQQIMYQQM 1026

 Score = 186 (70.5 bits), Expect = 8.6e-11, P = 8.6e-11
 Identities = 34/73 (46%), Positives = 49/73 (67%)

Query:     3 EQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADE 62
             + ++D   +   N   +     +  P  + GG ++DYQ++GL WM+SL+ N +NGILADE
Sbjct:   734 DDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADE 793

Query:    63 MGLGKTLQTISLL 75
             MGLGKT+QTISLL
Sbjct:   794 MGLGKTIQTISLL 806


>CGD|CAL0000801 [details] [associations]
            symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
            "cellular_component" evidence=ND] [GO:0006312 "mitotic
            recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
            RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
            GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
            Uniprot:Q5AJ72
        Length = 864

 Score = 524 (189.5 bits), Expect = 1.6e-60, Sum P(2) = 1.6e-60
 Identities = 99/215 (46%), Positives = 144/215 (66%)

Query:   161 TEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 220
             ++  + ++    P  I GG+++DYQ+ GL W+I+L++NG+NGILADEMGLGKTLQ IS L
Sbjct:   155 SQNSSKITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFL 214

Query:   221 GYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE 280
              ++     I GP +V+VP STL NW NE +K+ P ++    IG +  RN +  D++   E
Sbjct:   215 SHLIE-NGINGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDI--DLLQQQE 271

Query:   281 W-DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
               ++ +TSYE+ IR+     K NW+YL++DE HR+KN +  L +I+++   +NRLLLTGT
Sbjct:   272 TTNIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGT 331

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEE 374
             PLQNNL+ELW+LLNF+LP           WFN +E
Sbjct:   332 PLQNNLNELWSLLNFILPDIFHDLELFQQWFNFDE 366

 Score = 182 (69.1 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
 Identities = 33/65 (50%), Positives = 48/65 (73%)

Query:    16 TEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++  + ++    P  I GG+++DYQ+ GL W+I+L++NG+NGILADEMGLGKTLQ IS L
Sbjct:   155 SQNSSKITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFL 214

Query:    76 GPKID 80
                I+
Sbjct:   215 SHLIE 219

 Score = 126 (49.4 bits), Expect = 1.6e-60, Sum P(2) = 1.6e-60
 Identities = 22/46 (47%), Positives = 37/46 (80%)

Query:   380 SIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             ++I+ LH++LKPF+LRRLK +V K L PKKE  +++ ++K+Q++ Y
Sbjct:   396 TLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441

 Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 19/69 (27%), Positives = 29/69 (42%)

Query:    21 IVSFENSPFYIKGGEMR-DYQVRGLNWMISLYENGING---ILADEMGLGKTLQTISLLG 76
             I  F+N    I   EM     ++ ++++  L ENGING   ++     L      I    
Sbjct:   187 ITLFQNGLNGILADEMGLGKTLQCISFLSHLIENGINGPFLVVVPVSTLSNWYNEIRKFA 246

Query:    77 PKIDRFDYL 85
             PKI    Y+
Sbjct:   247 PKIKVTKYI 255


>UNIPROTKB|Q5AJ72 [details] [associations]
            symbol:CaO19.1720 "Putative uncharacterized protein"
            species:237561 "Candida albicans SC5314" [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
            RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
            GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
            Uniprot:Q5AJ72
        Length = 864

 Score = 524 (189.5 bits), Expect = 1.6e-60, Sum P(2) = 1.6e-60
 Identities = 99/215 (46%), Positives = 144/215 (66%)

Query:   161 TEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 220
             ++  + ++    P  I GG+++DYQ+ GL W+I+L++NG+NGILADEMGLGKTLQ IS L
Sbjct:   155 SQNSSKITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFL 214

Query:   221 GYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE 280
              ++     I GP +V+VP STL NW NE +K+ P ++    IG +  RN +  D++   E
Sbjct:   215 SHLIE-NGINGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDI--DLLQQQE 271

Query:   281 W-DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
               ++ +TSYE+ IR+     K NW+YL++DE HR+KN +  L +I+++   +NRLLLTGT
Sbjct:   272 TTNIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGT 331

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEE 374
             PLQNNL+ELW+LLNF+LP           WFN +E
Sbjct:   332 PLQNNLNELWSLLNFILPDIFHDLELFQQWFNFDE 366

 Score = 182 (69.1 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
 Identities = 33/65 (50%), Positives = 48/65 (73%)

Query:    16 TEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++  + ++    P  I GG+++DYQ+ GL W+I+L++NG+NGILADEMGLGKTLQ IS L
Sbjct:   155 SQNSSKITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFL 214

Query:    76 GPKID 80
                I+
Sbjct:   215 SHLIE 219

 Score = 126 (49.4 bits), Expect = 1.6e-60, Sum P(2) = 1.6e-60
 Identities = 22/46 (47%), Positives = 37/46 (80%)

Query:   380 SIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             ++I+ LH++LKPF+LRRLK +V K L PKKE  +++ ++K+Q++ Y
Sbjct:   396 TLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441

 Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 19/69 (27%), Positives = 29/69 (42%)

Query:    21 IVSFENSPFYIKGGEMR-DYQVRGLNWMISLYENGING---ILADEMGLGKTLQTISLLG 76
             I  F+N    I   EM     ++ ++++  L ENGING   ++     L      I    
Sbjct:   187 ITLFQNGLNGILADEMGLGKTLQCISFLSHLIENGINGPFLVVVPVSTLSNWYNEIRKFA 246

Query:    77 PKIDRFDYL 85
             PKI    Y+
Sbjct:   247 PKIKVTKYI 255


>SGD|S000001388 [details] [associations]
            symbol:STH1 "ATPase component of the RSC chromatin remodeling
            complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
            disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
            evidence=IMP] [GO:0007010 "cytoskeleton organization"
            evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
            evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
            [GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
            [GO:0006368 "transcription elongation from RNA polymerase II
            promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
            evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
            GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
            EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
            GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
            EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
            PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
            GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
            EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
            SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
            STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
            GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
            NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
            Uniprot:P32597
        Length = 1359

 Score = 628 (226.1 bits), Expect = 3.2e-60, P = 3.2e-60
 Identities = 127/272 (46%), Positives = 176/272 (64%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             +  P  + GG +++YQ+RGL WM+SLY N +NGILADEMGLGKT+Q+ISL+ Y+   +  
Sbjct:   459 DKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKD 518

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYE 289
              GP +VIVP ST+ NW  EF+KW P+L  I   G  + R+++   + + G +DV +T+YE
Sbjct:   519 IGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRV-GNFDVLLTTYE 577

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLS-EIVREFKTTNRLLLTGTPLQNNLHEL 348
               I+++ +  K +W +++IDE HR+KN +SKLS  I   ++T NRL+LTGTPLQNNL EL
Sbjct:   578 YIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPEL 637

Query:   349 WALLNFLLPXXXXXXXXXXXWFNTE----------EFMGDHS--IIERLHSVLKPFLLRR 396
             WALLNF+LP           WFNT           E   + +  II RLH VL+PFLLRR
Sbjct:   638 WALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRR 697

Query:   397 LKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             LK EVEK L  K E  +   LS +Q++ Y ++
Sbjct:   698 LKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQM 729

 Score = 179 (68.1 bits), Expect = 3.9e-10, P = 3.9e-10
 Identities = 31/51 (60%), Positives = 42/51 (82%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             +  P  + GG +++YQ+RGL WM+SLY N +NGILADEMGLGKT+Q+ISL+
Sbjct:   459 DKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLI 509


>RGD|2323132 [details] [associations]
            symbol:LOC100359912 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin a5-like" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
            GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
            Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
        Length = 760

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 111/148 (75%), Positives = 127/148 (85%)

Query:   281 WDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 340
             WDVC+TSYEM I+E+ VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP
Sbjct:     1 WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 60

Query:   341 LQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSE 400
             LQNNLHELW+LLNFLLP           WF+T   +GD  ++ERLH VL+PFLLRR+K++
Sbjct:    61 LQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDKKLVERLHMVLRPFLLRRIKAD 120

Query:   401 VEKRLKPKKELKVYVGLSKMQREWYTKV 428
             VEK L PKKE+K+YVGLSKMQREWYT++
Sbjct:   121 VEKSLPPKKEVKIYVGLSKMQREWYTRI 148


>DICTYBASE|DDB_G0271052 [details] [associations]
            symbol:snf2b "SNF2-related protein Snf2a"
            species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
            EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
            InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
            KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
            ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
            KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
        Length = 3247

 Score = 621 (223.7 bits), Expect = 7.9e-60, Sum P(2) = 7.9e-60
 Identities = 123/264 (46%), Positives = 169/264 (64%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P  ++GG+++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+   +   GP
Sbjct:  1703 PALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKNNGP 1762

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
              +V+VP STL NW  EF KW P ++ +   GD+ AR +   + + PG+++  +T+YE  I
Sbjct:  1763 FLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFIAPGQFNAVVTTYEYII 1822

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIV-REFKTTNRLLLTGTPLQNNLHELWAL 351
             +++    K  W YL++DE HR+KN  SKLS I+   + +  RLLLTGTPLQN+L ELWAL
Sbjct:  1823 KDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSSRYRLLLTGTPLQNSLPELWAL 1882

Query:   352 LNFLLPXXXXXXXXXXXWFNT------EEF-MGDHS---IIERLHSVLKPFLLRRLKSEV 401
             LNFLLP           WFN       E+  M +     II+RLH VL+PFLLRRLK EV
Sbjct:  1883 LNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKVLRPFLLRRLKKEV 1942

Query:   402 EKRLKPKKELKVYVGLSKMQREWY 425
             E +L  K E  +   +S  Q + Y
Sbjct:  1943 EAQLPDKVEKVLKCDMSAFQAKMY 1966

 Score = 176 (67.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
 Identities = 31/53 (58%), Positives = 44/53 (83%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKID 80
             P  ++GG+++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+   I+
Sbjct:  1703 PALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIE 1755

 Score = 45 (20.9 bits), Expect = 7.9e-60, Sum P(2) = 7.9e-60
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGK 164
             L KEK ++   +       +++D+ LL     EG+
Sbjct:  1397 LQKEKISIQEKEENEEAIRRQQDQLLLQQKEKEGE 1431

 Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
 Identities = 23/79 (29%), Positives = 31/79 (39%)

Query:   132 KEKKNVDPSDHRHRMTEQEE---DEELLANA-NTEGKTIVSFENSPFYIKGGEMRDYQVR 187
             KE ++ +  +HR R  E  E   D E   N  N E +      ++       E RDY   
Sbjct:  2997 KEHRSSNHKEHRERHRENREHRGDRENRENRENRENREHREHRDNRPNRDNREFRDYSSN 3056

Query:   188 GL-----NWMISLYENGIN 201
                    N MIS + N IN
Sbjct:  3057 SSGNNNNNNMISNFNN-IN 3074


>MGI|MGI:2444036 [details] [associations]
            symbol:Srcap "Snf2-related CREBBP activator protein"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            [GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
            Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
            EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
            ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
            OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
        Length = 936

 Score = 586 (211.3 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   594 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 647

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   648 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 707

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   708 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 767

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   768 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 827

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   828 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 861

 Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   594 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 647

Query:    74 LL 75
             LL
Sbjct:   648 LL 649

 Score = 51 (23.0 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE--LLANANTEGKTIVSFENSPFYIKGGEM 181
             K++ + D  D      E EEDEE  + A    EG+   + E S    + GE+
Sbjct:   371 KQRWHPDEDDEEFTANEDEEDEEDTIAAEEQLEGEVDHAMELSEL-AREGEL 421

 Score = 41 (19.5 bits), Expect = 3.6e-58, Sum P(2) = 3.6e-58
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query:   142 HRHRMTEQEEDEELLANANTEGK--TIVSFE 170
             ++ R    E+DEE  AN + E +  TI + E
Sbjct:   370 NKQRWHPDEDDEEFTANEDEEDEEDTIAAEE 400

 Score = 38 (18.4 bits), Expect = 7.4e-58, Sum P(2) = 7.4e-58
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query:     3 EQEEDEE--LLANANTEGKTIVSFENSPFYIKGGEM 36
             E EEDEE  + A    EG+   + E S    + GE+
Sbjct:   387 EDEEDEEDTIAAEEQLEGEVDHAMELSEL-AREGEL 421

 Score = 37 (18.1 bits), Expect = 9.5e-58, Sum P(2) = 9.5e-58
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query:     5 EEDEELLANANTEGK--TIVSFE 25
             E+DEE  AN + E +  TI + E
Sbjct:   378 EDDEEFTANEDEEDEEDTIAAEE 400


>CGD|CAL0003962 [details] [associations]
            symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
            "RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
            centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
            evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
            "cytoskeleton organization" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
            "G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
            "DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
            PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
            ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
            GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
            Uniprot:Q5AEM9
        Length = 1303

 Score = 608 (219.1 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
 Identities = 126/269 (46%), Positives = 175/269 (65%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P  + GG++++YQ++GL WM+SLY N +NGILADEMGLGKT+Q+ISL+ Y+   ++    
Sbjct:   493 PTILVGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTYLIEKKH-ENK 551

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
              ++IVP ST+ NW  EF+KW P+++ I   G Q  R ++  D+   G + V +T+YE  I
Sbjct:   552 FLIIVPLSTITNWTLEFEKWAPSIKVIVYKGSQQQRRSLQPDIRY-GNFQVLLTTYEYVI 610

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWAL 351
             RER +  KF++ +++IDE HR+KN +SKLS+ +R + KT NRL+LTGTPLQNNL ELWAL
Sbjct:   611 RERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNRLILTGTPLQNNLPELWAL 670

Query:   352 LNFLLPXXXXXXXXXXXWFNTE----------EFMGDHS--IIERLHSVLKPFLLRRLKS 399
             LNF+LP           WFNT           E   + S  +I RLH VL+PFLLRRLK 
Sbjct:   671 LNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHKVLRPFLLRRLKK 730

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             +VEK L  K E  +   LS +Q   Y ++
Sbjct:   731 DVEKDLPDKVEKVLKCNLSGLQYVLYQQM 759

 Score = 176 (67.0 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
 Identities = 31/54 (57%), Positives = 45/54 (83%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             P  + GG++++YQ++GL WM+SLY N +NGILADEMGLGKT+Q+ISL+   I++
Sbjct:   493 PTILVGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTYLIEK 546

 Score = 39 (18.8 bits), Expect = 3.2e-59, Sum P(2) = 3.2e-59
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query:   144 HRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGL 189
             H+ TE+EE ++L   A    + + S +   +     + +D+++  L
Sbjct:   378 HQTTEKEESKKLERTAKQRLQALRSNDEEAYLKLLDKTKDHRITHL 423

 Score = 38 (18.4 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
 Identities = 8/34 (23%), Positives = 18/34 (52%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELLANANTEGKT 165
             +E  ++D  +    +   EE++ L A+ + E K+
Sbjct:  1001 EENDSLDDDELNEILARSEEEKVLFASMDEERKS 1034


>UNIPROTKB|D4A4J2 [details] [associations]
            symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
            SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
            Uniprot:D4A4J2
        Length = 1506

 Score = 588 (212.0 bits), Expect = 7.5e-59, Sum P(3) = 7.5e-59
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   729 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 788

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   789 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 847

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   848 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 907

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   908 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 967

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   968 KVEYVIKCDMSALQKILY 985

 Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   729 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 770

 Score = 43 (20.2 bits), Expect = 7.5e-59, Sum P(3) = 7.5e-59
 Identities = 7/31 (22%), Positives = 17/31 (54%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELLANANTE 162
             + + + +  D     + QE +E++L + N+E
Sbjct:   644 ESESDYEEEDEEEESSRQETEEKILLDPNSE 674

 Score = 40 (19.1 bits), Expect = 7.5e-59, Sum P(3) = 7.5e-59
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   524 LIDQKKDRRLAYLLQQTDEYVANLTN 549


>MGI|MGI:99603 [details] [associations]
            symbol:Smarca2 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0006325 "chromatin organization"
            evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
            evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0035887 "aortic smooth muscle cell differentiation"
            evidence=IMP] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
            evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
            "WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
            GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
            GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
            GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
            GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
            ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
            EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
            ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
            PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
            KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
            NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
        Length = 1577

 Score = 588 (212.0 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   727 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 786

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   787 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 845

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   846 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 905

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   906 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 965

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   966 KVEYVIKCDMSALQKILY 983

 Score = 163 (62.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   727 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 768

 Score = 43 (20.2 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
 Identities = 7/31 (22%), Positives = 17/31 (54%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELLANANTE 162
             + + + +  D     + QE +E++L + N+E
Sbjct:   642 ESESDYEEEDEEEESSRQETEEKILLDPNSE 672

 Score = 40 (19.1 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   522 LIDQKKDRRLAYLLQQTDEYVANLTN 547

 Score = 37 (18.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
 Identities = 10/37 (27%), Positives = 22/37 (59%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ + S+      E+E+DEE    + +E K++
Sbjct:  1493 IAKEEESEEESNEE----EEEDDEE---ESESEAKSV 1522


>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
            symbol:smarca2 "SWI/SNF related, matrix
            associated, actin dependent regulator of chromatin, subfamily a,
            member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
            HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
            UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
            GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
            ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
        Length = 1568

 Score = 595 (214.5 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
 Identities = 119/267 (44%), Positives = 166/267 (62%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             + S F I G  ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI L+ Y+   + +
Sbjct:   716 KQSTFLING-TLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMELKRL 774

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYE 289
              GP+++IVP STL NW+ E  KW P++  I   G    R +++   +  G+++V IT+YE
Sbjct:   775 NGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSLVPQ-LRSGKFNVLITTYE 833

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHEL 348
               I+++ +  K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L EL
Sbjct:   834 YIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPEL 893

Query:   349 WALLNFLLPXXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLK 398
             WALLNFLLP           WFN    M G+           II RLH VL+PFLLRRLK
Sbjct:   894 WALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLK 953

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWY 425
              EVE +L  K E  +   +S +Q+  Y
Sbjct:   954 KEVESQLPEKVEYVIKCDMSAIQKVLY 980

 Score = 169 (64.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             + S F I G  ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI L+
Sbjct:   716 KQSTFLING-TLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLI 765

 Score = 51 (23.0 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
 Identities = 8/20 (40%), Positives = 16/20 (80%)

Query:     3 EQEEDEELLANANTEGKTIV 22
             E+E+DEE+++ A +E K ++
Sbjct:   645 EEEDDEEVVSRAESEEKKVI 664

 Score = 51 (23.0 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
 Identities = 8/20 (40%), Positives = 16/20 (80%)

Query:   148 EQEEDEELLANANTEGKTIV 167
             E+E+DEE+++ A +E K ++
Sbjct:   645 EEEDDEEVVSRAESEEKKVI 664


>UNIPROTKB|E9PTG1 [details] [associations]
            symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
            norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0016514
            "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
            cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
            GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
            GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
            Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
        Length = 1597

 Score = 588 (212.0 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   729 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 788

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   789 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 847

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   848 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 907

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   908 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 967

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   968 KVEYVIKCDMSALQKILY 985

 Score = 163 (62.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   729 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 770

 Score = 43 (20.2 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
 Identities = 7/31 (22%), Positives = 17/31 (54%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELLANANTE 162
             + + + +  D     + QE +E++L + N+E
Sbjct:   644 ESESDYEEEDEEEESSRQETEEKILLDPNSE 674

 Score = 40 (19.1 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   524 LIDQKKDRRLAYLLQQTDEYVANLTN 549

 Score = 39 (18.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ + S+      E+EEDEE    +  E K++
Sbjct:  1513 IAKEEESEEESNEE----EEEEDEE---ESEAEAKSV 1542


>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
            symbol:PFB0730w "DNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
            activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
            PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
            EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
            EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
        Length = 1997

 Score = 616 (221.9 bits), Expect = 1.4e-58, P = 1.4e-58
 Identities = 121/268 (45%), Positives = 175/268 (65%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRN-IAG 231
             P  + GGE+  YQ+ GL W++SLY N ++GILADEMGLGKT+QTISL  Y+K ++N I  
Sbjct:   876 PSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKNNINV 935

Query:   232 PHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMC 291
              +++IVP STL NW++EF +WCP+L  I   G++  R  + +  ++   +D+CIT++++ 
Sbjct:   936 KNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKK-LLEQTFDICITTFDLV 994

Query:   292 IRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWAL 351
             I+E+    K +W Y+V+DE HR+KN KS+    + EFK+  R+LLTGTPLQNNL ELW+L
Sbjct:   995 IKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTPLQNNLSELWSL 1054

Query:   352 LNFLLPXXXXXXXXXXXWF----NTEEFMGDHS-------IIERLHSVLKPFLLRRLKSE 400
             LNFLLP           WF    + E+ + +H        II RLHSVL PF+LRR+K +
Sbjct:  1055 LNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLPFMLRRVKKD 1114

Query:   401 VEKRLKPKKELKVYVGLSKMQREWYTKV 428
             V K L  K E  +++ LS  Q+  Y ++
Sbjct:  1115 VLKSLPKKYEYNIHIELSLYQKILYKQI 1142

 Score = 167 (63.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 30/47 (63%), Positives = 38/47 (80%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISL 74
             P  + GGE+  YQ+ GL W++SLY N ++GILADEMGLGKT+QTISL
Sbjct:   876 PSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISL 922

 Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query:   130 LTKEKKNVDPSD----HRHRMTEQEEDEE 154
             + KEKK  +  D     R R  E+++DE+
Sbjct:  1585 IKKEKKEEEGEDDEENQRDRNKEEDQDED 1613


>UNIPROTKB|O96239 [details] [associations]
            symbol:PFB0730w "DEAD/DEAH box helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
            activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
            [GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
            GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
            RefSeq:XP_001349665.1 ProteinModelPortal:O96239
            EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
            EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
        Length = 1997

 Score = 616 (221.9 bits), Expect = 1.4e-58, P = 1.4e-58
 Identities = 121/268 (45%), Positives = 175/268 (65%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRN-IAG 231
             P  + GGE+  YQ+ GL W++SLY N ++GILADEMGLGKT+QTISL  Y+K ++N I  
Sbjct:   876 PSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKNNINV 935

Query:   232 PHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMC 291
              +++IVP STL NW++EF +WCP+L  I   G++  R  + +  ++   +D+CIT++++ 
Sbjct:   936 KNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKK-LLEQTFDICITTFDLV 994

Query:   292 IRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWAL 351
             I+E+    K +W Y+V+DE HR+KN KS+    + EFK+  R+LLTGTPLQNNL ELW+L
Sbjct:   995 IKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTPLQNNLSELWSL 1054

Query:   352 LNFLLPXXXXXXXXXXXWF----NTEEFMGDHS-------IIERLHSVLKPFLLRRLKSE 400
             LNFLLP           WF    + E+ + +H        II RLHSVL PF+LRR+K +
Sbjct:  1055 LNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLPFMLRRVKKD 1114

Query:   401 VEKRLKPKKELKVYVGLSKMQREWYTKV 428
             V K L  K E  +++ LS  Q+  Y ++
Sbjct:  1115 VLKSLPKKYEYNIHIELSLYQKILYKQI 1142

 Score = 167 (63.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 30/47 (63%), Positives = 38/47 (80%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISL 74
             P  + GGE+  YQ+ GL W++SLY N ++GILADEMGLGKT+QTISL
Sbjct:   876 PSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISL 922

 Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query:   130 LTKEKKNVDPSD----HRHRMTEQEEDEE 154
             + KEKK  +  D     R R  E+++DE+
Sbjct:  1585 IKKEKKEEEGEDDEENQRDRNKEEDQDED 1613


>UNIPROTKB|A5PKK5 [details] [associations]
            symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
            [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=IEA] [GO:0030308 "negative regulation of
            cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IEA] [GO:0000790
            "nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
            GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
            GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
            OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
            EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
            RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
            Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
            InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
        Length = 1554

 Score = 588 (212.0 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   704 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 763

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   764 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 822

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   823 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 882

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   883 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 942

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   943 KVEYVIKCDMSALQKILY 960

 Score = 163 (62.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   704 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 745

 Score = 44 (20.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ D S+      E+EEDEE    + +E K++
Sbjct:  1470 IAKEEESEDESNEE----EEEEDEE---ESESEAKSV 1499

 Score = 41 (19.5 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTE 162
             +  D     + QE +E++L + N+E
Sbjct:   625 EEEDEEEESSRQETEEKILLDPNSE 649

 Score = 40 (19.1 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   499 LIDQKKDRRLAYLLQQTDEYVANLTN 524


>UNIPROTKB|F1SJG5 [details] [associations]
            symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=IEA] [GO:0030308 "negative regulation of
            cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IEA] [GO:0000790
            "nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
            GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
            GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
            EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
            Uniprot:F1SJG5
        Length = 1556

 Score = 588 (212.0 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   706 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 765

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   766 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 824

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   825 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 884

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   885 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 944

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   945 KVEYVIKCDMSALQKILY 962

 Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   706 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 747

 Score = 44 (20.5 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ D S+      E+EEDEE    + +E K++
Sbjct:  1472 IAKEEESEDESNEE----EEEEDEE---ESESEAKSV 1501

 Score = 41 (19.5 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTE 162
             +  D     + QE +E++L + N+E
Sbjct:   627 EEEDEEEESSRQETEEKILLDPNSE 651

 Score = 40 (19.1 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   501 LIDQKKDRRLAYLLQQTDEYVANLTN 526


>UNIPROTKB|P51531 [details] [associations]
            symbol:SMARCA2 "Probable global transcription activator
            SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
            smooth muscle cell differentiation" evidence=IEA] [GO:0016514
            "SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
            evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
            polymerase II transcription coactivator activity" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IDA] [GO:0003713
            "transcription coactivator activity" evidence=TAS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
            complex" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
            chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
            growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
            evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=TAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
            filament cytoskeleton" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
            GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
            GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
            GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
            Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
            IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
            RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
            PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
            IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
            DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
            Ensembl:ENST00000349721 Ensembl:ENST00000357248
            Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
            KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
            GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
            MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
            HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
            OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
            GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
            Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
            GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
        Length = 1590

 Score = 588 (212.0 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   722 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 781

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   782 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 840

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   841 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 900

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   901 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 960

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   961 KVEYVIKCDMSALQKILY 978

 Score = 163 (62.4 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   722 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 763

 Score = 44 (20.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ D S+      E+EEDEE    + +E K++
Sbjct:  1506 IAKEEESEDESNEE----EEEEDEE---ESESEAKSV 1535

 Score = 41 (19.5 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTE 162
             +  D     + QE +E++L + N+E
Sbjct:   643 EEEDEEEESSRQETEEKILLDPNSE 667

 Score = 40 (19.1 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   517 LIDQKKDRRLAYLLQQTDEYVANLTN 542


>TAIR|locus:2150270 [details] [associations]
            symbol:CHR23 "chromatin remodeling 23" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
            "sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
            evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
            "protein ubiquitination" evidence=RCA] [GO:0016571 "histone
            methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
            evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
            evidence=RCA] [GO:0033044 "regulation of chromosome organization"
            evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
            OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
            ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
            EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
            PhylomeDB:F4K128 Uniprot:F4K128
        Length = 1064

 Score = 608 (219.1 bits), Expect = 2.0e-58, P = 2.0e-58
 Identities = 125/301 (41%), Positives = 183/301 (60%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYE 197
             D +D  + + E E    L  ++  E  T       P  ++GGE+R YQ+ GL WM+SLY 
Sbjct:   348 DNNDDSNDLLEGERQFNLAIHSIQEKVT-----KQPSLLQGGELRSYQLEGLQWMVSLYN 402

Query:   198 NGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLR 257
             N  NGILADEMGLGKT+QTI+L+ Y+   +++ GPH+++ PK+ L NW NEF  W P++ 
Sbjct:   403 NDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPKAVLPNWENEFALWAPSIS 462

Query:   258 AICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNE 317
             A    G ++ R   IR  +  G+++V IT Y++ +R++   KK +W Y+++DE HR+KN 
Sbjct:   463 AFLYDGSKEKRTE-IRARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNH 521

Query:   318 KSKLSEIVRE-FKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNT---- 372
             +  L++ +   ++   RLLLTGTP+QN+L ELW+LLNFLLP           WFNT    
Sbjct:   522 ECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAE 581

Query:   373 --EEFMGDHS---IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTK 427
                  + D     II RLH V++PFLLRR KSEVEK L  K ++ +   +S  Q+ +Y +
Sbjct:   582 CGSASLTDEEELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQ 641

Query:   428 V 428
             V
Sbjct:   642 V 642

 Score = 182 (69.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
 Identities = 33/56 (58%), Positives = 43/56 (76%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDRFD 83
             P  ++GGE+R YQ+ GL WM+SLY N  NGILADEMGLGKT+QTI+L+   ++  D
Sbjct:   378 PSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKD 433

 Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query:   395 RRLKSEVEKRLKPKKELKVYVGLSKMQRE 423
             RR K   + RL  +KE+  +   S+ Q +
Sbjct:   904 RRKKENYKTRLMEEKEVPEWAYTSETQED 932


>UNIPROTKB|E1C2F7 [details] [associations]
            symbol:E1C2F7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IEA] [GO:0008285
            "negative regulation of cell proliferation" evidence=IEA]
            [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
            regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
            muscle cell differentiation" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
            "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
            GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
            GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
            EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
            EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
            Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
        Length = 1546

 Score = 589 (212.4 bits), Expect = 2.9e-58, Sum P(3) = 2.9e-58
 Identities = 123/303 (40%), Positives = 178/303 (58%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD            +    +A+A TE       E     +  G ++ YQ++GL WM+
Sbjct:   656 KQDVDDEYSMQYSARGSQSYYTVAHAITE-----RVEKQSSLLINGTLKHYQLQGLEWMV 710

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
             SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP STL NW  EF KW 
Sbjct:   711 SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWA 770

Query:   254 PTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHR 313
             P++  I   G    R +++   +  G+++V +T+YE  I+++ +  K  W+Y+++DE HR
Sbjct:   771 PSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR 829

Query:   314 IKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNT 372
             +KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP           WFN 
Sbjct:   830 MKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA 889

Query:   373 EEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                M G+           II RLH VL+PFLLRRLK EVE +L  K E  +   +S +Q+
Sbjct:   890 PFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQK 949

Query:   423 EWY 425
               Y
Sbjct:   950 ILY 952

 Score = 163 (62.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   696 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 737

 Score = 40 (19.1 bits), Expect = 2.9e-58, Sum P(3) = 2.9e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   490 LIDQKKDRRLAYLLQQTDEYVANLTN 515

 Score = 37 (18.1 bits), Expect = 2.9e-58, Sum P(3) = 2.9e-58
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTE 162
             +  D     +  E DE++L + N+E
Sbjct:   617 EEEDDEEESSRLEADEKILLDPNSE 641

 Score = 37 (18.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ D S+      E E+DEE    + +E K++
Sbjct:  1462 IAKEEESEDESND----DEDEDDEE---ESESESKSV 1491


>WB|WBGene00007027 [details] [associations]
            symbol:ssl-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
            GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
            GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
            EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
            RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
            UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
            MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
            GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
            WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
            WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
            ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
        Length = 2395

 Score = 614 (221.2 bits), Expect = 3.0e-58, P = 3.0e-58
 Identities = 134/302 (44%), Positives = 182/302 (60%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENS---PFYIKGGEMRDYQVRGLN 190
             K N   SD R +      +E L      +G T+ + +     PF I+G ++R+YQ+ GL+
Sbjct:   511 KLNSQDSDERQQELANIAEEAL--KFQPKGYTLETTQVKTPVPFLIRG-QLREYQMVGLD 567

Query:   191 WMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFK 250
             WM++LYE  +NGILADEMGLGKT+QTISLL +M    +I GPH+++VP S +LNW  EFK
Sbjct:   568 WMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPTSVILNWEMEFK 627

Query:   251 KWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDE 310
             KWCP L+ +   G    R    +  M P  + VCITSY+   ++   FK+  W+YL++DE
Sbjct:   628 KWCPALKILTYFGTAKERAEKRKGWMKPNCFHVCITSYKTVTQDIRAFKQRAWQYLILDE 687

Query:   311 AHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWF 370
             A  IKN KS+  + +   +   RLLLTGTPLQN+L ELW+L++FL+P           WF
Sbjct:   688 AQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWF 747

Query:   371 N---TEEFMGDHS----IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQRE 423
             +   T    G+      +I RLH VL+PF+LRRLK EVEK+L  K E  V   LSK QR 
Sbjct:   748 SNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRY 807

Query:   424 WY 425
              Y
Sbjct:   808 LY 809

 Score = 179 (68.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 33/48 (68%), Positives = 43/48 (89%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             PF I+G ++R+YQ+ GL+WM++LYE  +NGILADEMGLGKT+QTISLL
Sbjct:   551 PFLIRG-QLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLL 597

 Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query:   388 VLKPFLLRRLKSEVEKRL 405
             V+ PF++ +L+ +V  RL
Sbjct:   852 VVAPFVVEKLQLDVPARL 869


>UNIPROTKB|E2RKP4 [details] [associations]
            symbol:SMARCA2 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
            [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
            complex" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0035887 "aortic smooth muscle cell differentiation"
            evidence=IEA] [GO:0030308 "negative regulation of cell growth"
            evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
            GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
            GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
            GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
            EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
            Uniprot:E2RKP4
        Length = 1556

 Score = 588 (212.0 bits), Expect = 3.1e-58, Sum P(3) = 3.1e-58
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   706 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 765

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   766 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 824

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   825 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 884

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   885 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 944

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   945 KVEYVIKCDMSALQKILY 962

 Score = 163 (62.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   706 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 747

 Score = 44 (20.5 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ D S+      E+EEDEE    + +E K++
Sbjct:  1472 IAKEEESEDESNEE----EEEEDEE---ESESEAKSV 1501

 Score = 40 (19.1 bits), Expect = 3.1e-58, Sum P(3) = 3.1e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   501 LIDQKKDRRLAYLLQQTDEYVANLTN 526

 Score = 38 (18.4 bits), Expect = 3.1e-58, Sum P(3) = 3.1e-58
 Identities = 6/25 (24%), Positives = 14/25 (56%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTE 162
             +  D     + Q+ +E++L + N+E
Sbjct:   627 EEEDEEEESSRQDTEEKILLDPNSE 651

 Score = 37 (18.1 bits), Expect = 3.9e-58, Sum P(3) = 3.9e-58
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query:   148 EQEEDEELLANANTEGKTIV 167
             E+E++EE  +  +TE K ++
Sbjct:   627 EEEDEEEESSRQDTEEKILL 646

 Score = 37 (18.1 bits), Expect = 1.7e-56, Sum P(2) = 1.7e-56
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query:     3 EQEEDEELLANANTEGKTIV 22
             E+E++EE  +  +TE K ++
Sbjct:   627 EEEDEEEESSRQDTEEKILL 646


>UNIPROTKB|J9P5P2 [details] [associations]
            symbol:SMARCA2 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
            Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
            Uniprot:J9P5P2
        Length = 1574

 Score = 588 (212.0 bits), Expect = 3.3e-58, Sum P(3) = 3.3e-58
 Identities = 115/258 (44%), Positives = 164/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   706 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 765

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  I   G    R +++   +  G+++V +T+YE  I+++ + 
Sbjct:   766 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHIL 824

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   825 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 884

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   885 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 944

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   945 KVEYVIKCDMSALQKILY 962

 Score = 163 (62.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
 Identities = 28/42 (66%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   706 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI 747

 Score = 44 (20.5 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ D S+      E+EEDEE    + +E K++
Sbjct:  1490 IAKEEESEDESNEE----EEEEDEE---ESESEAKSV 1519

 Score = 40 (19.1 bits), Expect = 3.3e-58, Sum P(3) = 3.3e-58
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   501 LIDQKKDRRLAYLLQQTDEYVANLTN 526

 Score = 38 (18.4 bits), Expect = 3.3e-58, Sum P(3) = 3.3e-58
 Identities = 6/25 (24%), Positives = 14/25 (56%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTE 162
             +  D     + Q+ +E++L + N+E
Sbjct:   627 EEEDEEEESSRQDTEEKILLDPNSE 651

 Score = 37 (18.1 bits), Expect = 4.2e-58, Sum P(3) = 4.2e-58
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query:   148 EQEEDEELLANANTEGKTIV 167
             E+E++EE  +  +TE K ++
Sbjct:   627 EEEDEEEESSRQDTEEKILL 646

 Score = 37 (18.1 bits), Expect = 1.7e-56, Sum P(2) = 1.7e-56
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query:     3 EQEEDEELLANANTEGKTIV 22
             E+E++EE  +  +TE K ++
Sbjct:   627 EEEDEEEESSRQDTEEKILL 646


>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
            symbol:hells "helicase, lymphoid-specific"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
            GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
            EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
            UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
            GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
            ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
        Length = 853

 Score = 583 (210.3 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
 Identities = 126/313 (40%), Positives = 184/313 (58%)

Query:   133 EKKNVDPSDHRHRMTE--QEEDEELLANANT-EGKTIVSFENSPFYIKGGEMRDYQVRGL 189
             EK +   SD + R++E  +E  +++L    T  G+ + +    P    GG MR YQV G+
Sbjct:   184 EKLSDTNSDIKGRLSETLRENSKQMLDPERTVNGQPVPA--QQPQLFTGGVMRWYQVEGI 241

Query:   190 NWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEF 249
              W+  L+ENGINGILADEMGLGKT+Q I+ +  M   + + GP +V+ P STL NW++EF
Sbjct:   242 EWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVE-KKVLGPFLVVAPLSTLPNWISEF 300

Query:   250 KKWCPTLRAICLIGDQDARNAMIRDVMM-PGEWDVC---ITSYEMCIRERGVFKKFNWRY 305
             K++ P +  +   G Q  R  +++ +    G   +C   +TS+E+ +R+R   ++F+W Y
Sbjct:   301 KRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPVVVTSFEIAMRDRKFLQRFHWNY 360

Query:   306 LVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXX 365
             L++DE HRIKN   +L + ++   T N+LLLTGTPLQNNL ELW+LLNFLLP        
Sbjct:   361 LIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKS 420

Query:   366 XXXWFNTEEFMGD----------HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYV 415
                WF+      D           +I+  LH +L PFLLRRLKS+V   + PKKE+ VY 
Sbjct:   421 FESWFDISTITSDAENIVANEREQNILHMLHLILTPFLLRRLKSDVTLEVPPKKEIVVYA 480

Query:   416 GLSKMQREWYTKV 428
              L+  Q  +Y  +
Sbjct:   481 PLTNKQEAFYMAI 493

 Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 35/81 (43%), Positives = 51/81 (62%)

Query:     2 TEQEEDEELLANANT-EGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILA 60
             T +E  +++L    T  G+ + +    P    GG MR YQV G+ W+  L+ENGINGILA
Sbjct:   200 TLRENSKQMLDPERTVNGQPVPA--QQPQLFTGGVMRWYQVEGIEWLRMLWENGINGILA 257

Query:    61 DEMGLGKTLQTISLLGPKIDR 81
             DEMGLGKT+Q I+ +   +++
Sbjct:   258 DEMGLGKTIQCIAHIAMMVEK 278

 Score = 37 (18.1 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
 Identities = 6/19 (31%), Positives = 13/19 (68%)

Query:    78 KIDRFDYLLKQTEIFSHFM 96
             +  R  +LL+++ I+S F+
Sbjct:    83 RFKRLQHLLEKSNIYSKFL 101


>TAIR|locus:2173644 [details] [associations]
            symbol:CHR1 "chromatin remodeling 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
            "regulation of gene expression by genetic imprinting" evidence=IMP]
            [GO:0044030 "regulation of DNA methylation" evidence=IMP]
            [GO:0051574 "positive regulation of histone H3-K9 methylation"
            evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
            histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
            evidence=IMP] [GO:0009294 "DNA mediated transformation"
            evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
            evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
            [GO:0006346 "methylation-dependent chromatin silencing"
            evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
            [GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
            phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
            small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
            evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
            EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
            GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
            EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
            RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
            SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
            EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
            TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
            PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
            GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
        Length = 764

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 129/365 (35%), Positives = 208/365 (56%)

Query:    81 RFDYLLKQTEIFSHFMTNQ----GVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKN 136
             + D LL QT+++S F+  +     +                           + TK K+ 
Sbjct:   102 KLDELLTQTQLYSEFLLEKMEDITINGIESESQKAEPEKTGRGRKRKAASQYNNTKAKRA 161

Query:   137 VDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENS--PFYIKGGEMRDYQVRGLNWMIS 194
             V        ++  +ED E + +  TE +T++  +N   P  + GG+++ YQ++G+ W+IS
Sbjct:   162 VAAM-----ISRSKEDGETINSDLTEEETVIKLQNELCPL-LTGGQLKSYQLKGVKWLIS 215

Query:   195 LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCP 254
             L++NG+NGILAD+MGLGKT+QTI  L ++K    + GP++VI P STL NW NE  ++ P
Sbjct:   216 LWQNGLNGILADQMGLGKTIQTIGFLSHLKG-NGLDGPYLVIAPLSTLSNWFNEIARFTP 274

Query:   255 TLRAICLIGDQDARNAMIRDVM---MPGEWDVCITSYEMCIRE-RGVFKKFNWRYLVIDE 310
             ++ AI   GD++ R+ + R  M   +  ++ + ITSYE+ + + + + + + W+Y+VIDE
Sbjct:   275 SINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVVIDE 334

Query:   311 AHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWF 370
              HR+KN K KL   ++  K  N+LLLTGTPLQNNL ELW+LLNF+LP           WF
Sbjct:   335 GHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWF 394

Query:   371 N-----------TEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSK 419
             +            EE      ++ +LH +L+PF+LRR+K +VE  L  KKE+ +Y  ++ 
Sbjct:   395 DFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTD 454

Query:   420 MQREW 424
              Q+++
Sbjct:   455 HQKKF 459

 Score = 194 (73.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 35/77 (45%), Positives = 57/77 (74%)

Query:     1 MTEQEEDEELLANANTEGKTIVSFENS--PFYIKGGEMRDYQVRGLNWMISLYENGINGI 58
             ++  +ED E + +  TE +T++  +N   P  + GG+++ YQ++G+ W+ISL++NG+NGI
Sbjct:   166 ISRSKEDGETINSDLTEEETVIKLQNELCPL-LTGGQLKSYQLKGVKWLISLWQNGLNGI 224

Query:    59 LADEMGLGKTLQTISLL 75
             LAD+MGLGKT+QTI  L
Sbjct:   225 LADQMGLGKTIQTIGFL 241


>UNIPROTKB|F1S594 [details] [associations]
            symbol:LOC100622433 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
            GeneTree:ENSGT00550000074659 EMBL:FP102365
            Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
        Length = 866

 Score = 597 (215.2 bits), Expect = 6.8e-58, P = 6.8e-58
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:     4 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 63

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:    64 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 122

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   123 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 182

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   183 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 242

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   243 KVEYVIKCDMSALQRVLY 260

 Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:     4 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 45


>ASPGD|ASPL0000041040 [details] [associations]
            symbol:AN9077 species:162425 "Emericella nidulans"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
            complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
            GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
            RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
            HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
        Length = 1698

