BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10684
(288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 312 bits (799), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 141/177 (79%), Positives = 159/177 (89%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
VL+KDIDVVNGAGK+EKMRLQNILMQLRKC+NHPYLFDGAEPGPPYTTD HLV+NSGKM
Sbjct: 375 VLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMA 434
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LDKLLPKL+ Q SRVLIFSQMTRMLDILEDYC+WR + YCRLDGQT HEDR RQI +FN
Sbjct: 435 ILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFN 494
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
M+ S F+FMLSTRAGGLGINLATADVV++YDSDWNPQMDLQAM R +I ++ ++
Sbjct: 495 MDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVR 551
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 61/69 (88%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y YCRLDGQT HEDR RQI +FNM+ S F+FMLSTRAGGLGINLATADVV++YDSDWNP
Sbjct: 472 YNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNP 531
Query: 274 QMDLQAMVR 282
QMDLQAM R
Sbjct: 532 QMDLQAMDR 540
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 9/84 (10%)
Query: 145 TADVVVLYDSD-WNPQMDLQAMVR--------EAKILRRGSIKKALEAKMSRYRAPFHQL 195
T + V+ Y++ W +LQ + R E KI RR SIKKAL+ KMSRYRAPFHQL
Sbjct: 831 TPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALDQKMSRYRAPFHQL 890
Query: 196 RIAYGANKGKNYTEEEDRYLYCRL 219
R+ YG NKGKNYTE EDR+L C L
Sbjct: 891 RLQYGNNKGKNYTEIEDRFLVCML 914
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 153/177 (86%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct: 427 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 486
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ IN +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 546
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
S F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R +I + +++
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVR 603
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 58/69 (84%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y YCRLDGQT H++RQ IN +N S F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct: 524 YEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 583
Query: 274 QMDLQAMVR 282
Q+DLQAM R
Sbjct: 584 QVDLQAMDR 592
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct: 908 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 959
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 289 bits (739), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 153/177 (86%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct: 426 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 485
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ IN +N
Sbjct: 486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
S F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R +I + +++
Sbjct: 546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVR 602
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 58/69 (84%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y YCRLDGQT H++RQ IN +N S F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct: 523 YEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 582
Query: 274 QMDLQAMVR 282
Q+DLQAM R
Sbjct: 583 QVDLQAMDR 591
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct: 907 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 958
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 284 bits (727), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 152/177 (85%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LMKDIDV+N +GK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct: 434 ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMV 493
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
LDKLL ++K Q SRVLIFSQMTR+LDILEDYC WRG++Y RLDGQT HE+R+ I+ FN
Sbjct: 494 ALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN 553
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
S FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R +I ++ ++
Sbjct: 554 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVR 610
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 57/70 (81%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y RLDGQT HE+R+ I+ FN S FIFMLSTRAGGLGINLA+ADVV+LYDSDWNP
Sbjct: 531 YEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNP 590
Query: 274 QMDLQAMVRT 283
Q+DLQAM R
Sbjct: 591 QVDLQAMDRA 600
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L
Sbjct: 915 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICML 966
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 283 bits (723), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/189 (71%), Positives = 155/189 (82%), Gaps = 12/189 (6%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LMKDIDV+N +GK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct: 430 ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 489
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR-------- 113
VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R
Sbjct: 490 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVE 549
Query: 114 ---QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
QR+ I FN S FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R
Sbjct: 550 FLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 609
Query: 170 KILRRGSIK 178
+I ++ ++
Sbjct: 610 RIGQKKPVR 618
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 59/82 (71%), Gaps = 12/82 (14%)
Query: 214 YLYCRLDGQTAHEDR-----------QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATA 261
Y YCRLDGQT HE+R QR+ I FN S FIFMLSTRAGGLGINLA+A
Sbjct: 527 YEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASA 586
Query: 262 DVVVLYDSDWNPQMDLQAMVRT 283
DVV+LYDSDWNPQ+DLQAM R
Sbjct: 587 DVVILYDSDWNPQVDLQAMDRA 608
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L
Sbjct: 923 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICML 974
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 278 bits (711), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 127/177 (71%), Positives = 147/177 (83%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
VLMKDID++NGAGK+EK RL NILM LRKC NHPYLFDGAEPGPP+TTD+HLV NSGKMV
Sbjct: 379 VLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNSGKMV 438
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
VLDKLL K K Q SRVLIFSQ +RMLD+LED+C+WR ++YCRLDG T HEDR I +N
Sbjct: 439 VLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYN 498
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
S FIFML+TRAGGLGINLATADVV++YDSDWNPQ DLQAM R +I ++ ++
