BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy10684
MVLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKM
VVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDF
NMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIKKA
LEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGS
DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRTVIAYF

High Scoring Gene Products

Symbol, full name Information P value
Iswi
Imitation SWI 		protein from Drosophila melanogaster 2.3e-95
SMARCA5
Uncharacterized protein 		protein from Gallus gallus 2.3e-91
SMARCA1
Uncharacterized protein 		protein from Gallus gallus 1.3e-90
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 		gene_product from Danio rerio 2.2e-90
SMARCA1
Uncharacterized protein 		protein from Sus scrofa 2.4e-90
si:dkey-148b12.1 gene_product from Danio rerio 2.7e-90
SMARCA5
Uncharacterized protein 		protein from Bos taurus 3.4e-90
SMARCA5
Uncharacterized protein 		protein from Canis lupus familiaris 3.4e-90
SMARCA5
Uncharacterized protein 		protein from Sus scrofa 3.4e-90
LOC100359912
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like 		gene from Rattus norvegicus 3.4e-90
Smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 		protein from Mus musculus 5.8e-90
Smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 		gene from Rattus norvegicus 5.8e-90
SMARCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 		protein from Homo sapiens 6.0e-90
SMARCA1
Uncharacterized protein 		protein from Canis lupus familiaris 3.5e-89
SMARCA1
Uncharacterized protein 		protein from Bos taurus 4.0e-88
Smarca1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 		protein from Mus musculus 1.2e-87
SMARCA1
Uncharacterized protein 		protein from Sus scrofa 3.2e-87
SMARCA1
Probable global transcription activator SNF2L1 		protein from Homo sapiens 4.1e-87
SMARCA1
Uncharacterized protein 		protein from Sus scrofa 4.2e-87
SMARCA1
Uncharacterized protein 		protein from Sus scrofa 9.2e-87
SMARCA1
Probable global transcription activator SNF2L1 		protein from Homo sapiens 1.2e-86
Smarca1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 		gene from Rattus norvegicus 2.6e-85
isw-1 gene from Caenorhabditis elegans 5.3e-84
CHR17
chromatin remodeling factor17 		protein from Arabidopsis thaliana 2.5e-72
MGG_01012
ISWI chromatin-remodeling complex ATPase ISW2 		protein from Magnaporthe oryzae 70-15 3.9e-72
SMARCA1
Uncharacterized protein 		protein from Sus scrofa 2.9e-71
ISW1
ATPase subunit of imitation-switch (ISWI) class chromatin remodelers 		gene from Saccharomyces cerevisiae 1.8e-69
ISW2
ATP-dependent DNA translocase involved in chromatin remodeling 		gene from Saccharomyces cerevisiae 1.2e-66
ISW2 gene_product from Candida albicans 4.1e-64
ISW2
ISWI chromatin-remodeling complex ATPase ISW2 		protein from Candida albicans SC5314 4.1e-64
isw
CHR group protein 		gene from Dictyostelium discoideum 8.4e-61
PF11_0053
PfSNF2L 		gene from Plasmodium falciparum 4.4e-51
PF11_0053
PfSNF2L 		protein from Plasmodium falciparum 3D7 4.4e-51
HELLS
Uncharacterized protein 		protein from Bos taurus 6.0e-43
HELLS
Uncharacterized protein 		protein from Canis lupus familiaris 6.7e-43
HELLS
Uncharacterized protein 		protein from Gallus gallus 2.3e-42
HELLS
Uncharacterized protein 		protein from Sus scrofa 3.0e-42
SMARCA1
Uncharacterized protein 		protein from Canis lupus familiaris 3.4e-42
CHD1L
Chromodomain-helicase-DNA-binding protein 1-like 		protein from Homo sapiens 5.2e-42
CHD1L
Chromodomain-helicase-DNA-binding protein 1-like 		protein from Bos taurus 1.7e-41
CHR5
AT2G13370 		protein from Arabidopsis thaliana 2.5e-41
Hells
helicase, lymphoid specific 		gene from Rattus norvegicus 2.8e-41
CHD1L
Chromodomain-helicase-DNA-binding protein 1-like 		protein from Homo sapiens 4.5e-41
Chd1l
chromodomain helicase DNA binding protein 1-like 		protein from Mus musculus 4.6e-41
Chd1l
chromodomain helicase DNA binding protein 1-like 		gene from Rattus norvegicus 4.6e-41
CHD1L
Uncharacterized protein 		protein from Sus scrofa 4.7e-41
HELLS
Lymphoid-specific helicase 		protein from Homo sapiens 7.7e-41
Hells
helicase, lymphoid specific 		protein from Mus musculus 1.9e-40
hells
helicase, lymphoid-specific 		gene_product from Danio rerio 2.4e-40
CHD1L
Chromodomain-helicase-DNA-binding protein 1-like 		protein from Bos taurus 2.6e-40
chd1l
chromodomain helicase DNA binding protein 1-like 		gene_product from Danio rerio 3.7e-40
let-418 gene from Caenorhabditis elegans 4.0e-40
let-418
Protein let-418 		protein from Caenorhabditis elegans 4.0e-40
CHD1L
Uncharacterized protein 		protein from Gallus gallus 5.4e-40
orf19.3035 gene_product from Candida albicans 2.4e-39
CHD5
Chromodomain-helicase-DNA-binding protein 5 		protein from Homo sapiens 2.5e-39
HELLS
cDNA FLJ10339 fis, clone NT2RM2000740, weakly similar to POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L 		protein from Homo sapiens 2.9e-39
LOC100738053
Uncharacterized protein 		protein from Sus scrofa 1.2e-38
LOC100738053
Uncharacterized protein 		protein from Sus scrofa 1.4e-38
CHD5
Uncharacterized protein 		protein from Canis lupus familiaris 1.6e-38
brm
brahma 		protein from Drosophila melanogaster 1.7e-38
Chd5
chromodomain helicase DNA binding protein 5 		gene from Rattus norvegicus 1.9e-38
CHD5
Chromodomain-helicase-DNA-binding protein 5 		protein from Homo sapiens 2.0e-38
chd-3 gene from Caenorhabditis elegans 2.5e-38
chd-3
Chromodomain-helicase-DNA-binding protein 3 homolog 		protein from Caenorhabditis elegans 2.5e-38
CHD1
Chromatin remodeler that regulates various aspects of transcription 		gene from Saccharomyces cerevisiae 6.2e-38
CHD5
Uncharacterized protein 		protein from Canis lupus familiaris 7.1e-38
CHD3
Uncharacterized protein 		protein from Sus scrofa 7.1e-38
CHD5
Chromodomain-helicase-DNA-binding protein 5 		protein from Homo sapiens 7.4e-38
F1MFF9
Uncharacterized protein 		protein from Bos taurus 8.8e-38
Chd3
chromodomain helicase DNA binding protein 3 		gene from Rattus norvegicus 1.2e-37
CHD3
Chromodomain-helicase-DNA-binding protein 3 		protein from Homo sapiens 1.3e-37
CHD9
Chromodomain-helicase-DNA-binding protein 9 		protein from Homo sapiens 1.5e-37
CHD9
Uncharacterized protein 		protein from Canis lupus familiaris 1.9e-37
LOC100622433
Uncharacterized protein 		protein from Sus scrofa 1.9e-37
LOC100622433
Uncharacterized protein 		protein from Sus scrofa 2.0e-37
CHD3
Uncharacterized protein 		protein from Bos taurus 2.1e-37
CHD5
Uncharacterized protein 		protein from Gallus gallus 2.2e-37
CHD9
Chromodomain-helicase-DNA-binding protein 9 		protein from Homo sapiens 2.6e-37
CHD3
Uncharacterized protein 		protein from Canis lupus familiaris 2.6e-37
CHD9
Uncharacterized protein 		protein from Bos taurus 3.0e-37
CHD1
Chromodomain-helicase-DNA-binding protein 1 		protein from Gallus gallus 4.4e-37
CHD1Z
Uncharacterized protein 		protein from Gallus gallus 4.7e-37
CHD1Z
Uncharacterized protein 		protein from Gallus gallus 4.7e-37
SMARCA4
Transcription activator BRG1 		protein from Homo sapiens 5.3e-37
Mi-2 protein from Drosophila melanogaster 5.4e-37
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_c 		protein from Homo sapiens 5.4e-37
CHD1
Chromodomain-helicase-DNA-binding protein 1 		protein from Homo sapiens 5.6e-37
Chd1
chromodomain helicase DNA binding protein 1 		protein from Mus musculus 5.6e-37
CHD1
Uncharacterized protein 		protein from Canis lupus familiaris 5.6e-37
CHD1
Uncharacterized protein 		protein from Canis lupus familiaris 5.9e-37
CHD1
Uncharacterized protein 		protein from Bos taurus 6.1e-37

The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy10684
        (288 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227...   765  2.3e-95   2
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei...   726  2.3e-91   2
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei...   711  1.3e-90   2
ZFIN|ZDB-GENE-021125-1 - symbol:smarca5 "SWI/SNF related,...   717  2.2e-90   2
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei...   721  2.4e-90   2
ZFIN|ZDB-GENE-070705-296 - symbol:si:dkey-148b12.1 "si:dk...   718  2.7e-90   2
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei...   718  3.4e-90   2
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei...   718  3.4e-90   2
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei...   718  3.4e-90   2
RGD|2323132 - symbol:LOC100359912 "SWI/SNF-related matrix...   716  3.4e-90   2
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix...   716  5.8e-90   2
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass...   716  5.8e-90   2
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix...   716  6.0e-90   2
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei...   712  3.5e-89   2
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei...   527  4.0e-88   3
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix...   697  1.2e-87   2
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei...   694  3.2e-87   2
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc...   689  4.1e-87   2
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei...   694  4.2e-87   2
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei...   691  9.2e-87   2
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc...   689  1.2e-86   2
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass...   676  2.6e-85   2
WB|WBGene00002169 - symbol:isw-1 species:6239 "Caenorhabd...   681  5.3e-84   2
TAIR|locus:2182978 - symbol:CHR17 "chromatin remodeling f...   629  2.5e-72   2
UNIPROTKB|G4NCV5 - symbol:MGG_01012 "ISWI chromatin-remod...   654  3.9e-72   2
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei...   721  2.9e-71   1
SGD|S000000449 - symbol:ISW1 "ATPase subunit of imitation...   648  1.8e-69   2
SGD|S000005831 - symbol:ISW2 "ATP-dependent DNA transloca...   649  1.2e-66   2
CGD|CAL0005422 - symbol:ISW2 species:5476 "Candida albica...   660  4.1e-64   1
UNIPROTKB|Q5A310 - symbol:ISW2 "Putative uncharacterized ...   660  4.1e-64   1
DICTYBASE|DDB_G0292948 - symbol:isw "CHR group protein" s...   547  8.4e-61   2
GENEDB_PFALCIPARUM|PF11_0053 - symbol:PF11_0053 "PfSNF2L"...   543  4.4e-51   1
UNIPROTKB|Q8IIW0 - symbol:PF11_0053 "PfSNF2L" species:363...   543  4.4e-51   1
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"...   461  6.0e-43   1
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"...   461  6.7e-43   1
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"...   456  2.3e-42   1
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"...   455  3.0e-42   1
UNIPROTKB|J9NZH0 - symbol:SMARCA1 "Uncharacterized protei...   278  3.4e-42   2
UNIPROTKB|B5MDZ7 - symbol:CHD1L "Chromodomain-helicase-DN...   445  5.2e-42   1
UNIPROTKB|Q3B7N1 - symbol:CHD1L "Chromodomain-helicase-DN...   449  1.7e-41   1
TAIR|locus:2041644 - symbol:CHR5 "chromatin remodeling 5"...   435  2.5e-41   2
RGD|1309820 - symbol:Hells "helicase, lymphoid specific" ...   438  2.8e-41   1
UNIPROTKB|Q86WJ1 - symbol:CHD1L "Chromodomain-helicase-DN...   445  4.5e-41   1
MGI|MGI:1915308 - symbol:Chd1l "chromodomain helicase DNA...   445  4.6e-41   1
RGD|1311935 - symbol:Chd1l "chromodomain helicase DNA bin...   445  4.6e-41   1
UNIPROTKB|F1SDB8 - symbol:CHD1L "Uncharacterized protein"...   445  4.7e-41   1
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica...   442  7.7e-41   1
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi...   438  1.9e-40   1
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph...   423  2.4e-40   2
UNIPROTKB|F1MFS2 - symbol:CHD1L "Chromodomain-helicase-DN...   438  2.6e-40   1
ZFIN|ZDB-GENE-040426-892 - symbol:chd1l "chromodomain hel...   438  3.7e-40   1
POMBASE|SPAC1783.05 - symbol:hrp1 "ATP-dependent DNA heli...   411  3.8e-40   2
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha...   442  4.0e-40   1
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci...   442  4.0e-40   1
UNIPROTKB|F1NS62 - symbol:CHD1L "Uncharacterized protein"...   435  5.4e-40   1
CGD|CAL0001390 - symbol:orf19.3035 species:5476 "Candida ...   433  2.4e-39   1
UNIPROTKB|K7EMY3 - symbol:CHD5 "Chromodomain-helicase-DNA...   420  2.5e-39   2
UNIPROTKB|Q9NW36 - symbol:HELLS "cDNA FLJ10339 fis, clone...   419  2.9e-39   1
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ...   420  1.2e-38   2
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ...   420  1.4e-38   2
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ...   420  1.6e-38   2
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop...   426  1.7e-38   1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind...   420  1.9e-38   2
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA...   420  2.0e-38   2
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd...   425  2.5e-38   1
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN...   425  2.5e-38   1
POMBASE|SPAC3G6.01 - symbol:hrp3 "ATP-dependent DNA helic...   413  3.8e-38   2
SGD|S000000966 - symbol:CHD1 "Chromatin remodeler that re...   420  6.2e-38   1
ASPGD|ASPL0000052010 - symbol:AN1255 species:162425 "Emer...   420  6.5e-38   1
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ...   418  7.1e-38   1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ...   416  7.1e-38   2
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA...   418  7.4e-38   1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote...   420  8.8e-38   1
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind...   419  1.2e-37   1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA...   419  1.3e-37   1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101...   419  1.3e-37   1
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101...   419  1.3e-37   1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA...   419  1.3e-37   1
UNIPROTKB|Q3L8U1 - symbol:CHD9 "Chromodomain-helicase-DNA...   412  1.5e-37   2
UNIPROTKB|E2RDK8 - symbol:CHD9 "Uncharacterized protein" ...   412  1.9e-37   2
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p...   411  1.9e-37   1
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p...   412  2.0e-37   1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ...   417  2.1e-37   1
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein...   416  2.2e-37   1
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA...   412  2.6e-37   1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ...   416  2.6e-37   1
UNIPROTKB|E1BDZ3 - symbol:CHD9 "Uncharacterized protein" ...   412  3.0e-37   2
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato...   412  3.4e-37   1
UNIPROTKB|F1N8K9 - symbol:CHD1 "Chromodomain-helicase-DNA...   399  3.9e-37   1
UNIPROTKB|B6ZLK2 - symbol:CHD1 "Chromodomain-helicase-DNA...   413  4.4e-37   1
UNIPROTKB|F1NP27 - symbol:CHD1 "Chromodomain-helicase-DNA...   413  4.7e-37   1
UNIPROTKB|F1N8K8 - symbol:CHD1 "Chromodomain-helicase-DNA...   413  4.7e-37   1
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato...   412  5.3e-37   1
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel...   413  5.4e-37   1
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe...   412  5.4e-37   1
UNIPROTKB|O14646 - symbol:CHD1 "Chromodomain-helicase-DNA...   412  5.6e-37   1
MGI|MGI:88393 - symbol:Chd1 "chromodomain helicase DNA bi...   412  5.6e-37   1
UNIPROTKB|E2QUI5 - symbol:CHD1 "Uncharacterized protein" ...   412  5.6e-37   1
UNIPROTKB|J9P6Y8 - symbol:CHD1 "Uncharacterized protein" ...   412  5.9e-37   1
UNIPROTKB|F1MGF2 - symbol:CHD1 "Uncharacterized protein" ...   412  6.1e-37   1

WARNING:  Descriptions of 389 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0011604 [details] [associations]
            symbol:Iswi "Imitation SWI" species:7227 "Drosophila
            melanogaster" [GO:0006338 "chromatin remodeling"
            evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
            evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
            evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
            [GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
            complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
            evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
            mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
            evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
            [GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0006351 "transcription,
            DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
            complex" evidence=IPI] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IPI]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
            receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
            "muscle organ development" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
            rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
            evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
            [GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
            [GO:0035063 "nuclear speck organization" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
            GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
            GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
            GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
            GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
            ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
            SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
            RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
            UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
            SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
            STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
            EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
            KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
            InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
            EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
            Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
            GO:GO:0035063 Uniprot:Q24368
        Length = 1027

 Score = 765 (274.4 bits), Expect = 2.3e-95, Sum P(2) = 2.3e-95
 Identities = 141/177 (79%), Positives = 159/177 (89%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             VL+KDIDVVNGAGK+EKMRLQNILMQLRKC+NHPYLFDGAEPGPPYTTD HLV+NSGKM 
Sbjct:   375 VLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMA 434

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLLPKL+ Q SRVLIFSQMTRMLDILEDYC+WR + YCRLDGQT HEDR RQI +FN
Sbjct:   435 ILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFN 494

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             M+ S  F+FMLSTRAGGLGINLATADVV++YDSDWNPQMDLQAM R  +I ++  ++
Sbjct:   495 MDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVR 551

 Score = 300 (110.7 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 56/69 (81%), Positives = 61/69 (88%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT HEDR RQI +FNM+ S  F+FMLSTRAGGLGINLATADVV++YDSDWNP
Sbjct:   472 YNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNP 531

Query:   274 QMDLQAMVR 282
             QMDLQAM R
Sbjct:   532 QMDLQAMDR 540

 Score = 203 (76.5 bits), Expect = 2.3e-95, Sum P(2) = 2.3e-95
 Identities = 40/52 (76%), Positives = 43/52 (82%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             E KI RR SIKKAL+ KMSRYRAPFHQLR+ YG NKGKNYTE EDR+L C L
Sbjct:   863 EGKIQRRLSIKKALDQKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCML 914


>UNIPROTKB|E1C0M8 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
            chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
            silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
            [GO:0009790 "embryo development" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
            GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
            IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
            Uniprot:E1C0M8
        Length = 1038

 Score = 726 (260.6 bits), Expect = 2.3e-91, Sum P(2) = 2.3e-91
 Identities = 136/170 (80%), Positives = 150/170 (88%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGKL+KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   412 ILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 471

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   472 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYN 531

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
               GS  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   532 EPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 581

 Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 53/69 (76%), Positives = 59/69 (85%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N  GS  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   509 YEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNP 568

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   569 QVDLQAMDR 577

 Score = 208 (78.3 bits), Expect = 2.3e-91, Sum P(2) = 2.3e-91
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   893 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 944


>UNIPROTKB|F1P3Q4 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007420 "brain development" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
            complex" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0036310 "annealing helicase activity"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
            GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
            SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
            IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
        Length = 982

 Score = 711 (255.3 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
 Identities = 131/177 (74%), Positives = 153/177 (86%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HL+ NSGKM+
Sbjct:   354 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKML 413

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLL KL+ Q SRVL+FSQMTR+LDILEDYC WRG++YCRLDGQT HE+R+  I+ FN
Sbjct:   414 VLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 473

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
                S  FIFMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I ++  ++
Sbjct:   474 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVR 530

 Score = 278 (102.9 bits), Expect = 4.7e-23, P = 4.7e-23
 Identities = 53/69 (76%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT HE+R+  I+ FN   S  FIFMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   451 YEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNP 510

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   511 QVDLQAMDR 519

 Score = 212 (79.7 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
 Identities = 45/82 (54%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG NKGKNYTEEEDR+L C L     D +
Sbjct:   835 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKE 894

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   895 NVYEELRQCVRNAPQFRFDWFI 916


>ZFIN|ZDB-GENE-021125-1 [details] [associations]
            symbol:smarca5 "SWI/SNF related, matrix associated,
            actin dependent regulator of chromatin, subfamily a, member 5"
            species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
            GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
            IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
            ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
        Length = 1035

 Score = 717 (257.5 bits), Expect = 2.2e-90, Sum P(2) = 2.2e-90
 Identities = 134/177 (75%), Positives = 152/177 (85%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL N+LMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   410 ILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMV 469

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR + YCRLDGQT HE+RQ  IN FN
Sbjct:   470 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFN 529

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
                S  F+FMLSTRAGGLGINLATADVV++YDSDWNPQ+DLQAM R  +I ++  ++
Sbjct:   530 EPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVR 586

 Score = 277 (102.6 bits), Expect = 6.5e-23, P = 6.5e-23
 Identities = 53/69 (76%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT HE+RQ  IN FN   S  F+FMLSTRAGGLGINLATADVV++YDSDWNP
Sbjct:   507 YGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNP 566

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   567 QVDLQAMDR 575

 Score = 209 (78.6 bits), Expect = 2.2e-90, Sum P(2) = 2.2e-90
 Identities = 39/52 (75%), Positives = 46/52 (88%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL++K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   890 EARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 941


>UNIPROTKB|K7GNV1 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
            Uniprot:K7GNV1
        Length = 1061

 Score = 721 (258.9 bits), Expect = 2.4e-90, Sum P(2) = 2.4e-90
 Identities = 135/177 (76%), Positives = 154/177 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   433 ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 492

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R+  I  FN
Sbjct:   493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 552

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             +  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  +I ++  ++
Sbjct:   553 VPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVR 609

 Score = 274 (101.5 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT HE+R+  I  FN+  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNP
Sbjct:   530 YEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNP 589

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   590 QVDLQAMDR 598

 Score = 207 (77.9 bits), Expect = 2.4e-90, Sum P(2) = 2.4e-90
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   914 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 973

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   974 NVYEELRQCVRNAPQFRFDWFI 995

 Score = 52 (23.4 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query:   144 ATADVVVLYDSDWNPQMDLQ---AMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYG 200
             ATA +VV+ D    P +  +   A    A      + +K  E K  +  +PF QL++A  
Sbjct:    17 ATATIVVIEDEQPGPSISKEEGAAAAATASTEATVATEKG-EKKKEKNASPF-QLKLAAK 74

Query:   201 ANKGKNYTEEE 211
             A+K +   + E
Sbjct:    75 ASKSEKEMDPE 85

 Score = 39 (18.8 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   827 DGAEPLTPEETEE 839


>ZFIN|ZDB-GENE-070705-296 [details] [associations]
            symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
            EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
            UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
            GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
            Uniprot:A5WUY4
        Length = 1036

 Score = 718 (257.8 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
 Identities = 135/177 (76%), Positives = 152/177 (85%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   389 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVINSGKMV 448

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
              LDKLLPK++ Q SRVLIFSQMTR+LDILEDYC WRGF+YCRLDG T HE R++ I+ FN
Sbjct:   449 ALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFN 508

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
                S  FIFMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I +R  +K
Sbjct:   509 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVK 565

 Score = 265 (98.3 bits), Expect = 1.2e-21, P = 1.2e-21
 Identities = 51/67 (76%), Positives = 56/67 (83%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             YCRLDG T HE R++ I+ FN   S  FIFMLSTRAGGLGINLATADVV+LYDSDWNPQ+
Sbjct:   488 YCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQV 547

Query:   276 DLQAMVR 282
             DLQAM R
Sbjct:   548 DLQAMDR 554

 Score = 207 (77.9 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K++RY+APFHQLRI YG NKGKNYTEEEDR+L C L
Sbjct:   893 EARIQRRISIKKALDVKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICML 944


>UNIPROTKB|F1N052 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
            complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0009790 "embryo development"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
            GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
            GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
            Ensembl:ENSBTAT00000004408 Uniprot:F1N052
        Length = 1052

 Score = 718 (257.8 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 134/170 (78%), Positives = 149/170 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   427 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 486

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596

 Score = 277 (102.6 bits), Expect = 6.6e-23, P = 6.6e-23
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N   S  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   524 YEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 583

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   584 QVDLQAMDR 592

 Score = 208 (78.3 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   908 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 959


>UNIPROTKB|E2QWV0 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            [GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
            "embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
            assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
            "chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
            GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
            GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
            SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
            EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
            Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
            NextBio:20851293 Uniprot:E2QWV0
        Length = 1052

 Score = 718 (257.8 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 134/170 (78%), Positives = 149/170 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   427 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 486

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596

 Score = 277 (102.6 bits), Expect = 6.6e-23, P = 6.6e-23
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N   S  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   524 YEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 583

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   584 QVDLQAMDR 592

 Score = 208 (78.3 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   908 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 959


>UNIPROTKB|F1RRG9 [details] [associations]
            symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
            complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            [GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0009790 "embryo development"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
            GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
            GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
            GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
            UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
            KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
        Length = 1052

 Score = 718 (257.8 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 134/170 (78%), Positives = 149/170 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   427 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 486

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596

 Score = 277 (102.6 bits), Expect = 6.6e-23, P = 6.6e-23
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N   S  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   524 YEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 583

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   584 QVDLQAMDR 592

 Score = 208 (78.3 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   908 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 959


>RGD|2323132 [details] [associations]
            symbol:LOC100359912 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin a5-like" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
            GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
            Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
        Length = 760

 Score = 716 (257.1 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 134/170 (78%), Positives = 149/170 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   148 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 207

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   208 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 267

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   268 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 317

 Score = 275 (101.9 bits), Expect = 6.2e-23, P = 6.2e-23
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N   S  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   245 YEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 304

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   305 QVDLQAMDR 313

 Score = 203 (76.5 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
 Identities = 38/52 (73%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEE+R+L C L
Sbjct:   629 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEENRFLICML 680


>MGI|MGI:1935129 [details] [associations]
            symbol:Smarca5 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 5"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=ISO] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
            break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
            evidence=ISO] [GO:0006338 "chromatin remodeling"
            evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
            initiation" evidence=ISO] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
            "NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
            MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
            GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
            GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
            GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
            GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
            HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
            EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
            EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
            ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
            MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
            PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
            UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
            Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
        Length = 1051

 Score = 716 (257.1 bits), Expect = 5.8e-90, Sum P(2) = 5.8e-90
 Identities = 134/170 (78%), Positives = 149/170 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   426 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 485

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 595

 Score = 275 (101.9 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N   S  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   523 YEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 582

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   583 QVDLQAMDR 591

 Score = 208 (78.3 bits), Expect = 5.8e-90, Sum P(2) = 5.8e-90
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   907 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 958


>RGD|1308832 [details] [associations]
            symbol:Smarca5 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 5"
            species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
            at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006302 "double-strand break repair"
            evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
            evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
            "DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
            "embryo development" evidence=ISO] [GO:0016584 "nucleosome
            positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
            complex" evidence=ISO] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
            replication fork" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
            IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
            UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
        Length = 1051

 Score = 716 (257.1 bits), Expect = 5.8e-90, Sum P(2) = 5.8e-90
 Identities = 134/170 (78%), Positives = 149/170 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   426 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 485

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 595

 Score = 275 (101.9 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N   S  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   523 YEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 582

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   583 QVDLQAMDR 591

 Score = 208 (78.3 bits), Expect = 5.8e-90, Sum P(2) = 5.8e-90
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   907 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 958


>UNIPROTKB|O60264 [details] [associations]
            symbol:SMARCA5 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member 5"
            species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
            "chromatin silencing complex" evidence=IEA] [GO:0006302
            "double-strand break repair" evidence=IEA] [GO:0009790 "embryo
            development" evidence=IEA] [GO:0006334 "nucleosome assembly"
            evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
            [GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
            complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
            chromosome" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
            "CENP-A containing nucleosome assembly at centromere" evidence=TAS]
            [GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
            catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
            GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
            GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
            GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
            OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
            EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
            UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
            IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
            PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
            Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
            CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
            HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
            InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
            ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
            Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
        Length = 1052

 Score = 716 (257.1 bits), Expect = 6.0e-90, Sum P(2) = 6.0e-90
 Identities = 134/170 (78%), Positives = 149/170 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDID++N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTD HLV NSGKMV
Sbjct:   427 ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMV 486

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLLPKLK Q SRVLIFSQMTR+LDILEDYC WR ++YCRLDGQT H++RQ  IN +N
Sbjct:   487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 546

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  F+FMLSTRAGGLGINLATADVV+LYDSDWNPQ+DLQAM R  +I
Sbjct:   547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596

 Score = 275 (101.9 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT H++RQ  IN +N   S  F+FMLSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   524 YEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 583

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   584 QVDLQAMDR 592

 Score = 208 (78.3 bits), Expect = 6.0e-90, Sum P(2) = 6.0e-90
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL 219
             EA+I RR SIKKAL+ K+ RY+APFHQLRI+YG NKGKNYTEEEDR+L C L
Sbjct:   908 EARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML 959


>UNIPROTKB|E2QVR5 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
            Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
        Length = 1073

 Score = 712 (255.7 bits), Expect = 3.5e-89, Sum P(2) = 3.5e-89
 Identities = 135/179 (75%), Positives = 155/179 (86%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   443 ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 502

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ--IND 119
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R+++  I  
Sbjct:   503 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAIEA 562

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  +I ++  ++
Sbjct:   563 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVR 621

 Score = 265 (98.3 bits), Expect = 1.3e-21, P = 1.3e-21
 Identities = 52/71 (73%), Positives = 59/71 (83%)

Query:   214 YLYCRLDGQTAHEDRQRQ--INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDW 271
             Y YCRLDGQT HE+R+++  I  FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDW
Sbjct:   540 YEYCRLDGQTPHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDW 599

Query:   272 NPQMDLQAMVR 282
             NPQ+DLQAM R
Sbjct:   600 NPQVDLQAMDR 610

 Score = 207 (77.9 bits), Expect = 3.5e-89, Sum P(2) = 3.5e-89
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   926 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 985

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   986 NVYEELRQCVRNAPQFRFDWFI 1007

 Score = 39 (18.8 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   839 DGAEPLTPEETEE 851


>UNIPROTKB|F1N166 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
            activity" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
            GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
            Ensembl:ENSBTAT00000002973 Uniprot:F1N166
        Length = 1078

 Score = 527 (190.6 bits), Expect = 4.0e-88, Sum P(3) = 4.0e-88
 Identities = 96/121 (79%), Positives = 108/121 (89%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   433 ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 492

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R+  + DF 
Sbjct:   493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEILKDFK 552

Query:   122 M 122
             +
Sbjct:   553 I 553

 Score = 208 (78.3 bits), Expect = 4.0e-88, Sum P(3) = 4.0e-88
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
             ++     I  FN+  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  
Sbjct:   558 YQGSNEAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 617

Query:   170 KILRRGSIK 178
             +I ++  ++
Sbjct:   618 RIGQKKPVR 626

 Score = 207 (77.9 bits), Expect = 4.0e-88, Sum P(3) = 4.0e-88
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   931 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 990

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   991 NVYEELRQCVRNAPQFRFDWFI 1012

 Score = 204 (76.9 bits), Expect = 2.6e-68, Sum P(2) = 2.6e-68
 Identities = 40/58 (68%), Positives = 46/58 (79%)

Query:   225 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             ++     I  FN+  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R
Sbjct:   558 YQGSNEAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR 615

 Score = 49 (22.3 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
 Identities = 21/79 (26%), Positives = 36/79 (45%)

Query:   136 AGGLGINLATADVVVLYDSDWNPQMDLQ---AMVREAKILRRGSIKKALEAKMSRYRAPF 192
             AG +  + ATA +V++ D    P    +   A    A      + +K  E K  +  +PF
Sbjct:     9 AGTVAASDATAAIVLIEDDQPGPSTSKEEGAAAAATAATEATVATEKG-EKKKEKNVSPF 67

Query:   193 HQLRIAYGANKGKNYTEEE 211
              QL++A  A+K +   + E
Sbjct:    68 -QLKLAVKASKSEKEMDPE 85

 Score = 39 (18.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   844 DGAEPLTPEETEE 856


>MGI|MGI:1935127 [details] [associations]
            symbol:Smarca1 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
            remodeling" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
            development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
            [GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
            neural precursor cell proliferation" evidence=IGI;IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
            GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
            GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
            CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
            EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
            RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
            ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
            PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
            Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
            Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
            UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
            NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
            GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
        Length = 1046

 Score = 697 (250.4 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
 Identities = 130/177 (73%), Positives = 152/177 (85%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N +GK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   434 ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMV 493

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
              LDKLL ++K Q SRVLIFSQMTR+LDILEDYC WRG++Y RLDGQT HE+R+  I+ FN
Sbjct:   494 ALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN 553

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
                S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  +I ++  ++
Sbjct:   554 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVR 610

 Score = 263 (97.6 bits), Expect = 2.1e-21, P = 2.1e-21
 Identities = 51/69 (73%), Positives = 57/69 (82%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDGQT HE+R+  I+ FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNP
Sbjct:   531 YEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNP 590

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   591 QVDLQAMDR 599

 Score = 207 (77.9 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   915 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 974

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   975 NVYEELRQCVRNAPQFRFDWFI 996

 Score = 40 (19.1 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   828 DGAEPLTPQETEE 840


>UNIPROTKB|K7GMM0 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
            Uniprot:K7GMM0
        Length = 1057

 Score = 694 (249.4 bits), Expect = 3.2e-87, Sum P(2) = 3.2e-87
 Identities = 137/189 (72%), Positives = 156/189 (82%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   433 ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 492

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR-------- 113
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R        
Sbjct:   493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVE 552

Query:   114 ---QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
                QR+ I  FN+  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  
Sbjct:   553 LLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 612

Query:   170 KILRRGSIK 178
             +I ++  ++
Sbjct:   613 RIGQKKPVR 621

 Score = 247 (92.0 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
 Identities = 54/81 (66%), Positives = 60/81 (74%)

Query:   214 YLYCRLDGQTAHEDR-----------QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATA 261
             Y YCRLDGQT HE+R           QR+ I  FN+  S  FIFMLSTRAGGLGINLA+A
Sbjct:   530 YEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASA 589

Query:   262 DVVVLYDSDWNPQMDLQAMVR 282
             DVV+LYDSDWNPQ+DLQAM R
Sbjct:   590 DVVILYDSDWNPQVDLQAMDR 610

 Score = 207 (77.9 bits), Expect = 3.2e-87, Sum P(2) = 3.2e-87
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   926 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 985

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   986 NVYEELRQCVRNAPQFRFDWFI 1007

 Score = 52 (23.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query:   144 ATADVVVLYDSDWNPQMDLQ---AMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYG 200
             ATA +VV+ D    P +  +   A    A      + +K  E K  +  +PF QL++A  
Sbjct:    17 ATATIVVIEDEQPGPSISKEEGAAAAATASTEATVATEKG-EKKKEKNASPF-QLKLAAK 74

Query:   201 ANKGKNYTEEE 211
             A+K +   + E
Sbjct:    75 ASKSEKEMDPE 85

 Score = 39 (18.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   839 DGAEPLTPEETEE 851


>UNIPROTKB|F6TQG2 [details] [associations]
            symbol:SMARCA1 "Probable global transcription activator
            SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
            EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
            ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
            Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
            Uniprot:F6TQG2
        Length = 1005

 Score = 689 (247.6 bits), Expect = 4.1e-87, Sum P(2) = 4.1e-87
 Identities = 136/189 (71%), Positives = 155/189 (82%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N +GK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   409 ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 468

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR-------- 113
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R        
Sbjct:   469 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVE 528

Query:   114 ---QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
                QR+ I  FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  
Sbjct:   529 FLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 588

Query:   170 KILRRGSIK 178
             +I ++  ++
Sbjct:   589 RIGQKKPVR 597

 Score = 245 (91.3 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 54/81 (66%), Positives = 59/81 (72%)

Query:   214 YLYCRLDGQTAHEDR-----------QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATA 261
             Y YCRLDGQT HE+R           QR+ I  FN   S  FIFMLSTRAGGLGINLA+A
Sbjct:   506 YEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASA 565

Query:   262 DVVVLYDSDWNPQMDLQAMVR 282
             DVV+LYDSDWNPQ+DLQAM R
Sbjct:   566 DVVILYDSDWNPQVDLQAMDR 586

 Score = 207 (77.9 bits), Expect = 4.1e-87, Sum P(2) = 4.1e-87
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   902 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 961

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   962 NVYEELRQCVRNAPQFRFDWFI 983

 Score = 39 (18.8 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   815 DGAEPLTPEETEE 827


>UNIPROTKB|K7GLQ2 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
            "nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
            RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
            Uniprot:K7GLQ2
        Length = 1073

 Score = 694 (249.4 bits), Expect = 4.2e-87, Sum P(2) = 4.2e-87
 Identities = 137/189 (72%), Positives = 156/189 (82%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   433 ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 492

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR-------- 113
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R        
Sbjct:   493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVE 552

Query:   114 ---QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
                QR+ I  FN+  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  
Sbjct:   553 LLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 612

Query:   170 KILRRGSIK 178
             +I ++  ++
Sbjct:   613 RIGQKKPVR 621

 Score = 247 (92.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
 Identities = 54/81 (66%), Positives = 60/81 (74%)

Query:   214 YLYCRLDGQTAHEDR-----------QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATA 261
             Y YCRLDGQT HE+R           QR+ I  FN+  S  FIFMLSTRAGGLGINLA+A
Sbjct:   530 YEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASA 589

Query:   262 DVVVLYDSDWNPQMDLQAMVR 282
             DVV+LYDSDWNPQ+DLQAM R
Sbjct:   590 DVVILYDSDWNPQVDLQAMDR 610

 Score = 207 (77.9 bits), Expect = 4.2e-87, Sum P(2) = 4.2e-87
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   926 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 985

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   986 NVYEELRQCVRNAPQFRFDWFI 1007

 Score = 52 (23.4 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query:   144 ATADVVVLYDSDWNPQMDLQ---AMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYG 200
             ATA +VV+ D    P +  +   A    A      + +K  E K  +  +PF QL++A  
Sbjct:    17 ATATIVVIEDEQPGPSISKEEGAAAAATASTEATVATEKG-EKKKEKNASPF-QLKLAAK 74

Query:   201 ANKGKNYTEEE 211
             A+K +   + E
Sbjct:    75 ASKSEKEMDPE 85

 Score = 39 (18.8 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   839 DGAEPLTPEETEE 851


>UNIPROTKB|F1RTI9 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
            activity" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
            GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
            OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
        Length = 1073

 Score = 691 (248.3 bits), Expect = 9.2e-87, Sum P(2) = 9.2e-87
 Identities = 136/189 (71%), Positives = 156/189 (82%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   433 ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 492

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQ------- 114
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R+       
Sbjct:   493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQIY 552

Query:   115 ----RQ-INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
                 R+ I  FN+  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  
Sbjct:   553 FRRRREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 612

Query:   170 KILRRGSIK 178
             +I ++  ++
Sbjct:   613 RIGQKKPVR 621

 Score = 244 (91.0 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
 Identities = 53/81 (65%), Positives = 60/81 (74%)

Query:   214 YLYCRLDGQTAHEDRQ-----------RQ-INDFNMEGSDIFIFMLSTRAGGLGINLATA 261
             Y YCRLDGQT HE+R+           R+ I  FN+  S  FIFMLSTRAGGLGINLA+A
Sbjct:   530 YEYCRLDGQTPHEERENGFLQIYFRRRREAIEAFNVPNSSRFIFMLSTRAGGLGINLASA 589

Query:   262 DVVVLYDSDWNPQMDLQAMVR 282
             DVV+LYDSDWNPQ+DLQAM R
Sbjct:   590 DVVILYDSDWNPQVDLQAMDR 610

 Score = 207 (77.9 bits), Expect = 9.2e-87, Sum P(2) = 9.2e-87
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   926 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 985

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   986 NVYEELRQCVRNAPQFRFDWFI 1007

 Score = 52 (23.4 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query:   144 ATADVVVLYDSDWNPQMDLQ---AMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYG 200
             ATA +VV+ D    P +  +   A    A      + +K  E K  +  +PF QL++A  
Sbjct:    17 ATATIVVIEDEQPGPSISKEEGAAAAATASTEATVATEKG-EKKKEKNASPF-QLKLAAK 74

Query:   201 ANKGKNYTEEE 211
             A+K +   + E
Sbjct:    75 ASKSEKEMDPE 85

 Score = 39 (18.8 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   839 DGAEPLTPEETEE 851


>UNIPROTKB|P28370 [details] [associations]
            symbol:SMARCA1 "Probable global transcription activator
            SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
            [GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
            "nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
            "CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
            evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
            GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
            GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
            EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
            IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
            RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
            ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
            MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
            PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
            Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
            KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
            GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
            neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
            InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
            GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
            CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
            Uniprot:P28370
        Length = 1054

 Score = 689 (247.6 bits), Expect = 1.2e-86, Sum P(2) = 1.2e-86
 Identities = 136/189 (71%), Positives = 155/189 (82%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N +GK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   430 ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 489