 Score = 504 (182.5 bits), Expect = 7.3e-58, Sum P(3) = 7.3e-58
 Identities = 92/179 (51%), Positives = 127/179 (70%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G +R+YQ  GL+W+  LY N INGILADEMGLGKT+QTI+LL ++     + GPH+V+VP
Sbjct:   823 GTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPHLVVVP 882

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              S +LNW  EFKKWCP  + +   G+Q+ R    R  M    W+V ITSY++ ++++ V 
Sbjct:   883 TSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRRGWMDDNSWNVLITSYQLVLQDQQVL 942

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
             K+ +W Y+++DEAH IKN +S+  + +  F+T  RLLLTGTPLQNNL ELW+LL FL+P
Sbjct:   943 KRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLTELWSLLFFLMP 1001

 Score = 153 (58.9 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
 Identities = 29/42 (69%), Positives = 35/42 (83%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G +R+YQ  GL+W+  LY N INGILADEMGLGKT+QTI+LL
Sbjct:   823 GTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALL 864

 Score = 121 (47.7 bits), Expect = 7.3e-58, Sum P(3) = 7.3e-58
 Identities = 26/54 (48%), Positives = 38/54 (70%)

Query:   374 EFMGDHS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             E M D +  ++ +LH+VL+P++LRRLK++VEK++  K E  VY  LSK QR  Y
Sbjct:  1035 ETMDDEAKQVVTKLHTVLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLY 1088

 Score = 41 (19.5 bits), Expect = 7.3e-58, Sum P(3) = 7.3e-58
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query:     3 EQEEDEELLANANTEGKTIVSFENSP 28
             E  ED + +A  NT G T      SP
Sbjct:   536 EDSEDSDDIAADNTPGDTSGGVNRSP 561

 Score = 41 (19.5 bits), Expect = 7.3e-58, Sum P(3) = 7.3e-58
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query:   148 EQEEDEELLANANTEGKTIVSFENSP 173
             E  ED + +A  NT G T      SP
Sbjct:   536 EDSEDSDDIAADNTPGDTSGGVNRSP 561


>ZFIN|ZDB-GENE-030605-1 [details] [associations]
            symbol:smarca4 "SWI/SNF related, matrix associated,
            actin dependent regulator of chromatin, subfamily a, member 4"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
            retina development" evidence=IMP] [GO:0007417 "central nervous
            system development" evidence=IMP] [GO:0014032 "neural crest cell
            development" evidence=IMP] [GO:0060059 "embryonic retina
            morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
            layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
            evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
            [GO:0060973 "cell migration involved in heart development"
            evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
            "cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
            "embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
            "activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
            GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
            KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
            HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
            EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
            RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
            Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
            KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
            GO:GO:0021634 Uniprot:Q7ZSY3
        Length = 1627

 Score = 605 (218.0 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 118/267 (44%), Positives = 168/267 (62%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E     +  G+++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ +
Sbjct:   755 EKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEFKRL 814

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYE 289
              GP ++IVP STL NW+ EF KW P++  +   G   AR A +  ++  G+++V +T+YE
Sbjct:   815 NGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFL-PILRSGKFNVLVTTYE 873

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHEL 348
               I+++ V  K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L EL
Sbjct:   874 YIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPEL 933

Query:   349 WALLNFLLPXXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLK 398
             WALLNFLLP           WFN    M G+           II RLH VL+PFLLRRLK
Sbjct:   934 WALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLK 993

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWY 425
              EVE +L  K E  +   +S +QR  Y
Sbjct:   994 KEVEAQLPEKVEYVIKCDMSALQRVLY 1020

 Score = 168 (64.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 28/51 (54%), Positives = 40/51 (78%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E     +  G+++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   755 EKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 805

 Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 6/22 (27%), Positives = 14/22 (63%)

Query:   145 RMTEQEEDEELLANANTEGKTI 166
             R+T +EE+E++    + + K +
Sbjct:  1335 RLTCEEEEEKMFGRGSRQRKEV 1356


>UNIPROTKB|K7GT64 [details] [associations]
            symbol:LOC100622433 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
            Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
        Length = 980

 Score = 597 (215.2 bits), Expect = 2.1e-57, P = 2.1e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:    85 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 144

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   145 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 203

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   204 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 263

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   264 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 323

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   324 KVEYVIKCDMSALQRVLY 341

 Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:    85 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 126


>FB|FBgn0000212 [details] [associations]
            symbol:brm "brahma" species:7227 "Drosophila melanogaster"
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
            [GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
            "chromatin-mediated maintenance of transcription" evidence=NAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
            complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
            [GO:0045749 "negative regulation of S phase of mitotic cell cycle"
            evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0007474 "imaginal disc-derived wing vein specification"
            evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
            [GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
            "dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
            engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
            [GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
            [GO:0008586 "imaginal disc-derived wing vein morphogenesis"
            evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
            morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
            epidermal growth factor receptor signaling pathway" evidence=IMP]
            [GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
            "neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
            acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
            GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
            GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
            GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
            EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
            RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
            UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
            IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
            EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
            KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
            GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
            OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
            NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
            GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 Uniprot:P25439
        Length = 1638

 Score = 597 (215.2 bits), Expect = 2.2e-57, Sum P(2) = 2.2e-57
 Identities = 122/286 (42%), Positives = 178/286 (62%)

Query:   151 EDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGL 210
             E++   + A+T  + +V  E +   + G  +++YQ++GL W++SLY N +NGILADEMGL
Sbjct:   746 EEQTYYSIAHTIHEKVV--EQASIMVNG-TLKEYQIKGLEWLVSLYNNNLNGILADEMGL 802

Query:   211 GKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA 270
             GKT+QTISL+ Y+   + + GP+++IVP STL NW+ EF+KW P +  +   G    R  
Sbjct:   803 GKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRR- 861

Query:   271 MIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFK 329
             ++++ M   +++V +T+YE  I+++ V  K  W+Y++IDE HR+KN   KL++++   + 
Sbjct:   862 LLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYI 921

Query:   330 TTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTE--------EFMGDHSI 381
                RLLLTGTPLQN L ELWALLNFLLP           WFN          E   + +I
Sbjct:   922 APYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI 981

Query:   382 --IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
               I RLH VL+PFLLRRLK EVE +L  K E  +   +S +QR  Y
Sbjct:   982 LIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLY 1027

 Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 35/76 (46%), Positives = 54/76 (71%)

Query:     6 EDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGL 65
             E++   + A+T  + +V  E +   + G  +++YQ++GL W++SLY N +NGILADEMGL
Sbjct:   746 EEQTYYSIAHTIHEKVV--EQASIMVNG-TLKEYQIKGLEWLVSLYNNNLNGILADEMGL 802

Query:    66 GKTLQTISLLGPKIDR 81
             GKT+QTISL+   +DR
Sbjct:   803 GKTIQTISLVTYLMDR 818

 Score = 37 (18.1 bits), Expect = 2.2e-57, Sum P(2) = 2.2e-57
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYI 176
             KE++ ++    R  M E EE    L +   + +       +  YI
Sbjct:   558 KEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI 602


>CGD|CAL0005444 [details] [associations]
            symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
            "SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
            evidence=IMP] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
            transcription factor binding" evidence=IEA] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
            binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
            [GO:0044182 "filamentous growth of a population of unicellular
            organisms" evidence=IMP] [GO:1900430 "positive regulation of
            filamentous growth of a population of unicellular organisms"
            evidence=IMP] [GO:0036178 "filamentous growth of a population of
            unicellular organisms in response to neutral pH" evidence=IMP]
            [GO:1900442 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to neutral pH"
            evidence=IMP] [GO:0036180 "filamentous growth of a population of
            unicellular organisms in response to biotic stimulus" evidence=IMP]
            [GO:1900445 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to biotic stimulus"
            evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
            [GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
            "regulation of single-species biofilm formation on inanimate
            substrate" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
            evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0031496 "positive regulation of mating type
            switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
            replication" evidence=IEA] [GO:0061412 "positive regulation of
            transcription from RNA polymerase II promoter in response to amino
            acid starvation" evidence=IEA] [GO:0036244 "cellular response to
            neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
            stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
            GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
            GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
            GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
            RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
            STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
        Length = 1690

 Score = 602 (217.0 bits), Expect = 3.1e-57, P = 3.1e-57
 Identities = 125/292 (42%), Positives = 177/292 (60%)

Query:   150 EEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMG 209
             +E  E +   N   +        P  + GG +++YQ++GL WM+SL+ N +NGILADEMG
Sbjct:   750 DEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMG 809

Query:   210 LGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARN 269
             LGKT+QTISLL Y+   + I GP +VIVP ST+ NW  EF+KW P+++ I   G  + R 
Sbjct:   810 LGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRK 869

Query:   270 AMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSE-IVREF 328
              M  D+   G + + +T++E  I+++G+  +  W +++IDE HR+KN  SKLSE + + +
Sbjct:   870 VMQHDIRT-GNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNY 928

Query:   329 KTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTE----------EFMGD 378
              +  RL+LTGTPLQNNL ELWALLNF+LP           WFNT           E   +
Sbjct:   929 HSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEE 988

Query:   379 HS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +  +I RLH VL+PFLLRRLK +VEK L  K E  V    S +Q + Y ++
Sbjct:   989 ETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQM 1040

 Score = 178 (67.7 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
 Identities = 34/71 (47%), Positives = 47/71 (66%)

Query:     5 EEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMG 64
             +E  E +   N   +        P  + GG +++YQ++GL WM+SL+ N +NGILADEMG
Sbjct:   750 DEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMG 809

Query:    65 LGKTLQTISLL 75
             LGKT+QTISLL
Sbjct:   810 LGKTIQTISLL 820

 Score = 47 (21.6 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query:   187 RGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRN 228
             RG   ++S Y   ++ + ADE    +  Q  ++LG + +Y+N
Sbjct:  1489 RGRGSLLSRYTPSVDPLTADERSTLQN-QIENILGLIINYKN 1529


>UNIPROTKB|Q5AM49 [details] [associations]
            symbol:SNF2 "Putative uncharacterized protein SNF2"
            species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0009405
            "pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
            evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
            [GO:0036178 "filamentous growth of a population of unicellular
            organisms in response to neutral pH" evidence=IMP] [GO:0036180
            "filamentous growth of a population of unicellular organisms in
            response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
            response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
            growth of a population of unicellular organisms" evidence=IMP]
            [GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
            [GO:1900430 "positive regulation of filamentous growth of a
            population of unicellular organisms" evidence=IMP] [GO:1900442
            "positive regulation of filamentous growth of a population of
            unicellular organisms in response to neutral pH" evidence=IMP]
            [GO:1900445 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to biotic stimulus"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
            GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
            GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
            GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
            RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
            STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
        Length = 1690

 Score = 602 (217.0 bits), Expect = 3.1e-57, P = 3.1e-57
 Identities = 125/292 (42%), Positives = 177/292 (60%)

Query:   150 EEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMG 209
             +E  E +   N   +        P  + GG +++YQ++GL WM+SL+ N +NGILADEMG
Sbjct:   750 DEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMG 809

Query:   210 LGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARN 269
             LGKT+QTISLL Y+   + I GP +VIVP ST+ NW  EF+KW P+++ I   G  + R 
Sbjct:   810 LGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRK 869

Query:   270 AMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSE-IVREF 328
              M  D+   G + + +T++E  I+++G+  +  W +++IDE HR+KN  SKLSE + + +
Sbjct:   870 VMQHDIRT-GNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNY 928

Query:   329 KTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTE----------EFMGD 378
              +  RL+LTGTPLQNNL ELWALLNF+LP           WFNT           E   +
Sbjct:   929 HSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEE 988

Query:   379 HS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +  +I RLH VL+PFLLRRLK +VEK L  K E  V    S +Q + Y ++
Sbjct:   989 ETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQM 1040

 Score = 178 (67.7 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
 Identities = 34/71 (47%), Positives = 47/71 (66%)

Query:     5 EEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMG 64
             +E  E +   N   +        P  + GG +++YQ++GL WM+SL+ N +NGILADEMG
Sbjct:   750 DEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMG 809

Query:    65 LGKTLQTISLL 75
             LGKT+QTISLL
Sbjct:   810 LGKTIQTISLL 820

 Score = 47 (21.6 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query:   187 RGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRN 228
             RG   ++S Y   ++ + ADE    +  Q  ++LG + +Y+N
Sbjct:  1489 RGRGSLLSRYTPSVDPLTADERSTLQN-QIENILGLIINYKN 1529


>UNIPROTKB|D4AA07 [details] [associations]
            symbol:Smarca4 "Transcription activator BRG1" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
            ArrayExpress:D4AA07 Uniprot:D4AA07
        Length = 1262

 Score = 597 (215.2 bits), Expect = 5.5e-57, P = 5.5e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   551 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 610

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   611 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 669

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   670 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 729

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   730 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 789

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   790 KVEYVIKCDMSALQRVLY 807

 Score = 163 (62.4 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   551 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 592


>WB|WBGene00004204 [details] [associations]
            symbol:swsn-4 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
            GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
            RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
            SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
            KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
            Uniprot:G5EF53
        Length = 1474

 Score = 597 (215.2 bits), Expect = 8.0e-57, P = 8.0e-57
 Identities = 122/256 (47%), Positives = 161/256 (62%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTISL+ Y+   +   GP++VIVP S
Sbjct:   533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKK 300
             TL NW NEF KW P++  I   G +DAR   +   +  G ++V +T+YE  I+E+ +  K
Sbjct:   593 TLSNWQNEFAKWAPSVTTIIYKGTKDARRR-VEGQIRKGAFNVLMTTYEYVIKEKALLGK 651

Query:   301 FNWRYLVIDEAHRIKNEKSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWALLNFLLPXX 359
               W+Y++IDE HR+KN   KL+ ++  F    +RLLLTGTPLQN L ELWALLNFLLP  
Sbjct:   652 IRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSI 711

Query:   360 XXXXXXXXXWFNTE--------EFMGDHS--IIERLHSVLKPFLLRRLKSEVEKRLKPKK 409
                      WFN          E   + +  II RLH VL+PFLLRRLK EVE +L  K 
Sbjct:   712 FSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKT 771

Query:   410 ELKVYVGLSKMQREWY 425
             E  +    S +Q+  Y
Sbjct:   772 EYVIKCDQSALQKVIY 787

 Score = 163 (62.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
 Identities = 28/40 (70%), Positives = 36/40 (90%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ++GL WM+SLY N +NGILADEMGLGKT+QTISL+
Sbjct:   533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLV 572

 Score = 37 (18.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query:   134 KKNVDPSDHRHRMTEQEEDE 153
             KK  +  D    M E EE+E
Sbjct:  1423 KKKKESEDSEDPMEEDEEEE 1442


>UNIPROTKB|F1MJ46 [details] [associations]
            symbol:SMARCA4 "Transcription activator BRG1" species:9913
            "Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
            "npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
            formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
            differentiation" evidence=IEA] [GO:0048730 "epidermis
            morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
            "positive regulation of DNA binding" evidence=IEA] [GO:0035887
            "aortic smooth muscle cell differentiation" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
            "forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
            differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
            organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
            evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
            sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0007403 "glial cell fate determination"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
            [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
            [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
            GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
            GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
            GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
            GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
            GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
            GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
            IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
            EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
            Uniprot:F1MJ46
        Length = 1604

 Score = 597 (215.2 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   744 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 803

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   804 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 862

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   863 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 922

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   923 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 982

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   983 KVEYVIKCDMSALQRVLY 1000

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   744 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 785


>UNIPROTKB|A7Z019 [details] [associations]
            symbol:SMARCA4 "Transcription activator BRG1" species:9913
            "Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
            "npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
            formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
            differentiation" evidence=IEA] [GO:0048730 "epidermis
            morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
            "positive regulation of DNA binding" evidence=IEA] [GO:0035887
            "aortic smooth muscle cell differentiation" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
            "forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
            differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
            organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
            evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
            sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0007403 "glial cell fate determination"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
            [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
            [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
            GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
            GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
            GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
            GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
            GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
            HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
            OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
            RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
            SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
            CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
            Uniprot:A7Z019
        Length = 1606

 Score = 597 (215.2 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   744 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 803

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   804 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 862

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   863 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 922

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   923 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 982

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   983 KVEYVIKCDMSALQRVLY 1000

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   744 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 785


>MGI|MGI:88192 [details] [associations]
            symbol:Smarca4 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 4"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
            evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
            [GO:0000977 "RNA polymerase II regulatory region sequence-specific
            DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=ISO] [GO:0001570
            "vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
            development" evidence=IMP] [GO:0001832 "blastocyst growth"
            evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
            [GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
            binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003713 "transcription
            coactivator activity" evidence=ISO] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
            [GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
            evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
            [GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO;IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IMP] [GO:0007403 "glial cell fate determination"
            evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=IPI]
            [GO:0010424 "DNA methylation on cytosine within a CG sequence"
            evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
            evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
            [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
            matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
            differentiation" evidence=IMP] [GO:0030308 "negative regulation of
            cell growth" evidence=ISO] [GO:0030900 "forebrain development"
            evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
            [GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
            "protein complex binding" evidence=ISO] [GO:0035116 "embryonic
            hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
            muscle cell differentiation" evidence=IMP] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
            "positive regulation of DNA binding" evidence=IGI] [GO:0043923
            "positive regulation by host of viral transcription" evidence=ISO]
            [GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
            "protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
            organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
            morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
            binding" evidence=ISO] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
            evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
            [GO:0060766 "negative regulation of androgen receptor signaling
            pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
            evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
            [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
            complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
            GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
            GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
            GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
            GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
            GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
            GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
            GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
            GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
            HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
            EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
            IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
            RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
            ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
            IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
            PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
            Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
            KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
            NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
        Length = 1613

 Score = 597 (215.2 bits), Expect = 9.7e-57, P = 9.7e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 870

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   991 KVEYVIKCDMSALQRVLY 1008

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793


>RGD|621728 [details] [associations]
            symbol:Smarca4 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 4"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
            "heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
            evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
            sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
            polymerase II transcription coactivator activity" evidence=ISO]
            [GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
            embryonic development" evidence=ISO] [GO:0001832 "blastocyst
            growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
            evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
            [GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
            development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
            "transcription coactivator activity" evidence=ISO] [GO:0003714
            "transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
            evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
            [GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
            evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0010424 "DNA methylation on cytosine within a CG sequence"
            evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
            maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
            [GO:0030198 "extracellular matrix organization" evidence=ISO]
            [GO:0030216 "keratinocyte differentiation" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
            "hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
            binding" evidence=ISO] [GO:0032403 "protein complex binding"
            evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=ISO] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
            binding" evidence=ISO] [GO:0043923 "positive regulation by host of
            viral transcription" evidence=ISO] [GO:0043966 "histone H3
            acetylation" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0047485 "protein
            N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
            morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0051091 "positive regulation of sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0060318
            "definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
            "heart trabecula formation" evidence=ISO] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=ISO]
            [GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
            [GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
            complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
            GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
            GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
            GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
            HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
            ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
            PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
            Genevestigator:Q8K1P7 Uniprot:Q8K1P7
        Length = 1613

 Score = 597 (215.2 bits), Expect = 9.7e-57, P = 9.7e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 870

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   991 KVEYVIKCDMSALQRVLY 1008

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793


>UNIPROTKB|E2RJ89 [details] [associations]
            symbol:SMARCA4 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
            Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
            OMA:HKPMESM Uniprot:E2RJ89
        Length = 1614

 Score = 597 (215.2 bits), Expect = 9.7e-57, P = 9.7e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 870

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   991 KVEYVIKCDMSALQRVLY 1008

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793


>UNIPROTKB|G3V790 [details] [associations]
            symbol:Smarca4 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 4, isoform
            CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
            polymerase II regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
            "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
            evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=IEA]
            [GO:0007403 "glial cell fate determination" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0010424 "DNA methylation on cytosine within a CG sequence"
            evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
            [GO:0030198 "extracellular matrix organization" evidence=IEA]
            [GO:0030216 "keratinocyte differentiation" evidence=IEA]
            [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
            "hindbrain development" evidence=IEA] [GO:0035116 "embryonic
            hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
            muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
            acetylation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
            [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
            "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
            "heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
            complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
            UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
        Length = 1614

 Score = 597 (215.2 bits), Expect = 9.7e-57, P = 9.7e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 870

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   991 KVEYVIKCDMSALQRVLY 1008

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793


>UNIPROTKB|F1M6Y4 [details] [associations]
            symbol:Smarca4 "Transcription activator BRG1" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
            morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
            growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
            "perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
            chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
            determination" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
            within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
            maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
            organization" evidence=IEA] [GO:0030216 "keratinocyte
            differentiation" evidence=IEA] [GO:0030900 "forebrain development"
            evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0035887 "aortic smooth muscle cell differentiation"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
            evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
            evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
            [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
            GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
            GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
            GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
            GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
            GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
            GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
            ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
        Length = 1618

 Score = 597 (215.2 bits), Expect = 9.8e-57, P = 9.8e-57
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 870

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   991 KVEYVIKCDMSALQRVLY 1008

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793


>UNIPROTKB|P51532 [details] [associations]
            symbol:SMARCA4 "Transcription activator BRG1" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
            "SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
            corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
            [GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
            remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IDA] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
            of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI;IDA]
            [GO:0060766 "negative regulation of androgen receptor signaling
            pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
            evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IGI] [GO:0045749 "negative regulation of S phase of
            mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
            coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=NAS]
            [GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
            "positive regulation by host of viral transcription" evidence=IMP]
            [GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
            retina development" evidence=IEP] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
            GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
            GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
            GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
            InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
            GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
            CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
            EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
            IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
            IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
            RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
            RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
            PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
            ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
            MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
            PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
            Ensembl:ENST00000413806 Ensembl:ENST00000429416
            Ensembl:ENST00000444061 Ensembl:ENST00000450717
            Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
            GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
            MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
            PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
            GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
            CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
            Uniprot:P51532
        Length = 1647

 Score = 597 (215.2 bits), Expect = 1.0e-56, P = 1.0e-56
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 870

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   991 KVEYVIKCDMSALQRVLY 1008

 Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793


>WB|WBGene00016868 [details] [associations]
            symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
            ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
            EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
            UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
            NextBio:910548 Uniprot:Q22944
        Length = 1336

 Score = 595 (214.5 bits), Expect = 1.0e-56, P = 1.0e-56
 Identities = 125/308 (40%), Positives = 179/308 (58%)

Query:   133 EKKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGG----EMRDYQVRG 188
             +K   D  ++ ++     ED    A+   E       +   F + GG    +++ YQ++G
Sbjct:   319 DKARNDDDEYENKTKMNIEDYYTTAHGVRE-----EIKEQHFMMGGGNPSLKLKPYQIKG 373

Query:   189 LNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNE 248
             L WM+SL+ N +NGILADEMGLGKT+QTI+ + Y+   +  +GP +VIVP ST+ NW NE
Sbjct:   374 LEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNE 433

Query:   249 FKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVI 308
             F KW   +  I   G ++ R  +   ++  G+++V +T++E  IRE+ +  K  W+Y++I
Sbjct:   434 FDKWAANVHLIAYKGPKETRK-VFEPIIKSGKFNVLLTTFEYVIREKALLGKLRWKYMII 492

Query:   309 DEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXX 367
             DE HR+KN+  KL+E++   F+   RLL+TGTPLQN L ELWALLNFLLP          
Sbjct:   493 DEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSIFSSCSTFE 552

Query:   368 XWFNTE--------EFMGDHS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGL 417
              WFN          E   + +  II RLH VL+PFLLRRLK EVE  L  K E  V   +
Sbjct:   553 QWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDM 612

Query:   418 SKMQREWY 425
             S +Q+  Y
Sbjct:   613 SALQKVLY 620

 Score = 155 (59.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
 Identities = 28/51 (54%), Positives = 40/51 (78%)

Query:    29 FYIKGG----EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             F + GG    +++ YQ++GL WM+SL+ N +NGILADEMGLGKT+QTI+ +
Sbjct:   355 FMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFI 405

 Score = 43 (20.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             KEK      D  H+   +E++ E    A  E K +
Sbjct:  1253 KEKHKDKDKDKEHKKKSREDETEEERRARKEAKRL 1287

 Score = 40 (19.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
 Identities = 11/35 (31%), Positives = 22/35 (62%)

Query:   129 SLTKEKKNVDPSDH-RHRMTEQEEDEELLANANTE 162
             SL KEKK+    DH + +  E+++++E   + ++E
Sbjct:  1047 SLKKEKKH-RKEDHPKEKEKEKKKEKEQEKSTDSE 1080


>UNIPROTKB|Q9HBD4 [details] [associations]
            symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
            sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
            morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
            growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
            euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0006346 "methylation-dependent chromatin silencing"
            evidence=IEA] [GO:0007403 "glial cell fate determination"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
            sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
            evidence=IEA] [GO:0030198 "extracellular matrix organization"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
            "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
            "aortic smooth muscle cell differentiation" evidence=IEA]
            [GO:0043388 "positive regulation of DNA binding" evidence=IEA]
            [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
            [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
            [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
            "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
            GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
            GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
            EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
            GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
            GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
            GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
            GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
            CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
            KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
            GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
            SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
            Uniprot:Q9HBD4
        Length = 1679

 Score = 597 (215.2 bits), Expect = 1.0e-56, P = 1.0e-56
 Identities = 118/258 (45%), Positives = 163/258 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+ Y+  ++ I GP ++IVP
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P++  +   G   AR A +   +  G+++V +T+YE  I+++ + 
Sbjct:   812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQ-LRSGKFNVLLTTYEYIIKDKHIL 870

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    RLLLTGTPLQN L ELWALLNFLLP
Sbjct:   871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +QR  Y
Sbjct:   991 KVEYVIKCDMSALQRVLY 1008

 Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 27/42 (64%), Positives = 37/42 (88%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL W++SLY N +NGILADEMGLGKT+QTI+L+
Sbjct:   752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI 793


>UNIPROTKB|F1RG74 [details] [associations]
            symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
            GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
            Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
        Length = 3230

 Score = 586 (211.3 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   609 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 662

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   663 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 722

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   723 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 782

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   783 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 842

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   843 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 876

 Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   609 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 662

Query:    74 LL 75
             LL
Sbjct:   663 LL 664

 Score = 48 (22.0 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
 Identities = 16/53 (30%), Positives = 24/53 (45%)

Query:   132 KEKKNVDPSDHRHRMTEQE-EDEE--LLANANTEGKTIVSFENSPFYIKGGEM 181
             K+  + D  D      E E EDEE  + A    EG+   + E +    +GGE+
Sbjct:   391 KQPWHPDEDDEEFTANEDEAEDEEDTIAAEEQLEGEVDPAVELNELAREGGEL 443

 Score = 40 (19.1 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query:     3 EQEEDEE--LLANANTEGKTIVSFENSPFYIKGGEM 36
             ++ EDEE  + A    EG+   + E +    +GGE+
Sbjct:   408 DEAEDEEDTIAAEEQLEGEVDPAVELNELAREGGEL 443

 Score = 38 (18.4 bits), Expect = 1.6e-56, Sum P(3) = 1.6e-56
 Identities = 9/23 (39%), Positives = 11/23 (47%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             +E  + D S       EQ EDEE
Sbjct:   492 EEAPHEDSSSQSDSAEEQSEDEE 514


>UNIPROTKB|J9PA15 [details] [associations]
            symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
            EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
            EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
            EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
            Uniprot:J9PA15
        Length = 1555

 Score = 586 (211.3 bits), Expect = 1.7e-56, Sum P(2) = 1.7e-56
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   608 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 661

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   662 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 721

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   722 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 781

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   782 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 841

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   842 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 875

 Score = 161 (61.7 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   608 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 661

Query:    74 LL 75
             LL
Sbjct:   662 LL 663

 Score = 39 (18.8 bits), Expect = 1.7e-56, Sum P(2) = 1.7e-56
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query:     2 TEQEEDEELLANAN---TEGKT 20
             +E+E++EE+ AN++    EG T
Sbjct:   466 SEEEDEEEVEANSSDCEAEGAT 487

 Score = 39 (18.8 bits), Expect = 1.7e-56, Sum P(2) = 1.7e-56
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query:   147 TEQEEDEELLANAN---TEGKT 165
             +E+E++EE+ AN++    EG T
Sbjct:   466 SEEEDEEEVEANSSDCEAEGAT 487


>UNIPROTKB|Q9NRZ9 [details] [associations]
            symbol:HELLS "Lymphoid-specific helicase" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
            division" evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
            "centromeric heterochromatin" evidence=ISS] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=ISS]
            [GO:0007275 "multicellular organismal development" evidence=ISS]
            [GO:0010216 "maintenance of DNA methylation" evidence=ISS]
            [GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
            [GO:0000775 "chromosome, centromeric region" evidence=ISS]
            [GO:0046651 "lymphocyte proliferation" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
            EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
            GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
            GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
            EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
            EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
            EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
            EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
            IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
            IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
            IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
            ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
            PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
            DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
            Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
            KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
            CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
            HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
            HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
            GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
            Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
        Length = 838

 Score = 583 (210.3 bits), Expect = 1.7e-56, P = 1.7e-56
 Identities = 123/276 (44%), Positives = 169/276 (61%)

Query:   167 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 226
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +  M   
Sbjct:   210 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ- 267

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMM-PGEWD--- 282
             R + GP +V  P STL NWM EFK++ P +  +   G Q+ R  ++R++    G      
Sbjct:   268 RGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHP 327

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             V ITS+E+ +R+R   +   W+YL++DE HRIKN K +L   ++ F   N+LLLTGTPLQ
Sbjct:   328 VVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQ 387

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFN-------TEEFMG---DHSIIERLHSVLKPF 392
             NNL ELW+LLNFLLP           WF+        E+ +    + +++  LH +L PF
Sbjct:   388 NNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPF 447

Query:   393 LLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             LLRRLKS+V   + PK+E+ VY  LSK Q  +YT +
Sbjct:   448 LLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAI 483

 Score = 165 (63.1 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query:    22 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +   I R
Sbjct:   210 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQR 268


>UNIPROTKB|G3N326 [details] [associations]
            symbol:LOC788113 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
            GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
            Ensembl:ENSBTAT00000063921 Uniprot:G3N326
        Length = 934

 Score = 586 (211.3 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   592 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 645

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   646 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 705

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   706 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 765

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   766 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 825

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   826 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 859

 Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   592 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 645

Query:    74 LL 75
             LL
Sbjct:   646 LL 647


>POMBASE|SPCC1620.14c [details] [associations]
            symbol:snf22 "ATP-dependent DNA helicase Snf22"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
            [GO:0000991 "core RNA polymerase II binding transcription factor
            activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
            [GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
            "chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
            meiotic recombination" evidence=IMP] [GO:0010972 "negative
            regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
            [GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
            by regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:1900400 "regulation of iron ion import by
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
            SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
            GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
            GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
            GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
            InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
            HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
            PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
            DIP:DIP-48377N STRING:O94421 PRIDE:O94421
            EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
            NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
        Length = 1680

 Score = 582 (209.9 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 119/269 (44%), Positives = 170/269 (63%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P    GG ++DYQ++GL WM+SLY N +NGILADEMGLGKT+QTI+ + Y+   +N  GP
Sbjct:   861 PKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGP 920

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
              ++IVP STL NW+ EF+KW P+++ I   G    R  + +  +    ++V +T++E  I
Sbjct:   921 FLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTL-QSQIRSSNFNVLLTTFEYII 979

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKL-SEIVREFKTTNRLLLTGTPLQNNLHELWAL 351
             ++R +  +  W +++IDE HRIKN +SKL S +   + +  RL+LTGTPLQNNL ELWAL
Sbjct:   980 KDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWAL 1039

Query:   352 LNFLLPXXXXXXXXXXXWFNT-------EEFMGDHS-----IIERLHSVLKPFLLRRLKS 399
             LNF+LP           WFNT       ++ +G +      II+RLH VL+PFL RRLK 
Sbjct:  1040 LNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKK 1099

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             +VEK L  K E  +   LS +Q + Y ++
Sbjct:  1100 DVEKELPDKVEKVIKCPLSGLQLKLYQQM 1128

 Score = 174 (66.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 31/54 (57%), Positives = 42/54 (77%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             P    GG ++DYQ++GL WM+SLY N +NGILADEMGLGKT+QTI+ +   I++
Sbjct:   861 PKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEK 914

 Score = 42 (19.8 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 17/93 (18%), Positives = 31/93 (33%)

Query:    78 KIDRFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKNV 137
             K  R  +LLKQT+ +   +T                                +++E KN+
Sbjct:   790 KDTRITHLLKQTDQYLENLTR----AVRIQQSNIHSGNTSGKGSNSAELEAPISEEDKNL 845

Query:   138 DPSDHRHRMTEQEEDEELLANANTEGKTIVSFE 170
             D     HR+ E+ E  ++      +   +   E
Sbjct:   846 DYFKVAHRIHEEVEQPKIFVGGTLKDYQLKGLE 878

 Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSE 323
             M I E  +  K NW+YL +D + +  +  S L++
Sbjct:  1216 MTIMEDYLRSK-NWKYLRLDGSTKSDDRCSLLAQ 1248


>UNIPROTKB|F6XHF3 [details] [associations]
            symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
            EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
            Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
            EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
            Uniprot:F6XHF3
        Length = 1823

 Score = 586 (211.3 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   608 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 661

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   662 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 721

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   722 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 781

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   782 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 841

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   842 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 875

 Score = 161 (61.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   608 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 661

Query:    74 LL 75
             LL
Sbjct:   662 LL 663

 Score = 39 (18.8 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query:     2 TEQEEDEELLANAN---TEGKT 20
             +E+E++EE+ AN++    EG T
Sbjct:   466 SEEEDEEEVEANSSDCEAEGAT 487

 Score = 39 (18.8 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query:   147 TEQEEDEELLANAN---TEGKT 165
             +E+E++EE+ AN++    EG T
Sbjct:   466 SEEEDEEEVEANSSDCEAEGAT 487


>UNIPROTKB|E2R6G6 [details] [associations]
            symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
            Uniprot:E2R6G6
        Length = 1825

 Score = 586 (211.3 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   608 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 661

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   662 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 721

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   722 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 781

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   782 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 841

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   842 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 875

 Score = 161 (61.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   608 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 661

Query:    74 LL 75
             LL
Sbjct:   662 LL 663

 Score = 39 (18.8 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query:     2 TEQEEDEELLANAN---TEGKT 20
             +E+E++EE+ AN++    EG T
Sbjct:   466 SEEEDEEEVEANSSDCEAEGAT 487

 Score = 39 (18.8 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query:   147 TEQEEDEELLANAN---TEGKT 165
             +E+E++EE+ AN++    EG T
Sbjct:   466 SEEEDEEEVEANSSDCEAEGAT 487


>ASPGD|ASPL0000042729 [details] [associations]
            symbol:AN2278 species:162425 "Emericella nidulans"
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
            SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
            GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
            ProteinModelPortal:Q5BB02 STRING:Q5BB02
            EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
            OMA:GSDHSSP Uniprot:Q5BB02
        Length = 1407

 Score = 589 (212.4 bits), Expect = 5.2e-56, P = 5.2e-56
 Identities = 120/262 (45%), Positives = 166/262 (63%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P  + GG +++YQ++GL WMISLY N +NGILADEMGLGKT+QTISL+ ++   +   GP
Sbjct:   529 PSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIERKRNNGP 588

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
              +VIVP STL NW  EF+KW P++  I   G  +AR    +++   G + V +T+YE  I
Sbjct:   589 FLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPNARKQQQQNIRW-GNFQVLLTTYEYII 647

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN-RLLLTGTPLQNNLHELWAL 351
             ++R +  K  W ++++DE HR+KN +SKLS  + ++ T+  RL+LTGTPLQNNL ELWAL
Sbjct:   648 KDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNNLPELWAL 707

Query:   352 LNFLLPXXXXXXXXXXXWFNTE----------EFMGDHS--IIERLHSVLKPFLLRRLKS 399
             LNF+LP           WFNT           +   +    +I RLH VL+PFLLRRLK 
Sbjct:   708 LNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRPFLLRRLKK 767

Query:   400 EVEKRLKPKKELKVYVGLSKMQ 421
             +VEK L  K+E  +    S +Q
Sbjct:   768 DVEKDLPDKQERVIKCRFSALQ 789

 Score = 185 (70.2 bits), Expect = 8.9e-11, P = 8.9e-11
 Identities = 34/54 (62%), Positives = 44/54 (81%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             P  + GG +++YQ++GL WMISLY N +NGILADEMGLGKT+QTISL+   I+R
Sbjct:   529 PSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIER 582


>DICTYBASE|DDB_G0285205 [details] [associations]
            symbol:snf2a "SNF2-related protein SNF2a"
            species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
            EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
            ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
            EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
            OMA:HASKHRV Uniprot:Q54NM0
        Length = 1604

 Score = 590 (212.7 bits), Expect = 5.4e-56, P = 5.4e-56
 Identities = 123/264 (46%), Positives = 165/264 (62%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P  + GG++++YQV GL W+ISLY   +NGILADEMGLGKT+QTI+ + ++    N+  P
Sbjct:   616 PDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISFLYERMNVREP 675

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
              +V+ P ST+ NW++EF +W P L  I   G QD R    R +     + V ITS+E  I
Sbjct:   676 FLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRETARTIPR-NAFCVVITSFEYII 734

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALL 352
             ++R    + +W Y++IDE HRIKN+ SKLS  +R++ + NRLLLTGTPLQN+L ELWALL
Sbjct:   735 KDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNRLLLTGTPLQNDLGELWALL 794

Query:   353 NFLLPXXXXXXXXXXXWFNTE-EFMG--------DHS--IIERLHSVLKPFLLRRLKSEV 401
             NFLLP           WFN   +  G        + S  II RLH VL+ FLLRRLKS+V
Sbjct:   795 NFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESLIIINRLHQVLRFFLLRRLKSDV 854

Query:   402 EKRLKPKKELKVYVGLSKMQREWY 425
             E +L  KKE  +   +S +Q   Y
Sbjct:   855 ESQLPDKKEKVIKCNMSALQIAMY 878

 Score = 165 (63.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
 Identities = 30/56 (53%), Positives = 42/56 (75%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDRFD 83
             P  + GG++++YQV GL W+ISLY   +NGILADEMGLGKT+QTI+ +    +R +
Sbjct:   616 PDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISFLYERMN 671

 Score = 42 (19.8 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query:   133 EKKNVDPSDHRHRMTEQEEDEELLANANTEGKT-IVSFENSP 173
             E++   P   + +  +Q+E +    N++ E +  I+  ++ P
Sbjct:  1317 ERRRATPQQRKQQRQQQQEKQNHENNSDNENQDDIIQVDDHP 1358


>TAIR|locus:2087780 [details] [associations]
            symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0009910 "negative regulation of flower development"
            evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
            [GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
            formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
            response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
            cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
            evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
            [GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
            adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0033043 "regulation of
            organelle organization" evidence=RCA] [GO:0045010 "actin
            nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
            evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
            [GO:0048765 "root hair cell differentiation" evidence=RCA]
            [GO:0071555 "cell wall organization" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
            GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
            GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
            GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
            EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
            SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
            GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
            OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
            Uniprot:Q7X9V2
        Length = 2055

 Score = 591 (213.1 bits), Expect = 6.5e-56, P = 6.5e-56
 Identities = 118/260 (45%), Positives = 166/260 (63%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             PF +K   +R+YQ  GL+W++++YE  +NGILADEMGLGKT+ TI+LL ++   + I GP
Sbjct:   529 PFLLKHS-LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGP 587

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
             H+++VP S +LNW  EF KWCP  + +   G    R    +  M    + VCIT+Y + I
Sbjct:   588 HLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVI 647

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALL 352
             ++  +FK+  W+YL++DEAH IKN KS+  + +  F +  R+LLTGTPLQN+L ELW+L+
Sbjct:   648 QDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLM 707

Query:   353 NFLLPXXXXXXXXXXXWF-NTEEFM--GDHSI----IERLHSVLKPFLLRRLKSEVEKRL 405
             +FL+P           WF N    M  G   I    I+RLH+VL+PFLLRRLK +VEK+L
Sbjct:   708 HFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQL 767

Query:   406 KPKKELKVYVGLSKMQREWY 425
               K E  ++  LSK QR  Y
Sbjct:   768 PSKHEHVIFCRLSKRQRNLY 787

 Score = 151 (58.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
 Identities = 28/48 (58%), Positives = 39/48 (81%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             PF +K   +R+YQ  GL+W++++YE  +NGILADEMGLGKT+ TI+LL
Sbjct:   529 PFLLKHS-LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALL 575

 Score = 42 (19.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query:   148 EQEEDEELLANANTEGKTIVSFEN--SPFYIKG 178
             E+EE++E+   AN+    ++S      PF+  G
Sbjct:  2009 EEEEEQEVDEKANSAEIEMISCSQWYDPFFTSG 2041

 Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query:   138 DPSDHRHRMT--EQEEDEELL-------ANANTEGKTIVSFEN 171
             D  D R  +T   QE+D ++L       A A   G+ I SFEN
Sbjct:  1346 DIRDERAVITTSSQEDDTDVLDDVKQMAAAAADAGQAISSFEN 1388

 Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELL 156
             ++++ VD  +      E+ ED+EL+
Sbjct:  1291 EQEEAVDNQEFTEEPVERPEDDELV 1315


>SGD|S000002742 [details] [associations]
            symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
            the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
            activity" evidence=IMP] [GO:0043486 "histone exchange"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
            GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
            EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
            PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
            DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
            PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
            CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
            GermOnline:YDR334W Uniprot:Q05471
        Length = 1514

 Score = 489 (177.2 bits), Expect = 6.8e-56, Sum P(3) = 6.8e-56
 Identities = 98/218 (44%), Positives = 137/218 (62%)

Query:   140 SDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENG 199
             +++R  + + EED E       E  ++V     P  ++G  +R YQ +GLNW+ SLY N 
Sbjct:   659 NENRDDIKDVEEDAE--TKVQEEQLSVVDVP-VPSLLRGN-LRTYQKQGLNWLASLYNNH 714

Query:   200 INGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAI 259
              NGILADEMGLGKT+QTISLL Y+   +   GPH+++VP S LLNW  EFK++ P  + +
Sbjct:   715 TNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVL 774

Query:   260 CLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKS 319
                G    R    +    P  + VCI SY++ ++++  FK+  W+Y+V+DEAH IKN +S
Sbjct:   775 TYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRS 834

Query:   320 KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
                + +  F T  RLLLTGTPLQNNL ELW+LL FL+P
Sbjct:   835 TRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMP 872

 Score = 166 (63.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
 Identities = 38/71 (53%), Positives = 46/71 (64%)

Query:     5 EEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMG 64
             EED E       E  ++V     P  ++G  +R YQ +GLNW+ SLY N  NGILADEMG
Sbjct:   669 EEDAE--TKVQEEQLSVVDVP-VPSLLRGN-LRTYQKQGLNWLASLYNNHTNGILADEMG 724

Query:    65 LGKTLQTISLL 75
             LGKT+QTISLL
Sbjct:   725 LGKTIQTISLL 735

 Score = 115 (45.5 bits), Expect = 6.8e-56, Sum P(3) = 6.8e-56
 Identities = 24/44 (54%), Positives = 32/44 (72%)