Sbjct: 499 APDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVR 555
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 54/70 (77%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y YCRLDG T HEDR I +N S FIFML+TRAGGLGINLATADVV++YDSDWNP
Sbjct: 476 YEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNP 535
Query: 274 QMDLQAMVRT 283
Q DLQAM R
Sbjct: 536 QSDLQAMDRA 545
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 44/50 (88%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYC 217
EA+I R+ ++KKAL+AK+++Y+APF QLRI+YG NKGK YTEEEDR+L C
Sbjct: 864 EARIQRKYAVKKALDAKIAKYKAPFQQLRISYGTNKGKTYTEEEDRFLVC 913
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 149/178 (83%), Gaps = 2/178 (1%)
Query: 2 VLMKDIDVVNGA-GKLE-KMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
+L KDID VNGA GK E K RL NI+MQLRKC NHPYLF+GAEPGPPYTTDEHL+FNSGK
Sbjct: 432 LLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGK 491
Query: 60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
M++LDKLL +LK + SRVLIFSQM+R+LDILEDYCY+R F+YCR+DG T+HE+R I++
Sbjct: 492 MIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDE 551
Query: 120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
+N S+ F+F+L+TRAGGLGINL TAD V+L+DSDWNPQ DLQAM R +I ++ +
Sbjct: 552 YNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQV 609
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 56/69 (81%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+ YCR+DG T+HE+R I+++N S+ F+F+L+TRAGGLGINL TAD V+L+DSDWNP
Sbjct: 531 FEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNP 590
Query: 274 QMDLQAMVR 282
Q DLQAM R
Sbjct: 591 QADLQAMDR 599
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/179 (68%), Positives = 147/179 (82%), Gaps = 2/179 (1%)
Query: 2 VLMKDIDVVNGA--GKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
+L KD+D VNG+ K K RL NI+MQLRKC NHPYLFDGAEPGPPYTTDEHLV+N+ K
Sbjct: 444 ILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAK 503
Query: 60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
+ VLDKLL KLK + SRVLIFSQM+R+LDILEDYCY+R ++YCR+DG TAHEDR + I+D
Sbjct: 504 LQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDD 563
Query: 120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
+N S F+F+L+TRAGGLGINL +ADVVVLYDSDWNPQ DLQAM R +I ++ +K
Sbjct: 564 YNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVK 622
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 57/69 (82%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y YCR+DG TAHEDR + I+D+N S F+F+L+TRAGGLGINL +ADVVVLYDSDWNP
Sbjct: 543 YEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNP 602
Query: 274 QMDLQAMVR 282
Q DLQAM R
Sbjct: 603 QADLQAMDR 611
Score = 38.5 bits (88), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAY--GANKGKNYTEEEDRYL 215
E KI R ++AL K+S Y+ PF L++ + +N + Y+EEEDR++
Sbjct: 951 EEKIKRVKMQQEALRRKLSEYKNPFFDLKLKHPPSSNNKRTYSEEEDRFI 1000
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 143/177 (80%), Gaps = 2/177 (1%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+L KD++V+N G E+ RL NI MQLRKC NHPYLF GAEPGPPYTT EHLV N+GKMV
Sbjct: 478 LLQKDLEVINAGG--ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMV 535
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LDKLLPKLK ++SRVLIFSQMTR+LDILEDY +RG++YCR+DG T EDR I FN
Sbjct: 536 LLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN 595
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
GS+ F+F+LSTRAGGLGINLATADVVVLYDSDWNPQ DLQA R +I ++ ++
Sbjct: 596 KPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQ 652
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 54/70 (77%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y YCR+DG T EDR I FN GS+ F+F+LSTRAGGLGINLATADVVVLYDSDWNP
Sbjct: 573 YQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNP 632
Query: 274 QMDLQAMVRT 283
Q DLQA R
Sbjct: 633 QADLQAQDRA 642
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYC 217
EA+I R+ I +A+ K+ RY+ P+ +L+I YG NKGK Y EE DR++ C
Sbjct: 945 EARISRKDEIMRAIGKKLDRYKNPWLELKIQYGQNKGKFYNEECDRFMLC 994
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 142/177 (80%), Gaps = 2/177 (1%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+L KD++ VN G E+ RL NI MQLRKC NHPYLF GAEPGPPYTT +HL+ N+GKMV
Sbjct: 436 LLQKDLEAVNAGG--ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMV 493
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LDKLLPKLK ++SRVLIFSQMTR+LDILEDY +RG+ YCR+DG T ++R I +N
Sbjct: 494 LLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN 553
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
GS+ F+F+LSTRAGGLGINLATADVV+LYDSDWNPQ+DLQA R +I ++ ++
Sbjct: 554 KPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQ 610
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 56/70 (80%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
YLYCR+DG T ++R I +N GS+ F+F+LSTRAGGLGINLATADVV+LYDSDWNP
Sbjct: 531 YLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNP 590
Query: 274 QMDLQAMVRT 283
Q+DLQA R
Sbjct: 591 QVDLQAQDRA 600
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYC 217
EA+I R+ I KA+ K+ RYR P+ +L+I YG NKGK Y EE DR++ C
Sbjct: 907 EARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMIC 956
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 181 bits (458), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 123/177 (69%), Gaps = 4/177 (2%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LMKD+D +K++LQN+L QLRKC +HPYLFDG EP P+ +HL+ SGK+
Sbjct: 295 ILMKDLDAFENE-TAKKVKLQNVLSQLRKCVDHPYLFDGVEP-EPFEIGDHLIEASGKLH 352
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LDKLL L ++ RVL+FSQMT+MLDIL+DY +RG+ Y R+DG E+R I +F
Sbjct: 353 LLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFG 412
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
+ IF F+LSTRAGG+G+NL AD V+ +DSD+NPQ DLQA R +I + S+K
Sbjct: 413 QQ--PIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVK 467
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y R+DG E+R I +F + IF F+LSTRAGG+G+NL AD V+ +DSD+NP
Sbjct: 390 YSYERVDGSVRGEERHLAIKNFGQQ--PIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNP 447
Query: 274 QMDLQAMVRT 283
Q DLQA R
Sbjct: 448 QNDLQAAARA 457
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 180 bits (457), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 140/227 (61%), Gaps = 17/227 (7%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
+L ++ D +N +M L N+LM+L+KC NHPYLF AE P + L+ N
Sbjct: 865 ILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKN 924
Query: 57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
SGK V+L K+L KLK RVLIFSQMTRMLDI+ED C + G++Y R+DG + RQ
