BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10689
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VCR7|CTNS_DROME Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2
Length = 397
Score = 224 bits (571), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 158/248 (63%), Gaps = 1/248 (0%)
Query: 18 AKRSNHLNQTLNGYNPGNA-IVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYF 76
A + + + + G GN +V +++ KDV V V V K S I GW+YF
Sbjct: 81 AGSTRNQSVVITGLKAGNVKVVADSDDANKEIVKDVFVRVTVAKSRALIYTSIIFGWVYF 140
Query: 77 VSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNP 136
V+W S + Q+ N++RKSV GLNFD+L LN++G +LY ++N LYF +Q EY +R P
Sbjct: 141 VAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFNCGLYFIEDLQNEYEVRYP 200
Query: 137 HSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLA 196
NP+ LNDVVFS H T T+ QC+ Y+R QR+S A + ++AV V +S LA
Sbjct: 201 LGVNPVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAIFAVVVVVSAGLA 260
Query: 197 LVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQ 256
IHWLDF+ C+ +KLTIT+IKY PQA MN++RKST GWSIGN+LLDF GG S+LQ
Sbjct: 261 GGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSMLQ 320
Query: 257 MLILAYNF 264
M++ A+N+
Sbjct: 321 MILNAHNY 328
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 278 HLSLIKTKFTLIFW---AYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWN 334
+ S +K T+I + A MN++RKST GWSIGN+LLDF GG S+LQM++ A+N+DDW
Sbjct: 273 YCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSMLQMILNAHNYDDWV 332
Query: 335 SLLTDTTKLGLAAFTLMFDVLFLVQHYILY 364
S+ D TK GL F+++FDV F++QHY+ Y
Sbjct: 333 SIFGDPTKFGLGLFSVLFDVFFMLQHYVFY 362
>sp|Q09500|CTNS_CAEEL Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=3 SV=2
Length = 404
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 139/241 (57%)
Query: 50 KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMI 109
+D + V + H L I+GW YF +W S + Q+ +N++RKSV+GLNFD+L LN++
Sbjct: 111 EDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSLNLV 170
Query: 110 GHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYER 169
G Y ++N ++Y++ V+ EY + NP S P+ LNDVVF+ H L T+ QC YER
Sbjct: 171 GFCAYAIFNLLMYYNSHVKNEYNIVNPRSPPPVLLNDVVFAVHAFLACFITILQCLFYER 230
Query: 170 GNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMN 229
NQ +S L V + F S ++ KI L F+ + IK+ +T KY PQAY N
Sbjct: 231 DNQSVSSKCIALMIVLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFN 290
Query: 230 FKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLI 289
+ RKSTVGWSIGN++LDF GG +LQM++ A N + + L + F +I
Sbjct: 291 YTRKSTVGWSIGNIMLDFTGGTLDILQMILQAVNVNDWSAFYANPVKFGLGFVSIFFDII 350
Query: 290 F 290
F
Sbjct: 351 F 351
>sp|A7MB63|CTNS_BOVIN Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1
Length = 367
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 134/199 (67%)
Query: 65 TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFS 124
+ ++ +IGWIYFV+W S + QV+ NW+RKSV+GL+FD++ LN++G Y V+N L++
Sbjct: 124 SIINQVIGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVLNLMGFVAYSVFNIGLFWV 183
Query: 125 YPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTV 184
++E++ L+ P+ NP+ NDV FS H +TL + QC YERG+QR+S A +
Sbjct: 184 PSIKEQFLLKYPNGVNPVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVL 243
Query: 185 YAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
++ ++ +A V WL F+ + IKL +TL+KY PQAYMNF KST GWSIGNVL
Sbjct: 244 SWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVL 303
Query: 245 LDFAGGLFSLLQMLILAYN 263
LDF GG FSLLQM + +YN
Sbjct: 304 LDFTGGSFSLLQMFLQSYN 322
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 280 SLIKTKFTLIFW---AYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSL 336