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR-------- 113
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R        
Sbjct:   490 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVE 549

Query:   114 ---QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
                QR+ I  FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  
Sbjct:   550 FLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 609

Query:   170 KILRRGSIK 178
             +I ++  ++
Sbjct:   610 RIGQKKPVR 618

 Score = 245 (91.3 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 54/81 (66%), Positives = 59/81 (72%)

Query:   214 YLYCRLDGQTAHEDR-----------QRQ-INDFNMEGSDIFIFMLSTRAGGLGINLATA 261
             Y YCRLDGQT HE+R           QR+ I  FN   S  FIFMLSTRAGGLGINLA+A
Sbjct:   527 YEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASA 586

Query:   262 DVVVLYDSDWNPQMDLQAMVR 282
             DVV+LYDSDWNPQ+DLQAM R
Sbjct:   587 DVVILYDSDWNPQVDLQAMDR 607

 Score = 207 (77.9 bits), Expect = 1.2e-86, Sum P(2) = 1.2e-86
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   923 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 982

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   983 NVYEELRQCVRNAPQFRFDWFI 1004

 Score = 39 (18.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   836 DGAEPLTPEETEE 848


>RGD|1561046 [details] [associations]
            symbol:Smarca1 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 1"
            species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
            renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
            evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
            "neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
            binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
            evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA;ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
            complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
            cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
            activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
            PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
            ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
        Length = 1034

 Score = 676 (243.0 bits), Expect = 2.6e-85, Sum P(2) = 2.6e-85
 Identities = 131/189 (69%), Positives = 152/189 (80%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N +GK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   410 ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 469

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR------ 115
              LDKLL ++K Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R+       
Sbjct:   470 ALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKH 529

Query:   116 ------QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREA 169
                    I  FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  
Sbjct:   530 NLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 589

Query:   170 KILRRGSIK 178
             +I ++  ++
Sbjct:   590 RIGQKKPVR 598

 Score = 241 (89.9 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
 Identities = 52/81 (64%), Positives = 57/81 (70%)

Query:   214 YLYCRLDGQTAHEDRQR------------QINDFNMEGSDIFIFMLSTRAGGLGINLATA 261
             Y YCRLDGQT HE+R+              I  FN   S  FIFMLSTRAGGLGINLA+A
Sbjct:   507 YEYCRLDGQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASA 566

Query:   262 DVVVLYDSDWNPQMDLQAMVR 282
             DVV+LYDSDWNPQ+DLQAM R
Sbjct:   567 DVVILYDSDWNPQVDLQAMDR 587

 Score = 207 (77.9 bits), Expect = 2.6e-85, Sum P(2) = 2.6e-85
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   903 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 962

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   963 NVYEELRQCVRNAPQFRFDWFI 984

 Score = 37 (18.1 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query:   133 STRAGGLGINLATADVVVLYDSDWNPQMDLQAM 165
             +T A  +  + A A +VVL D    P+ + +++
Sbjct:     6 ATEAATVAASDARATIVVLEDEQPGPKTNFKSV 38


>WB|WBGene00002169 [details] [associations]
            symbol:isw-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0016246 "RNA interference"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0040026 "positive regulation of vulval development"
            evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
            RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
            STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
            KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
            GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
            KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
            Uniprot:P41877
        Length = 1009

 Score = 681 (244.8 bits), Expect = 5.3e-84, Sum P(2) = 5.3e-84
 Identities = 127/177 (71%), Positives = 147/177 (83%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             VLMKDID++NGAGK+EK RL NILM LRKC NHPYLFDGAEPGPP+TTD+HLV NSGKMV
Sbjct:   379 VLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNSGKMV 438

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLL K K Q SRVLIFSQ +RMLD+LED+C+WR ++YCRLDG T HEDR   I  +N
Sbjct:   439 VLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYN 498

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
                S  FIFML+TRAGGLGINLATADVV++YDSDWNPQ DLQAM R  +I ++  ++
Sbjct:   499 APDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVR 555

 Score = 261 (96.9 bits), Expect = 3.2e-21, P = 3.2e-21
 Identities = 50/69 (72%), Positives = 54/69 (78%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDG T HEDR   I  +N   S  FIFML+TRAGGLGINLATADVV++YDSDWNP
Sbjct:   476 YEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNP 535

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   536 QSDLQAMDR 544

 Score = 187 (70.9 bits), Expect = 5.3e-84, Sum P(2) = 5.3e-84
 Identities = 33/50 (66%), Positives = 44/50 (88%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYC 217
             EA+I R+ ++KKAL+AK+++Y+APF QLRI+YG NKGK YTEEEDR+L C
Sbjct:   864 EARIQRKYAVKKALDAKIAKYKAPFQQLRISYGTNKGKTYTEEEDRFLVC 913


>TAIR|locus:2182978 [details] [associations]
            symbol:CHR17 "chromatin remodeling factor17" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
            [GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
            cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
            by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
            process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
            evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
            [GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=RCA]
            [GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
            proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
            process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
            [GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
            "gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
            chromosome organization" evidence=RCA] [GO:0045492 "xylan
            biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
            methylation" evidence=RCA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IGI] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
            GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
            IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
            ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
            EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
            PhylomeDB:F4JY25 Uniprot:F4JY25
        Length = 1072

 Score = 629 (226.5 bits), Expect = 2.5e-72, Sum P(2) = 2.5e-72
 Identities = 118/177 (66%), Positives = 145/177 (81%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +L KD++VVNG G  E+ RL NI MQLRKC NHPYLF GAEPGPPYTT +HLV N+GKMV
Sbjct:   441 LLQKDLEVVNGGG--ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMV 498

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLLPKLK ++SRVLIFSQMTR+LDILEDY  +RG++YCR+DG T  ++R   I  +N
Sbjct:   499 LLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYN 558

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
               GS+ F+F+LSTRAGGLGINLATADVV+LYDSDWNPQ+DLQA  R  +I ++  ++
Sbjct:   559 KPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQ 615

 Score = 252 (93.8 bits), Expect = 3.2e-20, P = 3.2e-20
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCR+DG T  ++R   I  +N  GS+ F+F+LSTRAGGLGINLATADVV+LYDSDWNP
Sbjct:   536 YQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNP 595

Query:   274 QMDLQAMVR 282
             Q+DLQA  R
Sbjct:   596 QVDLQAQDR 604

 Score = 136 (52.9 bits), Expect = 2.5e-72, Sum P(2) = 2.5e-72
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYC 217
             EA+I R+  I KA+  K+ RYR P+ +L+I YG NKGK Y EE DR++ C
Sbjct:   913 EARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMIC 962


>UNIPROTKB|G4NCV5 [details] [associations]
            symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
            ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
            GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
        Length = 1128

 Score = 654 (235.3 bits), Expect = 3.9e-72, Sum P(2) = 3.9e-72
 Identities = 126/172 (73%), Positives = 147/172 (85%)

Query:     2 VLMKDIDVVNGA-GKLE-KMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
             +L KDID VNGA GK E K RL NI+MQLRKC NHPYLF+GAEPGPPYTTDEHLV+NSGK
Sbjct:   432 ILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGK 491

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             MVVLDKLL +LKAQ SRVLIFSQM+R+LDILEDYC +R +KY R+DG TAHEDR   I++
Sbjct:   492 MVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAAIDE 551

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             +N  GS+ F+F+L+TRAGGLGINL TAD+V+L+DSDWNPQ DLQAM R  +I
Sbjct:   552 YNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRI 603

 Score = 253 (94.1 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG TAHEDR   I+++N  GS+ F+F+L+TRAGGLGINL TAD+V+L+DSDWNP
Sbjct:   531 YKYSRIDGGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNP 590

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   591 QADLQAMDR 599

 Score = 110 (43.8 bits), Expect = 3.9e-72, Sum P(2) = 3.9e-72
 Identities = 27/56 (48%), Positives = 34/56 (60%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGA---NKGKNYTEEEDRYLYCRLD 220
             E K+ +    +K L  KMS+YR P  QL+I Y     NK K YTEEEDR+L  +LD
Sbjct:   931 EEKLRKIEHQRKMLRKKMSQYRVPLQQLKINYSVSTTNK-KVYTEEEDRFLLVQLD 985


>UNIPROTKB|I3LTT5 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00680000100002 EMBL:CU695129
            Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
        Length = 778

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 135/177 (76%), Positives = 154/177 (87%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKDIDV+N AGK++KMRL NILMQLRKC NHPYLFDGAEPGPPYTTDEH+V NSGKMV
Sbjct:   433 ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMV 492

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             VLDKLL KLK Q SRVLIFSQMTR+LDILEDYC WRG++YCRLDGQT HE+R+  I  FN
Sbjct:   493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 552

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             +  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  +I ++  ++
Sbjct:   553 VPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVR 609

 Score = 274 (101.5 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
 Identities = 52/69 (75%), Positives = 58/69 (84%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCRLDGQT HE+R+  I  FN+  S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNP
Sbjct:   530 YEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNP 589

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   590 QVDLQAMDR 598

 Score = 52 (23.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
 Identities = 20/71 (28%), Positives = 33/71 (46%)

Query:   144 ATADVVVLYDSDWNPQMDLQ---AMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYG 200
             ATA +VV+ D    P +  +   A    A      + +K  E K  +  +PF QL++A  
Sbjct:    17 ATATIVVIEDEQPGPSISKEEGAAAAATASTEATVATEKG-EKKKEKNASPF-QLKLAAK 74

Query:   201 ANKGKNYTEEE 211
             A+K +   + E
Sbjct:    75 ASKSEKEMDPE 85


>SGD|S000000449 [details] [associations]
            symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
            chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
            "termination of RNA polymerase II transcription" evidence=IGI]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
            binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
            binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IGI] [GO:0070870 "heterochromatin
            maintenance involved in chromatin silencing" evidence=IGI;IMP]
            [GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
            transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
            remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0001178 "regulation of transcriptional start site
            selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
            evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
            InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
            GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
            GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
            GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
            PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
            EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
            SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
            STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
            GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
            OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
            Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
        Length = 1129

 Score = 648 (233.2 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
 Identities = 122/179 (68%), Positives = 147/179 (82%)

Query:     2 VLMKDIDVVNGAG--KLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
             +L KD+D VNG+   K  K RL NI+MQLRKC NHPYLFDGAEPGPPYTTDEHLV+N+ K
Sbjct:   444 ILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAK 503

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             + VLDKLL KLK + SRVLIFSQM+R+LDILEDYCY+R ++YCR+DG TAHEDR + I+D
Sbjct:   504 LQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDD 563

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             +N   S  F+F+L+TRAGGLGINL +ADVVVLYDSDWNPQ DLQAM R  +I ++  +K
Sbjct:   564 YNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVK 622

 Score = 262 (97.3 bits), Expect = 2.9e-21, P = 2.9e-21
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCR+DG TAHEDR + I+D+N   S  F+F+L+TRAGGLGINL +ADVVVLYDSDWNP
Sbjct:   543 YEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNP 602

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   603 QADLQAMDR 611

 Score = 91 (37.1 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAY--GANKGKNYTEEEDRYLYCRL 219
             E KI R    ++AL  K+S Y+ PF  L++ +   +N  + Y+EEEDR++   L
Sbjct:   951 EEKIKRVKMQQEALRRKLSEYKNPFFDLKLKHPPSSNNKRTYSEEEDRFILLML 1004


>SGD|S000005831 [details] [associations]
            symbol:ISW2 "ATP-dependent DNA translocase involved in
            chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
            evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
            regulation of antisense RNA transcription" evidence=IGI]
            [GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
            "CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
            transcription from RNA polymerase II promoter by pheromones"
            evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
            "chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
            translocase activity" evidence=IDA] [GO:0003697 "single-stranded
            DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
            "termination of RNA polymerase II transcription" evidence=IGI]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
            InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
            Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
            GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
            GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
            SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
            RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
            DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
            PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
            GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
            NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
            Uniprot:Q08773
        Length = 1120

 Score = 649 (233.5 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
 Identities = 121/172 (70%), Positives = 146/172 (84%)

Query:     2 VLMKDIDVVNGA-GKLE-KMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
             +L KDID VNGA GK E K RL NI+MQLRKC NHPYLF+GAEPGPPYTTDEHL+FNSGK
Sbjct:   432 LLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGK 491

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             M++LDKLL +LK + SRVLIFSQM+R+LDILEDYCY+R F+YCR+DG T+HE+R   I++
Sbjct:   492 MIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDE 551

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             +N   S+ F+F+L+TRAGGLGINL TAD V+L+DSDWNPQ DLQAM R  +I
Sbjct:   552 YNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRI 603

 Score = 245 (91.3 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 43/67 (64%), Positives = 55/67 (82%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             YCR+DG T+HE+R   I+++N   S+ F+F+L+TRAGGLGINL TAD V+L+DSDWNPQ 
Sbjct:   533 YCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQA 592

Query:   276 DLQAMVR 282
             DLQAM R
Sbjct:   593 DLQAMDR 599

 Score = 63 (27.2 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
 Identities = 19/73 (26%), Positives = 33/73 (45%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKN-YTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEG 239
             L  K+ + + P H+L I Y  N  +  Y   ED++L   ++      D+  +     +  
Sbjct:   967 LRQKIEQCKHPLHELIIQYPPNNARRTYNTLEDKFLLLAVNKYGLRADKLYEKLKQEIMM 1026

Query:   240 SDIFIF--MLSTR 250
             SD+F F   + TR
Sbjct:  1027 SDLFTFDWFIKTR 1039

 Score = 51 (23.0 bits), Expect = 2.1e-65, Sum P(2) = 2.1e-65
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query:   202 NKGKNYTEEEDRYLYC-RLDGQTAHEDRQRQIND 234
             N+G +  EEE  Y      +G   HE+ +R+I +
Sbjct:   828 NEGSDAEEEEGEYKNAANTEGHKGHEELKRRIEE 861


>CGD|CAL0005422 [details] [associations]
            symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
            "chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
            growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
            evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
            [GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
            of antisense RNA transcription" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
            silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IEA] [GO:0046020 "negative
            regulation of transcription from RNA polymerase II promoter by
            pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
            telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
            evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
            GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
            ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
            KEGG:cal:CaO19.7401 Uniprot:Q5A310
        Length = 1056

 Score = 660 (237.4 bits), Expect = 4.1e-64, P = 4.1e-64
 Identities = 133/217 (61%), Positives = 162/217 (74%)

Query:     2 VLMKDIDVVNGA-GKLE-KMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
             +L KDID VNG  GK E K RL NI+MQLRKC NHPYLFDGAEPGPPYTTDEHLV+NSGK
Sbjct:   395 LLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSGK 454

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             M++LDK+L K KA+ SRVLIFSQM+R+LDILEDYCY+R ++YCR+DG T+HEDR   I++
Sbjct:   455 MIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDE 514

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK- 178
             +N   S+ FIF+L+TRAGGLGINL +AD+V+LYDSDWNPQ DLQAM R  +I ++  +K 
Sbjct:   515 YNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKV 574

Query:   179 ------KALEAKMSRYRAP---FHQLRIAYGANKGKN 206
                   KA+E K+    A      QL I  G     N
Sbjct:   575 FRFVTEKAIEEKVLERAAQKLRLDQLVIQQGRQMNSN 611

 Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCR+DG T+HEDR   I+++N   S+ FIF+L+TRAGGLGINL +AD+V+LYDSDWNP
Sbjct:   494 YEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNP 553

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   554 QADLQAMDR 562


>UNIPROTKB|Q5A310 [details] [associations]
            symbol:ISW2 "Putative uncharacterized protein ISW2"
            species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
            formation" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
            [GO:0071280 "cellular response to copper ion" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
            GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
            GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
            ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
            KEGG:cal:CaO19.7401 Uniprot:Q5A310
        Length = 1056

 Score = 660 (237.4 bits), Expect = 4.1e-64, P = 4.1e-64
 Identities = 133/217 (61%), Positives = 162/217 (74%)

Query:     2 VLMKDIDVVNGA-GKLE-KMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
             +L KDID VNG  GK E K RL NI+MQLRKC NHPYLFDGAEPGPPYTTDEHLV+NSGK
Sbjct:   395 LLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSGK 454

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             M++LDK+L K KA+ SRVLIFSQM+R+LDILEDYCY+R ++YCR+DG T+HEDR   I++
Sbjct:   455 MIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDE 514

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK- 178
             +N   S+ FIF+L+TRAGGLGINL +AD+V+LYDSDWNPQ DLQAM R  +I ++  +K 
Sbjct:   515 YNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKV 574

Query:   179 ------KALEAKMSRYRAP---FHQLRIAYGANKGKN 206
                   KA+E K+    A      QL I  G     N
Sbjct:   575 FRFVTEKAIEEKVLERAAQKLRLDQLVIQQGRQMNSN 611

 Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y YCR+DG T+HEDR   I+++N   S+ FIF+L+TRAGGLGINL +AD+V+LYDSDWNP
Sbjct:   494 YEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNP 553

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   554 QADLQAMDR 562


>DICTYBASE|DDB_G0292948 [details] [associations]
            symbol:isw "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
            complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
            GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
            GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
            GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
            RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
            PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
            KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
            ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
        Length = 1221

 Score = 547 (197.6 bits), Expect = 8.4e-61, Sum P(2) = 8.4e-61
 Identities = 111/172 (64%), Positives = 132/172 (76%)

Query:     2 VLMKDID-VVNGA-GKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
             +L KD+D VV GA G   ++RL NI MQLRK  NHPYLFDGAE   PYTT EHL+ NSGK
Sbjct:   524 LLSKDLDAVVVGAKGNTGRVRLLNICMQLRKACNHPYLFDGAEE-EPYTTGEHLIDNSGK 582

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             M +LDKLL KLK + SRVLIFSQM+RMLDILEDY  +RG+KY R+DG T    R+  I +
Sbjct:   583 MALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRENSIEN 642

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             +N  GSD+F F+L+TRAGGLGI L TAD+V+L+DSDWNPQMDLQA  R  +I
Sbjct:   643 YNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRI 694

 Score = 228 (85.3 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 42/69 (60%), Positives = 52/69 (75%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG T    R+  I ++N  GSD+F F+L+TRAGGLGI L TAD+V+L+DSDWNP
Sbjct:   622 YKYARIDGSTESIVRENSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNP 681

Query:   274 QMDLQAMVR 282
             QMDLQA  R
Sbjct:   682 QMDLQAQDR 690

 Score = 115 (45.5 bits), Expect = 8.4e-61, Sum P(2) = 8.4e-61
 Identities = 28/80 (35%), Positives = 45/80 (56%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYC---RLDGQTA 224
             E +I++    + +L  K+++Y+ P+ +L+I YG  K KNY +EED +L C   RL G  A
Sbjct:   996 EERIMKYKETQDSLNYKINKYKNPWIELKIQYGLKKNKNYNDEEDIFLVCMCHRL-GYGA 1054

Query:   225 HEDRQRQINDFNMEGSDIFI 244
              E+ + +I        D FI
Sbjct:  1055 FEELKEEIRKSPQFRFDWFI 1074

 Score = 37 (18.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query:    15 KLEKMRLQNILMQLRK 30
             +LEK RL+ I  Q RK
Sbjct:   135 RLEKERLKQIREQQRK 150


>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
            symbol:PF11_0053 "PfSNF2L" species:5833
            "Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
            EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
            ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
            EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
            EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
            ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
        Length = 1426

 Score = 543 (196.2 bits), Expect = 4.4e-51, P = 4.4e-51
 Identities = 104/170 (61%), Positives = 131/170 (77%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +L K+IDV+N A    K ++ NILMQLRKC NHPYLFDG E  PPY    HL+  SGKM 
Sbjct:   572 ILSKNIDVLN-AMTGSKNQMLNILMQLRKCCNHPYLFDGIEE-PPYIEGNHLIETSGKMS 629

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLLP+LK + SRVL+FSQMTR+LDI++DYC W+ + Y R+DG T  ++RQ +IN FN
Sbjct:   630 LLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFN 689

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  FIF+LSTRAGG+GINL TAD+V+L+DSD+NPQMD+QAM R  +I
Sbjct:   690 EPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRI 739

 Score = 235 (87.8 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
 Identities = 44/69 (63%), Positives = 55/69 (79%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG T  ++RQ +IN FN   S  FIF+LSTRAGG+GINL TAD+V+L+DSD+NP
Sbjct:   667 YPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNP 726

Query:   274 QMDLQAMVR 282
             QMD+QAM R
Sbjct:   727 QMDIQAMDR 735

 Score = 44 (20.5 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
 Identities = 19/77 (24%), Positives = 36/77 (46%)

Query:    81 SQMTRMLDILEDYCY-WRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             S +    + ++ +C   + FKY        ++D+++++N  N+  SD F  +L+T     
Sbjct:   381 STLDNWYEEIKKWCTPMKAFKYY------GNKDQRKELNR-NLLHSD-FDVLLTT----- 427

Query:   140 GINLATADVVVLYDSDW 156
                +   D   LYD DW
Sbjct:   428 -YEIVIKDKSALYDIDW 443


>UNIPROTKB|Q8IIW0 [details] [associations]
            symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
            falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
            EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
            ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
            EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
            EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
            ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
        Length = 1426

 Score = 543 (196.2 bits), Expect = 4.4e-51, P = 4.4e-51
 Identities = 104/170 (61%), Positives = 131/170 (77%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +L K+IDV+N A    K ++ NILMQLRKC NHPYLFDG E  PPY    HL+  SGKM 
Sbjct:   572 ILSKNIDVLN-AMTGSKNQMLNILMQLRKCCNHPYLFDGIEE-PPYIEGNHLIETSGKMS 629

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLLP+LK + SRVL+FSQMTR+LDI++DYC W+ + Y R+DG T  ++RQ +IN FN
Sbjct:   630 LLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFN 689

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
                S  FIF+LSTRAGG+GINL TAD+V+L+DSD+NPQMD+QAM R  +I
Sbjct:   690 EPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRI 739

 Score = 235 (87.8 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
 Identities = 44/69 (63%), Positives = 55/69 (79%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG T  ++RQ +IN FN   S  FIF+LSTRAGG+GINL TAD+V+L+DSD+NP
Sbjct:   667 YPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNP 726

Query:   274 QMDLQAMVR 282
             QMD+QAM R
Sbjct:   727 QMDIQAMDR 735

 Score = 44 (20.5 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
 Identities = 19/77 (24%), Positives = 36/77 (46%)

Query:    81 SQMTRMLDILEDYCY-WRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             S +    + ++ +C   + FKY        ++D+++++N  N+  SD F  +L+T     
Sbjct:   381 STLDNWYEEIKKWCTPMKAFKYY------GNKDQRKELNR-NLLHSD-FDVLLTT----- 427

Query:   140 GINLATADVVVLYDSDW 156
                +   D   LYD DW
Sbjct:   428 -YEIVIKDKSALYDIDW 443


>UNIPROTKB|E1BCV0 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
            OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
            GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
            EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
            Uniprot:E1BCV0
        Length = 816

 Score = 461 (167.3 bits), Expect = 6.0e-43, P = 6.0e-43
 Identities = 86/151 (56%), Positives = 115/151 (76%)

Query:    19 MRLQNILMQLRKCSNHPYLFD-GAEP-GPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             ++LQNI+M LRKC NHPYL +   +P    +  DE LV NSGK ++LD++LP+LK +  +
Sbjct:   536 LKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKVDEELVTNSGKFLILDRMLPELKTRGHK 595

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRA 136
             VL+FSQMTRMLDIL DYC++R F + RLDG  ++ +R++ I+ FN +  D+FIF++STRA
Sbjct:   596 VLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTD-PDVFIFLVSTRA 654

Query:   137 GGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             GGLGINL  AD V++YDSDWNPQ DLQA  R
Sbjct:   655 GGLGINLTAADTVIIYDSDWNPQSDLQAQDR 685

 Score = 217 (81.4 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 39/67 (58%), Positives = 52/67 (77%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             + RLDG  ++ +R++ I+ FN +  D+FIF++STRAGGLGINL  AD V++YDSDWNPQ 
Sbjct:   620 FSRLDGSMSYSEREKNIHSFNTD-PDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQS 678

Query:   276 DLQAMVR 282
             DLQA  R
Sbjct:   679 DLQAQDR 685


>UNIPROTKB|E2QW28 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
            GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
            Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
        Length = 839

 Score = 461 (167.3 bits), Expect = 6.7e-43, P = 6.7e-43
 Identities = 86/151 (56%), Positives = 116/151 (76%)

Query:    19 MRLQNILMQLRKCSNHPYLFD-GAEP-GPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             ++LQNI+M LRKC NHPYL +   +P    +  DE LV NSGK ++LD++LP+LKA+  +
Sbjct:   559 LKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHK 618

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRA 136
             VL+FSQMTRMLDIL DYC++R F + RLDG  ++ +R++ ++ FN +  D+FIF++STRA
Sbjct:   619 VLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTD-PDVFIFLVSTRA 677

Query:   137 GGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             GGLGINL  AD V++YDSDWNPQ DLQA  R
Sbjct:   678 GGLGINLTAADTVIIYDSDWNPQSDLQAQDR 708

 Score = 214 (80.4 bits), Expect = 2.5e-16, P = 2.5e-16
 Identities = 38/67 (56%), Positives = 52/67 (77%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             + RLDG  ++ +R++ ++ FN +  D+FIF++STRAGGLGINL  AD V++YDSDWNPQ 
Sbjct:   643 FSRLDGSMSYSEREKNMHSFNTD-PDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQS 701

Query:   276 DLQAMVR 282
             DLQA  R
Sbjct:   702 DLQAQDR 708


>UNIPROTKB|F1P5V4 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
            heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
            chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
            methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
            assembly" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
            proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
            GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
            EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
            Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
        Length = 839

 Score = 456 (165.6 bits), Expect = 2.3e-42, P = 2.3e-42
 Identities = 86/151 (56%), Positives = 114/151 (75%)

Query:    19 MRLQNILMQLRKCSNHPYLFD-GAEPGPP-YTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             ++LQNI+M LRKC NHPYL +   +P    +  DE LV NSGK ++LD++LP+LK +  +
Sbjct:   558 LKLQNIMMLLRKCCNHPYLIEYPLDPATQQFKVDEDLVKNSGKFLLLDRMLPELKKRGHK 617

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRA 136
             VL+FSQMT MLDIL DYCY RGFK+ RLDG  ++ DR+  ++ FN +  ++F+F++STRA
Sbjct:   618 VLMFSQMTMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNND-PEVFLFLVSTRA 676

Query:   137 GGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             GGLGINL  AD V++YDSDWNPQ DLQA  R
Sbjct:   677 GGLGINLTAADTVIIYDSDWNPQSDLQAQDR 707

 Score = 210 (79.0 bits), Expect = 2.1e-15, P = 2.1e-15
 Identities = 37/69 (53%), Positives = 52/69 (75%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + + RLDG  ++ DR+  ++ FN +  ++F+F++STRAGGLGINL  AD V++YDSDWNP
Sbjct:   640 FKFSRLDGSMSYSDREENMHQFNND-PEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNP 698

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   699 QSDLQAQDR 707


>UNIPROTKB|F1SC64 [details] [associations]
            symbol:HELLS "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
            development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
            OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
            GeneTree:ENSGT00550000075106 EMBL:CU468514
            Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
        Length = 838

 Score = 455 (165.2 bits), Expect = 3.0e-42, P = 3.0e-42
 Identities = 85/151 (56%), Positives = 115/151 (76%)

Query:    19 MRLQNILMQLRKCSNHPYLFD-GAEP-GPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             ++LQNI+M LRKC NHPYL +   +P    +  DE LV NSGK ++LD++LP+LK +  +
Sbjct:   558 LKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKIRGHK 617

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRA 136
             VL+FSQMTRMLDIL DYC++R F + RLDG  ++ +R++ ++ FN +  D+FIF++STRA
Sbjct:   618 VLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTD-PDVFIFLVSTRA 676

Query:   137 GGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             GGLGINL  AD V++YDSDWNPQ DLQA  R
Sbjct:   677 GGLGINLTAADTVIIYDSDWNPQSDLQAQDR 707

 Score = 213 (80.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 38/67 (56%), Positives = 52/67 (77%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             + RLDG  ++ +R++ ++ FN +  D+FIF++STRAGGLGINL  AD V++YDSDWNPQ 
Sbjct:   642 FSRLDGSMSYTEREKNMHSFNTD-PDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQS 700

Query:   276 DLQAMVR 282
             DLQA  R
Sbjct:   701 DLQAQDR 707

 Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 10/52 (19%), Positives = 24/52 (46%)

Query:    65 KLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             K+L K +    R  +  +  R+  +LE    +  F   +++ Q   E ++++
Sbjct:    47 KMLEKARMSWDRESVDIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKE 98


>UNIPROTKB|J9NZH0 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
            GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
            Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
        Length = 850

 Score = 278 (102.9 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
 Identities = 68/171 (39%), Positives = 95/171 (55%)

Query:    11 NGAGKLEKMRLQNILMQLR--KCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLP 68
             N + K  K+ + N++M LR  KC    +     +  P   +  H+V    KM +   +  
Sbjct:   231 NNSNKNHKLDILNVIMLLREAKCCGASFCLPSLDLLPSTLSISHIVLF--KMTLFPGMKM 288

Query:    69 KLKAQESRVLIFSQMT-RMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDI 127
              L+ Q+SR  + S      L  L DY +W  + Y  + GQ     ++  I  FN   S  
Sbjct:   289 ILR-QKSRCFLTSDSQFAFLSALPDYEHWPSYFYRSISGQYLFVYKKEAIEAFNAPNSSK 347

Query:   128 FIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  +I ++  ++
Sbjct:   348 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVR 398

 Score = 217 (81.4 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 44/69 (63%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y  + GQ     ++  I  FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNP
Sbjct:   319 YFYRSISGQYLFVYKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNP 378

Query:   274 QMDLQAMVR 282
             Q+DLQAM R
Sbjct:   379 QVDLQAMDR 387

 Score = 207 (77.9 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   703 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 762

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   763 NVYEELRQCVRNAPQFRFDWFI 784

 Score = 39 (18.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   616 DGAEPLTPEETEE 628


>UNIPROTKB|B5MDZ7 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 EMBL:AL356378 GO:GO:0003676 GO:GO:0004386
            InterPro:IPR002589 PROSITE:PS51154 HGNC:HGNC:1916 ChiTaRS:CHD1L
            IPI:IPI00400835 ProteinModelPortal:B5MDZ7 SMR:B5MDZ7 STRING:B5MDZ7
            PRIDE:B5MDZ7 Ensembl:ENST00000361293 HOGENOM:HOG000074191
            HOVERGEN:HBG104833 ArrayExpress:B5MDZ7 Bgee:B5MDZ7 Uniprot:B5MDZ7
        Length = 616

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 92/177 (51%), Positives = 121/177 (68%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKD+D        +K++LQNIL QLRKC +HPYLFDG EP  P+   +HL   SGK+ 
Sbjct:    12 ILMKDLDAFENE-TAKKVKLQNILSQLRKCVDHPYLFDGVEP-EPFEVGDHLTEASGKLH 69

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLL  L +   RVL+FSQMT+MLDIL+DY  +RG+ Y R+DG    E+R   I +F 
Sbjct:    70 LLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG 129

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   130 QQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 184

 Score = 178 (67.7 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 36/69 (52%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NP
Sbjct:   107 YSYERVDGSVRGEERHLAIKNFGQQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNP 164

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   165 QNDLQAAAR 173


>UNIPROTKB|Q3B7N1 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
            process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
            remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
            GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
            GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
            UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
            GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
            HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
            NextBio:20874039 Uniprot:Q3B7N1
        Length = 897

 Score = 449 (163.1 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 91/177 (51%), Positives = 123/177 (69%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKD+D        +K++LQN+L QLRKC +HPYLFDG EP  P+   +HL+  SGK+ 
Sbjct:   295 ILMKDLDAFENE-TAKKVKLQNVLSQLRKCVDHPYLFDGVEP-EPFEIGDHLIEASGKLH 352

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLL  L ++  RVL+FSQMT+MLDIL+DY  +RG+ Y R+DG    E+R   I +F 
Sbjct:   353 LLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFG 412

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +   IF F+LSTRAGG+G+NL  AD V+ +DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   413 QQ--PIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVK 467

 Score = 178 (67.7 bits), Expect = 9.2e-11, P = 9.2e-11
 Identities = 36/69 (52%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   IF F+LSTRAGG+G+NL  AD V+ +DSD+NP
Sbjct:   390 YSYERVDGSVRGEERHLAIKNFGQQ--PIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNP 447

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   448 QNDLQAAAR 456


>TAIR|locus:2041644 [details] [associations]
            symbol:CHR5 "chromatin remodeling 5" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
            activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
            IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
            EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
            OMA:ARNTKSY Uniprot:F4IV99
        Length = 1724

 Score = 435 (158.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
 Identities = 91/177 (51%), Positives = 124/177 (70%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-------EHLV 54
             +L ++   +N   +  ++ L NI+++L+KC NHP+LF+ A+ G  Y  D       + ++
Sbjct:   878 ILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHG--YGGDINDNSKLDKII 935

Query:    55 FNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQ 114
              +SGK+V+LDKLL +L+  + RVLIFSQM RMLDIL +Y   RGF++ RLDG T  E RQ
Sbjct:   936 LSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQ 995

Query:   115 RQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             + ++ FN   SD F F+LSTRAGGLGINLATAD VV++DSDWNPQ DLQAM R  +I
Sbjct:   996 QAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRI 1052

 Score = 226 (84.6 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
 Identities = 45/69 (65%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + + RLDG T  E RQ+ ++ FN   SD F F+LSTRAGGLGINLATAD VV++DSDWNP
Sbjct:   980 FQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNP 1039

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:  1040 QNDLQAMSR 1048

 Score = 49 (22.3 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query:   158 PQMDLQAM-VREAKILRRGSIKKALEAKMSRYRAPFHQLRI 197
             P +D   + V+  ++L+R    + L  ++SRY  P  Q R+
Sbjct:  1333 PVLDFFGVPVKANELLKRVQGLQLLSKRISRYNDPISQFRV 1373

 Score = 48 (22.0 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
 Identities = 17/56 (30%), Positives = 30/56 (53%)

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGI-----NLATADVVV--LYDS--DWN 157
             ++R+ Q +D   E +D+   +L  +  G+G      N +T  V+V  L+D+  DWN
Sbjct:   405 KNRKNQKDDIEEEDADVIEKVLWHQLKGMGEDVQTNNKSTVPVLVSQLFDTEPDWN 460


>RGD|1309820 [details] [associations]
            symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
            norvegicus" [GO:0000775 "chromosome, centromeric region"
            evidence=ISO] [GO:0001655 "urogenital system development"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
            evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
            [GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=ISO]
            [GO:0007275 "multicellular organismal development" evidence=ISO]
            [GO:0010216 "maintenance of DNA methylation" evidence=ISO]
            [GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
            GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
            PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
            GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
            Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
        Length = 494

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 86/164 (52%), Positives = 117/164 (71%)

Query:     9 VVNGAGKLEK---MRLQNILMQLRKCSNHPYLFD-GAEP-GPPYTTDEHLVFNSGKMVVL 63
             VV G   +E    ++LQNI+M LRKC NHPY+ +   +P    +  DE LV NSGK ++L
Sbjct:   201 VVEGNIPIESEVNLKLQNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLIL 260

Query:    64 DKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNME 123
             D++LP+LK +  +VL+FSQMT MLDIL DYC+ R F + RLDG  ++ +R++ I  FN +
Sbjct:   261 DRMLPELKKRCHKVLVFSQMTSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNTD 320

Query:   124 GSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
               ++F+F++STRAGGLGINL  AD V++YDSDWNPQ DLQA  R
Sbjct:   321 -PEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDR 363

 Score = 210 (79.0 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 37/69 (53%), Positives = 52/69 (75%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + + RLDG  ++ +R++ I  FN +  ++F+F++STRAGGLGINL  AD V++YDSDWNP
Sbjct:   296 FTFSRLDGSMSYSEREKNIYSFNTD-PEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNP 354

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   355 QSDLQAQDR 363


>UNIPROTKB|Q86WJ1 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
            evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
            damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
            catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
            GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
            CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
            EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
            EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
            EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
            IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
            RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
            RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
            ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
            STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
            PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
            Ensembl:ENST00000431239 Ensembl:ENST00000579763
            Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
            KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
            UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
            H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
            MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
            OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
            NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
            Genevestigator:Q86WJ1 Uniprot:Q86WJ1
        Length = 897

 Score = 445 (161.7 bits), Expect = 4.5e-41, P = 4.5e-41
 Identities = 92/177 (51%), Positives = 121/177 (68%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKD+D        +K++LQNIL QLRKC +HPYLFDG EP  P+   +HL   SGK+ 
Sbjct:   293 ILMKDLDAFENE-TAKKVKLQNILSQLRKCVDHPYLFDGVEP-EPFEVGDHLTEASGKLH 350

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLL  L +   RVL+FSQMT+MLDIL+DY  +RG+ Y R+DG    E+R   I +F 
Sbjct:   351 LLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG 410

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   411 QQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 465

 Score = 178 (67.7 bits), Expect = 9.2e-11, P = 9.2e-11
 Identities = 36/69 (52%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NP
Sbjct:   388 YSYERVDGSVRGEERHLAIKNFGQQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNP 445

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   446 QNDLQAAAR 454


>MGI|MGI:1915308 [details] [associations]
            symbol:Chd1l "chromodomain helicase DNA binding protein
            1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
            catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
            GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
            HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
            EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
            EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
            UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
            DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
            PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
            UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
            InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
            Uniprot:Q9CXF7
        Length = 900

 Score = 445 (161.7 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 92/177 (51%), Positives = 121/177 (68%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKD+D        +K++LQNIL QLRKC +HPYLFDG EP  P+   EHL+  SGK+ 
Sbjct:   287 ILMKDLDAFENE-TAKKVKLQNILTQLRKCVDHPYLFDGVEP-EPFEVGEHLIEASGKLH 344

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LD+LL  L +   RVL+FSQMT MLDIL+DY  +RG+ Y R+DG    E+R   I +F 
Sbjct:   345 LLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG 404

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   405 NQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 459

 Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 36/69 (52%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NP
Sbjct:   382 YSYERVDGSVRGEERHLAIKNFGNQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNP 439

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   440 QNDLQAAAR 448


>RGD|1311935 [details] [associations]
            symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
            evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
            "response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
            activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
            GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
            IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
            ArrayExpress:D4ACG6 Uniprot:D4ACG6
        Length = 903

 Score = 445 (161.7 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 91/177 (51%), Positives = 121/177 (68%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKD+D        +K++LQN+L QLRKC +HPYLFDG EP  P+   EHL+  SGK+ 
Sbjct:   287 ILMKDLDAFENE-TAKKVKLQNVLTQLRKCVDHPYLFDGVEP-EPFEVGEHLIEASGKLH 344

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LD+LL  L +   RVL+FSQMT MLDIL+DY  +RG+ Y R+DG    E+R   I +F 
Sbjct:   345 LLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG 404

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   405 KQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 459

 Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 36/69 (52%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NP
Sbjct:   382 YSYERVDGSVRGEERHLAIKNFGKQ--PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNP 439

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   440 QNDLQAAAR 448


>UNIPROTKB|F1SDB8 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
            GeneTree:ENSGT00670000098110 EMBL:CU462855
            Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
        Length = 905

 Score = 445 (161.7 bits), Expect = 4.7e-41, P = 4.7e-41
 Identities = 91/179 (50%), Positives = 125/179 (69%)

Query:     2 VLMKDIDVVNGAGK--LEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGK 59
             +LMKD+++ +       +K++LQN+L QLRKC +HPYLFDG EP  P+   +HL+  SGK
Sbjct:   295 ILMKDLEISDAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEP-EPFEIGDHLIEASGK 353

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             + +LDKLL  L ++  RVL+FSQMT+MLDIL+DY  +RG+ Y R+DG    E+R   I +
Sbjct:   354 LHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKN 413

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             F  +   IFIF+LSTRAGG+G+NL  AD V+  DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   414 FGQQ--PIFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 470

 Score = 179 (68.1 bits), Expect = 7.1e-11, P = 7.1e-11
 Identities = 37/69 (53%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   IFIF+LSTRAGG+G+NL  AD V+  DSD+NP
Sbjct:   393 YSYERVDGSVRGEERHLAIKNFGQQ--PIFIFLLSTRAGGVGMNLTAADTVIFVDSDFNP 450