Sbjct: 925 SGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDA 984
Query: 117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
I+ +N G+ FIF+LSTRAGGLGINLATAD V++YDSDWNP D+QA R ++ ++
Sbjct: 985 IDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1044
Query: 177 I-------KKALEAKMS---RYRAPFHQL--RIAYGANKGKNYTEEE 211
+ KK++E K++ + + + L R G +GK ++ E
Sbjct: 1045 VMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE 1091
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y R+DG + RQ I+ +N G+ FIF+LSTRAGGLGINLATAD V++YDSDWNP
Sbjct: 967 YRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNP 1026
Query: 274 QMDLQAMVRT 283
D+QA R
Sbjct: 1027 HNDIQAFSRA 1036
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 121/177 (68%), Gaps = 4/177 (2%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LMKD+D +K++LQNIL QLRKC +HPYLFDG EP P+ +HL SGK+
Sbjct: 293 ILMKDLDAFENE-TAKKVKLQNILSQLRKCVDHPYLFDGVEP-EPFEVGDHLTEASGKLH 350
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LDKLL L + RVL+FSQMT+MLDIL+DY +RG+ Y R+DG E+R I +F
Sbjct: 351 LLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG 410
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
+ IF+F+LSTRAGG+G+NL AD V+ DSD+NPQ DLQA R +I + S+K
Sbjct: 411 QQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 465
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y R+DG E+R I +F + IF+F+LSTRAGG+G+NL AD V+ DSD+NP
Sbjct: 388 YSYERVDGSVRGEERHLAIKNFGQQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNP 445
Query: 274 QMDLQAMVRT 283
Q DLQA R
Sbjct: 446 QNDLQAAARA 455
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 121/177 (68%), Gaps = 4/177 (2%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LMKD+D +K++LQNIL QLRKC +HPYLFDG EP P+ EHL+ SGK+
Sbjct: 287 ILMKDLDAFENE-TAKKVKLQNILTQLRKCVDHPYLFDGVEP-EPFEVGEHLIEASGKLH 344
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LD+LL L + RVL+FSQMT MLDIL+DY +RG+ Y R+DG E+R I +F
Sbjct: 345 LLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG 404
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
+ IF+F+LSTRAGG+G+NL AD V+ DSD+NPQ DLQA R +I + S+K
Sbjct: 405 NQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 459
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y R+DG E+R I +F + IF+F+LSTRAGG+G+NL AD V+ DSD+NP
Sbjct: 382 YSYERVDGSVRGEERHLAIKNFGNQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNP 439
Query: 274 QMDLQAMVRT 283
Q DLQA R
Sbjct: 440 QNDLQAAARA 449
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 178 bits (452), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 115/157 (73%), Gaps = 7/157 (4%)
Query: 19 MRLQNILMQLRKCSNHPYLFDGAEPGPPYT----TDEHLVFNSGKMVVLDKLLPKLKAQE 74
++LQNI+M LRKC NHPYL + P P T DE LV NSGK ++LD++LP+LK +
Sbjct: 558 LKLQNIMMLLRKCCNHPYLIEY--PIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRG 615
Query: 75 SRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLST 134
+VL+FSQMT MLDIL DYC+ R F + RLDG ++ +R++ ++ FN + ++FIF++ST
Sbjct: 616 HKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTD-PEVFIFLVST 674
Query: 135 RAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
RAGGLGINL AD V++YDSDWNPQ DLQA R +I
Sbjct: 675 RAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRI 711
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
+ RLDG ++ +R++ ++ FN + ++FIF++STRAGGLGINL AD V++YDSDWNPQ
Sbjct: 642 FSRLDGSMSYSEREKNMHSFNTD-PEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQS 700
Query: 276 DLQAMVR 282
DLQA R
Sbjct: 701 DLQAQDR 707
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 119/170 (70%), Gaps = 10/170 (5%)
Query: 9 VVNGAGKLEK---MRLQNILMQLRKCSNHPYLFDGAEPGPPYT----TDEHLVFNSGKMV 61
VV G +E ++L+NI+M LRKC NHPY+ + P P T DE LV NSGK +
Sbjct: 528 VVEGNIPIESEVNLKLRNIMMLLRKCCNHPYMIEY--PIDPVTQEFKIDEELVTNSGKFL 585
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LD++LP+LK + +VL+FSQMT MLDIL DYC+ R F + RLDG ++ +R++ I FN
Sbjct: 586 ILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFN 645
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
+ D+F+F++STRAGGLGINL AD V++YDSDWNPQ DLQA R +I
Sbjct: 646 TD-PDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRI 694
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+++ RLDG ++ +R++ I FN + D+F+F++STRAGGLGINL AD V++YDSDWNP
Sbjct: 623 FIFSRLDGSMSYSEREKNIYSFNTD-PDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNP 681
Query: 274 QMDLQAMVR 282
Q DLQA R
Sbjct: 682 QSDLQAQDR 690
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 119/177 (67%), Gaps = 4/177 (2%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
+LM+D+D + K RL N+LMQLRKC +HPYLFDG EP P+ EHLV SGK+
Sbjct: 282 ILMRDLDAFR-TDQSTKTRLLNVLMQLRKCVDHPYLFDGVEP-EPFEMGEHLVEASGKLS 339
Query: 62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
+LD +L L+ VL+FSQMTRMLDIL+DY +RG+ Y RLDG E+R I +F+
Sbjct: 340 LLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFS 399
Query: 122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
+ D+FIF+LST+AGG+G+NL AD V+ D D+NPQ DLQA R +I + +K
Sbjct: 400 TK--DVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVK 454
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y RLDG E+R I +F+ + D+FIF+LST+AGG+G+NL AD V+ D D+NP
Sbjct: 377 YSYERLDGSVRGEERNLAIKNFSTK--DVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNP 434
Query: 274 QMDLQAMVRT 283
Q DLQA R
Sbjct: 435 QNDLQAAARA 444
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 136/227 (59%), Gaps = 17/227 (7%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
+L ++ D +N +M L NI+M+L+KC NHPYLF A P + L+ N
Sbjct: 879 ILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKN 938
Query: 57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
+GK V+L K+L KLK RVLIFSQMT MLDILED+C G+KY R+DG + RQ
Sbjct: 939 AGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDA 998
Query: 117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI----- 171
I+ +N G+ F+F+LSTRAGGLGINLATAD V++YDSDWNP D+QA R ++
Sbjct: 999 IDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1058
Query: 172 ------LRRGSIKKALEAKMSRYRAPFH-QLRIAYGANKGKNYTEEE 211
+ +GS+++ + + + H +R GA GK+ ++ E
Sbjct: 1059 VMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE 1105
Score = 90.9 bits (224), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 50/70 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y R+DG + RQ I+ +N G+ F+F+LSTRAGGLGINLATAD V++YDSDWNP
Sbjct: 981 YKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNP 1040
Query: 274 QMDLQAMVRT 283
D+QA R
Sbjct: 1041 HNDIQAFSRA 1050
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 134/231 (58%), Gaps = 20/231 (8%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP------GPPYTTDEH--- 52