S IK TL+ + AYMNF KST GWSIGNVLLDF GG FSLLQM + +YN D W +
Sbjct: 270 SYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLI 329
Query: 337 LTDTTKLGLAAFTLMFDVLFLVQHYILY 364
D TK GL F+++FDV+F +QH+ LY
Sbjct: 330 FGDPTKFGLGIFSIIFDVVFFIQHFCLY 357
>sp|O60931|CTNS_HUMAN Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2
Length = 367
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 136/206 (66%)
Query: 58 VEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVY 117
V + + ++ +IGWIYFV+W S + QV++NW+RKSVIGL+FD++ LN+ G Y V+
Sbjct: 117 VIRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVF 176
Query: 118 NFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKG 177
N L + ++E++ L+ P+ NP+ NDV FS H ++TL + QC YERG QR+S
Sbjct: 177 NIGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWP 236
Query: 178 AKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVG 237
A + ++ F++ +A V WL F+ + IKL +TL+KY PQAYMNF KST G
Sbjct: 237 AIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEG 296
Query: 238 WSIGNVLLDFAGGLFSLLQMLILAYN 263
WSIGNVLLDF GG FSLLQM + +YN
Sbjct: 297 WSIGNVLLDFTGGSFSLLQMFLQSYN 322
>sp|P57757|CTNS_MOUSE Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1
Length = 367
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 131/199 (65%)
Query: 65 TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFS 124
+ ++ +IGWIYF++W S + QV+ NW+RKSVIGL+FD+L LN+ G Y V+N L +
Sbjct: 124 SIINQVIGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNIGLLWV 183
Query: 125 YPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTV 184
+QEE+ L+ P+ NP+ ND FS H +TL + QC YERGNQR+S + +
Sbjct: 184 PYIQEEFLLKYPNGVNPVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVL 243
Query: 185 YAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
++V ++ +A V WL F+ + IKL ITLIKY PQAYMNF KST GWSIG VL
Sbjct: 244 AWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVL 303
Query: 245 LDFAGGLFSLLQMLILAYN 263
LDF GG FSLLQM + +YN
Sbjct: 304 LDFTGGSFSLLQMFLQSYN 322
>sp|A8WN56|CTNS_CAEBR Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1
Length = 403
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 153/273 (56%), Gaps = 7/273 (2%)
Query: 25 NQTLNGYNPGNAIVLIQLQPYEQLEK-------DVVVHVDVEKGHHWTTLSTIIGWIYFV 77
N T++G P +L L E+ D + V + H L I+GW YF
Sbjct: 78 NVTVSGERPVAGEILEALNCTTDGEEVCSLDLLDAYSRITVIRSHWLAILIQIVGWTYFA 137
Query: 78 SWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPH 137
+W S + Q+ +N++RKSV+GLNFD+L LN++G Y ++N ++Y++ V+ Y + NP
Sbjct: 138 AWSVSFYPQMYLNFKRKSVVGLNFDFLSLNLVGFGAYAMFNLLMYYNSHVKNIYSMENPR 197
Query: 138 SANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLAL 197
S P+ LNDVVF+ H L T+ QC YER QR+S +L + F+S + +
Sbjct: 198 SPPPVLLNDVVFAVHAFLACFVTILQCIFYERDQQRISTKCIILIIGLVSFGFVSVVVTV 257
Query: 198 VHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQM 257
++KI LDF+ + IK+ +T KY PQAY N++RKSTVGWSIGN+LLDF GG +LQM
Sbjct: 258 LNKITILDFVVSLSYIKMAVTCCKYFPQAYFNYQRKSTVGWSIGNILLDFTGGSLDILQM 317
Query: 258 LILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
++ A N + + L + F +IF
Sbjct: 318 VLQAINVNDWSAFYANPVKFGLGFVSIFFDIIF 350
>sp|Q54WT7|CTNS_DICDI Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1
Length = 284
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 135/219 (61%), Gaps = 1/219 (0%)
Query: 72 GWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEY 131
GWIYF W S + QV++N+++K+VIGL+FD+L N+ G++ Y V+N VLYF V+ EY
Sbjct: 12 GWIYFACWSLSFYPQVILNFRKKNVIGLSFDFLLFNITGYACYSVFNSVLYFDKLVKNEY 71
Query: 132 YLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFL 191
Y + P+Q +D+ F+ H ++T T+ QC+ Y+RGNQ+ SK + T+ V + +
Sbjct: 72 YDKYGPPI-PVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIV 130
