Query psy10696
Match_columns 174
No_of_seqs 158 out of 897
Neff 7.6
Searched_HMMs 46136
Date Fri Aug 16 16:16:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10696.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10696hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3626|consensus 100.0 3.7E-32 8.1E-37 245.4 11.8 173 2-174 235-647 (735)
2 PF03137 OATP: Organic Anion T 100.0 1E-30 2.2E-35 232.5 0.1 155 4-163 5-190 (539)
3 PF03137 OATP: Organic Anion T 100.0 3.8E-30 8.2E-35 228.8 -0.0 172 3-174 140-512 (539)
4 KOG3626|consensus 99.9 5.4E-28 1.2E-32 218.5 4.6 158 4-166 99-289 (735)
5 TIGR00805 oat sodium-independe 99.9 4.8E-23 1E-27 186.5 10.0 74 101-174 506-579 (633)
6 TIGR00805 oat sodium-independe 99.8 4.8E-20 1E-24 167.0 4.4 163 5-172 36-230 (633)
7 KOG1330|consensus 98.4 1E-06 2.2E-11 77.2 7.9 170 4-173 121-409 (493)
8 TIGR00885 fucP L-fucose:H+ sym 96.8 0.00018 3.9E-09 62.1 -1.3 145 2-172 3-152 (410)
9 TIGR00711 efflux_EmrB drug res 96.8 0.00022 4.7E-09 61.6 -0.9 143 2-173 2-149 (485)
10 PRK11663 regulatory protein Uh 96.7 0.00084 1.8E-08 58.0 2.1 125 28-173 45-170 (434)
11 PRK05122 major facilitator sup 96.6 0.00074 1.6E-08 57.1 1.2 150 3-172 16-170 (399)
12 PRK10054 putative transporter; 96.6 0.00045 9.8E-09 59.0 -0.2 142 4-173 9-155 (395)
13 cd06174 MFS The Major Facilita 96.5 0.00092 2E-08 54.2 0.7 140 5-173 2-146 (352)
14 KOG1330|consensus 96.5 0.0043 9.3E-08 54.8 4.7 127 4-158 35-166 (493)
15 TIGR00710 efflux_Bcr_CflA drug 96.4 0.00063 1.4E-08 56.6 -0.4 133 11-172 14-151 (385)
16 TIGR00891 2A0112 putative sial 96.3 0.0007 1.5E-08 56.5 -0.8 140 4-172 14-158 (405)
17 TIGR00894 2A0114euk Na(+)-depe 96.3 0.0011 2.5E-08 57.4 0.4 116 35-173 70-190 (465)
18 PRK14995 methyl viologen resis 96.3 0.00048 1E-08 60.6 -2.3 141 4-173 8-154 (495)
19 PRK11102 bicyclomycin/multidru 96.2 0.00081 1.7E-08 56.2 -1.1 121 27-172 12-137 (377)
20 PRK10091 MFS transport protein 96.2 0.0015 3.3E-08 55.2 0.4 139 4-171 5-148 (382)
21 PRK03699 putative transporter; 96.1 0.0024 5.2E-08 54.2 1.5 120 28-172 29-153 (394)
22 PRK03545 putative arabinose tr 96.1 0.0015 3.2E-08 55.3 0.0 122 26-172 29-155 (390)
23 PRK09705 cynX putative cyanate 96.1 0.0021 4.5E-08 54.8 0.9 131 2-156 5-139 (393)
24 PRK03633 putative MFS family t 96.1 0.00092 2E-08 56.4 -1.4 141 3-172 7-152 (381)
25 PF07690 MFS_1: Major Facilita 96.0 0.00071 1.5E-08 55.3 -2.4 138 8-173 2-144 (352)
26 PRK11273 glpT sn-glycerol-3-ph 96.0 0.0044 9.5E-08 53.8 2.4 120 33-169 56-176 (452)
27 PRK12382 putative transporter; 96.0 0.0026 5.6E-08 53.7 0.9 146 6-172 19-170 (392)
28 TIGR00900 2A0121 H+ Antiporter 95.9 0.00067 1.5E-08 55.6 -2.7 144 6-173 3-151 (365)
29 TIGR00897 2A0118 polyol permea 95.9 0.002 4.3E-08 54.9 -0.2 145 5-173 16-165 (402)
30 PRK09556 uhpT sugar phosphate 95.8 0.0011 2.3E-08 57.9 -2.2 121 29-169 52-177 (467)
31 TIGR00895 2A0115 benzoate tran 95.7 0.0019 4.1E-08 53.6 -0.9 138 7-173 22-164 (398)
32 COG2271 UhpC Sugar phosphate p 95.7 0.0052 1.1E-07 53.7 1.7 117 33-169 56-173 (448)
33 TIGR00883 2A0106 metabolite-pr 95.7 0.0017 3.7E-08 53.7 -1.5 146 7-173 224-372 (394)
34 cd06174 MFS The Major Facilita 95.6 0.0029 6.2E-08 51.3 -0.2 144 6-173 179-324 (352)
35 TIGR00893 2A0114 d-galactonate 95.6 0.0027 5.8E-08 52.2 -0.6 117 31-172 19-140 (399)
36 TIGR00898 2A0119 cation transp 95.6 0.009 1.9E-07 52.2 2.7 118 28-170 111-236 (505)
37 TIGR00900 2A0121 H+ Antiporter 95.5 0.002 4.3E-08 52.8 -1.6 118 36-173 242-360 (365)
38 TIGR00711 efflux_EmrB drug res 95.4 0.0043 9.2E-08 53.6 0.1 142 8-173 261-407 (485)
39 PRK10213 nepI ribonucleoside t 95.4 0.0035 7.6E-08 53.5 -0.4 120 28-172 42-166 (394)
40 PRK11646 multidrug resistance 95.3 0.0028 6.1E-08 54.2 -1.5 141 5-173 13-158 (400)
41 TIGR00879 SP MFS transporter, 95.2 0.0073 1.6E-07 51.1 1.0 109 40-170 71-183 (481)
42 TIGR00881 2A0104 phosphoglycer 95.1 0.003 6.5E-08 51.9 -1.7 112 31-167 20-136 (379)
43 PRK03893 putative sialic acid 95.1 0.0022 4.7E-08 55.8 -2.7 140 5-173 23-167 (496)
44 TIGR00899 2A0120 sugar efflux 95.1 0.0062 1.3E-07 50.5 0.0 77 8-87 3-81 (375)
45 PRK10489 enterobactin exporter 94.9 0.012 2.5E-07 50.3 1.3 118 35-173 253-371 (417)
46 PRK10489 enterobactin exporter 94.9 0.014 3.1E-07 49.7 1.8 148 6-173 21-169 (417)
47 TIGR00712 glpT glycerol-3-phos 94.8 0.046 9.9E-07 47.2 4.7 141 7-169 32-173 (438)
48 TIGR00892 2A0113 monocarboxyla 94.8 0.0091 2E-07 52.1 0.3 140 5-173 244-392 (455)
49 PRK09556 uhpT sugar phosphate 94.7 0.0068 1.5E-07 52.8 -0.6 146 8-174 264-410 (467)
50 PRK15402 multidrug efflux syst 94.7 0.009 2E-07 50.7 0.0 141 3-172 14-159 (406)
51 PRK10473 multidrug efflux syst 94.6 0.0067 1.5E-07 51.2 -0.8 121 27-172 24-149 (392)
52 PRK10077 xylE D-xylose transpo 94.5 0.016 3.5E-07 50.1 1.2 108 37-156 51-163 (479)
53 PRK11195 lysophospholipid tran 94.4 0.0073 1.6E-07 51.5 -1.2 138 4-173 5-147 (393)
54 PRK09874 drug efflux system pr 94.3 0.015 3.3E-07 48.9 0.5 141 4-173 16-165 (408)
55 PRK14995 methyl viologen resis 94.2 0.0099 2.1E-07 52.4 -0.8 123 33-173 287-410 (495)