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   451 QNDLQAAAR 459


>UNIPROTKB|Q9NRZ9 [details] [associations]
            symbol:HELLS "Lymphoid-specific helicase" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
            division" evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
            "centromeric heterochromatin" evidence=ISS] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=ISS]
            [GO:0007275 "multicellular organismal development" evidence=ISS]
            [GO:0010216 "maintenance of DNA methylation" evidence=ISS]
            [GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
            [GO:0000775 "chromosome, centromeric region" evidence=ISS]
            [GO:0046651 "lymphocyte proliferation" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
            EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
            GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
            GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
            EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
            EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
            EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
            EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
            IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
            IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
            IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
            ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
            PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
            DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
            Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
            KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
            CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
            HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
            HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
            GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
            Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
        Length = 838

 Score = 442 (160.7 bits), Expect = 7.7e-41, P = 7.7e-41
 Identities = 83/151 (54%), Positives = 113/151 (74%)

Query:    19 MRLQNILMQLRKCSNHPYLFD-GAEP-GPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             ++LQNI+M LRKC NHPYL +   +P    +  DE LV NSGK ++LD++LP+LK +  +
Sbjct:   558 LKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHK 617

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRA 136
             VL+FSQMT MLDIL DYC+ R F + RLDG  ++ +R++ ++ FN +  ++FIF++STRA
Sbjct:   618 VLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTD-PEVFIFLVSTRA 676

Query:   137 GGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             GGLGINL  AD V++YDSDWNPQ DLQA  R
Sbjct:   677 GGLGINLTAADTVIIYDSDWNPQSDLQAQDR 707

 Score = 211 (79.3 bits), Expect = 5.3e-16, P = 5.3e-16
 Identities = 39/77 (50%), Positives = 56/77 (72%)

Query:   206 NYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVV 265
             +Y    D + + RLDG  ++ +R++ ++ FN +  ++FIF++STRAGGLGINL  AD V+
Sbjct:   633 DYCHLRD-FNFSRLDGSMSYSEREKNMHSFNTD-PEVFIFLVSTRAGGLGINLTAADTVI 690

Query:   266 LYDSDWNPQMDLQAMVR 282
             +YDSDWNPQ DLQA  R
Sbjct:   691 IYDSDWNPQSDLQAQDR 707


>MGI|MGI:106209 [details] [associations]
            symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000775 "chromosome, centromeric region" evidence=IDA]
            [GO:0001655 "urogenital system development" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005721 "centromeric heterochromatin"
            evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
            [GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
            "mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IMP] [GO:0010216 "maintenance of DNA
            methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0030098 "lymphocyte differentiation"
            evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
            GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
            GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
            GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
            GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
            OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
            EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
            IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
            UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
            SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
            STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
            DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
            UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
            NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
            GermOnline:ENSMUSG00000025001 Uniprot:Q60848
        Length = 821

 Score = 438 (159.2 bits), Expect = 1.9e-40, P = 1.9e-40
 Identities = 86/164 (52%), Positives = 117/164 (71%)

Query:     9 VVNGAGKLEK---MRLQNILMQLRKCSNHPYLFD-GAEP-GPPYTTDEHLVFNSGKMVVL 63
             VV G   +E    ++L+NI+M LRKC NHPY+ +   +P    +  DE LV NSGK ++L
Sbjct:   528 VVEGNIPIESEVNLKLRNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLIL 587

Query:    64 DKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNME 123
             D++LP+LK +  +VL+FSQMT MLDIL DYC+ R F + RLDG  ++ +R++ I  FN +
Sbjct:   588 DRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTD 647

Query:   124 GSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
               D+F+F++STRAGGLGINL  AD V++YDSDWNPQ DLQA  R
Sbjct:   648 -PDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDR 690

 Score = 217 (81.4 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 38/69 (55%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             +++ RLDG  ++ +R++ I  FN +  D+F+F++STRAGGLGINL  AD V++YDSDWNP
Sbjct:   623 FIFSRLDGSMSYSEREKNIYSFNTD-PDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNP 681

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   682 QSDLQAQDR 690


>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
            symbol:hells "helicase, lymphoid-specific"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
            GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
            EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
            UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
            GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
            ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
        Length = 853

 Score = 423 (154.0 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
 Identities = 81/151 (53%), Positives = 111/151 (73%)

Query:    19 MRLQNILMQLRKCSNHPYLFD-GAEPGP-PYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             ++LQNILM L++C NH YL +   +P    +  DE LV  SGK ++LD++LP+LK +  +
Sbjct:   574 LKLQNILMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHK 633

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRA 136
             VLIFSQMT +LDIL DYCY RG++Y RLDG  ++ DR   +  F+ +  ++F+F+LSTRA
Sbjct:   634 VLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSD-PEVFLFLLSTRA 692

Query:   137 GGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             GGLGINL +AD V+++DSDWNPQ DLQA  R
Sbjct:   693 GGLGINLTSADTVIIFDSDWNPQADLQAQDR 723

 Score = 208 (78.3 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 38/69 (55%), Positives = 51/69 (73%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDG  ++ DR   +  F+ +  ++F+F+LSTRAGGLGINL +AD V+++DSDWNP
Sbjct:   656 YEYSRLDGSMSYADRDENMKKFSSD-PEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNP 714

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   715 QADLQAQDR 723

 Score = 40 (19.1 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPF 192
             + KIL R S K+ LE KM  ++  F
Sbjct:   745 DEKILERASAKRKLE-KMVIHKNKF 768


>UNIPROTKB|F1MFS2 [details] [associations]
            symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
            1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
            GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
            OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
            Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
        Length = 896

 Score = 438 (159.2 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 91/177 (51%), Positives = 122/177 (68%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LMKD+D        +K++LQN+L QLRKC +HPYLFDG EP  P+   +HL+  SGK+ 
Sbjct:   295 ILMKDLDAFENE-MAKKVKLQNVLSQLRKCVDHPYLFDGVEP-EPFEIGDHLIEASGKLH 352

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLL  L ++  RVL+FSQMT+MLDIL+DY  +RG+ Y R+DG    E+R   I +F 
Sbjct:   353 LLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFG 412

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +   IF F LSTRAGG+G+NL  AD V+ +DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   413 QQ--PIFTF-LSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVK 466

 Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 36/69 (52%), Positives = 45/69 (65%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   IF F LSTRAGG+G+NL  AD V+ +DSD+NP
Sbjct:   390 YSYERVDGSVRGEERHLAIKNFGQQ--PIFTF-LSTRAGGVGMNLTAADTVIFFDSDFNP 446

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   447 QNDLQAAAR 455


>ZFIN|ZDB-GENE-040426-892 [details] [associations]
            symbol:chd1l "chromodomain helicase DNA binding
            protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
            [GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
            "ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
            ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
            GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
            HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
            HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
            EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
            ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
            KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
            ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
        Length = 1026

 Score = 438 (159.2 bits), Expect = 3.7e-40, P = 3.7e-40
 Identities = 90/177 (50%), Positives = 119/177 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +LM+D+D      +  K RL N+LMQLRKC +HPYLFDG EP  P+   EHLV  SGK+ 
Sbjct:   282 ILMRDLDAFR-TDQSTKTRLLNVLMQLRKCVDHPYLFDGVEP-EPFEMGEHLVEASGKLS 339

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LD +L  L+     VL+FSQMTRMLDIL+DY  +RG+ Y RLDG    E+R   I +F+
Sbjct:   340 LLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFS 399

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +  D+FIF+LST+AGG+G+NL  AD V+  D D+NPQ DLQA  R  +I +   +K
Sbjct:   400 TK--DVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVK 454

 Score = 181 (68.8 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 38/78 (48%), Positives = 51/78 (65%)

Query:   205 KNYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVV 264
             ++Y E    Y Y RLDG    E+R   I +F+ +  D+FIF+LST+AGG+G+NL  AD V
Sbjct:   369 QDYLEYRG-YSYERLDGSVRGEERNLAIKNFSTK--DVFIFLLSTKAGGVGMNLTAADTV 425

Query:   265 VLYDSDWNPQMDLQAMVR 282
             +  D D+NPQ DLQA  R
Sbjct:   426 IFVDGDFNPQNDLQAAAR 443


>POMBASE|SPAC1783.05 [details] [associations]
            symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
            region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
            DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=IMP] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
            condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=IDA] [GO:0016592 "mediator complex"
            evidence=IPI] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0035067 "negative
            regulation of histone acetylation" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
            of transcription" evidence=TAS] [GO:0060303 "regulation of
            nucleosome density" evidence=IMP] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
            GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
            GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
            HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
            PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
            MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
            GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
            GO:GO:0060303 Uniprot:Q9US25
        Length = 1373

 Score = 411 (149.7 bits), Expect = 3.8e-40, Sum P(2) = 3.8e-40
 Identities = 91/174 (52%), Positives = 116/174 (66%)

Query:    11 NGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP----GPPYTTDEHL---VFNSGKMVVL 63
             +G G+L    L NI+++L+K SNHPYLF GA      G   T ++ L   + NSGKMV+L
Sbjct:   653 DGRGQLS---LLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLL 709

Query:    64 DKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNME 123
             DKLL +LK    RVLIFSQM RML+IL +Y   RG+ Y RLDG      R+  I+ FN  
Sbjct:   710 DKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAP 769

Query:   124 GSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
              S  F+F+LSTRAGGLGINL TAD V+++DSDWNPQ DLQAM R  +I ++  +
Sbjct:   770 DSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 823

 Score = 210 (79.0 bits), Expect = 4.0e-15, P = 4.0e-15
 Identities = 42/69 (60%), Positives = 49/69 (71%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDG      R+  I+ FN   S  F+F+LSTRAGGLGINL TAD V+++DSDWNP
Sbjct:   745 YNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNP 804

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   805 QADLQAMAR 813

 Score = 59 (25.8 bits), Expect = 3.8e-40, Sum P(2) = 3.8e-40
 Identities = 20/71 (28%), Positives = 32/71 (45%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTA 224
             M+ E  I+  G  +K+  +K  +Y A      + +GA+     TE + +     LD   +
Sbjct:   846 MILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKLENMNLDDILS 905

Query:   225 H-EDRQRQIND 234
             H EDR    ND
Sbjct:   906 HAEDRDSS-ND 915


>WB|WBGene00002637 [details] [associations]
            symbol:let-418 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0048557 "embryonic digestive tract
            morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
            factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
            evidence=ISS] [GO:0040027 "negative regulation of vulval
            development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
            RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
            SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
            GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
            OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
        Length = 1829

 Score = 442 (160.7 bits), Expect = 4.0e-40, P = 4.0e-40
 Identities = 100/227 (44%), Positives = 140/227 (61%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ D +N      +M L N+LM+L+KC NHPYLF  AE   P   +       L+ N
Sbjct:   865 ILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKN 924

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK V+L K+L KLK    RVLIFSQMTRMLDI+ED C + G++Y R+DG    + RQ  
Sbjct:   925 SGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDA 984

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ +N  G+  FIF+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  ++ ++  
Sbjct:   985 IDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1044

Query:   177 I-------KKALEAKMS---RYRAPFHQL--RIAYGANKGKNYTEEE 211
             +       KK++E K++   + +   + L  R   G  +GK  ++ E
Sbjct:  1045 VMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE 1091

 Score = 215 (80.7 bits), Expect = 5.6e-16, P = 5.6e-16
 Identities = 42/73 (57%), Positives = 52/73 (71%)

Query:   210 EEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
             E + Y Y R+DG    + RQ  I+ +N  G+  FIF+LSTRAGGLGINLATAD V++YDS
Sbjct:   963 EYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDS 1022

Query:   270 DWNPQMDLQAMVR 282
             DWNP  D+QA  R
Sbjct:  1023 DWNPHNDIQAFSR 1035


>UNIPROTKB|G5EBZ4 [details] [associations]
            symbol:let-418 "Protein let-418" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
            RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
            SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
            GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
            OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
        Length = 1829

 Score = 442 (160.7 bits), Expect = 4.0e-40, P = 4.0e-40
 Identities = 100/227 (44%), Positives = 140/227 (61%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ D +N      +M L N+LM+L+KC NHPYLF  AE   P   +       L+ N
Sbjct:   865 ILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKN 924

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK V+L K+L KLK    RVLIFSQMTRMLDI+ED C + G++Y R+DG    + RQ  
Sbjct:   925 SGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDA 984

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ +N  G+  FIF+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  ++ ++  
Sbjct:   985 IDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1044

Query:   177 I-------KKALEAKMS---RYRAPFHQL--RIAYGANKGKNYTEEE 211
             +       KK++E K++   + +   + L  R   G  +GK  ++ E
Sbjct:  1045 VMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTE 1091

 Score = 215 (80.7 bits), Expect = 5.6e-16, P = 5.6e-16
 Identities = 42/73 (57%), Positives = 52/73 (71%)

Query:   210 EEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
             E + Y Y R+DG    + RQ  I+ +N  G+  FIF+LSTRAGGLGINLATAD V++YDS
Sbjct:   963 EYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDS 1022

Query:   270 DWNPQMDLQAMVR 282
             DWNP  D+QA  R
Sbjct:  1023 DWNPHNDIQAFSR 1035


>UNIPROTKB|F1NS62 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
            EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
            Ensembl:ENSGALT00000024254 Uniprot:F1NS62
        Length = 895

 Score = 435 (158.2 bits), Expect = 5.4e-40, P = 5.4e-40
 Identities = 90/177 (50%), Positives = 120/177 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMV 61
             +L KD+D   G G   K+ LQN+L+QLRKC  HPYLF+G EP  P+   +H+V  SGK+ 
Sbjct:   293 ILTKDLDAFEG-GTGRKVMLQNVLIQLRKCVAHPYLFNGVEP-EPFEIGDHIVEASGKLC 350

Query:    62 VLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             +LDKLL  L     RVL+FSQMT++LDIL+DY  +RG+ Y RLDG    E+R   I +F 
Sbjct:   351 LLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFG 410

Query:   122 MEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
              +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NPQ DLQA+ R  +I +   +K
Sbjct:   411 QQ--PIFVFLLSTRAGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVK 465

 Score = 182 (69.1 bits), Expect = 3.0e-11, P = 3.0e-11
 Identities = 37/69 (53%), Positives = 47/69 (68%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDG    E+R   I +F  +   IF+F+LSTRAGG+G+NL  AD V+  DSD+NP
Sbjct:   388 YSYERLDGSVRGEERHLAIKNFGQQ--PIFVFLLSTRAGGVGMNLTAADTVIFTDSDFNP 445

Query:   274 QMDLQAMVR 282
             Q DLQA+ R
Sbjct:   446 QNDLQAIAR 454


>CGD|CAL0001390 [details] [associations]
            symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
            complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
            "negative regulation of histone H3-K9 acetylation" evidence=IEA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
            acetylation" evidence=IEA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0006368 "transcription elongation
            from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
            of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
            process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:2000104 "negative regulation of
            DNA-dependent DNA replication" evidence=IEA] [GO:0042766
            "nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
            transcriptional start site selection at RNA polymerase II promoter"
            evidence=IEA] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
            binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
            evidence=IEA] [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
            EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
            RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
            STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
            KEGG:cal:CaO19.3035 Uniprot:Q5AI17
        Length = 1410

 Score = 433 (157.5 bits), Expect = 2.4e-39, P = 2.4e-39
 Identities = 90/184 (48%), Positives = 124/184 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP------GPPY--TTDEHL 53
             ++ K+   +N   +  ++ L NI+ +L+K SNHPYLFDGAE       G P    T + +
Sbjct:   610 IITKNYAALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGI 669

Query:    54 VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
             V +SGKMV+L++LL +L+ +  RVLIFSQM RMLDIL DY + +G+++ RLDG      R
Sbjct:   670 VMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKR 729

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILR 173
             +  I+ FN  GS  F F+LSTRAGGLGINL TAD V+++DSDWNPQ DLQAM R  +I +
Sbjct:   730 KIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQ 789

Query:   174 RGSI 177
             +  +
Sbjct:   790 KNHV 793

 Score = 214 (80.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
 Identities = 42/69 (60%), Positives = 49/69 (71%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG      R+  I+ FN  GS  F F+LSTRAGGLGINL TAD V+++DSDWNP
Sbjct:   715 YQFQRLDGTVPSSKRKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNP 774

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   775 QADLQAMAR 783

 Score = 50 (22.7 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
 Identities = 16/63 (25%), Positives = 30/63 (47%)

Query:   150 VLYDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTE 209
             + YD  +     +++  + +K  ++G   KA + K S   +P  +LR +   NK  NY  
Sbjct:    77 IYYDGSFGAGKKMKSKPKTSK-KQKGKNTKARKTKQSP--SPPQELRFSSRNNKQVNYAI 133

Query:   210 EED 212
             + D
Sbjct:   134 DYD 136


>UNIPROTKB|K7EMY3 [details] [associations]
            symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
            HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
        Length = 1060

 Score = 420 (152.9 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
 Identities = 89/185 (48%), Positives = 120/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   346 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 405

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:   406 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 465

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:   466 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 522

Query:   177 IKKAL 181
              KK +
Sbjct:   523 NKKVM 527

 Score = 211 (79.3 bits), Expect = 7.5e-16, P = 7.5e-16
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:   412 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 471

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:   472 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 516

 Score = 38 (18.4 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   208 TEEEDRYLYCRLDGQTAHEDRQRQI 232
             +E+ED     R +GQ+     +RQ+
Sbjct:   759 SEDEDEDFEERPEGQSGRRQSRRQL 783


>UNIPROTKB|Q9NW36 [details] [associations]
            symbol:HELLS "cDNA FLJ10339 fis, clone NT2RM2000740, weakly
            similar to POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0004386 EMBL:AL138759 UniGene:Hs.655830
            HGNC:HGNC:4861 ChiTaRS:HELLS EMBL:AK001201 IPI:IPI00012073
            SMR:Q9NW36 STRING:Q9NW36 Ensembl:ENST00000371327
            HOGENOM:HOG000198825 HOVERGEN:HBG072129 Uniprot:Q9NW36
        Length = 310

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 79/145 (54%), Positives = 107/145 (73%)

Query:    25 LMQLRKCSNHPYLFD-GAEP-GPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQ 82
             +M LRKC NHPYL +   +P    +  DE LV NSGK ++LD++LP+LK +  +VL+FSQ
Sbjct:     1 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 60

Query:    83 MTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGIN 142
             MT MLDIL DYC+ R F + RLDG  ++ +R++ ++ FN +  ++FIF++STRAGGLGIN
Sbjct:    61 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTD-PEVFIFLVSTRAGGLGIN 119

Query:   143 LATADVVVLYDSDWNPQMDLQAMVR 167
             L  AD V++YDSDWNPQ DLQA  R
Sbjct:   120 LTAADTVIIYDSDWNPQSDLQAQDR 144

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 39/77 (50%), Positives = 56/77 (72%)

Query:   206 NYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVV 265
             +Y    D + + RLDG  ++ +R++ ++ FN +  ++FIF++STRAGGLGINL  AD V+
Sbjct:    70 DYCHLRD-FNFSRLDGSMSYSEREKNMHSFNTD-PEVFIFLVSTRAGGLGINLTAADTVI 127

Query:   266 LYDSDWNPQMDLQAMVR 282
             +YDSDWNPQ DLQA  R
Sbjct:   128 IYDSDWNPQSDLQAQDR 144


>UNIPROTKB|F1SSZ2 [details] [associations]
            symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
        Length = 1667

 Score = 420 (152.9 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
 Identities = 89/185 (48%), Positives = 120/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   879 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 938

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:   939 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 998

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:   999 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1055

Query:   177 IKKAL 181
              KK +
Sbjct:  1056 NKKVM 1060

 Score = 211 (79.3 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:   945 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1004

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1005 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1049

 Score = 38 (18.4 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   208 TEEEDRYLYCRLDGQTAHEDRQRQI 232
             +E+ED     R +GQ+     +RQ+
Sbjct:  1255 SEDEDEDFEERPEGQSGRRQSRRQL 1279


>UNIPROTKB|F1RIM3 [details] [associations]
            symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
        Length = 1723

 Score = 420 (152.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
 Identities = 89/185 (48%), Positives = 120/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   895 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 954

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:   955 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1014

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1015 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1071

Query:   177 IKKAL 181
              KK +
Sbjct:  1072 NKKVM 1076

 Score = 211 (79.3 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:   961 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1020

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1021 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1065

 Score = 38 (18.4 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   208 TEEEDRYLYCRLDGQTAHEDRQRQI 232
             +E+ED     R +GQ+     +RQ+
Sbjct:  1308 SEDEDEDFEERPEGQSGRRQSRRQL 1332


>UNIPROTKB|E2R1M3 [details] [associations]
            symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
            Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
        Length = 1812

 Score = 420 (152.9 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
 Identities = 89/185 (48%), Positives = 120/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   826 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 885

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:   886 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 945

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:   946 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1002

Query:   177 IKKAL 181
              KK +
Sbjct:  1003 NKKVM 1007

 Score = 211 (79.3 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:   892 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 951

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:   952 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 996

 Score = 38 (18.4 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   208 TEEEDRYLYCRLDGQTAHEDRQRQI 232
             +E+ED     R +GQ+     +RQ+
Sbjct:  1239 SEDEDEDFEERPEGQSGRRQSRRQL 1263


>FB|FBgn0000212 [details] [associations]
            symbol:brm "brahma" species:7227 "Drosophila melanogaster"
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
            [GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
            "chromatin-mediated maintenance of transcription" evidence=NAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
            complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
            [GO:0045749 "negative regulation of S phase of mitotic cell cycle"
            evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0007474 "imaginal disc-derived wing vein specification"
            evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
            [GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
            "dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
            engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
            [GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
            [GO:0008586 "imaginal disc-derived wing vein morphogenesis"
            evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
            morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
            epidermal growth factor receptor signaling pathway" evidence=IMP]
            [GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
            "neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
            acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
            GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
            GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
            GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
            EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
            RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
            UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
            IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
            EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
            KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
            GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
            OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
            NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
            GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 Uniprot:P25439
        Length = 1638

 Score = 426 (155.0 bits), Expect = 1.7e-38, P = 1.7e-38
 Identities = 101/253 (39%), Positives = 140/253 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D       GK     L N ++QLRK  NHP++F   E      T  H V +     
Sbjct:  1035 VLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLY 1094

Query:    57 --SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQ 114
               SGK  +LD++LPKLKA   RVL+F QMT+ + I+EDY  WR F Y RLDG T  EDR 
Sbjct:  1095 RVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRG 1154

Query:   115 RQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRR 174
               +  FN +GSD+F+F+LSTRAGGLG+NL TAD VV++DSDWNP  DLQA  R  +I +R
Sbjct:  1155 ELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQR 1214

Query:   175 GSIK-------KALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTA 224
               ++        ++E ++   +RY+    +  I  G    K+   E  ++L   L     
Sbjct:  1215 NEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDN 1274

Query:   225 HEDRQRQINDFNM 237
              E+ + ++ D  M
Sbjct:  1275 EEEEENEVPDDEM 1287

 Score = 233 (87.1 bits), Expect = 6.0e-18, P = 6.0e-18
 Identities = 43/67 (64%), Positives = 51/67 (76%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             Y RLDG T  EDR   +  FN +GSD+F+F+LSTRAGGLG+NL TAD VV++DSDWNP  
Sbjct:  1141 YLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQ 1200

Query:   276 DLQAMVR 282
             DLQA  R
Sbjct:  1201 DLQAQDR 1207


>RGD|1582725 [details] [associations]
            symbol:Chd5 "chromodomain helicase DNA binding protein 5"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
            IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
            ArrayExpress:D4A5U0 Uniprot:D4A5U0
        Length = 1940

 Score = 420 (152.9 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
 Identities = 89/185 (48%), Positives = 120/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   961 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKS 1020

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1021 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1080

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1081 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1137

Query:   177 IKKAL 181
              KK +
Sbjct:  1138 NKKVM 1142

 Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:  1027 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1086

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1087 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1131

 Score = 38 (18.4 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   208 TEEEDRYLYCRLDGQTAHEDRQRQI 232
             +E+ED     R +GQ+     +RQ+
Sbjct:  1374 SEDEDEDFEERPEGQSGRRQSRRQL 1398


>UNIPROTKB|Q8TDI0 [details] [associations]
            symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
            GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
            HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
            EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
            PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
            ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
            PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
            DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
            UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
            HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
            InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
            ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
            Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
            GermOnline:ENSG00000116254 Uniprot:Q8TDI0
        Length = 1954

 Score = 420 (152.9 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
 Identities = 89/185 (48%), Positives = 120/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   963 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 1022

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1023 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1082

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1083 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1139

Query:   177 IKKAL 181
              KK +
Sbjct:  1140 NKKVM 1144

 Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:  1029 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1088

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1133

 Score = 38 (18.4 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   208 TEEEDRYLYCRLDGQTAHEDRQRQI 232
             +E+ED     R +GQ+     +RQ+
Sbjct:  1376 SEDEDEDFEERPEGQSGRRQSRRQL 1400


>WB|WBGene00000482 [details] [associations]
            symbol:chd-3 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
            [GO:0040027 "negative regulation of vulval development"
            evidence=IMP] [GO:0046580 "negative regulation of Ras protein
            signal transduction" evidence=IMP] [GO:0001709 "cell fate
            determination" evidence=IMP] [GO:0000118 "histone deacetylase
            complex" evidence=ISS] [GO:0003682 "chromatin binding"
            evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
            EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
            UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
            STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
            KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
            HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            Uniprot:Q22516
        Length = 1787

 Score = 425 (154.7 bits), Expect = 2.5e-38, P = 2.5e-38
 Identities = 97/227 (42%), Positives = 136/227 (59%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ D +N      +M L NI+M+L+KC NHPYLF  A    P   +       L+ N
Sbjct:   879 ILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKN 938

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             +GK V+L K+L KLK    RVLIFSQMT MLDILED+C   G+KY R+DG    + RQ  
Sbjct:   939 AGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDA 998

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI----- 171
             I+ +N  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  ++     
Sbjct:   999 IDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1058

Query:   172 ------LRRGSIKKALEAKMSRYRAPFHQL-RIAYGANKGKNYTEEE 211
                   + +GS+++ + +   +     H + R   GA  GK+ ++ E
Sbjct:  1059 VMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE 1105

 Score = 214 (80.4 bits), Expect = 7.0e-16, P = 7.0e-16
 Identities = 40/69 (57%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    + RQ  I+ +N  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP
Sbjct:   981 YKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNP 1040

Query:   274 QMDLQAMVR 282
               D+QA  R
Sbjct:  1041 HNDIQAFSR 1049


>UNIPROTKB|Q22516 [details] [associations]
            symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
            homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
            duplex unwinding" evidence=ISS] InterPro:IPR001841
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
            GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
            GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
            PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
            ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
            EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
            UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
            InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
        Length = 1787

 Score = 425 (154.7 bits), Expect = 2.5e-38, P = 2.5e-38
 Identities = 97/227 (42%), Positives = 136/227 (59%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ D +N      +M L NI+M+L+KC NHPYLF  A    P   +       L+ N
Sbjct:   879 ILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKN 938

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             +GK V+L K+L KLK    RVLIFSQMT MLDILED+C   G+KY R+DG    + RQ  
Sbjct:   939 AGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDA 998

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI----- 171
             I+ +N  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  ++     
Sbjct:   999 IDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1058

Query:   172 ------LRRGSIKKALEAKMSRYRAPFHQL-RIAYGANKGKNYTEEE 211
                   + +GS+++ + +   +     H + R   GA  GK+ ++ E
Sbjct:  1059 VMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE 1105

 Score = 214 (80.4 bits), Expect = 7.0e-16, P = 7.0e-16
 Identities = 40/69 (57%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    + RQ  I+ +N  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP
Sbjct:   981 YKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNP 1040

Query:   274 QMDLQAMVR 282
               D+QA  R
Sbjct:  1041 HNDIQAFSR 1049


>POMBASE|SPAC3G6.01 [details] [associations]
            symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
            species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
            chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
            "DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IMP]
            [GO:0031934 "mating-type region heterochromatin" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
            nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
            at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
            GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
            GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
            OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
            ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
            EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
            OMA:HINGSST NextBio:20804092 Uniprot:O14139
        Length = 1388

 Score = 413 (150.4 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
 Identities = 89/169 (52%), Positives = 112/169 (66%)

Query:    18 KMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTDE---HLVFNSGKMVVLDKLLP 68
             ++ L NI+++L+K SNHPYLFDG E             DE    L+ NSGKMV+LDKLL 
Sbjct:   641 QISLLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLS 700

Query:    69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
             +L+    RVLIFSQM RMLDIL DY   RG+ + RLDG      R+  I+ FN   S  F
Sbjct:   701 RLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDF 760

Query:   129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
             +F+LSTRAGGLGINL TAD V+++DSDWNPQ DLQAM R  +I ++  +
Sbjct:   761 VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 809

 Score = 209 (78.6 bits), Expect = 7.0e-15, P = 7.0e-15
 Identities = 41/69 (59%), Positives = 49/69 (71%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG      R+  I+ FN   S  F+F+LSTRAGGLGINL TAD V+++DSDWNP
Sbjct:   731 YPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNP 790

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   791 QADLQAMAR 799

 Score = 38 (18.4 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
 Identities = 19/81 (23%), Positives = 34/81 (41%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGAN---KGKNYTEE-EDRYLYCRLD 220
             M+ E  I+  G   K   +K  ++ A      + +GA+   K +N  ++ ED  L   L+
Sbjct:   832 MILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMFKAENNQKKLEDMNLDEILE 891

Query:   221 GQTAHEDRQRQINDFNMEGSD 241
                 H D    +   +M G +
Sbjct:   892 HAEDH-DTSNDVGGASMGGEE 911


>SGD|S000000966 [details] [associations]
            symbol:CHD1 "Chromatin remodeler that regulates various
            aspects of transcription" species:4932 "Saccharomyces cerevisiae"
            [GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
            "nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
            complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IDA] [GO:0001178 "regulation of transcriptional start site
            selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
            "negative regulation of histone H3-K9 acetylation" evidence=IMP]
            [GO:0071441 "negative regulation of histone H3-K14 acetylation"
            evidence=IMP] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
            chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
            evidence=IDA] [GO:0016584 "nucleosome positioning"
            evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
            lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0035064 "methylated histone residue binding" evidence=IDA]
            [GO:2000104 "negative regulation of DNA-dependent DNA replication"
            evidence=IGI] [GO:0006363 "termination of RNA polymerase I
            transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
            GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
            GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
            GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
            PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
            PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
            ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
            MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
            EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
            OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
            EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
            GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
            GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
        Length = 1468

 Score = 420 (152.9 bits), Expect = 6.2e-38, P = 6.2e-38
 Identities = 100/231 (43%), Positives = 134/231 (58%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP------GPPYTTDEH--- 52
             +L K+   +    K     L NI+ +L+K SNHPYLFD AE       G    T E+   
Sbjct:   629 ILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLR 688

Query:    53 -LVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHE 111
              L+ +SGKMV+LD+LL +LK    RVLIFSQM RMLDIL DY   +G  + RLDG     
Sbjct:   689 GLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSA 748

Query:   112 DRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              R+  I+ FN   S+ F+F+LSTRAGGLGINL TAD VV++DSDWNPQ DLQAM R  +I
Sbjct:   749 QRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRI 808

Query:   172 LRRGSI-------KKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEED 212
              ++  +       K  +E ++   +R +       I+ G   G  YT++ +
Sbjct:   809 GQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNE 859

 Score = 210 (79.0 bits), Expect = 4.4e-15, P = 4.4e-15
 Identities = 41/65 (63%), Positives = 48/65 (73%)

Query:   218 RLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 277
             RLDG      R+  I+ FN   S+ F+F+LSTRAGGLGINL TAD VV++DSDWNPQ DL
Sbjct:   740 RLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADL 799

Query:   278 QAMVR 282
             QAM R
Sbjct:   800 QAMAR 804


>ASPGD|ASPL0000052010 [details] [associations]
            symbol:AN1255 species:162425 "Emericella nidulans"
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
            "mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IEA]
            [GO:0060303 "regulation of nucleosome density" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
            ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
            EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
            OMA:GPRRMAI Uniprot:Q5BDX5
        Length = 1517

 Score = 420 (152.9 bits), Expect = 6.5e-38, P = 6.5e-38
 Identities = 91/176 (51%), Positives = 114/176 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP----GPPYTTD--EHLVF 55
             +L K+   +N   K +K  L NI+M+L+K SNHP++F  AE     G     D    L+ 
Sbjct:   694 ILTKNYAALNEGTKGQKQSLLNIMMELKKASNHPFMFPSAETKILEGSTRREDVLRALIT 753

Query:    56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
             +SGKM++LD+LL KLK    RVLIFSQM +MLDIL DY  +RG+ Y RLDG      R+ 
Sbjct:   754 SSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRL 813

Query:   116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              I  +N   S  F F+LSTRAGGLGINL TAD V+L+DSDWNPQ DLQAM R  +I
Sbjct:   814 AIEHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRI 869

 Score = 210 (79.0 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
 Identities = 42/69 (60%), Positives = 47/69 (68%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDG      R+  I  +N   S  F F+LSTRAGGLGINL TAD V+L+DSDWNP
Sbjct:   797 YTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDSDWNP 856

Query:   274 QMDLQAMVR 282
             Q DLQAM R
Sbjct:   857 QADLQAMAR 865

 Score = 39 (18.8 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query:   173 RRGSIKKALEAKMSRYRAPFH-QLRIAY-GANKGKNYTEEEDRYLY 216
             R    K+    + S    P H ++R +   A K  NY E++D  ++
Sbjct:   194 RASKAKRRRLLQASANNVPSHAEVRFSTRNAAKVSNYNEDDDDSMF 239


>UNIPROTKB|J9NRN3 [details] [associations]
            symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
            EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
            Uniprot:J9NRN3
        Length = 1195

 Score = 418 (152.2 bits), Expect = 7.1e-38, P = 7.1e-38
 Identities = 86/175 (49%), Positives = 116/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   937 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 996

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:   997 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1056

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I
Sbjct:  1057 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI 1111

 Score = 211 (79.3 bits), Expect = 8.8e-16, P = 8.8e-16
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:  1003 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1062

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1063 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1107


>UNIPROTKB|F1ST12 [details] [associations]
            symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
            "chromatin assembly or disassembly" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
            EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
            Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
            Uniprot:F1ST12
        Length = 2002

 Score = 416 (151.5 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
 Identities = 88/175 (50%), Positives = 116/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+  
Sbjct:   999 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKA 1058

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1059 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1118

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1119 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1173

 Score = 206 (77.6 bits), Expect = 4.5e-14, P = 4.5e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1051 EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1169

 Score = 37 (18.1 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
 Identities = 12/46 (26%), Positives = 19/46 (41%)

Query:   199 YGANKGKNYTEEE--DRYLYCRLDGQTAHEDRQRQINDFNMEGSDI 242
             Y  ++ K+ TE    +R     LDGQ   E  + +  D      D+
Sbjct:  1634 YRGDREKSATESTPGERGEEKPLDGQEQRERPEGETGDLGKRAEDV 1679


>UNIPROTKB|F2Z2R5 [details] [associations]
            symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
            GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
            ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
            Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
            Uniprot:F2Z2R5
        Length = 1225

 Score = 418 (152.2 bits), Expect = 7.4e-38, P = 7.4e-38
 Identities = 86/175 (49%), Positives = 116/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   963 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 1022

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1023 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1082

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I
Sbjct:  1083 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI 1137

 Score = 211 (79.3 bits), Expect = 9.1e-16, P = 9.1e-16
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:  1029 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1088

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1133


>UNIPROTKB|F1MFF9 [details] [associations]
            symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
            Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
        Length = 1852

 Score = 420 (152.9 bits), Expect = 8.8e-38, P = 8.8e-38
 Identities = 89/185 (48%), Positives = 120/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   909 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 968

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+ +  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:   969 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1028

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1029 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1085

Query:   177 IKKAL 181
              KK +
Sbjct:  1086 NKKVM 1090

 Score = 211 (79.3 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:   975 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1034

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1035 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1079


>RGD|1311923 [details] [associations]
            symbol:Chd3 "chromodomain helicase DNA binding protein 3"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
            [GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
            complex" evidence=ISO] [GO:0045111 "intermediate filament
            cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
            evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
            IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
            STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
        Length = 1925

 Score = 419 (152.6 bits), Expect = 1.2e-37, P = 1.2e-37
 Identities = 88/175 (50%), Positives = 117/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+ +
Sbjct:   955 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKS 1014

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1015 SGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1074

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1075 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1129

 Score = 206 (77.6 bits), Expect = 4.3e-14, P = 4.3e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1007 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1066

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1067 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1125


>UNIPROTKB|Q12873 [details] [associations]
            symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
            "zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
            [GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
            filament cytoskeleton" evidence=IDA] InterPro:IPR001841
            InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
            EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
            GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
            InterPro:IPR019786 PROSITE:PS01359
            Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
            IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
            RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
            SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
            STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
            PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
            GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
            GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
            HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
            HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
            GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
            CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
            Uniprot:Q12873
        Length = 2000

 Score = 419 (152.6 bits), Expect = 1.3e-37, P = 1.3e-37
 Identities = 88/175 (50%), Positives = 117/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+ +
Sbjct:   999 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKS 1058

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1059 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1118

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1119 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1173

 Score = 206 (77.6 bits), Expect = 4.5e-14, P = 4.5e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1051 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1110

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1111 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1169


>UNIPROTKB|F1LPP7 [details] [associations]
            symbol:Chd3 "Protein Chd3" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
            Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
        Length = 2020

 Score = 419 (152.6 bits), Expect = 1.3e-37, P = 1.3e-37
 Identities = 88/175 (50%), Positives = 117/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+ +
Sbjct:  1050 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKS 1109

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1110 SGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1169

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1170 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1224

 Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1102 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1161

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1162 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1220


>UNIPROTKB|F1M7Q0 [details] [associations]
            symbol:Chd3 "Protein Chd3" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
            IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
        Length = 2054

 Score = 419 (152.6 bits), Expect = 1.3e-37, P = 1.3e-37
 Identities = 88/175 (50%), Positives = 117/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+ +
Sbjct:  1050 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKS 1109

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1110 SGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1169

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1170 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1224

 Score = 206 (77.6 bits), Expect = 4.7e-14, P = 4.7e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1102 EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1161

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1162 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1220


>UNIPROTKB|E9PG89 [details] [associations]
            symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
            disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
            InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
            SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
            GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
            KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
            NextBio:4590 EMBL:AC104581 IPI:IPI00465222
            ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
            Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
            ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
        Length = 2059

 Score = 419 (152.6 bits), Expect = 1.3e-37, P = 1.3e-37
 Identities = 88/175 (50%), Positives = 117/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+ +
Sbjct:  1058 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKS 1117

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1118 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1177

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1178 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1232

 Score = 206 (77.6 bits), Expect = 4.7e-14, P = 4.7e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1110 EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1169

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1170 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1228


>UNIPROTKB|Q3L8U1 [details] [associations]
            symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
            process" evidence=TAS] [GO:0044281 "small molecule metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
            GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
            EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
            EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
            IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
            UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
            IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
            PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
            Ensembl:ENST00000447540 Ensembl:ENST00000564845
            Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
            UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
            HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
            InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
            NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
            Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
        Length = 2897

 Score = 412 (150.1 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 96/216 (44%), Positives = 131/216 (60%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GP------PYTTDE 51
             +L K+   ++ GAG+     L N +M+LRKC NHPYL  GAE    G       P  +D 
Sbjct:  1113 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDF 1172

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   + + Y R+DG+ 
Sbjct:  1173 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1232

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1233 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1292

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1293 HRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDK 1328

 Score = 209 (78.6 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 52/133 (39%), Positives = 75/133 (56%)

Query:   156 WNP---QMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE-- 210
             +NP      LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+  
Sbjct:  1165 YNPAASDFHLQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 1218

Query:   211 -EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
                RYLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DS
Sbjct:  1219 IHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 1278

Query:   270 DWNPQMDLQAMVR 282
             DWNPQ DLQA  R
Sbjct:  1279 DWNPQNDLQAQAR 1291

 Score = 42 (19.8 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADV 263
             LD Q   + R+ +    N+EG DIF F  +     + + L ++ +
Sbjct:  2422 LDNQPIVKKRRGRRK--NVEGVDIFFFNRNKPPNHVSLGLTSSQI 2464


>UNIPROTKB|E2RDK8 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
            EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
            Uniprot:E2RDK8
        Length = 2902

 Score = 412 (150.1 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 96/216 (44%), Positives = 131/216 (60%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GP------PYTTDE 51
             +L K+   ++ GAG+     L N +M+LRKC NHPYL  GAE    G       P  +D 
Sbjct:  1115 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDF 1174

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   + + Y R+DG+ 
Sbjct:  1175 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1234

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1235 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1294

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1295 HRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDK 1330

 Score = 209 (78.6 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 52/133 (39%), Positives = 75/133 (56%)

Query:   156 WNP---QMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE-- 210
             +NP      LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+  
Sbjct:  1167 YNPAASDFHLQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 1220

Query:   211 -EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
                RYLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DS
Sbjct:  1221 IHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 1280