Query: 192 SGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGL 251
L + WL IN + +KL IT IKY PQAY+NFK KST GWS+ NVLLDF+GG+
Sbjct: 131 MTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHNVLLDFSGGV 190
Query: 252 FSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
SLLQM + + G ++ LSL F ++F
Sbjct: 191 LSLLQMFLDVADSGNWNIFTGDPVKLGLSLFSIAFDILF 229
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 292 AYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLM 351
AY+NFK KST GWS+ NVLLDF+GG+ SLLQM + + +WN D KLGL+ F++
Sbjct: 165 AYLNFKNKSTSGWSVHNVLLDFSGGVLSLLQMFLDVADSGNWNIFTGDPVKLGLSLFSIA 224
Query: 352 FDVLFLVQHYILYTD 366
FD+LF++QHYILY +
Sbjct: 225 FDILFIIQHYILYRN 239
>sp|P57758|CTNS_ARATH Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1
Length = 270
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 70 IIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQE 129
I+GWI F SW S + Q+++N++R+SV+GLNFD++ LN+ HS Y +YN LYFS +Q+
Sbjct: 15 IVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMIYNVCLYFSPVIQK 74
Query: 130 EYY-LRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVW 188
+Y+ P+ NDV FS H ++T T++Q + YERG Q++S+ A + V VW
Sbjct: 75 QYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLA--IGIVVVVW 132
Query: 189 VFLSGFLALVHKIH-WLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDF 247
F + + H WL I+ I++ +T +KY PQA MNF RKSTVGWSIGN+LLDF
Sbjct: 133 GFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDF 192
Query: 248 AGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
GGL + LQM+I + + K + LSLI F ++F
Sbjct: 193 TGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILF 235
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 292 AYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLM 351
A MNF RKSTVGWSIGN+LLDF GGL + LQM+I + + + W + + K L+ ++
Sbjct: 171 AKMNFTRKSTVGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIF 230
Query: 352 FDVLFLVQHYILYTD 366
FD+LF+ QHY+LY +
Sbjct: 231 FDILFMFQHYVLYPE 245
>sp|P17261|ERS1_YEAST Cystine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=ERS1 PE=1 SV=1
Length = 260
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 23/243 (9%)
Query: 66 TLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSY 125
+L I+G +Y SW S + ++ NW+ KS ++ D++ LN G+S + F+ + +
Sbjct: 3 SLDDILGIVYVTSWSISMYPPIITNWRHKSASAISMDFVMLNTAGYSYLVISIFLQLYCW 62
Query: 126 PVQ-EEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYER-------GNQRLSK- 176
+ +E L P + D + H L+ + + Q R G+++++
Sbjct: 63 KMTGDESDLGRPK----LTQFDFWYCLHGCLMNVVLLTQVVAGARIWRFPGKGHRKMNPW 118
Query: 177 ------GAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNF 230
+ ++++ V S + H L + N L+K++++LIKY PQ N
Sbjct: 119 YLRILLASLAIFSLLTVQFMYSNYWYDWHNSRTLAYCNNLFLLKISMSLIKYIPQVTHNS 178
Query: 231 KRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSY---WDQIHLSLIKTKFT 287
RKS + I V LD GG+ SLLQ LI + + +LD++ + ++ LS++ F
Sbjct: 179 TRKSMDCFPIQGVFLDVTGGIASLLQ-LIWQLSNDQGFSLDTFVTNFGKVGLSMVTLIFN 237
Query: 288 LIF 290
IF
Sbjct: 238 FIF 240
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 295 NFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDW--NSLLTDTTKLGLAAFTLMF 352
N RKS + I V LD GG+ SLLQ++ N + ++ +T+ K+GL+ TL+F
Sbjct: 177 NSTRKSMDCFPIQGVFLDVTGGIASLLQLIWQLSNDQGFSLDTFVTNFGKVGLSMVTLIF 236
Query: 353 DVLFLVQHYILYTDHDD 369
+ +F++Q ++ + D
Sbjct: 237 NFIFIMQWFVYRSRGHD 253
>sp|Q9PR05|Y139_UREPA Uncharacterized protein UU139 OS=Ureaplasma parvum serovar 3
(strain ATCC 700970) GN=UU139 PE=4 SV=1
Length = 236
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 23 HLNQTLNGYNPGNAIVLIQLQPYE-QLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGA 81
++N+ N YN N+++L L Y + ++ + H++ WT +++ WIYF+++