56 PRK10504 putative transporter; 94.1 0.0074 1.6E-07 52.2 -1.7 140 5-173 13-157 (471)
57 TIGR00891 2A0112 putative sial 94.1 0.032 7E-07 46.4 2.2 119 35-173 268-387 (405)
58 TIGR02332 HpaX 4-hydroxyphenyl 94.0 0.01 2.3E-07 50.9 -1.0 139 5-172 11-154 (412)
59 PRK11551 putative 3-hydroxyphe 94.0 0.012 2.6E-07 49.7 -0.7 135 6-169 19-158 (406)
60 TIGR00890 2A0111 Oxalate/Forma 93.9 0.025 5.4E-07 46.4 1.1 121 34-173 233-354 (377)
61 PRK08633 2-acyl-glycerophospho 93.8 0.02 4.4E-07 54.9 0.5 148 4-173 11-162 (1146)
62 TIGR00893 2A0114 d-galactonate 93.7 0.022 4.8E-07 46.7 0.4 150 6-173 219-370 (399)
63 KOG2325|consensus 93.7 0.096 2.1E-06 46.8 4.4 140 4-168 36-183 (488)
64 TIGR00902 2A0127 phenyl propri 93.4 0.021 4.5E-07 48.3 -0.2 140 6-173 209-352 (382)
65 TIGR00895 2A0115 benzoate tran 93.3 0.028 6.2E-07 46.5 0.5 121 33-174 277-398 (398)
66 PRK12307 putative sialic acid 93.0 0.02 4.3E-07 48.7 -0.9 136 6-170 22-162 (426)
67 TIGR00924 yjdL_sub1_fam amino 92.9 0.037 8E-07 48.8 0.6 144 4-173 12-164 (475)
68 COG2814 AraJ Arabinose efflux 92.4 0.052 1.1E-06 47.2 0.8 123 6-156 17-144 (394)
69 TIGR00889 2A0110 nucleoside tr 92.3 0.012 2.5E-07 50.9 -3.3 114 40-173 251-368 (418)
70 TIGR00894 2A0114euk Na(+)-depe 92.2 0.09 1.9E-06 45.5 2.1 63 4-66 131-193 (465)
71 TIGR01299 synapt_SV2 synaptic 92.0 0.017 3.8E-07 54.0 -2.7 124 6-157 171-299 (742)
72 TIGR00897 2A0118 polyol permea 92.0 0.063 1.4E-06 45.7 0.9 142 9-173 229-373 (402)
73 TIGR00879 SP MFS transporter, 91.9 0.12 2.7E-06 43.5 2.6 129 34-173 312-442 (481)
74 PF05977 MFS_3: Transmembrane 91.7 0.069 1.5E-06 48.0 0.8 136 13-172 229-365 (524)
75 TIGR02332 HpaX 4-hydroxyphenyl 91.7 0.2 4.4E-06 42.9 3.7 142 8-173 248-392 (412)
76 PRK06814 acylglycerophosphoeth 91.6 0.087 1.9E-06 50.9 1.5 145 21-172 244-392 (1140)
77 PRK10133 L-fucose transporter; 91.6 0.036 7.9E-07 48.2 -1.0 142 2-169 26-172 (438)
78 TIGR00886 2A0108 nitrite extru 91.6 0.058 1.3E-06 44.5 0.2 115 32-169 28-149 (366)
79 TIGR00892 2A0113 monocarboxyla 91.4 0.033 7.2E-07 48.5 -1.4 122 27-173 40-166 (455)
80 TIGR00881 2A0104 phosphoglycer 91.4 0.078 1.7E-06 43.4 0.8 144 8-173 222-369 (379)
81 TIGR00901 2A0125 AmpG-related 91.3 0.074 1.6E-06 44.1 0.6 141 6-159 213-355 (356)
82 PRK08633 2-acyl-glycerophospho 91.1 0.15 3.1E-06 49.1 2.5 106 35-160 262-369 (1146)
83 PRK11043 putative transporter; 91.1 0.056 1.2E-06 45.7 -0.4 62 27-88 27-89 (401)
84 TIGR00901 2A0125 AmpG-related 91.0 0.057 1.2E-06 44.8 -0.4 123 31-173 13-142 (356)
85 TIGR02718 sider_RhtX_FptX side 91.0 0.05 1.1E-06 45.9 -0.8 143 12-173 218-363 (390)
86 PRK10504 putative transporter; 90.9 0.052 1.1E-06 46.9 -0.8 148 5-173 264-412 (471)
87 TIGR00890 2A0111 Oxalate/Forma 90.8 0.049 1.1E-06 44.6 -0.9 106 28-157 25-134 (377)
88 PRK15011 sugar efflux transpor 90.6 0.092 2E-06 44.6 0.5 79 4-85 17-97 (393)
89 TIGR00896 CynX cyanate transpo 90.5 0.091 2E-06 43.6 0.4 61 26-86 20-81 (355)
90 TIGR01299 synapt_SV2 synaptic 90.4 0.032 7E-07 52.2 -2.6 112 41-173 596-707 (742)
91 PRK11551 putative 3-hydroxyphe 90.3 0.054 1.2E-06 45.7 -1.1 118 35-173 249-367 (406)
92 PRK09528 lacY galactoside perm 90.3 0.039 8.5E-07 47.1 -2.0 113 37-173 258-375 (420)
93 PRK11652 emrD multidrug resist 90.3 0.064 1.4E-06 45.2 -0.7 62 27-88 29-91 (394)
94 TIGR00880 2_A_01_02 Multidrug 90.2 0.017 3.7E-07 40.3 -3.6 103 46-173 4-110 (141)
95 PRK15403 multidrug efflux syst 90.2 0.076 1.6E-06 45.7 -0.3 120 27-171 37-161 (413)
96 PRK11902 ampG muropeptide tran 90.1 0.09 1.9E-06 44.7 0.1 141 7-171 4-151 (402)
97 PRK10406 alpha-ketoglutarate t 90.1 0.22 4.8E-06 42.8 2.5 53 5-57 125-177 (432)
98 KOG3764|consensus 90.0 0.19 4.1E-06 44.1 1.9 107 40-173 106-219 (464)
99 TIGR00903 2A0129 major facilit 89.6 0.035 7.7E-07 47.2 -2.8 119 27-170 12-134 (368)
100 COG2814 AraJ Arabinose efflux 89.5 0.082 1.8E-06 46.0 -0.6 72 3-74 100-172 (394)
101 PF07690 MFS_1: Major Facilita 89.5 0.14 3E-06 41.7 0.7 67 6-73 87-153 (352)
102 PRK15075 citrate-proton sympor 89.3 0.083 1.8E-06 45.5 -0.8 121 36-173 269-391 (434)
103 PRK09952 shikimate transporter 89.2 0.31 6.7E-06 42.2 2.7 56 5-60 126-181 (438)
104 PRK09874 drug efflux system pr 89.0 0.11 2.4E-06 43.6 -0.2 108 41-173 259-370 (408)
105 PF03825 Nuc_H_symport: Nucleo 89.0 0.085 1.8E-06 45.7 -0.9 147 4-173 209-361 (400)
106 PRK09952 shikimate transporter 89.0 0.094 2E-06 45.4 -0.7 123 35-173 280-403 (438)
107 PRK03893 putative sialic acid 88.9 0.13 2.8E-06 44.7 0.1 119 35-173 305-425 (496)
108 PF06779 DUF1228: Protein of u 88.7 0.13 2.9E-06 35.1 0.1 61 30-90 16-77 (85)
109 TIGR00887 2A0109 phosphate:H+ 88.7 0.16 3.5E-06 44.7 0.6 135 5-158 19-160 (502)
110 PRK11273 glpT sn-glycerol-3-ph 88.6 0.15 3.3E-06 44.1 0.4 144 9-173 260-407 (452)
111 PRK11128 putative 3-phenylprop 88.6 0.14 3E-06 43.2 0.1 139 7-173 210-352 (382)
112 TIGR00883 2A0106 metabolite-pr 88.5 0.62 1.3E-05 38.3 4.0 58 5-62 97-154 (394)
113 KOG2533|consensus 88.4 0.34 7.3E-06 43.4 2.4 84 4-87 134-224 (495)
114 TIGR00712 glpT glycerol-3-phos 88.1 0.11 2.4E-06 44.8 -0.8 143 9-173 258-405 (438)