Query:   270 DWNPQMDLQAMVR 282
             DWNPQ DLQA  R
Sbjct:  1281 DWNPQNDLQAQAR 1293

 Score = 41 (19.5 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query:   218 RLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADV 263
             RLD Q   + R+ +    N+EG DI  F  +     + + L T+ +
Sbjct:  2424 RLDNQPIVKKRRGRRK--NVEGVDILFFNRNKPPNHVTLGLNTSQI 2467


>UNIPROTKB|F1S594 [details] [associations]
            symbol:LOC100622433 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
            GeneTree:ENSGT00550000074659 EMBL:FP102365
            Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
        Length = 866

 Score = 411 (149.7 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 102/256 (39%), Positives = 142/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:   268 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 323

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:   324 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 383

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:   384 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 443

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:   444 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 502

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:   503 LEHEEQDEEEDEVPDD 518

 Score = 218 (81.8 bits), Expect = 1.0e-16, P = 1.0e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:   373 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 432

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:   433 HQDLQAQDR 441


>UNIPROTKB|K7GT64 [details] [associations]
            symbol:LOC100622433 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
            Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
        Length = 980

 Score = 412 (150.1 bits), Expect = 2.0e-37, P = 2.0e-37
 Identities = 102/250 (40%), Positives = 140/250 (56%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:   349 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 404

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:   405 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 464

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:   465 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 524

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:   525 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 583

Query:   219 LDGQTAHEDR 228
             L+ +   E R
Sbjct:   584 LEHEEQDESR 593

 Score = 218 (81.8 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:   454 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 513

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:   514 HQDLQAQDR 522


>UNIPROTKB|F1N544 [details] [associations]
            symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
            "chromatin assembly or disassembly" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
            IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
            Uniprot:F1N544
        Length = 1998

 Score = 417 (151.9 bits), Expect = 2.1e-37, P = 2.1e-37
 Identities = 88/175 (50%), Positives = 116/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+  
Sbjct:   995 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKA 1054

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1055 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1114

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1115 IDRFNAHGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1169

 Score = 207 (77.9 bits), Expect = 3.1e-14, P = 3.1e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1047 EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1106

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1107 TGALRQEAIDRFNAHGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1165


>UNIPROTKB|F1NH78 [details] [associations]
            symbol:F1NH78 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
            Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
        Length = 1781

 Score = 416 (151.5 bits), Expect = 2.2e-37, P = 2.2e-37
 Identities = 89/185 (48%), Positives = 119/185 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P   +       LV +
Sbjct:   895 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKS 954

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KL+    RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:   955 SGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1014

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1015 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1071

Query:   177 IKKAL 181
              KK +
Sbjct:  1072 NKKVM 1076

 Score = 210 (79.0 bits), Expect = 5.5e-15, P = 5.5e-15
 Identities = 48/105 (45%), Positives = 62/105 (59%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNM 237
             L+  + + R   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN 
Sbjct:   961 LQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1020

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
              G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1021 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1065


>UNIPROTKB|H3BTW3 [details] [associations]
            symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
            EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
            Uniprot:H3BTW3
        Length = 1099

 Score = 412 (150.1 bits), Expect = 2.6e-37, P = 2.6e-37
 Identities = 96/216 (44%), Positives = 131/216 (60%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GP------PYTTDE 51
             +L K+   ++ GAG+     L N +M+LRKC NHPYL  GAE    G       P  +D 
Sbjct:   639 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDF 698

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   + + Y R+DG+ 
Sbjct:   699 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 758

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   759 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 818

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   819 HRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDK 854

 Score = 209 (78.6 bits), Expect = 5.1e-15, P = 5.1e-15
 Identities = 52/133 (39%), Positives = 75/133 (56%)

Query:   156 WNP---QMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE-- 210
             +NP      LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+  
Sbjct:   691 YNPAASDFHLQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 744

Query:   211 -EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
                RYLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DS
Sbjct:   745 IHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 804

Query:   270 DWNPQMDLQAMVR 282
             DWNPQ DLQA  R
Sbjct:   805 DWNPQNDLQAQAR 817


>UNIPROTKB|E2RTI2 [details] [associations]
            symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
            "chromatin assembly or disassembly" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
            EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
        Length = 1998

 Score = 416 (151.5 bits), Expect = 2.6e-37, P = 2.6e-37
 Identities = 88/175 (50%), Positives = 116/175 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEH--LVFN 56
             +L ++ + +N  G   ++ L NI+M L+KC NHPYLF  A    P  P    E   L+  
Sbjct:   997 ILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKA 1056

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK Q  RVLIFSQMT+MLD+LED+  + G+KY R+DG      RQ  
Sbjct:  1057 SGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1116

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R  +I
Sbjct:  1117 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1171

 Score = 206 (77.6 bits), Expect = 4.5e-14, P = 4.5e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             E   L + S K  L  KM R  +   H++ I     K  +  E+    + Y Y R+DG  
Sbjct:  1049 EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGI 1108

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:  1109 TGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSR 1167


>UNIPROTKB|E1BDZ3 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
            IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
        Length = 2900

 Score = 412 (150.1 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
 Identities = 96/216 (44%), Positives = 131/216 (60%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GP------PYTTDE 51
             +L K+   ++ GAG+     L N +M+LRKC NHPYL  GAE    G       P  +D 
Sbjct:  1114 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDF 1173

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   + + Y R+DG+ 
Sbjct:  1174 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1233

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1234 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1293

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1294 HRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDK 1329

 Score = 209 (78.6 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 52/133 (39%), Positives = 75/133 (56%)

Query:   156 WNP---QMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE-- 210
             +NP      LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+  
Sbjct:  1166 YNPAASDFHLQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 1219

Query:   211 -EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
                RYLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DS
Sbjct:  1220 IHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 1279

Query:   270 DWNPQMDLQAMVR 282
             DWNPQ DLQA  R
Sbjct:  1280 DWNPQNDLQAQAR 1292

 Score = 39 (18.8 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADV 263
             LD Q   + R+ +    N+EG DI  F  +     + + L T+ +
Sbjct:  2425 LDNQPVVKKRRGRRK--NVEGVDILFFNRNKPPNHVTLGLTTSQI 2467


>UNIPROTKB|D4AA07 [details] [associations]
            symbol:Smarca4 "Transcription activator BRG1" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
            ArrayExpress:D4AA07 Uniprot:D4AA07
        Length = 1262

 Score = 412 (150.1 bits), Expect = 3.4e-37, P = 3.4e-37
 Identities = 102/250 (40%), Positives = 140/250 (56%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:   815 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 870

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:   871 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 930

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:   931 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 990

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:   991 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1049

Query:   219 LDGQTAHEDR 228
             L+ +   E R
Sbjct:  1050 LEHEEQDESR 1059

 Score = 218 (81.8 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:   920 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 979

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:   980 HQDLQAQDR 988


>UNIPROTKB|F1N8K9 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0004386 GeneTree:ENSGT00560000076896
            EMBL:AADN02065411 EMBL:AADN02065412 EMBL:AADN02065413
            IPI:IPI00592819 Ensembl:ENSGALT00000023600 ArrayExpress:F1N8K9
            Uniprot:F1N8K9
        Length = 559

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 81/149 (54%), Positives = 106/149 (71%)

Query:    26 MQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLIFSQ 82
             M+L+KC NH YL    +    Y   E   HL+ +SGK+++LDKLL +L+ + +RVLIFSQ
Sbjct:     1 MELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 60

Query:    83 MTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGIN 142
             M RMLDIL +Y  +R F + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGIN
Sbjct:    61 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 120

Query:   143 LATADVVVLYDSDWNPQMDLQAMVREAKI 171
             LA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   121 LASADTVVIFDSDWNPQNDLQAQARAHRI 149

 Score = 218 (81.8 bits), Expect = 4.6e-17, P = 4.6e-17
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:    76 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 135

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   136 PQNDLQAQAR 145


>UNIPROTKB|B6ZLK2 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
            UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
        Length = 1719

 Score = 413 (150.4 bits), Expect = 4.4e-37, P = 4.4e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   725 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSG 784

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   785 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 844

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   845 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 897

 Score = 218 (81.8 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   824 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 883

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   884 PQNDLQAQAR 893

 Score = 50 (22.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
 Identities = 21/107 (19%), Positives = 45/107 (42%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   332 ETLKQQNV-KGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 389

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q +I+++
Sbjct:   390 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEY 436


>UNIPROTKB|F1NP27 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
            EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
            ArrayExpress:F1NP27 Uniprot:F1NP27
        Length = 1803

 Score = 413 (150.4 bits), Expect = 4.7e-37, P = 4.7e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   721 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSG 780

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   781 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 840

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   841 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 893

 Score = 218 (81.8 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   820 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 879

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   880 PQNDLQAQAR 889

 Score = 50 (22.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 21/107 (19%), Positives = 45/107 (42%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   333 ETLKQQNV-KGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 390

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q +I+++
Sbjct:   391 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEY 437


>UNIPROTKB|F1N8K8 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
            EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
            Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
        Length = 1804

 Score = 413 (150.4 bits), Expect = 4.7e-37, P = 4.7e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   721 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSG 780

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   781 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 840

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   841 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 893

 Score = 218 (81.8 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   820 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 879

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   880 PQNDLQAQAR 889

 Score = 50 (22.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 21/107 (19%), Positives = 45/107 (42%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   333 ETLKQQNV-KGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 390

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q +I+++
Sbjct:   391 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEY 437


>UNIPROTKB|P51532 [details] [associations]
            symbol:SMARCA4 "Transcription activator BRG1" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
            "SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
            corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
            [GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
            remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IDA] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
            of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI;IDA]
            [GO:0060766 "negative regulation of androgen receptor signaling
            pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
            evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IGI] [GO:0045749 "negative regulation of S phase of
            mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
            coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=NAS]
            [GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
            "positive regulation by host of viral transcription" evidence=IMP]
            [GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
            retina development" evidence=IEP] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
            GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
            GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
            GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
            InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
            GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
            CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
            EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
            IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
            IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
            RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
            RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
            PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
            ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
            MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
            PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
            Ensembl:ENST00000413806 Ensembl:ENST00000429416
            Ensembl:ENST00000444061 Ensembl:ENST00000450717
            Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
            GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
            MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
            PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
            GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
            CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
            Uniprot:P51532
        Length = 1647

 Score = 412 (150.1 bits), Expect = 5.3e-37, P = 5.3e-37
 Identities = 102/250 (40%), Positives = 140/250 (56%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1016 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1071

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1192 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250

Query:   219 LDGQTAHEDR 228
             L+ +   E R
Sbjct:  1251 LEHEEQDESR 1260

 Score = 218 (81.8 bits), Expect = 2.4e-16, P = 2.4e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1181 HQDLQAQDR 1189


>FB|FBgn0262519 [details] [associations]
            symbol:Mi-2 species:7227 "Drosophila melanogaster"
            [GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
            "nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
            evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
            helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
            evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
            organ development" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
            evidence=IDA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0070615
            "nucleosome-dependent ATPase activity" evidence=IDA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
            GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
            PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
            RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
            SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
            STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
            EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
            CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
            ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
            GermOnline:CG8103 Uniprot:O97159
        Length = 1982

 Score = 413 (150.4 bits), Expect = 5.4e-37, P = 5.4e-37
 Identities = 101/251 (40%), Positives = 144/251 (57%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP------GPPYTTDEHLVF 55
             +L K+ + +N         L NI+M L+KC NHPYLF  A        G  Y  +  L  
Sbjct:   991 ILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINS-LTK 1049

Query:    56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
              +GK+V+L K+L +LKAQ  RVLIFSQMT+MLDILED+     +KY R+DG      RQ 
Sbjct:  1050 AAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQE 1109

Query:   116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI---- 171
              I+ FN  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I    
Sbjct:  1110 AIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQAN 1169

Query:   172 -------LRRGSIKKALEAKMSRYRAPFHQLRIAYG-ANKGKNYTEEE-DRYLYCRLDGQ 222
                    + R S+++ +  ++++ +     L +  G   KG N+T++E D  L    +  
Sbjct:  1170 KVMIYRFVTRNSVEERV-TQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDL 1228

Query:   223 TAHEDRQRQIN 233
                +D++  I+
Sbjct:  1229 FKEDDKEEAIH 1239

 Score = 225 (84.3 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 53/119 (44%), Positives = 71/119 (59%)

Query:   168 EAKILRRGSIKKALEAKM-SRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             E   L + + K  L +KM  + +A  H++ I     K  +  E   E ++Y Y R+DG  
Sbjct:  1043 EINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGI 1102

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1103 TGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1161


>UNIPROTKB|Q9HBD4 [details] [associations]
            symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
            sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
            morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
            growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
            euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0006346 "methylation-dependent chromatin silencing"
            evidence=IEA] [GO:0007403 "glial cell fate determination"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
            sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
            evidence=IEA] [GO:0030198 "extracellular matrix organization"
            evidence=IEA] [GO:0030216 "keratinocyte differentiation"
            evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
            "embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
            "aortic smooth muscle cell differentiation" evidence=IEA]
            [GO:0043388 "positive regulation of DNA binding" evidence=IEA]
            [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
            [GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
            [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
            "npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
            GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
            GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
            EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
            GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
            GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
            GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
            GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
            CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
            KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
            GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
            SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
            Uniprot:Q9HBD4
        Length = 1679

 Score = 412 (150.1 bits), Expect = 5.4e-37, P = 5.4e-37
 Identities = 102/250 (40%), Positives = 140/250 (56%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1016 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1071

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1192 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250

Query:   219 LDGQTAHEDR 228
             L+ +   E R
Sbjct:  1251 LEHEEQDESR 1260

 Score = 218 (81.8 bits), Expect = 2.4e-16, P = 2.4e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1181 HQDLQAQDR 1189


>UNIPROTKB|O14646 [details] [associations]
            symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
            binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=TAS] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
            GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
            KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
            IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
            PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
            PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
            ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
            PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
            Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
            GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
            HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
            HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
            OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
            EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
            ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
            Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
        Length = 1710

 Score = 412 (150.1 bits), Expect = 5.6e-37, P = 5.6e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   729 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 788

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   789 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 848

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   849 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 901

 Score = 218 (81.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   828 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 887

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   888 PQNDLQAQAR 897

 Score = 47 (21.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
 Identities = 21/107 (19%), Positives = 44/107 (41%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   336 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 393

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   394 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEY 440


>MGI|MGI:88393 [details] [associations]
            symbol:Chd1 "chromodomain helicase DNA binding protein 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=NAS] [GO:0004386 "helicase activity"
            evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
            [GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 CTD:1105
            GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
            OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
            EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
            UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
            STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
            Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
            InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
            Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
        Length = 1711

 Score = 412 (150.1 bits), Expect = 5.6e-37, P = 5.6e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   727 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 786

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   787 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 846

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   847 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 899

 Score = 218 (81.8 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   826 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 885

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   886 PQNDLQAQAR 895

 Score = 50 (22.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
 Identities = 21/107 (19%), Positives = 45/107 (42%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   334 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 391

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S       + + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   392 IIAHSNQKSAAGLPDYYCKWQGLPYSECSWEDGALISKKFQTCIDEY 438


>UNIPROTKB|E2QUI5 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 CTD:1105
            GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
            RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
            KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
        Length = 1711

 Score = 412 (150.1 bits), Expect = 5.6e-37, P = 5.6e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   728 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 787

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   788 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 847

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   848 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 900

 Score = 218 (81.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   827 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 886

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   887 PQNDLQAQAR 896

 Score = 47 (21.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
 Identities = 21/107 (19%), Positives = 44/107 (41%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   335 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 392

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   393 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEY 439


>UNIPROTKB|J9P6Y8 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
            Uniprot:J9P6Y8
        Length = 1782

 Score = 412 (150.1 bits), Expect = 5.9e-37, P = 5.9e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   711 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 770

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   771 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 830

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   831 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 883

 Score = 218 (81.8 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   810 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 869

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   870 PQNDLQAQAR 879

 Score = 47 (21.6 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
 Identities = 21/107 (19%), Positives = 44/107 (41%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   318 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 375

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   376 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEY 422


>UNIPROTKB|F1MGF2 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
            EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
            Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
        Length = 1810

 Score = 412 (150.1 bits), Expect = 6.1e-37, P = 6.1e-37
 Identities = 85/173 (49%), Positives = 116/173 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   741 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 800

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   801 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 860

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   861 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 913

 Score = 218 (81.8 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   840 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 899

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   900 PQNDLQAQAR 909

 Score = 41 (19.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
 Identities = 16/80 (20%), Positives = 34/80 (42%)

Query:    47 YTTDEHLVFNSGKMV-VLDKLLPKLKAQESRVLI--FSQMTRMLDILEDYCYWRGFKY-- 101
             Y   + L  +  K   ++++++ K++ +   V +   S         + YC W+G  Y  
Sbjct:   373 YNCQQELTDDLHKQYQIVERIIDKIQCKIYLVYLTAHSNQKSAAGYPDYYCKWQGLPYSE 432

Query:   102 CRL-DGQTAHEDRQRQINDF 120
             C   DG    +  Q  I+++
Sbjct:   433 CSWEDGALISKKFQACIDEY 452


>DICTYBASE|DDB_G0280705 [details] [associations]
            symbol:DDB_G0280705 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
            dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
            GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
            EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
            InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
            Uniprot:Q54UZ8
        Length = 2373

 Score = 404 (147.3 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
 Identities = 84/170 (49%), Positives = 110/170 (64%)

Query:     5 KDIDVVNGAGKLEK-MRLQNILMQLRKCSNHPYLFDGAEPGPPYTT-DEHLVFN-----S 57
             K+   +   GK  +   L NI+M+LRKC NHPYL  G E     +  D+  +F      S
Sbjct:   773 KNFSFLRKGGKSNQGPSLLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQKLIQAS 832

Query:    58 GKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQI 117
             GK+V++DKLLPKLK    +VLIFSQM  +LDIL+DY  +RG+ + R+DG     DRQ  I
Sbjct:   833 GKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAI 892

Query:   118 NDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             + F+   SD F+F+L TRAGG+GINL  AD V+++DSDWNPQ DLQA  R
Sbjct:   893 DRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQAR 942

 Score = 202 (76.2 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 38/69 (55%), Positives = 48/69 (69%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + R+DG     DRQ  I+ F+   SD F+F+L TRAGG+GINL  AD V+++DSDWNP
Sbjct:   874 YPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNP 933

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   934 QNDLQAQAR 942

 Score = 42 (19.8 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query:   200 GANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQIND 234
             G NK  N   E  R    + DG   +E+    IND
Sbjct:  2331 GYNKNNNNRFEYKRNSQIQDDGDYEYEEDDGYIND 2365


>UNIPROTKB|A7Z019 [details] [associations]
            symbol:SMARCA4 "Transcription activator BRG1" species:9913
            "Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
            "npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
            formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
            differentiation" evidence=IEA] [GO:0048730 "epidermis
            morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
            "positive regulation of DNA binding" evidence=IEA] [GO:0035887
            "aortic smooth muscle cell differentiation" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
            "forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
            differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
            organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
            evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
            sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0007403 "glial cell fate determination"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
            [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
            [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
            GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
            GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
            GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
            GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
            GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
            HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
            OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
            RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
            SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
            CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
            Uniprot:A7Z019
        Length = 1606

 Score = 411 (149.7 bits), Expect = 6.5e-37, P = 6.5e-37
 Identities = 102/256 (39%), Positives = 142/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1008 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1063

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1064 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1123

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1124 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1183

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1184 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1242

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1243 LEHEEQDEEEDEVPDD 1258

 Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1113 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1172

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1173 HQDLQAQDR 1181


>MGI|MGI:88192 [details] [associations]
            symbol:Smarca4 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 4"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
            evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
            [GO:0000977 "RNA polymerase II regulatory region sequence-specific
            DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=ISO] [GO:0001570
            "vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
            development" evidence=IMP] [GO:0001832 "blastocyst growth"
            evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
            [GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
            binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003713 "transcription
            coactivator activity" evidence=ISO] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
            [GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
            evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
            [GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO;IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IMP] [GO:0007403 "glial cell fate determination"
            evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=IPI]
            [GO:0010424 "DNA methylation on cytosine within a CG sequence"
            evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
            evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
            [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
            matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
            differentiation" evidence=IMP] [GO:0030308 "negative regulation of
            cell growth" evidence=ISO] [GO:0030900 "forebrain development"
            evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
            [GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
            "protein complex binding" evidence=ISO] [GO:0035116 "embryonic
            hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
            muscle cell differentiation" evidence=IMP] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
            "positive regulation of DNA binding" evidence=IGI] [GO:0043923
            "positive regulation by host of viral transcription" evidence=ISO]
            [GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
            "protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
            organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
            morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
            binding" evidence=ISO] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
            evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
            [GO:0060766 "negative regulation of androgen receptor signaling
            pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
            evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
            [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
            complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
            GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
            GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
            GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
            GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
            GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
            GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
            GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
            GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
            HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
            EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
            IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
            RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
            ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
            IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
            PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
            Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
            KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
            NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
        Length = 1613

 Score = 411 (149.7 bits), Expect = 6.5e-37, P = 6.5e-37
 Identities = 102/256 (39%), Positives = 142/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1016 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1071

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1192 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1251 LEHEEQDEEEDEVPDD 1266

 Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1181 HQDLQAQDR 1189


>RGD|621728 [details] [associations]
            symbol:Smarca4 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 4"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
            "heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
            evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
            sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
            polymerase II transcription coactivator activity" evidence=ISO]
            [GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
            embryonic development" evidence=ISO] [GO:0001832 "blastocyst
            growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
            evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
            [GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
            development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
            "transcription coactivator activity" evidence=ISO] [GO:0003714
            "transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
            evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
            [GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
            evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0010424 "DNA methylation on cytosine within a CG sequence"
            evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
            maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
            [GO:0030198 "extracellular matrix organization" evidence=ISO]
            [GO:0030216 "keratinocyte differentiation" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
            "hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
            binding" evidence=ISO] [GO:0032403 "protein complex binding"
            evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=ISO] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
            binding" evidence=ISO] [GO:0043923 "positive regulation by host of
            viral transcription" evidence=ISO] [GO:0043966 "histone H3
            acetylation" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0047485 "protein
            N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
            morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0051091 "positive regulation of sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0060318
            "definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
            "heart trabecula formation" evidence=ISO] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=ISO]
            [GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
            [GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
            complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
            GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
            GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
            GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
            HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
            ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
            PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
            Genevestigator:Q8K1P7 Uniprot:Q8K1P7
        Length = 1613

 Score = 411 (149.7 bits), Expect = 6.5e-37, P = 6.5e-37
 Identities = 102/256 (39%), Positives = 142/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1016 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1071

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1192 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1251 LEHEEQDEEEDEVPDD 1266

 Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1181 HQDLQAQDR 1189


>UNIPROTKB|E2RJ89 [details] [associations]
            symbol:SMARCA4 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
            Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
            OMA:HKPMESM Uniprot:E2RJ89
        Length = 1614

 Score = 411 (149.7 bits), Expect = 6.5e-37, P = 6.5e-37
 Identities = 102/256 (39%), Positives = 142/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1016 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1071

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1192 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1251 LEHEEQDEEEDEVPDD 1266

 Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1181 HQDLQAQDR 1189


>UNIPROTKB|G3V790 [details] [associations]
            symbol:Smarca4 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 4, isoform
            CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
            polymerase II regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
            "blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
            evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=IEA]
            [GO:0007403 "glial cell fate determination" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0010424 "DNA methylation on cytosine within a CG sequence"
            evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
            [GO:0030198 "extracellular matrix organization" evidence=IEA]
            [GO:0030216 "keratinocyte differentiation" evidence=IEA]
            [GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
            "hindbrain development" evidence=IEA] [GO:0035116 "embryonic
            hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
            muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
            acetylation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
            [GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
            "definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
            "heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
            complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
            UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
        Length = 1614

 Score = 411 (149.7 bits), Expect = 6.5e-37, P = 6.5e-37
 Identities = 102/256 (39%), Positives = 142/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1016 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1071

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1192 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1251 LEHEEQDEEEDEVPDD 1266

 Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1181 HQDLQAQDR 1189


>UNIPROTKB|F1M6Y4 [details] [associations]
            symbol:Smarca4 "Transcription activator BRG1" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
            morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
            growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
            "perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
            remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
            chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
            determination" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
            within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
            maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
            organization" evidence=IEA] [GO:0030216 "keratinocyte
            differentiation" evidence=IEA] [GO:0030900 "forebrain development"
            evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0035887 "aortic smooth muscle cell differentiation"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
            evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
            evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
            [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
            GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
            GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
            GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
            GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
            GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
            GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
            ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
        Length = 1618

 Score = 411 (149.7 bits), Expect = 6.6e-37, P = 6.6e-37
 Identities = 102/256 (39%), Positives = 142/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1016 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1071

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1072 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1131

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1132 AEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1191

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1192 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1251 LEHEEQDEEEDEVPDD 1266

 Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1121 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1180

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1181 HQDLQAQDR 1189


>RGD|1594200 [details] [associations]
            symbol:LOC680231 "similar to chromodomain helicase DNA binding
            protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
            Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
        Length = 2881

 Score = 412 (150.1 bits), Expect = 1.1e-36, P = 1.1e-36
 Identities = 96/216 (44%), Positives = 131/216 (60%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GP------PYTTDE 51
             +L K+   ++ GAG+     L N +M+LRKC NHPYL  GAE    G       P  +D 
Sbjct:  1112 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNPSASDF 1171

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   + + Y R+DG+ 
Sbjct:  1172 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1231

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1232 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1291

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1292 HRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDK 1327

 Score = 210 (79.0 bits), Expect = 9.6e-15, P = 9.6e-15
 Identities = 53/145 (36%), Positives = 79/145 (54%)

Query:   144 ATADVVVLYDSDWNPQMD---LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYG 200
             A   ++  +   +NP      LQAM++ A     G +   ++  + + +A  H++ I   
Sbjct:  1152 AEEKIIGEFRDTYNPSASDFHLQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQ 1205

Query:   201 ANKGKNYTEE---EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGIN 257
               +  +  E+     RYLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGIN
Sbjct:  1206 MVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN 1265

Query:   258 LATADVVVLYDSDWNPQMDLQAMVR 282
             L  AD  +++DSDWNPQ DLQA  R
Sbjct:  1266 LTAADTCIIFDSDWNPQNDLQAQAR 1290


>MGI|MGI:1924001 [details] [associations]
            symbol:Chd9 "chromodomain helicase DNA binding protein 9"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
            MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
            HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
            KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
            EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
            IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
            ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
            PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
            Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
            KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
            OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
            CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
        Length = 2885

 Score = 412 (150.1 bits), Expect = 1.1e-36, P = 1.1e-36
 Identities = 96/216 (44%), Positives = 131/216 (60%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GP------PYTTDE 51
             +L K+   ++ GAG+     L N +M+LRKC NHPYL  GAE    G       P  +D 
Sbjct:  1112 ILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDF 1171

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   + + Y R+DG+ 
Sbjct:  1172 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1231

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1232 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1291

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1292 HRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDK 1327

 Score = 209 (78.6 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 52/133 (39%), Positives = 75/133 (56%)

Query:   156 WNPQMD---LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE-- 210
             +NP      LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+  
Sbjct:  1164 YNPSASDFHLQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 1217

Query:   211 -EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
                RYLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DS
Sbjct:  1218 IHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 1277

Query:   270 DWNPQMDLQAMVR 282
             DWNPQ DLQA  R
Sbjct:  1278 DWNPQNDLQAQAR 1290


>ZFIN|ZDB-GENE-030131-497 [details] [associations]
            symbol:chd9 "chromodomain helicase DNA binding
            protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
            EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
            Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
        Length = 2948

 Score = 412 (150.1 bits), Expect = 1.2e-36, P = 1.2e-36
 Identities = 96/216 (44%), Positives = 128/216 (59%)

Query:     2 VLMKDID-VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDE 51
             +L K+   +  GAG+     L N +M+LRKC NHPYL  GAE            P   D 
Sbjct:  1166 ILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKGAEEKIMEDFKEVYSPAAVDF 1225

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1226 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1285

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1286 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1345

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1346 HRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDK 1381

 Score = 209 (78.6 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 50/124 (40%), Positives = 73/124 (58%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
             LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+   + RYLY R
Sbjct:  1227 LQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1280

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             +DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ
Sbjct:  1281 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1340

Query:   279 AMVR 282
             A  R
Sbjct:  1341 AQAR 1344


>UNIPROTKB|F1RN66 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
            Uniprot:F1RN66
        Length = 1794

 Score = 409 (149.0 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 84/169 (49%), Positives = 114/169 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   723 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 782

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   783 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 842

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R
Sbjct:   843 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 891

 Score = 218 (81.8 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   822 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 881

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   882 PQNDLQAQAR 891

 Score = 47 (21.6 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
 Identities = 21/107 (19%), Positives = 44/107 (41%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   330 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 387

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   388 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEY 434


>UNIPROTKB|I3L6N4 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
            Uniprot:I3L6N4
        Length = 1798

 Score = 409 (149.0 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 84/169 (49%), Positives = 114/169 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   723 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 782

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   783 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 842

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R
Sbjct:   843 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 891

 Score = 218 (81.8 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   822 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 881

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   882 PQNDLQAQAR 891

 Score = 47 (21.6 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
 Identities = 21/107 (19%), Positives = 44/107 (41%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   330 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 387

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   388 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEY 434


>UNIPROTKB|I3LIS2 [details] [associations]
            symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0035064 "methylated histone residue binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
            EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
        Length = 1799

 Score = 409 (149.0 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 84/169 (49%), Positives = 114/169 (67%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   724 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 783

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   784 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD 843

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
              FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R
Sbjct:   844 HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 892

 Score = 218 (81.8 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   823 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 882

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   883 PQNDLQAQAR 892

 Score = 47 (21.6 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
 Identities = 21/107 (19%), Positives = 44/107 (41%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   331 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 388

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S         + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   389 IIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEY 435


>UNIPROTKB|F5GWX5 [details] [associations]
            symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
            IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
            ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
            Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
            Bgee:F5GWX5 Uniprot:F5GWX5
        Length = 1905

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:   982 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1041

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1042 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1101

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1102 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1158

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1159 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1210

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1211 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1244

 Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1034 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1093

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1094 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1152


>UNIPROTKB|E2RHA0 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
            Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
            Uniprot:E2RHA0
        Length = 1912

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:   989 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1048

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1049 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1108

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1109 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1165

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1166 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1217

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1218 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1251

 Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1041 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1100

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1101 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1159


>UNIPROTKB|Q14839 [details] [associations]
            symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0001103 "RNA polymerase II repressing
            transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
            Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
            HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
            Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
            EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
            RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
            PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
            PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
            IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
            DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
            Ensembl:ENST00000309577 Ensembl:ENST00000357008
            Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
            UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
            HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
            PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
            ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
            PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
            Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
        Length = 1912

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:   989 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1048

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1049 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1108

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1109 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1165

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1166 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1217

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1218 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1251

 Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1041 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1100

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1101 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1159


>UNIPROTKB|F1SLR5 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
            RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
            GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
        Length = 1912

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:   989 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1048

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1049 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1108

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1109 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1165

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1166 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1217

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1218 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1251

 Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1041 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1100

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1101 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1159


>MGI|MGI:1344380 [details] [associations]
            symbol:Chd4 "chromodomain helicase DNA binding protein 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001103 "RNA polymerase II repressing
            transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
            "cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
            "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
            "protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
            GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
            ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
            UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
            DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
            PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
            KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
            Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
            GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
        Length = 1915

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:   982 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1041

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1042 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1101

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1102 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1158

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1159 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1210

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1211 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1244

 Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1034 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1093

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1094 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1152


>UNIPROTKB|E9PU01 [details] [associations]
            symbol:Chd4 "Protein Chd4" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
            ArrayExpress:E9PU01 Uniprot:E9PU01
        Length = 1915

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:   982 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1041

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1042 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1101

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1102 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1158

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1159 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1210

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1211 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1244

 Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1034 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1093

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1094 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1152


>UNIPROTKB|J9NW81 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
            InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
            Uniprot:J9NW81
        Length = 1932

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:  1009 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1068

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1069 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1128

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1129 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1185

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1186 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1237

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1238 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1271

 Score = 215 (80.7 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1061 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1120

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1121 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1179


>UNIPROTKB|F1N3F6 [details] [associations]
            symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
            Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
        Length = 1934

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:  1011 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1070

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1071 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1130

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1131 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1187

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1188 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1239

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1240 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1273

 Score = 215 (80.7 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1063 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1122

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1123 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1181


>UNIPROTKB|F1LM59 [details] [associations]
            symbol:Chd4 "Protein Chd4" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
            InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
            ArrayExpress:F1LM59 Uniprot:F1LM59
        Length = 1945

 Score = 409 (149.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 109/276 (39%), Positives = 151/276 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L+  
Sbjct:  1010 ILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRA 1069

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L  LK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1070 SGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEA 1129

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1130 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1186

Query:   177 IKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR--LDGQTAHEDRQRQIND 234
              KK +  +    RA   + RI   A K    T     +L  R  L  +T    +Q +++D
Sbjct:  1187 NKKVMIYRFVT-RASVEE-RITQVAKKKMMLT-----HLVVRPGLGSKTGSMSKQ-ELDD 1238

Query:   235 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                 G++  +F      GG G N    D  V++  D
Sbjct:  1239 ILKFGTEE-LFKDEATDGG-GDNKEGEDSSVIHYDD 1272

 Score = 215 (80.7 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 53/119 (44%), Positives = 67/119 (56%)

Query:   168 EAKILRRGSIKKALEAKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L R S K  L  KM +  +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1062 DGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGI 1121

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1122 TGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1180


>UNIPROTKB|H0YJG4 [details] [associations]
            symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
            HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
        Length = 873

 Score = 403 (146.9 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 97/216 (44%), Positives = 129/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG--PPYTT-------DE 51
             +L K+   ++ GAG      L N +M+LRKC NHPYL +GAE      +         D 
Sbjct:   290 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDF 349

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   350 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 409

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   410 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 469

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   470 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 505

 Score = 214 (80.4 bits), Expect = 2.7e-16, P = 2.7e-16
 Identities = 52/124 (41%), Positives = 73/124 (58%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
             LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + RYLY R
Sbjct:   351 LQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 404

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             +DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ
Sbjct:   405 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 464

Query:   279 AMVR 282
             A  R
Sbjct:   465 AQAR 468


>FB|FBgn0086902 [details] [associations]
            symbol:kis "kismet" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
            specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
            response" evidence=IMP] [GO:0007298 "border follicle cell
            migration" evidence=IMP] [GO:0005875 "microtubule associated
            complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
            [GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0007614 "short-term memory"
            evidence=IMP] [GO:0046622 "positive regulation of organ growth"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
            wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
            organization" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
            EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
            GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
            GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
            GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
            KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
            UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
            EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
            CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
            PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
            Uniprot:B7Z002
        Length = 5517

 Score = 413 (150.4 bits), Expect = 1.9e-36, P = 1.9e-36
 Identities = 92/195 (47%), Positives = 122/195 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPYT-TDEH----------LVFNSGKMVVLDKLLPK 69
             L N +M+LRKC  HPYL +GAE    Y    +H          L+ ++GKMV++DKLLPK
Sbjct:  2302 LMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPK 2361

Query:    70 LKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFI 129
             LKA   RVLIFSQM R LDILEDY  +R + + R+DG+     RQ  I+ ++  GSD F+
Sbjct:  2362 LKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFV 2421

Query:   130 FMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK-KALEAKMSRY 188
             F+L T+AGGLGINL  AD V++YDSDWNPQ DLQA  R  +I +R  +K   L  + +  
Sbjct:  2422 FLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYE 2481

Query:   189 RAPFHQLRIAYGANK 203
             R  F +  +  G +K
Sbjct:  2482 REMFDKASMKLGLDK 2496

 Score = 204 (76.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             +Y + R+DG+     RQ  I+ ++  GSD F+F+L T+AGGLGINL  AD V++YDSDWN
Sbjct:  2390 KYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWN 2449

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:  2450 PQNDLQAQAR 2459

 Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query:    87 LDILEDYCYWRGFKYCRLDGQTAHE 111
             +D+ E +  +R F Y   + +T  E
Sbjct:  1877 IDVEEYFVKYRNFSYLHCEWRTEEE 1901

 Score = 37 (18.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query:   187 RYRAPFHQL 195
             +YRAPF QL
Sbjct:   396 QYRAPFPQL 404


>ZFIN|ZDB-GENE-050419-256 [details] [associations]
            symbol:chd2 "chromodomain helicase DNA binding
            protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
            Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
            Uniprot:E7F7R2
        Length = 1813

 Score = 407 (148.3 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 84/152 (55%), Positives = 107/152 (70%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDEHL---VFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH +L    E G      EHL   V   GK+V+LDKLL +LK + +RVLI
Sbjct:   758 NIVMELKKCCNHAFLIKQPEDGENDAPQEHLQSLVRGGGKLVLLDKLLTRLKDRGNRVLI 817

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL DY   + +++ RLDG    E R++ ++ FN EGS+ F F+LSTRAGGL
Sbjct:   818 FSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGL 877

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   878 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 909

 Score = 228 (85.3 bits), Expect = 2.3e-17, P = 2.3e-17
 Identities = 55/126 (43%), Positives = 78/126 (61%)

Query:   158 PQMDLQAMVREA-KILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLY 216
             PQ  LQ++VR   K++    +   L+ + +R       +R+    +   +Y   + RY +
Sbjct:   784 PQEHLQSLVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRML---DILADYLSMK-RYQF 839

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
              RLDG    E R++ ++ FN EGS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ D
Sbjct:   840 QRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 899

Query:   277 LQAMVR 282
             LQA  R
Sbjct:   900 LQAQAR 905


>DICTYBASE|DDB_G0271052 [details] [associations]
            symbol:snf2b "SNF2-related protein Snf2a"
            species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
            EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
            InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
            KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
            ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
            KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
        Length = 3247

 Score = 410 (149.4 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 85/168 (50%), Positives = 118/168 (70%)

Query:    11 NGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKL 70
             +G  KL K  L+N  +QLRK  NHPYLF   E    Y  D++L+  +GK  +LD+LLPKL
Sbjct:  1984 DGNPKLAK-GLKNTYVQLRKICNHPYLFYDDE----YNIDDNLIRYAGKFDLLDRLLPKL 2038

Query:    71 KAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIF 130
             KA   RVLIFSQMT++++ILE +  ++ +K+ RLDG T  ++R   +  FN   S+ FIF
Sbjct:  2039 KAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPNSEYFIF 2098

Query:   131 MLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             +LSTRAGGLG+NL TAD V+++DSDWNPQMDLQA  R  +I ++ +++
Sbjct:  2099 VLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVR 2146

 Score = 219 (82.2 bits), Expect = 4.1e-16, P = 4.1e-16
 Identities = 41/69 (59%), Positives = 51/69 (73%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG T  ++R   +  FN   S+ FIF+LSTRAGGLG+NL TAD V+++DSDWNP
Sbjct:  2067 YKFLRLDGSTKSDERGHLLELFNAPNSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNP 2126

Query:   274 QMDLQAMVR 282
             QMDLQA  R
Sbjct:  2127 QMDLQAQDR 2135


>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
            symbol:smarca2 "SWI/SNF related, matrix
            associated, actin dependent regulator of chromatin, subfamily a,
            member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
            HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
            UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
            GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
            ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
        Length = 1568

 Score = 406 (148.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 108/270 (40%), Positives = 143/270 (52%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP------GPP--YTTDEHL 53
             +L+ D    +  GK     L N +MQL+K  NHPY+F   E       G P    +   L
Sbjct:   988 ILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPDL 1047

Query:    54 VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKLKA   RVL+F QMT ++ ILEDY  +R F Y RLDG T  EDR
Sbjct:  1048 YRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDR 1107

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN EGS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1108 AMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1167

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDG- 221
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+  
Sbjct:  1168 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1226

Query:   222 -QTAHEDR---QRQINDFNMEGSDIF-IFM 246
              Q   ED       +N       D F +FM
Sbjct:  1227 EQNMEEDEVPDDETLNQMIARNEDEFELFM 1256

 Score = 230 (86.0 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 44/69 (63%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             +LY RLDG T  EDR   +  FN EGS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP
Sbjct:  1093 FLYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNP 1152

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1153 HQDLQAQDR 1161


>ZFIN|ZDB-GENE-041111-187 [details] [associations]
            symbol:chd4a "chromodomain helicase DNA binding
            protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
            IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
            Bgee:F1QWV5 Uniprot:F1QWV5
        Length = 1930

 Score = 407 (148.3 bits), Expect = 2.3e-36, P = 2.3e-36
 Identities = 90/186 (48%), Positives = 118/186 (63%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------PGPPYTTDEHLVF 55
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A       P   Y     L  
Sbjct:   973 ILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPAAAMEAAKMPNGMYEGGG-LTK 1031

