RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10688
         (169 letters)



>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket
           (Vespula vulgaris), Ves v 5 [TaxId: 7454]}
          Length = 209

 Score = 91.1 bits (225), Expect = 5e-24
 Identities = 46/161 (28%), Positives = 64/161 (39%), Gaps = 25/161 (15%)

Query: 7   LKYHNEKRELH-----------LLPP------LSYNKQLSALALDWANQ-LLEADKFSHR 48
           LK HN+ R+               PP      L +N +L+ +A  WANQ     D     
Sbjct: 50  LKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDV 109

Query: 49  PDNKFGENIFFYTSSFYVDDKEAIKKAVTAWYNEIEDYREYFDLEPPLEALTTGNPTGHF 108
              + G+N+    S+    D     K V  W +E++DY                  TGH+
Sbjct: 110 AKYQVGQNVALTGSTAAKYDD--PVKLVKMWEDEVKDYNPKKKFSGN-----DFLKTGHY 162

Query: 109 TQVVWNGTTEVGLGLSRNASSDFHKVIVVANYAPPGNILGR 149
           TQ+VW  T EVG G  +     +HK  +V NY P GN    
Sbjct: 163 TQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNE 203


>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 149

 Score = 88.0 bits (217), Expect = 2e-23
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 7   LKYHNEKRELHLLPPLSYNKQLSALALDWANQLLEADKFSHRPDNKFGENIFFYTSSFYV 66
           LK HNE R+ H +PPL   K L+  A  ++  L       H P++  G+       + Y 
Sbjct: 11  LKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY- 69

Query: 67  DDKEAIKKAVTAWYNEIEDYREYFDLEPPLEALTTGNPTGHFTQVVWNGTTEVGLGLSRN 126
              +  K+    WY+EI++Y                + TGHFT +VW  T ++G+G +  
Sbjct: 70  --DQTGKEVADRWYSEIKNYNFQQP--------GFTSGTGHFTAMVWKNTKKMGVGKASA 119

Query: 127 ASSDFHKVIVVANYAPPGNILGR--FKENVPMP 157
           +        VVA Y P GN++    F+ENV  P
Sbjct: 120 SD---GSSFVVARYFPAGNVVNEGFFEENVLPP 149


>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein
           (SteCRISP) {Chinese green tree viper (Trimeresurus
           stejnegeri) [TaxId: 39682]}
          Length = 164

 Score = 87.6 bits (216), Expect = 4e-23
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 21/156 (13%)

Query: 7   LKYHNEKRELH-----LLPPLSYNKQLSALALDWANQLLEADKFSHRPDNKF---GENIF 58
           +  HN  R         +  + +  + +  A  WA + +E+         +    GENI+
Sbjct: 19  VDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIKCGENIY 78

Query: 59  FYTSSFYVDDKEAIKKAVTAWYNEIEDYREYFDLEPPLEALTTGNPTGHFTQVVWNGTTE 118
                    D       + AW++E +D++     +PP         TGH+TQ+VW  +  
Sbjct: 79  MSPYPMKWTD------IIHAWHDEYKDFKYGVGADPP------NAVTGHYTQIVWYKSYR 126

Query: 119 VGLGLSRNASSDFHKVIVVANYAPPGNILGRFKENV 154
           +G   +   SS  +    V  Y P GN +G+     
Sbjct: 127 IGCAAAYCPSSP-YSYFFVCQYCPAGNFIGKTATPY 161


>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato
           (Lycopersicon esculentum), P14a [TaxId: 4081]}
          Length = 135

 Score = 80.3 bits (197), Expect = 2e-20
 Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 18/144 (12%)

Query: 7   LKYHNEKRELHLLPPLSYNKQLSALALDWANQLLEADKFSHRPDNKFGENIFFYTSSFYV 66
           L  HN+ R    + P+S++  L++ A ++AN         H      G            
Sbjct: 8   LAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIH-----SGAGENLAKGGGDF 62

Query: 67  DDKEAIKKAVTAWYNEIEDYREYFDLEPPLEALTTGNPTGHFTQVVWNGTTEVGLGLSRN 126
             + A++  V+   +      +             G    H+TQVVW  +  +G G +R 
Sbjct: 63  TGRAAVQLWVSERPSYNYATNQC----------VGGKKCRHYTQVVWRNSVRLGCGRARC 112

Query: 127 ASSDFHKVIVVANYAPPGNILGRF 150
            +       +  NY P GN +G+ 
Sbjct: 113 NNG---WWFISCNYDPVGNWIGQR 133


>d1kkoa2 d.54.1.1 (A:1-160) beta-Methylaspartase {Citrobacter
          amalonaticus [TaxId: 35703]}
          Length = 160

 Score = 26.3 bits (58), Expect = 1.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 62 SSFYVDDKEAIKKAVTA 78
          SSFY DD++AIK     
Sbjct: 13 SSFYFDDQQAIKNGAGH 29


>d1kcza2 d.54.1.1 (A:1-160) beta-Methylaspartase {Clostridium
          tetanomorphum [TaxId: 1553]}
          Length = 160

 Score = 26.3 bits (58), Expect = 1.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 62 SSFYVDDKEAIKKAVTA 78
          + FY DD+ AIKK    
Sbjct: 13 TGFYFDDQRAIKKGAGH 29


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0432    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 682,522
Number of extensions: 31689
Number of successful extensions: 102
Number of sequences better than 10.0: 1
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 10
Length of query: 169
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 90
Effective length of database: 1,322,926
Effective search space: 119063340
Effective search space used: 119063340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.8 bits)