115 TIGR00792 gph sugar (Glycoside 88.1 0.56 1.2E-05 39.8 3.6 109 34-156 28-143 (437)
116 PRK11646 multidrug resistance 87.9 0.27 5.8E-06 42.0 1.4 41 132-173 316-356 (400)
117 PRK10642 proline/glycine betai 87.9 0.4 8.7E-06 42.1 2.6 55 5-59 119-173 (490)
118 TIGR00792 gph sugar (Glycoside 87.3 0.41 8.9E-06 40.7 2.2 145 6-173 226-377 (437)
119 PRK03699 putative transporter; 87.2 0.12 2.6E-06 43.8 -1.1 72 8-82 211-283 (394)
120 PLN00028 nitrate transmembrane 86.6 0.18 4E-06 44.2 -0.3 106 28-157 58-167 (476)
121 PRK10406 alpha-ketoglutarate t 86.5 0.2 4.4E-06 43.0 -0.1 123 34-172 272-395 (432)
122 PRK03545 putative arabinose tr 85.7 0.21 4.6E-06 42.1 -0.4 62 4-65 97-158 (390)
123 KOG0254|consensus 84.6 0.97 2.1E-05 40.0 3.3 80 4-83 142-225 (513)
124 PRK15462 dipeptide/tripeptide 84.3 0.29 6.3E-06 43.8 -0.1 141 8-173 15-161 (493)
125 PRK10077 xylE D-xylose transpo 84.1 0.7 1.5E-05 39.8 2.1 57 5-61 121-177 (479)
126 TIGR00899 2A0120 sugar efflux 83.7 0.19 4.1E-06 41.6 -1.5 31 142-173 316-346 (375)
127 TIGR01272 gluP glucose/galacto 83.1 0.72 1.6E-05 38.3 1.7 62 3-64 9-70 (310)
128 PRK10642 proline/glycine betai 83.0 0.37 7.9E-06 42.3 -0.1 121 34-173 279-401 (490)
129 TIGR01301 GPH_sucrose GPH fami 82.1 0.9 2E-05 40.5 2.1 155 7-168 7-170 (477)
130 PRK12382 putative transporter; 81.8 0.57 1.2E-05 39.4 0.7 60 4-63 112-171 (392)
131 PRK12307 putative sialic acid 81.7 0.72 1.6E-05 39.1 1.2 59 4-62 106-164 (426)
132 COG0738 FucP Fucose permease [ 80.8 0.83 1.8E-05 40.0 1.3 146 3-174 14-164 (422)
133 PRK15075 citrate-proton sympor 80.5 1.5 3.2E-05 37.8 2.8 57 6-62 119-175 (434)
134 KOG2532|consensus 80.1 1.4 3.1E-05 39.1 2.6 59 6-64 130-188 (466)
135 TIGR00896 CynX cyanate transpo 80.0 0.39 8.4E-06 39.8 -1.0 112 36-173 227-345 (355)
136 TIGR00880 2_A_01_02 Multidrug 79.8 0.99 2.1E-05 31.1 1.2 60 6-65 53-112 (141)
137 PRK06814 acylglycerophosphoeth 79.3 0.92 2E-05 44.0 1.2 62 4-65 108-169 (1140)
138 PRK15403 multidrug efflux syst 79.3 0.9 2E-05 39.0 1.1 62 4-65 104-165 (413)
139 PRK11010 ampG muropeptide tran 78.8 0.35 7.6E-06 42.7 -1.6 138 16-173 236-375 (491)
140 PRK11010 ampG muropeptide tran 78.5 0.67 1.5E-05 40.9 0.1 142 6-171 16-164 (491)
141 TIGR00885 fucP L-fucose:H+ sym 78.2 1.2 2.6E-05 38.4 1.5 60 4-63 94-153 (410)
142 PRK10213 nepI ribonucleoside t 78.2 1.1 2.4E-05 38.1 1.3 62 4-65 108-169 (394)
143 PRK11195 lysophospholipid tran 78.0 0.71 1.5E-05 39.3 0.0 56 8-63 92-147 (393)
144 TIGR00806 rfc RFC reduced fola 77.2 0.24 5.3E-06 44.4 -3.1 136 5-172 30-172 (511)
145 PF03209 PUCC: PUCC protein; 76.7 1.5 3.3E-05 38.3 1.7 128 36-173 10-148 (403)
146 TIGR00882 2A0105 oligosacchari 76.7 0.49 1.1E-05 40.0 -1.3 110 40-173 254-367 (396)
147 PRK09848 glucuronide transport 76.3 1.1 2.4E-05 38.6 0.8 145 7-173 233-385 (448)
148 KOG2532|consensus 76.2 0.84 1.8E-05 40.5 0.0 103 33-158 65-173 (466)
149 TIGR00710 efflux_Bcr_CflA drug 76.1 1.6 3.4E-05 36.1 1.6 61 4-64 93-153 (385)
150 TIGR01272 gluP glucose/galacto 75.8 0.89 1.9E-05 37.7 0.1 139 6-173 144-287 (310)
151 KOG2615|consensus 75.6 0.56 1.2E-05 41.0 -1.2 130 18-173 41-179 (451)
152 TIGR00886 2A0108 nitrite extru 75.1 2.9 6.3E-05 34.3 3.0 109 35-160 255-364 (366)
153 PRK10054 putative transporter; 75.0 0.85 1.8E-05 38.9 -0.3 31 141-173 326-356 (395)
154 PRK10207 dipeptide/tripeptide 74.4 1.7 3.6E-05 38.6 1.4 78 9-89 21-100 (489)
155 PRK10133 L-fucose transporter; 74.1 1.8 3.9E-05 37.6 1.5 60 4-63 117-176 (438)
156 TIGR00903 2A0129 major facilit 74.0 1.1 2.4E-05 38.1 0.1 66 4-70 79-145 (368)
157 KOG3764|consensus 73.7 1.6 3.5E-05 38.5 1.1 60 4-63 159-219 (464)
158 COG2271 UhpC Sugar phosphate p 73.5 0.73 1.6E-05 40.6 -1.0 161 4-173 121-311 (448)
159 PRK05122 major facilitator sup 72.4 2 4.4E-05 36.0 1.4 52 4-55 112-163 (399)
160 PTZ00207 hypothetical protein; 72.3 0.57 1.2E-05 42.9 -2.1 145 4-171 27-177 (591)
161 PRK03633 putative MFS family t 72.3 1.9 4.1E-05 36.2 1.2 62 4-65 94-155 (381)
162 COG2270 Permeases of the major 71.6 1.6 3.4E-05 38.5 0.6 139 4-171 254-398 (438)
163 TIGR00887 2A0109 phosphate:H+ 71.4 2.6 5.6E-05 37.0 1.9 58 4-61 115-172 (502)
164 PRK10091 MFS transport protein 70.8 1.8 3.8E-05 36.5 0.7 61 4-64 91-151 (382)
165 TIGR00898 2A0119 cation transp 70.6 4.4 9.5E-05 35.3 3.1 59 4-62 180-238 (505)
166 PF00083 Sugar_tr: Sugar (and 70.6 0.72 1.6E-05 39.5 -1.7 60 4-63 102-161 (451)
167 TIGR00806 rfc RFC reduced fola 70.5 1.8 3.9E-05 39.0 0.7 62 3-65 114-175 (511)
168 TIGR00882 2A0105 oligosacchari 68.7 1.7 3.6E-05 36.7 0.1 64 6-72 6-70 (396)
169 PF05978 UNC-93: Ion channel r 68.4 3.3 7.1E-05 31.3 1.6 58 5-62 90-147 (156)
170 COG0738 FucP Fucose permease [ 68.3 4.4 9.5E-05 35.6 2.6 61 3-63 103-163 (422)
171 KOG2615|consensus 68.1 1.2 2.6E-05 39.1 -0.9 61 4-65 121-181 (451)
172 PF00083 Sugar_tr: Sugar (and 66.5 2.1 4.6E-05 36.6 0.3 50 40-90 46-96 (451)
173 PF03825 Nuc_H_symport: Nucleo 65.7 3.5 7.7E-05 35.7 1.5 60 4-63 301-361 (400)
174 PRK09584 tppB putative tripept 65.3 3 6.4E-05 37.0 1.0 82 5-89 24-107 (500)
175 PRK09705 cynX putative cyanate 64.9 3.9 8.4E-05 34.7 1.6 61 4-65 97-157 (393)