Query:   382 IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             + +LH VL+P+LLRRLK++VEK++  K E  VY  LSK QR  Y
Sbjct:   918 VAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLY 961

 Score = 41 (19.5 bits), Expect = 6.8e-56, Sum P(3) = 6.8e-56
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query:    67 KTLQTISLLGPKIDRFDYLLKQTEIFSH--FMTNQGV 101
             K ++TI    P  D   Y  KQ ++  H   + NQG+
Sbjct:   326 KEIKTIITYKP--DPISYFYKQQDLQIHTDHLINQGI 360

 Score = 37 (18.1 bits), Expect = 1.8e-55, Sum P(3) = 1.8e-55
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query:     2 TEQEEDEELLANANTEGKTIVSFENSP 28
             T  +EDEE+ A+   E     S E +P
Sbjct:   496 TSSDEDEEVDADVGLENSP-ASTEATP 521


>ASPGD|ASPL0000056677 [details] [associations]
            symbol:AN1024 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
            recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
            Uniprot:C8VTY9
        Length = 868

 Score = 579 (208.9 bits), Expect = 8.1e-56, P = 8.1e-56
 Identities = 121/315 (38%), Positives = 185/315 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEED-EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLN 190
             K   NVD + +       E   +E  A     G+  +     P  + GG+MR YQ+ GL 
Sbjct:   152 KADLNVDEAKNTTVQEALEHAADEFEAKPTVLGEQELVATQQPAPVTGGKMRKYQLEGLE 211

Query:   191 WMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFK 250
             W+ SL+ NG+ GILADEMGLGKT+Q ISL+ + K + N++GP ++  P ST+ NW++EF 
Sbjct:   212 WLKSLWMNGLCGILADEMGLGKTVQAISLIAFFKEH-NVSGPFLISAPLSTVSNWVDEFA 270

Query:   251 KWCPTLRAICLIGDQDARNAM------IRDVMMPGEWDVCITSYEMCIRERGVFKKFNWR 304
             +W P ++ +   G +D R  +      +RD   P ++ V  TSYE+C+ +R    ++ WR
Sbjct:   271 RWTPGIKTVLYHGTRDERAQLRKKFMNLRDQKSP-DFPVVCTSYEICMNDRKFLAQYQWR 329

Query:   305 YLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXX 364
             Y+++DE HR+KN   +L + +  + + NRLL+TGTPLQNN+ ELW+LL+FLLP       
Sbjct:   330 YIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGTPLQNNITELWSLLHFLLPEIFNDLN 389

Query:   365 XXXXWFNTEEFM---GDHSIIER--------LHSVLKPFLLRRLKSEVEKRLKPKKELKV 413
                 WF+    +   G   +IER        +HS+LKPFLLRR+K++VE  L  K+E  +
Sbjct:   390 SFQNWFDFSSVLDNNGQTDMIERRKRTLVSTMHSILKPFLLRRVKTDVESALPKKREYIL 449

Query:   414 YVGLSKMQREWYTKV 428
             Y  L+  Q++ Y ++
Sbjct:   450 YAPLTLEQKDLYREI 464

 Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 33/68 (48%), Positives = 44/68 (64%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             +E  A     G+  +     P  + GG+MR YQ+ GL W+ SL+ NG+ GILADEMGLGK
Sbjct:   174 DEFEAKPTVLGEQELVATQQPAPVTGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGK 233

Query:    68 TLQTISLL 75
             T+Q ISL+
Sbjct:   234 TVQAISLI 241


>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
            symbol:PF08_0048 "ATP-dependent helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
            RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
            KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
        Length = 2082

 Score = 589 (212.4 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 124/298 (41%), Positives = 180/298 (60%)

Query:   136 NVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISL 195
             N D +++ H+    + D+ L  N + +  T +     P  IK   +RDYQ  GL+W++ L
Sbjct:   623 NNDDNNNEHKNDSDDNDDILTCNMDEKHLTKI-----PPIIKA-TLRDYQHAGLHWLLYL 676

Query:   196 YENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPT 255
             Y+N INGILADEMGLGKTLQ ISLL Y+ +Y NI GPH+VIVP S L+NW  E K++CP 
Sbjct:   677 YKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPTSILINWEIELKRFCPC 736

Query:   256 LRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIK 315
              + +   G+Q+ R            + +CI+SY   +++  VFK+  W+Y+++DEAH IK
Sbjct:   737 FKILSYYGNQNERYKKRVGWFNKDSFHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIK 796

Query:   316 NEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNT--- 372
             N  +K   I+   K  N LL+TGTPLQN+L ELW+LL+FL+P           WF+    
Sbjct:   797 NFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLN 856

Query:   373 ---EEFMGDHS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
                E+    HS  +I+RLH+V++P++LRRLK  VEK +  K E  +   L++ Q+  Y
Sbjct:   857 LAIEKSKIHHSKELIDRLHTVIRPYILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILY 914

 Score = 163 (62.4 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 36/73 (49%), Positives = 50/73 (68%)

Query:     3 EQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADE 62
             + ++++++L   N + K +      P  IK   +RDYQ  GL+W++ LY+N INGILADE
Sbjct:   634 DSDDNDDILT-CNMDEKHLTKI---PPIIKA-TLRDYQHAGLHWLLYLYKNNINGILADE 688

Query:    63 MGLGKTLQTISLL 75
             MGLGKTLQ ISLL
Sbjct:   689 MGLGKTLQCISLL 701


>UNIPROTKB|C0H4W3 [details] [associations]
            symbol:PF08_0048 "Probable ATP-dependent helicase
            PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0016020
            "membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
            EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
            EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
        Length = 2082

 Score = 589 (212.4 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 124/298 (41%), Positives = 180/298 (60%)

Query:   136 NVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISL 195
             N D +++ H+    + D+ L  N + +  T +     P  IK   +RDYQ  GL+W++ L
Sbjct:   623 NNDDNNNEHKNDSDDNDDILTCNMDEKHLTKI-----PPIIKA-TLRDYQHAGLHWLLYL 676

Query:   196 YENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPT 255
             Y+N INGILADEMGLGKTLQ ISLL Y+ +Y NI GPH+VIVP S L+NW  E K++CP 
Sbjct:   677 YKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPTSILINWEIELKRFCPC 736

Query:   256 LRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIK 315
              + +   G+Q+ R            + +CI+SY   +++  VFK+  W+Y+++DEAH IK
Sbjct:   737 FKILSYYGNQNERYKKRVGWFNKDSFHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIK 796

Query:   316 NEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNT--- 372
             N  +K   I+   K  N LL+TGTPLQN+L ELW+LL+FL+P           WF+    
Sbjct:   797 NFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLN 856

Query:   373 ---EEFMGDHS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
                E+    HS  +I+RLH+V++P++LRRLK  VEK +  K E  +   L++ Q+  Y
Sbjct:   857 LAIEKSKIHHSKELIDRLHTVIRPYILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILY 914

 Score = 163 (62.4 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 36/73 (49%), Positives = 50/73 (68%)

Query:     3 EQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADE 62
             + ++++++L   N + K +      P  IK   +RDYQ  GL+W++ LY+N INGILADE
Sbjct:   634 DSDDNDDILT-CNMDEKHLTKI---PPIIKA-TLRDYQHAGLHWLLYLYKNNINGILADE 688

Query:    63 MGLGKTLQTISLL 75
             MGLGKTLQ ISLL
Sbjct:   689 MGLGKTLQCISLL 701


>UNIPROTKB|F1SC64 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
            OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
            GeneTree:ENSGT00550000075106 EMBL:CU468514
            Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
        Length = 838

 Score = 576 (207.8 bits), Expect = 1.2e-55, P = 1.2e-55
 Identities = 122/276 (44%), Positives = 167/276 (60%)

Query:   167 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 226
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +  M   
Sbjct:   210 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ- 267

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDV-MMPGEWD--- 282
             R + GP +V  P STL NWM EF+++ P +  +   G Q  R  ++  +    G      
Sbjct:   268 RGVPGPFLVCGPLSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNHIHKRKGTLQIHP 327

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             V ITS+E+ +R+R V +   W+YL++DE HRIKN K +L   ++ F   N+LLLTGTPLQ
Sbjct:   328 VVITSFEIAMRDRNVLQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQ 387

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFN-------TEEFMG---DHSIIERLHSVLKPF 392
             NNL ELW+LLNFLLP           WF+        E+ +    + +++  LH +L PF
Sbjct:   388 NNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPF 447

Query:   393 LLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             LLRRLKS+V   + PK+E+ VY  LSK Q  +YT +
Sbjct:   448 LLRRLKSDVALEVPPKREVVVYAPLSKKQEVFYTAI 483

 Score = 165 (63.1 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query:    22 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +   I R
Sbjct:   210 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQR 268


>UNIPROTKB|E1BCV0 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
            OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
            GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
            EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
            Uniprot:E1BCV0
        Length = 816

 Score = 574 (207.1 bits), Expect = 1.2e-55, P = 1.2e-55
 Identities = 122/276 (44%), Positives = 167/276 (60%)

Query:   167 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 226
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +  M   
Sbjct:   188 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ- 245

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVM-MPGEWD--- 282
             R + GP +V  P STL NWM EFK++ P +  +   G Q  R  +++ +    G      
Sbjct:   246 RGVPGPFLVCGPLSTLPNWMAEFKRFTPEIPTMLYHGTQQERRILVKHIHERKGTLQIHP 305

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             V ITS+E+ +R+R   +   W+YL++DE HRIKN K +L   ++ F   N+LLLTGTPLQ
Sbjct:   306 VVITSFEIAMRDRTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQ 365

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFN-------TEEFMG---DHSIIERLHSVLKPF 392
             NNL ELW+LLNFLLP           WF+        E+ +    + +++  LH +L PF
Sbjct:   366 NNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPF 425

Query:   393 LLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             LLRRLKS+V   + PK+E+ VY  LSK Q  +YT +
Sbjct:   426 LLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAI 461

 Score = 165 (63.1 bits), Expect = 7.2e-09, P = 7.2e-09
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query:    22 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +   I R
Sbjct:   188 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQR 246


>FB|FBgn0020306 [details] [associations]
            symbol:dom "domino" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
            proliferation" evidence=NAS] [GO:0016458 "gene silencing"
            evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] [GO:0002165 "instar larval or pupal development"
            evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
            [GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
            proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
            evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
            mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
            acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
            "wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
            regulation of gene expression" evidence=IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0070983 "dendrite guidance"
            evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
            "positive regulation of gene silencing by miRNA" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
            GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
            GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
            GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
            GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
            PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
            EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
            ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
            PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
            KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
            GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
            OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
            NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
            Uniprot:Q9NDJ2
        Length = 3198

 Score = 584 (210.6 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
 Identities = 121/280 (43%), Positives = 171/280 (61%)

Query:   153 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 212
             E L    NT   T V     PF +K   +R+YQ  GL+W++++ E  +NGILADEMGLGK
Sbjct:   888 ESLQPKGNTLSSTNV-VTPVPFLLKHS-LREYQHIGLDWLVTMNERKLNGILADEMGLGK 945

Query:   213 TLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMI 272
             T+QTI+LL ++   +   GPH+++VP S +LNW  EFKKWCP  + +   G Q  R    
Sbjct:   946 TIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKR 1005

Query:   273 RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
                  P  + VCITSY++ ++++  F++  W+YL++DEA  IKN KS+  +++  F T  
Sbjct:  1006 VGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTER 1065

Query:   333 RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMGD----HSIIERL 385
             RLLLTGTPLQN+L ELW+L++FL+P           WF+   T    G+     ++I RL
Sbjct:  1066 RLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRL 1125

Query:   386 HSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             H V++PFLLRRLK EVEK++  K E  +   LS  QR  Y
Sbjct:  1126 HKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLY 1165

 Score = 152 (58.6 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E L    NT   T V     PF +K   +R+YQ  GL+W++++ E  +NGILADEMGLGK
Sbjct:   888 ESLQPKGNTLSSTNV-VTPVPFLLKHS-LREYQHIGLDWLVTMNERKLNGILADEMGLGK 945

Query:    68 TLQTISLL 75
             T+QTI+LL
Sbjct:   946 TIQTIALL 953

 Score = 49 (22.3 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query:   275 VMMPGE---WDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTT 331
             ++ PG+   WD+       C +     ++  WRY    E H    E+ K+ E  ++ K  
Sbjct:  2168 LLSPGQTPNWDLVSEMVNFCSKTYRSARQCRWRY----ETHIQPREEGKVVESPKKQKKL 2223

Query:   332 NRLLLT 337
                L T
Sbjct:  2224 KPTLRT 2229

 Score = 42 (19.8 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             LT  K+  D  D R   +  E+DEE +A A  +   +
Sbjct:   649 LTSPKRESD-DDFRPE-SGSEDDEETIAKAEEDAADV 683

 Score = 40 (19.1 bits), Expect = 2.1e-55, Sum P(2) = 2.1e-55
 Identities = 7/27 (25%), Positives = 16/27 (59%)

Query:   129 SLTKEKKNVDPSDHRHRMTEQEEDEEL 155
             +++K+++     DH+  + E E D +L
Sbjct:   750 TISKQEEAEQEIDHKKEIDELEADNDL 776

 Score = 40 (19.1 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query:   133 EKKNVDPSDHRHRMTEQEEDEELLANANTE-GKTIVSF-ENSP 173
             EK+++   +H     E E+D +    A  E    +  F EN P
Sbjct:  1863 EKQSLRAFEHALAAAEDEQDVQATKTAKAEVAADLAEFDENIP 1905

 Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query:   321 LSEIVREFKTTNRLLLTGTPLQNNLHELWALLNF 354
             +  ++R+ K     +L  T +   L  L A LN+
Sbjct:  1663 MDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNY 1696


>CGD|CAL0001763 [details] [associations]
            symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
            "Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
            activity" evidence=IEA] [GO:0043486 "histone exchange"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
            RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
            PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
            KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
        Length = 1641

 Score = 491 (177.9 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
 Identities = 94/197 (47%), Positives = 125/197 (63%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G +R YQ +GLNW+ SLY N  NGILADEMGLGKT+QTISLL Y+    +  GPH++IVP
Sbjct:   821 GTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHLIIVP 880

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              S +LNW  EFKK+ P  + +   G    R    +    P  + VCITSY++ ++++  F
Sbjct:   881 TSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWNKPDAFHVCITSYQLVVQDQQSF 940

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPX 358
             K+  W Y+++DEAH IKN +S     +  F T NRLLLTGTPLQNNL ELW+LL FL+P 
Sbjct:   941 KRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMELWSLLYFLMPS 1000

Query:   359 XXXXXXXXXXWFNTEEF 375
                       + N ++F
Sbjct:  1001 SKVNQAMPEGFANLDDF 1017

 Score = 164 (62.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
 Identities = 31/42 (73%), Positives = 35/42 (83%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G +R YQ +GLNW+ SLY N  NGILADEMGLGKT+QTISLL
Sbjct:   821 GTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLL 862

 Score = 116 (45.9 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
 Identities = 25/44 (56%), Positives = 31/44 (70%)

Query:   382 IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             + RLH VL+P+LLRRLK +VEK++  K E  VY  LSK QR  Y
Sbjct:  1058 VARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLY 1101

 Score = 37 (18.1 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
 Identities = 26/93 (27%), Positives = 43/93 (46%)

Query:     4 QEEDEELLANANTEGKTIVSFENSPF---YIKGGEMRDYQ-VRG-LNWMISLYENGINGI 58
             Q +DE + A   TE   + +F N+ F    I    + DY   R   N ++S  E  +   
Sbjct:   317 QLKDEVIAAPKLTE--KLQNFLNNDFKTPIIDESNVPDYNFTRDEYNTIMSQQEKLLRK- 373

Query:    59 LADEMGLGKTLQTISLLGPKIDRFDYLLKQTEI 91
             L  ++ +  +L+   L G KI+R   +L Q+ I
Sbjct:   374 LYHKVNIENSLE---LNGDKIERRKVILPQSNI 403


>RGD|1302988 [details] [associations]
            symbol:Smarca2 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 2"
            species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
            evidence=ISO] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
            evidence=ISO] [GO:0030308 "negative regulation of cell growth"
            evidence=ISO] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=ISO] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=ISO]
            [GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
            complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
            OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
            RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
            SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
            UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
            Genevestigator:Q6DUH4 Uniprot:Q6DUH4
        Length = 1597

 Score = 577 (208.2 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
 Identities = 125/318 (39%), Positives = 180/318 (56%)

Query:   130 LTKEKKNVDPSDHRH--RMTEQEEDEELLANANTEGK----TI---VS--FENSPFYIKG 178
             L    K V   D R      +Q+ D+E     +  G     T+   +S   E     +  
Sbjct:   669 LDPNSKEVSEKDARQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLIN 728

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G ++ YQ++GL WM+SLY N +NGILADEMG GKT+QTI+L+ Y+  ++ + GP+++IVP
Sbjct:   729 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYLMEHKGLNGPYLIIVP 788

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
              STL NW  EF KW P+   I   G    R +++   +  G+++  +T+YE  I+++ + 
Sbjct:   789 LSTLSNWTYEFDKWAPSAVKISYKGTPAMRRSLVPQ-LRSGKFNALLTTYEYIIKDKHIL 847

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVR-EFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
              K  W+Y+++DE HR+KN   KL++++   +    R+LLTGTPLQN L ELWALLNFLLP
Sbjct:   848 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 907

Query:   358 XXXXXXXXXXXWFNTEEFM-GDHS---------IIERLHSVLKPFLLRRLKSEVEKRLKP 407
                        WFN    M G+           II RLH VL+PFLLRRLK EVE +L  
Sbjct:   908 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 967

Query:   408 KKELKVYVGLSKMQREWY 425
             K E  +   +S +Q+  Y
Sbjct:   968 KVEYVIKCDMSALQKILY 985

 Score = 156 (60.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
 Identities = 27/42 (64%), Positives = 36/42 (85%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             G ++ YQ++GL WM+SLY N +NGILADEMG GKT+QTI+L+
Sbjct:   729 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALI 770

 Score = 40 (19.1 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    74 LLGPKIDR-FDYLLKQTEIFSHFMTN 98
             L+  K DR   YLL+QT+ +   +TN
Sbjct:   524 LIDQKKDRRLAYLLQQTDEYVANLTN 549

 Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTI 166
             + KE+++ + S+      E+EEDEE    +  E K++
Sbjct:  1513 IAKEEESEEESNEE----EEEEDEE---ESEAEAKSV 1542


>POMBASE|SPAC1250.01 [details] [associations]
            symbol:snf21 "ATP-dependent DNA helicase Snf21"
            species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
            chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
            transcription factor activity" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
            remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
            GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
            KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
            ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
            EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
            OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
        Length = 1199

 Score = 582 (209.9 bits), Expect = 1.9e-55, P = 1.9e-55
 Identities = 126/295 (42%), Positives = 177/295 (60%)

Query:   145 RMTEQEEDEEL-LANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGI 203
             R    E+D ++   N     + +V+    P  + GG++++YQ+RGL WMISLY N +NGI
Sbjct:   382 RRMNPEDDRKIDYYNVAHNIREVVT--EQPSILVGGKLKEYQLRGLQWMISLYNNHLNGI 439

Query:   204 LADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIG 263
             LADEMGLGKT+QTISL+ ++   +   GP +VIVP STL NW  EF++W P++  I   G
Sbjct:   440 LADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKG 499

Query:   264 DQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSE 323
                 R A+   V     + V +T+YE  I++R +  +  W Y++IDE HR+KN +SKL+ 
Sbjct:   500 PPQVRKALHPQVRH-SNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTN 558

Query:   324 IVREFKTTN-RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTE--------- 373
              +  + ++  RL+LTGTPLQNNL ELWALLNF+LP           WFNT          
Sbjct:   559 TLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDK 618

Query:   374 -EFMGDHS--IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
              E   + S  +I RLH VL+PFLLRRLK +VE  L  K E  +   +S +Q++ Y
Sbjct:   619 MELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLY 673

 Score = 186 (70.5 bits), Expect = 5.6e-11, P = 5.6e-11
 Identities = 34/54 (62%), Positives = 45/54 (83%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             P  + GG++++YQ+RGL WMISLY N +NGILADEMGLGKT+QTISL+   I++
Sbjct:   409 PSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEK 462


>UNIPROTKB|E2QW28 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
            GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
            Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
        Length = 839

 Score = 574 (207.1 bits), Expect = 2.0e-55, P = 2.0e-55
 Identities = 121/276 (43%), Positives = 168/276 (60%)

Query:   167 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 226
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +  M   
Sbjct:   211 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ- 268

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDV-MMPGEWD--- 282
             R + GP +V  P STL NWM EF+++ P +  +   G Q  R  +++++    G      
Sbjct:   269 RGVPGPFLVCGPLSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIHKRKGTLQIHP 328

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             V ITS+E+ +R+R   +   W+YL++DE HRIKN K +L   ++ F   N+LLLTGTPLQ
Sbjct:   329 VVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQ 388

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFN-------TEEFMG---DHSIIERLHSVLKPF 392
             NNL ELW+LLNFLLP           WF+        E+ +    + +++  LH +L PF
Sbjct:   389 NNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPF 448

Query:   393 LLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             LLRRLKS+V   + PK+E+ VY  LSK Q  +YT +
Sbjct:   449 LLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAI 484

 Score = 165 (63.1 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query:    22 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +   I R
Sbjct:   211 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQR 269


>SGD|S000001934 [details] [associations]
            symbol:IRC5 "Putative ATPase containing the DEAD/H
            helicase-related sequence motif" species:4932 "Saccharomyces
            cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
            RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
            DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
            PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
            CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
            Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
        Length = 853

 Score = 508 (183.9 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
 Identities = 112/290 (38%), Positives = 169/290 (58%)

Query:   131 TKEKKNVDPSDH--RHRMTEQEEDEELLA----NANT---EGKTIVSFENSPFYIKGGEM 181
             TK+  N D  +H  + R T+++   +       N +T    G    +    P  +K   +
Sbjct:   163 TKDNSNSDDEEHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCIL 222

Query:   182 RDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKST 241
             + YQ+ GLNW+I+LYENG+NGILADEMGLGKT+Q+I+LL ++ +  +  GP +V  P ST
Sbjct:   223 KPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFI-YEMDTKGPFLVTAPLST 281

Query:   242 LLNWMNEFKKWCPTLRAICLIGDQD--ARNAMIRDVMMP-GEWDVCITSYEMCIRERGVF 298
             L NWMNEF K+ P L  +   G      R+A +++     G   + ITSYE+ +R+  + 
Sbjct:   282 LDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLI 341

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPX 358
                NW++L++DE HR+KN   +L + +++  T+NRLLLTGTPLQNNL ELW+LLNF++P 
Sbjct:   342 MSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPD 401

Query:   359 XXXXXXXXXXWFNTEEF-MGDHSIIERLHSVLKPFLLRRLKSEVEKRLKP 407
                       WF+ +   +G  S  E L+ ++   L + L S +   LKP
Sbjct:   402 IFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKP 451

 Score = 170 (64.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
 Identities = 31/48 (64%), Positives = 41/48 (85%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             P  +K   ++ YQ+ GLNW+I+LYENG+NGILADEMGLGKT+Q+I+LL
Sbjct:   214 PRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALL 261

 Score = 93 (37.8 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query:   380 SIIERLHSVLKPFLLRRLKSEVEKR-LKPKKELKVYVGLSKMQREWY 425
             ++I  LH++LKPFLLRRLK  V    L PK+E  +   ++  Q ++Y
Sbjct:   440 NLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFY 486


>DICTYBASE|DDB_G0267638 [details] [associations]
            symbol:DDB_G0267638 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
            GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
            ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
            KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
        Length = 3069

 Score = 587 (211.7 bits), Expect = 3.2e-55, P = 3.2e-55
 Identities = 120/260 (46%), Positives = 163/260 (62%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             PF +K   +R+YQ  GL+W++SLYE  +NGILADEMGLGKT+ TISL+ Y+   + + GP
Sbjct:   774 PFLLKF-PLREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTISLIAYLAVQKGVWGP 832

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
             H+++VP S L NW  EFK+WCP L+     G    R A  +       + VCITSY M +
Sbjct:   833 HLIVVPSSVLFNWEMEFKRWCPGLKIFTYHGTSRDRKANRKGWSKSNAFHVCITSYSMVM 892

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALL 352
              +  +F++  W Y+++DEAH IKN K++  + +  F T  RLLLTGTPLQNNL ELW+L+
Sbjct:   893 SDHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLTGTPLQNNLMELWSLM 952

Query:   353 NFLLPXXXXXXXXXXXWF-NTEEFM---GD---HSIIERLHSVLKPFLLRRLKSEVEKRL 405
             +FL+P           WF N    M   GD     II RLH+VL+PFLLRRLK +VEK++
Sbjct:   953 HFLMPDIFQSHREFQDWFSNPVTGMIEGGDDVNEDIINRLHAVLRPFLLRRLKKDVEKQM 1012

Query:   406 KPKKELKVYVGLSKMQREWY 425
              PK    V   +S+ Q+  Y
Sbjct:  1013 PPKHTHIVPCSMSRRQKFLY 1032

 Score = 157 (60.3 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
 Identities = 30/48 (62%), Positives = 39/48 (81%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             PF +K   +R+YQ  GL+W++SLYE  +NGILADEMGLGKT+ TISL+
Sbjct:   774 PFLLKF-PLREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTISLI 820

 Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query:   394 LRRLKSEVEKRLKPKKELKVY 414
             + + K E E+R K K++ K++
Sbjct:  2124 IEKAKQEEERRAKEKRDQKIH 2144

 Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             KEK+N + +++ +   E+E+D E
Sbjct:  1743 KEKENENENENENE-NEKEKDNE 1764

 Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query:   302 NWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             N++  +I   H  +   +  S+I  EFK  N
Sbjct:  1907 NFQNKLISPDHNFRKNINSTSKIKSEFKEDN 1937


>UNIPROTKB|F1P5V4 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
            heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
            chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
            methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
            assembly" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
            proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
            GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
            EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
            Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
        Length = 839

 Score = 572 (206.4 bits), Expect = 3.4e-55, P = 3.4e-55
 Identities = 122/276 (44%), Positives = 166/276 (60%)

Query:   167 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 226
             V F+  P    GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +  M   
Sbjct:   209 VPFQQ-PKIFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIALMVE- 266

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVM-MPGEWD--- 282
             R + GP +V  P STL NWM+EFK++ P +  +   G Q  R  ++R +    G      
Sbjct:   267 RGVPGPFLVCGPLSTLPNWMSEFKRFTPEIPLMLYHGAQQERRKLVRKIHGRQGSLKIHP 326

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             V ITS+E+ +R+R   +   W+YL++DE HRIKN   +L   ++ F   N+LLLTGTPLQ
Sbjct:   327 VVITSFEIAMRDRNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRFNADNKLLLTGTPLQ 386

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFN-------TEEFMG---DHSIIERLHSVLKPF 392
             NNL ELW+LLNFLLP           WF+        E+ +    + +I+  LH +L PF
Sbjct:   387 NNLAELWSLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEKEQNILHMLHQILTPF 446

Query:   393 LLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             LLRRLKS+V   + PK+E+ VY  L+K Q  +YT +
Sbjct:   447 LLRRLKSDVALEVPPKREVVVYAPLAKKQETFYTAI 482

 Score = 164 (62.8 bits), Expect = 9.6e-09, P = 9.6e-09
 Identities = 33/60 (55%), Positives = 42/60 (70%)

Query:    22 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             V F+  P    GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +   ++R
Sbjct:   209 VPFQQ-PKIFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIALMVER 267


>RGD|1565642 [details] [associations]
            symbol:Srcap "Snf2-related CREBBP activator protein"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
            [GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
            GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
            IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
            ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
        Length = 3182

 Score = 586 (211.3 bits), Expect = 4.2e-55, P = 4.2e-55
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   612 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 665

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   666 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 725

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   726 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 785

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   786 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 845

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   846 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 879

 Score = 161 (61.7 bits), Expect = 9.8e-08, P = 9.8e-08
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   612 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 665

Query:    74 LL 75
             LL
Sbjct:   666 LL 667


>UNIPROTKB|Q6ZRS2 [details] [associations]
            symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
            "protein complex" evidence=IDA] [GO:0003713 "transcription
            coactivator activity" evidence=TAS] [GO:0004402 "histone
            acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=TAS]
            [GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
            GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
            PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
            GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
            EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
            EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
            RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
            SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
            PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
            DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
            Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
            KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
            GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
            HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
            Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
            InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
            ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
            Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
        Length = 3230

 Score = 586 (211.3 bits), Expect = 4.3e-55, P = 4.3e-55
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   602 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 655

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   656 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 715

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   716 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 775

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   776 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 835

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   836 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 869

 Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   602 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 655

Query:    74 LL 75
             LL
Sbjct:   656 LL 657


>UNIPROTKB|E1BC33 [details] [associations]
            symbol:LOC788113 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
            PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
            EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
            Uniprot:E1BC33
        Length = 3242

 Score = 586 (211.3 bits), Expect = 4.3e-55, P = 4.3e-55
 Identities = 119/274 (43%), Positives = 174/274 (63%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   610 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 663

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL ++   +   GPH++IVP S +LNW  E K+WCP+ + +   G Q  R    +    P
Sbjct:   664 LLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKP 723

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + VCITSY++ +++   F++ NWRYL++DEA  IKN KS+  + +  F +  RLLLTG
Sbjct:   724 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 783

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN---TEEFMG----DHSIIERLHSVLKP 391
             TPLQN+L ELW+L++FL+P           WF+   T    G    +  +++RLH VL+P
Sbjct:   784 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 843

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             FLLRR+K +VEK++  K E  +   LSK QR  Y
Sbjct:   844 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 877

 Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A T+ KT +     P  ++G ++R+YQ  GL+W++++YE  +NGILADEMGLGKT+QTIS
Sbjct:   610 ATTQVKTPI-----PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTIS 663

Query:    74 LL 75
             LL
Sbjct:   664 LL 665


>DICTYBASE|DDB_G0292358 [details] [associations]
            symbol:ino80 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
            repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
            GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
            GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
            STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
            GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
            ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
        Length = 2129

 Score = 553 (199.7 bits), Expect = 4.8e-55, Sum P(2) = 4.8e-55
 Identities = 108/268 (40%), Positives = 165/268 (61%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I   +++ YQ++G+ W+++LY+ GINGILADEMGLGKT+Q+I++L ++   +NI GP ++
Sbjct:  1157 ILNADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIAVLAHLAEEKNIWGPFLI 1216

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE-------WDVCITSY 288
             + PKSTL NW NEF K+ P  + I   G Q  R   IR    P +       + V ITSY
Sbjct:  1217 VTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTT-IRKYWNPKKLYHRNSPFHVLITSY 1275

Query:   289 EMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHEL 348
              + +R+   F +  W+Y+V+DEAH IK+  S   + +  F   NRLLLTGTP+QN++ EL
Sbjct:  1276 NVIVRDEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSFNCRNRLLLTGTPIQNSMAEL 1335

Query:   349 WALLNFLLPXXXXXXXXXXXWFN--------TEEFMGDHSIIERLHSVLKPFLLRRLKSE 400
             WALL+F++P           WF+        ++  + +H +  RLH +LKPF+LRR+K +
Sbjct:  1336 WALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQL-NRLHMILKPFMLRRIKRD 1394

Query:   401 VEKRLKPKKELKVYVGLSKMQREWYTKV 428
             VE  +  K E++VY  L+  Q++ Y  +
Sbjct:  1395 VENEMPSKTEVEVYCNLTHRQKKLYQSI 1422

 Score = 153 (58.9 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 25/45 (55%), Positives = 39/45 (86%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             I   +++ YQ++G+ W+++LY+ GINGILADEMGLGKT+Q+I++L
Sbjct:  1157 ILNADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIAVL 1201

 Score = 63 (27.2 bits), Expect = 4.8e-55, Sum P(2) = 4.8e-55
 Identities = 20/85 (23%), Positives = 37/85 (43%)

Query:    81 RFDYLLKQTEIFSHFMTNQGVXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTKEKKNVDPS 140
             + ++L+ QTE++SHFM+ + +                              KEK + D +
Sbjct:   992 KLNFLISQTELYSHFMSKK-LDDPSSGDATPATIGSLMNGSQMPTEQNKKIKEKNDQDDN 1050

Query:   141 DHRHRMTEQEEDEELLANANTEGKT 165
             +     +  EE+EE   +++ EGKT
Sbjct:  1051 E-----SSSEEEEE---SSDDEGKT 1067


>DICTYBASE|DDB_G0267556 [details] [associations]
            symbol:DDB_G0267556 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
            GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
            EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
            InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
            Uniprot:Q55GQ9
        Length = 1159

 Score = 549 (198.3 bits), Expect = 8.1e-55, Sum P(2) = 8.1e-55
 Identities = 118/256 (46%), Positives = 159/256 (62%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             MR+YQ+ GLNWM  LY+  INGILADEMGLGKT+QTISLL ++K   N  GPH+V+VP +
Sbjct:   542 MRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHIKEAYNDNGPHLVVVPAT 601

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMM--PG-EWDVCITSYEMCI--RER 295
              L NW  EF+ WCP+L  +   G+   R  +  ++    PG +++V +T+Y +     +R
Sbjct:   602 ILANWEREFQTWCPSLSIVRYYGNLREREELRYELKKKRPGKDFNVILTTYNLLFANNDR 661

Query:   296 GVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFL 355
             G  K+F++ +L++DEA  IKN  SK  + + +    +RLLLTGTPLQNNL+ELW+LLNFL
Sbjct:   662 GFLKRFDYSFLILDEAQNIKNSDSKRYKNIFKIGAHHRLLLTGTPLQNNLYELWSLLNFL 721

Query:   356 LPXXXXXXXXXXXWFNTE-EFMGDH--SIIERLHSVLKPFLLRRLKSEVEKRLKPKKELK 412
             +P             N   E+ GD   S I R+  +L PF+LRRLKS V K LKPK E  
Sbjct:   722 MPHIFGSVKKDNYLLNQLLEYNGDDCDSAITRMKKILSPFILRRLKSTVSKELKPKIEHV 781

Query:   413 VYVGLSKMQREWYTKV 428
                 L K Q E Y  +
Sbjct:   782 EICKLPKFQDETYKNI 797

 Score = 157 (60.3 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
 Identities = 31/40 (77%), Positives = 35/40 (87%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             MR+YQ+ GLNWM  LY+  INGILADEMGLGKT+QTISLL
Sbjct:   542 MRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLL 581

 Score = 55 (24.4 bits), Expect = 8.1e-55, Sum P(2) = 8.1e-55
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELL 156
             L KE K VD SD      E+EE+EE+L
Sbjct:   356 LKKETKKVDDSDTED--DEEEEEEEVL 380

 Score = 42 (19.8 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query:   132 KEKKNV--DPSDHRHRMTEQEEDEELLANANTE 162
             K+ K V  D  D      E +EDE  L N + E
Sbjct:   106 KQSKKVEEDEEDEDEEDEEDDEDEFNLPNVSVE 138

 Score = 38 (18.4 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query:   312 HRIKNEKSKLSEIVREFKTTN 332
             H   N+K KL++ V E  T N
Sbjct:  1119 HESANQKKKLNDNVLEEGTFN 1139


>TAIR|locus:2062840 [details] [associations]
            symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
            boundary specification between lateral organs and the meristem"
            evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=NAS] [GO:0040029 "regulation of gene expression,
            epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
            evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
            "microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
            "cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
            "DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
            evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
            [GO:0009616 "virus induced gene silencing" evidence=RCA]
            [GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=RCA] [GO:0009845
            "seed germination" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0009933 "meristem structural
            organization" evidence=RCA] [GO:0010162 "seed dormancy process"
            evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0010267 "production of
            ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
            "protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
            evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=RCA] [GO:0050826 "response to
            freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
            GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
            PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
            PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
            KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
        Length = 3574

 Score = 579 (208.9 bits), Expect = 2.7e-54, P = 2.7e-54
 Identities = 124/304 (40%), Positives = 175/304 (57%)

Query:   135 KNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMIS 194
             +N D SD      E  E   L+A++  E     +    P  + GG++R+YQ+ GL W++S
Sbjct:   713 ENEDESDQAKHYLESNEKYYLMAHSIKE-----NINEQPSSLVGGKLREYQMNGLRWLVS 767

Query:   195 LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCP 254
             LY N +NGILADEMGLGKT+Q ISL+ Y+   +N  GP +V+VP S L  W +E   W P
Sbjct:   768 LYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAP 827

Query:   255 TLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR--ERGVFKKFNWRYLVIDEAH 312
             ++  I   G  D R  + ++ ++  +++V +T+YE  +   +R    K +W Y++IDE H
Sbjct:   828 SIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGH 887

Query:   313 RIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNT 372
             RIKN   KL+  ++ + +++RLLLTGTPLQNNL ELWALLNFLLP           WFN 
Sbjct:   888 RIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNK 947

Query:   373 E-EFMGDHS-------------IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLS 418
               +  G+ S             II RLH VL+PF+LRRLK +VE  L  K E  +    S
Sbjct:   948 PFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEAS 1007

Query:   419 KMQR 422
               Q+
Sbjct:  1008 AYQK 1011

 Score = 173 (66.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 35/73 (47%), Positives = 49/73 (67%)

Query:     3 EQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADE 62
             E  E   L+A++  E     +    P  + GG++R+YQ+ GL W++SLY N +NGILADE
Sbjct:   726 ESNEKYYLMAHSIKE-----NINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADE 780

Query:    63 MGLGKTLQTISLL 75
             MGLGKT+Q ISL+
Sbjct:   781 MGLGKTVQVISLI 793

 Score = 45 (20.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query:   129 SLTKEKKNVDPSDHRHRMTEQEEDEELLANANTE 162
             S++  +KN++  D  H  T   E  ++ A  +TE
Sbjct:  2955 SISAVQKNIEDKDQSHVETAGSELVDVSAECSTE 2988

 Score = 44 (20.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
 Identities = 15/50 (30%), Positives = 22/50 (44%)

Query:   129 SLTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKG 178
             SLT E+ N++  DH     E  E E +  +     +  V F  SP  + G
Sbjct:  3457 SLTVEQTNIEEKDH----IETAECELVDVSPGCSSQPEVKFPPSPDAVGG 3502

 Score = 39 (18.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query:   139 PSDHRHRMTEQEEDEELLANANTEGKTIVSFE-NSP 173
             PSD    M+ Q  D  L  ++   G T+ + E N P
Sbjct:  1724 PSDATLPMSSQPSDATLPMSSQPVGSTVEAQEANVP 1759


>MGI|MGI:106209 [details] [associations]
            symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000775 "chromosome, centromeric region" evidence=IDA]
            [GO:0001655 "urogenital system development" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005721 "centromeric heterochromatin"
            evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
            [GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
            "mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IMP] [GO:0010216 "maintenance of DNA
            methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0030098 "lymphocyte differentiation"
            evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
            GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
            GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
            GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
            GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
            OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
            EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
            IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
            UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
            SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
            STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
            DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
            UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
            NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
            GermOnline:ENSMUSG00000025001 Uniprot:Q60848
        Length = 821

 Score = 561 (202.5 bits), Expect = 4.7e-54, P = 4.7e-54
 Identities = 117/276 (42%), Positives = 167/276 (60%)

Query:   167 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 226
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +  M   
Sbjct:   193 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ- 250

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDV-MMPGEWD--- 282
             R + GP +V  P STL NWM EFK++ P +  +   G ++ R  +++++    G      
Sbjct:   251 RGVPGPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHP 310

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             V +TS+E+ +R++   +   W+YL++DE HRIKN K +L   ++ F   N+LLLTGTPLQ
Sbjct:   311 VVVTSFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQ 370

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFN-------TEEFMG---DHSIIERLHSVLKPF 392
             NNL ELW+LLNFLLP           WF+        E+ +    + +++  LH +L PF
Sbjct:   371 NNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPF 430

Query:   393 LLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             LLRRLKS+V   + PK+E+ VY  L   Q  +YT +
Sbjct:   431 LLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAI 466

 Score = 165 (63.1 bits), Expect = 7.2e-09, P = 7.2e-09
 Identities = 34/60 (56%), Positives = 42/60 (70%)

Query:    22 VSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             V F+  P +  GG MR YQV G+ W+  L+ENGINGILADEMGLGKT+Q I+ +   I R
Sbjct:   193 VPFQQ-PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQR 251


>SGD|S000000966 [details] [associations]
            symbol:CHD1 "Chromatin remodeler that regulates various
            aspects of transcription" species:4932 "Saccharomyces cerevisiae"
            [GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
            "nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
            complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IDA] [GO:0001178 "regulation of transcriptional start site
            selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
            "negative regulation of histone H3-K9 acetylation" evidence=IMP]
            [GO:0071441 "negative regulation of histone H3-K14 acetylation"
            evidence=IMP] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
            chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
            evidence=IDA] [GO:0016584 "nucleosome positioning"
            evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
            lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0035064 "methylated histone residue binding" evidence=IDA]
            [GO:2000104 "negative regulation of DNA-dependent DNA replication"
            evidence=IGI] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
            GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
            GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
            GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
            PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
            PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
            ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
            MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
            EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
            OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
            EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
            GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
            GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
        Length = 1468

 Score = 562 (202.9 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
 Identities = 115/266 (43%), Positives = 170/266 (63%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P +IKGGE+RD+Q+ G+NWM  L+  G NGILADEMGLGKT+QT++ + ++   R   GP
Sbjct:   368 PPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGP 427

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMM---P---GE----WD 282
             HI++VP ST+  W++ F+KW P L  IC +G+Q +R+  IR+      P   G+    ++
Sbjct:   428 HIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDT-IREYEFYTNPRAKGKKTMKFN 486

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             V +T+YE  +++R       W+++ +DEAHR+KN +S L E +  FK  NR+L+TGTPLQ
Sbjct:   487 VLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQ 546

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVE 402
             NN+ EL AL+NFL+P           + N +E   ++  I  LH  ++PF+LRRLK +VE
Sbjct:   547 NNIKELAALVNFLMPGRFTIDQEID-FENQDEEQEEY--IHDLHRRIQPFILRRLKKDVE 603

Query:   403 KRLKPKKELKVYVGLSKMQREWYTKV 428
             K L  K E  + V LS +Q E+Y  +
Sbjct:   604 KSLPSKTERILRVELSDVQTEYYKNI 629

 Score = 172 (65.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
 Identities = 30/48 (62%), Positives = 40/48 (83%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             P +IKGGE+RD+Q+ G+NWM  L+  G NGILADEMGLGKT+QT++ +
Sbjct:   368 PPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFI 415

 Score = 39 (18.8 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query:   133 EKKNVDPSDHRHRMTEQEEDEE 154
             ++ N+  S  R RMT  E+DE+
Sbjct:    41 DEDNIKQS-RRKRMTTIEDDED 61

 Score = 38 (18.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query:   241 TLLNWMNEFKK 251
             +LLN MNE KK
Sbjct:   647 SLLNIMNELKK 657


>POMBASE|SPAC11E3.01c [details] [associations]
            symbol:swr1 "SNF2 family helicase Swr1" species:4896
            "Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
            "ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
            EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
            OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
            ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
            GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
            Uniprot:O13682
        Length = 1288

