RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10686
         (147 letters)



>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket
           (Vespula vulgaris), Ves v 5 [TaxId: 7454]}
          Length = 209

 Score = 84.2 bits (207), Expect = 1e-21
 Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 8/124 (6%)

Query: 5   QLSALALDWANQ-LLEADKFSHRPDNKFGENIFFYTSSFYVDDKEAIKKAVTAWYNEIED 63
           +L+ +A  WANQ     D        + G+N+    S+    D     K V  W +E++D
Sbjct: 87  ELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVALTGSTAAKYDD--PVKLVKMWEDEVKD 144

Query: 64  YREYFDLEPPLEALTTGNPTGHFTQVVWNGTTEVGLGLSRNASSDFHKVIVVANYAPPGN 123
           Y                  TGH+TQ+VW  T EVG G  +     +HK  +V NY P GN
Sbjct: 145 YNPKKKFSGN-----DFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGN 199

Query: 124 ILGR 127
               
Sbjct: 200 FKNE 203


>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein
           (SteCRISP) {Chinese green tree viper (Trimeresurus
           stejnegeri) [TaxId: 39682]}
          Length = 164

 Score = 73.4 bits (179), Expect = 7e-18
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 16/131 (12%)

Query: 5   QLSALALDWANQLLEADKFSHRPDNKF---GENIFFYTSSFYVDDKEAIKKAVTAWYNEI 61
           + +  A  WA + +E+         +    GENI+         D       + AW++E 
Sbjct: 44  EAADNAERWAYRCIESHSSYESRVIEGIKCGENIYMSPYPMKWTD------IIHAWHDEY 97

Query: 62  EDYREYFDLEPPLEALTTGNPTGHFTQVVWNGTTEVGLGLSRNASSDFHKVIVVANYAPP 121
           +D++     +PP         TGH+TQ+VW  +  +G   +   SS  +    V  Y P 
Sbjct: 98  KDFKYGVGADPP------NAVTGHYTQIVWYKSYRIGCAAAYCPSSP-YSYFFVCQYCPA 150

Query: 122 GNILGRFKENV 132
           GN +G+     
Sbjct: 151 GNFIGKTATPY 161


>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 149

 Score = 64.9 bits (157), Expect = 8e-15
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 16/133 (12%)

Query: 5   QLSALALDWANQLLEADKFSHRPDNKFGENIFFYTSSFYVDDKEAIKKAVTAWYNEIEDY 64
            L+  A  ++  L       H P++  G+       + Y    +  K+    WY+EI++Y
Sbjct: 31  NLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY---DQTGKEVADRWYSEIKNY 87

Query: 65  REYFDLEPPLEALTTGNPTGHFTQVVWNGTTEVGLGLSRNASSDFHKVIVVANYAPPGNI 124
                           + TGHFT +VW  T ++G+G +  +        VVA Y P GN+
Sbjct: 88  NFQQP--------GFTSGTGHFTAMVWKNTKKMGVGKASASD---GSSFVVARYFPAGNV 136

Query: 125 LGR--FKENVPMP 135
           +    F+ENV  P
Sbjct: 137 VNEGFFEENVLPP 149


>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato
           (Lycopersicon esculentum), P14a [TaxId: 4081]}
          Length = 135

 Score = 57.9 bits (139), Expect = 3e-12
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 5   QLSALALDWANQLLEADKFSHRPDNKFGENIFFYTSSFYVDDKEAIKKAVTAWYNEIEDY 64
            L++ A ++AN         H      G              + A++  V+   +     
Sbjct: 28  NLASRAQNYANSRAGDCNLIH-----SGAGENLAKGGGDFTGRAAVQLWVSERPSYNYAT 82

Query: 65  REYFDLEPPLEALTTGNPTGHFTQVVWNGTTEVGLGLSRNASSDFHKVIVVANYAPPGNI 124
            +             G    H+TQVVW  +  +G G +R  +       +  NY P GN 
Sbjct: 83  NQC----------VGGKKCRHYTQVVWRNSVRLGCGRARCNNG---WWFISCNYDPVGNW 129

Query: 125 LGRF 128
           +G+ 
Sbjct: 130 IGQR 133


>d1kkoa2 d.54.1.1 (A:1-160) beta-Methylaspartase {Citrobacter
          amalonaticus [TaxId: 35703]}
          Length = 160

 Score = 25.9 bits (57), Expect = 1.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 40 SSFYVDDKEAIKKAVTA 56
          SSFY DD++AIK     
Sbjct: 13 SSFYFDDQQAIKNGAGH 29


>d1kcza2 d.54.1.1 (A:1-160) beta-Methylaspartase {Clostridium
          tetanomorphum [TaxId: 1553]}
          Length = 160

 Score = 25.9 bits (57), Expect = 1.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 40 SSFYVDDKEAIKKAVTA 56
          + FY DD+ AIKK    
Sbjct: 13 TGFYFDDQRAIKKGAGH 29


>d1adta1 a.54.1.1 (A:176-265) Domain of early E2A DNA-binding
          protein, ADDBP {Human adenovirus type 5 [TaxId: 28285]}
          Length = 90

 Score = 23.2 bits (50), Expect = 9.1
 Identities = 9/51 (17%), Positives = 15/51 (29%), Gaps = 9/51 (17%)

Query: 10 ALDWANQLLEADKFSHRPDNKFGENIFFYTSSFYVDDKEAIKKAVTAWYNE 60
           ++ A  L++     +     F             D  EA+      W NE
Sbjct: 9  GMEAARALMDKYHVDNDLKANF---------KLLPDQVEALAAVCKTWLNE 50


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0461    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 593,568
Number of extensions: 27175
Number of successful extensions: 92
Number of sequences better than 10.0: 1
Number of HSP's gapped: 88
Number of HSP's successfully gapped: 12
Length of query: 147
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 70
Effective length of database: 1,350,386
Effective search space: 94527020
Effective search space used: 94527020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.3 bits)