176 KOG0255|consensus 64.7 6.8 0.00015 34.5 3.2 61 4-65 171-231 (521)
177 PRK11902 ampG muropeptide tran 64.4 1.5 3.3E-05 37.2 -1.0 107 34-156 238-346 (402)
178 PF05978 UNC-93: Ion channel r 63.5 5.3 0.00011 30.2 1.9 90 41-159 42-135 (156)
179 PF13347 MFS_2: MFS/sugar tran 62.6 16 0.00034 31.3 4.9 136 3-163 226-372 (428)
180 PRK15011 sugar efflux transpor 62.0 2.1 4.4E-05 36.3 -0.6 31 142-173 333-363 (393)
181 PRK10473 multidrug efflux syst 61.9 3.9 8.3E-05 34.3 1.0 59 5-63 92-150 (392)
182 PRK15402 multidrug efflux syst 61.5 4.4 9.5E-05 34.2 1.3 59 5-63 102-160 (406)
183 PRK11663 regulatory protein Uh 60.3 3.3 7.2E-05 35.6 0.4 61 5-65 112-172 (434)
184 PF11700 ATG22: Vacuole efflux 60.0 3.1 6.7E-05 37.0 0.1 147 4-173 283-439 (477)
185 PRK09528 lacY galactoside perm 59.7 3.3 7.2E-05 35.2 0.3 62 7-71 15-77 (420)
186 PRK11102 bicyclomycin/multidru 57.0 5.1 0.00011 33.1 1.0 60 5-64 80-139 (377)
187 TIGR00902 2A0127 phenyl propri 56.6 3.4 7.4E-05 34.8 -0.2 60 6-66 295-355 (382)
188 KOG0255|consensus 56.3 9.4 0.0002 33.6 2.6 96 33-153 110-211 (521)
189 PRK11043 putative transporter; 55.7 6.9 0.00015 32.9 1.6 59 4-62 94-152 (401)
190 PRK10207 dipeptide/tripeptide 54.3 8.7 0.00019 34.1 2.0 59 7-65 108-168 (489)
191 PF06813 Nodulin-like: Nodulin 54.1 7.4 0.00016 31.7 1.4 79 4-87 2-83 (250)
192 TIGR00788 fbt folate/biopterin 54.0 6.7 0.00014 34.5 1.2 126 35-172 282-409 (468)
193 PRK11652 emrD multidrug resist 52.8 4.7 0.0001 33.8 0.1 62 4-65 96-157 (394)
194 PRK09848 glucuronide transport 52.5 7.9 0.00017 33.3 1.4 113 25-154 31-151 (448)
195 KOG0254|consensus 50.9 21 0.00045 31.6 3.9 49 41-89 90-138 (513)
196 KOG0252|consensus 47.4 5.8 0.00013 35.7 -0.2 108 31-155 74-186 (538)
197 KOG2533|consensus 47.2 15 0.00033 33.0 2.4 137 4-168 47-188 (495)
198 PF12832 MFS_1_like: MFS_1 lik 46.7 9.7 0.00021 25.1 0.9 46 28-73 22-68 (77)
199 PRK11128 putative 3-phenylprop 45.1 16 0.00034 30.7 2.1 64 6-71 96-160 (382)
200 PTZ00207 hypothetical protein; 43.8 12 0.00026 34.4 1.2 52 3-55 119-170 (591)
201 TIGR02718 sider_RhtX_FptX side 43.5 16 0.00035 30.6 1.9 64 6-73 5-73 (390)
202 PF13347 MFS_2: MFS/sugar tran 42.7 28 0.0006 29.8 3.3 55 35-89 31-91 (428)
203 TIGR00924 yjdL_sub1_fam amino 41.6 9.2 0.0002 33.6 0.2 60 4-63 381-440 (475)
204 TIGR00889 2A0110 nucleoside tr 41.2 11 0.00023 32.5 0.5 70 5-74 309-386 (418)
205 PF05977 MFS_3: Transmembrane 40.8 9.9 0.00022 34.3 0.3 62 4-65 103-168 (524)
206 KOG4686|consensus 40.7 14 0.00029 31.8 1.0 64 15-81 277-342 (459)
207 COG2807 CynX Cyanate permease 37.2 14 0.0003 32.2 0.6 129 7-160 13-145 (395)
208 KOG2563|consensus 37.0 52 0.0011 29.5 4.1 131 22-171 60-201 (480)
209 KOG2504|consensus 36.5 18 0.0004 32.4 1.3 78 3-84 299-379 (509)
210 PF05255 UPF0220: Uncharacteri 35.9 1.3E+02 0.0028 23.0 5.7 30 133-162 117-148 (166)
211 KOG3762|consensus 35.3 7.8 0.00017 35.5 -1.3 77 10-87 465-546 (618)
212 COG0477 ProP Permeases of the 31.6 20 0.00043 27.1 0.6 60 4-63 94-155 (338)
213 PF03209 PUCC: PUCC protein; 30.9 29 0.00063 30.5 1.5 111 35-166 238-357 (403)
214 KOG2504|consensus 30.8 18 0.00039 32.5 0.2 131 4-159 45-180 (509)
215 PLN00028 nitrate transmembrane 29.7 38 0.00082 29.6 2.1 55 5-60 125-179 (476)
216 KOG0252|consensus 28.0 10 0.00022 34.2 -1.7 56 4-59 144-199 (538)
217 PRK09584 tppB putative tripept 26.6 29 0.00062 30.8 0.8 59 6-64 384-442 (500)
218 PRK09669 putative symporter Ya 25.3 54 0.0012 28.1 2.2 124 36-174 40-170 (444)
219 KOG3098|consensus 25.2 80 0.0017 28.2 3.3 58 6-63 104-161 (461)
220 PRK10429 melibiose:sodium symp 23.6 1.1E+02 0.0024 26.6 3.9 119 36-168 37-162 (473)
221 PF06609 TRI12: Fungal trichot 22.1 51 0.0011 30.5 1.5 109 41-170 350-461 (599)
222 COG2211 MelB Na+/melibiose sym 20.6 91 0.002 27.9 2.7 82 4-86 116-199 (467)
223 PF11700 ATG22: Vacuole efflux 20.1 43 0.00094 29.8 0.6 66 7-72 383-448 (477)
224 COG2807 CynX Cyanate permease 20.0 21 0.00046 31.1 -1.3 62 12-74 215-277 (395)
No 1
>KOG3626|consensus
Probab=99.97 E-value=3.7e-32 Score=245.39 Aligned_cols=173 Identities=36% Similarity=0.751 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccC-----C-C------CCc
Q psy10696 2 FSVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLG-----G-K------GHK 69 (174)
Q Consensus 2 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g-----~-~------~~~ 69 (174)
.+|.+|+++|++.|+|.+++++++++|||||.|+.+.|.|+|++.+...+||++|++++|++. - . .+|
T Consensus 235 ~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~D 314 (735)
T KOG3626|consen 235 YPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTD 314 (735)
T ss_pred hhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCC
Confidence 378999999999999999999999999999999999999999999999999999999999762 1 1 589
Q ss_pred ceeee---ehhhhhhhhcccccc---------------------------------------------------------
Q psy10696 70 TKWVA---LGSIIMSIGCFLRTY--------------------------------------------------------- 89 (174)
Q Consensus 70 prwig---~g~l~~~~g~~l~~l--------------------------------------------------------- 89 (174)
|||+| +|+++.+.-.++.+.