 Score = 465 (168.7 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
 Identities = 86/185 (46%), Positives = 124/185 (67%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             PF  +G  +R+YQ  GL W+ +L+++  NGILADEMGLGKT+QTI+LL ++   +   GP
Sbjct:   440 PFLFRG-TLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGP 498

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
             H++IVP S +LNW  EFKK+ P  + +   G+   R         P  W VCITSY++ +
Sbjct:   499 HLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQLVL 558

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALL 352
             ++   F++  W+Y+++DEAH IKN +S+  + +  F   +RLLLTGTPLQNNL ELW+LL
Sbjct:   559 QDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELWSLL 618

Query:   353 NFLLP 357
              FL+P
Sbjct:   619 YFLMP 623

 Score = 149 (57.5 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
 Identities = 28/48 (58%), Positives = 38/48 (79%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             PF  +G  +R+YQ  GL W+ +L+++  NGILADEMGLGKT+QTI+LL
Sbjct:   440 PFLFRG-TLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALL 486

 Score = 118 (46.6 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query:   382 IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             + +LH VL+P+LLRRLK+EVEK++  K E  VY  LSK QR  Y
Sbjct:   665 VAKLHRVLRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLY 708

 Score = 38 (18.4 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query:   129 SLTKEKKNVDPSDHRHRMTEQEE--DEELLANANTEGKTI 166
             ++ +E++  + SD     +E EE  DE++   +N   + +
Sbjct:   275 NIEREEEAEETSDDEPLSSEDEENEDEDITEESNLRKRKV 314

 Score = 37 (18.1 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query:   143 RHRMTEQEEDEELLANANTEGKTIVSFENSP 173
             RHR+ E  +     A A  E K   S  N P
Sbjct:    84 RHRINEFRKKGYFTAEAPVELKKAPSSNNIP 114


>DICTYBASE|DDB_G0284171 [details] [associations]
            symbol:DDB_G0284171 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
            KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
            STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
            KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
            ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
        Length = 1917

 Score = 567 (204.7 bits), Expect = 2.1e-53, P = 2.1e-53
 Identities = 114/265 (43%), Positives = 167/265 (63%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             +  P +I  G +RDYQ+ GLNW++  + N  N ILADEMGLGKT+QTIS L Y+ + ++I
Sbjct:   744 DTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQDI 803

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR-----DVMMPGE---- 280
              GP +V+VP ST+ NW  EF KW P +  I   G   +R+ +IR          G+    
Sbjct:   804 KGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRD-IIRLYEFYTTNRLGKKKLN 862

Query:   281 WDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 340
             ++V +T+Y+  ++++       W +L +DEAHR+KN +S L E+++ + TTNRLL+TGTP
Sbjct:   863 FNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLYNTTNRLLVTGTP 922

Query:   341 LQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSE 400
             LQN+L ELW LLNFL+P            ++    + ++  I +LHSVLKP LLRR+K +
Sbjct:   923 LQNSLKELWNLLNFLMPNKFTSLKDFQDQYSD---LKENDQIAQLHSVLKPHLLRRIKKD 979

Query:   401 VEKRLKPKKELKVYVGLSKMQREWY 425
             VEK L PK E  + V LS +Q+++Y
Sbjct:   980 VEKSLPPKTERILRVDLSNVQKKYY 1004

 Score = 159 (61.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
 Identities = 29/51 (56%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             +  P +I  G +RDYQ+ GLNW++  + N  N ILADEMGLGKT+QTIS L
Sbjct:   744 DTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFL 794

 Score = 64 (27.6 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query:   239 KSTLLNWMNEFKKWC--PTL----RAICLIGDQDARNAMIR 273
             K+TLLN M E KK C  P L    R  C +G +D  ++MIR
Sbjct:  1022 KTTLLNIMTELKKTCNHPYLYQNARDECELGAKDLLDSMIR 1062

 Score = 39 (18.8 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query:   299 KKFNWRYLV-IDEAHRIKNEKSKLSEIVREFKTT 331
             K + W       E ++ K EK+ L  I+ E K T
Sbjct:  1002 KYYKWILTKNFQELNKGKGEKTTLLNIMTELKKT 1035

 Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
 Identities = 8/35 (22%), Positives = 18/35 (51%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKT 165
             +KE K V  ++H ++ T++  + +   N N    +
Sbjct:  1589 SKEIKEVSNNNHNNKETKENNNGDNNNNNNNNNSS 1623


>POMBASE|SPAC1783.05 [details] [associations]
            symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
            region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
            DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=IMP] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
            condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=IDA] [GO:0016592 "mediator complex"
            evidence=IPI] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0035067 "negative
            regulation of histone acetylation" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
            of transcription" evidence=TAS] [GO:0060303 "regulation of
            nucleosome density" evidence=IMP] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
            GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
            GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
            HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
            PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
            MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
            GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
            GO:GO:0060303 Uniprot:Q9US25
        Length = 1373

 Score = 554 (200.1 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 115/266 (43%), Positives = 160/266 (60%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E  P YIKGGE+RD+Q+ G+NWM  L+    NGILADEMGLGKT+QT+  L Y+ H    
Sbjct:   379 EKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQ 438

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMM-------PGEWD 282
              GP +++VP ST+  W      W P L +IC  G+ ++R A IR+            +++
Sbjct:   439 HGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESR-ANIREYEFYLSTNSRKLKFN 497

Query:   283 VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQ 342
             + +T+YE  ++++       W+YL IDEAHR+KN +S L E + +F+T NRLL+TGTPLQ
Sbjct:   498 ILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQ 557

Query:   343 NNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVE 402
             NNL EL +L+NFL+P            F+      +  I + L   L+PF+LRRLK +VE
Sbjct:   558 NNLKELASLVNFLMPGKFYIRDELN--FDQPNAEQERDIRD-LQERLQPFILRRLKKDVE 614

Query:   403 KRLKPKKELKVYVGLSKMQREWYTKV 428
             K L  K E  + V LS MQ EWY  +
Sbjct:   615 KSLPSKSERILRVELSDMQTEWYKNI 640

 Score = 176 (67.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 32/51 (62%), Positives = 39/51 (76%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E  P YIKGGE+RD+Q+ G+NWM  L+    NGILADEMGLGKT+QT+  L
Sbjct:   379 EKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFL 429

 Score = 44 (20.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query:   175 YIKGGEMRDYQVRGLNW 191
             ++K  E+ DY+   LNW
Sbjct:   926 FLKQFEVTDYKAEDLNW 942


>UNIPROTKB|I3LRQ2 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
            Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
        Length = 1051

 Score = 536 (193.7 bits), Expect = 5.6e-52, Sum P(2) = 5.6e-52
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   470 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 529

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   530 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 589

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   590 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 649

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   650 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 705

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   706 DVEKSLPAKVEQILRVEMSALQKQYY 731

 Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   470 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 526

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   527 ----YLFHQHQLYGPFL 539

 Score = 39 (18.8 bits), Expect = 5.6e-52, Sum P(2) = 5.6e-52
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:   143 RHRMTEQEEDEELLANANT 161
             R++   QEED  L +NA++
Sbjct:     2 RNKDKSQEEDSSLHSNASS 20


>ASPGD|ASPL0000047400 [details] [associations]
            symbol:AN2285 species:162425 "Emericella nidulans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
            mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
            silencing at telomere" evidence=IEA] [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043618 "regulation of transcription from RNA
            polymerase II promoter in response to stress" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
            GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
            STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
            KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
            OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
        Length = 1612

 Score = 529 (191.3 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
 Identities = 116/316 (36%), Positives = 181/316 (57%)

Query:   129 SLTKEKKNVDPSDHRHRMT-EQEEDEEL-LANANTEGKTIVSFENSPFYIKGGEMRDYQV 186
             ++ K ++     D  ++ T +  +D EL   N  + G   +S    P  +   ++++YQ+
Sbjct:   748 AVQKAQERARAFDDPNKSTMDTMDDSELNFQNPTSLGDIEIS---QPTMLTA-KLKEYQL 803

Query:   187 RGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWM 246
             +GLNW+++LYE GINGILADEMGLGKT+Q+IS++ Y+    NI GP +VI P STL NW 
Sbjct:   804 KGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQ 863

Query:   247 NEFKKWCPTLRAICLIGDQDARNAMIR--D-----VMMPGEWDVCITSYEMCIRERGVFK 299
              E  K+ P ++ +   G+   R  + +  D          E+ V +TSY++ + +   F+
Sbjct:   864 QEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLVVLDAQYFQ 923

Query:   300 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXX 359
             K  W+Y+++DEA  IK+ +S   + +  F   NRLLLTGTP+QNN+ ELWALL+F++P  
Sbjct:   924 KVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTL 983

Query:   360 XXXXXXXXXWFNTE-EFMGDHSI------IERLHSVLKPFLLRRLKSEVEKRLKPKKELK 412
                      WF+ + E     +       + RLH +LKPF+LRR+K  V++ L  K E  
Sbjct:   984 FDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQELGDKVEKD 1043

Query:   413 VYVGLSKMQREWYTKV 428
             V+  L+  QR  YT +
Sbjct:  1044 VFCDLTYRQRALYTNL 1059

 Score = 167 (63.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 34/71 (47%), Positives = 51/71 (71%)

Query:     6 EDEEL-LANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMG 64
             +D EL   N  + G   +S    P  +   ++++YQ++GLNW+++LYE GINGILADEMG
Sbjct:   771 DDSELNFQNPTSLGDIEIS---QPTMLTA-KLKEYQLKGLNWLVNLYEQGINGILADEMG 826

Query:    65 LGKTLQTISLL 75
             LGKT+Q+IS++
Sbjct:   827 LGKTIQSISVM 837

 Score = 51 (23.0 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
 Identities = 7/16 (43%), Positives = 14/16 (87%)

Query:    81 RFDYLLKQTEIFSHFM 96
             + ++L+ QTE++SHF+
Sbjct:   674 KLNFLISQTELYSHFI 689

 Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:   319 SKLSEIVREFKTT-NRLLL 336
             +KL E++RE K   +R+LL
Sbjct:  1324 AKLDELLRELKAGGHRVLL 1342


>TAIR|locus:2041644 [details] [associations]
            symbol:CHR5 "chromatin remodeling 5" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
            activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
            IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
            EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
            OMA:ARNTKSY Uniprot:F4IV99
        Length = 1724

 Score = 549 (198.3 bits), Expect = 1.4e-51, P = 1.4e-51
 Identities = 110/281 (39%), Positives = 178/281 (63%)

Query:   154 ELLANANTEGK-TIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 212
             +++    T+GK ++   +  P ++ GG +RDYQ+ GLN++++ + N  N ILADEMGLGK
Sbjct:   597 KMVEQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGK 656

Query:   213 TLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMI 272
             T+Q++S+LG++++ + I GP +V+VP STL NW  EF+KW P +  I  +G + +R    
Sbjct:   657 TVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQ 716

Query:   273 -------RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIV 325
                    + V  P +++  +T+YE+ ++++ V  K  W YL++DEAHR+KN +++L   +
Sbjct:   717 QYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTAL 776

Query:   326 REFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWF-NTEEFMGDHSIIER 384
              EF T N+LL+TGTPLQN++ ELWALL+FL P            + N   F  + S +  
Sbjct:   777 LEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSF--NESELAN 834

Query:   385 LHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             LH  L+P +LRR+  +VEK L PK E  + V +S +Q+++Y
Sbjct:   835 LHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYY 875

 Score = 161 (61.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
 Identities = 30/69 (43%), Positives = 50/69 (72%)

Query:     9 ELLANANTEGK-TIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             +++    T+GK ++   +  P ++ GG +RDYQ+ GLN++++ + N  N ILADEMGLGK
Sbjct:   597 KMVEQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGK 656

Query:    68 TLQTISLLG 76
             T+Q++S+LG
Sbjct:   657 TVQSVSMLG 665

 Score = 38 (18.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
 Identities = 6/22 (27%), Positives = 13/22 (59%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDE 153
             ++KK  +P +H  R  ++ + E
Sbjct:  1223 RKKKGSEPPEHTERSQKRRKTE 1244


>CGD|CAL0001390 [details] [associations]
            symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
            complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
            "negative regulation of histone H3-K9 acetylation" evidence=IEA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
            acetylation" evidence=IEA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0006368 "transcription elongation
            from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
            of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
            process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:2000104 "negative regulation of
            DNA-dependent DNA replication" evidence=IEA] [GO:0042766
            "nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
            transcriptional start site selection at RNA polymerase II promoter"
            evidence=IEA] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
            binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
            evidence=IEA] [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
            EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
            RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
            STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
            KEGG:cal:CaO19.3035 Uniprot:Q5AI17
        Length = 1410

 Score = 547 (197.6 bits), Expect = 1.6e-51, P = 1.6e-51
 Identities = 111/261 (42%), Positives = 162/261 (62%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P +IK GE+RD+Q+ GLNWM  L+    NGILADEMGLGKT+QT++ L ++ + R   GP
Sbjct:   354 PVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGP 413

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE-----WDVCITS 287
             H+V+VP ST+  W   F+KW P +  +  +G+ +AR   IR+  +  +     ++V +T+
Sbjct:   414 HLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKT-IREYELYNQNRKPKFNVLLTT 472

Query:   288 YEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 347
             YE  ++++     F W++L +DEAHR+KN +S L E ++ FK +NRLL+TGTPLQNN+ E
Sbjct:   473 YEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNNVKE 532

Query:   348 LWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKP 407
             L AL NFL+P            F T +       I+ L   + PF+LRRLK +VEK L  
Sbjct:   533 LAALCNFLMPGKFTIDQEID--FETID-SEQEQYIKDLQKKISPFILRRLKKDVEKSLPS 589

Query:   408 KKELKVYVGLSKMQREWYTKV 428
             K E  + V LS +Q E+Y  +
Sbjct:   590 KSERILRVELSDIQTEYYKNI 610

 Score = 167 (63.8 bits), Expect = 8.6e-09, P = 8.6e-09
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             P +IK GE+RD+Q+ GLNWM  L+    NGILADEMGLGKT+QT++ L
Sbjct:   354 PVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFL 401


>RGD|1310969 [details] [associations]
            symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
            "Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
            segregation" evidence=ISO] [GO:0000724 "double-strand break repair
            via homologous recombination" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
            evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0010571 "positive
            regulation of DNA replication involved in S phase" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
            regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
            complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
            evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
            [GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0051225 "spindle assembly"
            evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
            [GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
            [GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
            IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
            Uniprot:D4A6Q6
        Length = 1553

 Score = 525 (189.9 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
 Identities = 105/257 (40%), Positives = 158/257 (61%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   515 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 574

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRER 295
             I P STL NW  EF ++ P  + +   G+   R            + V ITSY++ +++ 
Sbjct:   575 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKKKKTLYTQDAPFHVVITSYQLVVQDV 634

Query:   296 GVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFL 355
               F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + ELWALL+F+
Sbjct:   635 KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFI 694

Query:   356 LPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEVEKRLKPK 408
             +P           WF+   E    + S I+     RLH +LKPF+LRR+K +VE  L  K
Sbjct:   695 MPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDK 754

Query:   409 KELKVYVGLSKMQREWY 425
              E+ +Y  L+  Q+  Y
Sbjct:   755 IEILMYCQLTSRQKLLY 771

 Score = 167 (63.8 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   515 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 565

 Score = 53 (23.7 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   386 KLNFLITQTELYAHFMSRK 404


>UNIPROTKB|I3LQZ8 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
            Uniprot:I3LQZ8
        Length = 1709

 Score = 540 (195.1 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
 Identities = 111/267 (41%), Positives = 166/267 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYM 223
             V+ +  P Y+ G   E+RDYQ+ GLNW+   + N  N  ILADEMGLGKT+QTIS L Y+
Sbjct:   456 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYL 515

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMP 278
              H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I      
Sbjct:   516 FHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKR 575

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TG
Sbjct:   576 LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITG 635

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K
Sbjct:   636 TPLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVK 691

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWY 425
              +VEK L  K E  + V +S +Q+++Y
Sbjct:   692 KDVEKSLPAKVEQILRVEMSALQKQYY 718

 Score = 147 (56.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 35/78 (44%), Positives = 47/78 (60%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGPK 78
             V+ +  P Y+ G   E+RDYQ+ GLNW+   + N  N  ILADEMGLGKT+QTIS L   
Sbjct:   456 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLS-- 513

Query:    79 IDRFDYLLKQTEIFSHFM 96
                  YL  Q +++  F+
Sbjct:   514 -----YLFHQHQLYGPFL 526

 Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1030 KDWDEIIPEEQRKKVEEEERQKEL 1053

 Score = 39 (18.8 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:   143 RHRMTEQEEDEELLANANT 161
             R++   QEED  L +NA++
Sbjct:     2 RNKDKSQEEDSSLHSNASS 20


>SGD|S000003118 [details] [associations]
            symbol:INO80 "ATPase and nucleosome spacing factor"
            species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0043486 "histone exchange"
            evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043618 "regulation of transcription from RNA polymerase II
            promoter in response to stress" evidence=IMP] [GO:0016584
            "nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
            GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
            GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
            GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
            GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
            EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
            SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
            STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
            GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
            NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
            Uniprot:P53115
        Length = 1489

 Score = 523 (189.2 bits), Expect = 3.2e-51, Sum P(2) = 3.2e-51
 Identities = 116/311 (37%), Positives = 181/311 (58%)

Query:   131 TKEK-KNVDPSDHRHRMTEQEEDEEL-LANANTEGKTIVSFENSPFYIKGGEMRDYQVRG 188
             T+ K K  D  DH +   E+EE++EL   N  + G+  ++ E     I    +++YQ++G
Sbjct:   660 TRAKAKQFD--DHANAHEEEEEEDELNFQNPTSLGE--ITIEQPK--ILACTLKEYQLKG 713

Query:   189 LNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNE 248
             LNW+ +LY+ GINGILADEMGLGKT+Q+IS+L ++    NI GP +V+ P STL NW+NE
Sbjct:   714 LNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNE 773

Query:   249 FKKWCPTLRAICLIGDQDARNAMIR--D-----VMMPGEWDVCITSYEMCIRERGVFKKF 301
               K+ P  + +   G+ + R  + +  D           + V +TSY+M + +    +K 
Sbjct:   774 ISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKM 833

Query:   302 NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXX 361
              W+Y+++DEA  IK+ +S   + +  F   NRLLLTGTP+QN++ ELWALL+F++P    
Sbjct:   834 KWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFD 893

Query:   362 XXXXXXXWFNTE-EFMGDHSI------IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVY 414
                    WF+ + E   + +       + RLH +LKPF+LRR+K  V+  L  K E+ V 
Sbjct:   894 SHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVL 953

Query:   415 VGLSKMQREWY 425
               L++ Q + Y
Sbjct:   954 CDLTQRQAKLY 964

 Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 36/73 (49%), Positives = 52/73 (71%)

Query:     3 EQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADE 62
             E+EEDE    N  + G+  ++ E     I    +++YQ++GLNW+ +LY+ GINGILADE
Sbjct:   677 EEEEDELNFQNPTSLGE--ITIEQPK--ILACTLKEYQLKGLNWLANLYDQGINGILADE 732

Query:    63 MGLGKTLQTISLL 75
             MGLGKT+Q+IS+L
Sbjct:   733 MGLGKTVQSISVL 745

 Score = 52 (23.4 bits), Expect = 3.2e-51, Sum P(2) = 3.2e-51
 Identities = 8/16 (50%), Positives = 14/16 (87%)

Query:    81 RFDYLLKQTEIFSHFM 96
             + ++LL QTE++SHF+
Sbjct:   580 KLNFLLTQTELYSHFI 595


>UNIPROTKB|J9NSS6 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
            Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
        Length = 1379

 Score = 534 (193.0 bits), Expect = 3.7e-51, Sum P(2) = 3.7e-51
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   468 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 527

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   528 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT 647

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   648 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 703

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   704 DVEKSLPAKVEQILRVEMSALQKQYY 729

 Score = 143 (55.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   468 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 524

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   525 ----YLFHQHQLYGPFL 537

 Score = 40 (19.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1041 KDWDEIIPEEQRKKVEEEERQKEL 1064

 Score = 39 (18.8 bits), Expect = 3.7e-51, Sum P(2) = 3.7e-51
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:   143 RHRMTEQEEDEELLANANT 161
             R++   QEED  L +NA++
Sbjct:     3 RNKDKSQEEDSSLHSNASS 21


>UNIPROTKB|H0YMN5 [details] [associations]
            symbol:INO80 "DNA helicase INO80" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] InterPro:IPR000330
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
            GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
            HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
            Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
        Length = 1104

 Score = 516 (186.7 bits), Expect = 3.7e-51, Sum P(2) = 3.7e-51
 Identities = 106/263 (40%), Positives = 160/263 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   513 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 572

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD------VMMPGEWDVCITSYE 289
             I P STL NW  EF ++ P  + +   G+   R  + R             + V ITSY+
Sbjct:   573 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 632

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 349
             + +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + ELW
Sbjct:   633 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELW 692

Query:   350 ALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEVE 402
             ALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +VE
Sbjct:   693 ALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVE 752

Query:   403 KRLKPKKELKVYVGLSKMQREWY 425
               L  K E+ +Y  L+  Q+  Y
Sbjct:   753 NELSDKIEILMYCQLTSRQKLLY 775

 Score = 167 (63.8 bits), Expect = 6.4e-09, P = 6.4e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   513 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 563

 Score = 53 (23.7 bits), Expect = 3.7e-51, Sum P(2) = 3.7e-51
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   384 KLNFLITQTELYAHFMSRK 402


>UNIPROTKB|O14647 [details] [associations]
            symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
            EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
            EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
            RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
            ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
            PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
            Ensembl:ENST00000394196 Ensembl:ENST00000420239
            Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
            UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
            MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
            OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
            NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
            Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
        Length = 1828

 Score = 536 (193.7 bits), Expect = 6.3e-51, Sum P(2) = 6.3e-51
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   468 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLF 527

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   528 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   648 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 703

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   704 DVEKSLPAKVEQILRVEMSALQKQYY 729

 Score = 143 (55.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   468 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLS--- 524

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   525 ----YLFHQHQLYGPFL 537

 Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1041 KDWDEIIPEEQRKKVEEEERQKEL 1064

 Score = 39 (18.8 bits), Expect = 6.3e-51, Sum P(2) = 6.3e-51
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:   143 RHRMTEQEEDEELLANANT 161
             R++   QEED  L +NA++
Sbjct:     3 RNKDKSQEEDSSLHSNASS 21

 Score = 37 (18.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query:   144 HRMTEQEEDEELLANANTEGK 164
             H+   QEE+E+   +  T GK
Sbjct:  1556 HKKRSQEEEEQKKKDDVTGGK 1576


>UNIPROTKB|F1SA77 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
            Uniprot:F1SA77
        Length = 1831

 Score = 536 (193.7 bits), Expect = 6.3e-51, Sum P(2) = 6.3e-51
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   470 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 529

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   530 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 589

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   590 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 649

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   650 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 705

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   706 DVEKSLPAKVEQILRVEMSALQKQYY 731

 Score = 143 (55.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   470 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 526

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   527 ----YLFHQHQLYGPFL 539

 Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1043 KDWDEIIPEEQRKKVEEEERQKEL 1066

 Score = 39 (18.8 bits), Expect = 6.3e-51, Sum P(2) = 6.3e-51
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:   143 RHRMTEQEEDEELLANANT 161
             R++   QEED  L +NA++
Sbjct:     2 RNKDKSQEEDSSLHSNASS 20


>UNIPROTKB|D4AD08 [details] [associations]
            symbol:Chd2 "Chromodomain helicase DNA binding protein 2
            (Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
            IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
            Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
            RGD:1310056 NextBio:659434 Uniprot:D4AD08
        Length = 1834

 Score = 535 (193.4 bits), Expect = 8.1e-51, Sum P(2) = 8.1e-51
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   475 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 534

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   535 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEWIHSQTKRL 594

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   595 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 654

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   655 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 710

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   711 DVEKSLPAKVEQILRVEMSALQKQYY 736

 Score = 143 (55.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   475 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 531

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   532 ----YLFHQHQLYGPFL 544

 Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1048 KDWDEIIPEEQRKKVEEEERQKEL 1071

 Score = 39 (18.8 bits), Expect = 8.1e-51, Sum P(2) = 8.1e-51
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:   143 RHRMTEQEEDEELLANANT 161
             R++   QEED  L +NA++
Sbjct:     3 RNKDKSQEEDSSLHSNASS 21


>UNIPROTKB|Q9ULG1 [details] [associations]
            symbol:INO80 "DNA helicase INO80" species:9606 "Homo
            sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
            [GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
            response to UV" evidence=IMP] [GO:0000724 "double-strand break
            repair via homologous recombination" evidence=IMP] [GO:0070914
            "UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
            response to ionizing radiation" evidence=IMP] [GO:0006302
            "double-strand break repair" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0030307 "positive regulation of cell growth"
            evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
            cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
            replication involved in S phase" evidence=IMP] [GO:0043014
            "alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
            assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
            GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
            GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
            GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
            GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
            EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
            RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
            SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
            PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
            Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
            KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
            HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
            HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
            OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
            ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
            Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
        Length = 1556

 Score = 516 (186.7 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
 Identities = 106/263 (40%), Positives = 160/263 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   513 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 572

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD------VMMPGEWDVCITSYE 289
             I P STL NW  EF ++ P  + +   G+   R  + R             + V ITSY+
Sbjct:   573 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 632

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 349
             + +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + ELW
Sbjct:   633 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELW 692

Query:   350 ALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEVE 402
             ALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +VE
Sbjct:   693 ALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVE 752

Query:   403 KRLKPKKELKVYVGLSKMQREWY 425
               L  K E+ +Y  L+  Q+  Y
Sbjct:   753 NELSDKIEILMYCQLTSRQKLLY 775

 Score = 167 (63.8 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   513 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 563

 Score = 53 (23.7 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   384 KLNFLITQTELYAHFMSRK 402


>UNIPROTKB|F1PKX5 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000045 "regulation of G1/S transition of
            mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
            ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
            repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
            Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
            Uniprot:F1PKX5
        Length = 1560

 Score = 516 (186.7 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
 Identities = 106/263 (40%), Positives = 160/263 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   516 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 575

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD------VMMPGEWDVCITSYE 289
             I P STL NW  EF ++ P  + +   G+   R  + R             + V ITSY+
Sbjct:   576 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 635

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 349
             + +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + ELW
Sbjct:   636 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELW 695

Query:   350 ALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEVE 402
             ALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +VE
Sbjct:   696 ALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVE 755

Query:   403 KRLKPKKELKVYVGLSKMQREWY 425
               L  K E+ +Y  L+  Q+  Y
Sbjct:   756 NELSDKIEILMYCQLTSRQKLLY 778

 Score = 167 (63.8 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   516 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 566

 Score = 53 (23.7 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   387 KLNFLITQTELYAHFMSRK 405

 Score = 37 (18.1 bits), Expect = 8.0e-49, Sum P(2) = 8.0e-49
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query:   140 SDHRHRMTEQEEDEEL-LANANTEGKT-IVSFE--NSPFYIKGGEMRDYQVRGLNWMISL 195
             +D +    E+EE+EEL L+         +  ++  +   Y K  E++ YQ      ++S 
Sbjct:   138 ADSQSEDNEEEEEEELHLSREELHNMLRLHKYKKLHQNKYSKDKELQQYQYYSAG-LLST 196

Query:   196 YE 197
             Y+
Sbjct:   197 YD 198


>UNIPROTKB|E1BAN8 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
            cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
            radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
            RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
            GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
        Length = 1566

 Score = 516 (186.7 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
 Identities = 106/263 (40%), Positives = 160/263 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   522 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 581

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD------VMMPGEWDVCITSYE 289
             I P STL NW  EF ++ P  + +   G+   R  + R             + V ITSY+
Sbjct:   582 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 641

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 349
             + +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + ELW
Sbjct:   642 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELW 701

Query:   350 ALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEVE 402
             ALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +VE
Sbjct:   702 ALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVE 761

Query:   403 KRLKPKKELKVYVGLSKMQREWY 425
               L  K E+ +Y  L+  Q+  Y
Sbjct:   762 NELSDKIEILMYCQLTSRQKLLY 784

 Score = 167 (63.8 bits), Expect = 9.8e-09, P = 9.8e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   522 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 572

 Score = 53 (23.7 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   393 KLNFLITQTELYAHFMSRK 411


>UNIPROTKB|F1SSV0 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
            cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
            radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
            Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
            Uniprot:F1SSV0
        Length = 1566

 Score = 516 (186.7 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
 Identities = 106/263 (40%), Positives = 160/263 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   522 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 581

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD------VMMPGEWDVCITSYE 289
             I P STL NW  EF ++ P  + +   G+   R  + R             + V ITSY+
Sbjct:   582 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 641

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 349
             + +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + ELW
Sbjct:   642 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELW 701

Query:   350 ALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEVE 402
             ALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +VE
Sbjct:   702 ALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVE 761

Query:   403 KRLKPKKELKVYVGLSKMQREWY 425
               L  K E+ +Y  L+  Q+  Y
Sbjct:   762 NELSDKIEILMYCQLTSRQKLLY 784

 Score = 167 (63.8 bits), Expect = 9.8e-09, P = 9.8e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   522 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 572

 Score = 53 (23.7 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   393 KLNFLITQTELYAHFMSRK 411


>POMBASE|SPAC3G6.01 [details] [associations]
            symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
            species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
            chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
            "DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IMP]
            [GO:0031934 "mating-type region heterochromatin" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
            nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
            at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
            GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
            GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
            OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
            ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
            EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
            OMA:HINGSST NextBio:20804092 Uniprot:O14139
        Length = 1388

 Score = 537 (194.1 bits), Expect = 1.8e-50, P = 1.8e-50
 Identities = 111/265 (41%), Positives = 158/265 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E  P YI GGE+RD+Q+ G+NWM  L+    NGILADEMGLGKT+QT++ L Y+ H    
Sbjct:   364 EQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQ 423

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDV--MMPG----EWDV 283
              GP +V+VP ST+  W      W   +  I  +G+  +R  +IRD    + G    ++++
Sbjct:   424 HGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQ-VIRDYEFYVDGTQKIKFNL 482

Query:   284 CITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQN 343
              +T+YE  +++R V     W+Y+ IDEAHR+KN +S L E + +FK +NRLL+TGTPLQN
Sbjct:   483 LLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQN 542

Query:   344 NLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEK 403
             N+ EL AL++FL+P               EE     + I  L   L+P++LRRLK +VEK
Sbjct:   543 NIRELAALVDFLMPGKFEIREEINLEAPDEE---QEAYIRSLQEHLQPYILRRLKKDVEK 599

Query:   404 RLKPKKELKVYVGLSKMQREWYTKV 428
              L  K E  + V LS +Q  WY  +
Sbjct:   600 SLPSKSERILRVELSDLQMYWYKNI 624

 Score = 172 (65.6 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E  P YI GGE+RD+Q+ G+NWM  L+    NGILADEMGLGKT+QT++ L
Sbjct:   364 EQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFL 414


>UNIPROTKB|H9L0N0 [details] [associations]
            symbol:H9L0N0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
            EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
            EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
            EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
            Uniprot:H9L0N0
        Length = 1444

 Score = 537 (194.1 bits), Expect = 2.0e-50, P = 2.0e-50
 Identities = 112/268 (41%), Positives = 168/268 (62%)

Query:   167 VSFENSPFYIKGG---EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  PFYI G    E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   139 VALKKQPFYIGGRDCLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 198

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W P + A+  +GD  +RN MIR  + M P   
Sbjct:   199 FHEHELYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRN-MIRTHEWMHPQTK 257

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ IDEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   258 RLKFNILLTTYEILLKDKSFLGGLNWVFIGIDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 317

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   318 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREFGYASLHKELEPFLLRRV 373

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   374 KKDVEKSLPAKVEQILRMEMSALQKQYY 401

 Score = 158 (60.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
 Identities = 36/78 (46%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKGG---EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  PFYI G    E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   139 VALKKQPFYIGGRDCLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 195

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + E++  F+
Sbjct:   196 ----NYLFHEHELYGPFL 209

 Score = 41 (19.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
 Identities = 6/20 (30%), Positives = 13/20 (65%)

Query:   143 RHRMTEQEEDEELLANANTE 162
             + + ++Q  D+ + AN NT+
Sbjct:  1236 KRQESQQHSDQNIAANVNTQ 1255


>MGI|MGI:1915392 [details] [associations]
            symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
            "Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
            evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
            "DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
            "response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
            cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
            [GO:0010571 "positive regulation of DNA replication involved in S
            phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
            unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
            evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
            assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
            [GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
            "cellular response to ionizing radiation" evidence=ISO] [GO:2000045
            "regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
            GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
            GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
            GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
            CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
            HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
            EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
            RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
            SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
            PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
            Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
            InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
            GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
        Length = 1559

 Score = 515 (186.3 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
 Identities = 106/263 (40%), Positives = 159/263 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   515 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 574

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD------VMMPGEWDVCITSYE 289
             I P STL NW  EF ++ P  + +   G+   R  + R             + V ITSY+
Sbjct:   575 ISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQ 634

Query:   290 MCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 349
             + +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + ELW
Sbjct:   635 LVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELW 694

Query:   350 ALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEVE 402
             ALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +VE
Sbjct:   695 ALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVE 754

Query:   403 KRLKPKKELKVYVGLSKMQREWY 425
               L  K E+  Y  L+  Q+  Y
Sbjct:   755 NELSDKIEILTYCQLTSRQKLLY 777

 Score = 167 (63.8 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   515 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 565

 Score = 53 (23.7 bits), Expect = 2.1e-50, Sum P(2) = 2.1e-50
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   386 KLNFLITQTELYAHFMSRK 404


>ZFIN|ZDB-GENE-041014-72 [details] [associations]
            symbol:ino80 "INO80 homolog (S. cerevisiae)"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
            HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
            UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
            InParanoid:Q5RGG8 Uniprot:Q5RGG8
        Length = 1582

 Score = 515 (186.3 bits), Expect = 3.6e-50, Sum P(2) = 3.6e-50
 Identities = 108/264 (40%), Positives = 160/264 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   514 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 573

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP-------GEWDVCITSY 288
             I P STL NW  EF ++ P  + +   G+   R  +IR              + V ITSY
Sbjct:   574 ISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRK-VIRKFWSQKTLYTQNAPFHVVITSY 632

Query:   289 EMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHEL 348
             ++ +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + EL
Sbjct:   633 QLVVQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAEL 692

Query:   349 WALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEV 401
             WALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +V
Sbjct:   693 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDV 752

Query:   402 EKRLKPKKELKVYVGLSKMQREWY 425
             E  L  K E+  Y  L+  QR  Y
Sbjct:   753 ENELSDKIEILTYCQLTSRQRLLY 776

 Score = 167 (63.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   514 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 564

 Score = 51 (23.0 bits), Expect = 3.6e-50, Sum P(2) = 3.6e-50
 Identities = 7/16 (43%), Positives = 14/16 (87%)

Query:    81 RFDYLLKQTEIFSHFM 96
             + ++L+ QTE+++HFM
Sbjct:   385 KLNFLITQTELYAHFM 400

 Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
 Identities = 22/93 (23%), Positives = 38/93 (40%)

Query:   314 IKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN-T 372
             ++NE S   EI+   + T+R  L    L+N +  +  LL   +              N  
Sbjct:   752 VENELSDKIEILTYCQLTSRQRLLYQALKNKI-SIEDLLQSSMGSAQQAHSTTSSLMNLV 810

Query:   373 EEF--MGDH-SIIER------LHSVLKPFLLRR 396
              +F  + +H  + ER       H  LKPF++ +
Sbjct:   811 MQFRKVCNHPDLFERQEIRSPFHMSLKPFIMSK 843


>UNIPROTKB|G3MXX3 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
            Uniprot:G3MXX3
        Length = 1810

 Score = 536 (193.7 bits), Expect = 3.8e-50, P = 3.8e-50
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   450 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 509

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   510 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 569

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   570 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 629

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   630 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 685

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   686 DVEKSLPAKVEQILRVEMSALQKQYY 711

 Score = 143 (55.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   450 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 506

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   507 ----YLFHQHQLYGPFL 519

 Score = 40 (19.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1023 KDWDEIIPEEQRKKVEEEERQKEL 1046


>UNIPROTKB|J9NX79 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
            Uniprot:J9NX79
        Length = 1689

 Score = 534 (193.0 bits), Expect = 5.5e-50, P = 5.5e-50
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   437 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 496

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   497 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 556

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   557 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT 616

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   617 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 672

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   673 DVEKSLPAKVEQILRVEMSALQKQYY 698

 Score = 143 (55.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   437 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 493

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   494 ----YLFHQHQLYGPFL 506

 Score = 40 (19.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1010 KDWDEIIPEEQRKKVEEEERQKEL 1033


>UNIPROTKB|E1C1A9 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
            EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
            Uniprot:E1C1A9
        Length = 1727

 Score = 534 (193.0 bits), Expect = 5.7e-50, P = 5.7e-50
 Identities = 111/267 (41%), Positives = 168/267 (62%)

Query:   167 VSFENSPFYI--KGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P YI  +  E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   470 VALKKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLF 529

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD---VMMPGE- 280
             H   + GP +V+VP STL +W  EF+ W P +  +  IGD  +RN MIR+   +    + 
Sbjct:   530 HQHQLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRN-MIREYEWIHSQSKR 588

Query:   281 --WDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               ++  IT+YE+ ++++ V    +W +L +DEAHR+KN+ S L + + +FK+ +RLL+TG
Sbjct:   589 LKFNALITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITG 648

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K
Sbjct:   649 TPLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVK 704

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWY 425
              +VEK L  K E  + V +S +Q+++Y
Sbjct:   705 KDVEKSLPAKVEQILRVEMSALQKQYY 731

 Score = 140 (54.3 bits), Expect = 0.00016, Sum P(3) = 0.00016
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYI--KGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P YI  +  E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   470 VALKKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLS--- 526

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   527 ----YLFHQHQLYGPFL 539

 Score = 41 (19.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+  ++ P + R ++ E+E  +EL
Sbjct:  1045 KDWDDIIPEEQRKKVEEEERQKEL 1068

 Score = 38 (18.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
 Identities = 10/34 (29%), Positives = 22/34 (64%)

Query:   392 FLLRRLKSEVEKR--LKPKKELKVYVGLSKMQRE 423
             +LL+ LK ++EK+  +K  +E K+     ++++E
Sbjct:  1320 YLLKLLKKDLEKKENMKDGEEGKLKKRKPRVKKE 1353


>UNIPROTKB|E2R5Z7 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
            NextBio:20854276 Uniprot:E2R5Z7
        Length = 1831

 Score = 534 (193.0 bits), Expect = 6.3e-50, P = 6.3e-50
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   471 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 530

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   531 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 590

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   591 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT 650

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   651 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 706

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   707 DVEKSLPAKVEQILRVEMSALQKQYY 732

 Score = 143 (55.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   471 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 527

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   528 ----YLFHQHQLYGPFL 540

 Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1044 KDWDEIIPEEQRKKVEEEERQKEL 1067


>UNIPROTKB|J9PA90 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
            Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
        Length = 1840

 Score = 534 (193.0 bits), Expect = 6.4e-50, P = 6.4e-50
 Identities = 109/266 (40%), Positives = 165/266 (62%)

Query:   167 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   481 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 540

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM-----IRDVMMPG 279
             H   + GP +++VP STL +W  EF+ W P +  +  IGD  +RN +     I       
Sbjct:   541 HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 600

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++  IT+YE+ ++++ V    NW +L +DEAHR+KN+ S L + + +FK+ +RLL+TGT
Sbjct:   601 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT 660

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQN+L ELW+LL+F++P            F  +   G  +  + LH VL+PFLLRR+K 
Sbjct:   661 PLQNSLKELWSLLHFIMPEKFEFWED----FEEDHGKGRENGYQSLHKVLEPFLLRRVKK 716

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWY 425
             +VEK L  K E  + V +S +Q+++Y
Sbjct:   717 DVEKSLPAKVEQILRVEMSALQKQYY 742

 Score = 143 (55.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 VSFENSPFYIKGG--EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKI 79
             V+ +  P Y+ G   E+RDYQ+ GLNW+   +    + ILADEMGLGKT+QTIS L    
Sbjct:   481 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS--- 537

Query:    80 DRFDYLLKQTEIFSHFM 96
                 YL  Q +++  F+
Sbjct:   538 ----YLFHQHQLYGPFL 550

 Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K+   + P + R ++ E+E  +EL
Sbjct:  1054 KDWDEIIPEEQRKKVEEEERQKEL 1077


>RGD|1306794 [details] [associations]
            symbol:Chd1 "chromodomain helicase DNA binding protein 1"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
            [GO:0035064 "methylated histone residue binding" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
            IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
            Uniprot:D4AAG9
        Length = 904

 Score = 525 (189.9 bits), Expect = 9.9e-50, P = 9.9e-50
 Identities = 110/268 (41%), Positives = 168/268 (62%)

Query:   167 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   462 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 521

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   522 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 580

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   581 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 640

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   641 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 696

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   697 KKDVEKSLPAKVEQILRMEMSALQKQYY 724

 Score = 148 (57.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   462 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 518

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   519 ----NYLFHEHQLYGPFL 532


>WB|WBGene00010369 [details] [associations]
            symbol:chd-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
            RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
            STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
            KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
            InParanoid:O17909 NextBio:875487 Uniprot:O17909
        Length = 1461

 Score = 530 (191.6 bits), Expect = 1.1e-49, P = 1.1e-49
 Identities = 117/308 (37%), Positives = 185/308 (60%)

Query:   132 KEKKNVDPSD---HRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIK-GGE----MRD 183
             +++K V P     + HR+ E  +     +N   +      FE+ P ++K  GE    +RD
Sbjct:   349 EDEKMVAPEQIKAYYHRI-ENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRD 407

Query:   184 YQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLL 243
             YQ+ GLNWM+  +  G + ILADEMGLGKT+Q+ISLL  + H  ++AGP++V+VP ST+ 
Sbjct:   408 YQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMA 467

Query:   244 NWMNEFKKWCPTLRAICLIGDQDARNAMIRDV--MMPG----EWDVCITSYEMCIRERGV 297
              W  EF +W P +  +  +GD  +R+ MIR     + G    + +  +T+YE+ ++++  
Sbjct:   468 AWQKEFAQWAPEMNLVVYMGDVVSRD-MIRQYEWFVGGTKKMKINAILTTYEILLKDKAF 526

Query:   298 FKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
                 +W  L++DEAHR+KN++S L + + +F+  ++LL+TGTPLQN+L ELWALL+F++P
Sbjct:   527 LSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMP 586

Query:   358 XXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGL 417
                         F T     +H  I  LH  L+PFLLRR+K +VEK L PK E  + V +
Sbjct:   587 EKFDCWEE----FETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDM 642

Query:   418 SKMQREWY 425
             +  Q+++Y
Sbjct:   643 TAHQKQFY 650

 Score = 159 (61.0 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
 Identities = 34/65 (52%), Positives = 45/65 (69%)

Query:    24 FENSPFYIK-GGE----MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             FE+ P ++K  GE    +RDYQ+ GLNWM+  +  G + ILADEMGLGKT+Q+ISLL   
Sbjct:   388 FESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASL 447