Query:    56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
             +SGK+++L K+L KLK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ 
Sbjct:  1032 SSGKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQE 1091

Query:   116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRG 175
              I+ FN  G+  F+F+LSTRAGGLGINLATAD VV+YDSDWNP  D+QA  R  +I   G
Sbjct:  1092 AIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRI---G 1148

Query:   176 SIKKAL 181
               KK +
Sbjct:  1149 QNKKVM 1154

 Score = 223 (83.6 bits), Expect = 8.4e-17, P = 8.4e-17
 Identities = 66/164 (40%), Positives = 87/164 (53%)

Query:   132 LSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI---------LRRGSIKKALE 182
             L+TR GG  ++L    V+ L     +P +   A +  AK+         L + S K  L 
Sbjct:   981 LNTRGGGNQVSLLNV-VMDLKKCCNHPYLFPAAAMEAAKMPNGMYEGGGLTKSSGKLLLL 1039

Query:   183 AKMSR-YRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQTAHEDRQRQINDFNME 238
              KM R  +   H++ I     K  +  E   E + Y Y R+DG      RQ  I+ FN  
Sbjct:  1040 QKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAP 1099

Query:   239 GSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             G+  F+F+LSTRAGGLGINLATAD VV+YDSDWNP  D+QA  R
Sbjct:  1100 GAPQFVFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSR 1143


>RGD|1306794 [details] [associations]
            symbol:Chd1 "chromodomain helicase DNA binding protein 1"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
            [GO:0035064 "methylated histone residue binding" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
            IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
            Uniprot:D4AAG9
        Length = 904

 Score = 400 (145.9 bits), Expect = 3.3e-36, P = 3.3e-36
 Identities = 84/173 (48%), Positives = 115/173 (66%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSG 58
             +L ++   ++   K       NI+M+L+KC NH YL    +    Y   E   HL+ +SG
Sbjct:   727 ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSG 786

Query:    59 KMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIN 118
             K+++LDKLL +L+ + +RVLIFSQM RMLDIL +Y  +R F + RLDG    E R++ ++
Sbjct:   787 KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIG-ELRRQALD 845

Query:   119 DFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
              FN  GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   846 HFNAXGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI 898

 Score = 206 (77.6 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
 Identities = 41/70 (58%), Positives = 53/70 (75%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ + RLDG    E R++ ++ FN  GS+ F F+LSTRAGGLGINLA+AD VV++DSDWN
Sbjct:   826 QFPFQRLDGSIG-ELRRQALDHFNAXGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 884

Query:   273 PQMDLQAMVR 282
             PQ DLQA  R
Sbjct:   885 PQNDLQAQAR 894

 Score = 50 (22.7 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
 Identities = 21/107 (19%), Positives = 45/107 (42%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESR 76
             E ++ QN+   ++K  N+       +      + E + + + +  + D L  + +  E R
Sbjct:   334 ETLKQQNV-RGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVE-R 391

Query:    77 VLIFSQMTRMLDILEDYCYWRGFKY--CRL-DGQTAHEDRQRQINDF 120
             ++  S       + + YC W+G  Y  C   DG    +  Q  I+++
Sbjct:   392 IIAHSNQKSAAGLPDYYCKWQGLPYSECSWEDGALISKKFQTCIDEY 438


>TAIR|locus:2150270 [details] [associations]
            symbol:CHR23 "chromatin remodeling 23" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
            "sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
            evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
            "protein ubiquitination" evidence=RCA] [GO:0016571 "histone
            methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
            evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
            evidence=RCA] [GO:0033044 "regulation of chromosome organization"
            evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
            OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
            ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
            EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
            PhylomeDB:F4K128 Uniprot:F4K128
        Length = 1064

 Score = 401 (146.2 bits), Expect = 3.7e-36, P = 3.7e-36
 Identities = 83/168 (49%), Positives = 110/168 (65%)

Query:    11 NGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKL 70
             +G GK +   LQN+ MQLRKC NHPYLF GA+          +V  SGK  +LD+LLPKL
Sbjct:   652 SGNGKSKS--LQNLTMQLRKCCNHPYLFVGADYN--MCKKPEIVRASGKFELLDRLLPKL 707

Query:    71 KAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIF 130
             K    R+L+FSQMTR++D+LE Y     + Y RLDG T  + R   +  FN   S  F+F
Sbjct:   708 KKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMF 767

Query:   131 MLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             +LSTRAGGLG+NL TAD ++++DSDWNPQMD QA  R  +I ++  ++
Sbjct:   768 LLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVR 815

 Score = 209 (78.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 38/66 (57%), Positives = 48/66 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y+Y RLDG T  + R   +  FN   S  F+F+LSTRAGGLG+NL TAD ++++DSDWNP
Sbjct:   736 YMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNP 795

Query:   274 QMDLQA 279
             QMD QA
Sbjct:   796 QMDQQA 801

 Score = 38 (18.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query:   176 SIKKALEAKMSRYRAPFHQLR-IAYGANKGKNYTEEEDRYLYCRLD 220
             S+     A +S   +P   LR  +Y  N+G   +E ED  L  RL+
Sbjct:    40 SVSSIYHASVSDL-SPSPPLRGNSYTPNRGDLMSEFEDALLQQRLN 84


>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
            symbol:chd4b "chromodomain helicase DNA binding
            protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
            IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
            Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
            KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
        Length = 1953

 Score = 405 (147.6 bits), Expect = 3.8e-36, P = 3.8e-36
 Identities = 88/185 (47%), Positives = 117/185 (63%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD-----EHLVFN 56
             +L ++ + +N  G   ++ L N++M L+KC NHPYLF  A    P   +       L   
Sbjct:   999 ILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPTAATEAPKMPNGMYDGSALTKA 1058

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             SGK+++L K+L KLK    RVLIFSQMT+MLD+LED+    G+KY R+DG      RQ  
Sbjct:  1059 SGKLMLLFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEA 1118

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R  +I   G 
Sbjct:  1119 IDRFNAPGAPQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI---GQ 1175

Query:   177 IKKAL 181
              KK +
Sbjct:  1176 NKKVM 1180

 Score = 217 (81.4 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 52/119 (43%), Positives = 68/119 (57%)

Query:   168 EAKILRRGSIKKALEAKM-SRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             +   L + S K  L  KM  + +   H++ I     K  +  E   E + Y Y R+DG  
Sbjct:  1051 DGSALTKASGKLMLLFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGV 1110

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 RQ  I+ FN  G+  F+F+LSTRAGGLGINLATAD V++YDSDWNP  D+QA  R
Sbjct:  1111 TGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1169


>UNIPROTKB|E1BS47 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
            IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
            Uniprot:E1BS47
        Length = 1326

 Score = 402 (146.6 bits), Expect = 4.3e-36, P = 4.3e-36
 Identities = 95/216 (43%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTD---- 50
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE          +  D    
Sbjct:   407 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 466

Query:    51 --EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   467 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 526

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   527 RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 586

Query:   169 AKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:   587 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 622

 Score = 210 (79.0 bits), Expect = 3.9e-15, P = 3.9e-15
 Identities = 51/134 (38%), Positives = 78/134 (58%)

Query:   152 YDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE- 210
             +++D +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+ 
Sbjct:   459 HNAD-SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY 511

Query:   211 --EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
               + RY Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++D
Sbjct:   512 LIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFD 571

Query:   269 SDWNPQMDLQAMVR 282
             SDWNPQ DLQA  R
Sbjct:   572 SDWNPQNDLQAQAR 585


>UNIPROTKB|B5DE69 [details] [associations]
            symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
            evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
            GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
            KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
            GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
            Uniprot:B5DE69
        Length = 2184

 Score = 405 (147.6 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 96/216 (44%), Positives = 127/216 (58%)

Query:     2 VLMKDID-VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDE 51
             +L K+   +  GA +     L N +M+LRKC NHPYL  GAE           P    D 
Sbjct:  1008 ILEKNFSFLTKGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDF 1067

Query:    52 H---LVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             H   +V +SGK+V++DKLLPKL+A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1068 HVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1127

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1128 RGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1187

Query:   169 AKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1188 HRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDK 1223

 Score = 218 (81.8 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 52/128 (40%), Positives = 74/128 (57%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   +QAMVR +     G +   ++  + + RA  H++ I     +  +  E+   + RY
Sbjct:  1065 PDFHVQAMVRSS-----GKLV-LIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRY 1118

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
             LY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:  1119 LYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1178

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:  1179 NDLQAQAR 1186


>SGD|S000001388 [details] [associations]
            symbol:STH1 "ATPase component of the RSC chromatin remodeling
            complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
            "nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
            disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
            evidence=IMP] [GO:0007010 "cytoskeleton organization"
            evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
            evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
            [GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
            [GO:0006368 "transcription elongation from RNA polymerase II
            promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
            evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
            GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
            EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
            GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
            EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
            PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
            GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
            EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
            SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
            STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
            GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
            NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
            Uniprot:P32597
        Length = 1359

 Score = 402 (146.6 bits), Expect = 4.5e-36, P = 4.5e-36
 Identities = 95/236 (40%), Positives = 135/236 (57%)

Query:    12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGP-PYTTDEHLVFN-SGKMVVLDKLLPK 69
             GA K     L N +MQLRK  NHP++FD  E    P   +  L+F  +GK  +LD++LPK
Sbjct:   743 GATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPK 802

Query:    70 LKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFI 129
              KA   RVL+F QMT+++DI+ED+   +  KY RLDG T  E+R   +N FN   SD F 
Sbjct:   803 FKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFC 862

Query:   130 FMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR--------EAKILRRGSIKKAL 181
             F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R        E +ILR  +     
Sbjct:   863 FLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVE 922

Query:   182 EAKMSR--YRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQR-QIND 234
             E  + R   +       I  G    K+  EE++ +L   ++ +T  +D  + +++D
Sbjct:   923 EVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDD 978

 Score = 220 (82.5 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 45/105 (42%), Positives = 65/105 (61%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYL---YCRLDGQTAHEDRQRQINDFNM 237
             L+  + +++A  H++ + +   +  +  E+  R     Y RLDG T  E+R   +N FN 
Sbjct:   796 LDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNA 855

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
               SD F F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R
Sbjct:   856 PDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 900


>ASPGD|ASPL0000042729 [details] [associations]
            symbol:AN2278 species:162425 "Emericella nidulans"
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
            SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
            GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
            ProteinModelPortal:Q5BB02 STRING:Q5BB02
            EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
            OMA:GSDHSSP Uniprot:Q5BB02
        Length = 1407

 Score = 402 (146.6 bits), Expect = 4.8e-36, P = 4.8e-36
 Identities = 98/247 (39%), Positives = 141/247 (57%)

Query:     9 VVNGAGKLEKMR-LQNILMQLRKCSNHPYLFDGAEP--GPPYTTDEHLVFNSGKMVVLDK 65
             V +G G    MR L N+LMQLRK  NHP++F+  E    P   T++ +   +GK  +LD+
Sbjct:   804 VSDGKGGKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDLIWRTAGKFELLDR 863

Query:    66 LLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGS 125
             +LPK KA   RVL+F QMT++++I+ED+   RG KY RLDG T  +DR   +  FN   S
Sbjct:   864 ILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPDS 923

Query:   126 DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK------- 178
             + F F+LSTRAGGLG+NL TAD V+++DSDWNP  DLQA  R  +I ++  ++       
Sbjct:   924 EYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITS 983

Query:   179 KALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQINDF 235
              ++E K+   ++++       I  G    K+  EE D  L   L+  TA    Q    D 
Sbjct:   984 NSVEEKILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLE--TAEGTDQAGDQD- 1040

Query:   236 NMEGSDI 242
              M+  D+
Sbjct:  1041 EMDDDDL 1047

 Score = 213 (80.0 bits), Expect = 6.6e-16, P = 6.6e-16
 Identities = 45/105 (42%), Positives = 64/105 (60%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYL---YCRLDGQTAHEDRQRQINDFNM 237
             L+  + +++A  H++ + +   +  N  E+  R     Y RLDG T  +DR   +  FN 
Sbjct:   861 LDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNA 920

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
               S+ F F+LSTRAGGLG+NL TAD V+++DSDWNP  DLQA  R
Sbjct:   921 PDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDR 965


>TAIR|locus:2062840 [details] [associations]
            symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
            boundary specification between lateral organs and the meristem"
            evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=NAS] [GO:0040029 "regulation of gene expression,
            epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
            evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
            "microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
            "cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
            "DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
            evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
            [GO:0009616 "virus induced gene silencing" evidence=RCA]
            [GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=RCA] [GO:0009845
            "seed germination" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0009933 "meristem structural
            organization" evidence=RCA] [GO:0010162 "seed dormancy process"
            evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0010267 "production of
            ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
            "protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
            evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=RCA] [GO:0050826 "response to
            freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
            GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
            PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
            PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
            KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
        Length = 3574

 Score = 407 (148.3 bits), Expect = 5.0e-36, P = 5.0e-36
 Identities = 99/241 (41%), Positives = 137/241 (56%)

Query:     2 VLMKDI-DVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEH----LVFN 56
             +LMK + D +   G  +   + N +M+LR   NHPYL             +H    +V  
Sbjct:  1012 LLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRL 1071

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
              GK+ +LD++LPKLKA + RVL FS MTR+LD++EDY   +G+KY RLDGQT+  DR   
Sbjct:  1072 CGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGAL 1131

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGS 176
             I+ FN  GS  FIF+LS RAGG+G+NL  AD V+L+D+DWNPQ+DLQA  R  +I ++  
Sbjct:  1132 IDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKD 1191

Query:   177 IK----KALEAKMSRYRAPF-HQLRIA-YGANKG--KNYTEEEDR--YLYCRLDGQTAHE 226
             +     + + +   + RA   H+L +A      G   N T  EDR  YL   L      E
Sbjct:  1192 VLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLESLLRESKKEE 1251

Query:   227 D 227
             D
Sbjct:  1252 D 1252

 Score = 225 (84.3 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDGQT+  DR   I+ FN  GS  FIF+LS RAGG+G+NL  AD V+L+D+DWNP
Sbjct:  1114 YKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNP 1173

Query:   274 QMDLQAMVR 282
             Q+DLQA  R
Sbjct:  1174 QVDLQAQAR 1182

 Score = 45 (20.9 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
 Identities = 16/88 (18%), Positives = 39/88 (44%)

Query:     8 DVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN-SGKMVVLDKL 66
             ++V   G ++   L    +QL +  +        +P P YT  +  +     K +++D+ 
Sbjct:   424 EMVGWTGVIKTNDLSTSAVQLDEFHSSDEEEGNLQPSPKYTMSQKWIMGRQNKRLLVDRS 483

Query:    67 --LPKLKAQESRVLIFSQMTRMLDILED 92
               L + KA ++    F+++   + + +D
Sbjct:   484 WSLKQQKADQAIGSRFNELKESVSLSDD 511

 Score = 38 (18.4 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
 Identities = 12/53 (22%), Positives = 25/53 (47%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRY 214
             L + ++EAK+L      +A E + S        +     +++ K+Y E  ++Y
Sbjct:   679 LGSKLKEAKLLTSRFENEADETRTSNATDDETLIENEDESDQAKHYLESNEKY 731


>DICTYBASE|DDB_G0284171 [details] [associations]
            symbol:DDB_G0284171 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
            KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
            STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
            KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
            ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
        Length = 1917

 Score = 403 (146.9 bits), Expect = 6.0e-36, P = 6.0e-36
 Identities = 89/180 (49%), Positives = 117/180 (65%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA----EPGPPYTTDEHLVFNS 57
             +L K+   +N  GK EK  L NI+ +L+K  NHPYL+  A    E G     D  ++  S
Sbjct:  1007 ILTKNFQELN-KGKGEKTTLLNIMTELKKTCNHPYLYQNARDECELGAKDLLDS-MIRAS 1064

Query:    58 GKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQI 117
             GK+V+LDKLL +LK    RVLIFSQM RMLDIL DY   R F++ RLDG  + E R + +
Sbjct:  1065 GKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAM 1124

Query:   118 NDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
             + FN   S  F F+LST+AGGLGINL+TAD V+++DSDWNPQ DLQA  R  +I ++  +
Sbjct:  1125 DRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHV 1184

 Score = 200 (75.5 bits), Expect = 3.7e-13, P = 3.7e-13
 Identities = 38/69 (55%), Positives = 50/69 (72%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + + RLDG  + E R + ++ FN   S  F F+LST+AGGLGINL+TAD V+++DSDWNP
Sbjct:  1106 FQFQRLDGSMSREKRSQAMDRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNP 1165

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:  1166 QNDLQAEAR 1174


>UNIPROTKB|E2QUR1 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
            Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
        Length = 2200

 Score = 403 (146.9 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 97/216 (44%), Positives = 129/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG--PPYTT-------DE 51
             +L K+   ++ GAG      L N +M+LRKC NHPYL +GAE      +         D 
Sbjct:   681 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDF 740

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   741 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 800

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   801 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 860

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   861 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 896

 Score = 214 (80.4 bits), Expect = 8.9e-16, P = 8.9e-16
 Identities = 52/124 (41%), Positives = 73/124 (58%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
             LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + RYLY R
Sbjct:   742 LQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 795

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             +DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ
Sbjct:   796 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 855

Query:   279 AMVR 282
             A  R
Sbjct:   856 AQAR 859


>RGD|620696 [details] [associations]
            symbol:Chd8 "chromodomain helicase DNA binding protein 8"
            species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
            evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
            [GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
            "negative regulation of Wnt receptor signaling pathway"
            evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
            [GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
            [GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO;ISS]
            [GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter" evidence=ISO;ISS]
            [GO:0060070 "canonical Wnt receptor signaling pathway"
            evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
            evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
            GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
            GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
            HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
            EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
            UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
            Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
            UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
        Length = 2581

 Score = 403 (146.9 bits), Expect = 8.9e-36, P = 8.9e-36
 Identities = 97/216 (44%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDE 51
             +L K+   ++ GAG      L N +M+LRKC NHPYL +GAE                D 
Sbjct:  1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDF 1123

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1124 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1183

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1184 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1243

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1244 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 1279

 Score = 216 (81.1 bits), Expect = 6.5e-16, P = 6.5e-16
 Identities = 54/129 (41%), Positives = 75/129 (58%)

Query:   158 PQ-MDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDR 213
             PQ   LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + R
Sbjct:  1120 PQDFHLQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR 1173

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             YLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNP
Sbjct:  1174 YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1233

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:  1234 QNDLQAQAR 1242


>UNIPROTKB|Q9HCK8 [details] [associations]
            symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
            species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
            domain binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IDA]
            [GO:0030178 "negative regulation of Wnt receptor signaling pathway"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
            "methylated histone residue binding" evidence=IDA] [GO:0045945
            "positive regulation of transcription from RNA polymerase III
            promoter" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
            [GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
            binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
            [GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
            unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
            GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
            GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
            GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
            PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
            EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
            EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
            EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
            IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
            RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
            PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
            STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
            PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
            Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
            UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
            HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
            KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
            NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
            Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
        Length = 2581

 Score = 403 (146.9 bits), Expect = 8.9e-36, P = 8.9e-36
 Identities = 97/216 (44%), Positives = 129/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG--PPYTT-------DE 51
             +L K+   ++ GAG      L N +M+LRKC NHPYL +GAE      +         D 
Sbjct:  1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDF 1123

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1124 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1183

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1184 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1243

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1244 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 1279

 Score = 214 (80.4 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 52/124 (41%), Positives = 73/124 (58%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
             LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + RYLY R
Sbjct:  1125 LQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             +DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ
Sbjct:  1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1238

Query:   279 AMVR 282
             A  R
Sbjct:  1239 AQAR 1242


>MGI|MGI:1915022 [details] [associations]
            symbol:Chd8 "chromodomain helicase DNA binding protein 8"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
            pathway" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
            signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
            evidence=ISO] [GO:0035064 "methylated histone residue binding"
            evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0045945 "positive regulation of transcription
            from RNA polymerase III promoter" evidence=ISO] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=ISO]
            [GO:0070016 "armadillo repeat domain binding" evidence=ISO]
            [GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
            GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
            HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
            HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
            OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
            IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
            UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
            IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
            PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
            UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
            NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
        Length = 2582

 Score = 403 (146.9 bits), Expect = 8.9e-36, P = 8.9e-36
 Identities = 97/216 (44%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDE 51
             +L K+   ++ GAG      L N +M+LRKC NHPYL +GAE                D 
Sbjct:  1066 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDF 1125

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1126 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1185

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1186 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1245

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1246 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 1281

 Score = 216 (81.1 bits), Expect = 6.5e-16, P = 6.5e-16
 Identities = 54/129 (41%), Positives = 75/129 (58%)

Query:   158 PQ-MDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDR 213
             PQ   LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + R
Sbjct:  1122 PQDFHLQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR 1175

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             YLY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNP
Sbjct:  1176 YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1235

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:  1236 QNDLQAQAR 1244


>UNIPROTKB|F1NSG3 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
            nerve development" evidence=IEA] [GO:0030217 "T cell
            differentiation" evidence=IEA] [GO:0030540 "female genitalia
            development" evidence=IEA] [GO:0035116 "embryonic hindlimb
            morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=IEA] [GO:0043584 "nose
            development" evidence=IEA] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0060041 "retina development
            in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
            hormone secretion" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0007628 "adult
            walking behavior" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
            OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
            EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
            ArrayExpress:F1NSG3 Uniprot:F1NSG3
        Length = 2248

 Score = 402 (146.6 bits), Expect = 9.5e-36, P = 9.5e-36
 Identities = 95/216 (43%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTD---- 50
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE          +  D    
Sbjct:   459 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 518

Query:    51 --EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   519 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 578

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   579 RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 638

Query:   169 AKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:   639 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 674

 Score = 210 (79.0 bits), Expect = 7.3e-15, P = 7.3e-15
 Identities = 51/134 (38%), Positives = 78/134 (58%)

Query:   152 YDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE- 210
             +++D +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+ 
Sbjct:   511 HNAD-SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY 563

Query:   211 --EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
               + RY Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++D
Sbjct:   564 LIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFD 623

Query:   269 SDWNPQMDLQAMVR 282
             SDWNPQ DLQA  R
Sbjct:   624 SDWNPQNDLQAQAR 637


>TAIR|locus:2040184 [details] [associations]
            symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
            auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
            root development" evidence=IMP] [GO:0009788 "negative regulation of
            abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
            "methylation-dependent chromatin silencing" evidence=RCA]
            [GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
            proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
            stimulus" evidence=IMP] [GO:0048364 "root development"
            evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
            SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
            GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
            GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
            GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
            PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
            InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
            EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
            PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
            ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
            PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
            KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
            PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
            GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
        Length = 1384

 Score = 399 (145.5 bits), Expect = 9.8e-36, P = 9.8e-36
 Identities = 89/223 (39%), Positives = 138/223 (61%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTD--EHLVFNSGK 59
             +  ++  V+   G  + + L NI+M+LRK   HPY+ +G EP      +  + L+ + GK
Sbjct:   538 IFTRNYQVLTKKGGAQ-ISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGK 596

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             + +LDK++ KLK Q  RVLI++Q   MLD+LEDYC  + ++Y R+DG+    +RQ +I+ 
Sbjct:   597 LQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDR 656

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI-------- 171
             FN + S+ F F+LSTRAGGLGINLATAD V++YDSDWNP  DLQAM R  ++        
Sbjct:   657 FNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMI 716

Query:   172 ---LRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE 211
                + RG+I++ +  ++++ +     L +  G  K +N  +EE
Sbjct:   717 YRLINRGTIEERM-MQLTKKKMVLEHLVV--GKLKTQNINQEE 756

 Score = 223 (83.6 bits), Expect = 5.6e-17, P = 5.6e-17
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ Y R+DG+    +RQ +I+ FN + S+ F F+LSTRAGGLGINLATAD V++YDSDWN
Sbjct:   635 KWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWN 694

Query:   273 PQMDLQAMVR 282
             P  DLQAM R
Sbjct:   695 PHADLQAMAR 704


>RGD|1311921 [details] [associations]
            symbol:Chd7 "chromodomain helicase DNA binding protein 7"
            species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
            development" evidence=IEA;ISO] [GO:0001568 "blood vessel
            development" evidence=ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
            evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
            nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
            heart development" evidence=IEA;ISO] [GO:0007605 "sensory
            perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
            behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
            evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
            [GO:0021545 "cranial nerve development" evidence=IEA;ISO]
            [GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
            "female genitalia development" evidence=IEA;ISO] [GO:0035116
            "embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
            "positive regulation of multicellular organism growth"
            evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
            [GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
            "camera-type eye development" evidence=ISO] [GO:0043584 "nose
            development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
            development" evidence=ISO] [GO:0048844 "artery morphogenesis"
            evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
            [GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
            "retina development in camera-type eye" evidence=IEA;ISO]
            [GO:0060123 "regulation of growth hormone secretion"
            evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
            [GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
            GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
            GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
            GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
            GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
            GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
            CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
            RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
            GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
        Length = 2985

 Score = 403 (146.9 bits), Expect = 1.1e-35, P = 1.1e-35
 Identities = 95/216 (43%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTD---- 50
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE          +  D    
Sbjct:  1210 ILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKDAHNADSPDF 1269

Query:    51 --EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1270 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1329

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1330 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1389

Query:   169 AKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:  1390 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 1425

 Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 51/134 (38%), Positives = 78/134 (58%)

Query:   152 YDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE- 210
             +++D +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+ 
Sbjct:  1262 HNAD-SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY 1314

Query:   211 --EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
               + RY Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++D
Sbjct:  1315 LIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFD 1374

Query:   269 SDWNPQMDLQAMVR 282
             SDWNPQ DLQA  R
Sbjct:  1375 SDWNPQNDLQAQAR 1388


>UNIPROTKB|F1PWD8 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
            EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
            GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
        Length = 2994

 Score = 403 (146.9 bits), Expect = 1.1e-35, P = 1.1e-35
 Identities = 95/216 (43%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTD---- 50
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE          +  D    
Sbjct:  1220 ILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 1279

Query:    51 --EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1280 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1339

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1340 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1399

Query:   169 AKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:  1400 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 1435

 Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 51/134 (38%), Positives = 78/134 (58%)

Query:   152 YDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE- 210
             +++D +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+ 
Sbjct:  1272 HNAD-SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY 1324

Query:   211 --EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
               + RY Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++D
Sbjct:  1325 LIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFD 1384

Query:   269 SDWNPQMDLQAMVR 282
             SDWNPQ DLQA  R
Sbjct:  1385 SDWNPQNDLQAQAR 1398


>UNIPROTKB|D4A4J2 [details] [associations]
            symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
            SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
            Uniprot:D4A4J2
        Length = 1506

 Score = 399 (145.5 bits), Expect = 1.1e-35, P = 1.1e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   993 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1052

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1053 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1112

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1113 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1172

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1173 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1231

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1232 EENEEEDEVPDD 1243

 Score = 226 (84.6 bits), Expect = 3.0e-17, P = 3.0e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1046 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1103

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1104 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1163

Query:   280 MVR 282
               R
Sbjct:  1164 QDR 1166


>UNIPROTKB|A5PKK5 [details] [associations]
            symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
            [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=IEA] [GO:0030308 "negative regulation of
            cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IEA] [GO:0000790
            "nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
            GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
            GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
            OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
            EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
            RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
            Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
            InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
        Length = 1554

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   968 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1027

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1028 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1087

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1088 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1147

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1148 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1206

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1207 EENEEEDEVPDD 1218

 Score = 226 (84.6 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1021 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1078

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1079 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1138

Query:   280 MVR 282
               R
Sbjct:  1139 QDR 1141


>UNIPROTKB|E2RKP4 [details] [associations]
            symbol:SMARCA2 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
            [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
            complex" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0035887 "aortic smooth muscle cell differentiation"
            evidence=IEA] [GO:0030308 "negative regulation of cell growth"
            evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
            GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
            GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
            GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
            EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
            Uniprot:E2RKP4
        Length = 1556

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   970 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1029

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1030 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1089

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1090 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1149

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1150 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1208

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1209 EENEEEDEVPDD 1220

 Score = 226 (84.6 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1023 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1080

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1081 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1140

Query:   280 MVR 282
               R
Sbjct:  1141 QDR 1143


>UNIPROTKB|F1SJG5 [details] [associations]
            symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=IEA] [GO:0030308 "negative regulation of
            cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IEA] [GO:0000790
            "nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
            GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
            GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
            EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
            Uniprot:F1SJG5
        Length = 1556

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   970 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1029

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1030 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1089

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1090 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1149

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1150 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1208

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1209 EENEEEDEVPDD 1220

 Score = 226 (84.6 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1023 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1080

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1081 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1140

Query:   280 MVR 282
               R
Sbjct:  1141 QDR 1143


>UNIPROTKB|J9P5P2 [details] [associations]
            symbol:SMARCA2 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
            Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
            Uniprot:J9P5P2
        Length = 1574

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   970 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1029

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1030 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1089

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1090 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1149

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1150 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1208

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1209 EENEEEDEVPDD 1220

 Score = 226 (84.6 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1023 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1080

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1081 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1140

Query:   280 MVR 282
               R
Sbjct:  1141 QDR 1143


>MGI|MGI:99603 [details] [associations]
            symbol:Smarca2 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0006325 "chromatin organization"
            evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
            evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0035887 "aortic smooth muscle cell differentiation"
            evidence=IMP] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
            evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
            "WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
            GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
            GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
            GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
            GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
            ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
            EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
            ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
            PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
            KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
            NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
        Length = 1577

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   991 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1050

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1051 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1110

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1111 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1170

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1171 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1229

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1230 EENEEEDEVPDD 1241

 Score = 226 (84.6 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1044 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1101

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1102 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1161

Query:   280 MVR 282
               R
Sbjct:  1162 QDR 1164


>UNIPROTKB|P51531 [details] [associations]
            symbol:SMARCA2 "Probable global transcription activator
            SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
            smooth muscle cell differentiation" evidence=IEA] [GO:0016514
            "SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
            evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
            polymerase II transcription coactivator activity" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IDA] [GO:0003713
            "transcription coactivator activity" evidence=TAS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
            complex" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
            chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
            growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
            evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=TAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
            filament cytoskeleton" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
            GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
            GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
            GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
            Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
            IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
            RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
            PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
            IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
            DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
            Ensembl:ENST00000349721 Ensembl:ENST00000357248
            Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
            KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
            GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
            MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
            HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
            OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
            GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
            Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
            GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
        Length = 1590

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   986 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1045

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1046 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1105

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1106 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1165

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1166 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1224

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1225 EENEEEDEVPDD 1236

 Score = 226 (84.6 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1039 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1096

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1097 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1156

Query:   280 MVR 282
               R
Sbjct:  1157 QDR 1159


>RGD|1302988 [details] [associations]
            symbol:Smarca2 "SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 2"
            species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
            evidence=ISO] [GO:0001105 "RNA polymerase II transcription
            coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
            evidence=ISO] [GO:0030308 "negative regulation of cell growth"
            evidence=ISO] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=ISO] [GO:0043231 "intracellular
            membrane-bounded organelle" evidence=ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=ISO]
            [GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
            complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
            OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
            RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
            SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
            UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
            Genevestigator:Q6DUH4 Uniprot:Q6DUH4
        Length = 1597

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   993 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1052

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1053 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1112

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1113 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1172

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1173 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1231

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1232 EENEEEDEVPDD 1243

 Score = 226 (84.6 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1046 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1103

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1104 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1163

Query:   280 MVR 282
               R
Sbjct:  1164 QDR 1166


>UNIPROTKB|E9PTG1 [details] [associations]
            symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
            norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0001105 "RNA polymerase II transcription coactivator activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0016514
            "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
            cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
            complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
            SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
            GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
            GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
            GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
            Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
        Length = 1597

 Score = 399 (145.5 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/252 (39%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   993 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1052

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1053 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1112

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA  R      
Sbjct:  1113 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ 1172

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1173 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1231

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1232 EENEEEDEVPDD 1243

 Score = 226 (84.6 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 53/123 (43%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1046 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1103

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD VV++DSDWNP  DLQA
Sbjct:  1104 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA 1163

Query:   280 MVR 282
               R
Sbjct:  1164 QDR 1166


>UNIPROTKB|E1BPM4 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
            "regulation of growth hormone secretion" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0050890 "cognition"
            evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
            [GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030540 "female genitalia development" evidence=IEA]
            [GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
            "cranial nerve development" evidence=IEA] [GO:0008015 "blood
            circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
            evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
            utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
            system development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
            GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
            GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
            EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
            Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
        Length = 2940

 Score = 402 (146.6 bits), Expect = 1.3e-35, P = 1.3e-35
 Identities = 95/216 (43%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTD---- 50
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE          +  D    
Sbjct:  1171 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 1230

Query:    51 --EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1231 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1290

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1291 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1350

Query:   169 AKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:  1351 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 1386

 Score = 210 (79.0 bits), Expect = 9.8e-15, P = 9.8e-15
 Identities = 51/134 (38%), Positives = 78/134 (58%)

Query:   152 YDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE- 210
             +++D +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+ 
Sbjct:  1223 HNAD-SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY 1275

Query:   211 --EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
               + RY Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++D
Sbjct:  1276 LIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFD 1335

Query:   269 SDWNPQMDLQAMVR 282
             SDWNPQ DLQA  R
Sbjct:  1336 SDWNPQNDLQAQAR 1349


>MGI|MGI:2444748 [details] [associations]
            symbol:Chd7 "chromodomain helicase DNA binding protein 7"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
            [GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
            [GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
            nervous system development" evidence=ISO] [GO:0007512 "adult heart
            development" evidence=IMP] [GO:0007605 "sensory perception of
            sound" evidence=IMP] [GO:0007626 "locomotory behavior"
            evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
            [GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
            development" evidence=ISO] [GO:0030217 "T cell differentiation"
            evidence=ISO] [GO:0030540 "female genitalia development"
            evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IMP] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis"
            evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
            [GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
            "artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
            evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
            [GO:0060041 "retina development in camera-type eye" evidence=ISO]
            [GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
            [GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
            development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
            GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
            GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
            GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
            CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
            OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
            EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
            EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
            IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
            ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
            PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
            Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
            Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
            UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
            InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
            Genevestigator:A2AJK6 Uniprot:A2AJK6
        Length = 2986

 Score = 402 (146.6 bits), Expect = 1.4e-35, P = 1.4e-35
 Identities = 95/217 (43%), Positives = 128/217 (58%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP-------------GPPY 47
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE               P +
Sbjct:  1211 ILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDF 1270

Query:    48 TTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQ 107
                + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+
Sbjct:  1271 QL-QAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGR 1329

Query:   108 TAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
                  RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R
Sbjct:  1330 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1389

Query:   168 EAKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
               +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:  1390 CHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 1426

 Score = 209 (78.6 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 50/129 (38%), Positives = 74/129 (57%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDR 213
             +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+   + R
Sbjct:  1267 SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRR 1320

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNP
Sbjct:  1321 YPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1380

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:  1381 QNDLQAQAR 1389


>UNIPROTKB|Q9P2D1 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
            "sensory perception of sound" evidence=IEA] [GO:0007628 "adult
            walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
            evidence=IEA] [GO:0030540 "female genitalia development"
            evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IEA] [GO:0048752 "semicircular canal
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
            development" evidence=IMP] [GO:0003007 "heart morphogenesis"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
            [GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
            development" evidence=IMP] [GO:0060021 "palate development"
            evidence=IMP] [GO:0060041 "retina development in camera-type eye"
            evidence=IMP] [GO:0001501 "skeletal system development"
            evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
            "central nervous system development" evidence=IMP] [GO:0021545
            "cranial nerve development" evidence=IMP] [GO:0060123 "regulation
            of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
            binding" evidence=TAS] [GO:0030217 "T cell differentiation"
            evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0060324 "face development" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
            GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
            GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
            GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
            GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
            GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
            KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
            EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
            EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
            EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
            UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
            PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
            SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
            PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
            Ensembl:ENST00000307121 Ensembl:ENST00000423902
            Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
            GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
            MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
            Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
            OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
            ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
            Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
            GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
        Length = 2997

 Score = 402 (146.6 bits), Expect = 1.4e-35, P = 1.4e-35
 Identities = 95/217 (43%), Positives = 128/217 (58%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP-------------GPPY 47
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE               P +
Sbjct:  1221 ILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDF 1280

Query:    48 TTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQ 107
                + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+
Sbjct:  1281 QL-QAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGR 1339

Query:   108 TAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
                  RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R
Sbjct:  1340 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1399

Query:   168 EAKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
               +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:  1400 CHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 1436

 Score = 209 (78.6 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 50/129 (38%), Positives = 74/129 (57%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDR 213
             +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+   + R
Sbjct:  1277 SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRR 1330

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNP
Sbjct:  1331 YPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1390

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:  1391 QNDLQAQAR 1399


>UNIPROTKB|Q06A37 [details] [associations]
            symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
            species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
            RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
            SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
            HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
            NextBio:20823957 Uniprot:Q06A37
        Length = 3011

 Score = 402 (146.6 bits), Expect = 1.4e-35, P = 1.4e-35
 Identities = 95/216 (43%), Positives = 128/216 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTD---- 50
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE          +  D    
Sbjct:  1222 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 1281

Query:    51 --EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1282 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1341

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:  1342 RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1401

Query:   169 AKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:  1402 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 1437

 Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 51/134 (38%), Positives = 78/134 (58%)

Query:   152 YDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE- 210
             +++D +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+ 
Sbjct:  1274 HNAD-SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY 1326

Query:   211 --EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
               + RY Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++D
Sbjct:  1327 LIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFD 1386

Query:   269 SDWNPQMDLQAMVR 282
             SDWNPQ DLQA  R
Sbjct:  1387 SDWNPQNDLQAQAR 1400


>UNIPROTKB|E1C2F7 [details] [associations]
            symbol:E1C2F7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
            transcription coactivator activity" evidence=IEA] [GO:0008285
            "negative regulation of cell proliferation" evidence=IEA]
            [GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
            regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
            muscle cell differentiation" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
            "nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
            GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
            GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
            GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
            OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
            EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
            EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
            Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
        Length = 1546

 Score = 398 (145.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 98/252 (38%), Positives = 138/252 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN---- 56
             +L+ D    +  GK     L N +MQLRK  NHPY+F   E     +    + V N    
Sbjct:   960 ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL 1019

Query:    57 ---SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
                SGK  +LD++LPKL+A   RVL+F QMT ++ I+EDY  +R F Y RLDG T  EDR
Sbjct:  1020 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1079

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR------ 167
                +  FN  GS  FIF+LSTRAGGLG+NL  AD V+++DSDWNP  DLQA  R      
Sbjct:  1080 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQ 1139

Query:   168 --EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQ 222
               E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   L+ +
Sbjct:  1140 QNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHE 1198

Query:   223 TAHEDRQRQIND 234
               +E+     +D
Sbjct:  1199 EENEEEDEVPDD 1210

 Score = 225 (84.3 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 52/123 (42%), Positives = 68/123 (55%)

Query:   165 MVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEED-----RYLYCRL 219
             ++  A++ R     + L+  + + RA  H  R+          T  ED      +LY RL
Sbjct:  1013 VINGAELYRASGKFELLDRILPKLRATNH--RVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1070

Query:   220 DGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 279
             DG T  EDR   +  FN  GS  FIF+LSTRAGGLG+NL  AD V+++DSDWNP  DLQA
Sbjct:  1071 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQA 1130

Query:   280 MVR 282
               R
Sbjct:  1131 QDR 1133


>ZFIN|ZDB-GENE-070912-179 [details] [associations]
            symbol:chd7 "chromodomain helicase DNA binding
            protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
            "retina development in camera-type eye" evidence=IMP] [GO:0021602
            "cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
            looping" evidence=IMP] [GO:0030282 "bone mineralization"
            evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
            GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
            GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
            Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
            Uniprot:F1QGL1
        Length = 3140

 Score = 400 (145.9 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 95/205 (46%), Positives = 122/205 (59%)

Query:    12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTDE---HL---VFNSGK 59
             G G      L N +M+LRKC NHPYL +GAE          +  D+   HL   +  +GK
Sbjct:  1284 GGGGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRETHPLDQPEFHLQAMIQAAGK 1343

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
             +V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+     RQ  I+ 
Sbjct:  1344 LVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDR 1403

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK- 178
             F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R  +I +  S+K 
Sbjct:  1404 FSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKI 1463

Query:   179 KALEAKMSRYRAPFHQLRIAYGANK 203
               L  + S  R  F +  +  G +K
Sbjct:  1464 YRLITRNSYEREMFDKASLKLGLDK 1488

 Score = 209 (78.6 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 50/128 (39%), Positives = 74/128 (57%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P+  LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+   + RY
Sbjct:  1330 PEFHLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY 1383