T Consensus 315 PrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if 394 (735)
T KOG3626|consen 315 PRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIF 394 (735)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchH
Confidence 99998 899998875554110
Q ss_pred --------------------------------------------------------------------------------
Q psy10696 90 -------------------------------------------------------------------------------- 89 (174)
Q Consensus 90 -------------------------------------------------------------------------------- 89 (174)
T Consensus 395 ~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 395 MLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred HHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy10696 90 -------------------------------------------------------------------------------- 89 (174)
Q Consensus 90 -------------------------------------------------------------------------------- 89 (174)
T Consensus 475 l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~ 554 (735)
T KOG3626|consen 475 LLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGN 554 (735)
T ss_pred HHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCc
Confidence
Q ss_pred ---cccccCC-----CCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhh
Q psy10696 90 ---TNCSCIP-----NGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGL 161 (174)
Q Consensus 90 ---~~c~c~~-----~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rll 161 (174)
+||+|.+ ++.+++|.|+.+|.+.+..|+.++++..++.+++++|.+.+.+|+|+||+|++++|++++++|+|
T Consensus 555 ~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irll 634 (735)
T KOG3626|consen 555 TIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLL 634 (735)
T ss_pred eeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHH
Confidence 0245543 22566788999987777889999999999999999999999999999999999999999999999
Q ss_pred ccCcchhhhhccC
Q psy10696 162 AFIPGPIIYGALL 174 (174)
Q Consensus 162 g~IP~Pi~fG~~i 174 (174)
|+||+||+|||+|
T Consensus 635 g~IPsPIifG~~I 647 (735)
T KOG3626|consen 635 GFIPSPIIFGAVI 647 (735)
T ss_pred hcCCchHhhhhhH
Confidence 9999999999987
No 2
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.96 E-value=1e-30 Score=232.47 Aligned_cols=155 Identities=23% Similarity=0.417 Sum_probs=3.0
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
++++|+..++| +..++|+. +.++++||||+++| ++|++.++|||++++..++++|+|+|+|||||+|+|.+++++
T Consensus 5 l~~~~~~~~~q-~~~~g~~~---~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 5 LVFLCLLGLFQ-MMVSGYVN---SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHH-HHHHHHHH---HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 56789999999 55888777 55568899999998 999999999999999999999999999999999999999999
Q ss_pred hcccccccccccCCC-----------CccccCCC------------CCC--c-cchhHHHHHHHHHHHHHhhcCccCcee
Q psy10696 83 GCFLRTYTNCSCIPN-----------GMATQGAC------------PAD--C-GSHFMWFIFILCLLNFFSATGRAGNTI 136 (174)
Q Consensus 83 g~~l~~l~~c~c~~~-----------~~~~~~~C------------~~~--C-~~~~~~f~~lf~~~q~l~g~g~tP~~~ 136 (174)
|++++++||....+. .....+.| +.. + ++..+.|+.+|+++|++.|+|++|+|+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 999999987432110 01122334 111 1 122455778899999999999999999
Q ss_pred EEee----ecCCCCchhHHHHHHHHHHhhcc
Q psy10696 137 IQFR----CVSPEDKSLSIGITEALGCGLAF 163 (174)
Q Consensus 137 lgl~----~V~~~~sslylGi~~~~~rllg~ 163 (174)
+|++ ||+++++|+|+|+.++ ++++|.
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~-~~~lGP 190 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYA-MSILGP 190 (539)
T ss_dssp -------------------------------
T ss_pred ceeeeeccccccccCccchhhhhH-HhhccH
Confidence 9998 5889999999999987 444443
No 3
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.95 E-value=3.8e-30 Score=228.82 Aligned_cols=172 Identities=35% Similarity=0.745 Sum_probs=3.0
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC---------------CC
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG---------------KG 67 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~---------------~~ 67 (174)
.+.+|+++|+++|+|.+++|+++++|||||+|+.+.+.|+|++.+...+||++|+++.+++-. +.
T Consensus 140 ~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p 219 (539)
T PF03137_consen 140 YFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITP 219 (539)
T ss_dssp ------------SSS-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCC
Confidence 467899999999999999999999999999999998889999999999999999999996621 24
Q ss_pred Ccceeee---ehhhhhhhhcccccc-------------------------------------------------------
Q psy10696 68 HKTKWVA---LGSIIMSIGCFLRTY------------------------------------------------------- 89 (174)
Q Consensus 68 ~~prwig---~g~l~~~~g~~l~~l------------------------------------------------------- 89 (174)
+||||+| +|+++.+...++.++
T Consensus 220 ~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~ 299 (539)
T PF03137_consen 220 SDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALK 299 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHH
Confidence 7999998 899988887665331
Q ss_pred --------------------------------------------------------------------------------
Q psy10696 90 -------------------------------------------------------------------------------- 89 (174)
Q Consensus 90 -------------------------------------------------------------------------------- 89 (174)
T Consensus 300 ~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~ 379 (539)
T PF03137_consen 300 RLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKF 379 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHH
Confidence
Q ss_pred -------------------------------c------------ccccCCC-----CccccCCCCCCccchhHHHHHHHH
Q psy10696 90 -------------------------------T------------NCSCIPN-----GMATQGACPADCGSHFMWFIFILC 121 (174)
Q Consensus 90 -------------------------------~------------~c~c~~~-----~~~~~~~C~~~C~~~~~~f~~lf~ 121 (174)
+ .+.|++. +++++|.|+++|.+++..|+.+++
T Consensus 380 ~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~ 459 (539)
T PF03137_consen 380 CIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLF 459 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHH
Confidence 0 0122111 134578898887776778888889
Q ss_pred HHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhccC
Q psy10696 122 LLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGALL 174 (174)
Q Consensus 122 ~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~i 174 (174)
+..++.+++.+|.+.+.+|+|+++||++++|+++++.|++|+|||||+||++|
T Consensus 460 ~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~ii 512 (539)
T PF03137_consen 460 ILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAII 512 (539)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHH
Confidence 99999999999999999999999999999999999999999999999999986
No 4
>KOG3626|consensus
Probab=99.94 E-value=5.4e-28 Score=218.49 Aligned_cols=158 Identities=19% Similarity=0.406 Sum_probs=126.2
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
++.+++..+.||+.. +|++ +.|+++||||++++ +.|+|.+.||+|+++..++++|+|+|+|||||||+|.+++++
T Consensus 99 l~~l~~~~~~q~l~~-~y~~---s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYV-GYFN---SVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHHHhhh-hhhh---hhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 567888999999966 6666 66778899999997 999999999999999999999999999999999999999999
Q ss_pred hcccccccccccC---------------CCC-------ccccCCCC---CCcc---chhHHHHHHHHHHHHHhhcCccCc
Q psy10696 83 GCFLRTYTNCSCI---------------PNG-------MATQGACP---ADCG---SHFMWFIFILCLLNFFSATGRAGN 134 (174)
Q Consensus 83 g~~l~~l~~c~c~---------------~~~-------~~~~~~C~---~~C~---~~~~~f~~lf~~~q~l~g~g~tP~ 134 (174)
|+++.++||.... ... ......|. ++|+ +....++.+|+++|++.|+|++|.