Query:    79 IDRFD 83
               R+D
Sbjct:   448 FHRYD 452

 Score = 52 (23.4 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
 Identities = 17/36 (47%), Positives = 19/36 (52%)

Query:   382 IERLHSVLKPFLLRRLKSEVEKR-LKPKKELKVYVG 416
             IER H+ LKP L   LKSE  K   KP    K+  G
Sbjct:  1117 IERSHAELKP-LHEILKSEETKTSFKPPANAKLQKG 1151

 Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEE 154
             +KE+K  +  DH+ R  ++E+D E
Sbjct:  1397 SKEEKPKEAKDHKER--DREKDRE 1418

 Score = 41 (19.5 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             T E   + P + R+R+ E+E  +EL
Sbjct:   957 TDEWAAIIPEEDRNRILEEERMKEL 981


>UNIPROTKB|F1NYY9 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0010571 "positive
            regulation of DNA replication involved in S phase" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
            regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
            complex" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
            assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
            evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
            cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0000724 "double-strand break repair
            via homologous recombination" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
            GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
            GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
            GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
            GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
            Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
        Length = 1564

 Score = 508 (183.9 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
 Identities = 106/264 (40%), Positives = 160/264 (60%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIV 235
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL ++    NI GP ++
Sbjct:   518 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLI 577

Query:   236 IVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVM-------MPGEWDVCITSY 288
             I P STL NW  EF ++ P  + +   G+   R  +IR              + V ITSY
Sbjct:   578 ISPASTLNNWHQEFARFVPKFKVLPYWGNPHDRK-VIRKFWSQKTLYTQDAPFHVVITSY 636

Query:   289 EMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHEL 348
             ++ +++   F++  W+Y+V+DEA  +K+  S   +I+ +F+  NRLLLTGTP+QN + EL
Sbjct:   637 QLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAEL 696

Query:   349 WALLNFLLPXXXXXXXXXXXWFNT--EEFMGDHSIIE-----RLHSVLKPFLLRRLKSEV 401
             WALL+F++P           WF+   E    + S I+     RLH +LKPF+LRR+K +V
Sbjct:   697 WALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDV 756

Query:   402 EKRLKPKKELKVYVGLSKMQREWY 425
             E  L  K E+ +Y   +  Q+  Y
Sbjct:   757 ENELSDKIEILMYCQQTSRQKLLY 780

 Score = 167 (63.8 bits), Expect = 9.8e-09, P = 9.8e-09
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDR 81
             I  G+++ YQ++G+NW+ +LYE GINGILADEMGLGKT+Q+I+LL    +R
Sbjct:   518 IFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAER 568

 Score = 53 (23.7 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   389 KLNFLITQTELYAHFMSRK 407


>UNIPROTKB|B6ZLK2 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
            UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
        Length = 1719

 Score = 530 (191.6 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 110/268 (41%), Positives = 167/268 (62%)

Query:   167 VSFENSPFYIKGGE---MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G E   +RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   460 VALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 519

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W P + A+  +GD  +RN MIR  + M P   
Sbjct:   520 FHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRN-MIRTHEWMHPQTK 578

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   579 RLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 638

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   639 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 694

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   695 KKDVEKSLPAKVEQILRMEMSALQKQYY 722

 Score = 147 (56.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 34/78 (43%), Positives = 48/78 (61%)

Query:    22 VSFENSPFYIKGGE---MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G E   +RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   460 VALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 516

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   517 ----NYLFHEHQLYGPFL 530

 Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query:   135 KNVDPSDHRHRMTEQEEDEEL 155
             + + P   R R+ E+E  +EL
Sbjct:  1040 EEIIPESQRRRIEEEERQKEL 1060


>ZFIN|ZDB-GENE-050419-256 [details] [associations]
            symbol:chd2 "chromodomain helicase DNA binding
            protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
            Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
            Uniprot:E7F7R2
        Length = 1813

 Score = 524 (189.5 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
 Identities = 112/269 (41%), Positives = 165/269 (61%)

Query:   167 VSFENSPFYI--KGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V  +  P YI  +  E+RDYQ+ G+NW+   +    + ILADEMGLGKT+QTIS L Y+ 
Sbjct:   473 VPLKKQPSYIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLF 532

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDV--MMPG--- 279
             H   + GP IV+VP STL +W  EF  W P +  +  +GD  +R   IRD   + P    
Sbjct:   533 HQHQLYGPFIVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVTSRKT-IRDYEWINPQTKR 591

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              +++  +T+YE+ ++++GV    NW +L +DEAHR+KN+ S L + + +F++ +RLL+TG
Sbjct:   592 IKFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITG 651

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXW--FNTEEFMGDHSIIERLHSVLKPFLLRR 396
             TPLQN+L ELW+LL+FL+            W  F  E   G  +  + LH VL+PFLLRR
Sbjct:   652 TPLQNSLKELWSLLHFLM------SDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRR 705

Query:   397 LKSEVEKRLKPKKELKVYVGLSKMQREWY 425
             +K +VEK L  K E  + V +S  Q+++Y
Sbjct:   706 VKKDVEKSLPAKVEQILRVDMSAQQKQFY 734

 Score = 37 (18.1 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query:   402 EKRLKPKKELKVYVGLSK 419
             +KR KPKKE     G  K
Sbjct:  1415 KKRSKPKKEKAKPAGKGK 1432


>CGD|CAL0000831 [details] [associations]
            symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
            "Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
            "histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
            at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043618 "regulation of transcription from RNA polymerase II
            promoter in response to stress" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
            RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
            GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
            Uniprot:Q59KI4
        Length = 1387

 Score = 506 (183.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
 Identities = 113/312 (36%), Positives = 176/312 (56%)

Query:   143 RHRMTEQEEDEELLANANTEGKTIVSFEN----------SPFYIKGGEMRDYQVRGLNWM 192
             +++  + +  EE   N +T G+ + +F+N           P  +K   +++YQ++GLNW+
Sbjct:   626 QNKAKQFDNSEESFKNPDTNGEEM-NFQNPTLLGDITIPQPNMLKC-TLKEYQLKGLNWL 683

Query:   193 ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKW 252
              +LYE GINGILADEMGLGKT+Q+IS+L Y+    N+ GP +V+ P STL NW  E  K+
Sbjct:   684 ANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNMWGPFLVVTPASTLHNWQQEITKF 743

Query:   253 CPTLRAICLIGDQDARNAM--------IR-DVMMPGEWDVCITSYEMCIRERGVFKKFNW 303
              P  + +   G+   R  +        +R D   P  + V +TSY++ + +   F+K  W
Sbjct:   744 VPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSP--FHVLVTSYQLIVADIAYFQKMKW 801

Query:   304 RYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXX 363
             +Y+++DEA  IK+  S   + +      NRLLLTGTP+QN++ ELWALL+F++P      
Sbjct:   802 QYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWALLHFIMPSIFDSH 861

Query:   364 XXXXXWF--NTEEFMG-----DHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVG 416
                  WF  + E         D   + RLH +LKPF+LRR+K  V+  L  K E+ VY  
Sbjct:   862 DEFSDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRIKKNVQSELGDKVEIDVYCD 921

Query:   417 LSKMQREWYTKV 428
             L+  Q++ Y ++
Sbjct:   922 LTTRQKKLYQQL 933

 Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 37/81 (45%), Positives = 54/81 (66%)

Query:     5 EEDEELLANANTEGKTIVSFEN----------SPFYIKGGEMRDYQVRGLNWMISLYENG 54
             +  EE   N +T G+ + +F+N           P  +K   +++YQ++GLNW+ +LYE G
Sbjct:   633 DNSEESFKNPDTNGEEM-NFQNPTLLGDITIPQPNMLKC-TLKEYQLKGLNWLANLYEQG 690

Query:    55 INGILADEMGLGKTLQTISLL 75
             INGILADEMGLGKT+Q+IS+L
Sbjct:   691 INGILADEMGLGKTVQSISVL 711

 Score = 50 (22.7 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
 Identities = 7/16 (43%), Positives = 14/16 (87%)

Query:    81 RFDYLLKQTEIFSHFM 96
             + ++L+ QTE++SHF+
Sbjct:   542 KLNFLITQTELYSHFI 557

 Score = 37 (18.1 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
 Identities = 10/35 (28%), Positives = 13/35 (37%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEELLANANTE-GK 164
             T      D  D RH+    +    +L    TE GK
Sbjct:   288 TASANGSDTPDRRHQRQSSKPSTPILIKPKTEPGK 322


>MGI|MGI:88393 [details] [associations]
            symbol:Chd1 "chromodomain helicase DNA binding protein 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=NAS] [GO:0004386 "helicase activity"
            evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
            [GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 CTD:1105
            GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
            OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
            EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
            UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
            STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
            Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
            InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
            Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
        Length = 1711

 Score = 525 (189.9 bits), Expect = 5.1e-49, P = 5.1e-49
 Identities = 110/268 (41%), Positives = 168/268 (62%)

Query:   167 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   462 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 521

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   522 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 580

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   581 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 640

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   641 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 696

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   697 KKDVEKSLPAKVEQILRMEMSALQKQYY 724

 Score = 148 (57.2 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   462 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 518

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   519 ----NYLFHEHQLYGPFL 532

 Score = 46 (21.3 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P + R R+ E+E  +EL
Sbjct:  1038 SKNWEEIIPEEQRRRLEEEERQKEL 1062

 Score = 37 (18.1 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query:   395 RRLKSEVEKRLKPKKELK 412
             R  KS+  K +K K+E+K
Sbjct:  1335 RAKKSKAMKSIKVKEEIK 1352


>UNIPROTKB|F1RN66 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
            Uniprot:F1RN66
        Length = 1794

 Score = 525 (189.9 bits), Expect = 5.6e-49, P = 5.6e-49
 Identities = 110/268 (41%), Positives = 168/268 (62%)

Query:   167 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   458 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 517

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   518 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 576

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   577 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 636

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   637 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 692

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   693 KKDVEKSLPAKVEQILRMEMSALQKQYY 720

 Score = 148 (57.2 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   458 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 514

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   515 ----NYLFHEHQLYGPFL 528

 Score = 50 (22.7 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P D R R+ E+E  +EL
Sbjct:  1034 SKNWEEIIPEDQRRRLEEEERQKEL 1058


>UNIPROTKB|I3L6N4 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
            Uniprot:I3L6N4
        Length = 1798

 Score = 525 (189.9 bits), Expect = 5.6e-49, P = 5.6e-49
 Identities = 110/268 (41%), Positives = 168/268 (62%)

Query:   167 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   458 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 517

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   518 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 576

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   577 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 636

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   637 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 692

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   693 KKDVEKSLPAKVEQILRMEMSALQKQYY 720

 Score = 148 (57.2 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   458 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 514

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   515 ----NYLFHEHQLYGPFL 528

 Score = 50 (22.7 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P D R R+ E+E  +EL
Sbjct:  1034 SKNWEEIIPEDQRRRLEEEERQKEL 1058


>UNIPROTKB|I3LIS2 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
            EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
        Length = 1799

 Score = 525 (189.9 bits), Expect = 5.6e-49, P = 5.6e-49
 Identities = 110/268 (41%), Positives = 168/268 (62%)

Query:   167 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   459 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 518

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   519 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 577

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   578 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 637

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   638 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 693

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   694 KKDVEKSLPAKVEQILRMEMSALQKQYY 721

 Score = 148 (57.2 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   459 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 515

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   516 ----NYLFHEHQLYGPFL 529

 Score = 50 (22.7 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P D R R+ E+E  +EL
Sbjct:  1035 SKNWEEIIPEDQRRRLEEEERQKEL 1059


>UNIPROTKB|F1MGF2 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
            EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
            Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
        Length = 1810

 Score = 525 (189.9 bits), Expect = 5.7e-49, P = 5.7e-49
 Identities = 110/268 (41%), Positives = 168/268 (62%)

Query:   167 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   476 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 535

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   536 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 594

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   595 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 654

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   655 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 710

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   711 KKDVEKSLPAKVEQILRMEMSALQKQYY 738

 Score = 148 (57.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   476 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 532

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   533 ----NYLFHEHQLYGPFL 546

 Score = 50 (22.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P D R R+ E+E  +EL
Sbjct:  1052 SKNWEEIIPEDQRRRLEEEERQKEL 1076


>TAIR|locus:2062999 [details] [associations]
            symbol:BRM "AT2G46020" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
            "helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0010199 "organ boundary specification between
            lateral organs and the meristem" evidence=IGI] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
            "regulation of gene expression, epigenetic" evidence=RCA;IMP]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
            GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
            EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
            EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
            RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
            ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
            PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
            KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
            InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
            ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
            GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
        Length = 2193

 Score = 526 (190.2 bits), Expect = 6.0e-49, P = 6.0e-49
 Identities = 105/269 (39%), Positives = 161/269 (59%)

Query:   173 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGP 232
             P  ++ G +RDYQ+ GL WM+SLY N +NGILADEMGLGKT+Q ++L+ Y+  ++   GP
Sbjct:   973 PSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGP 1032

Query:   233 HIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCI 292
             H++IVP + L+NW +E   W P++  I  +G +D R+ +    +   +++V +T+YE  +
Sbjct:  1033 HLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIM 1092

Query:   293 RERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALL 352
              +R    K +W+Y++IDEA R+K+ +S L+  +  ++   RLLLTGTPLQN+L ELW+LL
Sbjct:  1093 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1152

Query:   353 NFLLPXXXXXXXXXXXWFNTEEFMGD---HSI-------------IERLHSVLKPFLLRR 396
             N LLP           WF  + F  +   H+I             I RLH +L+PF+LRR
Sbjct:  1153 NLLLPDVFDNRKAFHDWF-AQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRR 1211

Query:   397 LKSEVEKRLKPKKELKVYVGLSKMQREWY 425
                +VE  L  K  + +   +S +Q   Y
Sbjct:  1212 RVEDVEGSLPAKVSVVLRCRMSAIQSAVY 1240

 Score = 164 (62.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
 Identities = 29/48 (60%), Positives = 39/48 (81%)

Query:    28 PFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             P  ++ G +RDYQ+ GL WM+SLY N +NGILADEMGLGKT+Q ++L+
Sbjct:   973 PSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALI 1020

 Score = 39 (18.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             + E++N+D  +       Q +D+EL
Sbjct:  1633 SSEERNIDSGNEEEGDIRQFDDDEL 1657


>UNIPROTKB|E2QUI5 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 CTD:1105
            GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
            RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
            KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
        Length = 1711

 Score = 524 (189.5 bits), Expect = 6.6e-49, P = 6.6e-49
 Identities = 109/268 (40%), Positives = 167/268 (62%)

Query:   167 VSFENSPFYIKGGE---MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G E   +RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   463 VALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 522

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   523 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 581

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   582 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 641

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   642 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 697

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   698 KKDVEKSLPAKVEQILRMEMSALQKQYY 725

 Score = 147 (56.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 34/78 (43%), Positives = 48/78 (61%)

Query:    22 VSFENSPFYIKGGE---MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G E   +RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   463 VALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 519

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   520 ----NYLFHEHQLYGPFL 533

 Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P D R R+ E+E  +EL
Sbjct:  1039 SKNWEEIIPEDQRRRLEEEERQKEL 1063


>UNIPROTKB|J9P6Y8 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
            Uniprot:J9P6Y8
        Length = 1782

 Score = 524 (189.5 bits), Expect = 7.0e-49, P = 7.0e-49
 Identities = 109/268 (40%), Positives = 167/268 (62%)

Query:   167 VSFENSPFYIKGGE---MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G E   +RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   446 VALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 505

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR--DVMMPG-- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR  + M P   
Sbjct:   506 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWMHPQTK 564

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   565 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 624

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   625 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 680

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   681 KKDVEKSLPAKVEQILRMEMSALQKQYY 708

 Score = 147 (56.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
 Identities = 34/78 (43%), Positives = 48/78 (61%)

Query:    22 VSFENSPFYIKGGE---MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G E   +RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   446 VALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 502

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   503 ----NYLFHEHQLYGPFL 516

 Score = 50 (22.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P D R R+ E+E  +EL
Sbjct:  1022 SKNWEEIIPEDQRRRLEEEERQKEL 1046


>ZFIN|ZDB-GENE-040426-892 [details] [associations]
            symbol:chd1l "chromodomain helicase DNA binding
            protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
            [GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
            "ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
            ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
            GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
            HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
            HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
            EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
            ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
            KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
            ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
        Length = 1026

 Score = 519 (187.8 bits), Expect = 7.2e-49, P = 7.2e-49
 Identities = 99/248 (39%), Positives = 154/248 (62%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             +R YQ+ G+ W+    +N    IL DEMGLGKT QTISLL Y +    + GP +V+ P +
Sbjct:    35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLA 94

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKK 300
              L NW  E +++CP+L  IC  GD++ R  + +++     + V +T+YEMC+++    K 
Sbjct:    95 VLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDARYLKS 154

Query:   301 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXX 360
             + W+ LV+DEAHR+KN++S L + ++EF    R+LLTGTP+QNNL E+++LL F+ P   
Sbjct:   155 WKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVF 214

Query:   361 XXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKM 420
                          +   + ++++ LH VL+PFLLRR+K+EV   L  K EL V+ GLS +
Sbjct:   215 LPEAVEDFVNAYADIQTEPALVDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSAL 274

Query:   421 QREWYTKV 428
             Q+ +Y  +
Sbjct:   275 QKRYYKAI 282


>POMBASE|SPAC29B12.01 [details] [associations]
            symbol:ino80 "SNF2 family helicase Ino80" species:4896
            "Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
            EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
            RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
            EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
            OMA:INDHNSA NextBio:20811604 Uniprot:O14148
        Length = 1604

 Score = 518 (187.4 bits), Expect = 2.6e-48, P = 2.6e-48
 Identities = 122/371 (32%), Positives = 192/371 (51%)

Query:    81 RFDYLLKQTEIFSHFM-----TNQGVXXXXXXXXXXXXXXXXXXXX-----XXXXXXXSL 130
             + D+L+ QTE++SHF+       Q +                                ++
Sbjct:   730 KLDFLITQTELYSHFVGRKMDREQDLPSATNTASVSEINFDSDEEEDIRRLAVESAQEAV 789

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEELL-ANANTEGKTIVS-FENSPFYIKGGEMRDYQVRG 188
              K +++    D   + +      ++     N +  T+V+ FE     +   ++++YQ++G
Sbjct:   790 QKAREHSQLFDANRQQSPNNSSSDMNEGEMNFQNPTLVNAFEVKQPKMLMCKLKEYQLKG 849

Query:   189 LNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNE 248
             LNW+ +LYE GINGILADEMGLGKT+Q+IS++ Y+    NI GP +VI P STL NW  E
Sbjct:   850 LNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQE 909

Query:   249 FKKWCPTLRAICLIGDQDARNAM----IRDVMMPGE---WDVCITSYEMCIRERGVFKKF 301
               ++ P L+ I   G    R  +     R  M   E   + V +TSY++ + +   F+  
Sbjct:   910 ITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSV 969

Query:   302 NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXX 361
              W+Y+++DEA  IK+  S   + +  FK  NRLLLTGTP+QN + ELWALL+F++P    
Sbjct:   970 KWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLFD 1029

Query:   362 XXXXXXXWFNTE-EFMGDHSI------IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVY 414
                    WF+ + E     +       ++RLH +LKPF+LRR+K  V+  L  K E +VY
Sbjct:  1030 SHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSELGEKIEKEVY 1089

Query:   415 VGLSKMQREWY 425
               L++ Q+  Y
Sbjct:  1090 CDLTQRQKILY 1100

 Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 32/62 (51%), Positives = 48/62 (77%)

Query:    15 NTEGKTIVS-FENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             N +  T+V+ FE     +   ++++YQ++GLNW+ +LYE GINGILADEMGLGKT+Q+IS
Sbjct:   820 NFQNPTLVNAFEVKQPKMLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSIS 879

Query:    74 LL 75
             ++
Sbjct:   880 VM 881


>UNIPROTKB|O14646 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
            binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=TAS] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
            GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
            KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
            IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
            PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
            PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
            ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
            PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
            Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
            GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
            HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
            HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
            OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
            EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
            ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
            Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
        Length = 1710

 Score = 515 (186.3 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 108/268 (40%), Positives = 165/268 (61%)

Query:   167 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L Y+
Sbjct:   464 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYL 523

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPG---- 279
              H   + GP +++VP STL +W  E + W   + A+  +GD ++RN MIR          
Sbjct:   524 FHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWTHHQTK 582

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++++ +T+YE+ ++++      NW ++ +DEAHR+KN+ S L + + +FK+ +RLL+T
Sbjct:   583 RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 642

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN+L ELW+LL+F++P            F  E   G       LH  L+PFLLRR+
Sbjct:   643 GTPLQNSLKELWSLLHFIMPEKFSSWED----FEEEHGKGREYGYASLHKELEPFLLRRV 698

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L  K E  + + +S +Q+++Y
Sbjct:   699 KKDVEKSLPAKVEQILRMEMSALQKQYY 726

 Score = 148 (57.2 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
 Identities = 35/78 (44%), Positives = 49/78 (62%)

Query:    22 VSFENSPFYIKG--G-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPK 78
             V+ +  P YI G  G E+RDYQ+ GLNW+   +  G + ILADEMGLGKT+QTIS L   
Sbjct:   464 VALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL--- 520

Query:    79 IDRFDYLLKQTEIFSHFM 96
                 +YL  + +++  F+
Sbjct:   521 ----NYLFHEHQLYGPFL 534

 Score = 50 (22.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query:   131 TKEKKNVDPSDHRHRMTEQEEDEEL 155
             +K  + + P D R R+ E+E  +EL
Sbjct:  1040 SKNWEEIIPEDQRRRLEEEERQKEL 1064


>FB|FBgn0086613 [details] [associations]
            symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
            binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
            GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
            GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
            EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
            ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
            PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
            KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
            GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
            OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
            NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
        Length = 1638

 Score = 489 (177.2 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
 Identities = 105/292 (35%), Positives = 165/292 (56%)

Query:   148 EQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADE 207
             E+E+ +E + +   E +  +     P   KG  ++ YQ++G+ W+ ++Y+ GI+GILADE
Sbjct:   503 EEEQAQESVEDIKPEPRPEMKDLPQPKMFKG-TLKGYQIKGMTWLANIYDQGISGILADE 561

Query:   208 MGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDA 267
             MGLGKT+Q+I+ L ++  +  + GP +VI P STL NW  E  ++ P  + +   G   A
Sbjct:   562 MGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSP-A 620

Query:   268 RNAMIRDVM-------MPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSK 320
                ++R              + V ITSY++ + +   F +  W+Y+V+DEA  IK+  S+
Sbjct:   621 ERKILRQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQ 680

Query:   321 LSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFN------TEE 374
               +++  F   NRLLL+GTP+QN++ ELWALL+F++P           WF+       E 
Sbjct:   681 RWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAEN 740

Query:   375 FMG-DHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWY 425
               G D   I RLH +LKPF+LRR+K +VE  L  K E+ VY  L+  Q+  Y
Sbjct:   741 KTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLY 792

 Score = 153 (58.9 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 29/73 (39%), Positives = 49/73 (67%)

Query:     3 EQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADE 62
             E+E+ +E + +   E +  +     P   KG  ++ YQ++G+ W+ ++Y+ GI+GILADE
Sbjct:   503 EEEQAQESVEDIKPEPRPEMKDLPQPKMFKG-TLKGYQIKGMTWLANIYDQGISGILADE 561

Query:    63 MGLGKTLQTISLL 75
             MGLGKT+Q+I+ L
Sbjct:   562 MGLGKTVQSIAFL 574

 Score = 53 (23.7 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
 Identities = 7/19 (36%), Positives = 16/19 (84%)

Query:    81 RFDYLLKQTEIFSHFMTNQ 99
             + ++L+ QTE+++HFM+ +
Sbjct:   417 KLNFLITQTELYAHFMSKK 435


>DICTYBASE|DDB_G0280705 [details] [associations]
            symbol:DDB_G0280705 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
            dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
            GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
            EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
            InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
            Uniprot:Q54UZ8
        Length = 2373

 Score = 315 (115.9 bits), Expect = 3.3e-47, Sum P(3) = 3.3e-47
 Identities = 65/149 (43%), Positives = 95/149 (63%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             +++V IT+YEM I +R    +  W+YLVIDEAHR+KN+  KL+  +R +   + LLLTGT
Sbjct:   625 KFNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTGT 684

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQNN  ELW+LLNFL P            +     + + S +E L ++LKP+LLRR+K 
Sbjct:   685 PLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGD---LKESSQVESLQAILKPYLLRRMKE 741

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              VEK + PK+E  V V L+ +Q+++Y  +
Sbjct:   742 RVEKSIAPKEETIVEVELTTVQKKYYRAI 770

 Score = 211 (79.3 bits), Expect = 3.3e-47, Sum P(3) = 3.3e-47
 Identities = 39/110 (35%), Positives = 62/110 (56%)

Query:   144 HRMTEQEEDEELLANANTEGKTIVSFENSP-FYIKGGEMRDYQVRGLNWMISLYENGING 202
             +++ E    EEL              + SP ++ KG ++R YQ+ GLNW+   +    N 
Sbjct:   471 YKLNEMPSKEELRDKPRPPRTAWKKIDQSPDYFTKGNKLRPYQLEGLNWLSFCWHEQRNS 530

Query:   203 ILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKW 252
             IL DEMGLGKT+Q++S+L  ++    I GP +V+ P +T+ +W  EF+ W
Sbjct:   531 ILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPLTTIPHWKREFENW 580

 Score = 141 (54.7 bits), Expect = 6.2e-38, Sum P(2) = 6.2e-38
 Identities = 29/76 (38%), Positives = 42/76 (55%)

Query:     1 MTEQEEDEELLANANTEGKTIVSFENSP-FYIKGGEMRDYQVRGLNWMISLYENGINGIL 59
             + E    EEL              + SP ++ KG ++R YQ+ GLNW+   +    N IL
Sbjct:   473 LNEMPSKEELRDKPRPPRTAWKKIDQSPDYFTKGNKLRPYQLEGLNWLSFCWHEQRNSIL 532

Query:    60 ADEMGLGKTLQTISLL 75
              DEMGLGKT+Q++S+L
Sbjct:   533 GDEMGLGKTVQSVSIL 548

 Score = 46 (21.3 bits), Expect = 3.3e-47, Sum P(3) = 3.3e-47
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query:   129 SLTKEKKNV--DPSDHRHRMTEQEEDEE 154
             +L K+K NV  +  +     +E EEDEE
Sbjct:   219 ALAKKKNNVQSESEESEESESESEEDEE 246


>UNIPROTKB|E2RG62 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
            [GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
            "nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035861 "site of
            double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000018 "regulation of DNA recombination" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
            GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
            EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
        Length = 1026

 Score = 484 (175.4 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
 Identities = 101/256 (39%), Positives = 153/256 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLIVVPAS 555

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP-GEWDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCPTL+ +C  G Q+ R  +  ++     E++V +T+Y   I    +R 
Sbjct:   556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 615

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K+L PKK
Sbjct:   676 PHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKK 735

Query:   410 ELKVYVGLSKMQREWY 425
             +      +S+ Q + Y
Sbjct:   736 DQIELCAMSEKQEQLY 751

 Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 536

 Score = 40 (19.1 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query:   129 SLTKEKKNVDPS---DHRHRMTEQEEDEELLANANTEGKTIVS-FEN 171
             SL+ E++N + S        +TE+ ED  +      E K  +S F+N
Sbjct:    37 SLSAEEENAEVSRAGTPDSDITEKTEDSSVPETTENERKASISYFKN 83


>UNIPROTKB|J9NX47 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
            EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
            Uniprot:J9NX47
        Length = 1026

 Score = 484 (175.4 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
 Identities = 101/256 (39%), Positives = 153/256 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLIVVPAS 555

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP-GEWDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCPTL+ +C  G Q+ R  +  ++     E++V +T+Y   I    +R 
Sbjct:   556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 615

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K+L PKK
Sbjct:   676 PHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKK 735

Query:   410 ELKVYVGLSKMQREWY 425
             +      +S+ Q + Y
Sbjct:   736 DQIELCAMSEKQEQLY 751

 Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 536

 Score = 40 (19.1 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query:   129 SLTKEKKNVDPS---DHRHRMTEQEEDEELLANANTEGKTIVS-FEN 171
             SL+ E++N + S        +TE+ ED  +      E K  +S F+N
Sbjct:    35 SLSAEEENAEVSRAGTPDSDITEKTEDSSVPETTENERKASISYFKN 81


>UNIPROTKB|J9PA79 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
            OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
            Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
        Length = 1026

 Score = 484 (175.4 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
 Identities = 101/256 (39%), Positives = 153/256 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLIVVPAS 555

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP-GEWDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCPTL+ +C  G Q+ R  +  ++     E++V +T+Y   I    +R 
Sbjct:   556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 615

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K+L PKK
Sbjct:   676 PHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKK 735

Query:   410 ELKVYVGLSKMQREWY 425
             +      +S+ Q + Y
Sbjct:   736 DQIELCAMSEKQEQLY 751

 Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 536

 Score = 40 (19.1 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query:   129 SLTKEKKNVDPS---DHRHRMTEQEEDEELLANANTEGKTIVS-FEN 171
             SL+ E++N + S        +TE+ ED  +      E K  +S F+N
Sbjct:    37 SLSAEEENAEVSRAGTPDSDITEKTEDSSVPETTENERKASISYFKN 83


>ZFIN|ZDB-GENE-081104-186 [details] [associations]
            symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
            GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
            PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
            EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
            Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
        Length = 3108

 Score = 499 (180.7 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
 Identities = 99/266 (37%), Positives = 155/266 (58%)

Query:   164 KTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             +T ++  +SP  +  G +R+YQ  G+ W+ SL+   +NGILADE GLGKT+QT++   ++
Sbjct:  1044 RTTLTSRSSPPSLLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVAYFAHL 1103

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDV 283
                + I GPH+V+V    LLNW  EFK+WCP L+ +  +G +  R         P  + V
Sbjct:  1104 ACNQGIWGPHLVVVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQRRYKRSRWCEPNNFHV 1163

Query:   284 CITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQN 343
             C+TSY++ ++++  F +  W++LV+DE   IKN   K  E +   K+  R+LL  TPLQN
Sbjct:  1164 CVTSYKLLLKDQSHFLRRRWKHLVLDEVQLIKNMTEKHWETIFNIKSQQRILLINTPLQN 1223

Query:   344 NLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKPFLLRRLKSEVE 402
              L ELW +++FLLP              T++     H ++ RLH +++PF+LRR K +VE
Sbjct:  1224 TLKELWTMIHFLLPGITHPYLNFPIKPGTDQNQDYCHKLVIRLHRMIQPFILRRSKRDVE 1283

Query:   403 KRLKPKKELKVYVGLSKMQREWYTKV 428
             K++  K E  +   LSK Q+  Y  +
Sbjct:  1284 KQMPKKYEHILKCRLSKRQKSMYEDI 1309

 Score = 138 (53.6 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 25/55 (45%), Positives = 39/55 (70%)

Query:    19 KTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             +T ++  +SP  +  G +R+YQ  G+ W+ SL+   +NGILADE GLGKT+QT++
Sbjct:  1044 RTTLTSRSSPPSLLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVA 1098

 Score = 40 (19.1 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query:   136 NVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENS 172
             NV  +  R +     E E+  ANAN     + SF  S
Sbjct:     9 NVQRNLQRSKSFTGSEAEQQSANANLPQSPVTSFAPS 45


>UNIPROTKB|Q9H4L7 [details] [associations]
            symbol:SMARCAD1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0009117 "nucleotide metabolic process" evidence=NAS]
            [GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
            "nuclear matrix" evidence=NAS] [GO:0051260 "protein
            homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
            recombination" evidence=IEP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
            modification" evidence=NAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
            "DNA double-strand break processing" evidence=IMP] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
            "site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
            replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
            [GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
            "histone H4 deacetylation" evidence=IMP] [GO:0000792
            "heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
            GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
            GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
            HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
            OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
            EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
            EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
            RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
            RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
            SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
            PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
            Ensembl:ENST00000359052 Ensembl:ENST00000457823
            Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
            UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
            HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
            neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
            HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
            ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
            Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
        Length = 1026

 Score = 480 (174.0 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
 Identities = 101/256 (39%), Positives = 153/256 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-NGPHLIVVPAS 555

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE-WDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCPTL+ +C  G Q+ R  +  ++    E ++V +T+Y   I    +R 
Sbjct:   556 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRS 615

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   616 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 675

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K+L PKK
Sbjct:   676 PHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKK 735

Query:   410 ELKVYVGLSKMQREWY 425
             +      +S+ Q + Y
Sbjct:   736 DRIELCAMSEKQEQLY 751

 Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 536

 Score = 39 (18.8 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query:   129 SLTKEKKNVDPSDHRHR-----MTEQEEDEELLANANTEGKTIVS-FEN 171
             SL+ E++N +    R       +TE+ ED  +    + E K  +S F+N
Sbjct:    37 SLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKN 85


>UNIPROTKB|Q86WJ1 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
            evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
            damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
            catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
            GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
            CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
            EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
            EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
            EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
            IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
            RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
            RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
            ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
            STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
            PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
            Ensembl:ENST00000431239 Ensembl:ENST00000579763
            Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
            KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
            UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
            H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
            MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
            OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
            NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
            Genevestigator:Q86WJ1 Uniprot:Q86WJ1
        Length = 897

 Score = 489 (177.2 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 96/255 (37%), Positives = 150/255 (58%)

Query:   176 IKGGEMRDYQVRGLNWMISLY--ENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPH 233
             + G  +R YQ+ G+NW+   +  +NG   IL DEMGLGKT QTI+L  Y+    N  GP 
Sbjct:    41 LTGIHLRSYQLEGVNWLAQRFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPF 98

Query:   234 IVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR 293
             +++ P S L NW  E +++ P L  +   GD++ R  + +D+     + V +T+YE+C++
Sbjct:    99 LILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLK 158

Query:   294 ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLN 353
             +    K F W  LV+DEAHR+KN+ S L + + EF     LLLTGTP+QN+L EL++LL+
Sbjct:   159 DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLS 218

Query:   354 FLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKV 413
             F+ P               ++   +      LH +L+PFLLRR+K+EV   L  K E+ +
Sbjct:   219 FVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELPKKTEVVI 278

Query:   414 YVGLSKMQREWYTKV 428
             Y G+S +Q+++Y  +
Sbjct:   279 YHGMSALQKKYYKAI 293


>UNIPROTKB|F1MFS2 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
            GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
            OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
            Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
        Length = 896

 Score = 487 (176.5 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 96/255 (37%), Positives = 151/255 (59%)

Query:   176 IKGGEMRDYQVRGLNWMISLY--ENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPH 233
             + G  +R YQ++G+NW+   +  +NG   IL DEMGLGKT QTI+L  Y+    N  GP 
Sbjct:    43 LTGIHLRPYQLQGVNWLAQCFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPF 100

Query:   234 IVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR 293
             +++ P S L NW  E +++ P L  +   GD+D R  + +D+     + V +T+YE+C++
Sbjct:   101 LILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLK 160

Query:   294 ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLN 353
             +    K F W  LV+DEAHR+KN+ S L + + EF     LLLTGTP+QN+L EL++LL+
Sbjct:   161 DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLS 220

Query:   354 FLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKV 413
             F+ P               ++   +      L+ +L+PFLLRR+K+EV   L  K E+ +
Sbjct:   221 FVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELPRKTEVVI 280

Query:   414 YVGLSKMQREWYTKV 428
             Y G+S +Q+++Y  +
Sbjct:   281 YHGMSALQKKYYKAI 295


>UNIPROTKB|Q3B7N1 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
            process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
            remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
            GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
            GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
            UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
            GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
            HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
            NextBio:20874039 Uniprot:Q3B7N1
        Length = 897

 Score = 487 (176.5 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 96/255 (37%), Positives = 151/255 (59%)

Query:   176 IKGGEMRDYQVRGLNWMISLY--ENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPH 233
             + G  +R YQ++G+NW+   +  +NG   IL DEMGLGKT QTI+L  Y+    N  GP 
Sbjct:    43 LTGIHLRPYQLQGVNWLAQCFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPF 100

Query:   234 IVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR 293
             +++ P S L NW  E +++ P L  +   GD+D R  + +D+     + V +T+YE+C++
Sbjct:   101 LILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLK 160

Query:   294 ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLN 353
             +    K F W  LV+DEAHR+KN+ S L + + EF     LLLTGTP+QN+L EL++LL+
Sbjct:   161 DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLS 220

Query:   354 FLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKV 413
             F+ P               ++   +      L+ +L+PFLLRR+K+EV   L  K E+ +
Sbjct:   221 FVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELPRKTEVVI 280

Query:   414 YVGLSKMQREWYTKV 428
             Y G+S +Q+++Y  +
Sbjct:   281 YHGMSALQKKYYKAI 295


>RGD|1311935 [details] [associations]
            symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
            evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
            "response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
            activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
            GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
            IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
            ArrayExpress:D4ACG6 Uniprot:D4ACG6
        Length = 903

 Score = 487 (176.5 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 96/254 (37%), Positives = 151/254 (59%)

Query:   176 IKGGEMRDYQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIAGPHI 234
             + G  +R YQ+ G+NW++  + +G NG IL DEMGLGKT QTI+LL Y+    N  GP +
Sbjct:    35 LTGIRLRSYQLEGVNWLVQCF-HGQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFL 93

Query:   235 VIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRE 294
             ++ P S L NW  E +++ P L  +   GD++ R    +D+     + V +T+YE+C+++
Sbjct:    94 ILCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARRQQDLRQESGFHVLLTTYEICLKD 153

Query:   295 RGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNF 354
                 K F+W  L +DEAHR+KN+ S L   + EF    RLLLTGTP+QN+L EL++LL+ 
Sbjct:   154 ASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLLLTGTPIQNSLQELYSLLSV 213

Query:   355 LLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVY 414
             + P               ++   +      LH +L+PFLLRR+K++V   L  K E+ +Y
Sbjct:   214 VEPDLFCREQVEDFVQCYQDIEKESKSASELHRLLRPFLLRRVKAQVATELPKKTEVVIY 273

Query:   415 VGLSKMQREWYTKV 428
              G+S +Q+++Y  +
Sbjct:   274 HGMSALQKKYYKAI 287

 Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query:    31 IKGGEMRDYQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLL 75
             + G  +R YQ+ G+NW++  + +G NG IL DEMGLGKT QTI+LL
Sbjct:    35 LTGIRLRSYQLEGVNWLVQCF-HGQNGCILGDEMGLGKTCQTIALL 79


>UNIPROTKB|F1Q2U2 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
            GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
            Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
        Length = 898

 Score = 483 (175.1 bits), Expect = 3.5e-45, P = 3.5e-45
 Identities = 96/255 (37%), Positives = 150/255 (58%)

Query:   176 IKGGEMRDYQVRGLNWMISLY--ENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPH 233
             + G  +R YQ+ G+NW+   +  +NG   IL DEMGLGKT QTI+L  Y+    N  GP 
Sbjct:    43 LTGIRLRSYQLEGVNWLARCFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPF 100

Query:   234 IVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR 293
             +++ P S L NW  E +++ P L  +   GD++ R  + +D+     + V +T+YE+C++
Sbjct:   101 LILCPLSVLSNWTEEMERFAPGLSCVMYAGDKEERARLQQDLKQESRFHVLLTTYEICLK 160

Query:   294 ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLN 353
             +    K F W  LV+DEAHR+KN+ S L + + EF     LLLTGTP+QN+L EL++LL+
Sbjct:   161 DSSFLKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLLLTGTPIQNSLQELYSLLS 220

Query:   354 FLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKV 413
             F+ P               ++   +      LH +L+PFLLRR+K+EV   L  K E+ +
Sbjct:   221 FVEPDLFPKEQVGDFVQRYQDIEKESDSASELHKLLQPFLLRRVKAEVATELPKKTEVVL 280

Query:   414 YVGLSKMQREWYTKV 428
             Y G+S +Q+++Y  +
Sbjct:   281 YHGMSALQKKYYKAI 295


>MGI|MGI:1915308 [details] [associations]
            symbol:Chd1l "chromodomain helicase DNA binding protein
            1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
            catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
            GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
            HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
            EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
            EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
            UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
            DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
            PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
            UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
            InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
            Uniprot:Q9CXF7
        Length = 900

 Score = 483 (175.1 bits), Expect = 3.6e-45, P = 3.6e-45
 Identities = 97/255 (38%), Positives = 150/255 (58%)

Query:   176 IKGGEMRDYQVRGLNWMISLY--ENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPH 233
             + G  +R YQ+ G+NW++  +  +NG   IL DEMGLGKT QTI+LL Y+    N  GP 
Sbjct:    35 LTGIRLRSYQLEGVNWLVQCFHCQNGC--ILGDEMGLGKTCQTIALLIYLVGRLNDEGPF 92

Query:   234 IVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR 293
             +V+ P S L NW  E +++ P L  +   GD++ R  + +D+     + V +T+YE+C++
Sbjct:    93 LVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHVLLTTYEICLK 152

Query:   294 ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLN 353
             +    K F+W  L +DEAHR+KN+ S L   + EF    RLLLTGTP+QN+L EL++LL 
Sbjct:   153 DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLC 212

Query:   354 FLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKV 413
              + P               ++   +      LH +L+PFLLRR+K++V   L  K E+ V
Sbjct:   213 VVEPDLFCREQVEDFVQRYQDIEKESKSASELHRLLQPFLLRRVKAQVATELPKKTEVVV 272

Query:   414 YVGLSKMQREWYTKV 428
             Y G+S +Q+++Y  +
Sbjct:   273 YHGMSALQKKYYKAI 287


>UNIPROTKB|F1SDB8 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
            GeneTree:ENSGT00670000098110 EMBL:CU462855
            Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
        Length = 905

 Score = 483 (175.1 bits), Expect = 3.6e-45, P = 3.6e-45
 Identities = 97/255 (38%), Positives = 150/255 (58%)

Query:   176 IKGGEMRDYQVRGLNWMISL--YENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPH 233
             + G  +R YQ+ G+NW+     Y+NG   IL DEMGLGKT QTI++  Y+    N  GP 
Sbjct:    43 LTGIHLRPYQLEGVNWLAQCFHYQNGC--ILGDEMGLGKTCQTIAVFIYLAGRLNDEGPF 100

Query:   234 IVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR 293
             +++ P S L NW  E ++  P L  +   GD++ R  + +D+     + V +T+YE+C++
Sbjct:   101 LILCPLSVLSNWKEEMERCAPGLCCVTYAGDKEERAHLQQDLKQESGFHVLLTTYEICLK 160

Query:   294 ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLN 353
             +    K F W  LV+DEAHR+KN+ S L + + EF    RLLLTGTP+QN+L EL++LL+
Sbjct:   161 DASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTGTPIQNSLQELYSLLS 220

Query:   354 FLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKV 413
             F+ P               E+   +      L+ +L+PFLLRR+K+EV   L  K E+ +
Sbjct:   221 FVEPDLFSKEEVEDFVQRYEDIEKESESASELYKLLQPFLLRRVKAEVAAELPKKTEVVI 280