+L K+ + K L NI+ +L+K SNHPYLFD AE G T E+
Sbjct: 629 ILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLR 688
Query: 53 -LVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHE 111
L+ +SGKMV+LD+LL +LK RVLIFSQM RMLDIL DY +G + RLDG
Sbjct: 689 GLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSA 748
Query: 112 DRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
R+ I+ FN S+ F+F+LSTRAGGLGINL TAD VV++DSDWNPQ DLQAM R +I
Sbjct: 749 QRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRI 808
Query: 172 LRRGSI-------KKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEED 212
++ + K +E ++ +R + I+ G G YT++ +
Sbjct: 809 GQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNE 859
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%)
Query: 216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
+ RLDG R+ I+ FN S+ F+F+LSTRAGGLGINL TAD VV++DSDWNPQ
Sbjct: 738 FQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQA 797
Query: 276 DLQAMVR 282
DLQAM R
Sbjct: 798 DLQAMAR 804
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 109/166 (65%), Gaps = 9/166 (5%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEH---------LVFNSGKMVVLDKLLPKLK 71
L NI+++L+K SNHPYLFDG E + L+ NSGKMV+LDKLL +L+
Sbjct: 644 LLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLR 703
Query: 72 AQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFM 131
RVLIFSQM RMLDIL DY RG+ + RLDG R+ I+ FN S F+F+
Sbjct: 704 RDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFL 763
Query: 132 LSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
LSTRAGGLGINL TAD V+++DSDWNPQ DLQAM R +I ++ +
Sbjct: 764 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 809
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y + RLDG R+ I+ FN S F+F+LSTRAGGLGINL TAD V+++DSDWNP
Sbjct: 731 YPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNP 790
Query: 274 QMDLQAMVR 282
Q DLQAM R
Sbjct: 791 QADLQAMAR 799
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 116/176 (65%), Gaps = 5/176 (2%)
Query: 1 MVLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVF 55
+L ++ + +N G ++ L NI+M L+KC NHPYLF A P + LV
Sbjct: 962 FILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVK 1021
Query: 56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
+SGK+++L K+L KL+ + RVLIFSQMT+MLD+LED+ + G+KY R+DG RQ
Sbjct: 1022 SSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQE 1081
Query: 116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
I+ FN G+ F F+LSTRAGGLGINLATAD V++YDSDWNP D+QA R +I
Sbjct: 1082 AIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI 1137
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%)
Query: 210 EEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
E + Y Y R+DG RQ I+ FN G+ F F+LSTRAGGLGINLATAD V++YDS
Sbjct: 1061 EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDS 1120
Query: 270 DWNPQMDLQAMVRT 283
DWNP D+QA R
Sbjct: 1121 DWNPHNDIQAFSRA 1134
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 117/175 (66%), Gaps = 5/175 (2%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDE--HLVFN 56
+L ++ + +N G ++ L NI+M L+KC NHPYLF A P P E L+ +
Sbjct: 999 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKS 1058
Query: 57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
SGK+++L K+L KLK Q RVLIFSQMT+MLD+LED+ + G+KY R+DG RQ
Sbjct: 1059 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1118
Query: 117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
I+ FN G+ F F+LSTRAGGLGINLATAD V+++DSDWNP D+QA R +I
Sbjct: 1119 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1173
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 48/70 (68%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y R+DG RQ I+ FN G+ F F+LSTRAGGLGINLATAD V+++DSDWNP
Sbjct: 1101 YKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNP 1160
Query: 274 QMDLQAMVRT 283
D+QA R
Sbjct: 1161 HNDIQAFSRA 1170
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 116/175 (66%), Gaps = 10/175 (5%)
Query: 10 VNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP----GPPYTTDEHL---VFNSGKMVV 62
+G G+L L NI+++L+K SNHPYLF GA G T ++ L + NSGKMV+
Sbjct: 652 TDGRGQLS---LLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVL 708
Query: 63 LDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNM 122
LDKLL +LK RVLIFSQM RML+IL +Y RG+ Y RLDG R+ I+ FN
Sbjct: 709 LDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNA 768
Query: 123 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
S F+F+LSTRAGGLGINL TAD V+++DSDWNPQ DLQAM R +I ++ +
Sbjct: 769 PDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 823
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y Y RLDG R+ I+ FN S F+F+LSTRAGGLGINL TAD V+++DSDWNP
Sbjct: 745 YNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNP 804
Query: 274 QMDLQAMVR 282
Q DLQAM R
Sbjct: 805 QADLQAMAR 813
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 140/255 (54%), Gaps = 32/255 (12%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN------------SGKMVVLDKLLP 68
L N +MQLRK NHPY+F E + EHL F SGK +LD++LP
Sbjct: 1035 LMNTIMQLRKICNHPYMFQHIE----ESFSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1090
Query: 69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
KL+A +VL+F QMT ++ I+EDY +RGFKY RLDG T EDR + FN GS+ F
Sbjct: 1091 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1150
Query: 129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR--------EAKILRRGSIKKA 180
IF+LSTRAGGLG+NL +AD V+++DSDWNP DLQA R E ++LR ++ +
Sbjct: 1151 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV-NS 1209
Query: 181 LEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQINDFNM 237
+E K+ ++Y+ Q I G K+ + E +L L+ HE++ +
Sbjct: 1210 VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILE----HEEQDESRHCSTG 1265
Query: 238 EGSDIFIFMLSTRAG 252
GS F AG
Sbjct: 1266 SGSASFAHTAPPPAG 1280
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+ Y RLDG T EDR + FN GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct: 1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180
Query: 274 QMDLQAMVRT 283
DLQA R
Sbjct: 1181 HQDLQAQDRA 1190
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 168 bits (425), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN-------SGKMVVLDKLLPKLKAQ 73
L N ++QLRK NHP++F E T H V + SGK +LD++LPKLKA
Sbjct: 1054 LMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKAT 1113
Query: 74 ESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLS 133
RVL+F QMT+ + I+EDY WR F Y RLDG T EDR + FN +GSD+F+F+LS