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 9999999863110 000 01123443 2232 223345667889999999999999
Q ss_pred eeEEeee----cCCCCchhHHHHHHHHHHhhccCcc
Q psy10696 135 TIIQFRC----VSPEDKSLSIGITEALGCGLAFIPG 166 (174)
Q Consensus 135 ~~lgl~~----V~~~~sslylGi~~~~~rllg~IP~ 166 (174)
+++|++| |+++++|+|+|+.++ +|+||.+.|
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~-~~~lGPaiG 289 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYS-MAILGPAIG 289 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHH-HHHhhhHHH
Confidence 9999985 778999999999996 677665544
No 5
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.89 E-value=4.8e-23 Score=186.48 Aligned_cols=74 Identities=30% Similarity=0.619 Sum_probs=68.4
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhccC
Q psy10696 101 TQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGALL 174 (174)
Q Consensus 101 ~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~i 174 (174)
++|.|+++|++.+..|+.++++..++.+++.+|.+++.+|+|+||+|++++|++++++|+||+||+||+||++|
T Consensus 506 ~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~i 579 (633)
T TIGR00805 506 KKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLI 579 (633)
T ss_pred cCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhh
Confidence 34678888987667788888999999999999999999999999999999999999999999999999999986
No 6
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.79 E-value=4.8e-20 Score=167.00 Aligned_cols=163 Identities=18% Similarity=0.336 Sum_probs=124.3
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
+.++++.+.|++ .+++.+ +.++++||||++++ +.|++.+.+|++.+++.++++|+++|.|||||+++|.+++++|
T Consensus 36 ~~~~~~~~~~~~-~~g~~~---~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg 111 (633)
T TIGR00805 36 LLLTCAQLQGLL-YNGLVN---SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG 111 (633)
T ss_pred HHHHHHHHHHHH-HHHHHH---hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH
Confidence 334445555554 566666 55568899999997 9999999999999999999999999999999999999999999
Q ss_pred ccccccccc-----------------------ccCCC--CccccCCCCCCccchh--HHHHHHHHHHHHHhhcCccCcee
Q psy10696 84 CFLRTYTNC-----------------------SCIPN--GMATQGACPADCGSHF--MWFIFILCLLNFFSATGRAGNTI 136 (174)
Q Consensus 84 ~~l~~l~~c-----------------------~c~~~--~~~~~~~C~~~C~~~~--~~f~~lf~~~q~l~g~g~tP~~~ 136 (174)
+++++++|. .|..+ ++..++.|+++|+++. ..++.++++++++.|+|.+|.++
T Consensus 112 ~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 112 SFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 999998752 12111 1122234555665422 12344567899999999999999
Q ss_pred EEee----ecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 137 IQFR----CVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 137 lgl~----~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
++.+ ++++++|+.|+|+.+. ...+|...||++.|+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~-~~~iG~~lG~llgg~ 230 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILES-IAVFGPAFGYLLGSF 230 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHH-HHHhhhHHHHHHHHH
Confidence 9987 4788999999999876 566677777776654
No 7
>KOG1330|consensus
Probab=98.40 E-value=1e-06 Score=77.16 Aligned_cols=170 Identities=19% Similarity=0.271 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCCC--Ccceee--eehhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGKG--HKTKWV--ALGSII 79 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~~--~~prwi--g~g~l~ 79 (174)
+-.+.++|-+.|+|++.+.++..+.|+|+.+.-+.+...|+++-+-.+|..++++..++.++.. ||=-.. |+..++
T Consensus 121 Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi 200 (493)
T KOG1330|consen 121 FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVI 200 (493)
T ss_pred HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHH
Confidence 3457889999999999999999999999999999899999999999999999999999997652 332222 233333
Q ss_pred hhhhcccccc-------------------------------------------------------------------ccc
Q psy10696 80 MSIGCFLRTY-------------------------------------------------------------------TNC 92 (174)
Q Consensus 80 ~~~g~~l~~l-------------------------------------------------------------------~~c 92 (174)
+++-.+++.. .++
T Consensus 201 ~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~ 280 (493)
T KOG1330|consen 201 VGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGF 280 (493)
T ss_pred HHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCC
Confidence 3332222210 000
Q ss_pred -----------ccCCC------C------------ccccCCCC-------------------CCccchhHHHHHHHHHHH
Q psy10696 93 -----------SCIPN------G------------MATQGACP-------------------ADCGSHFMWFIFILCLLN 124 (174)
Q Consensus 93 -----------~c~~~------~------------~~~~~~C~-------------------~~C~~~~~~f~~lf~~~q 124 (174)
+|... + +.....|+ ..++++.+..+.+++++.
T Consensus 281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~ 360 (493)
T KOG1330|consen 281 DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGE 360 (493)
T ss_pred ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 01000 0 00011121 122334444556778899
Q ss_pred HHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 125 FFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 125 ~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
++.-.+.++...+-+..|+|+.|+.+.+++..+.+++|+.++|-+.|.+
T Consensus 361 ~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGil 409 (493)
T KOG1330|consen 361 TISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGIL 409 (493)
T ss_pred HHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhH
Confidence 9999999999999999999999999999999999999999999666643
No 8
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=96.82 E-value=0.00018 Score=62.10 Aligned_cols=145 Identities=10% Similarity=0.081 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhh
Q psy10696 2 FSVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIM 80 (174)
Q Consensus 2 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~ 80 (174)
++++.+++.-++.|...+ +..+.+++.+++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|-|.+-+|.+++
T Consensus 3 ~~~~~~~~~f~~~G~~~~----~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~ 78 (410)
T TIGR00885 3 IPFALITSLFALWGFAND----ITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLY 78 (410)
T ss_pred cHHHHHHHHHHHHHHHHH----hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 578888888888898543 33355567788999996 9999999999999999999999888755555667888888
Q ss_pred hhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCcee----EEeeecCCCCchhHHHHHHH
Q psy10696 81 SIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTI----IQFRCVSPEDKSLSIGITEA 156 (174)
Q Consensus 81 ~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~----lgl~~V~~~~sslylGi~~~ 156 (174)
++|+++..... . .++.+. +.+..++.|+|.+-..+ ...+..++++++..+++...
T Consensus 79 ~~g~~l~~~~~--~---------------~~~~~~----~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (410)
T TIGR00885 79 ALGAFLFWPAA--E---------------IMNYTL----FLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQS 137 (410)
T ss_pred HHHHHHHHHHH--h---------------hccHHH----HHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHH
Confidence 88876643210 0 011122 23455666666554443 33345677888888888776
Q ss_pred HHHhhccCcchhhhhc
Q psy10696 157 LGCGLAFIPGPIIYGA 172 (174)
Q Consensus 157 ~~rllg~IP~Pi~fG~ 172 (174)
. .-+|...+|.+.+.
T Consensus 138 ~-~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 138 F-NPFGSIIGMVVAQQ 152 (410)
T ss_pred H-HHHHHHHHHHHHHH
Confidence 4 44566677766543
No 9
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=96.81 E-value=0.00022 Score=61.62 Aligned_cols=143 Identities=10% Similarity=0.180 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhh
Q psy10696 2 FSVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIM 80 (174)
Q Consensus 2 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~ 80 (174)
..+..++++.++..+..+. .+ ..+.++.++++.+. +.|++.+.+.++.+++.++.+.+.+|-.|.|++-++.++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~---~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 77 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTI-VN---VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAF 77 (485)
T ss_pred cHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHH
Confidence 4566777788888775443 33 33456678888885 9999999999999999999999888755556667777787
Q ss_pred hhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHH
Q psy10696 81 SIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEA 156 (174)
Q Consensus 81 ~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~ 156 (174)
++++++..+. ++ .. .+.++.++.|++.+...+.. .+.+++++|+.+.|+...
T Consensus 78 ~~~~~~~~~~-------------------~~-~~----~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 133 (485)
T TIGR00711 78 TLGSLLCGVA-------------------PN-LE----LMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGL 133 (485)
T ss_pred HHHHHHHhCc-------------------CC-HH----HHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 7777765432 01 11 12456777777776555443 346888999999998765
Q ss_pred HHHhhccCcchhhhhcc
Q psy10696 157 LGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 157 ~~rllg~IP~Pi~fG~~ 173 (174)
...+|.+.+|++.|++
T Consensus 134 -~~~~g~~~g~~~~~~l 149 (485)
T TIGR00711 134 -TVLVAPALGPTLGGWI 149 (485)
T ss_pred -HHHHHhhhhhccHhHh
Confidence 4555677777776654
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=96.71 E-value=0.00084 Score=57.96 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=84.7
Q ss_pred eecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCC
Q psy10696 28 YLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACP 106 (174)
Q Consensus 28 ~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~ 106 (174)
.++++.++++.+. +.|.+.+.+.++..++.++.+++.+|-.+-|.+.++.++.++++++..+.