Query:   414 YVGLSKMQREWYTKV 428
             Y G+S +Q+++Y  +
Sbjct:   281 YHGMSALQKKYYKAI 295


>UNIPROTKB|F1RWW3 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
            "chromosome separation" evidence=IEA] [GO:0043596 "nuclear
            replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035861 "site of
            double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000018 "regulation of DNA recombination" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
            GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
            EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
        Length = 1029

 Score = 484 (175.4 bits), Expect = 4.2e-45, P = 4.2e-45
 Identities = 101/256 (39%), Positives = 153/256 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   500 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLIVVPAS 558

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP-GEWDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCPTL+ +C  G Q+ R  +  ++     E++V +T+Y   I    +R 
Sbjct:   559 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRS 618

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   619 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 678

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K+L PKK
Sbjct:   679 PHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKK 738

Query:   410 ELKVYVGLSKMQREWY 425
             +      +S+ Q + Y
Sbjct:   739 DQIELCAMSEKQEQLY 754

 Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   500 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 539


>UNIPROTKB|F1NH78 [details] [associations]
            symbol:F1NH78 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
            Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
        Length = 1781

 Score = 287 (106.1 bits), Expect = 4.8e-45, Sum P(2) = 4.8e-45
 Identities = 64/148 (43%), Positives = 90/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   ++ V     W  LV+DEAHR+KN +SK   ++  +K   +LLLTGT
Sbjct:   750 KFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 809

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   810 PLQNNLEELFHLLNFLTPERFNNLEGFL-----EEFADISKEDQIKKLHDLLGPHMLRRL 864

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS+MQ+++Y
Sbjct:   865 KADVFKNMPAKTELIVRVELSQMQKKYY 892

 Score = 234 (87.4 bits), Expect = 4.8e-45, Sum P(2) = 4.8e-45
 Identities = 47/111 (42%), Positives = 68/111 (61%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL-GYM 223
             V F+  P+YI   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QTI  L    
Sbjct:   615 VKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLY 674

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
             K   +  GP++V  P ST++NW  EF+ W P    +   GD+++R+ +IR+
Sbjct:   675 KEQGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS-VIRE 724

 Score = 142 (55.0 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
 Identities = 29/56 (51%), Positives = 37/56 (66%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V F+  P+YI   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QTI  L
Sbjct:   615 VKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFL 670


>UNIPROTKB|E1B7X9 [details] [associations]
            symbol:SMARCAD1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
            double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
            break processing" evidence=ISS] [GO:0070933 "histone H4
            deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
            "heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
            evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
            DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
            GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
            GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
            UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
            Uniprot:E1B7X9
        Length = 1028

 Score = 482 (174.7 bits), Expect = 6.9e-45, P = 6.9e-45
 Identities = 101/256 (39%), Positives = 153/256 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   499 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLIVVPAS 557

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP-GEWDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCPTL+ +C  G Q+ R  +  ++     E++V +T+Y   I    +R 
Sbjct:   558 TIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYNVIVTTYNCAISSSDDRS 617

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   618 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVM 677

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K+L PKK
Sbjct:   678 PHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKK 737

Query:   410 ELKVYVGLSKMQREWY 425
             +      +S+ Q + Y
Sbjct:   738 DRIELCAMSEKQEQLY 753

 Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   499 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 538


>UNIPROTKB|E1C188 [details] [associations]
            symbol:Gga.53842 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00717
            GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
            PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 EMBL:AADN02034826 IPI:IPI00592312
            Ensembl:ENSGALT00000003680 ArrayExpress:E1C188 Uniprot:E1C188
        Length = 3044

 Score = 486 (176.1 bits), Expect = 1.7e-44, P = 1.7e-44
 Identities = 106/292 (36%), Positives = 156/292 (53%)

Query:   139 PSDHRHRMTEQEEDEE-LLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYE 197
             P  H   ++E     E LL   ++   T V + N+P  + G  +R+YQ  GL+W+  LY 
Sbjct:  1050 PKKHMRDISEVAAAAEVLLPKGSSRITTAVKY-NTPSLLYG-PLREYQKIGLDWLAKLYR 1107

Query:   198 NGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLR 257
               +NGILADE GLGKT+Q I+   ++       GPH+V+V    +L W  E K+WCP L+
Sbjct:  1108 KNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLK 1167

Query:   258 AICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNE 317
              +   G Q    A  ++   P  ++VCITSY+   +    F K  W+YL++DE  +IKN 
Sbjct:  1168 ILLYFGSQRELRAKRQEWSEPNSFNVCITSYKQLFKGHPAFMKMRWKYLIVDEMQQIKNM 1227

Query:   318 KSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMG 377
               K  E +   ++ +RLLL  TPL N L ELW +++FL+P               EE   
Sbjct:  1228 TEKHWEALFSLRSQHRLLLIDTPLHNTLMELWTMVHFLIPGISRPYLDFPVKAPNEENQD 1287

Query:   378 D-HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               H ++ RLH +++PF+LRR K +VEK+L  K E  +   LS  Q+  Y  V
Sbjct:  1288 YCHKLVIRLHRMIQPFILRRSKRDVEKQLTKKYEHVLKCRLSSRQKAMYEDV 1339

 Score = 138 (53.6 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 30/66 (45%), Positives = 42/66 (63%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E LL   ++   T V + N+P  + G  +R+YQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1065 EVLLPKGSSRITTAVKY-NTPSLLYG-PLREYQKIGLDWLAKLYRKNLNGILADEAGLGK 1122

Query:    68 TLQTIS 73
             T+Q I+
Sbjct:  1123 TVQIIA 1128


>UNIPROTKB|E1C186 [details] [associations]
            symbol:Gga.53842 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
            GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
            GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
            PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:AADN02034826
            IPI:IPI00587546 Ensembl:ENSGALT00000003682 ArrayExpress:E1C186
            Uniprot:E1C186
        Length = 3118

 Score = 486 (176.1 bits), Expect = 1.7e-44, P = 1.7e-44
 Identities = 106/292 (36%), Positives = 156/292 (53%)

Query:   139 PSDHRHRMTEQEEDEE-LLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYE 197
             P  H   ++E     E LL   ++   T V + N+P  + G  +R+YQ  GL+W+  LY 
Sbjct:  1050 PKKHMRDISEVAAAAEVLLPKGSSRITTAVKY-NTPSLLYG-PLREYQKIGLDWLAKLYR 1107

Query:   198 NGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLR 257
               +NGILADE GLGKT+Q I+   ++       GPH+V+V    +L W  E K+WCP L+
Sbjct:  1108 KNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLK 1167

Query:   258 AICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNE 317
              +   G Q    A  ++   P  ++VCITSY+   +    F K  W+YL++DE  +IKN 
Sbjct:  1168 ILLYFGSQRELRAKRQEWSEPNSFNVCITSYKQLFKGHPAFMKMRWKYLIVDEMQQIKNM 1227

Query:   318 KSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMG 377
               K  E +   ++ +RLLL  TPL N L ELW +++FL+P               EE   
Sbjct:  1228 TEKHWEALFSLRSQHRLLLIDTPLHNTLMELWTMVHFLIPGISRPYLDFPVKAPNEENQD 1287

Query:   378 D-HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
               H ++ RLH +++PF+LRR K +VEK+L  K E  +   LS  Q+  Y  V
Sbjct:  1288 YCHKLVIRLHRMIQPFILRRSKRDVEKQLTKKYEHVLKCRLSSRQKAMYEDV 1339

 Score = 138 (53.6 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 30/66 (45%), Positives = 42/66 (63%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E LL   ++   T V + N+P  + G  +R+YQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1065 EVLLPKGSSRITTAVKY-NTPSLLYG-PLREYQKIGLDWLAKLYRKNLNGILADEAGLGK 1122

Query:    68 TLQTIS 73
             T+Q I+
Sbjct:  1123 TVQIIA 1128


>ASPGD|ASPL0000052010 [details] [associations]
            symbol:AN1255 species:162425 "Emericella nidulans"
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
            "mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IEA]
            [GO:0060303 "regulation of nucleosome density" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
            ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
            EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
            OMA:GPRRMAI Uniprot:Q5BDX5
        Length = 1517

 Score = 480 (174.0 bits), Expect = 2.6e-44, P = 2.6e-44
 Identities = 99/271 (36%), Positives = 162/271 (59%)

Query:   164 KTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM 223
             K     + +P ++  G+++++QV+G+N+M   +    N +LADEMGLGKT+QT++ + ++
Sbjct:   429 KPFEPIKGTPSFLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWL 488

Query:   224 KHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIR-DVMMPG--- 279
             +H R   GP +V+VP ST+ +W   F  W P L  +   G++ +RN +   ++M+ G   
Sbjct:   489 RHVRRQQGPFVVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMVDGNPR 548

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               +++V +T+YE  + +     +FNW+++ +DEAHR+KN  S+L   ++EF +  RLL+T
Sbjct:   549 RPKFNVLLTTYEYVLVDSSFLSQFNWQFMAVDEAHRLKNRDSQLYIKLQEFNSPARLLIT 608

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTP+QNNL EL ALL+FL P             N+E       + E L   + PF+LRR 
Sbjct:   609 GTPIQNNLAELSALLDFLNPGLVNVDADMD--LNSEA--ASEKLAE-LTKAISPFMLRRT 663

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             K++VE  L PK E  + V LS +Q E+Y  +
Sbjct:   664 KTKVESDLPPKTEKIIRVELSDVQLEYYKNI 694

 Score = 123 (48.4 bits), Expect = 0.00062, P = 0.00062
 Identities = 21/57 (36%), Positives = 39/57 (68%)

Query:    19 KTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             K     + +P ++  G+++++QV+G+N+M   +    N +LADEMGLGKT+QT++ +
Sbjct:   429 KPFEPIKGTPSFLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFI 485


>ZFIN|ZDB-GENE-050522-499 [details] [associations]
            symbol:smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
            processing" evidence=ISS] [GO:0035861 "site of double-strand break"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
            GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
            HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
            ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
            ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
        Length = 972

 Score = 457 (165.9 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
 Identities = 99/256 (38%), Positives = 152/256 (59%)

Query:   180 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPK 239
             +++ YQ+ GL W+I L+++ ++GILADEMGLGKT+Q I+ L ++ + + I GPH++ VP 
Sbjct:   447 KLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHL-YEKGIKGPHLITVPS 505

Query:   240 STLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPG--EWDVCITSYEMCI---RE 294
             STL NW+ E   WCP+L+ +   G  + R  + +D++  G  ++++ +++Y + I    +
Sbjct:   506 STLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILT-GLIDFNIIVSTYNLTIGNDHD 564

Query:   295 RGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNF 354
             R +F+K   +Y V DE H +KN  S     +      +RLLLTGTPLQNNL EL +LLNF
Sbjct:   565 RSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLLNF 624

Query:   355 LLPXXXXXXXXXXX-WFNT---EEFMGDHSI-IERLHSVLKPFLLRRLKSEVEKRLKPKK 409
             ++P             F+T   EE    H   I +   ++KPF+LRR+KSEV K L PK 
Sbjct:   625 IMPSMFSSSTSQISKMFSTRSSEEESSFHKDRIAQARLIMKPFILRRVKSEVLKELPPKM 684

Query:   410 ELKVYVGLSKMQREWY 425
             E      +S  Q + Y
Sbjct:   685 EKIEMCPMSDAQHKLY 700

 Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
 Identities = 22/41 (53%), Positives = 34/41 (82%)

Query:    35 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             +++ YQ+ GL W+I L+++ ++GILADEMGLGKT+Q I+ L
Sbjct:   447 KLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFL 487

 Score = 44 (20.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+K+ +  SD      E  EDEE
Sbjct:   145 KKKRKIQRSDSSESEDEDSEDEE 167


>RGD|1309640 [details] [associations]
            symbol:Smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
            "regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
            "DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
            "heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
            evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
            evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
            evidence=IEA;ISO] [GO:0051304 "chromosome separation"
            evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
            evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
            evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
            SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
            GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
            OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
            RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
            Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
            UCSC:RGD:1309640 Uniprot:D3Z9Z9
        Length = 1024

 Score = 474 (171.9 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 101/257 (39%), Positives = 152/257 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   495 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN-KGPHLIVVPAS 553

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE-WDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCPTL  +C  G Q+ R  +  ++    E ++V +T+Y   I    +R 
Sbjct:   554 TIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRS 613

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   614 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVM 673

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K L PKK
Sbjct:   674 PHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKK 733

Query:   410 ELKVYVGLSKMQREWYT 426
             +      +S+ Q + Y+
Sbjct:   734 DQIELCAMSEKQEQLYS 750

 Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   495 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 534


>ZFIN|ZDB-GENE-041111-187 [details] [associations]
            symbol:chd4a "chromodomain helicase DNA binding
            protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
            IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
            Bgee:F1QWV5 Uniprot:F1QWV5
        Length = 1930

 Score = 283 (104.7 bits), Expect = 7.4e-44, Sum P(3) = 7.4e-44
 Identities = 64/148 (43%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  V    +W  LV+DEAHR+KN +SK   I+  +   ++LLLTGT
Sbjct:   828 KFHVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYPLQHKLLLTGT 887

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   888 PLQNNLEELFHLLNFLTPERFSNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 942

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   943 KADVFKHMPSKTELIVRVELSPMQKKYY 970

 Score = 234 (87.4 bits), Expect = 7.4e-44, Sum P(3) = 7.4e-44
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             + FE  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   694 IKFERQPDYLDTTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 753

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   754 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AVIRE 802

 Score = 133 (51.9 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             + FE  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   694 IKFERQPDYLDTTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 749

 Score = 44 (20.5 bits), Expect = 7.4e-44, Sum P(3) = 7.4e-44
 Identities = 12/24 (50%), Positives = 12/24 (50%)

Query:   138 DPSDHRHRMTEQEED---EELLAN 158
             D  D  HR   QEED   EEL  N
Sbjct:     7 DRDDFEHRSVMQEEDDLEEELSEN 30


>UNIPROTKB|F1NVT7 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
            EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
            Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
        Length = 1257

 Score = 473 (171.6 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 111/273 (40%), Positives = 162/273 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  +     I
Sbjct:   372 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLMGI 430

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA-----MI-RDVM---MPG- 279
              GP ++I P ST+ NW  EF+ W   + AI   G Q +R       M+ RD     +PG 
Sbjct:   431 HGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGI 489

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++ V IT++EM + +    KK  WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:   490 FKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTG 549

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD---HSIIERLHSVLKPFLLR 395
             TPLQN++ EL++LLNFL P               EEF GD      +++L S+LKP +LR
Sbjct:   550 TPLQNSVEELFSLLNFLEPQQFPSETAFL-----EEF-GDLKTEEQVKKLQSILKPMMLR 603

Query:   396 RLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             RLK +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   604 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI 636

 Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   372 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFL 422


>MGI|MGI:95453 [details] [associations]
            symbol:Smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
            of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000729 "DNA double-strand break
            processing" evidence=ISO] [GO:0000792 "heterochromatin"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
            "response to DNA damage stimulus" evidence=IEA] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0035861 "site of double-strand break"
            evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
            [GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
            "histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
            deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
            KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
            CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
            EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
            IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
            UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
            PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
            Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
            UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
            NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
            GermOnline:ENSMUSG00000029920 Uniprot:Q04692
        Length = 1021

 Score = 470 (170.5 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 100/257 (38%), Positives = 152/257 (59%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L Y+    N  GPH+++VP S
Sbjct:   492 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN-KGPHLIVVPAS 550

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE-WDVCITSYEMCIR---ERG 296
             T+ NW+ E   WCP+L  +C  G Q+ R  +  ++    E ++V +T+Y   I    +R 
Sbjct:   551 TIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRS 610

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    Y + DE H +KN  S   + +      NRLLLTGTP+QNNL EL +LLNF++
Sbjct:   611 LFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVM 670

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+K EV K L PKK
Sbjct:   671 PHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKK 730

Query:   410 ELKVYVGLSKMQREWYT 426
             +      +S+ Q + Y+
Sbjct:   731 DRIELCAMSEKQEQLYS 747

 Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query:    36 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             ++ YQ  GLNW+  ++++G+NGILADEMGLGKT+Q I+ L
Sbjct:   492 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFL 531


>UNIPROTKB|F1NLW6 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
            EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
            ArrayExpress:F1NLW6 Uniprot:F1NLW6
        Length = 2005

 Score = 473 (171.6 bits), Expect = 2.3e-43, P = 2.3e-43
 Identities = 111/273 (40%), Positives = 162/273 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  +     I
Sbjct:   247 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLMGI 305

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA-----MI-RDVM---MPG- 279
              GP ++I P ST+ NW  EF+ W   + AI   G Q +R       M+ RD     +PG 
Sbjct:   306 HGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGI 364

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++ V IT++EM + +    KK  WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:   365 FKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTG 424

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD---HSIIERLHSVLKPFLLR 395
             TPLQN++ EL++LLNFL P               EEF GD      +++L S+LKP +LR
Sbjct:   425 TPLQNSVEELFSLLNFLEPQQFPSETAFL-----EEF-GDLKTEEQVKKLQSILKPMMLR 478

Query:   396 RLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             RLK +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   479 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI 511

 Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   247 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFL 297


>UNIPROTKB|F1NLV5 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
            EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
            Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
        Length = 2007

 Score = 473 (171.6 bits), Expect = 2.3e-43, P = 2.3e-43
 Identities = 111/273 (40%), Positives = 162/273 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  +     I
Sbjct:   247 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLMGI 305

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA-----MI-RDVM---MPG- 279
              GP ++I P ST+ NW  EF+ W   + AI   G Q +R       M+ RD     +PG 
Sbjct:   306 HGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGI 364

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++ V IT++EM + +    KK  WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:   365 FKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTG 424

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD---HSIIERLHSVLKPFLLR 395
             TPLQN++ EL++LLNFL P               EEF GD      +++L S+LKP +LR
Sbjct:   425 TPLQNSVEELFSLLNFLEPQQFPSETAFL-----EEF-GDLKTEEQVKKLQSILKPMMLR 478

Query:   396 RLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             RLK +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   479 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI 511

 Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   247 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFL 297


>TAIR|locus:2040184 [details] [associations]
            symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
            auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
            root development" evidence=IMP] [GO:0009788 "negative regulation of
            abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=RCA]
            [GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
            proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
            stimulus" evidence=IMP] [GO:0048364 "root development"
            evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
            GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
            GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
            PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
            ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
            PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
            KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
            PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
            GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
        Length = 1384

 Score = 295 (108.9 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
 Identities = 64/151 (42%), Positives = 92/151 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++DV +TSYEM   +  V K   W  +++DE HR+KN+ SKL   + ++ + +R+LLTGT
Sbjct:   393 KFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGT 452

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ L++FL              F  EEF  +     I RLH +L P LLRR+
Sbjct:   453 PLQNNLDELFMLMHFL----DAGKFGSLEEFQ-EEFKDINQEEQISRLHKMLAPHLLRRV 507

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             K +V K + PKKEL + V LS +Q+E+Y  +
Sbjct:   508 KKDVMKDMPPKKELILRVDLSSLQKEYYKAI 538

 Score = 207 (77.9 bits), Expect = 2.4e-43, Sum P(2) = 2.4e-43
 Identities = 45/106 (42%), Positives = 66/106 (62%)

Query:   169 FENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRN 228
             F+++P ++KG  +  YQ+ GLN++   +    + ILADEMGLGKT+Q+I+LL  +    N
Sbjct:   262 FDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFE-EN 319

Query:   229 IAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
             +  PH+VI P STL NW  EF  W P +  +   G   AR A+IR+
Sbjct:   320 LI-PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQAR-AVIRE 363

 Score = 116 (45.9 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
 Identities = 24/52 (46%), Positives = 38/52 (73%)

Query:    24 FENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             F+++P ++KG  +  YQ+ GLN++   +    + ILADEMGLGKT+Q+I+LL
Sbjct:   262 FDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALL 312


>WB|WBGene00000482 [details] [associations]
            symbol:chd-3 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
            [GO:0040027 "negative regulation of vulval development"
            evidence=IMP] [GO:0046580 "negative regulation of Ras protein
            signal transduction" evidence=IMP] [GO:0001709 "cell fate
            determination" evidence=IMP] [GO:0000118 "histone deacetylase
            complex" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
            EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
            UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
            STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
            KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
            HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            Uniprot:Q22516
        Length = 1787

 Score = 285 (105.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 63/150 (42%), Positives = 92/150 (61%)

Query:   280 EWDVCITSYEMCIR-ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             ++ V +TSYE CI  ++ +    +W  LV+DEAHR+KN +S   + +RE+    R+LLTG
Sbjct:   734 KFHVLLTSYE-CINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTG 792

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQNNL EL+ LLNFL P            F+    +     IE+LH++L P +LRRLK
Sbjct:   793 TPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE---ISKEDQIEKLHNLLGPHMLRRLK 849

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             ++V   +  K+EL V V LS MQ+++Y  +
Sbjct:   850 ADVLTGMPSKQELIVRVELSAMQKKYYKNI 879

 Score = 231 (86.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 46/128 (35%), Positives = 74/128 (57%)

Query:   150 EEDEELLANANTEGKTIVS-FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILAD 206
             +EDE        E   I+  +E  P +I   GG +  YQ+ G+NW+   + NG + ILAD
Sbjct:   582 KEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILAD 641

Query:   207 EMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQD 266
             EMGLGKT+Q+++ L  +    +  GP ++  P ST++NW  E + WCP    +  +GD++
Sbjct:   642 EMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRE 701

Query:   267 ARNAMIRD 274
             +R  +IR+
Sbjct:   702 SR-MVIRE 708

 Score = 139 (54.0 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query:     5 EEDEELLANANTEGKTIVS-FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILAD 61
             +EDE        E   I+  +E  P +I   GG +  YQ+ G+NW+   + NG + ILAD
Sbjct:   582 KEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILAD 641

Query:    62 EMGLGKTLQTISLL 75
             EMGLGKT+Q+++ L
Sbjct:   642 EMGLGKTVQSLTFL 655


>UNIPROTKB|Q22516 [details] [associations]
            symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
            homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
            duplex unwinding" evidence=ISS] InterPro:IPR001841
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
            GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
            GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
            PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
            ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
            EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
            UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
            InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
        Length = 1787

 Score = 285 (105.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 63/150 (42%), Positives = 92/150 (61%)

Query:   280 EWDVCITSYEMCIR-ERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             ++ V +TSYE CI  ++ +    +W  LV+DEAHR+KN +S   + +RE+    R+LLTG
Sbjct:   734 KFHVLLTSYE-CINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTG 792

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQNNL EL+ LLNFL P            F+    +     IE+LH++L P +LRRLK
Sbjct:   793 TPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE---ISKEDQIEKLHNLLGPHMLRRLK 849

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             ++V   +  K+EL V V LS MQ+++Y  +
Sbjct:   850 ADVLTGMPSKQELIVRVELSAMQKKYYKNI 879

 Score = 231 (86.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 46/128 (35%), Positives = 74/128 (57%)

Query:   150 EEDEELLANANTEGKTIVS-FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILAD 206
             +EDE        E   I+  +E  P +I   GG +  YQ+ G+NW+   + NG + ILAD
Sbjct:   582 KEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILAD 641

Query:   207 EMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQD 266
             EMGLGKT+Q+++ L  +    +  GP ++  P ST++NW  E + WCP    +  +GD++
Sbjct:   642 EMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRE 701

Query:   267 ARNAMIRD 274
             +R  +IR+
Sbjct:   702 SR-MVIRE 708

 Score = 139 (54.0 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query:     5 EEDEELLANANTEGKTIVS-FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILAD 61
             +EDE        E   I+  +E  P +I   GG +  YQ+ G+NW+   + NG + ILAD
Sbjct:   582 KEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILAD 641

Query:    62 EMGLGKTLQTISLL 75
             EMGLGKT+Q+++ L
Sbjct:   642 EMGLGKTVQSLTFL 655


>UNIPROTKB|Q5FWR0 [details] [associations]
            symbol:smarcad1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
            [GO:0000729 "DNA double-strand break processing" evidence=ISS]
            [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
            HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
            EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
            RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
            GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
            InParanoid:Q5FWR0 Uniprot:Q5FWR0
        Length = 1003

 Score = 457 (165.9 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 97/257 (37%), Positives = 156/257 (60%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++ YQ  GLNW+  L+++ +N ILADEMGLGKT+Q I+ L ++ +    +GPH+V+VP S
Sbjct:   474 LKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHL-YVTGDSGPHLVVVPAS 532

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPG-EWDVCITSYEMCI---RERG 296
             T+ NW+ EF +WCP++  +   G Q+ R  +  D++    E++V +T+Y   I    +R 
Sbjct:   533 TMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTYNCAISSAEDRS 592

Query:   297 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLL 356
             +F++    + V DE H +KN  +   + +      +RLLLTGTP+QNNL EL +LLNF++
Sbjct:   593 LFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLELMSLLNFVM 652

Query:   357 PXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKPKK 409
             P             F+++    D   I   ER+ H+  ++KPF+LRR+KSEV K+L PK+
Sbjct:   653 PHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFILRRVKSEVLKQLPPKQ 712

Query:   410 ELKVYVGLSKMQREWYT 426
             +   +  +SK Q + Y+
Sbjct:   713 DKIKFCQMSKKQEQLYS 729

 Score = 37 (18.1 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 8/26 (30%), Positives = 17/26 (65%)

Query:   131 TKEKKNVD--PSDHRHRMTEQEEDEE 154
             TK+KK +D   SD+   ++E + +++
Sbjct:   197 TKKKKKIDRVSSDNDSSLSEDDWEKQ 222


>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
            symbol:chd4b "chromodomain helicase DNA binding
            protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
            IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
            Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
            KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
        Length = 1953

 Score = 282 (104.3 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
 Identities = 62/148 (41%), Positives = 90/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   ++ +    +W  LV+DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   854 KFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGT 913

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   914 PLQNNLEELFHLLNFLTPERFNNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 968

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   969 KADVFKHMPSKTELIVRVELSPMQKKYY 996

 Score = 232 (86.7 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
 Identities = 47/118 (39%), Positives = 69/118 (58%)

Query:   159 ANTEGKTIVSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQT 216
             AN      + F+  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT
Sbjct:   712 ANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQT 771

Query:   217 ISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                L  +    +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   772 AVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AVIRE 828

 Score = 131 (51.2 bits), Expect = 3.1e-32, Sum P(3) = 3.1e-32
 Identities = 28/64 (43%), Positives = 37/64 (57%)

Query:    14 ANTEGKTIVSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQT 71
             AN      + F+  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT
Sbjct:   712 ANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQT 771

Query:    72 ISLL 75
                L
Sbjct:   772 AVFL 775

 Score = 43 (20.2 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:   145 RMTEQEEDEELLANANTEG 163
             RM E EE+E+ +  + +EG
Sbjct:    67 RMAEGEEEEDRVMRSESEG 85

 Score = 38 (18.4 bits), Expect = 9.9e-43, Sum P(3) = 9.9e-43
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query:     1 MTEQEEDEELLANANTEG 18
             M E EE+E+ +  + +EG
Sbjct:    68 MAEGEEEEDRVMRSESEG 85

 Score = 38 (18.4 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
 Identities = 28/124 (22%), Positives = 50/124 (40%)

Query:   300 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXX 359
             KF    L  DE     N++   S I  + K  +RLL        +  EL ++  +L    
Sbjct:  1230 KFGTEQLFKDELGEGDNKEEDSSVIHYDDKAIDRLLDRNQDATEDT-ELQSMNEYLSSFK 1288

Query:   360 XXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSK 419
                        + EE   D  II++  SV   +  + L+   E++   +++L  ++G  K
Sbjct:  1289 VAQYVVKDE--DEEEEDVDREIIKQEESVDPDYWEKLLRHHYEQQ---QEDLARHLGKGK 1343

Query:   420 MQRE 423
               R+
Sbjct:  1344 RPRK 1347


>FB|FBgn0250786 [details] [associations]
            symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
            species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
            chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
            evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
            exchange of chromosomal proteins" evidence=IMP] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
            morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
            GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
            InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
            InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
            RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
            STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
            GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
            FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
            KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
            GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
            GO:GO:0035042 Uniprot:Q7KU24
        Length = 1883

 Score = 470 (170.5 bits), Expect = 4.3e-43, P = 4.3e-43
 Identities = 102/267 (38%), Positives = 159/267 (59%)

Query:   170 ENSPFYIKGG-EMRDYQVRGLNWMISLY--ENGINGILADEMGLGKTLQTISLLGYMKHY 226
             +N P ++  G  +RDYQ+ GLNW++  +  EN +  ILADEMGLGKT+QTI  L  +   
Sbjct:   516 KNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSV--ILADEMGLGKTIQTICFLYSLFKI 573

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE------ 280
              ++ GP + +VP ST+  W  EF  W P +  +  +GD  +R  +I+      E      
Sbjct:   574 HHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRE-LIQQYEWQFESSKRLK 632

Query:   281 WDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 340
             ++  +T+YE+ ++++       W  L++DEAHR+KN+ S L + ++EF T +RLL+TGTP
Sbjct:   633 FNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTP 692

Query:   341 LQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMG--DHSIIERLHSVLKPFLLRRLK 398
             LQN+L ELWALL+F++P           W N E   G  +     RLH  L+P++LRR+K
Sbjct:   693 LQNSLKELWALLHFIMPDKFDT------WENFEVQHGNAEDKGYTRLHQQLEPYILRRVK 746

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWY 425
              +VEK L  K E  + V ++ +Q+++Y
Sbjct:   747 KDVEKSLPAKVEQILRVEMTSLQKQYY 773

 Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query:    25 ENSPFYIKGG-EMRDYQVRGLNWMISLY--ENGINGILADEMGLGKTLQTISLL 75
             +N P ++  G  +RDYQ+ GLNW++  +  EN +  ILADEMGLGKT+QTI  L
Sbjct:   516 KNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSV--ILADEMGLGKTIQTICFL 567


>ZFIN|ZDB-GENE-091113-61 [details] [associations]
            symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
            "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=ISS]
            [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
            EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
            Bgee:E7F1C4 Uniprot:E7F1C4
        Length = 954

 Score = 464 (168.4 bits), Expect = 4.9e-43, P = 4.9e-43
 Identities = 99/256 (38%), Positives = 150/256 (58%)

Query:   180 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPK 239
             +++ YQ+ GLNW++ L++N ++GILADEMGLGKT+Q IS L ++    N  GPH++ VP 
Sbjct:   428 QLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGN-HGPHLITVPA 486

Query:   240 STLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP-GEWDVCITSYEMCI---RER 295
             STL NW+ E   WCP+ + +   G  D R  M  +++    E+++ +++Y + I    +R
Sbjct:   487 STLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIVEYNIIVSTYNLAIGNSSDR 546

Query:   296 GVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFL 355
              +F K    Y V DE H +KN  S     +       RLLLTGTPLQNNL EL +LLNF+
Sbjct:   547 SLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNFI 606

Query:   356 LPXXXXXXXXXXXWFNTEEFMGDHSIIER---LHS--VLKPFLLRRLKSEVEKRLKPKKE 410
             +P              + +   + S  ER    H+  ++KPF+LRR+KSEV K+L  K+E
Sbjct:   607 MPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAKLIMKPFILRRVKSEVLKQLPAKEE 666

Query:   411 LKVYVGLSKMQREWYT 426
                +  +S+ Q+E Y+
Sbjct:   667 QVEFCAMSERQQELYS 682

 Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 24/41 (58%), Positives = 35/41 (85%)

Query:    35 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             +++ YQ+ GLNW++ L++N ++GILADEMGLGKT+Q IS L
Sbjct:   428 QLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFL 468


>FB|FBgn0086902 [details] [associations]
            symbol:kis "kismet" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
            specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
            response" evidence=IMP] [GO:0007298 "border follicle cell
            migration" evidence=IMP] [GO:0005875 "microtubule associated
            complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
            [GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0007614 "short-term memory"
            evidence=IMP] [GO:0046622 "positive regulation of organ growth"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
            wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
            organization" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
            EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
            GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
            GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
            GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
            KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
            UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
            EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
            CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
            PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
            Uniprot:B7Z002
        Length = 5517

 Score = 473 (171.6 bits), Expect = 8.1e-43, P = 8.1e-43
 Identities = 107/268 (39%), Positives = 158/268 (58%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E +P Y  G  +R YQ+ GLNW+   + N  N ILADEMGLGKT+Q+++ +  +  Y  I
Sbjct:  2018 EKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEY-GI 2076

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD-----------VMM- 277
              GP +VI P ST+ NW  EF+ W   +  +   G   ++  MI+D           V+  
Sbjct:  2077 RGPFLVIAPLSTIPNWQREFEGWTD-MNVVVYHGSVTSKQ-MIQDYEYYYKTESGKVLKE 2134

Query:   278 PGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
             P +++V IT++EM + +    K FNWR  VIDEAHR+KN   KL E +R+    +R+LL+
Sbjct:  2135 PIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLS 2194

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQNN+ EL++LLNFL P            F +   +     + +L ++LKP +LRRL
Sbjct:  2195 GTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGS---LRTEEEVNKLQALLKPMMLRRL 2251

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K +VEK L PK+E  + V L+ +Q+++Y
Sbjct:  2252 KDDVEKSLAPKEETIIEVELTNIQKKYY 2279

 Score = 131 (51.2 bits), Expect = 0.00033, P = 0.00033
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E +P Y  G  +R YQ+ GLNW+   + N  N ILADEMGLGKT+Q+++ +
Sbjct:  2018 EKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFV 2068


>UNIPROTKB|F1NS62 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
            EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
            Ensembl:ENSGALT00000024254 Uniprot:F1NS62
        Length = 895

 Score = 458 (166.3 bits), Expect = 1.8e-42, P = 1.8e-42
 Identities = 97/270 (35%), Positives = 156/270 (57%)

Query:   159 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 218
             A   G  +   + S + + G ++R YQ+ G+NW++  Y+     IL DEMGLGKT QTIS
Sbjct:    24 ARAGGLGVQEEDVSRWGLTGIKLRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTIS 83

Query:   219 LLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMP 278
             LL Y+          +++ P S L NW  E +++ P L  +  +G+++ R  + +++   
Sbjct:    84 LLLYLTKKLTNKERSLILCPLSVLSNWKEELERFAPGLSFVTYVGNKEERYKLQQNLKEQ 143

Query:   279 GEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
               + V +T+YE+C+++    K F+W  LV+DEAHR+KN+ S L E + E      LLLTG
Sbjct:   144 SHFRVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLLLTG 203

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TP+QN+L EL++LL+F+ P               +    +    + LH++L+PFLLRR+K
Sbjct:   204 TPIQNSLQELYSLLSFIEPDIFPRKQVKEFVEYYQAVEKESEPAKELHNLLQPFLLRRVK 263

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             SEV   L  K E+ +Y G+S +QR++Y  +
Sbjct:   264 SEVTADLPKKVEVVLYHGMSALQRKYYKAI 293

 Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
 Identities = 27/62 (43%), Positives = 38/62 (61%)

Query:    14 ANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             A   G  +   + S + + G ++R YQ+ G+NW++  Y+     IL DEMGLGKT QTIS
Sbjct:    24 ARAGGLGVQEEDVSRWGLTGIKLRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTIS 83

Query:    74 LL 75
             LL
Sbjct:    84 LL 85


>UNIPROTKB|E9PU01 [details] [associations]
            symbol:Chd4 "Protein Chd4" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
            ArrayExpress:E9PU01 Uniprot:E9PU01
        Length = 1915

 Score = 278 (102.9 bits), Expect = 2.0e-42, Sum P(4) = 2.0e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 896

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   897 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 951

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   952 KADVFKNMPSKTELIVRVELSPMQKKYY 979

 Score = 232 (86.7 bits), Expect = 2.0e-42, Sum P(4) = 2.0e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   703 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 762

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   763 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 811

 Score = 131 (51.2 bits), Expect = 5.0e-31, Sum P(3) = 5.0e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   703 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 758

 Score = 42 (19.8 bits), Expect = 2.0e-42, Sum P(4) = 2.0e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   108 KKKKKLGPKKEKKSKSKRKEEEE 130

 Score = 37 (18.1 bits), Expect = 2.0e-42, Sum P(4) = 2.0e-42
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:     5 EEDEELLANANTEG 18
             EEDEE    +++EG
Sbjct:    87 EEDEEAALRSDSEG 100

 Score = 37 (18.1 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:   150 EEDEELLANANTEG 163
             EEDEE    +++EG
Sbjct:    87 EEDEEAALRSDSEG 100


>UNIPROTKB|F1LM59 [details] [associations]
            symbol:Chd4 "Protein Chd4" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
            ArrayExpress:F1LM59 Uniprot:F1LM59
        Length = 1945

 Score = 278 (102.9 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   865 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 924

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   925 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 979

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   980 KADVFKNMPSKTELIVRVELSPMQKKYY 1007

 Score = 232 (86.7 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   731 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 790

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   791 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 839

 Score = 131 (51.2 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   731 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 786

 Score = 42 (19.8 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   136 KKKKKLGPKKEKKSKSKRKEEEE 158

 Score = 40 (19.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELL-----ANANTEGKTIVSFENSPFYIKGGEMRDY 184
             L K+KK   P D +   +++++ E LL      +++ EG   V  +         E  DY
Sbjct:    72 LKKKKKPKKPRDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEDEEAALRSDSEGSDY 131

 Score = 37 (18.1 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:     5 EEDEELLANANTEG 18
             EEDEE    +++EG
Sbjct:   115 EEDEEAALRSDSEG 128


>UNIPROTKB|F1NH79 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
            EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
            Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
        Length = 1895

 Score = 278 (102.9 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   814 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 873

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   874 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 928

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   929 KADVFKNMPSKTELIVRVELSPMQKKYY 956

 Score = 230 (86.0 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
 Identities = 45/110 (40%), Positives = 67/110 (60%)

Query:   167 VSFENSPFY--IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V ++  P Y  + GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   680 VKYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 739

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   740 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 788

 Score = 129 (50.5 bits), Expect = 3.0e-31, Sum P(3) = 3.0e-31
 Identities = 26/56 (46%), Positives = 35/56 (62%)

Query:    22 VSFENSPFY--IKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V ++  P Y  + GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   680 VKYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 735

 Score = 41 (19.5 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query:     3 EQEEDEELLANANT 16
             E+E +EELL+ A T
Sbjct:     4 EEEPEEELLSEAET 17

 Score = 41 (19.5 bits), Expect = 9.6e-42, Sum P(3) = 9.6e-42
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query:   148 EQEEDEELLANANT 161
             E+E +EELL+ A T
Sbjct:     4 EEEPEEELLSEAET 17

 Score = 39 (18.8 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query:   132 KEKKNVDPSDHRHRMTE--QEEDEE 154
             K+KK + P   +    +  +EEDEE
Sbjct:    84 KKKKKLGPKKEKKSKAKRKEEEDEE 108


>UNIPROTKB|F1PTH3 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
            EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
            Uniprot:F1PTH3
        Length = 2715

 Score = 465 (168.7 bits), Expect = 2.4e-42, P = 2.4e-42
 Identities = 109/273 (39%), Positives = 162/273 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  +   R I
Sbjct:   450 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLRGI 508

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA-----MI-RDVM---MPG- 279
              GP ++I P ST+ NW  EF+ W   + AI   G Q +R       M+ RD     + G 
Sbjct:   509 HGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV 567

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++ V IT++EM + +    KK +W  ++IDEAHR+KN   KL E ++     +++LLTG
Sbjct:   568 FKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTG 627

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD---HSIIERLHSVLKPFLLR 395
             TPLQN++ EL++LLNFL P               EEF GD      +++L S+LKP +LR
Sbjct:   628 TPLQNSVEELFSLLNFLEPSQFPSETAFL-----EEF-GDLKTEEQVKKLQSILKPMMLR 681

Query:   396 RLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             RLK +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   682 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI 714

 Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   450 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFL 500


>UNIPROTKB|J9P0F6 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
            EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
            Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
            Uniprot:J9P0F6
        Length = 2715

 Score = 465 (168.7 bits), Expect = 2.4e-42, P = 2.4e-42
 Identities = 109/273 (39%), Positives = 162/273 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  +   R I
Sbjct:   450 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLRGI 508

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA-----MI-RDVM---MPG- 279
              GP ++I P ST+ NW  EF+ W   + AI   G Q +R       M+ RD     + G 
Sbjct:   509 HGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV 567

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++ V IT++EM + +    KK +W  ++IDEAHR+KN   KL E ++     +++LLTG
Sbjct:   568 FKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTG 627

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD---HSIIERLHSVLKPFLLR 395
             TPLQN++ EL++LLNFL P               EEF GD      +++L S+LKP +LR
Sbjct:   628 TPLQNSVEELFSLLNFLEPSQFPSETAFL-----EEF-GDLKTEEQVKKLQSILKPMMLR 681

Query:   396 RLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             RLK +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   682 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI 714

 Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   450 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFL 500


>UNIPROTKB|Q8TD26 [details] [associations]
            symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
            "chromatin binding" evidence=NAS] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
            EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
            EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
            EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
            RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
            PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
            MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
            PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
            Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
            KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
            GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
            HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
            HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
            OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
            EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
            ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
            Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
        Length = 2715

 Score = 465 (168.7 bits), Expect = 2.4e-42, P = 2.4e-42
 Identities = 109/273 (39%), Positives = 162/273 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  +   R I
Sbjct:   450 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLRGI 508

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA-----MI-RDVM---MPG- 279
              GP ++I P ST+ NW  EF+ W   + AI   G Q +R       M+ RD     + G 
Sbjct:   509 HGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV 567

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++ V IT++EM + +    KK +W  ++IDEAHR+KN   KL E ++     +++LLTG
Sbjct:   568 FKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTG 627

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD---HSIIERLHSVLKPFLLR 395
             TPLQN++ EL++LLNFL P               EEF GD      +++L S+LKP +LR
Sbjct:   628 TPLQNSVEELFSLLNFLEPSQFPSETAFL-----EEF-GDLKTEEQVKKLQSILKPMMLR 681

Query:   396 RLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             RLK +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   682 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI 714


>UNIPROTKB|F1N734 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
            EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
            EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
            ArrayExpress:F1N734 Uniprot:F1N734
        Length = 2720

 Score = 465 (168.7 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 109/273 (39%), Positives = 162/273 (59%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  +   R I
Sbjct:   449 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLRGI 507

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNA-----MI-RDVM---MPG- 279
              GP ++I P ST+ NW  EF+ W   + AI   G Q +R       M+ RD     + G 
Sbjct:   508 HGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV 566

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++ V IT++EM + +    KK +W  ++IDEAHR+KN   KL E ++     +++LLTG
Sbjct:   567 FKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTG 626

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD---HSIIERLHSVLKPFLLR 395
             TPLQN++ EL++LLNFL P               EEF GD      +++L S+LKP +LR
Sbjct:   627 TPLQNSVEELFSLLNFLEPSQFPSETAFL-----EEF-GDLKTEEQVKKLQSILKPMMLR 680

Query:   396 RLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             RLK +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   681 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI 713

 Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   449 EKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFL 499


>UNIPROTKB|A7E2D7 [details] [associations]
            symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
            GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            EMBL:AC137590 EMBL:AC137632 IPI:IPI00798339 UniGene:Hs.595201
            HGNC:HGNC:11958 HOVERGEN:HBG051488 ChiTaRS:EP400 EMBL:AC131009
            EMBL:BC150291 STRING:A7E2D7 Ensembl:ENST00000542457
            HOGENOM:HOG000293317 Uniprot:A7E2D7
        Length = 1731