Sbjct: 1114 NHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLS 1173
Query: 134 TRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
TRAGGLG+NL TAD VV++DSDWNP DLQA R +I +R ++
Sbjct: 1174 TRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVR 1218
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
++ Y RLDG T EDR + FN +GSD+F+F+LSTRAGGLG+NL TAD VV++DSDWN
Sbjct: 1138 QFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWN 1197
Query: 273 PQMDLQAMVR 282
P DLQA R
Sbjct: 1198 PHQDLQAQDR 1207
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 109/170 (64%), Gaps = 16/170 (9%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN------------SGKMVVLDKLLP 68
L N +MQLRK NHPY+F E + EHL F SGK +LD++LP
Sbjct: 1027 LMNTIMQLRKICNHPYMFQHIE----ESFSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1082
Query: 69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
KL+A +VL+F QMT ++ I+EDY +RGFKY RLDG T EDR + FN GS+ F
Sbjct: 1083 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1142
Query: 129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
IF+LSTRAGGLG+NL +AD V+++DSDWNP DLQA R +I ++ ++
Sbjct: 1143 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1192
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+ Y RLDG T EDR + FN GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct: 1113 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1172
Query: 274 QMDLQAMVRT 283
DLQA R
Sbjct: 1173 HQDLQAQDRA 1182
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 109/170 (64%), Gaps = 16/170 (9%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN------------SGKMVVLDKLLP 68
L N +MQLRK NHPY+F E + EHL F SGK +LD++LP
Sbjct: 1035 LMNTIMQLRKICNHPYMFQHIE----ESFSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1090
Query: 69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
KL+A +VL+F QMT ++ I+EDY +RGFKY RLDG T EDR + FN GS+ F
Sbjct: 1091 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1150
Query: 129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
IF+LSTRAGGLG+NL +AD V+++DSDWNP DLQA R +I ++ ++
Sbjct: 1151 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+ Y RLDG T EDR + FN GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct: 1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180
Query: 274 QMDLQAMVRT 283
DLQA R
Sbjct: 1181 HQDLQAQDRA 1190
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 109/170 (64%), Gaps = 16/170 (9%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN------------SGKMVVLDKLLP 68
L N +MQLRK NHPY+F E + EHL F SGK +LD++LP
Sbjct: 1035 LMNTIMQLRKICNHPYMFQHIE----ESFSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1090
Query: 69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
KL+A +VL+F QMT ++ I+EDY +RGFKY RLDG T EDR + FN GS+ F
Sbjct: 1091 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1150
Query: 129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
IF+LSTRAGGLG+NL +AD V+++DSDWNP DLQA R +I ++ ++
Sbjct: 1151 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1200
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+ Y RLDG T EDR + FN GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct: 1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180
Query: 274 QMDLQAMVRT 283
DLQA R
Sbjct: 1181 HQDLQAQDRA 1190
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 132/228 (57%), Gaps = 18/228 (7%)
Query: 1 MVLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNS--- 57
+L K+ + +N L NI+M L+KC NHPYLF A NS
Sbjct: 990 FILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTK 1049
Query: 58 --GKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
GK+V+L K+L +LKAQ RVLIFSQMT+MLDILED+ +KY R+DG RQ
Sbjct: 1050 AAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQE 1109
Query: 116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI---- 171
I+ FN G+ F+F+LSTRAGGLGINLATAD V++YDSDWNP D+QA R +I
Sbjct: 1110 AIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQAN 1169
Query: 172 -------LRRGSIKKALEAKMSRYRAPFHQLRIAYG-ANKGKNYTEEE 211
+ R S+++ + ++++ + L + G KG N+T++E
Sbjct: 1170 KVMIYRFVTRNSVEERV-TQVAKRKMMLTHLVVRPGMGGKGANFTKQE 1216
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 210 EEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
E ++Y Y R+DG RQ I+ FN G+ F+F+LSTRAGGLGINLATAD V++YDS
Sbjct: 1089 EGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDS 1148
Query: 270 DWNPQMDLQAMVRT 283
DWNP D+QA R
Sbjct: 1149 DWNPHNDIQAFSRA 1162
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 113/182 (62%), Gaps = 12/182 (6%)
Query: 9 VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------------PPYTTDEHLVFN 56
+ GA + L N +M+LRKC NHPYL GAE PP + +V +
Sbjct: 1016 LTKGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRS 1075
Query: 57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
SGK+V++DKLLPKL+A +VLIFSQM R LDILEDY R + Y R+DG+ RQ
Sbjct: 1076 SGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAA 1135
Query: 117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + +
Sbjct: 1136 IDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA 1195
Query: 177 IK 178
+K
Sbjct: 1196 VK 1197
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
P +QAMVR + L ++ + + RA H++ I + + E+ + RY
Sbjct: 1065 PDFHVQAMVRSSGKL------VLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRY 1118
Query: 215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
LY R+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ
Sbjct: 1119 LYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1178
Query: 275 MDLQAMVR 282
DLQA R
Sbjct: 1179 NDLQAQAR 1186
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 120/190 (63%), Gaps = 13/190 (6%)
Query: 2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDE 51
+L K+ ++ GAG+ L N +M+LRKC NHPYL GAE P +D
Sbjct: 1113 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDF 1172
Query: 52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
HL + ++GK+V++DKLLPK+KA +VLIFSQM R LDILEDY + + Y R+DG+
Sbjct: 1173 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1232
Query: 109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R
Sbjct: 1233 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1292
Query: 169 AKILRRGSIK 178
+I + ++K
Sbjct: 1293 HRIGQNKAVK 1302
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 49/70 (70%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
RYLY R+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWN
Sbjct: 1222 RYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1281
Query: 273 PQMDLQAMVR 282
PQ DLQA R
Sbjct: 1282 PQNDLQAQAR 1291
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 120/190 (63%), Gaps = 13/190 (6%)