T Consensus 45 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------------- 108 (434)
T PRK11663 45 AMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS---------------- 108 (434)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH----------------
Confidence 3456667788886 99999999999999999999999887555456678888888877765432
Q ss_pred CCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 107 ADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 107 ~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
++.+.+....++..+..|.+..+...+.-+..++++|+.++|+.+... -+|.+-+|.+.|++
T Consensus 109 ----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~-~~g~~~~~~~~~~l 170 (434)
T PRK11663 109 ----SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAH-NVGGALIPLVVGAI 170 (434)
T ss_pred ----hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 111222222222334445444444444445678899999999998754 46677777776654
No 11
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.64 E-value=0.00074 Score=57.07 Aligned_cols=150 Identities=11% Similarity=-0.001 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhh
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~ 81 (174)
.+..++++.++..++.+...+....+ ++++++.+. +.|.+.+.+.++.++...+.+.+.+|-.|-|.+-.+.++.+
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~---i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGY---VHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHH
Confidence 35667888888888765544433332 356778775 99999999999999999999999887655556667777777
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~ 157 (174)
++++...+...... ..... ...+.+..++.|++.+...+.. .+.+++|+|+.+.|+....
T Consensus 93 ~~~~~~~~~~~~~~---------------~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 156 (399)
T PRK05122 93 LSGLLYLLAGLLAA---------------WPVLS-LLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIA 156 (399)
T ss_pred HHHHHHHHhhhhhc---------------cchhH-HHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhh
Confidence 66655433211000 00011 1123456777888776655443 3467899999999986653
Q ss_pred HHhhccCcchhhhhc
Q psy10696 158 GCGLAFIPGPIIYGA 172 (174)
Q Consensus 158 ~rllg~IP~Pi~fG~ 172 (174)
..+|.+.||.+-|+
T Consensus 157 -~~~g~~~g~~l~~~ 170 (399)
T PRK05122 157 -TYGALAIGAPLGVL 170 (399)
T ss_pred -hhHHHHHHHHHHHH
Confidence 33466666665554
No 12
>PRK10054 putative transporter; Provisional
Probab=96.63 E-value=0.00045 Score=59.02 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
+..+++.+++...+.+...+....++ +++++.+. +.|.+.+.+.++..+..++.+++.+|-+|.|.+-++.+..++
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l---~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYL---SRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS 85 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence 45677788888888777777666666 45678885 999999999999999999999988875444455566666666
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALG 158 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~ 158 (174)
+.+...+.+ + .+.+.. ...+.+.+..+..+.. -+.+++++|+.++|+.....
T Consensus 86 ~~~~~~~~~-------------------~-~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 141 (395)
T PRK10054 86 GFIAIPLVN-------------------N-VTLVVL----FFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTML 141 (395)
T ss_pred HHHHHHHHh-------------------H-HHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Confidence 665543321 0 111111 1122232222222221 23467888999999888866
Q ss_pred HhhccCcchhhhhcc
Q psy10696 159 CGLAFIPGPIIYGAL 173 (174)
Q Consensus 159 rllg~IP~Pi~fG~~ 173 (174)
.+ |.+-+|++.|++
T Consensus 142 ~l-g~~igp~l~~~l 155 (395)
T PRK10054 142 NI-GWTVGPPLGTLL 155 (395)
T ss_pred HH-HHHHHHHHHHHH
Confidence 54 777788776654
No 13
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=96.48 E-value=0.00092 Score=54.20 Aligned_cols=140 Identities=19% Similarity=0.355 Sum_probs=96.0
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
..++.+++..+++.....+... ...++++.+. +.+.+.+.+.++..++.++.+.+.+|-.|-|++-++.++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~ 77 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALP----LLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALG 77 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHH----HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHH
Confidence 3456677777776555444443 3445556675 9999999999999999999999988755444777888887777
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~r 159 (174)
.+...+. + + .+ .+.+.+++.|++.+...+... +..++|+|+...++... ..
T Consensus 78 ~~~~~~~-----~--------------~-~~----~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 132 (352)
T cd06174 78 SLLLAFA-----S--------------S-LW----LLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSA-GF 132 (352)
T ss_pred HHHHHHh-----c--------------c-HH----HHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHH-HH
Confidence 7665443 0 1 11 234567777877766554433 36778899999999876 44
Q ss_pred hhccCcchhhhhcc
Q psy10696 160 GLAFIPGPIIYGAL 173 (174)
Q Consensus 160 llg~IP~Pi~fG~~ 173 (174)
-+|.+.+|.+.|.+
T Consensus 133 ~~g~~~~~~~~~~~ 146 (352)
T cd06174 133 GLGALLGPLLGGLL 146 (352)
T ss_pred HHHHHHHHHHHHHH
Confidence 55677777776653
No 14
>KOG1330|consensus
Probab=96.45 E-value=0.0043 Score=54.83 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=99.8
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
++++|+.++++=+=...+- ....|.+.-|+.+ ++.|.+...+.+...+...+-+|++.|-||++.++.|..+-++
T Consensus 35 l~il~~vnlmny~Dr~~ia----gv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIA----GVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred HHHHHHHHHHHHhhhhhhh----hhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 5677888888777554332 3557889999999 5999999999999999999999999999999999988887776
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee----ecCCCCchhHHHHHHHHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR----CVSPEDKSLSIGITEALG 158 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~----~V~~~~sslylGi~~~~~ 158 (174)
..+...+. + .+..+.+.-.+.|+|.+-..++.-+ .-++++|+..+|+.+...
T Consensus 111 Av~~~~fs--------------------~----~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~i 166 (493)
T KOG1330|consen 111 AVFASGFS--------------------N----HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAI 166 (493)
T ss_pred HHHHHHHH--------------------H----HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhc
Confidence 55432221 1 2223456788999999998888876 567789999999999865
No 15
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.45 E-value=0.00063 Score=56.60 Aligned_cols=133 Identities=18% Similarity=0.200 Sum_probs=88.2
Q ss_pred HHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccc
Q psy10696 11 STVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTY 89 (174)
Q Consensus 11 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l 89 (174)
.++++.+.+.+.+ .+++.+++++.+. +.|.+.+.+.++..++.++.+++.+|-.|-|++-.+.++.+++.+...+
T Consensus 14 ~~~~~~~~~~~~~----~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 89 (385)
T TIGR00710 14 SILGPLGIDMYLP----AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL 89 (385)
T ss_pred HHHHHHHHHHhcc----cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 3444554443333 3456678888886 9999999999999999999999888755555667777777777765443
Q ss_pred cccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHHhhccCc
Q psy10696 90 TNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGCGLAFIP 165 (174)
Q Consensus 90 ~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~rllg~IP 165 (174)
. + + .+. +.+..++.|++.+...+.. .+..++|+|+...|+...... +|.+.
T Consensus 90 ~-----~--------------~-~~~----~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 144 (385)
T TIGR00710 90 S-----N--------------N-IET----LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLA-LAPAV 144 (385)
T ss_pred H-----c--------------c-HHH----HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH-HHHHH
Confidence 2 0 1 111 2345667777665544333 346788889999998887554 44556
Q ss_pred chhhhhc
Q psy10696 166 GPIIYGA 172 (174)
Q Consensus 166 ~Pi~fG~ 172 (174)
+|.+.|+
T Consensus 145 g~~~~~~ 151 (385)
T TIGR00710 145 APLLGGY 151 (385)
T ss_pred HHHHHHH
Confidence 6665554
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=96.34 E-value=0.0007 Score=56.51 Aligned_cols=140 Identities=9% Similarity=0.083 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
+....++.+..+..... .+ ..+++++++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|-|++-++.++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~-~~---~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 89 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFL-VA---LVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSA 89 (405)
T ss_pred HHHHHHHHHHHHHHHHH-HH---HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34555666666664332 22 33456778899986 999999999999999999999998875554555567777777
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALG 158 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~ 158 (174)
+++...+. + + .+. +.+..++.|++.+..++... +..++++|+.+.|+..+ .
T Consensus 90 ~~~~~~~~-----~--------------~-~~~----l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 144 (405)
T TIGR00891 90 GTLACGFA-----P--------------G-YIT----MFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLIS-G 144 (405)
T ss_pred HHHHHHHh-----c--------------c-HHH----HHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHH-H
Confidence 76654332 0 1 111 23456777777766655433 46788899999998776 3
Q ss_pred HhhccCcchhhhhc
Q psy10696 159 CGLAFIPGPIIYGA 172 (174)
Q Consensus 159 rllg~IP~Pi~fG~ 172 (174)
..+|.+.+|.+.+.