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:  1384 PYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1443

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:  1444 NDLQAQAR 1451


>TAIR|locus:2173644 [details] [associations]
            symbol:CHR1 "chromatin remodeling 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
            "regulation of gene expression by genetic imprinting" evidence=IMP]
            [GO:0044030 "regulation of DNA methylation" evidence=IMP]
            [GO:0051574 "positive regulation of histone H3-K9 methylation"
            evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
            histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
            evidence=IMP] [GO:0009294 "DNA mediated transformation"
            evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
            evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
            [GO:0006346 "methylation-dependent chromatin silencing"
            evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
            [GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
            phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
            small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
            evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
            EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
            GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
            EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
            RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
            SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
            EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
            TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
            PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
            GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
        Length = 764

 Score = 390 (142.3 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 103/249 (41%), Positives = 147/249 (59%)

Query:     8 DVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPP-YTTDEHLVFNSGKMVVLDKL 66
             + + G G   K +L N+++QLRK  NHP L  G   G   Y   E +V   GK  +L++L
Sbjct:   475 NAIRGQGW--KGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERL 532

Query:    67 LPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSD 126
             L +L A   +VLIFSQ T++LDI++ Y   +GF+ CR+DG    ++R+RQI DF+ E S 
Sbjct:   533 LVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSS 592

Query:   127 IFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI-------LRRGSIKK 179
               IF+LSTRAGGLGINL  AD  +LYDSDWNPQMDLQAM R  +I       + R S  +
Sbjct:   593 CSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQ 652

Query:   180 ALEAKMSR--Y-RAPFHQLRIAYGA---NKGKNYT--EEEDRYLYCRLDGQTAHEDR--Q 229
             ++E ++ +  Y +     + I  G     + K+ T  EEED     + D +TA ED+  Q
Sbjct:   653 SIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKED-ETA-EDKLIQ 710

Query:   230 RQINDFNME 238
               I+D +++
Sbjct:   711 TDISDADLD 719

 Score = 235 (87.8 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 46/77 (59%), Positives = 55/77 (71%)

Query:   206 NYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVV 265
             +Y   E  +  CR+DG    ++R+RQI DF+ E S   IF+LSTRAGGLGINL  AD  +
Sbjct:   557 DYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCI 616

Query:   266 LYDSDWNPQMDLQAMVR 282
             LYDSDWNPQMDLQAM R
Sbjct:   617 LYDSDWNPQMDLQAMDR 633


>UNIPROTKB|E1BS48 [details] [associations]
            symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
            EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
            EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
            IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
        Length = 2614

 Score = 398 (145.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 96/217 (44%), Positives = 130/217 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GP------PYTTDE 51
             +L K+   ++ GAG+     L N +M+LRKC NHPYL  GAE    G       P   D 
Sbjct:  1110 ILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPTAPDF 1169

Query:    52 HL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             HL   + ++GK+V++DKLLPK+KA   +VLIFSQM R LDILEDY   + + Y R+DG+ 
Sbjct:  1170 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRV 1229

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ-AMVR 167
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ A  R
Sbjct:  1230 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQAR 1289

Query:   168 EAKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
               +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1290 CHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDK 1326

 Score = 205 (77.2 bits), Expect = 9.8e-14, P = 9.8e-14
 Identities = 49/124 (39%), Positives = 71/124 (57%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+     RY
Sbjct:  1167 PDFHLQAMIQSA-----GKLV-LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRY 1220

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
             LY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:  1221 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1280

Query:   275 MDLQ 278
              DLQ
Sbjct:  1281 NDLQ 1284


>TAIR|locus:2054955 [details] [associations]
            symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
            ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
            EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
            OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
        Length = 877

 Score = 390 (142.3 bits), Expect = 3.6e-35, P = 3.6e-35
 Identities = 84/175 (48%), Positives = 112/175 (64%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIF 80
             LQNI++QLRK  +HPYLF G EP  P+   EHLV  SGK++VLD+LL +L     RVL+F
Sbjct:   341 LQNIVIQLRKACSHPYLFPGIEP-EPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLF 399

Query:    81 SQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN----------MEGSDIFIF 130
             SQMT  LDIL+D+   R + Y RLDG    E+R   I +F+          ++GS+ F+F
Sbjct:   400 SQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVF 459

Query:   131 MLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIKKALEAKM 185
             M+STRAGG+G+NL  AD V+ Y+ DWNPQ+D QA+ R  +I   G I   L   +
Sbjct:   460 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI---GQISHVLSINL 511

 Score = 187 (70.9 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
 Identities = 38/80 (47%), Positives = 52/80 (65%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFN----------MEGSDIFIFMLSTRAGGLGINLATAD 262
             RY Y RLDG    E+R   I +F+          ++GS+ F+FM+STRAGG+G+NL  AD
Sbjct:   417 RYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAAD 476

Query:   263 VVVLYDSDWNPQMDLQAMVR 282
              V+ Y+ DWNPQ+D QA+ R
Sbjct:   477 TVIFYEQDWNPQVDKQALQR 496

 Score = 44 (20.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query:    81 SQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             S++ R    LE   Y  G KYCRLD + +  D  ++
Sbjct:   118 SEINRFTPNLEVLRYV-GDKYCRLDMRKSMYDHVKK 152


>FB|FBgn0023395 [details] [associations]
            symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
            [GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            [GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
            InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
            RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
            DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
            EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
            UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
            OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
            NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
        Length = 892

 Score = 389 (142.0 bits), Expect = 4.8e-35, P = 4.8e-35
 Identities = 87/186 (46%), Positives = 114/186 (61%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGA------EPGPPYTTDEHLVF 55
             +L K+   +N  G      L NI+M LRKC NHPYLF  A       P   Y     L  
Sbjct:   525 ILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSS-LTK 583

Query:    56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
              SGK+ +L K+L +LKA   RVL+FSQMT+ML++LE +    G++Y R+DG    + RQ+
Sbjct:   584 ASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQK 643

Query:   116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRG 175
              I+ FN   S+ F+F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R     R G
Sbjct:   644 AIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAH---RMG 700

Query:   176 SIKKAL 181
               KK +
Sbjct:   701 QKKKVM 706

 Score = 222 (83.2 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 53/119 (44%), Positives = 72/119 (60%)

Query:   168 EAKILRRGSIKKALEAKM-SRYRAPFHQLRIAYGANKGKNYTE---EEDRYLYCRLDGQT 223
             E   L + S K  L +KM  + +A  H++ +     K  N  E   E + Y Y R+DG  
Sbjct:   577 EMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSI 636

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
               + RQ+ I+ FN   S+ F+F+LSTRAGGLGINLATAD V+++DSDWNP  D+QA  R
Sbjct:   637 KGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSR 695


>UNIPROTKB|F6XTU7 [details] [associations]
            symbol:SMARCA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
            [GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
            Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
            SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
            GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
            SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
            Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
        Length = 1075

 Score = 207 (77.9 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
 Identities = 41/66 (62%), Positives = 51/66 (77%)

Query:   113 RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKIL 172
             ++  I  FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R  +I 
Sbjct:   558 KKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG 617

Query:   173 RRGSIK 178
             ++  ++
Sbjct:   618 QKKPVR 623

 Score = 207 (77.9 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
 Identities = 44/82 (53%), Positives = 58/82 (70%)

Query:   168 EAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL-----DGQ 222
             EA+I RR SIKKAL+AK++RY+APFHQLRI YG +KGKNYTEEEDR+L C L     D +
Sbjct:   928 EARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRE 987

Query:   223 TAHEDRQRQINDFNMEGSDIFI 244
               +E+ ++ + +      D FI
Sbjct:   988 NVYEELRQCVRNAPQFRFDWFI 1009

 Score = 203 (76.5 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
 Identities = 40/55 (72%), Positives = 45/55 (81%)

Query:   228 RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             ++  I  FN   S  FIFMLSTRAGGLGINLA+ADVV+LYDSDWNPQ+DLQAM R
Sbjct:   558 KKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR 612

 Score = 54 (24.1 bits), Expect = 4.9e-35, Sum P(3) = 4.9e-35
 Identities = 17/71 (23%), Positives = 31/71 (43%)

Query:    11 NGAGKLEKMRLQNILMQLR--KCSNHPYLFDGAEPGPPYTTDEHLVFNS-GKMVVLDKLL 67
             N + K  K+ + N++M LR  KC    +     +    Y    H+ + S G + +LD   
Sbjct:   439 NNSNKNHKLDILNVIMLLREAKCCGASFCLQKKKQNVAYINKVHINYCSKGIISMLDYCK 498

Query:    68 PKLKAQESRVL 78
              +++    R L
Sbjct:   499 TEIEQHRCRCL 509

 Score = 39 (18.8 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    39 DGAEPGPPYTTDE 51
             DGAEP  P  T+E
Sbjct:   841 DGAEPLTPEETEE 853


>ZFIN|ZDB-GENE-030605-1 [details] [associations]
            symbol:smarca4 "SWI/SNF related, matrix associated,
            actin dependent regulator of chromatin, subfamily a, member 4"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
            retina development" evidence=IMP] [GO:0007417 "central nervous
            system development" evidence=IMP] [GO:0014032 "neural crest cell
            development" evidence=IMP] [GO:0060059 "embryonic retina
            morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
            layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
            evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
            [GO:0060973 "cell migration involved in heart development"
            evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
            "cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
            "embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
            "activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
            InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
            SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
            GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
            InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
            KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
            HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
            EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
            RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
            Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
            KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
            GO:GO:0021634 Uniprot:Q7ZSY3
        Length = 1627

 Score = 393 (143.4 bits), Expect = 5.5e-35, P = 5.5e-35
 Identities = 99/256 (38%), Positives = 139/256 (54%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1028 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1083

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +R FKY RLDG T 
Sbjct:  1084 GSDLYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTK 1143

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   + +FN      FIF+LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1144 AEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1203

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1204 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1262

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1263 LEHEEQDEEEDEVPDD 1278

 Score = 206 (77.6 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 39/69 (56%), Positives = 48/69 (69%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   + +FN      FIF+LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1133 FKYLRLDGTTKAEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 1192

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1193 HQDLQAQDR 1201


>POMBASE|SPCC1620.14c [details] [associations]
            symbol:snf22 "ATP-dependent DNA helicase Snf22"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
            [GO:0000991 "core RNA polymerase II binding transcription factor
            activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
            [GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
            "chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
            meiotic recombination" evidence=IMP] [GO:0010972 "negative
            regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
            [GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
            by regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:1900400 "regulation of iron ion import by
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
            PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
            SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
            GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
            GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
            GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
            InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
            HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
            PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
            DIP:DIP-48377N STRING:O94421 PRIDE:O94421
            EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
            NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
        Length = 1680

 Score = 393 (143.4 bits), Expect = 5.7e-35, P = 5.7e-35
 Identities = 97/240 (40%), Positives = 137/240 (57%)

Query:    10 VNGA-GKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFNS-GKMVVLDKL 66
             V+G  GK     LQN +MQL+K  NHP++F+  E    P  T+  L++ + GK  +LD++
Sbjct:  1136 VDGEKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFELLDRI 1195

Query:    67 LPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSD 126
             LPKL     + L+F QMT+++ I+EDY   + +KY RLDG T  +DR   +  FN   SD
Sbjct:  1196 LPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSD 1255

Query:   127 IFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR--------EAKILRRGSIK 178
             ++IFMLSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R        E +ILR  + K
Sbjct:  1256 VYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEK 1315

Query:   179 KALEAKMSR--YRAPFHQLRIAYGANKGKNYTEEEDRYLYCRL--DGQTAHEDRQRQIND 234
                E  +SR  Y+       I  G    K+  EE + +L   L  DG   H+    ++ D
Sbjct:  1316 SIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQD 1375

 Score = 215 (80.7 bits), Expect = 5.1e-16, P = 5.1e-16
 Identities = 41/78 (52%), Positives = 55/78 (70%)

Query:   205 KNYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVV 264
             ++Y   ++ + Y RLDG T  +DR   +  FN   SD++IFMLSTRAGGLG+NL TAD V
Sbjct:  1220 EDYLRSKN-WKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTV 1278

Query:   265 VLYDSDWNPQMDLQAMVR 282
             +++D+DWNP  DLQA  R
Sbjct:  1279 IIFDTDWNPHQDLQAQDR 1296


>ASPGD|ASPL0000047400 [details] [associations]
            symbol:AN2285 species:162425 "Emericella nidulans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
            mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
            silencing at telomere" evidence=IEA] [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043618 "regulation of transcription from RNA
            polymerase II promoter in response to stress" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
            GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
            STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
            KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
            OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
        Length = 1612

 Score = 348 (127.6 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
 Identities = 67/118 (56%), Positives = 87/118 (73%)

Query:    54 VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
             V +SGK+  LD+LL +LKA   RVL++ QMTRM+D++E+Y  +R +KYCRLDG T  EDR
Sbjct:  1317 VTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDR 1376

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             +  + DF     DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  ++
Sbjct:  1377 RDTVADFQQR-PDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRL 1433

 Score = 232 (86.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 51/111 (45%), Positives = 67/111 (60%)

Query:   175 GSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQTAHEDRQRQ 231
             G + K L+  +   +A  H++ + +   +  +  EE      Y YCRLDG T  EDR+  
Sbjct:  1321 GKLAK-LDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDT 1379

Query:   232 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             + DF     DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1380 VADFQQR-PDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDR 1429

 Score = 75 (31.5 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPYT 48
             L N++MQ RK  NHP LF+ AE   P++
Sbjct:  1083 LMNLVMQFRKVCNHPDLFERAETKSPFS 1110


>CGD|CAL0003962 [details] [associations]
            symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
            "RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
            centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
            evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
            [GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
            "cytoskeleton organization" evidence=IEA] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
            "G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
            "DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
            PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
            ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
            GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
            Uniprot:Q5AEM9
        Length = 1303

 Score = 391 (142.7 bits), Expect = 6.3e-35, P = 6.3e-35
 Identities = 80/171 (46%), Positives = 109/171 (63%)

Query:    12 GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP---GPPYTTDEHLVFN-SGKMVVLDKLL 67
             G  K     L N +MQLRK  NHP++F+  E        T D  L++  SGK  +LD++L
Sbjct:   772 GGAKSGIKGLNNKIMQLRKICNHPFVFEEVESVLNSSRLTND--LIWRVSGKFELLDRVL 829

Query:    68 PKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDI 127
             PK K    RVL+F QMT+++DI+ED+  W+  KY RLDG T  E+RQ  +  FN   SD 
Sbjct:   830 PKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSDY 889

Query:   128 FIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             F F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R  +I ++  ++
Sbjct:   890 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVR 940

 Score = 214 (80.4 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 40/67 (59%), Positives = 48/67 (71%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             Y RLDG T  E+RQ  +  FN   SD F F+LSTRAGGLG+NL TAD V+++D+DWNP  
Sbjct:   863 YLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 922

Query:   276 DLQAMVR 282
             DLQA  R
Sbjct:   923 DLQAQDR 929


>UNIPROTKB|F1MLB2 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0045945 "positive regulation of transcription from RNA
            polymerase III promoter" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=IEA] [GO:0030178 "negative regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
            OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
            EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
            Uniprot:F1MLB2
        Length = 2537

 Score = 394 (143.8 bits), Expect = 7.9e-35, P = 7.9e-35
 Identities = 97/217 (44%), Positives = 129/217 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFD-GAEPG--PPYTT-------D 50
             +L K+   ++ GAG      L N +M+LRKC NHPYL + GAE      +         D
Sbjct:  1017 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHD 1076

Query:    51 EHL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQ 107
              HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+
Sbjct:  1077 FHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGR 1136

Query:   108 TAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
                  RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R
Sbjct:  1137 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1196

Query:   168 EAKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
               +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1197 CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 1233

 Score = 214 (80.4 bits), Expect = 1.0e-15, P = 1.0e-15
 Identities = 52/124 (41%), Positives = 73/124 (58%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
             LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + RYLY R
Sbjct:  1079 LQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1132

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             +DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ
Sbjct:  1133 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1192

Query:   279 AMVR 282
             A  R
Sbjct:  1193 AQAR 1196


>UNIPROTKB|F1S8J5 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
            "canonical Wnt receptor signaling pathway" evidence=IEA]
            [GO:0045945 "positive regulation of transcription from RNA
            polymerase III promoter" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
            residue binding" evidence=IEA] [GO:0030178 "negative regulation of
            Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
            "beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
            GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
            InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
            InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
            OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
            ArrayExpress:F1S8J5 Uniprot:F1S8J5
        Length = 2569

 Score = 394 (143.8 bits), Expect = 8.0e-35, P = 8.0e-35
 Identities = 97/217 (44%), Positives = 129/217 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFD-GAEPG--PPYTT-------D 50
             +L K+   ++ GAG      L N +M+LRKC NHPYL + GAE      +         D
Sbjct:  1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHD 1123

Query:    51 EHL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQ 107
              HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+
Sbjct:  1124 FHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGR 1183

Query:   108 TAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
                  RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R
Sbjct:  1184 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1243

Query:   168 EAKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
               +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1244 CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 1280

 Score = 214 (80.4 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 52/124 (41%), Positives = 73/124 (58%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
             LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + RYLY R
Sbjct:  1126 LQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1179

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             +DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ
Sbjct:  1180 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1239

Query:   279 AMVR 282
             A  R
Sbjct:  1240 AQAR 1243


>UNIPROTKB|E2QUS7 [details] [associations]
            symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
            Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
        Length = 2586

 Score = 394 (143.8 bits), Expect = 8.0e-35, P = 8.0e-35
 Identities = 97/217 (44%), Positives = 129/217 (59%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFD-GAEPG--PPYTT-------D 50
             +L K+   ++ GAG      L N +M+LRKC NHPYL + GAE      +         D
Sbjct:  1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHD 1123

Query:    51 EHL---VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQ 107
              HL   V ++GK+V++DKLLPKLKA   +VLIFSQM R LDILEDY   R + Y R+DG+
Sbjct:  1124 FHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGR 1183

Query:   108 TAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
                  RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R
Sbjct:  1184 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1243

Query:   168 EAKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
               +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:  1244 CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 1280

 Score = 214 (80.4 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 52/124 (41%), Positives = 73/124 (58%)

Query:   162 LQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCR 218
             LQAMVR A     G +   ++  + + +A  H++ I     +  +  E+   + RYLY R
Sbjct:  1126 LQAMVRSA-----GKLV-LIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1179

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             +DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ
Sbjct:  1180 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ 1239

Query:   279 AMVR 282
             A  R
Sbjct:  1240 AQAR 1243


>UNIPROTKB|I3LDG1 [details] [associations]
            symbol:LOC100738357 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00560000077077 EMBL:FP236283
            Ensembl:ENSSSCT00000031310 OMA:ENWRTEL Uniprot:I3LDG1
        Length = 323

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 84/179 (46%), Positives = 109/179 (60%)

Query:     2 VLMKDID-VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   +  GA +     L N +M+LRKC NHPYL +GAE            P  P  
Sbjct:   136 ILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDF 195

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   196 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 255

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQ  +R
Sbjct:   256 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQVTIR 314

 Score = 201 (75.8 bits), Expect = 8.3e-15, P = 8.3e-15
 Identities = 49/130 (37%), Positives = 72/130 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   193 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 246

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   247 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 306

Query:   275 MDLQAMVRTV 284
              DLQ  +R +
Sbjct:   307 NDLQVTIRMI 316


>CGD|CAL0005444 [details] [associations]
            symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
            "SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
            evidence=IMP] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
            activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
            transcription factor binding" evidence=IEA] [GO:0070577 "histone
            acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
            binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
            [GO:0044182 "filamentous growth of a population of unicellular
            organisms" evidence=IMP] [GO:1900430 "positive regulation of
            filamentous growth of a population of unicellular organisms"
            evidence=IMP] [GO:0036178 "filamentous growth of a population of
            unicellular organisms in response to neutral pH" evidence=IMP]
            [GO:1900442 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to neutral pH"
            evidence=IMP] [GO:0036180 "filamentous growth of a population of
            unicellular organisms in response to biotic stimulus" evidence=IMP]
            [GO:1900445 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to biotic stimulus"
            evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
            [GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
            "regulation of single-species biofilm formation on inanimate
            substrate" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
            evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=IEA] [GO:0031496 "positive regulation of mating type
            switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
            remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
            replication" evidence=IEA] [GO:0061412 "positive regulation of
            transcription from RNA polymerase II promoter in response to amino
            acid starvation" evidence=IEA] [GO:0036244 "cellular response to
            neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
            stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
            GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
            GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
            GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
            RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
            STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
        Length = 1690

 Score = 391 (142.7 bits), Expect = 9.5e-35, P = 9.5e-35
 Identities = 77/173 (44%), Positives = 112/173 (64%)

Query:     8 DVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP--GPPYTTDEHLVFNSGKMVVLDK 65
             D  NG+  +      N +MQL+K  NHP++++  E    P   T++ +   +GK  +LDK
Sbjct:  1050 DPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETNDQIWRVAGKFELLDK 1109

Query:    66 LLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGS 125
             +LPK KA   +VLIF QMT++++I+ED+  +RG KY RLDG T  +DR   +  FN   S
Sbjct:  1110 VLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDS 1169

Query:   126 DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             D F F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R  +I ++  ++
Sbjct:  1170 DYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVR 1222

 Score = 222 (83.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 46/105 (43%), Positives = 65/105 (61%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYL---YCRLDGQTAHEDRQRQINDFNM 237
             L+  + +++A  H++ I +   +  N  E+  R+    Y RLDG T  +DR   +  FN 
Sbjct:  1107 LDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNA 1166

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
               SD F F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R
Sbjct:  1167 PDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 1211

 Score = 38 (18.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query:   106 GQTAHED-RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATA 146
             GQT  +    +Q ++FN  G +   F     +  +G +L+T+
Sbjct:   101 GQTPQQPPTPQQFSNFNQNGYNGQQFSSQVHSPAIGGSLSTS 142


>UNIPROTKB|Q5AM49 [details] [associations]
            symbol:SNF2 "Putative uncharacterized protein SNF2"
            species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0009405
            "pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
            evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
            [GO:0036178 "filamentous growth of a population of unicellular
            organisms in response to neutral pH" evidence=IMP] [GO:0036180
            "filamentous growth of a population of unicellular organisms in
            response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
            response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
            growth of a population of unicellular organisms" evidence=IMP]
            [GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
            [GO:1900430 "positive regulation of filamentous growth of a
            population of unicellular organisms" evidence=IMP] [GO:1900442
            "positive regulation of filamentous growth of a population of
            unicellular organisms in response to neutral pH" evidence=IMP]
            [GO:1900445 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to biotic stimulus"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
            GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
            GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
            GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
            RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
            STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
        Length = 1690

 Score = 391 (142.7 bits), Expect = 9.5e-35, P = 9.5e-35
 Identities = 77/173 (44%), Positives = 112/173 (64%)

Query:     8 DVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEP--GPPYTTDEHLVFNSGKMVVLDK 65
             D  NG+  +      N +MQL+K  NHP++++  E    P   T++ +   +GK  +LDK
Sbjct:  1050 DPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETNDQIWRVAGKFELLDK 1109

Query:    66 LLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGS 125
             +LPK KA   +VLIF QMT++++I+ED+  +RG KY RLDG T  +DR   +  FN   S
Sbjct:  1110 VLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDS 1169

Query:   126 DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             D F F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R  +I ++  ++
Sbjct:  1170 DYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVR 1222

 Score = 222 (83.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 46/105 (43%), Positives = 65/105 (61%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYL---YCRLDGQTAHEDRQRQINDFNM 237
             L+  + +++A  H++ I +   +  N  E+  R+    Y RLDG T  +DR   +  FN 
Sbjct:  1107 LDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNA 1166

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
               SD F F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R
Sbjct:  1167 PDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 1211

 Score = 38 (18.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query:   106 GQTAHED-RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATA 146
             GQT  +    +Q ++FN  G +   F     +  +G +L+T+
Sbjct:   101 GQTPQQPPTPQQFSNFNQNGYNGQQFSSQVHSPAIGGSLSTS 142


>UNIPROTKB|D4AD08 [details] [associations]
            symbol:Chd2 "Chromodomain helicase DNA binding protein 2
            (Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
            PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
            GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
            IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
            Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
            RGD:1310056 NextBio:659434 Uniprot:D4AD08
        Length = 1834

 Score = 391 (142.7 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 80/152 (52%), Positives = 107/152 (70%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E     T  E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   760 NIVMELKKCCNHCYLIRAPEDSERETGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLI 819

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   820 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 879

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   880 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 911

 Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   839 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 898

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   899 QNDLQAQAR 907


>POMBASE|SPAC1250.01 [details] [associations]
            symbol:snf21 "ATP-dependent DNA helicase Snf21"
            species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
            chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
            transcription factor activity" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
            remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
            GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
            SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
            KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
            ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
            EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
            OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
        Length = 1199

 Score = 387 (141.3 bits), Expect = 1.5e-34, P = 1.5e-34
 Identities = 89/235 (37%), Positives = 138/235 (58%)

Query:    14 GKLEKMRLQNILMQLRKCSNHPYLFDGAEPG-PPYTTDEHLVFN-SGKMVVLDKLLPKLK 71
             GK     LQN +MQL+K  NHP++F+  E    P   +  +++  SGK  +LD++LPKL 
Sbjct:   690 GKTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLF 749

Query:    72 AQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFM 131
                 R+L+F QMT++++I+EDY ++R ++Y RLDG T  +DR + +  FN   +++ +F+
Sbjct:   750 RSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFL 809

Query:   132 LSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR--------EAKILRRGSIKKALEA 183
             LSTRAGGLG+NL TAD V+++DSDWNP  DLQA  R        E +I R  + K   E 
Sbjct:   810 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEEN 869

Query:   184 KMSR--YRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHE--DRQRQIND 234
              ++R  Y+       I  G    K+  EE + +L   L+ +   E  D + +++D
Sbjct:   870 ILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDD 924

 Score = 204 (76.9 bits), Expect = 5.4e-14, P = 5.4e-14
 Identities = 37/70 (52%), Positives = 51/70 (72%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ Y RLDG T  +DR + +  FN   +++ +F+LSTRAGGLG+NL TAD V+++DSDWN
Sbjct:   776 QWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWN 835

Query:   273 PQMDLQAMVR 282
             P  DLQA  R
Sbjct:   836 PHQDLQAQDR 845


>UNIPROTKB|F1NVT7 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
            EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
            Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
        Length = 1257

 Score = 387 (141.3 bits), Expect = 1.6e-34, P = 1.6e-34
 Identities = 93/216 (43%), Positives = 126/216 (58%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   ++ GA +     L N +M+LRKC NHPYL +GAE            P  P  
Sbjct:   636 ILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDF 695

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   696 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 755

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   756 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 815

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   816 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 851

 Score = 201 (75.8 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 50/128 (39%), Positives = 71/128 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   693 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 746

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   747 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 806

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:   807 NDLQAQAR 814


>DICTYBASE|DDB_G0293012 [details] [associations]
            symbol:DDB_G0293012 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
            SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
            RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
            EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
            InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
        Length = 3071

 Score = 392 (143.0 bits), Expect = 1.6e-34, P = 1.6e-34
 Identities = 84/167 (50%), Positives = 112/167 (67%)

Query:    20 RLQNILMQLRKCSNHPYLFDGAEPG----PPYTTDEHL----VFNSGKMVVLDKLLPKLK 71
             +L NI++Q+RK  NHP+L  GAE           DE L    V +S K+V++DKLL +LK
Sbjct:  1164 KLSNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQRLK 1223

Query:    72 AQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFM 131
             A+  +VLIFSQM   L+ILEDY  +R + Y RLDG    E RQ  I+ F  +G++ F+F+
Sbjct:  1224 AEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFVFL 1283

Query:   132 LSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             LSTRAGG+GINL TAD V+L+DSDWNPQ DLQA  R  +I +  ++K
Sbjct:  1284 LSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVK 1330

 Score = 234 (87.4 bits), Expect = 9.7e-18, P = 9.7e-18
 Identities = 55/117 (47%), Positives = 73/117 (62%)

Query:   170 KILRRGSIKKALEAKM-SRYRAPFHQLRIAYGANKGKNYTEE--EDR-YLYCRLDGQTAH 225
             ++L + S K  L  K+  R +A  HQ+ I     +  N  E+  + R Y Y RLDG    
Sbjct:  1203 ELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKS 1262

Query:   226 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             E RQ  I+ F  +G++ F+F+LSTRAGG+GINL TAD V+L+DSDWNPQ DLQA  R
Sbjct:  1263 EVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQAR 1319


>UNIPROTKB|F1MJ46 [details] [associations]
            symbol:SMARCA4 "Transcription activator BRG1" species:9913
            "Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
            "npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
            formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
            differentiation" evidence=IEA] [GO:0048730 "epidermis
            morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
            "positive regulation of DNA binding" evidence=IEA] [GO:0035887
            "aortic smooth muscle cell differentiation" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
            "forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
            differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
            organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
            evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
            sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0007403 "glial cell fate determination"
            evidence=IEA] [GO:0006346 "methylation-dependent chromatin
            silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
            [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001889 "liver development"
            evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
            [GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
            GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
            GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
            GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
            GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
            GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
            GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
            GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
            IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
            EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
            Uniprot:F1MJ46
        Length = 1604

 Score = 388 (141.6 bits), Expect = 1.8e-34, P = 1.8e-34
 Identities = 101/256 (39%), Positives = 141/256 (55%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN----- 56
             VL+ D    +  GK     L N +MQLRK  NHPY+F   E     +  EHL F      
Sbjct:  1008 VLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEE----SFSEHLGFTGGIVQ 1063

Query:    57 -------SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTA 109
                    SGK  +LD++LPKL+A   +VL+F QMT ++ I+EDY  +RGFKY RLDG T 
Sbjct:  1064 GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTK 1123

Query:   110 HEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR-- 167
              EDR   +  FN  GS+ FI +LSTRAGGLG+NL +AD V+++DSDWNP  DLQA  R  
Sbjct:  1124 AEDRGMLLT-FNEPGSEYFI-LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1181

Query:   168 ------EAKILRRGSIKKALEAKM---SRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
                   E ++LR  ++  ++E K+   ++Y+    Q  I  G    K+ + E   +L   
Sbjct:  1182 RIGQQNEVRVLRLCTVN-SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1240

Query:   219 LDGQTAHEDRQRQIND 234
             L+ +   E+     +D
Sbjct:  1241 LEHEEQDEEEDEVPDD 1256

 Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 40/69 (57%), Positives = 49/69 (71%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             + Y RLDG T  EDR   +  FN  GS+ FI +LSTRAGGLG+NL +AD V+++DSDWNP
Sbjct:  1113 FKYLRLDGTTKAEDRGMLLT-FNEPGSEYFI-LLSTRAGGLGLNLQSADTVIIFDSDWNP 1170

Query:   274 QMDLQAMVR 282
               DLQA  R
Sbjct:  1171 HQDLQAQDR 1179


>UNIPROTKB|I3LRQ2 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
            Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
        Length = 1051

 Score = 385 (140.6 bits), Expect = 1.9e-34, P = 1.9e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   755 NIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLI 814

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   815 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 874

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   875 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 906

 Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   834 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 893

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   894 QNDLQAQAR 902


>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
            symbol:chd8 "chromodomain helicase DNA binding
            protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
            signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
            ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
            GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
            InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
            UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
            Uniprot:B0R0I6
        Length = 2511

 Score = 390 (142.3 bits), Expect = 2.1e-34, P = 2.1e-34
 Identities = 87/170 (51%), Positives = 109/170 (64%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDEHL---VFNSGKMVVLDKLLP 68
             L N +M+LRKC NHPYL  GAE            P   D HL   V ++GK+V+LDKLLP
Sbjct:  1121 LLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLP 1180

Query:    69 KLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIF 128
             +LKA   +VLIFSQM R LDILEDY   + + Y R+DG+     RQ  I+ F+   SD F
Sbjct:  1181 RLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRF 1240

Query:   129 IFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             +F+L TRAGGLGINL  AD  V++DSDWNPQ DLQA  R  +I +  ++K
Sbjct:  1241 VFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVK 1290

 Score = 222 (83.2 bits), Expect = 1.5e-16, P = 1.5e-16
 Identities = 55/128 (42%), Positives = 73/128 (57%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQA+VR A     G +   L+  + R +A  H++ I     +  +  E+     RY
Sbjct:  1158 PDFHLQALVRSA-----GKLV-LLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRY 1211

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
             LY R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  V++DSDWNPQ
Sbjct:  1212 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQ 1271

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:  1272 NDLQAQAR 1279


>UNIPROTKB|J9NSS6 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
            Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
        Length = 1379

 Score = 385 (140.6 bits), Expect = 3.0e-34, P = 3.0e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   753 NIVMELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLI 812

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   813 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 872

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   873 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 904

 Score = 219 (82.2 bits), Expect = 1.5e-16, P = 1.5e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   832 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 891

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   892 QNDLQAQAR 900


>UNIPROTKB|F1NLW6 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
            EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
            ArrayExpress:F1NLW6 Uniprot:F1NLW6
        Length = 2005

 Score = 387 (141.3 bits), Expect = 3.2e-34, P = 3.2e-34
 Identities = 93/216 (43%), Positives = 126/216 (58%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   ++ GA +     L N +M+LRKC NHPYL +GAE            P  P  
Sbjct:   511 ILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDF 570

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   571 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 630

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   631 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 690

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   691 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 726

 Score = 201 (75.8 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 50/128 (39%), Positives = 71/128 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   568 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 621

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   622 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 681

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:   682 NDLQAQAR 689


>UNIPROTKB|F1NLV5 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
            EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
            Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
        Length = 2007

 Score = 387 (141.3 bits), Expect = 3.2e-34, P = 3.2e-34
 Identities = 93/216 (43%), Positives = 126/216 (58%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   ++ GA +     L N +M+LRKC NHPYL +GAE            P  P  
Sbjct:   511 ILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDF 570

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   571 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 630

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   631 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 690

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   691 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 726

 Score = 201 (75.8 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 50/128 (39%), Positives = 71/128 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   568 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 621

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   622 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 681

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:   682 NDLQAQAR 689


>UNIPROTKB|F1PTH3 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
            EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
            Uniprot:F1PTH3
        Length = 2715

 Score = 388 (141.6 bits), Expect = 3.7e-34, P = 3.7e-34
 Identities = 93/216 (43%), Positives = 125/216 (57%)

Query:     2 VLMKDID-VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   +  GA +     L N +M+LRKC NHPYL +GAE            P  P  
Sbjct:   714 ILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDF 773

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   774 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 833

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   834 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 893

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   894 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 929

 Score = 201 (75.8 bits), Expect = 4.1e-13, P = 4.1e-13
 Identities = 50/128 (39%), Positives = 71/128 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   771 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 824

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   825 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 884

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:   885 NDLQAQAR 892


>UNIPROTKB|J9P0F6 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
            EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
            Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
            Uniprot:J9P0F6
        Length = 2715

 Score = 388 (141.6 bits), Expect = 3.7e-34, P = 3.7e-34
 Identities = 93/216 (43%), Positives = 125/216 (57%)

Query:     2 VLMKDID-VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   +  GA +     L N +M+LRKC NHPYL +GAE            P  P  
Sbjct:   714 ILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDF 773

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   774 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 833

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   834 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 893

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   894 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 929

 Score = 201 (75.8 bits), Expect = 4.1e-13, P = 4.1e-13
 Identities = 50/128 (39%), Positives = 71/128 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   771 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 824

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   825 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 884

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:   885 NDLQAQAR 892


>UNIPROTKB|Q8TD26 [details] [associations]
            symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
            "chromatin binding" evidence=NAS] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
            EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
            EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
            EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
            RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
            PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
            MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
            PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
            Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
            KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
            GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
            HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
            HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
            OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
            EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
            ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
            Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
        Length = 2715

 Score = 388 (141.6 bits), Expect = 3.7e-34, P = 3.7e-34
 Identities = 93/216 (43%), Positives = 125/216 (57%)

Query:     2 VLMKDID-VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   +  GA +     L N +M+LRKC NHPYL +GAE            P  P  
Sbjct:   714 ILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDF 773

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   774 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 833

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   834 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 893

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   894 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 929

 Score = 201 (75.8 bits), Expect = 4.1e-13, P = 4.1e-13
 Identities = 50/128 (39%), Positives = 71/128 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   771 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 824

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   825 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 884

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:   885 NDLQAQAR 892


>FB|FBgn0250786 [details] [associations]
            symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
            species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
            chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
            evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
            exchange of chromosomal proteins" evidence=IMP] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
            morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
            GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
            InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
            InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
            RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
            STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
            GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
            FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
            KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
            GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
            GO:GO:0035042 Uniprot:Q7KU24
        Length = 1883

 Score = 386 (140.9 bits), Expect = 3.8e-34, P = 3.8e-34
 Identities = 86/180 (47%), Positives = 113/180 (62%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAE-PGPPYTTDEHL---VFNS 57
             +L K+ D +    +       NI+++L+KC NH  L   +E        DE L   +  S
Sbjct:   776 ILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGS 835

Query:    58 GKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQI 117
             GK+V+LDKLL +LK    RVLIFSQM RMLD+L DY   R F + RLDG    E R++ +
Sbjct:   836 GKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQAL 895

Query:   118 NDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
             + FN EGS  F F+LSTRAGGLGINLATAD V+++DSDWNPQ DLQA  R  +I ++  +
Sbjct:   896 DHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQV 955

 Score = 220 (82.5 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 42/73 (57%), Positives = 54/73 (73%)

Query:   210 EEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDS 269
             ++  + + RLDG    E R++ ++ FN EGS  F F+LSTRAGGLGINLATAD V+++DS
Sbjct:   873 QKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDS 932

Query:   270 DWNPQMDLQAMVR 282
             DWNPQ DLQA  R
Sbjct:   933 DWNPQNDLQAQAR 945


>UNIPROTKB|J9NX79 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
            Uniprot:J9NX79
        Length = 1689

 Score = 385 (140.6 bits), Expect = 4.1e-34, P = 4.1e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   722 NIVMELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLI 781

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   782 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 841

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   842 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 873

 Score = 219 (82.2 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   801 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 860

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   861 QNDLQAQAR 869


>UNIPROTKB|I3LQZ8 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
            Uniprot:I3LQZ8
        Length = 1709

 Score = 385 (140.6 bits), Expect = 4.2e-34, P = 4.2e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   742 NIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLI 801

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   802 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 861

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   862 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 893

 Score = 219 (82.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   821 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 880

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   881 QNDLQAQAR 889

 Score = 41 (19.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 10/52 (19%), Positives = 21/52 (40%)

Query:   163 QAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRY 214
             Q ++ EAK       ++  + K   +R  + +    YG  +     +E  R+
Sbjct:    75 QPVLPEAKEKPASKKERIADVKKKTHRCMWEEYPDVYGVRRSNRSRQEPSRF 126


>UNIPROTKB|O14647 [details] [associations]
            symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
            InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
            EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
            EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
            RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
            ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
            PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
            Ensembl:ENST00000394196 Ensembl:ENST00000420239
            Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
            UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
            MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
            OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
            NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
            Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
        Length = 1828

 Score = 385 (140.6 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   753 NIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLI 812

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   813 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 872

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   873 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 904

 Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   832 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 891

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   892 QNDLQAQAR 900


>UNIPROTKB|E2R5Z7 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
            NextBio:20854276 Uniprot:E2R5Z7
        Length = 1831

 Score = 385 (140.6 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   756 NIVMELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLI 815

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   816 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 875

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   876 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 907

 Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   835 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 894

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   895 QNDLQAQAR 903


>UNIPROTKB|F1SA77 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
            Uniprot:F1SA77
        Length = 1831

 Score = 385 (140.6 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   755 NIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLI 814

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   815 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 874

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   875 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 906

 Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   834 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 893

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   894 QNDLQAQAR 902


>UNIPROTKB|J9PA90 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
            Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
        Length = 1840

 Score = 385 (140.6 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 79/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   766 NIVMELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLI 825

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   826 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 885

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   886 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 917

 Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   845 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 904

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   905 QNDLQAQAR 913


>UNIPROTKB|F1N734 [details] [associations]
            symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
            EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
            EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
            ArrayExpress:F1N734 Uniprot:F1N734
        Length = 2720

 Score = 387 (141.3 bits), Expect = 4.8e-34, P = 4.8e-34
 Identities = 93/216 (43%), Positives = 125/216 (57%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAE------------PGPPYT 48
             +L K+   ++ GA +     L N +M+LRKC NHPYL  GAE            P  P  
Sbjct:   713 ILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSPDAPDF 772

Query:    49 TDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKL A   +VLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:   773 QLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRV 832

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
                 RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ DLQA  R 
Sbjct:   833 RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 892