Query: 2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDE 51
+L K+ ++ GAG+ L N +M+LRKC NHPYL GAE P +D
Sbjct: 1112 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDF 1171
Query: 52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
HL + ++GK+V++DKLLPK+KA +VLIFSQM R LDILEDY + + Y R+DG+
Sbjct: 1172 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1231
Query: 109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R
Sbjct: 1232 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1291
Query: 169 AKILRRGSIK 178
+I + ++K
Sbjct: 1292 HRIGQNKAVK 1301
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 49/70 (70%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
RYLY R+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWN
Sbjct: 1221 RYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1280
Query: 273 PQMDLQAMVR 282
PQ DLQA R
Sbjct: 1281 PQNDLQAQAR 1290
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 164 bits (414), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 132/207 (63%), Gaps = 16/207 (7%)
Query: 18 KMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD--EHLVFNSGKMVVLDKLLPKLKAQES 75
++ L NI+M+LRK HPY+ +G EP + + L+ + GK+ +LDK++ KLK Q
Sbjct: 553 QISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGH 612
Query: 76 RVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTR 135
RVLI++Q MLD+LEDYC + ++Y R+DG+ +RQ +I+ FN + S+ F F+LSTR
Sbjct: 613 RVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTR 672
Query: 136 AGGLGINLATADVVVLYDSDWNPQMDLQAMVREA-----------KILRRGSIKKALEAK 184
AGGLGINLATAD V++YDSDWNP DLQAM R +++ RG+I++ + +
Sbjct: 673 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERM-MQ 731
Query: 185 MSRYRAPFHQLRIAYGANKGKNYTEEE 211
+++ + L + G K +N +EE
Sbjct: 732 LTKKKMVLEHLVV--GKLKTQNINQEE 756
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
++ Y R+DG+ +RQ +I+ FN + S+ F F+LSTRAGGLGINLATAD V++YDSDWN
Sbjct: 635 KWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWN 694
Query: 273 PQMDLQAMVRT 283
P DLQAM R
Sbjct: 695 PHADLQAMARA 705
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 111/179 (62%), Gaps = 12/179 (6%)
Query: 12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------------PPYTTDEHLVFNSGK 59
G G+ L N +M+LRKC NHPYL +GAE P + ++ +GK
Sbjct: 1232 GGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGK 1291
Query: 60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
+V++DKLLPKLKA RVLIFSQM R LDILEDY R + Y R+DG+ RQ I+
Sbjct: 1292 LVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDR 1351
Query: 120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + S+K
Sbjct: 1352 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK 1410
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 48/70 (68%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
RY Y R+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWN
Sbjct: 1330 RYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1389
Query: 273 PQMDLQAMVR 282
PQ DLQA R
Sbjct: 1390 PQNDLQAQAR 1399
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 111/179 (62%), Gaps = 12/179 (6%)
Query: 12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------------PPYTTDEHLVFNSGK 59
G G+ L N +M+LRKC NHPYL +GAE P + ++ +GK
Sbjct: 1222 GGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGK 1281
Query: 60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
+V++DKLLPKLKA RVLIFSQM R LDILEDY R + Y R+DG+ RQ I+
Sbjct: 1282 LVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDR 1341
Query: 120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + S+K
Sbjct: 1342 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK 1400
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 48/70 (68%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
RY Y R+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWN
Sbjct: 1320 RYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1379
Query: 273 PQMDLQAMVR 282
PQ DLQA R
Sbjct: 1380 PQNDLQAQAR 1389
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 111/179 (62%), Gaps = 12/179 (6%)
Query: 12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYTTDEHLVFNSGK 59
G G+ L N +M+LRKC NHPYL +GAE P + ++ +GK
Sbjct: 1233 GGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGK 1292
Query: 60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
+V++DKLLPKLKA RVLIFSQM R LDILEDY R + Y R+DG+ RQ I+
Sbjct: 1293 LVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDR 1352
Query: 120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + S+K
Sbjct: 1353 FSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK 1411
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 48/70 (68%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
RY Y R+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWN
Sbjct: 1331 RYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1390
Query: 273 PQMDLQAMVR 282
PQ DLQA R
Sbjct: 1391 PQNDLQAQAR 1400
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 12/179 (6%)
Query: 12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------------PPYTTDEHLVFNSGK 59
GAG L N +M+LRKC NHPYL +GAE P + +V ++GK
Sbjct: 1077 GAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGK 1136
Query: 60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
+V++DKLLPKLKA +VLIFSQM R LDILEDY R + Y R+DG+ RQ I+
Sbjct: 1137 LVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDR 1196
Query: 120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + ++K
Sbjct: 1197 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1255
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
Query: 162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
LQAMVR A L ++ + + +A H++ I + + E+ + RYLY R
Sbjct: 1127 LQAMVRSAGKL------VLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1180
Query: 219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQ
Sbjct: 1181 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1240
Query: 279 AMVR 282
A R
Sbjct: 1241 AQAR 1244
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 12/179 (6%)
Query: 12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------------PPYTTDEHLVFNSGK 59
GAG L N +M+LRKC NHPYL +GAE P + +V ++GK
Sbjct: 1075 GAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGK 1134
Query: 60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
+V++DKLLPKLKA +VLIFSQM R LDILEDY R + Y R+DG+ RQ I+
Sbjct: 1135 LVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDR 1194
Query: 120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + ++K
Sbjct: 1195 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1253