Sbjct: 83 NINENKNIYNERNSLILFDLVNYIIEKNQNSIRHINF-----WTIQMSVVNWIYFITYNF 137
Query: 82 SAHCQVLVNWQR 93
+ + NW++
Sbjct: 138 NNSYLIDPNWKK 149
>sp|P25565|YCA2_YEAST Putative uncharacterized protein YCL002C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YCL002C PE=4
SV=4
Length = 263
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 21/199 (10%)
Query: 85 CQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEE-------YYLRNPH 137
CQ N +S+ GL++D L+ +G+ LY +S V+E+ +Y N
Sbjct: 20 CQKRYNKLHRSIYGLSYDLFLLDFVGNGLYLYCALHYCYSSLVREQLSQRFPLFYPLNDA 79
Query: 138 SANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKL-------LYTVYAVWVF 190
+ PI ++ S + + Q Y Y R + + +G + ++ V ++ +
Sbjct: 80 RSIPISSFLILKDFCVSCCCMMVLRQLY-YYRSTKHIYQGISITSIIIISVFLVLGIFTY 138
Query: 191 LSGFLALVHK------IHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
L K + +L+ IN ++ + KY PQ +N+ STVG S L
Sbjct: 139 GCSISNLPLKNSGKFGVFYLEHINYLWVMANLLKCFKYVPQMSINWMGCSTVGLSSKFAL 198
Query: 245 LDFAGGLFSLLQMLILAYN 263
+ F LL L++ N
Sbjct: 199 ISFLAESIDLLGRLVIPTN 217
>sp|B1Y856|COBQ_LEPCP Cobyric acid synthase OS=Leptothrix cholodnii (strain ATCC 51168 /
LMG 8142 / SP-6) GN=cobQ PE=3 SV=1
Length = 513
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 183 TVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGN 242
+ VW L+G ++IH I A+ L T+GW G+
Sbjct: 405 ATHGVWAALAGVAFDGYEIHNGRSIQHPAMASALPALRSTC---------GDTIGWQNGS 455
Query: 243 VLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWD 275
VL + GLF +L + G C+TLDS +D
Sbjct: 456 VLGVYTHGLFESPAVLQALFGAG-CRTLDSVFD 487
>sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus (strain ATCC 1007 /
CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl2 PE=3
SV=1
Length = 1389
Score = 33.1 bits (74), Expect = 3.6, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 204 LDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYN 263
L F+ Q A + + L+ P+ F+ + VGWS + DF G L S+
Sbjct: 387 LIFVKQRATVSVMTDLLAVHPRTRERFRSAAYVGWSNSSGSKDFLGNLLSM--------- 437
Query: 264 FGKCKTLDSY 273
G+ TLD +
Sbjct: 438 HGQLSTLDDF 447
>sp|Q5ZJX0|LAAT1_CHICK Lysosomal amino acid transporter 1 homolog OS=Gallus gallus
GN=PQLC2 PE=2 SV=1
Length = 303
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 71 IGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEE 130
IG I V + S Q+ N++RKS G++F L M+G+ LYG + +L P Q E
Sbjct: 193 IGSISSVLYLCSRLPQIYTNYRRKSTAGVSFLLFALVMLGNLLYGT-SVLLKNPEPGQSE 251
>sp|Q6ZP29|LAAT1_HUMAN Lysosomal amino acid transporter 1 homolog OS=Homo sapiens GN=PQLC2
PE=1 SV=1
Length = 291
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 56 VDVEKGHHWTTLSTIIGW----IYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGH 111
+ VE G T +IG+ I V + S Q+ N+ RKS G+++ L M+G+
Sbjct: 168 LSVESGSKPFTRQEVIGFVIGSISSVLYLLSRLPQIRTNFLRKSTQGISYSLFALVMLGN 227
Query: 112 SLYGV 116
+LYG+
Sbjct: 228 TLYGL 232
>sp|Q12010|YO092_YEAST Uncharacterized membrane protein YOL092W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOL092W PE=1
SV=1
Length = 308
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 21/80 (26%)
Query: 222 YAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLL---------QMLILAYNF-------- 264
+ PQ Y NF RKS+ G S+ V+L AG +F+L+ M+ILA +
Sbjct: 29 FVPQIYENFYRKSSDGLSLLFVVLWLAGDVFNLMGAVMQHLLSTMIILAAYYTVADIILL 88
Query: 265 GKCKTLDSYW----DQIHLS 280
G+C D+ D IHLS
Sbjct: 89 GQCLWYDNEEKPAVDPIHLS 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,853,774
Number of Sequences: 539616
Number of extensions: 5704197
Number of successful extensions: 15466
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 15410
Number of HSP's gapped (non-prelim): 47
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)