Query:   169 AKILRRGSIKK-ALEAKMSRYRAPFHQLRIAYGANK 203
              +I +  ++K   L  + S  R  F +  +  G +K
Sbjct:   893 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDK 928

 Score = 201 (75.8 bits), Expect = 4.1e-13, P = 4.1e-13
 Identities = 50/128 (39%), Positives = 71/128 (55%)

Query:   158 PQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRY 214
             P   LQAM++ A     G +   ++  + +  A  H++ I     +  +  E+   + RY
Sbjct:   770 PDFQLQAMIQAA-----GKLV-LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRY 823

Query:   215 LYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQ 274
              Y R+DG+     RQ  I+ F    SD F+F+L TRAGGLGINL  AD  +++DSDWNPQ
Sbjct:   824 TYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 883

Query:   275 MDLQAMVR 282
              DLQA  R
Sbjct:   884 NDLQAQAR 891


>UNIPROTKB|E1C1A9 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
            EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
            Uniprot:E1C1A9
        Length = 1727

 Score = 384 (140.2 bits), Expect = 5.4e-34, P = 5.4e-34
 Identities = 79/152 (51%), Positives = 107/152 (70%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYT---TDEHLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH YL    E         T + L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   755 NIVMELKKCCNHCYLIKPPEENERENGIETLQSLIRSSGKLILLDKLLTRLRDRGNRVLI 814

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   815 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 874

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   875 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 906

 Score = 219 (82.2 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   834 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 893

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   894 QNDLQAQAR 902


>UNIPROTKB|F1RT88 [details] [associations]
            symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
            "regulation of growth hormone secretion" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0050890 "cognition"
            evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
            [GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
            [GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IEA]
            [GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
            [GO:0030540 "female genitalia development" evidence=IEA]
            [GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
            "cranial nerve development" evidence=IEA] [GO:0008015 "blood
            circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
            evidence=IEA] [GO:0007605 "sensory perception of sound"
            evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
            [GO:0007417 "central nervous system development" evidence=IEA]
            [GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
            utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
            system development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
            InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
            Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
            SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
            GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
            GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
            GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
            GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
            InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
            GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
            Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
        Length = 2991

 Score = 385 (140.6 bits), Expect = 8.7e-34, P = 8.7e-34
 Identities = 93/218 (42%), Positives = 127/218 (58%)

Query:     2 VLMKDIDVVN-GAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPG------PPYTTD---- 50
             +L K+   ++ G G+     L N +M+LRKC NHPYL +GAE          +  D    
Sbjct:  1214 ILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 1273

Query:    51 --EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
               + ++  +GK+V++DKLLPKLKA   RVLIFSQM R LDILEDY   R + Y R+DG+ 
Sbjct:  1274 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1333

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM--DLQAMV 166
                 RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++DSDWNP+M    QA  
Sbjct:  1334 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQA 1393

Query:   167 REAKILRRGSIK-KALEAKMSRYRAPFHQLRIAYGANK 203
             R  +I +  S+K   L  + S  R  F +  +  G +K
Sbjct:  1394 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDK 1431

 Score = 192 (72.6 bits), Expect = 7.4e-12, P = 7.4e-12
 Identities = 49/136 (36%), Positives = 77/136 (56%)

Query:   152 YDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE- 210
             +++D +P   LQAM++ A     G +   ++  + + +A  H++ I     +  +  E+ 
Sbjct:  1266 HNAD-SPDFQLQAMIQAA-----GKLV-LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDY 1318

Query:   211 --EDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYD 268
               + RY Y R+DG+     RQ  I+ F+   SD F+F+L TRAGGLGINL  AD  +++D
Sbjct:  1319 LIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFD 1378

Query:   269 SDWNPQM--DLQAMVR 282
             SDWNP+M    QA  R
Sbjct:  1379 SDWNPKMISSFQAQAR 1394


>UNIPROTKB|G3MXX3 [details] [associations]
            symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
            SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
            Uniprot:G3MXX3
        Length = 1810

 Score = 380 (138.8 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 78/152 (51%), Positives = 106/152 (69%)

Query:    23 NILMQLRKCSNHPYLFDGAEPGPPYTTDE---HLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             NI+M+L+KC NH +L    E        E    L+ +SGK+++LDKLL +L+ + +RVLI
Sbjct:   735 NIVMELKKCCNHCHLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLI 794

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM RMLDIL +Y   + + + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGL
Sbjct:   795 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 854

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLA+AD VV++DSDWNPQ DLQA  R  +I
Sbjct:   855 GINLASADTVVIFDSDWNPQNDLQAQARAHRI 886

 Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + RLDG    E R++ ++ FN +GS+ F F+LSTRAGGLGINLA+AD VV++DSDWNP
Sbjct:   814 YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 873

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   874 QNDLQAQAR 882


>UNIPROTKB|F1Q2U2 [details] [associations]
            symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
            PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
            GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
            Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
        Length = 898

 Score = 373 (136.4 bits), Expect = 2.6e-33, P = 2.6e-33
 Identities = 84/179 (46%), Positives = 116/179 (64%)

Query:     2 VLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSG--K 59
             +LMKD+D        +K++LQN+L QLRKC +HPYLF+G E  P + T   L+F +   K
Sbjct:   295 ILMKDLDAFESE-MAKKVKLQNVLSQLRKCVDHPYLFEG-ETVPFFLT---LLFMTTPLK 349

Query:    60 MVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQIND 119
              + L  L     A+  RVL+FSQMT+MLDIL+DY  +RG+ Y R+DG    E+R   I +
Sbjct:   350 NLELAALSFLFLARGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKN 409

Query:   120 FNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             F  +   +F+F+LSTRAGG+G+NL  AD V+  DSD+NPQ DLQA  R  +I +  S+K
Sbjct:   410 FGQQ--PVFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 466

 Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 35/69 (50%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y R+DG    E+R   I +F  +   +F+F+LSTRAGG+G+NL  AD V+  DSD+NP
Sbjct:   389 YSYERVDGSVRGEERHLAIKNFGQQ--PVFVFLLSTRAGGVGMNLTAADTVIFVDSDFNP 446

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:   447 QNDLQAAAR 455


>MGI|MGI:1915392 [details] [associations]
            symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
            "Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
            evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
            "DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006302 "double-strand break repair"
            evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
            "response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
            cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
            [GO:0010571 "positive regulation of DNA replication involved in S
            phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
            unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
            evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
            assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
            [GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
            "cellular response to ionizing radiation" evidence=ISO] [GO:2000045
            "regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
            GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
            GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
            GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
            CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
            HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
            EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
            RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
            SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
            PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
            Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
            InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
            GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
        Length = 1559

 Score = 337 (123.7 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1097 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1156

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1157 SERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1215

Query:   171 I 171
             +
Sbjct:  1216 L 1216

 Score = 216 (81.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +  AL+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1096 KESLITDSGKLY-ALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1154

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1155 KISERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1212

 Score = 70 (29.7 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   807 LMNLVMQFRKVCNHPELFERQETWSPF 833


>UNIPROTKB|E1BAN8 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
            cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
            radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
            RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
            GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
        Length = 1566

 Score = 337 (123.7 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1104 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1163

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1164 SERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1222

Query:   171 I 171
             +
Sbjct:  1223 L 1223

 Score = 216 (81.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +  AL+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1103 KESLITDSGKLY-ALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1161

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1162 KISERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1219

 Score = 70 (29.7 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   814 LMNLVMQFRKVCNHPELFERQETWSPF 840


>SGD|S000005816 [details] [associations]
            symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
            remodeling complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
            [GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
            "chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
            regulation of mating type switching" evidence=IMP] [GO:0031492
            "nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
            mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
            repair" evidence=IMP] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
            evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
            [GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
            [GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
            "histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
            "strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
            transcription from RNA polymerase II promoter in response to amino
            acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IPI]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
            SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
            GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
            GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
            InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
            PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
            GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
            KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
            EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
            RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
            DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
            PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
            KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
            Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
            GO:GO:0031496 Uniprot:P22082
        Length = 1703

 Score = 377 (137.8 bits), Expect = 3.0e-33, P = 3.0e-33
 Identities = 91/230 (39%), Positives = 133/230 (57%)

Query:    15 KLEKMR-LQNILMQLRKCSNHPYLFDGAEP--GPPYTTDEHLVFNSGKMVVLDKLLPKLK 71
             K+  +R   N +MQL+K  NHP++F+  E    P   T++ +   +GK  +LD++LPKLK
Sbjct:  1041 KMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLK 1100

Query:    72 AQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFM 131
             A   RVLIF QMT+++DI+ED+  +   KY RLDG T  ++R   +  FN   S+   F+
Sbjct:  1101 ATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFI 1160

Query:   132 LSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR--------EAKILRRGSIKKALEA 183
             LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R        E +ILR  +     E 
Sbjct:  1161 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEV 1220

Query:   184 KMSR-YRA-PFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQ 231
              + R Y+        I  G    K+ +EE++  L   LD   A E+R+++
Sbjct:  1221 ILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLD---AEEERRKK 1267

 Score = 207 (77.9 bits), Expect = 2.6e-14, P = 2.6e-14
 Identities = 43/105 (40%), Positives = 64/105 (60%)

Query:   181 LEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYL---YCRLDGQTAHEDRQRQINDFNM 237
             L+  + + +A  H++ I +   +  +  E+  RY+   Y RLDG T  ++R   +  FN 
Sbjct:  1092 LDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNA 1151

Query:   238 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
               S+   F+LSTRAGGLG+NL TAD V+++D+DWNP  DLQA  R
Sbjct:  1152 PDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 1196


>RGD|1310969 [details] [associations]
            symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
            "Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
            segregation" evidence=ISO] [GO:0000724 "double-strand break repair
            via homologous recombination" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
            evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
            "chromatin remodeling" evidence=ISO] [GO:0010571 "positive
            regulation of DNA replication involved in S phase" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
            regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
            complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
            evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
            [GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0051225 "spindle assembly"
            evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
            [GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
            [GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
            evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
            GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
            IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
            Uniprot:D4A6Q6
        Length = 1553

 Score = 336 (123.3 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1091 ESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1150

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1151 SERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1209

Query:   171 I 171
             +
Sbjct:  1210 L 1210

 Score = 215 (80.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +  AL+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1090 KESLITDSGKLY-ALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1148

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1149 KISERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1206

 Score = 70 (29.7 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   801 LMNLVMQFRKVCNHPELFERQETWSPF 827


>UNIPROTKB|Q9ULG1 [details] [associations]
            symbol:INO80 "DNA helicase INO80" species:9606 "Homo
            sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
            [GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
            [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
            response to UV" evidence=IMP] [GO:0000724 "double-strand break
            repair via homologous recombination" evidence=IMP] [GO:0070914
            "UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
            response to ionizing radiation" evidence=IMP] [GO:0006302
            "double-strand break repair" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0030307 "positive regulation of cell growth"
            evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
            cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
            replication involved in S phase" evidence=IMP] [GO:0043014
            "alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
            assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
            GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
            GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
            GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
            GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
            GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
            EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
            RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
            SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
            PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
            Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
            KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
            HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
            HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
            OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
            ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
            Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
        Length = 1556

 Score = 336 (123.3 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1094 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1153

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1154 SERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1212

Query:   171 I 171
             +
Sbjct:  1213 L 1213

 Score = 215 (80.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +  AL+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1093 KESLITDSGKLY-ALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1151

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1152 KISERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1209

 Score = 70 (29.7 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   805 LMNLVMQFRKVCNHPELFERQETWSPF 831


>UNIPROTKB|F1PKX5 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000045 "regulation of G1/S transition of
            mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
            ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
            repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
            Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
            Uniprot:F1PKX5
        Length = 1560

 Score = 336 (123.3 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1098 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1157

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1158 SERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1216

Query:   171 I 171
             +
Sbjct:  1217 L 1217

 Score = 215 (80.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +  AL+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1097 KESLITDSGKLY-ALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1155

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1156 KISERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1213

 Score = 70 (29.7 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   808 LMNLVMQFRKVCNHPELFERQETWSPF 834


>UNIPROTKB|F1SSV0 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
            cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
            radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
            binding" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
            "positive regulation of cell growth" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
            DNA replication involved in S phase" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
            GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
            GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
            GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
            GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
            Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
            Uniprot:F1SSV0
        Length = 1566

 Score = 336 (123.3 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1104 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1163

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1164 SERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1222

Query:   171 I 171
             +
Sbjct:  1223 L 1223

 Score = 215 (80.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +  AL+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1103 KESLITDSGKLY-ALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1161

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1162 KISERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1219

 Score = 70 (29.7 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   814 LMNLVMQFRKVCNHPELFERQETWSPF 840


>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
            symbol:PFB0730w "DNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
            activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
            GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
            PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
            EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
            EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
        Length = 1997

 Score = 248 (92.4 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
 Identities = 55/117 (47%), Positives = 75/117 (64%)

Query:     5 KDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLD 64
             K    VN  G +     QNI+MQLRK  NHPYLF        Y  DE+++  SGK  VLD
Sbjct:  1145 KGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFLY-----DYNIDENIIKCSGKFEVLD 1199

Query:    65 KLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             ++LPKL   + +VLIFSQMT++++IL DY  +RG+KY RLDG    ++R++ I+ FN
Sbjct:  1200 RMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256

 Score = 161 (61.7 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
 Identities = 35/76 (46%), Positives = 51/76 (67%)

Query:   111 EDRQRQINDF------NMEGS--DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 162
             E ++ +INDF      N+ G   D  IF+LSTR+G LG+NL TAD V+++DSD+NP  D+
Sbjct:  1379 ELKKEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDI 1438

Query:   163 QAMVREAKILRRGSIK 178
             QAM R  +I ++  +K
Sbjct:  1439 QAMCRCHRIGQKNVVK 1454

 Score = 156 (60.0 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 33/65 (50%), Positives = 45/65 (69%)

Query:   226 EDRQRQINDF------NMEGS--DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 277
             E ++ +INDF      N+ G   D  IF+LSTR+G LG+NL TAD V+++DSD+NP  D+
Sbjct:  1379 ELKKEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDI 1438

Query:   278 QAMVR 282
             QAM R
Sbjct:  1439 QAMCR 1443


>UNIPROTKB|O96239 [details] [associations]
            symbol:PFB0730w "DEAD/DEAH box helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
            activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
            [GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
            GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
            RefSeq:XP_001349665.1 ProteinModelPortal:O96239
            EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
            EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
        Length = 1997

 Score = 248 (92.4 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
 Identities = 55/117 (47%), Positives = 75/117 (64%)

Query:     5 KDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLD 64
             K    VN  G +     QNI+MQLRK  NHPYLF        Y  DE+++  SGK  VLD
Sbjct:  1145 KGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFLY-----DYNIDENIIKCSGKFEVLD 1199

Query:    65 KLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFN 121
             ++LPKL   + +VLIFSQMT++++IL DY  +RG+KY RLDG    ++R++ I+ FN
Sbjct:  1200 RMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256

 Score = 161 (61.7 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
 Identities = 35/76 (46%), Positives = 51/76 (67%)

Query:   111 EDRQRQINDF------NMEGS--DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 162
             E ++ +INDF      N+ G   D  IF+LSTR+G LG+NL TAD V+++DSD+NP  D+
Sbjct:  1379 ELKKEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDI 1438

Query:   163 QAMVREAKILRRGSIK 178
             QAM R  +I ++  +K
Sbjct:  1439 QAMCRCHRIGQKNVVK 1454

 Score = 156 (60.0 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 33/65 (50%), Positives = 45/65 (69%)

Query:   226 EDRQRQINDF------NMEGS--DIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 277
             E ++ +INDF      N+ G   D  IF+LSTR+G LG+NL TAD V+++DSD+NP  D+
Sbjct:  1379 ELKKEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDI 1438

Query:   278 QAMVR 282
             QAM R
Sbjct:  1439 QAMCR 1443


>UNIPROTKB|F1NYY9 [details] [associations]
            symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0010571 "positive
            regulation of DNA replication involved in S phase" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
            regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
            complex" evidence=IEA] [GO:0034644 "cellular response to UV"
            evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
            assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
            evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
            evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
            cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0000724 "double-strand break repair
            via homologous recombination" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
            GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
            GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
            GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
            GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
            OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
            Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
        Length = 1564

 Score = 334 (122.6 bits), Expect = 5.8e-33, Sum P(2) = 5.8e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1102 ESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1161

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1162 SERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1220

Query:   171 I 171
             +
Sbjct:  1221 L 1221

 Score = 215 (80.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
 Identities = 49/119 (41%), Positives = 72/119 (60%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +  AL+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1101 KESLITDSGKLH-ALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1159

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1160 KISERRDMVADFQNR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1217

 Score = 70 (29.7 bits), Expect = 5.8e-33, Sum P(2) = 5.8e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   810 LMNLVMQFRKVCNHPELFERQETWSPF 836


>ZFIN|ZDB-GENE-041014-72 [details] [associations]
            symbol:ino80 "INO80 homolog (S. cerevisiae)"
            species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
            HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
            UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
            InParanoid:Q5RGG8 Uniprot:Q5RGG8
        Length = 1582

 Score = 335 (123.0 bits), Expect = 9.7e-33, Sum P(2) = 9.7e-33
 Identities = 66/121 (54%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ +SGK+  LD LL +LK+Q  RVLI+SQMTRM+D+LE+Y  +R   Y RLDG +  
Sbjct:  1125 ESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1184

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
              +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1185 SERRDMVADFQSR-TDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1243

Query:   171 I 171
             +
Sbjct:  1244 L 1244

 Score = 212 (79.7 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
 Identities = 48/119 (40%), Positives = 71/119 (59%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQT 223
             +E+ I   G +   L+  ++R ++  H++ I     +  +  EE     ++ Y RLDG +
Sbjct:  1124 KESLITDSGKLH-TLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSS 1182

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                +R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1183 KISERRDMVADFQSR-TDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1240

 Score = 67 (28.6 bits), Expect = 9.7e-33, Sum P(2) = 9.7e-33
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             L N++MQ RK  NHP LF+  E   P+
Sbjct:   806 LMNLVMQFRKVCNHPDLFERQEIRSPF 832

 Score = 41 (19.5 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
 Identities = 16/48 (33%), Positives = 20/48 (41%)

Query:    10 VNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNS 57
             V G G+LEK+ L +    L    N P  F      P     + LVF S
Sbjct:   942 VKGRGRLEKLCLSH--RDLILWLNRPTSFPNVHSSPVL---QDLVFTS 984

 Score = 37 (18.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query:    81 SQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             S  T   + L+D    R  K+ RL     H DR+ Q
Sbjct:   153 SDFTMTREELQDML--RLHKFTRLHQSKFHSDRELQ 186


>WB|WBGene00007053 [details] [associations]
            symbol:chd-7 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
            Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
            SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
            SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
            EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
            EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
            UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
            InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
        Length = 2967

 Score = 375 (137.1 bits), Expect = 9.9e-33, P = 9.9e-33
 Identities = 83/197 (42%), Positives = 121/197 (61%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPG---------PPYTTDE--H--LVFNSGKMVVLDKLL 67
             L N++M+LRKC NHP+L +GAE           P +  +   H  L+  SGK+V+++KLL
Sbjct:  1471 LMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIEKLL 1530

Query:    68 PKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDI 127
             PKL+    +VLIFSQM ++LD+LE++     + + R+DG    + RQ  I+ F+ E SD 
Sbjct:  1531 PKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDR 1590

Query:   128 FIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIKKALEAKMSR 187
             F+F+L TRAGGLGINL  AD V+++DSDWNPQ DLQA  R  +I ++  +K       + 
Sbjct:  1591 FVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNT 1650

Query:   188 Y-RAPFHQLRIAYGANK 203
             Y R  F +  +  G +K
Sbjct:  1651 YEREMFDKASLKLGLDK 1667

 Score = 219 (82.2 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 51/129 (39%), Positives = 72/129 (55%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDR 213
             +P  D + +  +A I   G +   +E  + + R   H++ I     K  +  EE      
Sbjct:  1503 HPDWDEETLAHKALIQASGKVV-LIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMS 1561

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y + R+DG    + RQ  I+ F+ E SD F+F+L TRAGGLGINL  AD V+++DSDWNP
Sbjct:  1562 YPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNP 1621

Query:   274 QMDLQAMVR 282
             Q DLQA  R
Sbjct:  1622 QNDLQAQAR 1630


>TAIR|locus:2116747 [details] [associations]
            symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
            IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
            ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
            EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
            OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
        Length = 1202

 Score = 369 (135.0 bits), Expect = 1.2e-32, P = 1.2e-32
 Identities = 78/169 (46%), Positives = 110/169 (65%)

Query:    15 KLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEH--LVFNSGKMVVLDKLLPKLKA 72
             K    ++ N+LM+LR+  +HPYL    EP      +    L+  SGK+ +LDK++ KLK 
Sbjct:   479 KKRDAKISNVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKE 538

Query:    73 QESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFML 132
             Q  RVLI++Q    L +LEDY  ++ + Y R+DG+ +  +RQ +I+ FN E S+ F F+L
Sbjct:   539 QGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLL 598

Query:   133 STRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIKKAL 181
             STRAGG+GINLATAD V++YDSDWNP  DLQAM   A++ R G   K +
Sbjct:   599 STRAGGIGINLATADTVIIYDSDWNPHADLQAM---ARVHRLGQTNKVM 644

 Score = 229 (85.7 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 54/132 (40%), Positives = 78/132 (59%)

Query:   155 DWNPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE--- 211
             D+ P+ +  A     K+L      + L+  M + +   H++ I Y   +   Y  E+   
Sbjct:   504 DFEPRFE-DANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLI-YTQFQHTLYLLEDYFT 561

Query:   212 -DRYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSD 270
                + Y R+DG+ +  +RQ +I+ FN E S+ F F+LSTRAGG+GINLATAD V++YDSD
Sbjct:   562 FKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSD 621

Query:   271 WNPQMDLQAMVR 282
             WNP  DLQAM R
Sbjct:   622 WNPHADLQAMAR 633


>ASPGD|ASPL0000048785 [details] [associations]
            symbol:AN1956 species:162425 "Emericella nidulans"
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
            heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
            body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
            evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
            evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030466 "chromatin silencing at silent mating-type cassette"
            evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
            [GO:0030702 "chromatin silencing at centromere" evidence=IEA]
            InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
            InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
            SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
            Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
            GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
            EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
            OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
            EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
            HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
        Length = 1443

 Score = 367 (134.2 bits), Expect = 2.7e-32, P = 2.7e-32
 Identities = 74/164 (45%), Positives = 107/164 (65%)

Query:    17 EKMRLQNILMQLRKCSNHPYLFDGA---EPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQ 73
             E+  L NILMQLRKC  HP++F  A       P     +LV  +GK+ +L+ +LPKL+A+
Sbjct:   878 ERHNLNNILMQLRKCLCHPFIFSKAIEERTDDPEVAHRNLVDAAGKLQLLELMLPKLQAR 937

Query:    74 ESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLS 133
               RVL+FSQ    LD++ED+    G  + RLDG+    ++QR I+D+N E S  F F+LS
Sbjct:   938 GHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFAFLLS 997

Query:   134 TRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
             TR+GG+GINLATAD V++ D D+NP  D+QA+ R  +I ++  +
Sbjct:   998 TRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKV 1041

 Score = 196 (74.1 bits), Expect = 9.7e-13, P = 9.7e-13
 Identities = 36/65 (55%), Positives = 49/65 (75%)

Query:   218 RLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 277
             RLDG+    ++QR I+D+N E S  F F+LSTR+GG+GINLATAD V++ D D+NP  D+
Sbjct:   967 RLDGRMTSLEKQRMIDDYNAENSPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDM 1026

Query:   278 QAMVR 282
             QA+ R
Sbjct:  1027 QALSR 1031


>WB|WBGene00004204 [details] [associations]
            symbol:swsn-4 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
            InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
            Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
            PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
            SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
            GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
            PROSITE:PS00633 InterPro:IPR018359 KO:K11647
            GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
            RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
            SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
            KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
            Uniprot:G5EF53
        Length = 1474

 Score = 367 (134.2 bits), Expect = 2.8e-32, P = 2.8e-32
 Identities = 74/164 (45%), Positives = 107/164 (65%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPG--PPYTTDE----HLVFNSGKMVVLDKLLPKLKAQE 74
             L N ++ LRK  NHP+LF   E      +  +E     L+  +GK+ +LD++LPKLKA  
Sbjct:   807 LMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNEVNGTDLMRVAGKLELLDRILPKLKATG 866

Query:    75 SRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLST 134
              R+L+F QMT M++I ED+  +R + Y RLDG T  ++R   +  FN   SD+F+FMLST
Sbjct:   867 HRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLST 926

Query:   135 RAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             RAGGLG+NL TAD V+++DSDWNP  D+QA  R  +I ++  ++
Sbjct:   927 RAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVR 970

 Score = 231 (86.4 bits), Expect = 8.5e-18, P = 8.5e-18
 Identities = 48/120 (40%), Positives = 70/120 (58%)

Query:   166 VREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQ 222
             V    ++R     + L+  + + +A  H++ + +      N  E+     RY Y RLDG 
Sbjct:   840 VNGTDLMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGS 899

Query:   223 TAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             T  ++R   +  FN   SD+F+FMLSTRAGGLG+NL TAD V+++DSDWNP  D+QA  R
Sbjct:   900 TKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDR 959


>DICTYBASE|DDB_G0285205 [details] [associations]
            symbol:snf2a "SNF2-related protein SNF2a"
            species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
            EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
            ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
            EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
            OMA:HASKHRV Uniprot:Q54NM0
        Length = 1604

 Score = 361 (132.1 bits), Expect = 1.4e-31, P = 1.4e-31
 Identities = 77/177 (43%), Positives = 113/177 (63%)

Query:     2 VLMKDIDVVNG-AGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKM 60
             VL  D D   G +G+L+     NI+ QL+K  NHPYLF        +  +E L+  SGK 
Sbjct:   886 VLPIDPDSKEGRSGRLKMKGFNNIVKQLQKICNHPYLFKDE-----WDINEDLIRTSGKF 940

Query:    61 VVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDF 120
               +D++L K+ A + RVLIF+QMT +++++E+Y   + + + RLDG T  E+R   + ++
Sbjct:   941 DTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEW 1000

Query:   121 NMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSI 177
             N   S  +IF+LST AGGLG+NL TAD V+++DSDWNPQMDLQA  R  +I +  S+
Sbjct:  1001 NRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSV 1057

 Score = 206 (77.6 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 45/115 (39%), Positives = 67/115 (58%)

Query:   171 ILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQTAHED 227
             ++R       ++  +++  A  H++ I     +  N  EE      + + RLDG T  E+
Sbjct:   933 LIRTSGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEE 992

Query:   228 RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             R   + ++N   S  +IF+LST AGGLG+NL TAD V+++DSDWNPQMDLQA  R
Sbjct:   993 RAHLVVEWNRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDR 1047


>WB|WBGene00010369 [details] [associations]
            symbol:chd-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] InterPro:IPR000330
            InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
            PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
            GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
            InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
            InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
            KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
            RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
            STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
            KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
            InParanoid:O17909 NextBio:875487 Uniprot:O17909
        Length = 1461

 Score = 356 (130.4 bits), Expect = 4.1e-31, P = 4.1e-31
 Identities = 77/152 (50%), Positives = 103/152 (67%)

Query:    23 NILMQLRKCSNHPYL---FDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLI 79
             N++M+L+KC NH  L   +D           + L+ +SGK+++LDKLL +LK +  RVLI
Sbjct:   674 NLVMELKKCCNHASLTRQYDHIYDDAQGRLQQ-LLKSSGKLILLDKLLCRLKDKGHRVLI 732

Query:    80 FSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGL 139
             FSQM  MLDIL++Y   R F   RLDG    + R++ ++ +N  GS  F F+LSTRAGGL
Sbjct:   733 FSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGL 792

Query:   140 GINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             GINLATAD V+++DSDWNPQ DLQAM R  +I
Sbjct:   793 GINLATADTVIIFDSDWNPQNDLQAMSRAHRI 824

 Score = 208 (78.3 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
 Identities = 40/65 (61%), Positives = 50/65 (76%)

Query:   218 RLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 277
             RLDG    + R++ ++ +N  GS  F F+LSTRAGGLGINLATAD V+++DSDWNPQ DL
Sbjct:   756 RLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 815

Query:   278 QAMVR 282
             QAM R
Sbjct:   816 QAMSR 820

 Score = 38 (18.4 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query:   101 YCRLDGQTAHEDRQRQINDFN 121
             + + DG++ H+ R  Q+   N
Sbjct:   394 FLKTDGESTHKLRDYQLEGLN 414


>ASPGD|ASPL0000056677 [details] [associations]
            symbol:AN1024 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
            recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
            Uniprot:C8VTY9
        Length = 868

 Score = 350 (128.3 bits), Expect = 7.1e-31, P = 7.1e-31
 Identities = 75/158 (47%), Positives = 101/158 (63%)

Query:    15 KLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQE 74
             ++ + ++QN +MQ R   N P+ F       P + DE LV  SGKM++LD+L+P L  + 
Sbjct:   583 EIAQKKMQNPVMQARLACNSPHNFYWPWAEDPSSIDETLVTASGKMLLLDRLIPCLLNKG 642

Query:    75 SRVLIFSQMTRMLDILEDYC-YWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLS 133
              ++LIFSQ    LDIL+D+  + R +  CR+DG  +  DRQ QI  FN +  D  IF+LS
Sbjct:   643 HKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNTD-KDYKIFLLS 701

Query:   134 TRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             TRAGG GINL  AD V+L+DSDWNPQ DLQA  R  +I
Sbjct:   702 TRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRI 739

 Score = 208 (78.3 bits), Expect = 7.1e-15, P = 7.1e-15
 Identities = 41/66 (62%), Positives = 47/66 (71%)

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
             CR+DG  +  DRQ QI  FN +  D  IF+LSTRAGG GINL  AD V+L+DSDWNPQ D
Sbjct:   671 CRIDGAISQADRQAQIKAFNTD-KDYKIFLLSTRAGGQGINLVAADTVILFDSDWNPQQD 729

Query:   277 LQAMVR 282
             LQA  R
Sbjct:   730 LQAQDR 735


>WB|WBGene00016868 [details] [associations]
            symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
            PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
            ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
            EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
            UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
            NextBio:910548 Uniprot:Q22944
        Length = 1336

 Score = 351 (128.6 bits), Expect = 1.2e-30, P = 1.2e-30
 Identities = 72/176 (40%), Positives = 107/176 (60%)

Query:     9 VVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFN------SGKMVV 62
             +++G        L+N ++ LRK  NHP+LF+  E       D   +        SGK+ +
Sbjct:   628 LLDGKTNTGSKSLRNTMIHLRKLCNHPFLFENVEESCRNFWDARFISAVDLYRVSGKLEL 687

Query:    63 LDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNM 122
             L ++LPKL+A   RVL+F QMT M+ I+ED+      +Y RLDG T  ++R   ++ FN 
Sbjct:   688 LSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNA 747

Query:   123 EGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
               S+ F+FMLSTRAGGLG+NL TAD V+++DSDWNP  D+QA  R  +I ++  ++
Sbjct:   748 PNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVR 803

 Score = 210 (79.0 bits), Expect = 3.9e-15, P = 3.9e-15
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             Y RLDG T  ++R   ++ FN   S+ F+FMLSTRAGGLG+NL TAD V+++DSDWNP  
Sbjct:   726 YLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQ 785

Query:   276 DLQAMVR 282
             D+QA  R
Sbjct:   786 DMQAQDR 792


>DICTYBASE|DDB_G0292358 [details] [associations]
            symbol:ino80 "CHR group protein" species:44689
            "Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
            on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
            [GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
            repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
            evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
            GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
            GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
            STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
            GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
            ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
        Length = 2129

 Score = 321 (118.1 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
 Identities = 73/166 (43%), Positives = 104/166 (62%)

Query:    56 NSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQR 115
             +SGK+ VLDKLL  LK    RVLI+SQ T+M++ILED+  +R +KY RLDG +  +DR+ 
Sbjct:  1765 DSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRD 1824

Query:   116 QINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI---- 171
              ++DF  + S IF F+LSTRA G+GINL +AD V+ YDSDWNP +D QA  R  ++    
Sbjct:  1825 MVDDFQSDPS-IFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTR 1883

Query:   172 ---LRRGSIKKALEAKMSRYRAPFHQLR-IAYGANKGKNYTEEEDR 213
                + R   K  +E K+ +     HQ++ I     K ++  EE D+
Sbjct:  1884 PVTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFESNPEELDQ 1929

 Score = 196 (74.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             +Y Y RLDG +  +DR+  ++DF  + S IF F+LSTRA G+GINL +AD V+ YDSDWN
Sbjct:  1807 KYKYLRLDGSSKLDDRRDMVDDFQSDPS-IFAFLLSTRACGIGINLTSADTVIFYDSDWN 1865

Query:   273 PQMDLQAMVR 282
             P +D QA  R
Sbjct:  1866 PTVDEQAQDR 1875

 Score = 62 (26.9 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query:     8 DVVNGAGKLEK--MR-LQNILMQLRKCSNHPYLFDGAEPGPPY 47
             +++ GA   E+  M+ L N +MQ RK  NHP  F  +E   P+
Sbjct:  1430 ELLGGASFSEQGSMKALMNFVMQFRKVCNHPETFKRSECESPF 1472


>POMBASE|SPAC29B12.01 [details] [associations]
            symbol:ino80 "SNF2 family helicase Ino80" species:4896
            "Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
            EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
            RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
            EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
            OMA:INDHNSA NextBio:20811604 Uniprot:O14148
        Length = 1604

 Score = 319 (117.4 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
 Identities = 61/118 (51%), Positives = 85/118 (72%)

Query:    54 VFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDR 113
             + +SGK+  LDKLL +LKA + RVLI+ QMTRM+D++E+Y  +R +KY RLDG +    R
Sbjct:  1425 IADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQR 1484

Query:   114 QRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKI 171
             +  + ++     ++F+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +I
Sbjct:  1485 RDMVTEWQTR-PELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRI 1541

 Score = 198 (74.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
 Identities = 44/111 (39%), Positives = 65/111 (58%)

Query:   175 GSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQTAHEDRQRQ 231
             G + K L+  +   +A  H++ I +   +  +  EE     +Y Y RLDG +    R+  
Sbjct:  1429 GKLSK-LDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDM 1487

Query:   232 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             + ++     ++F+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1488 VTEWQTR-PELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDR 1537

 Score = 60 (26.2 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPP 46
             + N++MQ RK  NHP LF+  +   P
Sbjct:  1127 IMNLVMQFRKVCNHPDLFEREDVRSP 1152


>UNIPROTKB|Q6ZRS2 [details] [associations]
            symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
            "protein complex" evidence=IDA] [GO:0003713 "transcription
            coactivator activity" evidence=TAS] [GO:0004402 "histone
            acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=TAS]
            [GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
            GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
            PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
            GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
            EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
            EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
            RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
            SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
            PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
            DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
            Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
            KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
            GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
            HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
            Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
            InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
            ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
            Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
        Length = 3230

 Score = 301 (111.0 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
 Identities = 64/119 (53%), Positives = 80/119 (67%)

Query:    50 DEHLV-FNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             D  L+ ++ GK+  L  LL +LKA+  RVLIF+QMTRMLD+LE +  + G  Y RLDG T
Sbjct:  2034 DLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGST 2093

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
               E RQ  +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP MD QA  R
Sbjct:  2094 RVEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2151

 Score = 197 (74.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 40/69 (57%), Positives = 47/69 (68%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             +LY RLDG T  E RQ  +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP
Sbjct:  2084 HLYLRLDGSTRVEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNP 2142

Query:   274 QMDLQAMVR 282
              MD QA  R
Sbjct:  2143 TMDAQAQDR 2151

 Score = 82 (33.9 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query:    19 MRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVV 62
             M + NILMQLRK  NHP LFD      P+ T   + F++  +V+
Sbjct:   888 MSVINILMQLRKVCNHPNLFDPRPVTSPFITPG-ICFSTASLVL 930


>UNIPROTKB|F1RG74 [details] [associations]
            symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
            GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
            GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
            Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
        Length = 3230

 Score = 301 (111.0 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
 Identities = 64/119 (53%), Positives = 80/119 (67%)

Query:    50 DEHLV-FNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             D  L+ ++ GK+  L  LL +LKA+  RVLIF+QMTRMLD+LE +  + G  Y RLDG T
Sbjct:  2034 DLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGST 2093

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
               E RQ  +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP MD QA  R
Sbjct:  2094 RVEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2151

 Score = 197 (74.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 40/69 (57%), Positives = 47/69 (68%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             +LY RLDG T  E RQ  +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP
Sbjct:  2084 HLYLRLDGSTRVEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNP 2142

Query:   274 QMDLQAMVR 282
              MD QA  R
Sbjct:  2143 TMDAQAQDR 2151

 Score = 82 (33.9 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query:    19 MRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVV 62
             M + NILMQLRK  NHP LFD      P+ T   + F++  +V+
Sbjct:   895 MSVINILMQLRKVCNHPNLFDPRPVTSPFITPG-ICFSTASLVL 937


>UNIPROTKB|E1BC33 [details] [associations]
            symbol:LOC788113 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
            PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
            PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
            EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
            Uniprot:E1BC33
        Length = 3242

 Score = 301 (111.0 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
 Identities = 64/119 (53%), Positives = 80/119 (67%)

Query:    50 DEHLV-FNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             D  L+ ++ GK+  L  LL +LKA+  RVLIF+QMTRMLD+LE +  + G  Y RLDG T
Sbjct:  2045 DLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGST 2104

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
               E RQ  +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP MD QA  R
Sbjct:  2105 RVEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2162

 Score = 197 (74.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 40/69 (57%), Positives = 47/69 (68%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             +LY RLDG T  E RQ  +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP
Sbjct:  2095 HLYLRLDGSTRVEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNP 2153

Query:   274 QMDLQAMVR 282
              MD QA  R
Sbjct:  2154 TMDAQAQDR 2162

 Score = 82 (33.9 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query:    19 MRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVV 62
             M + NILMQLRK  NHP LFD      P+ T   + F++  +V+
Sbjct:   896 MSVINILMQLRKVCNHPNLFDPRPVTSPFITPG-ICFSTASLVL 938


>SGD|S000003118 [details] [associations]
            symbol:INO80 "ATPase and nucleosome spacing factor"
            species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0043486 "histone exchange"
            evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
            acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043618 "regulation of transcription from RNA polymerase II
            promoter in response to stress" evidence=IMP] [GO:0016584
            "nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
            evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
            PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
            GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
            GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
            GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
            GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
            EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
            SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
            STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
            GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
            NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
            Uniprot:P53115
        Length = 1489

 Score = 309 (113.8 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
 Identities = 59/121 (48%), Positives = 86/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             +  +  S K+  LD+LL KLK++  RVLI+ QMT+M+D++E+Y  +R + + RLDG +  
Sbjct:  1292 DRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKL 1351

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
             EDR+  ++D+     +IF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1352 EDRRDLVHDWQTN-PEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHR 1410

Query:   171 I 171
             +
Sbjct:  1411 L 1411

 Score = 210 (79.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
 Identities = 47/115 (40%), Positives = 70/115 (60%)

Query:   171 ILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQTAHED 227
             I     ++K L+  + + ++  H++ I +   K  +  EE     +Y + RLDG +  ED
Sbjct:  1295 ITESAKLRK-LDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLED 1353

Query:   228 RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             R+  ++D+     +IF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1354 RRDLVHDWQTN-PEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDR 1407

 Score = 66 (28.3 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPYT 48
             L N +MQ RK  NHP LF+ A+   P++
Sbjct:  1000 LINAVMQFRKVCNHPDLFERADVDSPFS 1027


>SGD|S000001934 [details] [associations]
            symbol:IRC5 "Putative ATPase containing the DEAD/H
            helicase-related sequence motif" species:4932 "Saccharomyces
            cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
            RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
            DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
            PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
            CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
            Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
        Length = 853

 Score = 341 (125.1 bits), Expect = 6.3e-30, P = 6.3e-30
 Identities = 72/153 (47%), Positives = 98/153 (64%)

Query:    15 KLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQE 74
             ++   +LQN++MQLR+  +  +LF      P   T E L+  SGK+ +L KL+P L ++ 
Sbjct:   560 EISNKKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEG 619

Query:    75 SRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLST 134
              +VLI+SQ   MLD++ED+C    F   R+DG   +E R+ Q+  FN       IF+LST
Sbjct:   620 HKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLST 679

Query:   135 RAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             RA GLGINL  AD VVL+DSDWNPQ+DLQAM R
Sbjct:   680 RAAGLGINLVGADTVVLFDSDWNPQVDLQAMDR 712

 Score = 193 (73.0 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 39/65 (60%), Positives = 46/65 (70%)