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
Query: 162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
LQAMVR A L ++ + + +A H++ I + + E+ + RYLY R
Sbjct: 1125 LQAMVRSAGKL------VLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178
Query: 219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQ
Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1238
Query: 279 AMVR 282
A R
Sbjct: 1239 AQAR 1242
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 114/181 (62%), Gaps = 16/181 (8%)
Query: 12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGP-----------PYTTDEHL---VFNS 57
GAG L N +M+LRKC NHPYL +GAE P+ D HL V ++
Sbjct: 1075 GAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPH--DFHLQAMVRSA 1132
Query: 58 GKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQI 117
GK+V++DKLLPKLKA +VLIFSQM R LDILEDY R + Y R+DG+ RQ I
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1192
Query: 118 NDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + ++
Sbjct: 1193 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1252
Query: 178 K 178
K
Sbjct: 1253 K 1253
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
Query: 162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
LQAMVR A L ++ + + +A H++ I + + E+ + RYLY R
Sbjct: 1125 LQAMVRSAGKL------VLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178
Query: 219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQ
Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1238
Query: 279 AMVR 282
A R
Sbjct: 1239 AQAR 1242
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 109/170 (64%), Gaps = 12/170 (7%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDEHL---VFNSGKMVVLDKLLP 68
L N +M+LRKC NHPYL GAE P D HL V ++GK+V+LDKLLP
Sbjct: 1121 LLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLP 1180
Query: 69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
+LKA +VLIFSQM R LDILEDY + + Y R+DG+ RQ I+ F+ SD F
Sbjct: 1181 RLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRF 1240
Query: 129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
+F+L TRAGGLGINL AD V++DSDWNPQ DLQA R +I + ++K
Sbjct: 1241 VFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVK 1290
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
P LQA+VR A L L+ + R +A H++ I + + E+ RY
Sbjct: 1158 PDFHLQALVRSAGKL------VLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRY 1211
Query: 215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
LY R+DG+ RQ I+ F+ SD F+F+L TRAGGLGINL AD V++DSDWNPQ
Sbjct: 1212 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQ 1271
Query: 275 MDLQAMVR 282
DLQA R
Sbjct: 1272 NDLQAQAR 1279
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 111/182 (60%), Gaps = 12/182 (6%)
Query: 9 VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYTTDEHLVFN 56
+ GA + L N +M+LRKC NHPYL +GAE P P + ++
Sbjct: 722 LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQA 781
Query: 57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
+GK+V++DKLLPKL A +VLIFSQM R LDILEDY R + Y R+DG+ RQ
Sbjct: 782 AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA 841
Query: 117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
I+ F SD F+F+L TRAGGLGINL AD +++DSDWNPQ DLQA R +I + +
Sbjct: 842 IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA 901
Query: 177 IK 178
+K
Sbjct: 902 VK 903
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 47/70 (67%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
RY Y R+DG+ RQ I+ F SD F+F+L TRAGGLGINL AD +++DSDWN
Sbjct: 823 RYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 882
Query: 273 PQMDLQAMVR 282
PQ DLQA R
Sbjct: 883 PQNDLQAQAR 892
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 16/170 (9%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN------------SGKMVVLDKLLP 68
L N +MQLRK NHPY+F E + EHL ++ SGK +LD++LP
Sbjct: 1010 LMNTIMQLRKICNHPYMFQHIE----ESFAEHLGYSNGVINGAELYRASGKFELLDRILP 1065
Query: 69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
KL+A RVL+F QMT ++ I+EDY +R F Y RLDG T EDR + FN GS F
Sbjct: 1066 KLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYF 1125
Query: 129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
IF+LSTRAGGLG+NL AD VV++DSDWNP DLQA R +I ++ ++
Sbjct: 1126 IFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1175
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 49/70 (70%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+LY RLDG T EDR + FN GS FIF+LSTRAGGLG+NL AD VV++DSDWNP
Sbjct: 1096 FLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNP 1155
Query: 274 QMDLQAMVRT 283
DLQA R
Sbjct: 1156 HQDLQAQDRA 1165
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEP--GPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESRVL 78
L N +MQLRK NHP++FD E P + L +GK +LD++LPK KA RVL
Sbjct: 752 LNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVL 811
Query: 79 IFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGG 138
+F QMT+++DI+ED+ + KY RLDG T E+R +N FN SD F F+LSTRAGG
Sbjct: 812 MFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGG 871
Query: 139 LGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
LG+NL TAD V+++D+DWNP DLQA R +I ++ ++
Sbjct: 872 LGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVR 911
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%)
Query: 216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
Y RLDG T E+R +N FN SD F F+LSTRAGGLG+NL TAD V+++D+DWNP
Sbjct: 834 YMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 893
Query: 276 DLQAMVR 282
DLQA R
Sbjct: 894 DLQAQDR 900
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 16/170 (9%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN------------SGKMVVLDKLLP 68
L N +MQLRK NHPY+F E + EHL ++ SGK +LD++LP
Sbjct: 1005 LMNTIMQLRKICNHPYMFQHIE----ESFAEHLGYSNGVINGAELYRASGKFELLDRILP 1060
Query: 69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
KL+A RVL+F QMT ++ I+EDY +R F Y RLDG T EDR + FN GS F
Sbjct: 1061 KLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYF 1120
Query: 129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
IF+LSTRAGGLG+NL AD VV++DSDWNP DLQA R +I ++ ++
Sbjct: 1121 IFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1170
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 49/70 (70%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+LY RLDG T EDR + FN GS FIF+LSTRAGGLG+NL AD VV++DSDWNP
Sbjct: 1091 FLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNP 1150
Query: 274 QMDLQAMVRT 283
DLQA R
Sbjct: 1151 HQDLQAQDRA 1160
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