 Score = 461 (167.3 bits), Expect = 3.4e-42, P = 3.4e-42
 Identities = 103/277 (37%), Positives = 144/277 (51%)

Query:   153 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 212
             E +L   +    T V F N+P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1029 EAILPKGSARVTTSVKF-NAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1086

Query:   213 TLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMI 272
             T+Q I+   ++       GPH+V+V    +L W  E K+WCP L+ +  IG      A  
Sbjct:  1087 TVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKR 1146

Query:   273 RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             ++   P  + VCITSY    R    F +  W+ LVIDE  R+K    +  E V   ++  
Sbjct:  1147 QEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQ 1206

Query:   333 RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKP 391
             RLLL  +PL N   ELW +++FL+P              +EE     H ++ RLH V +P
Sbjct:  1207 RLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQP 1266

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             F+LRR K +VEK+L  K E  +   LS  Q+  Y  V
Sbjct:  1267 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDV 1303

 Score = 144 (55.7 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 31/66 (46%), Positives = 41/66 (62%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E +L   +    T V F N+P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1029 EAILPKGSARVTTSVKF-NAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1086

Query:    68 TLQTIS 73
             T+Q I+
Sbjct:  1087 TVQIIA 1092


>WB|WBGene00007053 [details] [associations]
            symbol:chd-7 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
            EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
            EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
            UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
            InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
        Length = 2967

 Score = 463 (168.0 bits), Expect = 4.5e-42, P = 4.5e-42
 Identities = 116/314 (36%), Positives = 173/314 (55%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGL 189
             L +E++ +DP+  R +   + E+ + ++ +         ++N      G  +R+YQ  G+
Sbjct:  1159 LWRERQVIDPAKIREKQRPEPEEWKKMSTSKV-------WKN------GNSLREYQFEGV 1205

Query:   190 NWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEF 249
             +W++  Y N  N ILADEMGLGKT+QTI+ L  +  Y  I GP +V+VP ST+ NW+ EF
Sbjct:  1206 DWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDY-GIHGPFLVVVPLSTIQNWVREF 1264

Query:   250 KKWCPTLRAICLIGDQDARNAMIR-----DVMMPG--EW-------DVCITSYEMCIRER 295
             + W   + AI   G   AR  + +     D    G   W       D  IT++E  + + 
Sbjct:  1265 ETWTD-MNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSDV 1323

Query:   296 GVFKKFNWRYLVIDEAHRIKNEKSKLS-EIVREFKTTNRLLLTGTPLQNNLHELWALLNF 354
                KK  WR  VIDEAHR+KN   KL    +  F+  +R+LLTGTPLQNN+ EL++LLNF
Sbjct:  1324 EFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNF 1383

Query:   355 LLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVY 414
             L P            F + +   D   +++L  +LKP +LRRLK +VEK L PK+E  + 
Sbjct:  1384 LHPQQFDNSATFLEQFGSCQ-TDDQ--VQKLQEILKPMMLRRLKEDVEKSLGPKEETIIE 1440

Query:   415 VGLSKMQREWYTKV 428
             V LS MQ+++Y  +
Sbjct:  1441 VQLSDMQKKFYRAI 1454

 Score = 134 (52.2 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 28/58 (48%), Positives = 39/58 (67%)

Query:    27 SPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGPKIDRFDY 84
             S  +  G  +R+YQ  G++W++  Y N  N ILADEMGLGKT+QTI+ L  +I  +DY
Sbjct:  1188 SKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLS-RI--YDY 1242


>UNIPROTKB|F5GWX5 [details] [associations]
            symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
            IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
            ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
            Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
            Bgee:F5GWX5 Uniprot:F5GWX5
        Length = 1905

 Score = 278 (102.9 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 896

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   897 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 951

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   952 KADVFKNMPSKTELIVRVELSPMQKKYY 979

 Score = 232 (86.7 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   703 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 762

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   763 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 811

 Score = 131 (51.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   703 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 758

 Score = 42 (19.8 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   108 KKKKKLGPKKEKKSKSKRKEEEE 130


>UNIPROTKB|E2RHA0 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
            Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
            Uniprot:E2RHA0
        Length = 1912

 Score = 278 (102.9 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   904 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 958

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   959 KADVFKNMPSKTELIVRVELSPMQKKYY 986

 Score = 232 (86.7 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   710 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 769

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   770 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 818

 Score = 131 (51.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   710 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 765

 Score = 42 (19.8 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   115 KKKKKLGPKKEKKSKSKRKEEEE 137

 Score = 40 (19.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELL-----ANANTEGKTIVSFENSPFYIKGGEMRDY 184
             L K+KK   P D +   +++++ E +L      +++ EG   V  E         E  DY
Sbjct:    51 LKKKKKPKKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDY 110

 Score = 40 (19.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 21/72 (29%), Positives = 32/72 (44%)

Query:   132 KEKKNVD--P---SDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQV 186
             +EK  VD  P    D   +  E+E+ E +L N  T  K + + E     IK   M +   
Sbjct:  1645 EEKSAVDLTPIVVEDKEEKKEEEEKKEVMLQNGETP-KDL-NDEKQKKNIKQRFMFNIAD 1702

Query:   187 RGLNWMISLYEN 198
              G   + SL++N
Sbjct:  1703 GGFTELHSLWQN 1714


>UNIPROTKB|Q14839 [details] [associations]
            symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0001103 "RNA polymerase II repressing
            transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
            Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
            HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
            EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
            RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
            PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
            PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
            IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
            DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
            Ensembl:ENST00000309577 Ensembl:ENST00000357008
            Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
            UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
            HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
            PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
            ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
            PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
            Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
        Length = 1912

 Score = 278 (102.9 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   904 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 958

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   959 KADVFKNMPSKTELIVRVELSPMQKKYY 986

 Score = 232 (86.7 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   710 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 769

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   770 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 818

 Score = 131 (51.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   710 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 765

 Score = 42 (19.8 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   115 KKKKKLGPKKEKKSKSKRKEEEE 137

 Score = 40 (19.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELL-----ANANTEGKTIVSFENSPFYIKGGEMRDY 184
             L K+KK   P D +   +++++ E +L      +++ EG   V  E         E  DY
Sbjct:    51 LKKKKKPKKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDY 110


>UNIPROTKB|F1SLR5 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
            RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
            GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
        Length = 1912

 Score = 278 (102.9 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   904 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 958

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   959 KADVFKNMPSKTELIVRVELSPMQKKYY 986

 Score = 232 (86.7 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   710 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 769

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   770 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 818

 Score = 131 (51.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   710 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 765

 Score = 42 (19.8 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   115 KKKKKLGPKKEKKSKSKRKEEEE 137

 Score = 39 (18.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELL-----ANANTEGKTIVSFENSPFYIKGGEMRDY 184
             L K+KK   P D +   +++++ E +L      +++ EG   V  E         E  DY
Sbjct:    51 LKKKKKPKKPRDPKIPKSKRQKKERVLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDY 110


>MGI|MGI:1344380 [details] [associations]
            symbol:Chd4 "chromodomain helicase DNA binding protein 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001103 "RNA polymerase II repressing
            transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
            "cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
            "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
            "protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
            GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
            ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
            UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
            DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
            PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
            KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
            Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
            GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
        Length = 1915

 Score = 278 (102.9 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 896

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   897 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 951

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   952 KADVFKNMPSKTELIVRVELSPMQKKYY 979

 Score = 232 (86.7 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   703 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 762

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   763 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 811

 Score = 131 (51.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   703 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 758

 Score = 42 (19.8 bits), Expect = 4.8e-42, Sum P(3) = 4.8e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   108 KKKKKLGPKKEKKSKSKRKEEEE 130


>UNIPROTKB|J9NW81 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
            Uniprot:J9NW81
        Length = 1932

 Score = 278 (102.9 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   864 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 923

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   924 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 978

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   979 KADVFKNMPSKTELIVRVELSPMQKKYY 1006

 Score = 232 (86.7 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   730 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 789

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   790 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 838

 Score = 131 (51.2 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   730 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 785

 Score = 42 (19.8 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   135 KKKKKLGPKKEKKSKSKRKEEEE 157

 Score = 40 (19.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELL-----ANANTEGKTIVSFENSPFYIKGGEMRDY 184
             L K+KK   P D +   +++++ E +L      +++ EG   V  E         E  DY
Sbjct:    71 LKKKKKPKKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDY 130

 Score = 40 (19.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
 Identities = 21/72 (29%), Positives = 32/72 (44%)

Query:   132 KEKKNVD--P---SDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQV 186
             +EK  VD  P    D   +  E+E+ E +L N  T  K + + E     IK   M +   
Sbjct:  1665 EEKSAVDLTPIVVEDKEEKKEEEEKKEVMLQNGETP-KDL-NDEKQKKNIKQRFMFNIAD 1722

Query:   187 RGLNWMISLYEN 198
              G   + SL++N
Sbjct:  1723 GGFTELHSLWQN 1734


>UNIPROTKB|F1N3F6 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
            Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
        Length = 1934

 Score = 278 (102.9 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
 Identities = 61/148 (41%), Positives = 89/148 (60%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE+   +  +    +W  L++DEAHR+KN +SK   ++  +   ++LLLTGT
Sbjct:   866 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 925

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEF--MGDHSIIERLHSVLKPFLLRRL 397
             PLQNNL EL+ LLNFL P               EEF  +     I++LH +L P +LRRL
Sbjct:   926 PLQNNLEELFHLLNFLTPERFHNLEGFL-----EEFADIAKEDQIKKLHDMLGPHMLRRL 980

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWY 425
             K++V K +  K EL V V LS MQ+++Y
Sbjct:   981 KADVFKNMPSKTELIVRVELSPMQKKYY 1008

 Score = 232 (86.7 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
 Identities = 46/110 (41%), Positives = 67/110 (60%)

Query:   167 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L  + 
Sbjct:   732 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 791

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRD 274
                +  GP +V  P ST++NW  EF+ W P +  +  +GD+D+R A+IR+
Sbjct:   792 KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSR-AIIRE 840

 Score = 131 (51.2 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query:    22 VSFENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             V +E  P Y+   GG +  YQ+ GLNW+   +  G + ILADEMGLGKT+QT   L
Sbjct:   732 VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL 787

 Score = 42 (19.8 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEE 154
             K+KK + P   +   ++++E+EE
Sbjct:   135 KKKKKLGPKKEKKSKSKRKEEEE 157

 Score = 42 (19.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query:   130 LTKEKKNVDPSDHRHRMTEQEEDEELL-----ANANTEGKTIVSFENSPFYIKGGEMRDY 184
             L K+KK   P D +   +++++ E LL      +++ EG   V  E         E  DY
Sbjct:    71 LKKKKKPKKPRDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDY 130


>TAIR|locus:2116747 [details] [associations]
            symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
            ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
            EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
            OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
        Length = 1202

 Score = 455 (165.2 bits), Expect = 7.9e-42, P = 7.9e-42
 Identities = 114/300 (38%), Positives = 165/300 (55%)

Query:   135 KNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMIS 194
             K+++ S  R +  E E + E       E K    F+ +P ++ G  +  YQ+ GLN++  
Sbjct:   190 KDINSSSRRDKYVENERNRE-------EFK---QFDLTPEFLTG-TLHTYQLEGLNFLRY 238

Query:   195 LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCP 254
              +    N ILADEMGLGKT+Q+I+ L  +    N++ PH+V+ P ST+ NW  EF  W P
Sbjct:   239 SWSKKTNVILADEMGLGKTIQSIAFLASLFE-ENLS-PHLVVAPLSTIRNWEREFATWAP 296

Query:   255 TLRAICLIGDQDARNAMIRDVMMPGE-----WDVCITSYEMCIRERGVFKKFNWRYLVID 309
              +  +   GD +AR+ +        E     +DV +T+YEM      V     W  ++ID
Sbjct:   297 HMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIID 356

Query:   310 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXW 369
             E HR+KN+KSKL   + +F + + +LLTGTPLQNNL+EL+AL++FL              
Sbjct:   357 EGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFL-DADKFGSLEKFQD 415

Query:   370 FNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEK-RLKPKKELKVYVGLSKMQREWYTKV 428
              N EE       I RLH +L P LLRRLK +V K ++ PKKEL + V +S  Q+E Y  V
Sbjct:   416 INKEEQ------ISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAV 469


>UNIPROTKB|Q96L91 [details] [associations]
            symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
            sapiens" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0035267
            "NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0043968
            "histone H2A acetylation" evidence=IDA] [GO:0043967 "histone H4
            acetylation" evidence=IDA] [GO:0016607 "nuclear speck"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
            GO:GO:0003677 GO:GO:0016607 GO:GO:0003682 SUPFAM:SSF46689
            GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 KO:K11320 EMBL:AY044869 EMBL:AC137590 EMBL:AC137632
            EMBL:AB040931 EMBL:AK096311 EMBL:BC037208 EMBL:BC064554
            EMBL:AB058721 EMBL:U80743 IPI:IPI00064931 IPI:IPI00167535
            IPI:IPI00783692 IPI:IPI00798339 IPI:IPI00878154 RefSeq:NP_056224.3
            UniGene:Hs.595201 ProteinModelPortal:Q96L91 DIP:DIP-29915N
            IntAct:Q96L91 MINT:MINT-1897496 STRING:Q96L91 PhosphoSite:Q96L91
            DMDM:209572748 PaxDb:Q96L91 PRIDE:Q96L91 DNASU:57634
            Ensembl:ENST00000330386 Ensembl:ENST00000332482
            Ensembl:ENST00000333577 Ensembl:ENST00000389561
            Ensembl:ENST00000389562 Ensembl:ENST00000537902
            Ensembl:ENST00000541296 GeneID:57634 KEGG:hsa:57634 UCSC:uc001ujm.3
            UCSC:uc001ujn.3 UCSC:uc021rgq.1 CTD:57634 GeneCards:GC12P132434
            H-InvDB:HIX0021564 HGNC:HGNC:11958 HPA:HPA016704 MIM:606265
            neXtProt:NX_Q96L91 PharmGKB:PA27808 HOVERGEN:HBG051488
            InParanoid:Q96L91 OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400
            GenomeRNAi:57634 NextBio:64345 ArrayExpress:Q96L91 Bgee:Q96L91
            CleanEx:HS_EP400 Genevestigator:Q96L91 GermOnline:ENSG00000183495
            Uniprot:Q96L91
        Length = 3159

 Score = 461 (167.3 bits), Expect = 7.9e-42, P = 7.9e-42
 Identities = 103/277 (37%), Positives = 144/277 (51%)

Query:   153 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 212
             E +L   +    T V F N+P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1065 EAILPKGSARVTTSVKF-NAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1122

Query:   213 TLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMI 272
             T+Q I+   ++       GPH+V+V    +L W  E K+WCP L+ +  IG      A  
Sbjct:  1123 TVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKR 1182

Query:   273 RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             ++   P  + VCITSY    R    F +  W+ LVIDE  R+K    +  E V   ++  
Sbjct:  1183 QEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQ 1242

Query:   333 RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKP 391
             RLLL  +PL N   ELW +++FL+P              +EE     H ++ RLH V +P
Sbjct:  1243 RLLLIDSPLHNTFLELWTMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQP 1302

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             F+LRR K +VEK+L  K E  +   LS  Q+  Y  V
Sbjct:  1303 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDV 1339

 Score = 144 (55.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 31/66 (46%), Positives = 41/66 (62%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E +L   +    T V F N+P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1065 EAILPKGSARVTTSVKF-NAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1122

Query:    68 TLQTIS 73
             T+Q I+
Sbjct:  1123 TVQIIA 1128


>UNIPROTKB|F1NAD2 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
            DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
            break processing" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
            "site of double-strand break" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
            "nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
            separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
            GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
            EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
            EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
            Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
        Length = 963

 Score = 451 (163.8 bits), Expect = 1.3e-41, P = 1.3e-41
 Identities = 98/258 (37%), Positives = 151/258 (58%)

Query:   180 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPK 239
             E++ YQ  GLNW+  L+++G+NGILADEMGLGKT+Q I+ L ++ +     GPH+++VP 
Sbjct:   432 ELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHI-YQEGDRGPHLIVVPA 490

Query:   240 STLLNWMNEFKKWCPTLRAICL-IGDQDARNAMIRDVM-MPGEWDVCITSYEMCIR---E 294
             STL NW+ E   WCP L  +   +G Q+ R  +  D+     +++V +T+Y   I    +
Sbjct:   491 STLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRADISNRVVDFNVIVTTYNCAISSSDD 550

Query:   295 RGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNF 354
             R +F+K    Y + DE H +KN  S   + +      +RLLLTGTP+QNNL EL +LLNF
Sbjct:   551 RSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRINAKHRLLLTGTPVQNNLLELMSLLNF 610

Query:   355 LLPXXXXXXXXXXX-WFNTEEFMGDHSII---ERL-HS--VLKPFLLRRLKSEVEKRLKP 407
             ++P             F+++    +       ER+ H+  ++KPF+LRR+K EV K+L P
Sbjct:   611 VMPHMFSSSTSEIRRMFSSKAKTAEEQSTYEKERIAHAKQIIKPFILRRVKDEVLKQLPP 670

Query:   408 KKELKVYVGLSKMQREWY 425
             KK+      +S+ Q + Y
Sbjct:   671 KKDHIELCAMSEKQEQLY 688

 Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 25/41 (60%), Positives = 34/41 (82%)

Query:    35 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E++ YQ  GLNW+  L+++G+NGILADEMGLGKT+Q I+ L
Sbjct:   432 ELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFL 472


>WB|WBGene00002637 [details] [associations]
            symbol:let-418 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0048557 "embryonic digestive tract
            morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
            factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
            evidence=ISS] [GO:0040027 "negative regulation of vulval
            development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
            RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
            SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
            GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
            OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
        Length = 1829

 Score = 276 (102.2 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
 Identities = 61/149 (40%), Positives = 86/149 (57%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE    ++ +     W  LV+DEAHR+KN +S   + + E+    R+LLTGT
Sbjct:   720 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT 779

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQNNL EL+ LLNFL              FN    +     IE+LH++L P +LRRLK+
Sbjct:   780 PLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE---ISKEDQIEKLHNLLGPHMLRRLKA 836

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             +V   +  K EL V V LS MQ++WY  +
Sbjct:   837 DVLTGMPSKSELIVRVELSAMQKKWYKNI 865

 Score = 235 (87.8 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
 Identities = 52/146 (35%), Positives = 82/146 (56%)

Query:   135 KNVDPSDHRHRMTE---QEEDEELLANANTEGKTI-VSFENSPFYIK--GGEMRDYQVRG 188
             KNV     +HR  +    +EDE+       E   I   +E  P Y+   GG++  YQ+ G
Sbjct:   552 KNVQKMIAKHREAKGLPPKEDEK--KKKKREKIDIRKKYEVQPDYVTETGGKLHPYQLEG 609

Query:   189 LNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNE 248
             LNW+   + NG + ILADEMGLGKT+Q+++ L  +    +  GP ++  P ST++NW  E
Sbjct:   610 LNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWERE 669

Query:   249 FKKWCPTLRAICLIGDQDARNAMIRD 274
              ++WCP    +  +G +DAR  ++R+
Sbjct:   670 AEQWCPDFYVVTYVGLRDAR-VVLRE 694

 Score = 140 (54.3 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 26/54 (48%), Positives = 38/54 (70%)

Query:    24 FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             +E  P Y+   GG++  YQ+ GLNW+   + NG + ILADEMGLGKT+Q+++ L
Sbjct:   588 YEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFL 641


>UNIPROTKB|G5EBZ4 [details] [associations]
            symbol:let-418 "Protein let-418" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
            RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
            SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
            GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
            OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
        Length = 1829

 Score = 276 (102.2 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
 Identities = 61/149 (40%), Positives = 86/149 (57%)

Query:   280 EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 339
             ++ V +TSYE    ++ +     W  LV+DEAHR+KN +S   + + E+    R+LLTGT
Sbjct:   720 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGT 779

Query:   340 PLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKS 399
             PLQNNL EL+ LLNFL              FN    +     IE+LH++L P +LRRLK+
Sbjct:   780 PLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE---ISKEDQIEKLHNLLGPHMLRRLKA 836

Query:   400 EVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             +V   +  K EL V V LS MQ++WY  +
Sbjct:   837 DVLTGMPSKSELIVRVELSAMQKKWYKNI 865

 Score = 235 (87.8 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
 Identities = 52/146 (35%), Positives = 82/146 (56%)

Query:   135 KNVDPSDHRHRMTE---QEEDEELLANANTEGKTI-VSFENSPFYIK--GGEMRDYQVRG 188
             KNV     +HR  +    +EDE+       E   I   +E  P Y+   GG++  YQ+ G
Sbjct:   552 KNVQKMIAKHREAKGLPPKEDEK--KKKKREKIDIRKKYEVQPDYVTETGGKLHPYQLEG 609

Query:   189 LNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNE 248
             LNW+   + NG + ILADEMGLGKT+Q+++ L  +    +  GP ++  P ST++NW  E
Sbjct:   610 LNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWERE 669

Query:   249 FKKWCPTLRAICLIGDQDARNAMIRD 274
              ++WCP    +  +G +DAR  ++R+
Sbjct:   670 AEQWCPDFYVVTYVGLRDAR-VVLRE 694

 Score = 140 (54.3 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
 Identities = 26/54 (48%), Positives = 38/54 (70%)

Query:    24 FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             +E  P Y+   GG++  YQ+ GLNW+   + NG + ILADEMGLGKT+Q+++ L
Sbjct:   588 YEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFL 641


>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
            symbol:chd8 "chromodomain helicase DNA binding
            protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
            signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
            ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
            UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
            Uniprot:B0R0I6
        Length = 2511

 Score = 453 (164.5 bits), Expect = 4.2e-41, P = 4.2e-41
 Identities = 102/271 (37%), Positives = 158/271 (58%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             + S  Y  G ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+LL  M     +
Sbjct:   836 DESTEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEM-FSAGV 894

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMM----------PG 279
               P ++I P ST+ NW  EF  W   + AI   G   +R  MI+   M          PG
Sbjct:   895 QSPFMIIAPLSTITNWEREFSNWTD-MNAIVYHGSLASRQ-MIQQYEMYCKDDKGHLIPG 952

Query:   280 --EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
               ++D  IT++EM + +    ++ +WR +VIDEAHR+KN   KL + ++  +  +++LLT
Sbjct:   953 AYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLT 1012

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQN + EL++LL+FL P            F     +     +++L S+LKP +LRRL
Sbjct:  1013 GTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD---LKTEEQVQKLQSILKPMMLRRL 1069

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             K +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1070 KEDVEKNLAPKQETIIEVELTDVQKKYYRAI 1100

 Score = 138 (53.6 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 26/51 (50%), Positives = 38/51 (74%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             + S  Y  G ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+LL
Sbjct:   836 DESTEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALL 886


>UNIPROTKB|B5DE69 [details] [associations]
            symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
            KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
            GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
            Uniprot:B5DE69
        Length = 2184

 Score = 445 (161.7 bits), Expect = 6.0e-41, Sum P(2) = 6.0e-41
 Identities = 99/270 (36%), Positives = 157/270 (58%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y  G ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  + +   I
Sbjct:   744 ELSREYQNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNV-GI 802

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPG- 279
              GP +VI P ST+ NW  EF  W   +  I   G   +R  +       +D    ++PG 
Sbjct:   803 RGPFLVIAPLSTITNWEREFGSWTQ-MNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGA 861

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++D  IT++EM + +    ++  WR ++IDEAHR+KN   KL + ++     +++LLTG
Sbjct:   862 YKFDALITTFEMVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTG 921

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:   922 TPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLK 978

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   979 EDVEKNLAPKQETIIEVELTNIQKKYYRAI 1008

 Score = 133 (51.9 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y  G ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   744 ELSREYQNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFL 794

 Score = 38 (18.4 bits), Expect = 6.0e-41, Sum P(2) = 6.0e-41
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K KK  +  D +  +T+ E+DEE+
Sbjct:   524 KRKKYTEDLDIK--ITDDEDDEEV 545


>UNIPROTKB|F1MLB1 [details] [associations]
            symbol:F1MLB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
            [GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
            "NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
            GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
            GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
            PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:DAAA02044957
            EMBL:DAAA02044956 IPI:IPI01018591 Ensembl:ENSBTAT00000027216
            Uniprot:F1MLB1
        Length = 3137

 Score = 452 (164.2 bits), Expect = 7.1e-41, P = 7.1e-41
 Identities = 100/277 (36%), Positives = 143/277 (51%)

Query:   153 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 212
             E +L   +    T V   N+P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1063 EAILPKGSARISTAVKL-NAPALLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1120

Query:   213 TLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMI 272
             T+Q I+   ++       GPH+VIV    +L W  E K+WCP L+ +  +G      A  
Sbjct:  1121 TVQIIAFFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKTLLYVGSHRELKAKR 1180

Query:   273 RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             ++   P  +++CITSY+   +    F +  W+ LVIDE  R+K    +  E V   ++  
Sbjct:  1181 QEWTEPNSFNICITSYKQFFKGFASFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQ 1240

Query:   333 RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKP 391
             RLLL   PL N   ELW +++FL+P               EE     H ++ RLH V +P
Sbjct:  1241 RLLLIDAPLHNTFLELWTMVHFLIPGISRPYLHFPLKAPNEENQDYYHKVVIRLHRVTQP 1300

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             F+LRR K +VEK+L  K E  +   LS  Q+  Y  V
Sbjct:  1301 FILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDV 1337

 Score = 139 (54.0 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 30/66 (45%), Positives = 40/66 (60%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E +L   +    T V   N+P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1063 EAILPKGSARISTAVKL-NAPALLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1120

Query:    68 TLQTIS 73
             T+Q I+
Sbjct:  1121 TVQIIA 1126


>UNIPROTKB|E2QUR1 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
            Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
        Length = 2200

 Score = 445 (161.7 bits), Expect = 7.8e-41, Sum P(2) = 7.8e-41
 Identities = 105/306 (34%), Positives = 165/306 (53%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD    R     Q    EL      +       E S  Y    ++R+YQ+ G+NW++
Sbjct:   381 KEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL 440

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
               + N  N ILADEMGLGKT+Q+I+ L  + +   I GP +VI P ST+ NW  EF  W 
Sbjct:   441 FNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLSTITNWEREFNTWT 499

Query:   254 PTLRAICLIGDQDARNAM---------IRDVMMPG--EWDVCITSYEMCIRERGVFKKFN 302
               +  I   G   +R  +          R  ++PG  ++D  IT++EM + +    ++  
Sbjct:   500 E-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 558

Query:   303 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXX 362
             WR ++IDEAHR+KN   KL + ++     +++LLTGTPLQN + EL++LL+FL P     
Sbjct:   559 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 618

Query:   363 XXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                    F     +     +++L ++LKP +LRRLK +VEK L PK+E  + V L+ +Q+
Sbjct:   619 ESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 675

Query:   423 EWYTKV 428
             ++Y  +
Sbjct:   676 KYYRAI 681

 Score = 125 (49.1 bits), Expect = 0.00056, P = 0.00056
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   417 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 467

 Score = 37 (18.1 bits), Expect = 7.8e-41, Sum P(2) = 7.8e-41
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K KK  +  D +  +T+ EE+EE+
Sbjct:   198 KRKKYTEDLDIK--ITDDEEEEEV 219


>MGI|MGI:1276124 [details] [associations]
            symbol:Ep400 "E1A binding protein p400" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IDA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
            evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
            [GO:0043968 "histone H2A acetylation" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 MGI:MGI:1276124 GO:GO:0005524 GO:GO:0003677
            GO:GO:0016607 GO:GO:0003682 GO:GO:0035267 GO:GO:0043968
            GO:GO:0043967 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 KO:K11320 CTD:57634 HOVERGEN:HBG051488
            OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400 EMBL:AB092694
            EMBL:AB092695 EMBL:AC161348 EMBL:AK006168 EMBL:AK030095
            EMBL:AK037693 EMBL:AK046892 EMBL:AK163566 EMBL:AK164049
            EMBL:AK122517 EMBL:BC022153 EMBL:BC085511 IPI:IPI00229659
            IPI:IPI00404291 IPI:IPI00480329 IPI:IPI00720144 IPI:IPI01008391
            RefSeq:NP_083613.2 RefSeq:NP_775089.1 UniGene:Mm.270487
            ProteinModelPortal:Q8CHI8 IntAct:Q8CHI8 STRING:Q8CHI8
            PhosphoSite:Q8CHI8 PaxDb:Q8CHI8 PRIDE:Q8CHI8
            Ensembl:ENSMUST00000041558 Ensembl:ENSMUST00000112435
            Ensembl:ENSMUST00000112436 GeneID:75560 KEGG:mmu:75560
            UCSC:uc008yrf.1 UCSC:uc008yrg.1 UCSC:uc008yrh.1 InParanoid:Q8CHI8
            Bgee:Q8CHI8 CleanEx:MM_EP400 Genevestigator:Q8CHI8
            GermOnline:ENSMUSG00000029505 Uniprot:Q8CHI8
        Length = 3072

 Score = 451 (163.8 bits), Expect = 8.8e-41, P = 8.8e-41
 Identities = 97/277 (35%), Positives = 145/277 (52%)

Query:   153 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 212
             E +L   +    T V F ++P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1064 EAILPKGSARVTTAVKF-SAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1121

Query:   213 TLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMI 272
             T+Q I+   ++       GPH+V++    +L W  E K+WCP L+ +  +G      A  
Sbjct:  1122 TVQIIAFFAHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKR 1181

Query:   273 RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             ++   P  + +CITSY+   R    F + +W+ LV+DE  R+K    +  E + + ++  
Sbjct:  1182 QEWTEPNNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQ 1241

Query:   333 RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKP 391
             RLLL   PL N   ELW +++FL+P               EE     H ++ RLH V +P
Sbjct:  1242 RLLLIDVPLHNTFLELWTMVHFLIPGISRPYLSFPLKAPNEENQDYYHKMVIRLHRVTQP 1301

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             F+LRR K +VEK+L  K E  +   LS  Q+  Y  V
Sbjct:  1302 FILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYEDV 1338

 Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 30/66 (45%), Positives = 41/66 (62%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E +L   +    T V F ++P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1064 EAILPKGSARVTTAVKF-SAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1121

Query:    68 TLQTIS 73
             T+Q I+
Sbjct:  1122 TVQIIA 1127


>DICTYBASE|DDB_G0293012 [details] [associations]
            symbol:DDB_G0293012 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
            SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
            RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
            EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
            InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
        Length = 3071

 Score = 440 (159.9 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
 Identities = 89/251 (35%), Positives = 146/251 (58%)

Query:   181 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKS 240
             ++++QV G  W+   + +  + +LADEMGLGKT+Q+I+ L Y+     I GP +V+ P S
Sbjct:   898 LKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVAPLS 957

Query:   241 TLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGE---WDVCITSYEMCIRERGV 297
             TL NW  E  KW   ++ +   G Q+ R  + +      +   ++V +T+YE  + +   
Sbjct:   958 TLGNWHKEILKWTK-MKTLVFYGSQETRGFISKYEFKHKDTYLFEVLLTTYETIMSDHSS 1016

Query:   298 FKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLP 357
             F +  WR L++DE HRIKN+KSK+   ++  KT + ++LTGTPLQN++ ELW +LNFL P
Sbjct:  1017 FVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTPLQNDMKELWTMLNFLDP 1076

Query:   358 XXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGL 417
                         ++    + + S + +LH +L P+LLRR+K +VE  +  K+E  + V L
Sbjct:  1077 DKFNSCQEFLDEYSD---LKEESQVSKLHQLLSPYLLRRMKEDVELSIPIKEETVIQVEL 1133

Query:   418 SKMQREWYTKV 428
             S  Q+ +Y  +
Sbjct:  1134 SSTQKTYYRAI 1144

 Score = 45 (20.9 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query:   134 KKNVDP--SDHRHRMTEQEEDEELLANANT 161
             K N++   S       E+EEDEE+ A++++
Sbjct:   311 KNNIESEESSEEEEEEEEEEDEEVQASSSS 340

 Score = 40 (19.1 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
 Identities = 7/14 (50%), Positives = 13/14 (92%)

Query:     3 EQEEDEELLANANT 16
             E+EEDEE+ A++++
Sbjct:   327 EEEEDEEVQASSSS 340

 Score = 40 (19.1 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
 Identities = 13/53 (24%), Positives = 24/53 (45%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDY 184
             K+ KN +  ++     E+EE+EE       E +  +  EN    IK  + + +
Sbjct:   199 KKLKNDNEGENEEDEEEEEEEEE--EEEEEEEEEDIYIENVRDVIKSDDDQSF 249

 Score = 37 (18.1 bits), Expect = 6.3e-40, Sum P(2) = 6.3e-40
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query:   129 SLTKEKKNVDPSDHRHRMTEQEEDEELLANANT 161
             +++K+ K +   D+  +  +   +EEL  N+N+
Sbjct:     2 TVSKKSKTIAKKDNNMKDDDTIMNEELNNNSNS 34


>UNIPROTKB|I3L7Y4 [details] [associations]
            symbol:EP400 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
            GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 EMBL:CU469318 EMBL:CU469455
            Ensembl:ENSSSCT00000027939 Uniprot:I3L7Y4
        Length = 2789

 Score = 450 (163.5 bits), Expect = 9.9e-41, P = 9.9e-41
 Identities = 95/251 (37%), Positives = 134/251 (53%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G +RDYQ  GL+W+  LY   +NGILADE GLGKT+Q I+   ++       GPH+VIV 
Sbjct:  1079 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVIVR 1138

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
                +L W  E K+WCP L+ +  +G      A  ++   P  +++CITSY+   R    F
Sbjct:  1139 SCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWSEPNSFNICITSYKQFFRGHASF 1198

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPX 358
              +  W+ LVIDE  R+K    +  E V   ++  RLLL   PL N   ELW +++FL+P 
Sbjct:  1199 PRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLIDAPLHNTFLELWTMVHFLIPG 1258

Query:   359 XXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGL 417
                          +EE     H ++ RLH V +PF+LRR K +VEK+L  K E  +   L
Sbjct:  1259 ISRPYLHFPLKAPSEENQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRL 1318

Query:   418 SKMQREWYTKV 428
             S  Q+  Y  V
Sbjct:  1319 SNRQKALYEDV 1329

 Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
 Identities = 24/40 (60%), Positives = 30/40 (75%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             G +RDYQ  GL+W+  LY   +NGILADE GLGKT+Q I+
Sbjct:  1079 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1118


>UNIPROTKB|I3LPX4 [details] [associations]
            symbol:EP400 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
            [GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
            "NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
            GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
            GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
            PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:CU469318
            EMBL:CU469455 Ensembl:ENSSSCT00000024610 Uniprot:I3LPX4
        Length = 2865

 Score = 450 (163.5 bits), Expect = 1.0e-40, P = 1.0e-40
 Identities = 95/251 (37%), Positives = 134/251 (53%)

Query:   179 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVP 238
             G +RDYQ  GL+W+  LY   +NGILADE GLGKT+Q I+   ++       GPH+VIV 
Sbjct:  1082 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVIVR 1141

Query:   239 KSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIRERGVF 298
                +L W  E K+WCP L+ +  +G      A  ++   P  +++CITSY+   R    F
Sbjct:  1142 SCNILKWELELKRWCPGLKTLLYVGSHRELKAKRQEWSEPNSFNICITSYKQFFRGHASF 1201

Query:   299 KKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPX 358
              +  W+ LVIDE  R+K    +  E V   ++  RLLL   PL N   ELW +++FL+P 
Sbjct:  1202 PRARWKCLVIDEMQRVKGMTERHWEAVFALQSQQRLLLIDAPLHNTFLELWTMVHFLIPG 1261

Query:   359 XXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGL 417
                          +EE     H ++ RLH V +PF+LRR K +VEK+L  K E  +   L
Sbjct:  1262 ISRPYLHFPLKAPSEENQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRL 1321

Query:   418 SKMQREWYTKV 428
             S  Q+  Y  V
Sbjct:  1322 SNRQKALYEDV 1332

 Score = 131 (51.2 bits), Expect = 0.00017, P = 0.00017
 Identities = 24/40 (60%), Positives = 30/40 (75%)

Query:    34 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 73
             G +RDYQ  GL+W+  LY   +NGILADE GLGKT+Q I+
Sbjct:  1082 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIA 1121


>RGD|1304733 [details] [associations]
            symbol:Ep400 "E1A binding protein p400" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0016607 "nuclear speck" evidence=ISO] [GO:0035267
            "NuA4 histone acetyltransferase complex" evidence=ISO] [GO:0043967
            "histone H4 acetylation" evidence=ISO] [GO:0043968 "histone H2A
            acetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
            Pfam:PF00176 SMART:SM00717 RGD:1304733 GO:GO:0005524 GO:GO:0003677
            GO:GO:0003682 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:AC095390 IPI:IPI00948258
            Ensembl:ENSRNOT00000066812 ArrayExpress:D3ZXH2 Uniprot:D3ZXH2
        Length = 2908

 Score = 450 (163.5 bits), Expect = 1.0e-40, P = 1.0e-40
 Identities = 97/277 (35%), Positives = 145/277 (52%)

Query:   153 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 212
             E +L   +    T V F ++P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1064 EAILPKGSARVTTAVKF-SAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1121

Query:   213 TLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMI 272
             T+Q I+   ++       GPH+V++    +L W  E K+WCP L+ +  +G      A  
Sbjct:  1122 TVQIIAFFAHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGTHRELKAKR 1181

Query:   273 RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             ++   P  + +CITSY+   R    F + +W+ LV+DE  R+K    +  E + + ++  
Sbjct:  1182 QEWTEPNNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQ 1241

Query:   333 RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGD-HSIIERLHSVLKP 391
             RLLL   PL N   ELW +++FL+P               EE     H ++ RLH V +P
Sbjct:  1242 RLLLIDVPLHNTFLELWTMVHFLIPGISRPYLSFPLKAPNEENQDYYHKMVIRLHRVTQP 1301

Query:   392 FLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             F+LRR K +VEK+L  K E  +   LS  Q+  Y  V
Sbjct:  1302 FILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYEDV 1338

 Score = 140 (54.3 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 30/66 (45%), Positives = 41/66 (62%)

Query:     8 EELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGK 67
             E +L   +    T V F ++P  + G  +RDYQ  GL+W+  LY   +NGILADE GLGK
Sbjct:  1064 EAILPKGSARVTTAVKF-SAPSLLYGA-LRDYQKIGLDWLAKLYRKNLNGILADEAGLGK 1121

Query:    68 TLQTIS 73
             T+Q I+
Sbjct:  1122 TVQIIA 1127


>UNIPROTKB|F1MLB2 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0045945 "positive regulation of transcription from RNA
            polymerase III promoter" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=IEA] [GO:0030178 "negative regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
            OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
            EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
            Uniprot:F1MLB2
        Length = 2537

 Score = 445 (161.7 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
 Identities = 105/306 (34%), Positives = 165/306 (53%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD    R     Q    EL      +       E S  Y    ++R+YQ+ G+NW++
Sbjct:   717 KEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL 776

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
               + N  N ILADEMGLGKT+Q+I+ L  + +   I GP +VI P ST+ NW  EF  W 
Sbjct:   777 FNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLSTITNWEREFNTWT 835

Query:   254 PTLRAICLIGDQDARNAM---------IRDVMMPG--EWDVCITSYEMCIRERGVFKKFN 302
               +  I   G   +R  +          R  ++PG  ++D  IT++EM + +    ++  
Sbjct:   836 E-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 894

Query:   303 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXX 362
             WR ++IDEAHR+KN   KL + ++     +++LLTGTPLQN + EL++LL+FL P     
Sbjct:   895 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 954

Query:   363 XXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                    F     +     +++L ++LKP +LRRLK +VEK L PK+E  + V L+ +Q+
Sbjct:   955 ESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 1011

Query:   423 EWYTKV 428
             ++Y  +
Sbjct:  1012 KYYRAI 1017

 Score = 125 (49.1 bits), Expect = 0.00066, P = 0.00066
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   753 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 803

 Score = 37 (18.1 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K KK  +  D +  +T+ EE+EE+
Sbjct:   534 KRKKYTEDLDIK--ITDDEEEEEV 555


>UNIPROTKB|F1S8J5 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0045945 "positive regulation of transcription from RNA
            polymerase III promoter" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=IEA] [GO:0030178 "negative regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
            OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
            ArrayExpress:F1S8J5 Uniprot:F1S8J5
        Length = 2569

 Score = 445 (161.7 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
 Identities = 105/306 (34%), Positives = 165/306 (53%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD    R     Q    EL      +       E S  Y    ++R+YQ+ G+NW++
Sbjct:   764 KEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL 823

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
               + N  N ILADEMGLGKT+Q+I+ L  + +   I GP +VI P ST+ NW  EF  W 
Sbjct:   824 FNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLSTITNWEREFNTWT 882

Query:   254 PTLRAICLIGDQDARNAM---------IRDVMMPG--EWDVCITSYEMCIRERGVFKKFN 302
               +  I   G   +R  +          R  ++PG  ++D  IT++EM + +    ++  
Sbjct:   883 E-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 941

Query:   303 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXX 362
             WR ++IDEAHR+KN   KL + ++     +++LLTGTPLQN + EL++LL+FL P     
Sbjct:   942 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1001

Query:   363 XXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                    F     +     +++L ++LKP +LRRLK +VEK L PK+E  + V L+ +Q+
Sbjct:  1002 ESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 1058

Query:   423 EWYTKV 428
             ++Y  +
Sbjct:  1059 KYYRAI 1064

 Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   800 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 850

 Score = 37 (18.1 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K KK  +  D +  +T+ EE+EE+
Sbjct:   581 KRKKYTEDLDIK--ITDDEEEEEV 602


>UNIPROTKB|E2QUS7 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
            Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
        Length = 2586

 Score = 445 (161.7 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
 Identities = 105/306 (34%), Positives = 165/306 (53%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD    R     Q    EL      +       E S  Y    ++R+YQ+ G+NW++
Sbjct:   764 KEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL 823

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
               + N  N ILADEMGLGKT+Q+I+ L  + +   I GP +VI P ST+ NW  EF  W 
Sbjct:   824 FNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLSTITNWEREFNTWT 882

Query:   254 PTLRAICLIGDQDARNAM---------IRDVMMPG--EWDVCITSYEMCIRERGVFKKFN 302
               +  I   G   +R  +          R  ++PG  ++D  IT++EM + +    ++  
Sbjct:   883 E-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 941

Query:   303 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXX 362
             WR ++IDEAHR+KN   KL + ++     +++LLTGTPLQN + EL++LL+FL P     
Sbjct:   942 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1001

Query:   363 XXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                    F     +     +++L ++LKP +LRRLK +VEK L PK+E  + V L+ +Q+
Sbjct:  1002 ESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 1058

Query:   423 EWYTKV 428
             ++Y  +
Sbjct:  1059 KYYRAI 1064

 Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   800 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 850

 Score = 37 (18.1 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query:   132 KEKKNVDPSDHRHRMTEQEEDEEL 155
             K KK  +  D +  +T+ EE+EE+
Sbjct:   581 KRKKYTEDLDIK--ITDDEEEEEV 602