Query:   218 RLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDL 277
             R+DG   +E R+ Q+  FN       IF+LSTRA GLGINL  AD VVL+DSDWNPQ+DL
Sbjct:   648 RIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDL 707

Query:   278 QAMVR 282
             QAM R
Sbjct:   708 QAMDR 712


>RGD|1565642 [details] [associations]
            symbol:Srcap "Snf2-related CREBBP activator protein"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
            [GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
            GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
            InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
            IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
            ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
        Length = 3182

 Score = 298 (110.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
 Identities = 62/111 (55%), Positives = 76/111 (68%)

Query:    57 SGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQ 116
             +GK+  L  LL +LKA+  RVLIF+QMTRMLD+LE +  + G  Y RLDG T  E RQ  
Sbjct:  2030 AGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2089

Query:   117 INDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP MD QA  R
Sbjct:  2090 MERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDR 2139

 Score = 197 (74.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 40/69 (57%), Positives = 47/69 (68%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             +LY RLDG T  E RQ  +  FN +   IF F+LSTR+GG+G+NL  AD VV YDSDWNP
Sbjct:  2072 HLYLRLDGSTRVEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNP 2130

Query:   274 QMDLQAMVR 282
              MD QA  R
Sbjct:  2131 TMDAQAQDR 2139

 Score = 82 (33.9 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query:    19 MRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVV 62
             M + NILMQLRK  NHP LFD      P+ T   + F++  +V+
Sbjct:   898 MSVINILMQLRKVCNHPNLFDPRPVTSPFITPG-ICFSTASLVL 940


>TAIR|locus:2062999 [details] [associations]
            symbol:BRM "AT2G46020" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
            "helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0010199 "organ boundary specification between
            lateral organs and the meristem" evidence=IGI] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
            "regulation of gene expression, epigenetic" evidence=RCA;IMP]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
            InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
            PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
            GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
            EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
            Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
            EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
            RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
            ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
            PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
            KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
            InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
            ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
            GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
        Length = 2193

 Score = 343 (125.8 bits), Expect = 1.7e-29, P = 1.7e-29
 Identities = 88/220 (40%), Positives = 130/220 (59%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPYTTD---EHLVFNSGKMVVLDKLLPKLKAQESRV 77
             L N  M+LRK  NHP L        PY  D   + LV + GK+ +LD++L KL+    RV
Sbjct:  1274 LNNRCMELRKACNHPLL------NYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRV 1327

Query:    78 LIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAG 137
             L+FS MT++LDILE+Y  WR   Y R+DG T+ EDR+  I DFN   +D FIF+LS RA 
Sbjct:  1328 LLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAA 1387

Query:   138 GLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK----KALEAKMSRYRAPFH 193
             G G+NL TAD VV+YD D NP+ + QA+ R  +I +   +K    +A+  K+S ++    
Sbjct:  1388 GRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKE-D 1446

Query:   194 QLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQIN 233
             +LR   G+   ++    +DRY+   ++G   +  +Q +I+
Sbjct:  1447 ELRSG-GSVDLEDDMAGKDRYIGS-IEGLIRNNIQQYKID 1484

 Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 38/70 (54%), Positives = 49/70 (70%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             R +Y R+DG T+ EDR+  I DFN   +D FIF+LS RA G G+NL TAD VV+YD D N
Sbjct:  1348 RLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPN 1407

Query:   273 PQMDLQAMVR 282
             P+ + QA+ R
Sbjct:  1408 PKNEEQAVAR 1417


>FB|FBgn0032157 [details] [associations]
            symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
            melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
            GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 KO:K14439
            GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
            RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
            UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
            STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
            KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
            InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
            Bgee:Q9VL72 Uniprot:Q9VL72
        Length = 844

 Score = 314 (115.6 bits), Expect = 3.4e-29, Sum P(2) = 3.4e-29
 Identities = 65/114 (57%), Positives = 83/114 (72%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             ++L+ +SGK + LD LLPKLKA+  RVL+FSQ T MLDI+E+Y   R F +CRLDG TA 
Sbjct:   645 DNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAV 704

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 164
               RQ  I DFN + S IF+F+LST+AGG+GINL  AD  V++D D+NP  D QA
Sbjct:   705 NVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQA 757

 Score = 181 (68.8 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
 Identities = 37/67 (55%), Positives = 48/67 (71%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ +CRLDG TA   RQ  I DFN + S IF+F+LST+AGG+GINL  AD  V++D D+N
Sbjct:   692 KFGFCRLDGATAVNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDIDFN 750

Query:   273 PQMDLQA 279
             P  D QA
Sbjct:   751 PYNDKQA 757

 Score = 46 (21.3 bits), Expect = 3.4e-29, Sum P(2) = 3.4e-29
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query:    24 ILMQLRKCSNHPYL 37
             I+M++R+ +NHP L
Sbjct:   573 IMMEMRRIANHPLL 586


>FB|FBgn0086613 [details] [associations]
            symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
            binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
            Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
            PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
            GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
            GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
            EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
            ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
            PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
            KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
            GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
            OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
            NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
        Length = 1638

 Score = 332 (121.9 bits), Expect = 1.7e-28, P = 1.7e-28
 Identities = 65/121 (53%), Positives = 87/121 (71%)

Query:    51 EHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAH 110
             E L+ ++GK+ VLD LL +LKA   RVLI+SQMT+M+D+LE+Y + R  +Y RLDG +  
Sbjct:  1149 ETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKI 1208

Query:   111 EDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAK 170
               R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R  +
Sbjct:  1209 SARRDMVADFQTR-ADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1267

Query:   171 I 171
             +
Sbjct:  1268 L 1268

 Score = 210 (79.0 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
 Identities = 50/119 (42%), Positives = 69/119 (57%)

Query:   167 REAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEE---EDRYLYCRLDGQT 223
             +E  I   G +   L+  ++R +A  H++ I     K  +  EE     ++ Y RLDG +
Sbjct:  1148 KETLITDAGKLF-VLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSS 1206

Query:   224 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
                 R+  + DF    +DIF+F+LSTRAGGLGINL  AD V+ YDSDWNP +D QAM R
Sbjct:  1207 KISARRDMVADFQTR-ADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1264

 Score = 70 (29.7 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
 Identities = 26/91 (28%), Positives = 39/91 (42%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPYT------TDEHLVFNSGKMVVLDKLLPKLK-AQ 73
             L N++MQ RK  NHP LF+  +   P+       T   L+   G   ++ ++LP  K   
Sbjct:   823 LMNLVMQFRKVCNHPELFERRDARSPFFMRCAEYTIPRLIHEEG---LIHRMLPSRKHLL 879

Query:    74 ESRVLIFSQMTRMLDILEDYCYWRGFKYCRL 104
              +R  IF        + ED      F + RL
Sbjct:   880 YNRFNIFKSEYIQRSLFEDVNVNSCFGFTRL 910


>POMBASE|SPAC11E3.01c [details] [associations]
            symbol:swr1 "SNF2 family helicase Swr1" species:4896
            "Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
            "ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
            EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
            GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
            OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
            ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
            GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
            Uniprot:O13682
        Length = 1288

 Score = 299 (110.3 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
 Identities = 69/150 (46%), Positives = 93/150 (62%)

Query:    50 DEHLV-FNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQT 108
             D+ L+ ++ GK+ VLD+LL  L +   RVLIF+QMT++LDILE +    G +Y RLDG T
Sbjct:   982 DKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGAT 1041

Query:   109 AHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVRE 168
               E RQ     FN +   I +F+LSTR+GGLGINL  AD V+ YDSDWNPQ+D QA  R 
Sbjct:  1042 KIEQRQILTERFNNDDK-IPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRS 1100

Query:   169 AKILRRGSIKKALEAKMSRYRAPFHQLRIA 198
              +I +   +   +   +S Y    + LR A
Sbjct:  1101 HRIGQTRDVH--IYRLISEYTVESNMLRRA 1128

 Score = 187 (70.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 39/68 (57%), Positives = 46/68 (67%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             Y RLDG T  E RQ     FN +   I +F+LSTR+GGLGINL  AD V+ YDSDWNPQ+
Sbjct:  1034 YLRLDGATKIEQRQILTERFNNDDK-IPVFILSTRSGGLGINLTGADTVIFYDSDWNPQL 1092

Query:   276 DLQAMVRT 283
             D QA  R+
Sbjct:  1093 DAQAQDRS 1100

 Score = 58 (25.5 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query:    19 MRLQNILMQLRKCSNHPYLFD 39
             M + N LMQLRK  NHP L +
Sbjct:   727 MSIINCLMQLRKVCNHPNLHE 747

 Score = 38 (18.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
 Identities = 16/60 (26%), Positives = 28/60 (46%)

Query:   149 VVLYDSDWNPQMDLQAMVREAKILRR-GSIKK----ALEAKMSRYRAPF-HQLRIAYGAN 202
             V L D D +P+   + + RE ++  R    +K      EA +   +AP  + + I+Y  N
Sbjct:    61 VSLEDGDHDPKEAKELVFREVQLRHRINEFRKKGYFTAEAPVELKKAPSSNNIPISYRDN 120


>TAIR|locus:2087780 [details] [associations]
            symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
            binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0009910 "negative regulation of flower development"
            evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
            [GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
            formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
            response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
            cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
            evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
            [GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
            adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0033043 "regulation of
            organelle organization" evidence=RCA] [GO:0045010 "actin
            nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
            evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
            [GO:0048765 "root hair cell differentiation" evidence=RCA]
            [GO:0071555 "cell wall organization" evidence=RCA]
            InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
            InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
            GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
            GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
            GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
            InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
            EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
            SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
            GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
            OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
            Uniprot:Q7X9V2
        Length = 2055

 Score = 297 (109.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 64/122 (52%), Positives = 79/122 (64%)

Query:    47 YTTDEHLV-FNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLD 105
             Y  D  L+ F+ GK+  L  LL KLK    R LIF+QMT+MLD+LE +    G+ Y RLD
Sbjct:  1063 YFPDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLD 1122

Query:   106 GQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAM 165
             G T  E+RQ  +  FN     IF+F+LSTR+GG+GINL  AD V+ YDSDWNP MD QA 
Sbjct:  1123 GSTPPEERQTLMQRFNTNPK-IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1181

Query:   166 VR 167
              R
Sbjct:  1182 DR 1183

 Score = 200 (75.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 40/69 (57%), Positives = 47/69 (68%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDG T  E+RQ  +  FN     IF+F+LSTR+GG+GINL  AD V+ YDSDWNP
Sbjct:  1116 YTYMRLDGSTPPEERQTLMQRFNTNPK-IFLFILSTRSGGVGINLVGADTVIFYDSDWNP 1174

Query:   274 QMDLQAMVR 282
              MD QA  R
Sbjct:  1175 AMDQQAQDR 1183

 Score = 65 (27.9 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 12/18 (66%), Positives = 15/18 (83%)

Query:    23 NILMQLRKCSNHPYLFDG 40
             +I+MQLRK  NHP LF+G
Sbjct:   810 SIIMQLRKVCNHPDLFEG 827


>WB|WBGene00010845 [details] [associations]
            symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
            ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
            GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
            GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
            RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
            EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
            WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
        Length = 989

 Score = 308 (113.5 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
 Identities = 62/118 (52%), Positives = 83/118 (70%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             +  +E L   SGK   LD +LP+++ +  +VLIFSQ T MLDILE Y   RG+ Y RLDG
Sbjct:   742 FLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDG 801

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA 164
             QT   DRQ  IN+FN+   D+F+F+LSTRAGGLGINL +A+ ++++D D+NP  D QA
Sbjct:   802 QTPVLDRQEMINEFNLS-KDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQA 858

 Score = 196 (74.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 38/66 (57%), Positives = 50/66 (75%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDGQT   DRQ  IN+FN+   D+F+F+LSTRAGGLGINL +A+ ++++D D+NP
Sbjct:   794 YSYKRLDGQTPVLDRQEMINEFNLS-KDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNP 852

Query:   274 QMDLQA 279
               D QA
Sbjct:   853 YNDKQA 858

 Score = 45 (20.9 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query:    25 LMQLRKCSNHPYL 37
             LM+LR+ +NHP L
Sbjct:   673 LMRLRQAANHPLL 685


>CGD|CAL0000801 [details] [associations]
            symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
            "cellular_component" evidence=ND] [GO:0006312 "mitotic
            recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
            EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
            RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
            GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
            Uniprot:Q5AJ72
        Length = 864

 Score = 323 (118.8 bits), Expect = 5.6e-28, P = 5.6e-28
 Identities = 98/274 (35%), Positives = 141/274 (51%)

Query:    19 MRLQNILM-QLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESRV 77
             ++LQN+ M QLR   N P+++       P      ++ NS K  VL++LLP L +   +V
Sbjct:   575 LKLQNLKMIQLRNICNSPFIYYNY----PILDQAEVIRNSAKFQVLNQLLPPLLSSGHKV 630

Query:    78 LIFSQMTRMLDILEDYCYWRGF---KYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLST 134
             LIF+Q T++LD+LED+         K CRLDG T H+ R  QI+ FN       +F+ ST
Sbjct:   631 LIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFN-NNPKFKVFLSST 689

Query:   135 RAGGLGINLATADVVVLYDSDWNPQMDLQAM--------VREAKILR---RGSIKKALEA 183
             RAGGLGINL  AD V+L D+DWNPQMDLQA+        +   KI R   + SI++ L +
Sbjct:   690 RAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLIS 749

Query:   184 KMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIF 243
             +    R    +L I  G  K  N+ ++          G   ++     IND  ME S I 
Sbjct:   750 RSGSKRF-LERLVIQMGQFKFSNFNKKLTAATTSNEQGAIKND---WSINDM-MELSKIH 804

Query:   244 IFMLSTRAGGLGINLATADV-VVLYDSDWNPQMD 276
                 ST+ G    + A  D  ++L D + +  +D
Sbjct:   805 F--KSTQNGQTSQDSAEEDEKILLSDQEIDELLD 836

 Score = 205 (77.2 bits), Expect = 2.5e-14, P = 2.5e-14
 Identities = 40/66 (60%), Positives = 47/66 (71%)

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
             CRLDG T H+ R  QI+ FN       +F+ STRAGGLGINL  AD V+L D+DWNPQMD
Sbjct:   658 CRLDGSTNHQIRDEQISQFN-NNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMD 716

Query:   277 LQAMVR 282
             LQA+ R
Sbjct:   717 LQAIDR 722


>UNIPROTKB|Q5AJ72 [details] [associations]
            symbol:CaO19.1720 "Putative uncharacterized protein"
            species:237561 "Candida albicans SC5314" [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000330
            InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
            GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
            RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
            GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
            Uniprot:Q5AJ72
        Length = 864

 Score = 323 (118.8 bits), Expect = 5.6e-28, P = 5.6e-28
 Identities = 98/274 (35%), Positives = 141/274 (51%)

Query:    19 MRLQNILM-QLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQESRV 77
             ++LQN+ M QLR   N P+++       P      ++ NS K  VL++LLP L +   +V
Sbjct:   575 LKLQNLKMIQLRNICNSPFIYYNY----PILDQAEVIRNSAKFQVLNQLLPPLLSSGHKV 630

Query:    78 LIFSQMTRMLDILEDYCYWRGF---KYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLST 134
             LIF+Q T++LD+LED+         K CRLDG T H+ R  QI+ FN       +F+ ST
Sbjct:   631 LIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFN-NNPKFKVFLSST 689

Query:   135 RAGGLGINLATADVVVLYDSDWNPQMDLQAM--------VREAKILR---RGSIKKALEA 183
             RAGGLGINL  AD V+L D+DWNPQMDLQA+        +   KI R   + SI++ L +
Sbjct:   690 RAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLIS 749

Query:   184 KMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCRLDGQTAHEDRQRQINDFNMEGSDIF 243
             +    R    +L I  G  K  N+ ++          G   ++     IND  ME S I 
Sbjct:   750 RSGSKRF-LERLVIQMGQFKFSNFNKKLTAATTSNEQGAIKND---WSINDM-MELSKIH 804

Query:   244 IFMLSTRAGGLGINLATADV-VVLYDSDWNPQMD 276
                 ST+ G    + A  D  ++L D + +  +D
Sbjct:   805 F--KSTQNGQTSQDSAEEDEKILLSDQEIDELLD 836

 Score = 205 (77.2 bits), Expect = 2.5e-14, P = 2.5e-14
 Identities = 40/66 (60%), Positives = 47/66 (71%)

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
             CRLDG T H+ R  QI+ FN       +F+ STRAGGLGINL  AD V+L D+DWNPQMD
Sbjct:   658 CRLDGSTNHQIRDEQISQFN-NNPKFKVFLSSTRAGGLGINLVAADTVILMDNDWNPQMD 716

Query:   277 LQAMVR 282
             LQA+ R
Sbjct:   717 LQAIDR 722


>POMBASE|SPBP35G2.10 [details] [associations]
            symbol:mit1 "SHREC complex subunit Mit1" species:4896
            "Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
            heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
            "nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
            activity" evidence=IDA] [GO:0019787 "small conjugating protein
            ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
            heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
            evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
            [GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
            InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
            PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
            SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
            GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
            GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
            GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
            Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
            SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
            GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
            HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
            GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
            ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
            GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
            NextBio:20802445 Uniprot:Q9P793
        Length = 1418

 Score = 325 (119.5 bits), Expect = 7.9e-28, P = 7.9e-28
 Identities = 74/174 (42%), Positives = 103/174 (59%)

Query:    11 NGAGKLEKMRLQNILMQLRKCSNHPYLF--DGAEPGPPYTTD-EHLVFNSGKMVVLDKLL 67
             + +G      L NILMQLRK   HPY++  D  +   PY      L   S K ++L  L+
Sbjct:   821 SSSGGQRTTSLNNILMQLRKTLAHPYIYSPDIEDRNLPYELAMRSLEEASCKFLILRLLV 880

Query:    68 PKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDI 127
             PKL  +  R+L+FSQ  + LDILED+  ++   Y R DG ++  +RQ  I+ FN   S++
Sbjct:   881 PKLITRGHRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSEL 940

Query:   128 FIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIKKAL 181
               F+LSTRAGG+GINLA+AD V++ D D+NP  D+QA+ R     R G  KK L
Sbjct:   941 SCFLLSTRAGGVGINLASADTVIILDPDFNPHQDMQAIARAH---RYGQKKKVL 991

 Score = 187 (70.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 34/67 (50%), Positives = 48/67 (71%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             Y R DG ++  +RQ  I+ FN   S++  F+LSTRAGG+GINLA+AD V++ D D+NP  
Sbjct:   914 YARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINLASADTVIILDPDFNPHQ 973

Query:   276 DLQAMVR 282
             D+QA+ R
Sbjct:   974 DMQAIAR 980

 Score = 40 (19.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:   182 EAKMSRYRAPFHQLRIAYGANKGKNYTEE 210
             E ++ ++ APF Q+ +  G+ K ++   +
Sbjct:   620 ERELKKW-APFLQINVLVGSEKNRSLVRD 647


>ZFIN|ZDB-GENE-091113-61 [details] [associations]
            symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
            "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=ISS]
            [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
            damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
            EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
            Bgee:E7F1C4 Uniprot:E7F1C4
        Length = 954

 Score = 275 (101.9 bits), Expect = 9.3e-28, Sum P(2) = 9.3e-28
 Identities = 64/139 (46%), Positives = 86/139 (61%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             Y  +  ++ +SGK+ +L +LL  LK +  RV++FSQ T MLDILE +      +Y RLDG
Sbjct:   771 YQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDG 830

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
              T   DR   I+ FN +  DIF+F+LSTRAGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   831 STPMSDRIGLIDQFNTD-QDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQA-- 887

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K     K+
Sbjct:   888 -EGRCHRVGQTKTVKVIKL 905

 Score = 181 (68.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 38/67 (56%), Positives = 48/67 (71%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ Y RLDG T   DR   I+ FN +  DIF+F+LSTRAGGLGINL +A+VV+L+D D N
Sbjct:   822 KHRYNRLDGSTPMSDRIGLIDQFNTD-QDIFVFLLSTRAGGLGINLTSANVVILHDIDCN 880

Query:   273 PQMDLQA 279
             P  D QA
Sbjct:   881 PYNDKQA 887

 Score = 74 (31.1 bits), Expect = 9.3e-28, Sum P(2) = 9.3e-28
 Identities = 14/21 (66%), Positives = 16/21 (76%)

Query:    17 EKMRLQNILMQLRKCSNHPYL 37
             EK  L N++MQLRK SNHP L
Sbjct:   695 EKRELTNVMMQLRKMSNHPLL 715


>WB|WBGene00007027 [details] [associations]
            symbol:ssl-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
            GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
            GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
            Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
            EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
            RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
            UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
            MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
            GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
            WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
            WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
            ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
        Length = 2395

 Score = 274 (101.5 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 54/113 (47%), Positives = 75/113 (66%)

Query:    55 FNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQ 114
             ++ GK+  L  LL +L   + R LIF+QM++MLD+L+ +    G++Y RLDG T  E RQ
Sbjct:  1185 YDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQ 1244

Query:   115 RQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
               +  FN +   +F F+LSTR+GG+G+NL  AD V+ YDSDWNP MD QA  R
Sbjct:  1245 AMMERFNADPK-VFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDR 1296

 Score = 195 (73.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
 Identities = 38/69 (55%), Positives = 46/69 (66%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDG T  E RQ  +  FN +   +F F+LSTR+GG+G+NL  AD V+ YDSDWNP
Sbjct:  1229 YQYFRLDGTTGVEQRQAMMERFNADPK-VFCFILSTRSGGVGVNLTGADTVIFYDSDWNP 1287

Query:   274 QMDLQAMVR 282
              MD QA  R
Sbjct:  1288 TMDAQAQDR 1296

 Score = 80 (33.2 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query:    19 MRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDE 51
             M + NI+MQLRKC NHP LF+      P+  ++
Sbjct:   828 MSVLNIVMQLRKCCNHPNLFEPRPVVAPFVVEK 860


>CGD|CAL0000831 [details] [associations]
            symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
            "Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
            "histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
            at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
            positioning" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043618 "regulation of transcription from RNA polymerase II
            promoter in response to stress" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
            Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
            CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
            GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
            RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
            GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
            Uniprot:Q59KI4
        Length = 1387

 Score = 317 (116.6 bits), Expect = 5.4e-27, P = 5.4e-27
 Identities = 72/165 (43%), Positives = 101/165 (61%)

Query:    15 KLEKMRLQNILMQLRKCSNHPY-LFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLPKLKAQ 73
             +L+ M+ Q  L Q  K +  P  +FD +    P  + +  +  SGK+  LD+LL  LK  
Sbjct:  1194 ELKLMKDQIPLEQYPKSNMLPMPIFDYSNIRMP--SMDRFIAESGKLAKLDELLIDLKRG 1251

Query:    74 ESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLS 133
               R+LI+ QMTRM+ I E+Y  ++ +KY RLDG T  E R+  +  +     +IFIFMLS
Sbjct:  1252 GHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREMVQAWQTN-PEIFIFMLS 1310

Query:   134 TRAGGLGINLATADVVVLYDSDWNPQMDLQAMVREAKILRRGSIK 178
             TRAGGLG+NL +AD V+ YDSDWNP +D QAM R  +I +   +K
Sbjct:  1311 TRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVK 1355

 Score = 205 (77.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 49/115 (42%), Positives = 63/115 (54%)

Query:   171 ILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEE---DRYLYCRLDGQTAHED 227
             I   G + K  E  +   R   H++ I +   +     EE      Y Y RLDG T  E 
Sbjct:  1232 IAESGKLAKLDELLIDLKRGG-HRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIES 1290

Query:   228 RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 282
             R+  +  +     +IFIFMLSTRAGGLG+NL +AD V+ YDSDWNP +D QAM R
Sbjct:  1291 RREMVQAWQTN-PEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDR 1344

 Score = 72 (30.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query:    21 LQNILMQLRKCSNHPYLFDGAEPGPPYT 48
             L N++MQ RK  NHP LF+ A+   P++
Sbjct:   958 LANLVMQFRKVCNHPDLFERADVNSPFS 985

 Score = 38 (18.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query:    16 LEKMRLQNILMQLRKCSNHPYLFDGAEPG--PPYTTDEHLVFNS 57
             L +M  QN    L +  N    FD +E     P T  E + F +
Sbjct:   610 LRRMAAQNAQNALIEVQNKAKQFDNSEESFKNPDTNGEEMNFQN 653


>UNIPROTKB|Q5FWR0 [details] [associations]
            symbol:smarcad1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
            [GO:0000729 "DNA double-strand break processing" evidence=ISS]
            [GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
            HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
            EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
            RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
            GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
            InParanoid:Q5FWR0 Uniprot:Q5FWR0
        Length = 1003

 Score = 286 (105.7 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
 Identities = 64/159 (40%), Positives = 102/159 (64%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             Y  ++ L+ +SGK  +L+KLL  +K +  RV++FSQ T MLDI+E +      +Y RLDG
Sbjct:   820 YKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDG 879

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQA-- 164
             +T   +R   I++FN +  DIFIF+LST+AGGLGINL +A++V+L+D D NP  D QA  
Sbjct:   880 KTQISERIHLIDEFNTD-MDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAED 938

Query:   165 ------MVREAKILR---RGSIKKALEAKMSRYRAPFHQ 194
                     +E K+++   +G+I++++  K+S+ +    Q
Sbjct:   939 RCHRVGQTKEVKVIKLIGKGTIEESM-LKISQQKLRLEQ 976

 Score = 178 (67.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
 Identities = 36/67 (53%), Positives = 50/67 (74%)

Query:   213 RYLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWN 272
             ++ Y RLDG+T   +R   I++FN +  DIFIF+LST+AGGLGINL +A++V+L+D D N
Sbjct:   871 QHRYVRLDGKTQISERIHLIDEFNTD-MDIFIFLLSTKAGGLGINLTSANIVILHDIDCN 929

Query:   273 PQMDLQA 279
             P  D QA
Sbjct:   930 PYNDKQA 936

 Score = 56 (24.8 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query:     3 LMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYL 37
             L K ID        +   L N++M LRK +NHP L
Sbjct:   735 LKKSIDATE-----KNSELCNVMMHLRKMANHPLL 764


>POMBASE|SPCC1235.05c [details] [associations]
            symbol:fft2 "fun thirty related protein Fft2
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
            "nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
            [GO:0051276 "chromosome organization" evidence=ISS]
            InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
            GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
            GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
            ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
            GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
            Uniprot:O74842
        Length = 1284

 Score = 290 (107.1 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
 Identities = 74/199 (37%), Positives = 113/199 (56%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             YT  +    +SGK+ VL +LLPK+K + SR+L+FSQ T+MLDILE         Y RLDG
Sbjct:   913 YTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDG 972

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
              T  E RQ  I+ F+ E  D+ +F+LST+AGG GINLA A+VV+LYD  +NP  DLQA  
Sbjct:   973 STQVEVRQDIIDQFHKE-EDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAED 1031

Query:   167 REAKI--LRRGSIKKAL-EAKMSRYRAPFHQLRIAYG---ANKGKNYTEEEDRYLYCRLD 220
             R  ++  +R  ++ + + +  +  Y       ++A     ++ GK+  E  +R +   LD
Sbjct:  1032 RAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSLSSDGKDREEIGERLVQDMLD 1091

Query:   221 GQTAHEDRQRQINDFNMEG 239
              +    + + +I     +G
Sbjct:  1092 EENNGNNTKPEITGNESDG 1110

 Score = 174 (66.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
 Identities = 37/64 (57%), Positives = 46/64 (71%)

Query:   216 YCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQM 275
             Y RLDG T  E RQ  I+ F+ E  D+ +F+LST+AGG GINLA A+VV+LYD  +NP  
Sbjct:   967 YVRLDGSTQVEVRQDIIDQFHKE-EDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFD 1025

Query:   276 DLQA 279
             DLQA
Sbjct:  1026 DLQA 1029

 Score = 55 (24.4 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query:    23 NILMQLRKCSNHPYLF 38
             ++LMQLRK +NH  LF
Sbjct:   843 HVLMQLRKAANHALLF 858


>CGD|CAL0001763 [details] [associations]
            symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
            "Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
            activity" evidence=IEA] [GO:0043486 "histone exchange"
            evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
            Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
            EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
            RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
            PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
            KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
        Length = 1641

 Score = 284 (105.0 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
 Identities = 60/115 (52%), Positives = 76/115 (66%)

Query:    53 LVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDGQTAHED 112
             L ++ GK+  L  LL +L +Q  R LIF+QMT++LDILE +    G++Y RLDG T  ED
Sbjct:  1361 LQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIED 1420

Query:   113 RQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMVR 167
             RQ     FN +   I +F+LSTR+GGLGINL  AD V+ YDSDWNP MD Q   R
Sbjct:  1421 RQLLTEKFNRDPK-IPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDR 1474

 Score = 191 (72.3 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
 Identities = 40/69 (57%), Positives = 45/69 (65%)

Query:   214 YLYCRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNP 273
             Y Y RLDG T  EDRQ     FN +   I +F+LSTR+GGLGINL  AD V+ YDSDWNP
Sbjct:  1407 YRYMRLDGATKIEDRQLLTEKFNRDPK-IPVFILSTRSGGLGINLTGADTVIFYDSDWNP 1465

Query:   274 QMDLQAMVR 282
              MD Q   R
Sbjct:  1466 AMDKQCQDR 1474

 Score = 61 (26.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
 Identities = 12/17 (70%), Positives = 13/17 (76%)

Query:    23 NILMQLRKCSNHPYLFD 39
             N LMQLRK  NHP LF+
Sbjct:  1124 NCLMQLRKVCNHPDLFE 1140

 Score = 51 (23.0 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
 Identities = 26/90 (28%), Positives = 43/90 (47%)

Query:     1 MVLMKDIDVVNGAGKLEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVFNSGKM 60
             ++ +KD +V+  A KL + +LQN L    K    P + +   P   +T DE+    S + 
Sbjct:   315 IIQLKD-EVI-AAPKLTE-KLQNFLNNDFKT---PIIDESNVPDYNFTRDEYNTIMSQQE 368

Query:    61 VVLDKLLPKLKAQESRVLIFSQMTRMLDIL 90
              +L KL  K+  + S  L   ++ R   IL
Sbjct:   369 KLLRKLYHKVNIENSLELNGDKIERRKVIL 398


>MGI|MGI:95453 [details] [associations]
            symbol:Smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
            of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0000729 "DNA double-strand break
            processing" evidence=ISO] [GO:0000792 "heterochromatin"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
            "response to DNA damage stimulus" evidence=IEA] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0035861 "site of double-strand break"
            evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
            [GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
            "histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
            deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
            eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
            KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
            CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
            EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
            IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
            UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
            PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
            Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
            UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
            NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
            GermOnline:ENSMUSG00000029920 Uniprot:Q04692
        Length = 1021

 Score = 276 (102.2 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
 Identities = 64/139 (46%), Positives = 87/139 (62%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             Y  D  L+ +SGK   L  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   838 YQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 897

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   898 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 954

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   955 -EDRCHRVGQTKEVLVIKL 972

 Score = 183 (69.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 48/121 (39%), Positives = 68/121 (56%)

Query:   159 QMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
             Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL  R
Sbjct:   839 QLDMDLILDSGKFRALGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL--R 894

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             LDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D Q
Sbjct:   895 LDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ 953

Query:   279 A 279
             A
Sbjct:   954 A 954

 Score = 62 (26.9 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query:    16 LEK-MRLQNILMQLRKCSNHPYL 37
             LEK   + N++MQLRK +NHP L
Sbjct:   760 LEKNTEMCNVMMQLRKMANHPLL 782


>RGD|1309640 [details] [associations]
            symbol:Smarcad1 "SWI/SNF-related, matrix-associated
            actin-dependent regulator of chromatin, subfamily a, containing
            DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
            "regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
            "DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
            "heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
            evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
            evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
            evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
            evidence=IEA;ISO] [GO:0051304 "chromosome separation"
            evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
            evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
            evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
            SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
            GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
            OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
            RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
            Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
            UCSC:RGD:1309640 Uniprot:D3Z9Z9
        Length = 1024

 Score = 276 (102.2 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
 Identities = 64/139 (46%), Positives = 87/139 (62%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             Y  D  L+ +SGK   L  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   841 YQLDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 900

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   901 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 957

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   958 -EDRCHRVGQTKEVLVIKL 975

 Score = 183 (69.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 48/121 (39%), Positives = 68/121 (56%)

Query:   159 QMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLYCR 218
             Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL  R
Sbjct:   842 QLDMDLILDSGKFRTLGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL--R 897

Query:   219 LDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQ 278
             LDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D Q
Sbjct:   898 LDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ 956

Query:   279 A 279
             A
Sbjct:   957 A 957

 Score = 62 (26.9 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query:    16 LEK-MRLQNILMQLRKCSNHPYL 37
             LEK   + N++MQLRK +NHP L
Sbjct:   763 LEKNTEMCNVMMQLRKMANHPLL 785


>UNIPROTKB|Q9H4L7 [details] [associations]
            symbol:SMARCAD1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0009117 "nucleotide metabolic process" evidence=NAS]
            [GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
            "nuclear matrix" evidence=NAS] [GO:0051260 "protein
            homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
            recombination" evidence=IEP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
            modification" evidence=NAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
            "DNA double-strand break processing" evidence=IMP] [GO:0043044
            "ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
            "site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
            replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
            [GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
            "histone H4 deacetylation" evidence=IMP] [GO:0000792
            "heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
            InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
            Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
            GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
            GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
            HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
            OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
            EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
            EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
            RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
            RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
            SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
            PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
            Ensembl:ENST00000359052 Ensembl:ENST00000457823
            Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
            UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
            HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
            neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
            HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
            ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
            Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
        Length = 1026

 Score = 276 (102.2 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
 Identities = 64/139 (46%), Positives = 88/139 (63%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             +  D  L+ +SGK  VL  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   843 FQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 902

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   903 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 959

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   960 -EDRCHRVGQTKEVLVIKL 977

 Score = 183 (69.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
 Identities = 49/123 (39%), Positives = 69/123 (56%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLY 216
             N Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL 
Sbjct:   842 NFQLDMDLILDSGKFRVLGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL- 898

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
              RLDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D
Sbjct:   899 -RLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956

Query:   277 LQA 279
              QA
Sbjct:   957 KQA 959

 Score = 62 (26.9 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query:    16 LEK-MRLQNILMQLRKCSNHPYL 37
             LEK   + N++MQLRK +NHP L
Sbjct:   765 LEKNTEMCNVMMQLRKMANHPLL 787


>UNIPROTKB|E2RG62 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
            [GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
            "nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035861 "site of
            double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000018 "regulation of DNA recombination" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
            GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
            EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
        Length = 1026

 Score = 276 (102.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 64/139 (46%), Positives = 88/139 (63%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             +  D  L+ +SGK  VL  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   843 FQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 902

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   903 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 959

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   960 -EDRCHRVGQTKEVLVIKL 977

 Score = 183 (69.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
 Identities = 49/123 (39%), Positives = 69/123 (56%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLY 216
             N Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL 
Sbjct:   842 NFQLDMDLILDSGKFRVLGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL- 898

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
              RLDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D
Sbjct:   899 -RLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956

Query:   277 LQA 279
              QA
Sbjct:   957 KQA 959

 Score = 60 (26.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:    16 LEKM-RLQNILMQLRKCSNHPYL 37
             +EK   + N++MQLRK +NHP L
Sbjct:   765 IEKSTEMCNVMMQLRKMANHPLL 787


>UNIPROTKB|J9NX47 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
            EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
            Uniprot:J9NX47
        Length = 1026

 Score = 276 (102.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 64/139 (46%), Positives = 88/139 (63%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             +  D  L+ +SGK  VL  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   843 FQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 902

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   903 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 959

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   960 -EDRCHRVGQTKEVLVIKL 977

 Score = 183 (69.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
 Identities = 49/123 (39%), Positives = 69/123 (56%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLY 216
             N Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL 
Sbjct:   842 NFQLDMDLILDSGKFRVLGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL- 898

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
              RLDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D
Sbjct:   899 -RLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956

Query:   277 LQA 279
              QA
Sbjct:   957 KQA 959

 Score = 60 (26.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:    16 LEKM-RLQNILMQLRKCSNHPYL 37
             +EK   + N++MQLRK +NHP L
Sbjct:   765 IEKSTEMCNVMMQLRKMANHPLL 787


>UNIPROTKB|J9PA79 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
            OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
            Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
        Length = 1026

 Score = 276 (102.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 64/139 (46%), Positives = 88/139 (63%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             +  D  L+ +SGK  VL  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   843 FQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 902

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   903 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 959

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   960 -EDRCHRVGQTKEVLVIKL 977

 Score = 183 (69.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
 Identities = 49/123 (39%), Positives = 69/123 (56%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLY 216
             N Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL 
Sbjct:   842 NFQLDMDLILDSGKFRVLGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL- 898

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
              RLDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D
Sbjct:   899 -RLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 956

Query:   277 LQA 279
              QA
Sbjct:   957 KQA 959

 Score = 60 (26.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:    16 LEKM-RLQNILMQLRKCSNHPYL 37
             +EK   + N++MQLRK +NHP L
Sbjct:   765 IEKSTEMCNVMMQLRKMANHPLL 787


>UNIPROTKB|E1B7X9 [details] [associations]
            symbol:SMARCAD1 "SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A containing
            DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
            double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
            break processing" evidence=ISS] [GO:0070933 "histone H4
            deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
            "heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
            evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
            DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
            InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
            GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
            GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
            GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
            UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
            Uniprot:E1B7X9
        Length = 1028

 Score = 276 (102.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 64/139 (46%), Positives = 88/139 (63%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             +  D  L+ +SGK  VL  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   845 FQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 904

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   905 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 961

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   962 -EDRCHRVGQTKEVLVIKL 979

 Score = 183 (69.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
 Identities = 49/123 (39%), Positives = 69/123 (56%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLY 216
             N Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL 
Sbjct:   844 NFQLDMDLILDSGKFRVLGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL- 900

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
              RLDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D
Sbjct:   901 -RLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 958

Query:   277 LQA 279
              QA
Sbjct:   959 KQA 961

 Score = 60 (26.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:    16 LEK-MRLQNILMQLRKCSNHPYL 37
             +EK   + N++MQLRK +NHP L
Sbjct:   767 MEKNTEMCNVMMQLRKMANHPLL 789


>UNIPROTKB|F1RWW3 [details] [associations]
            symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
            "chromosome separation" evidence=IEA] [GO:0043596 "nuclear
            replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
            chromatin remodeling" evidence=IEA] [GO:0035861 "site of
            double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000018 "regulation of DNA recombination" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
            InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
            PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
            GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
            EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
        Length = 1029

 Score = 276 (102.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 64/139 (46%), Positives = 88/139 (63%)

Query:    47 YTTDEHLVFNSGKMVVLDKLLPKLKAQESRVLIFSQMTRMLDILEDYCYWRGFKYCRLDG 106
             +  D  L+ +SGK  VL  +L +LK +  RV++FSQ T MLDILE        +Y RLDG
Sbjct:   846 FQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG 905

Query:   107 QTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMDLQAMV 166
             +T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D QA  
Sbjct:   906 KTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA-- 962

Query:   167 REAKILRRGSIKKALEAKM 185
              E +  R G  K+ L  K+
Sbjct:   963 -EDRCHRVGQTKEVLVIKL 980

 Score = 183 (69.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
 Identities = 49/123 (39%), Positives = 69/123 (56%)

Query:   157 NPQMDLQAMVREAKILRRGSIKKALEAKMSRYRAPFHQLRIAYGANKGKNYTEEEDRYLY 216
             N Q+D+  ++   K    G I   L+ K  R    F Q  +     +       + RYL 
Sbjct:   845 NFQLDMDLILDSGKFRVLGCILSELKQKGDRV-VLFSQFTMMLDILEVL-LKHHQHRYL- 901

Query:   217 CRLDGQTAHEDRQRQINDFNMEGSDIFIFMLSTRAGGLGINLATADVVVLYDSDWNPQMD 276
              RLDG+T   +R   I++FN +  DIF+F+LST+AGGLGINL +A+VV+L+D D NP  D
Sbjct:   902 -RLDGKTQISERIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYND 959

Query:   277 LQA 279
              QA
Sbjct:   960 KQA 962

 Score = 60 (26.2 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:    16 LEK-MRLQNILMQLRKCSNHPYL 37
             +EK   + N++MQLRK +NHP L
Sbjct:   768 MEKNTEMCNVMMQLRKMANHPLL 790

WARNING:  HSPs involving 239 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      288       288   0.00087  115 3  11 22  0.46    33
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  489
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  196 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.02u 0.11s 24.13t   Elapsed:  00:00:02
  Total cpu time:  24.08u 0.12s 24.20t   Elapsed:  00:00:02
  Start:  Thu Aug 15 11:52:59 2013   End:  Thu Aug 15 11:53:01 2013
WARNINGS ISSUED:  2

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