NI+M+L+KC NH YL E E L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct: 753 NIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLI 812
Query: 80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
FSQM RMLDIL +Y + + + RLDG E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct: 813 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 872
Query: 140 GINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
GINLA+AD VV++DSDWNPQ DLQA R +I ++ +
Sbjct: 873 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 910
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
Y + RLDG E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct: 832 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 891
Query: 274 QMDLQAMVRT 283
Q DLQA R
Sbjct: 892 QNDLQAQARA 901
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 7/182 (3%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA------EPGPPYTTDEHLVF 55
+L K+ +N G L NI+M LRKC NHPYLF A P Y L
Sbjct: 525 ILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSS-LTK 583
Query: 56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
SGK+ +L K+L +LKA RVL+FSQMT+ML++LE + G++Y R+DG + RQ+
Sbjct: 584 ASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQK 643
Query: 116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRG 175
I+ FN S+ F+F+LSTRAGGLGINLATAD V+++DSDWNP D+QA R ++ ++
Sbjct: 644 AIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKK 703
Query: 176 SI 177
+
Sbjct: 704 KV 705
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 158 PQMDLQAMVREAKILRRGSIKKA------LEAKMSRYRAPFHQLRIAYGANKGKNYTE-- 209
P +A + + + S+ KA L + + +A H++ + K N E
Sbjct: 562 PSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHF 621
Query: 210 -EEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
E + Y Y R+DG + RQ+ I+ FN S+ F+F+LSTRAGGLGINLATAD V+++D
Sbjct: 622 LEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFD 681
Query: 269 SDWNPQMDLQAMVRT 283
SDWNP D+QA R
Sbjct: 682 SDWNPHNDVQAFSRA 696
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 114/182 (62%), Gaps = 8/182 (4%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE---PGPPYTTDEHL---VF 55
+L K+ D + + NI+++L+KC NH L +E G DE L +
Sbjct: 776 ILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMG--LQQDEALQTLLK 833
Query: 56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
SGK+V+LDKLL +LK RVLIFSQM RMLD+L DY R F + RLDG E R++
Sbjct: 834 GSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQ 893
Query: 116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRG 175
++ FN EGS F F+LSTRAGGLGINLATAD V+++DSDWNPQ DLQA R +I ++
Sbjct: 894 ALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKN 953
Query: 176 SI 177
+
Sbjct: 954 QV 955
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 52/69 (75%)
Query: 214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
+ + RLDG E R++ ++ FN EGS F F+LSTRAGGLGINLATAD V+++DSDWNP
Sbjct: 877 FPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 936
Query: 274 QMDLQAMVR 282
Q DLQA R
Sbjct: 937 QNDLQAQAR 945
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 129/227 (56%), Gaps = 14/227 (6%)
Query: 14 GKLEKMRLQNILMQLRKCSNHPYLFDGAEPG--PPYTTDEHLVFNSGKMVVLDKLLPKLK 71
GK LQN +MQL+K NHP++F+ E P T + L +GK +LD++LPKL
Sbjct: 1141 GKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKLF 1200
Query: 72 AQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFM 131
+ L+F QMT+++ I+EDY + +KY RLDG T +DR + FN SD++IFM
Sbjct: 1201 LTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFM 1260
Query: 132 LSTRAGGLGINLATADVVVLYDSDWNPQMDLQA--------MVREAKILRRGSIKKALEA 183
LSTRAGGLG+NL TAD V+++D+DWNP DLQA +E +ILR + K E
Sbjct: 1261 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEEN 1320
Query: 184 KMSR--YRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL--DGQTAHE 226
+SR Y+ I G K+ EE + +L L DG H+
Sbjct: 1321 ILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHD 1367
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%)
Query: 216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
Y RLDG T +DR + FN SD++IFMLSTRAGGLG+NL TAD V+++D+DWNP
Sbjct: 1230 YLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1289
Query: 276 DLQAMVR 282
DLQA R
Sbjct: 1290 DLQAQDR 1296
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 130/226 (57%), Gaps = 21/226 (9%)
Query: 21 LQNILMQLRKCSNHPYLFDGAEP--GPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESRVL 78
N +MQL+K NHP++F+ E P T++ + +GK +LD++LPKLKA RVL
Sbjct: 1048 FNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVL 1107
Query: 79 IFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGG 138
IF QMT+++DI+ED+ + KY RLDG T ++R + FN S+ F+LSTRAGG
Sbjct: 1108 IFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGG 1167
Query: 139 LGINLATADVVVLYDSDWNPQMDLQAMVR--------EAKILRRGSIKKALEAKMSRYRA 190
LG+NL TAD V+++D+DWNP DLQA R E +ILR + E + R
Sbjct: 1168 LGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERA-- 1225
Query: 191 PFHQLR-----IAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQ 231
+ +L I G K+ +EE++ L LD A E+R+++
Sbjct: 1226 -YKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLD---AEEERRKK 1267
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 185 MSRYRAPFHQLRIAYGANKGKNYTEEEDRYL---YCRLDGQTAHEDRQRQINDFNMEGSD 241
+ + +A H++ I + + + E+ RY+ Y RLDG T ++R + FN S+
Sbjct: 1096 LPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSE 1155
Query: 242 IFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
F+LSTRAGGLG+NL TAD V+++D+DWNP DLQA R
Sbjct: 1156 YLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 1196
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Query: 2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
+L ++ ++ K NI+M+L+KC NH YL + Y E HL+ +SG
Sbjct: 725 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSG 784
Query: 59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y +R F + RLDG E R++ ++
Sbjct: 785 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 844
Query: 119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA R +I ++ +
Sbjct: 845 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 903
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
++ + RLDG E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct: 824 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 883
Query: 273 PQMDLQAMVR 282
PQ DLQA R
Sbjct: 884 PQNDLQAQAR 893
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,155,411
Number of Sequences: 539616
Number of extensions: 4262644
Number of successful extensions: 10687
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 9764
Number of HSP's gapped (non-prelim): 732
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)