>UNIPROTKB|E1BS47 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
            IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
            Uniprot:E1BS47
        Length = 1326

 Score = 442 (160.7 bits), Expect = 2.3e-40, P = 2.3e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   143 ESSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGI 201

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:   202 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 260

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:   261 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 320

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:   321 TPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 377

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   378 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 407

 Score = 130 (50.8 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   143 ESSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL 193


>POMBASE|SPBP35G2.10 [details] [associations]
            symbol:mit1 "SHREC complex subunit Mit1" species:4896
            "Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
            heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
            activity" evidence=IDA] [GO:0019787 "small conjugating protein
            ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
            heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
            evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
            [GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
            PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
            GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
            GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
            GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
            GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
            HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
            GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
            ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
            GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
            NextBio:20802445 Uniprot:Q9P793
        Length = 1418

 Score = 442 (160.7 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 100/271 (36%), Positives = 151/271 (55%)

Query:   165 TIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 224
             T + + + P +IKGG +  YQ++GLNW+   +      ILADEMGLGKT+Q IS +  + 
Sbjct:   540 TNLEWHSQPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVL- 598

Query:   225 HYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMMPGEWD-- 282
              YR+   P +VIVP +T+ NW  E KKW P L+   L+G +  R+ ++RD  +  + D  
Sbjct:   599 FYRHKCFPVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRS-LVRDYRLINQKDPK 657

Query:   283 -----VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT 337
                  V + S     RE  + +KF W+ L++DE  R+KN++S L   +   K+  +LLLT
Sbjct:   658 HVSTHVLVISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLT 717

Query:   338 GTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRL 397
             GTPLQNN+ EL+ LL FL P           +      +    + E LH +LKPF LRR+
Sbjct:   718 GTPLQNNVRELFNLLQFLNPMKINAAELEKRY----SIIDTEKVTE-LHQILKPFFLRRV 772

Query:   398 KSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             KSEV      K E+ + + ++ +Q+  Y  +
Sbjct:   773 KSEVLDNFPTKVEVIIPLSMTPVQKGLYKSI 803

 Score = 132 (51.5 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query:    20 TIVSFENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             T + + + P +IKGG +  YQ++GLNW+   +      ILADEMGLGKT+Q IS +
Sbjct:   540 TNLEWHSQPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFI 595


>UNIPROTKB|Q9HCK8 [details] [associations]
            symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
            species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
            domain binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IDA]
            [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
            "methylated histone residue binding" evidence=IDA] [GO:0045945
            "positive regulation of transcription from RNA polymerase III
            promoter" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
            [GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
            binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
            [GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
            unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
            GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
            GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
            GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
            EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
            EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
            EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
            IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
            RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
            PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
            STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
            PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
            Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
            UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
            HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
            KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
            NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
            Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
        Length = 2581

 Score = 445 (161.7 bits), Expect = 3.1e-40, P = 3.1e-40
 Identities = 105/306 (34%), Positives = 165/306 (53%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD    R     Q    EL      +       E S  Y    ++R+YQ+ G+NW++
Sbjct:   764 KEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLL 823

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
               + N  N ILADEMGLGKT+Q+I+ L  + +   I GP +VI P ST+ NW  EF  W 
Sbjct:   824 FNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLSTITNWEREFNTWT 882

Query:   254 PTLRAICLIGDQDARNAM---------IRDVMMPG--EWDVCITSYEMCIRERGVFKKFN 302
               +  I   G   +R  +          R  ++PG  ++D  IT++EM + +    ++  
Sbjct:   883 E-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 941

Query:   303 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXX 362
             WR ++IDEAHR+KN   KL + ++     +++LLTGTPLQN + EL++LL+FL P     
Sbjct:   942 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1001

Query:   363 XXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                    F     +     +++L ++LKP +LRRLK +VEK L PK+E  + V L+ +Q+
Sbjct:  1002 ESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 1058

Query:   423 EWYTKV 428
             ++Y  +
Sbjct:  1059 KYYRAI 1064

 Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   800 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 850


>RGD|620696 [details] [associations]
            symbol:Chd8 "chromodomain helicase DNA binding protein 8"
            species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
            evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
            [GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
            "negative regulation of Wnt receptor signaling pathway"
            evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
            [GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
            [GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO;ISS]
            [GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter" evidence=ISO;ISS]
            [GO:0060070 "canonical Wnt receptor signaling pathway"
            evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
            evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
            GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
            GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
            HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
            EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
            UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
            Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
            UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
        Length = 2581

 Score = 445 (161.7 bits), Expect = 3.1e-40, P = 3.1e-40
 Identities = 105/306 (34%), Positives = 165/306 (53%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD    R     Q    EL      +       E S  Y    ++R+YQ+ G+NW++
Sbjct:   764 KEDVDEGKIREFKRIQSRHPELKRVNRPQANAWKKLELSHEYKNRNQLREYQLEGVNWLL 823

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
               + N  N ILADEMGLGKT+Q+I+ L  + +   I GP +VI P ST+ NW  EF  W 
Sbjct:   824 FNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLSTITNWEREFNTWT 882

Query:   254 PTLRAICLIGDQDARNAM---------IRDVMMPG--EWDVCITSYEMCIRERGVFKKFN 302
               +  I   G   +R  +          R  ++PG  ++D  IT++EM + +    ++  
Sbjct:   883 E-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 941

Query:   303 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXX 362
             WR ++IDEAHR+KN   KL + ++     +++LLTGTPLQN + EL++LL+FL P     
Sbjct:   942 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1001

Query:   363 XXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                    F     +     +++L ++LKP +LRRLK +VEK L PK+E  + V L+ +Q+
Sbjct:  1002 ESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 1058

Query:   423 EWYTKV 428
             ++Y  +
Sbjct:  1059 KYYRAI 1064

 Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   800 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 850


>MGI|MGI:1915022 [details] [associations]
            symbol:Chd8 "chromodomain helicase DNA binding protein 8"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
            pathway" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
            evidence=ISO] [GO:0035064 "methylated histone residue binding"
            evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0045945 "positive regulation of transcription
            from RNA polymerase III promoter" evidence=ISO] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=ISO]
            [GO:0070016 "armadillo repeat domain binding" evidence=ISO]
            [GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
            GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
            HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
            HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
            OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
            IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
            UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
            IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
            PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
            UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
            NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
        Length = 2582

 Score = 445 (161.7 bits), Expect = 3.1e-40, P = 3.1e-40
 Identities = 105/306 (34%), Positives = 165/306 (53%)

Query:   134 KKNVDPSDHRHRMTEQEEDEELLANANTEGKTIVSFENSPFYIKGGEMRDYQVRGLNWMI 193
             K++VD    R     Q    EL      +       E S  Y    ++R+YQ+ G+NW++
Sbjct:   766 KEDVDEGKIREFKRIQSRHPELRRVNRPQANAWKKLELSHEYKNRNQLREYQLEGVNWLL 825

Query:   194 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWC 253
               + N  N ILADEMGLGKT+Q+I+ L  + +   I GP +VI P ST+ NW  EF  W 
Sbjct:   826 FNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLSTITNWEREFNTWT 884

Query:   254 PTLRAICLIGDQDARNAM---------IRDVMMPG--EWDVCITSYEMCIRERGVFKKFN 302
               +  I   G   +R  +          R  ++PG  ++D  IT++EM + +    ++  
Sbjct:   885 E-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIE 943

Query:   303 WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXX 362
             WR ++IDEAHR+KN   KL + ++     +++LLTGTPLQN + EL++LL+FL P     
Sbjct:   944 WRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPS 1003

Query:   363 XXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQR 422
                    F     +     +++L ++LKP +LRRLK +VEK L PK+E  + V L+ +Q+
Sbjct:  1004 ESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 1060

Query:   423 EWYTKV 428
             ++Y  +
Sbjct:  1061 KYYRAI 1066

 Score = 125 (49.1 bits), Expect = 0.00067, P = 0.00067
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   802 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 852


>ZFIN|ZDB-GENE-070912-179 [details] [associations]
            symbol:chd7 "chromodomain helicase DNA binding
            protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
            "retina development in camera-type eye" evidence=IMP] [GO:0021602
            "cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
            looping" evidence=IMP] [GO:0030282 "bone mineralization"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
            GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
            GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
            Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
            Uniprot:F1QGL1
        Length = 3140

 Score = 446 (162.1 bits), Expect = 3.1e-40, P = 3.1e-40
 Identities = 101/270 (37%), Positives = 155/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y     +R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:  1001 ESSREYKNANALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGI 1059

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPG- 279
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       RD    ++ G 
Sbjct:  1060 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRKTIQAYEMYYRDTQGRIIKGA 1118

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++   IT++EM + +    +   WR ++IDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1119 YKFHAVITTFEMILTDCPELRNVPWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTG 1178

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LLNFL P            F     +     +++L  +LKP +LRRLK
Sbjct:  1179 TPLQNTVEELFSLLNFLEPDRFPSESTFMQEFGD---LKTEEQVQKLQGILKPMMLRRLK 1235

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1236 EDVEKNLAPKEETIIEVELTNVQKKYYRAI 1265


>UNIPROTKB|H0YJG4 [details] [associations]
            symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
            HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
        Length = 873

 Score = 436 (158.5 bits), Expect = 3.9e-40, P = 3.9e-40
 Identities = 98/270 (36%), Positives = 155/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L  + +   I
Sbjct:    26 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GI 84

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM---------IRDVMMPG- 279
              GP +VI P ST+ NW  EF  W   +  I   G   +R  +          R  ++PG 
Sbjct:    85 HGPFLVIAPLSTITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGA 143

Query:   280 -EWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
              ++D  IT++EM + +    ++  WR ++IDEAHR+KN   KL + ++     +++LLTG
Sbjct:   144 YKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTG 203

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:   204 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD---LKTEEQVQKLQAILKPMMLRRLK 260

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   261 EDVEKNLAPKQETIIEVELTNIQKKYYRAI 290

 Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:    26 ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFL 76


>UNIPROTKB|F1NSG3 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
            nerve development" evidence=IEA] [GO:0030217 "T cell
            differentiation" evidence=IEA] [GO:0030540 "female genitalia
            development" evidence=IEA] [GO:0035116 "embryonic hindlimb
            morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=IEA] [GO:0043584 "nose
            development" evidence=IEA] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0060041 "retina development
            in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
            hormone secretion" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0007628 "adult
            walking behavior" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
            OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
            EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
            ArrayExpress:F1NSG3 Uniprot:F1NSG3
        Length = 2248

 Score = 442 (160.7 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   195 ESSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGI 253

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:   254 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 312

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:   313 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 372

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:   373 TPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 429

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:   430 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 459


>UNIPROTKB|H3BTW3 [details] [associations]
            symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
            EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
            Uniprot:H3BTW3
        Length = 1099

 Score = 437 (158.9 bits), Expect = 5.5e-40, P = 5.5e-40
 Identities = 99/270 (36%), Positives = 154/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L Y      I
Sbjct:   375 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 433

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP ++I P ST+ NW  EF+ W   +  +   G   +R  +       RD    ++ G 
Sbjct:   434 RGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 492

Query:   281 W--DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM +   G      WR ++IDEAHR+KN+  KL E ++     +++LLTG
Sbjct:   493 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTG 552

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:   553 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 609

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK+L PK+E  + V L+ +Q+++Y  +
Sbjct:   610 EDVEKKLAPKEETIIEVELTNIQKKYYRAI 639

 Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   375 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL 425


>TAIR|locus:2051678 [details] [associations]
            symbol:ETL1 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
            evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
            KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
            RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
            SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
            EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
            TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
            ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
            Uniprot:Q9ZUL5
        Length = 763

 Score = 432 (157.1 bits), Expect = 6.5e-40, P = 6.5e-40
 Identities = 100/261 (38%), Positives = 150/261 (57%)

Query:   181 MRDYQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPK 239
             ++ YQ+ G+N+++ LY+ GI G ILADEMGLGKT+Q I+ L  +    N  GPH+V+ P 
Sbjct:   213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272

Query:   240 STLLNWMNEFKKWCPTLRAICLIGDQDARNAMIRDVMM------PGEWDVCITSYEMCIR 293
             S L NW  E +KWCP+   +   G   AR A  R++        P  ++V +  Y +  R
Sbjct:   273 SVLENWERELRKWCPSFTVLQYHGA--ARAAYSRELNSLSKAGKPPPFNVLLVCYSLFER 330

Query:   294 -------ERGVFKKFNWRYLVIDEAHRIKNEKS-KLSEIVREFKTTN-RLLLTGTPLQNN 344
                    +R V K++ W  +++DEAH +K++ S +   ++   +  N RL+LTGTPLQN+
Sbjct:   331 HSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 390

Query:   345 LHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLKSEVEKR 404
             LHELW+LL F+LP                E   D  +I R+ S+L PF+LRRLKS+V ++
Sbjct:   391 LHELWSLLEFMLPDIFTTENVDLKKLLNAE---DTELITRMKSILGPFILRRLKSDVMQQ 447

Query:   405 LKPKKELKVYVGLSKMQREWY 425
             L PK +   YV + + Q + Y
Sbjct:   448 LVPKIQRVEYVLMERKQEDAY 468


>FB|FBgn0023395 [details] [associations]
            symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
            InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
            RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
            DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
            EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
            UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
            OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
            NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
        Length = 892

 Score = 434 (157.8 bits), Expect = 6.9e-40, P = 6.9e-40
 Identities = 99/276 (35%), Positives = 155/276 (56%)

Query:   169 FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 226
             +E+ P ++K  G ++  +Q+ G++W+   +  GI  ILADEMGLGKT+QT+  L  +   
Sbjct:   253 YEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKE 312

Query:   227 RNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM--------------I 272
              +  GP ++ VP STL NW  E + W P L  +  +G + AR  +              +
Sbjct:   313 GHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTM 372

Query:   273 RDVMMPGEWDVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN 332
             R+     +++V +TSYE    +       +W  LV+DEAHR+++ +SK   I+ +++   
Sbjct:   373 RENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGY 432

Query:   333 RLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPF 392
             +LLLTGTPLQNNL EL+ LLNFL              F T+  +     ++RLH +L+P 
Sbjct:   433 KLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEF-TD--VSKEEQVKRLHEILEPH 489

Query:   393 LLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
             +LRRLK++V K + PK E  V V LS MQ+++Y  +
Sbjct:   490 MLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI 525

 Score = 120 (47.3 bits), Expect = 0.00071, P = 0.00071
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query:    24 FENSPFYIK--GGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             +E+ P ++K  G ++  +Q+ G++W+   +  GI  ILADEMGLGKT+QT+  L
Sbjct:   253 YEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFL 306


>UNIPROTKB|E1BPM4 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
            "regulation of growth hormone secretion" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0050890 "cognition"
            evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
            [GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030540 "female genitalia development" evidence=IEA]
            [GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
            "cranial nerve development" evidence=IEA] [GO:0008015 "blood
            circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
            evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
            utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
            system development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
            GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
            GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
            EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
            Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
        Length = 2940

 Score = 442 (160.7 bits), Expect = 7.5e-40, P = 7.5e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   907 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGI 965

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:   966 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 1024

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1025 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 1084

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1085 TPLQNTVEELFSLLHFLEPTRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1141

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1142 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 1171


>RGD|1311921 [details] [associations]
            symbol:Chd7 "chromodomain helicase DNA binding protein 7"
            species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
            development" evidence=IEA;ISO] [GO:0001568 "blood vessel
            development" evidence=ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
            evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
            nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
            heart development" evidence=IEA;ISO] [GO:0007605 "sensory
            perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
            behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
            evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
            [GO:0021545 "cranial nerve development" evidence=IEA;ISO]
            [GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
            "female genitalia development" evidence=IEA;ISO] [GO:0035116
            "embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
            "positive regulation of multicellular organism growth"
            evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
            [GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
            "camera-type eye development" evidence=ISO] [GO:0043584 "nose
            development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
            development" evidence=ISO] [GO:0048844 "artery morphogenesis"
            evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
            [GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
            "retina development in camera-type eye" evidence=IEA;ISO]
            [GO:0060123 "regulation of growth hormone secretion"
            evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
            [GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
            GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
            GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
            GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
            GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
            GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
            CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
            RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
            GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
        Length = 2985

 Score = 442 (160.7 bits), Expect = 7.7e-40, P = 7.7e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   946 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGI 1004

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:  1005 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 1063

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1064 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 1123

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1124 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1180

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1181 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 1210


>MGI|MGI:2444748 [details] [associations]
            symbol:Chd7 "chromodomain helicase DNA binding protein 7"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
            [GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
            [GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
            nervous system development" evidence=ISO] [GO:0007512 "adult heart
            development" evidence=IMP] [GO:0007605 "sensory perception of
            sound" evidence=IMP] [GO:0007626 "locomotory behavior"
            evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
            [GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
            development" evidence=ISO] [GO:0030217 "T cell differentiation"
            evidence=ISO] [GO:0030540 "female genitalia development"
            evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IMP] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis"
            evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
            [GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
            "artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
            evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
            [GO:0060041 "retina development in camera-type eye" evidence=ISO]
            [GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
            [GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
            development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
            GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
            GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
            GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
            CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
            OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
            EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
            EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
            IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
            ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
            PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
            Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
            Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
            UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
            InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
            Genevestigator:A2AJK6 Uniprot:A2AJK6
        Length = 2986

 Score = 442 (160.7 bits), Expect = 7.7e-40, P = 7.7e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   947 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGI 1005

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:  1006 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 1064

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1065 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 1124

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1125 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1181

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1182 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 1211


>UNIPROTKB|F1RT88 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
            "regulation of growth hormone secretion" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0050890 "cognition"
            evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
            [GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030540 "female genitalia development" evidence=IEA]
            [GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
            "cranial nerve development" evidence=IEA] [GO:0008015 "blood
            circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
            evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
            utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
            system development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
            GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
            GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
            Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
        Length = 2991

 Score = 442 (160.7 bits), Expect = 7.7e-40, P = 7.7e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   950 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGI 1008

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:  1009 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 1067

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1068 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 1127

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1128 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1184

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1185 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 1214

 Score = 129 (50.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   950 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL 1000

 Score = 47 (21.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query:   170 ENSPFYIKGGEMRDYQ-VRGLNWMISLYENGINGILADEMGLGKTLQTI 217
             E +P   +GG  ++ +   G +   SL +   + +L DEM  G+ L ++
Sbjct:  2930 EKAPDKAEGGAFQEEENAEGSDAEESLDKTAESSVLEDEMAQGEELDSL 2978


>UNIPROTKB|F1PWD8 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
            EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
            GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
        Length = 2994

 Score = 442 (160.7 bits), Expect = 7.7e-40, P = 7.7e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   956 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGI 1014

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:  1015 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQSYEMYFKDPQGRVIKGS 1073

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1074 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 1133

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1134 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1190

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1191 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 1220


>UNIPROTKB|Q9P2D1 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0007628 "adult
            walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
            evidence=IEA] [GO:0030540 "female genitalia development"
            evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IEA] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
            development" evidence=IMP] [GO:0003007 "heart morphogenesis"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
            [GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
            development" evidence=IMP] [GO:0060021 "palate development"
            evidence=IMP] [GO:0060041 "retina development in camera-type eye"
            evidence=IMP] [GO:0001501 "skeletal system development"
            evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
            "central nervous system development" evidence=IMP] [GO:0021545
            "cranial nerve development" evidence=IMP] [GO:0060123 "regulation
            of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
            binding" evidence=TAS] [GO:0030217 "T cell differentiation"
            evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0060324 "face development" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
            GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
            GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
            GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
            GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
            GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
            KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
            EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
            EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
            EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
            UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
            PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
            SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
            PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
            Ensembl:ENST00000307121 Ensembl:ENST00000423902
            Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
            GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
            MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
            Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
            OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
            ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
            Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
            GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
        Length = 2997

 Score = 442 (160.7 bits), Expect = 7.7e-40, P = 7.7e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   957 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGI 1015

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:  1016 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 1074

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 1134

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1135 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1191

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1192 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 1221

 Score = 129 (50.5 bits), Expect = 0.00029, P = 0.00029
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   957 ESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL 1007


>UNIPROTKB|Q06A37 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
            RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
            SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
            HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
            NextBio:20823957 Uniprot:Q06A37
        Length = 3011

 Score = 442 (160.7 bits), Expect = 7.7e-40, P = 7.7e-40
 Identities = 100/270 (37%), Positives = 156/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y    ++R+YQ+ G+NW++  + N  N ILADEMGLGKT+Q+I+ L Y  + + I
Sbjct:   958 ESSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGI 1016

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP +VI P ST+ NW  EF+ W   L  +   G Q +R  +       +D    ++ G 
Sbjct:  1017 HGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGS 1075

Query:   281 WD--VCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM + +    +   WR +VIDEAHR+KN   KL E ++     +++LLTG
Sbjct:  1076 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTG 1135

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1136 TPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1192

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK L PK+E  + V L+ +Q+++Y  +
Sbjct:  1193 EDVEKNLAPKEETIIEVELTNIQKKYYRAI 1222


>RGD|1594200 [details] [associations]
            symbol:LOC680231 "similar to chromodomain helicase DNA binding
            protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
            Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
        Length = 2881

 Score = 441 (160.3 bits), Expect = 9.4e-40, P = 9.4e-40
 Identities = 100/270 (37%), Positives = 154/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L Y      I
Sbjct:   848 DQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEVLLTGI 906

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP ++I P ST+ NW  EF+ W   +  +   G   +R  +       RD    ++ G 
Sbjct:   907 RGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 965

Query:   281 W--DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM +   G      WR ++IDEAHR+KN+  KL E ++     +++LLTG
Sbjct:   966 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTG 1025

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1026 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1082

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEKRL PK+E  + V L+ +Q+++Y  +
Sbjct:  1083 EDVEKRLAPKEETIIEVELTNIQKKYYRAI 1112

 Score = 136 (52.9 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   848 DQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL 898


>MGI|MGI:1924001 [details] [associations]
            symbol:Chd9 "chromodomain helicase DNA binding protein 9"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
            MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
            HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
            KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
            EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
            IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
            ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
            PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
            Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
            KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
            OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
            CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
        Length = 2885

 Score = 441 (160.3 bits), Expect = 9.4e-40, P = 9.4e-40
 Identities = 100/270 (37%), Positives = 155/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L Y      I
Sbjct:   848 EQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 906

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP ++I P ST+ NW  EF+ W   +  +   G   +R  +       RD    ++ G 
Sbjct:   907 RGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 965

Query:   281 W--DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM +   G     +WR ++IDEAHR+KN+  KL E ++     +++LLTG
Sbjct:   966 YRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTG 1025

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1026 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1082

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK+L PK+E  + V L+ +Q+++Y  +
Sbjct:  1083 EDVEKKLAPKEETIIEVELTNIQKKYYRAI 1112

 Score = 139 (54.0 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 27/51 (52%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   848 EQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL 898


>SGD|S000000017 [details] [associations]
            symbol:FUN30 "Snf2p family member with ATP-dependent
            chromatin remodeling activity" species:4932 "Saccharomyces
            cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
            "heterochromatin maintenance involved in chromatin silencing"
            evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000729 "DNA double-strand break
            processing" evidence=IMP] [GO:0031934 "mating-type region
            heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
            [GO:0000775 "chromosome, centromeric region" evidence=IDA]
            [GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
            silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
            at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
            involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
            repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
            GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
            GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
            GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
            PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
            DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
            PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
            KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
            OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
            GO:GO:0070870 Uniprot:P31380
        Length = 1131

 Score = 432 (157.1 bits), Expect = 2.0e-39, P = 2.0e-39
 Identities = 107/309 (34%), Positives = 161/309 (52%)

Query:   138 DPSDHRHRMTEQEEDEELLANANTEG-KTIVSF-ENSPFYIKGG-EMRDYQVRGLNWMIS 194
             D  D         ++  +++  +  G K IV F +  P  +     ++DYQ  G+NW+  
Sbjct:   526 DDDDDDDEFVATRKNTHVISTTSRNGRKPIVKFFKGKPRLLSPEISLKDYQQTGINWLNL 585

Query:   195 LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCP 254
             LY+N ++ ILAD+MGLGKT Q IS   Y+K   N  GPH+V+VP STL NW+ EF+K+ P
Sbjct:   586 LYQNKMSCILADDMGLGKTCQVISFFAYLKQI-NEPGPHLVVVPSSTLENWLREFQKFAP 644

Query:   255 TLRAICLIGDQDARNAMIRDVMM--PGEWDVCITSYEMCIRER---GVFKKFNWRYLVID 309
              L+     G    R  + RD++    G++DV +T+Y +    +      K  N+  +V D
Sbjct:   645 ALKIEPYYGSLQEREEL-RDILERNAGKYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYD 703

Query:   310 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXW 369
             E H +KN  S+    + + +   RLLLTGTPLQNNL EL +LL F++P            
Sbjct:   704 EGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFIMPNLFISKKESFDA 763

Query:   370 F-----NTEEFMGDHS------IIERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLS 418
                    T +   +H+       I R  +++KPF+LRR K +V K L PK     Y  L+
Sbjct:   764 IFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELN 823

Query:   419 KMQREWYTK 427
              +Q++ Y K
Sbjct:   824 AIQKKIYDK 832

 Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
 Identities = 28/71 (39%), Positives = 44/71 (61%)

Query:     6 EDEELLANANTEG-KTIVSF-ENSPFYIKGG-EMRDYQVRGLNWMISLYENGINGILADE 62
             ++  +++  +  G K IV F +  P  +     ++DYQ  G+NW+  LY+N ++ ILAD+
Sbjct:   539 KNTHVISTTSRNGRKPIVKFFKGKPRLLSPEISLKDYQQTGINWLNLLYQNKMSCILADD 598

Query:    63 MGLGKTLQTIS 73
             MGLGKT Q IS
Sbjct:   599 MGLGKTCQVIS 609


>UNIPROTKB|Q3L8U1 [details] [associations]
            symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
            process" evidence=TAS] [GO:0044281 "small molecule metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
            GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
            EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
            EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
            IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
            UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
            IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
            PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
            Ensembl:ENST00000447540 Ensembl:ENST00000564845
            Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
            UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
            HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
            InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
            NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
            Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
        Length = 2897

 Score = 437 (158.9 bits), Expect = 2.5e-39, P = 2.5e-39
 Identities = 99/270 (36%), Positives = 154/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L Y      I
Sbjct:   849 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 907

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP ++I P ST+ NW  EF+ W   +  +   G   +R  +       RD    ++ G 
Sbjct:   908 RGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 966

Query:   281 W--DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM +   G      WR ++IDEAHR+KN+  KL E ++     +++LLTG
Sbjct:   967 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTG 1026

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1027 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1083

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK+L PK+E  + V L+ +Q+++Y  +
Sbjct:  1084 EDVEKKLAPKEETIIEVELTNIQKKYYRAI 1113

 Score = 136 (52.9 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   849 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL 899


>UNIPROTKB|E1BDZ3 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
            IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
        Length = 2900

 Score = 437 (158.9 bits), Expect = 2.5e-39, P = 2.5e-39
 Identities = 99/270 (36%), Positives = 154/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L Y      I
Sbjct:   850 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 908

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP ++I P ST+ NW  EF+ W   +  +   G   +R  +       RD    ++ G 
Sbjct:   909 RGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 967

Query:   281 W--DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM +   G      WR ++IDEAHR+KN+  KL E ++     +++LLTG
Sbjct:   968 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTG 1027

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1028 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1084

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK+L PK+E  + V L+ +Q+++Y  +
Sbjct:  1085 EDVEKKLAPKEETIIEVELTNIQKKYYRAI 1114


>UNIPROTKB|E2RDK8 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
            EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
            Uniprot:E2RDK8
        Length = 2902

 Score = 437 (158.9 bits), Expect = 2.5e-39, P = 2.5e-39
 Identities = 99/270 (36%), Positives = 154/270 (57%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L Y      I
Sbjct:   851 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLTGI 909

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP ++I P ST+ NW  EF+ W   +  +   G   +R  +       RD    ++ G 
Sbjct:   910 RGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGA 968

Query:   281 W--DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM +   G      WR ++IDEAHR+KN+  KL E ++     +++LLTG
Sbjct:   969 YRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTG 1028

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1029 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1085

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK+L PK+E  + V L+ +Q+++Y  +
Sbjct:  1086 EDVEKKLAPKEETIIEVELTNIQKKYYRAI 1115

 Score = 136 (52.9 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             + S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   851 DQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL 901


>UNIPROTKB|E1BS48 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
            EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
            EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
            IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
        Length = 2614

 Score = 436 (158.5 bits), Expect = 2.8e-39, P = 2.8e-39
 Identities = 100/270 (37%), Positives = 153/270 (56%)

Query:   170 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNI 229
             E+S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L Y      I
Sbjct:   846 EHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILLSGI 904

Query:   230 AGPHIVIVPKSTLLNWMNEFKKWCPTLRAICLIGDQDARNAM------IRDV---MMPGE 280
              GP ++I P ST+ NW  EF+ W   L  +   G   +R  +       RD    ++ G 
Sbjct:   905 RGPFLIIAPLSTITNWEREFRTWTD-LNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGT 963

Query:   281 W--DVCITSYEMCIRERGVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 338
             +     IT++EM +          WR ++IDEAHR+KN   KL E ++     +++LLTG
Sbjct:   964 YRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTG 1023

Query:   339 TPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFMGDHSIIERLHSVLKPFLLRRLK 398
             TPLQN + EL++LL+FL P            F     +     +++L ++LKP +LRRLK
Sbjct:  1024 TPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGD---LKTEEQVQKLQAILKPMMLRRLK 1080

Query:   399 SEVEKRLKPKKELKVYVGLSKMQREWYTKV 428
              +VEK+L PK+E  + V L+ +Q+++Y  +
Sbjct:  1081 EDVEKKLAPKEETIIEVELTNIQKKYYRAI 1110

 Score = 140 (54.3 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 27/51 (52%), Positives = 38/51 (74%)

Query:    25 ENSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 75
             E+S  Y  G ++R+YQ+ GLNW++  + N  N ILADEMGLGKT+Q+I+ L
Sbjct:   846 EHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL 896


>POMBASE|SPAC20G8.08c [details] [associations]
            symbol:fft1 "fun thirty related protein Fft1
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
            "nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
            GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
            ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
            GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
            NextBio:20803065 Uniprot:P87114
        Length = 944

 Score = 410 (149.4 bits), Expect = 5.3e-39, Sum P(2) = 5.3e-39
 Identities = 108/301 (35%), Positives = 158/301 (52%)

Query:   144 HRMTEQEEDEELLANANTEGKTIVSFE-NS--PFYIKGG-EMRDYQVRGLNWMISLYENG 199
             H + + ++ E+ L N +T G   +S+E NS  P  I  G  ++ YQ+ GLNW+  +Y+  
Sbjct:   377 HNLFDDKKMEQFL-NTST-GS--ISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAK 432

Query:   200 INGILADEMGLGKTLQTISLLGYMKHYRNIAGPHIVIVPKSTLLNWMNEFKKWCPTLRAI 259
             ++GILADEMGLGKT Q IS L  +K  + I   H+V+VP STL NW+ EF+K+CP+LR  
Sbjct:   433 LSGILADEMGLGKTCQVISFLASLKE-KGIQNRHLVVVPSSTLGNWLREFEKFCPSLRVE 491

Query:   260 CLIGDQDARNAMIRDVMMPGEWDVCITSYEMCIR---ERGVFKKFNWRYLVIDEAHRIKN 316
                G Q  R    R  +M  ++DV +T+Y++      +R   +K  +   + DE H +KN
Sbjct:   492 SYSGTQSERINK-RYYLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKN 550

Query:   317 EKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPXXXXXXXXXXXWFNTEEFM 376
               S+  + +       RLL+TGTPLQNNL EL +LL F+LP                +  
Sbjct:   551 RMSERYKHLMNIPANFRLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYKIKTT 610

Query:   377 GDHSI---------IERLHSVLKPFLLRRLKSEVEKRLKPKKELKVYVGLSKMQREWYTK 427
              D  I         I R  +++ PF+LRR K  V   L PK +   Y  + + Q   Y  
Sbjct:   611 SDGDIERAYLSQERISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLS 670

Query:   428 V 428
             V
Sbjct:   671 V 671

 Score = 138 (53.6 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 34/74 (45%), Positives = 48/74 (64%)

Query:     6 EDEELLANANTEGKTIVSFE-NS--PFYIKGG-EMRDYQVRGLNWMISLYENGINGILAD 61
             +D+++    NT   +I S+E NS  P  I  G  ++ YQ+ GLNW+  +Y+  ++GILAD
Sbjct:   381 DDKKMEQFLNTSTGSI-SYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILAD 439

Query:    62 EMGLGKTLQTISLL 75
             EMGLGKT Q IS L
Sbjct:   440 EMGLGKTCQVISFL 453

 Score = 43 (20.2 bits), Expect = 5.3e-39, Sum P(2) = 5.3e-39
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query:    22 VSFENS-PFYIKGGEMRDYQVRGLNWM 47
             VS E+S P  ++  EM +Y VR LN++
Sbjct:   255 VSIESSGPSEVED-EMSEYDVRVLNFL 280

WARNING:  HSPs involving 291 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      429       391   0.00094  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  541
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  266 KB (2138 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.55u 0.07s 31.62t   Elapsed:  00:00:03
  Total cpu time:  31.63u 0.07s 31.70t   Elapsed:  00:00:03
  Start:  Thu Aug 15 11:51:46 2013   End:  Thu Aug 15 11:51:49 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with Iswi Iswi Iswi Imitation SWI	protein from Drosophila melanogaster	1.1e-135
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Gallus gallus	2.1e-128
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Gallus gallus	2.1e-128
BLAST match view associations BLAST with Smarca5 Smarca5 Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	protein from Mus musculus	3.0e-127
BLAST match view associations BLAST with smarca5 smarca5 smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	gene_product from Danio rerio	3.8e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Bos taurus	6.3e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Canis lupus familiaris	6.3e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	protein from Homo sapiens	6.3e-127
BLAST match view associations BLAST with SMARCA5 SMARCA5 SMARCA5 Uncharacterized protein	protein from Sus scrofa	6.3e-127
BLAST match view associations BLAST with Smarca5 Smarca5 Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	gene from Rattus norvegicus	6.3e-127
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Gallus gallus	1.8e-126
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	5.0e-125
BLAST match view associations BLAST with si:dkey-148b12.1 si:dkey-148b12.1 si:dkey-148b12.1	gene_product from Danio rerio	1.3e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Probable global transcription activator SNF2L1	protein from Homo sapiens	2.1e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Probable global transcription activator SNF2L1	protein from Homo sapiens	2.1e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Sus scrofa	2.7e-123
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Bos taurus	7.2e-123
BLAST match view associations BLAST with Smarca1 Smarca1 Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	protein from Mus musculus	7.2e-123
BLAST match view associations BLAST with Smarca1 Smarca1 Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	gene from Rattus norvegicus	2.4e-122
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	8.3e-122
BLAST match view associations BLAST with isw-1 isw-1 isw-1	gene from Caenorhabditis elegans	2.6e-109
BLAST match view associations BLAST with SMARCA1 SMARCA1 SMARCA1 Uncharacterized protein	protein from Canis lupus familiaris	2.0e-96
BLAST match view associations BLAST with isw isw isw CHR group protein	gene from Dictyostelium discoideum	3.0e-91
BLAST match view associations BLAST with CHR17 CHR17 CHR17 chromatin remodeling factor17	protein from Arabidopsis thaliana	1.2e-87
BLAST match view associations BLAST with ISW2 ISW2 ISW2 ATP-dependent DNA translocase involved in chromatin remodeling	gene from Saccharomyces cerevisiae	3.3e-86
BLAST match view associations BLAST with MGG_01012 MGG_01012 MGG_01012 ISWI chromatin-remodeling complex ATPase ISW2	protein from Magnaporthe oryzae 70-15	4.3e-86
BLAST match view associations BLAST with ISW1 ISW1 ISW1 ATPase subunit of imitation-switch (ISWI) class chromatin remodelers	gene from Saccharomyces cerevisiae	7.2e-86
BLAST match view associations BLAST with ISW2 ISW2 ISW2	gene_product from Candida albicans	2.6e-79
BLAST match view associations BLAST with ISW2 ISW2 ISW2 ISWI chromatin-remodeling complex ATPase ISW2	protein from Candida albicans SC5314	2.6e-79
BLAST match view associations BLAST with PF11_0053 PF11_0053 PF11_0053 PfSNF2L	gene from Plasmodium falciparum	1.4e-66
BLAST match view associations BLAST with PF11_0053 PF11_0053 PF11_0053 PfSNF2L	protein from Plasmodium falciparum 3D7	1.4e-66
BLAST match view associations BLAST with SNF2 SNF2 SNF2 Catalytic subunit of the SWI/SNF chromatin remodeling complex	gene from Saccharomyces cerevisiae	1.7e-61
BLAST match view associations BLAST with orf19.1720 orf19.1720 orf19.1720	gene_product from Candida albicans	1.6e-60
BLAST match view associations BLAST with CaO19.1720 CaO19.1720 CaO19.1720 Putative uncharacterized protein	protein from Candida albicans SC5314	1.6e-60
BLAST match view associations BLAST with STH1 STH1 STH1 ATPase component of the RSC chromatin remodeling complex	gene from Saccharomyces cerevisiae	3.2e-60
BLAST match view associations BLAST with LOC100359912 LOC100359912 LOC100359912 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like	gene from Rattus norvegicus	5.0e-60
BLAST match view associations BLAST with snf2b snf2b snf2b SNF2-related protein Snf2a	gene from Dictyostelium discoideum	7.9e-60
BLAST match view associations BLAST with Srcap Srcap Srcap Snf2-related CREBBP activator protein	protein from Mus musculus	3.2e-59
BLAST match view associations BLAST with orf19.239 orf19.239 orf19.239	gene_product from Candida albicans	3.2e-59
BLAST match view associations BLAST with Smarca2 Smarca2 Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein from Mus musculus	1.0e-58
BLAST match view associations BLAST with smarca2 smarca2 smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	gene_product from Danio rerio	1.0e-58
BLAST match view associations BLAST with PFB0730w PFB0730w PFB0730w DNA helicase, putative	gene from Plasmodium falciparum	1.4e-58
BLAST match view associations BLAST with PFB0730w PFB0730w PFB0730w DEAD/DEAH box helicase, putative	protein from Plasmodium falciparum 3D7	1.4e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 SMARCA2 protein	protein from Bos taurus	1.5e-58
BLAST match view associations BLAST with F1SJG5 F1SJG5 F1SJG5 Uncharacterized protein	protein from Sus scrofa	1.5e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 Probable global transcription activator SNF2L2	protein from Homo sapiens	1.7e-58
BLAST match view associations BLAST with CHR23 CHR23 CHR23 AT5G19310	protein from Arabidopsis thaliana	2.0e-58
BLAST match view associations BLAST with E1C2F7 E1C2F7 E1C2F7 Uncharacterized protein	protein from Gallus gallus	2.9e-58
BLAST match view associations BLAST with ssl-1 ssl-1 ssl-1	gene from Caenorhabditis elegans	3.0e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 Uncharacterized protein	protein from Canis lupus familiaris	3.1e-58
BLAST match view associations BLAST with SMARCA2 SMARCA2 SMARCA2 Uncharacterized protein	protein from Canis lupus familiaris	3.3e-58
BLAST match view associations BLAST with hells hells hells helicase, lymphoid-specific	gene_product from Danio rerio	3.8e-58
BLAST match view associations BLAST with CHR1 CHR1 CHR1 AT5G66750	protein from Arabidopsis thaliana	6.6e-58
BLAST match view associations BLAST with LOC100622433 LOC100622433 LOC100622433 Uncharacterized protein	protein from Sus scrofa	6.8e-58
BLAST match view associations BLAST with smarca4 smarca4 smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	gene_product from Danio rerio	1.4e-57
BLAST match view associations BLAST with LOC100622433 LOC100622433 LOC100622433 Uncharacterized protein	protein from Sus scrofa	2.1e-57
BLAST match view associations BLAST with brm brm brm brahma	protein from Drosophila melanogaster	2.2e-57
BLAST match view associations BLAST with SNF2 SNF2 SNF2	gene_product from Candida albicans	3.1e-57
BLAST match view associations BLAST with SNF2 SNF2 SNF2 Putative uncharacterized protein SNF2	protein from Candida albicans SC5314	3.1e-57
BLAST match view associations BLAST with swsn-4 swsn-4 swsn-4	gene from Caenorhabditis elegans	8.0e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Transcription activator BRG1	protein from Bos taurus	9.6e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Transcription activator BRG1	protein from Bos taurus	9.6e-57
BLAST match view associations BLAST with Smarca4 Smarca4 Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	protein from Mus musculus	9.7e-57
BLAST match view associations BLAST with Smarca4 Smarca4 Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	gene from Rattus norvegicus	9.7e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Uncharacterized protein	protein from Canis lupus familiaris	9.7e-57
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 Transcription activator BRG1	protein from Homo sapiens	1.0e-56
BLAST match view associations BLAST with C52B9.8 C52B9.8 C52B9.8	gene from Caenorhabditis elegans	1.0e-56
BLAST match view associations BLAST with SMARCA4 SMARCA4 SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_c	protein from Homo sapiens	1.0e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Sus scrofa	1.6e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	1.7e-56
BLAST match view associations BLAST with HELLS HELLS HELLS Lymphoid-specific helicase	protein from Homo sapiens	1.7e-56
BLAST match view associations BLAST with LOC788113 LOC788113 LOC788113 Uncharacterized protein	protein from Bos taurus	2.5e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	3.0e-56
BLAST match view associations BLAST with SRCAP SRCAP SRCAP Uncharacterized protein	protein from Canis lupus familiaris	3.0e-56
BLAST match view associations BLAST with snf2a snf2a snf2a SNF2-related protein SNF2a	gene from Dictyostelium discoideum	5.4e-56
BLAST match view associations BLAST with PIE1 PIE1 PIE1 AT3G12810	protein from Arabidopsis thaliana	6.5e-56
BLAST match view associations BLAST with SWR1 SWR1 SWR1 Swi2/Snf2-related ATPase that is the structural component of the SWR1	gene from Saccharomyces cerevisiae	6.8e-56
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 ATP-dependent helicase, putative	gene from Plasmodium falciparum	1.1e-55
BLAST match view associations BLAST with PF08_0048 PF08_0048 PF08_0048 Probable ATP-dependent helicase PF08_0048	protein from Plasmodium falciparum 3D7	1.1e-55
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Sus scrofa	1.2e-55
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Bos taurus	1.2e-55
BLAST match view associations BLAST with dom dom dom domino	protein from Drosophila melanogaster	1.3e-55
BLAST match view associations BLAST with orf19.1871 orf19.1871 orf19.1871	gene_product from Candida albicans	1.3e-55
BLAST match view associations BLAST with Smarca2 Smarca2 Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	gene from Rattus norvegicus	1.3e-55
BLAST match view associations BLAST with HELLS HELLS HELLS Uncharacterized protein	protein from Canis lupus familiaris	2.0e-55
BLAST match view associations BLAST with IRC5 IRC5 IRC5 Putative ATPase containing the DEAD/H helicase-related sequence motif	gene from Saccharomyces cerevisiae	2.6e-55