T Consensus 145 ~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 145 YAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHH
Confidence 44566666665543
No 17
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=96.32 E-value=0.0011 Score=57.36 Aligned_cols=116 Identities=15% Similarity=0.166 Sum_probs=83.7
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
+++.+. +.|.+.+.+.++..++.++.+++.+|-.+.|++..+.++.+++.++..+. . . ..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~-~--------------~~- 130 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWA---A-G--------------GG- 130 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHH---H-H--------------cC-
Confidence 577786 99999999999999999999999887665566677777777776553211 0 0 00
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEEee----ecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQFR----CVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lgl~----~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+ ..+++..++.|++.++.++...+ ..++++|+.+.|+.... ..+|.+.+|++.|++
T Consensus 131 --~-~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~i~~~l~~~l 190 (465)
T TIGR00894 131 --I-ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSG-FQLGTFIFLPISGWL 190 (465)
T ss_pred --c-hHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 1 12345678889998888876654 57789999999998763 445677777776654
No 18
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=96.26 E-value=0.00048 Score=60.63 Aligned_cols=141 Identities=14% Similarity=0.182 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
+...+++.++..+ .+..++...+ +++++++.+. +.+++.+.|.++.+...++.+.+.+|-.|.|++-++.+++++
T Consensus 8 ~~~~~~~~~~~~l-d~tiv~~a~p---~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 8 LVIIVLVYIPVAI-DATVLHVAAP---TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHH---HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4566677777766 4445554444 6678888885 999999999999999999999988876666677788888888
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----e-ecCCCCchhHHHHHHHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----R-CVSPEDKSLSIGITEAL 157 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~-~V~~~~sslylGi~~~~ 157 (174)
++++..+. + + .+ .++++.++.|+|.+..++... + +.++++|+.++|+....
T Consensus 84 ~~~~~~~a-----~--------------~-~~----~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~ 139 (495)
T PRK14995 84 ASLAAAFS-----P--------------T-AS----WLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAV 139 (495)
T ss_pred HHHHHHHc-----C--------------C-HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 88775432 0 1 12 124466777777765544322 2 35678999999998774
Q ss_pred HHhhccCcchhhhhcc
Q psy10696 158 GCGLAFIPGPIIYGAL 173 (174)
Q Consensus 158 ~rllg~IP~Pi~fG~~ 173 (174)
..+|..-||.+.|++
T Consensus 140 -~~~g~~~gp~lgg~l 154 (495)
T PRK14995 140 -GSGGAAFGPLVGGIL 154 (495)
T ss_pred -HHHHHHHHHHHHHHh
Confidence 445778888887765
No 19
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=96.19 E-value=0.00081 Score=56.15 Aligned_cols=121 Identities=12% Similarity=0.110 Sum_probs=81.4
Q ss_pred eeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCC
Q psy10696 27 AYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGAC 105 (174)
Q Consensus 27 ~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C 105 (174)
+.+++..++++.+. +.|.+.+.+.++.+++.++.+.+.+|-.|.|++-.+.++.+++.++..+.+
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-------------- 77 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-------------- 77 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--------------
Confidence 45567777888885 999999999999999999999988876665677778888777777654320
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcCccCc----eeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 106 PADCGSHFMWFIFILCLLNFFSATGRAGN----TIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 106 ~~~C~~~~~~f~~lf~~~q~l~g~g~tP~----~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
+ .+.+ .+..++.|++.+.. ..+..+..++|+|+...|+.+.... +|.+.+|++.|+
T Consensus 78 -----~-~~~~----~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 137 (377)
T PRK11102 78 -----T-IDQL----IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMT-IAPLLAPIIGGW 137 (377)
T ss_pred -----c-HHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1 1111 22334444444332 2233345778889999998876554 466677776654
No 20
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.18 E-value=0.0015 Score=55.24 Aligned_cols=139 Identities=12% Similarity=0.132 Sum_probs=89.8
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
+..++++.+..+++...+.+ .+++++++++.+. +.|.+.+.+.++..++.++.+.+.+|-+|.|.+..+.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMG----VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVI 80 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHh----ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHH
Confidence 45667788888887665444 4556778889885 999999999999999999999988876665566778888887
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALG 158 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~ 158 (174)
+.++..+.+ + .+. +.+..++.|++.+...+.. -+..++++|+..+|+....
T Consensus 81 ~~~l~~~~~-------------------~-~~~----l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (382)
T PRK10091 81 GNAMFTLSS-------------------S-YLM----LAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSG- 135 (382)
T ss_pred HHHHHHHhC-------------------c-HHH----HHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHH-
Confidence 776654321 0 111 1234555665544332221 2346667778788776543
Q ss_pred HhhccCcchhhhh
Q psy10696 159 CGLAFIPGPIIYG 171 (174)
Q Consensus 159 rllg~IP~Pi~fG 171 (174)
..+|...+|.+-|
T Consensus 136 ~~~g~~~g~~l~~ 148 (382)
T PRK10091 136 MTVANLLGIPLGT 148 (382)
T ss_pred HHHHHHHhccHHH
Confidence 3334444554433
No 21
>PRK03699 putative transporter; Provisional
Probab=96.14 E-value=0.0024 Score=54.22 Aligned_cols=120 Identities=13% Similarity=0.120 Sum_probs=76.3
Q ss_pred eecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCC
Q psy10696 28 YLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACP 106 (174)
Q Consensus 28 ~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~ 106 (174)
.+++++++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|.|.+-.+.++.++++++..+. +
T Consensus 29 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~-----~---------- 93 (394)
T PRK03699 29 VMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS-----H---------- 93 (394)
T ss_pred hhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-----c----------
Confidence 3456778888885 99999999999999999999998877655566667777777777665432 0
Q ss_pred CCccchhHHHHHHHHHHHHHhhcCccCcee----EEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 107 ADCGSHFMWFIFILCLLNFFSATGRAGNTI----IQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 107 ~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~----lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
+ .+.+ .+..++.|++....++ ...+..++++|+..++..+.... +|.+-+|.+.|+
T Consensus 94 ----~-~~~~----~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~ 153 (394)
T PRK03699 94 ----S-LALF----SIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFS-MAGMIFPIIAAY 153 (394)
T ss_pred ----h-HHHH----HHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1 1112 2233444444333332 22345677788888887765433 334445554443
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=96.11 E-value=0.0015 Score=55.31 Aligned_cols=122 Identities=16% Similarity=0.119 Sum_probs=83.7
Q ss_pred eeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCC
Q psy10696 26 VAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGA 104 (174)
Q Consensus 26 ~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~ 104 (174)
.+.+++++++++.+. +.|.+.+.+.++..++..+.++..+|-.|-|++-.+.++.+++++...+.
T Consensus 29 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------------- 94 (390)
T PRK03545 29 VGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA-------------- 94 (390)
T ss_pred HcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh--------------
Confidence 345677889999996 99999999999999999999988887666667777788888877655432
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhcCccCcee----EEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 105 CPADCGSHFMWFIFILCLLNFFSATGRAGNTI----IQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 105 C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~----lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
++.+. +.+..++.|++.+..++ +..+..++|+|+.++|+... ...+|...+|.+.|.
T Consensus 95 ------~~~~~----l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~-~~~~g~~ig~~l~~~ 155 (390)
T PRK03545 95 ------WNFTV----LLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLAT-GTALAMVLGLPLGRV 155 (390)
T ss_pred ------ccHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHH-HHHHHHHHHhhHHHH
Confidence 01111 12345566666544333 22346788999999998765 344456666665543
No 23
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=96.11 E-value=0.0021 Score=54.82 Aligned_cols=131 Identities=15% Similarity=0.172 Sum_probs=96.5
Q ss_pred hhHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhh
Q psy10696 2 FSVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIM 80 (174)
Q Consensus 2 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~ 80 (174)
++...++....+.|+-....+....+.+++++++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|.|-+-.+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~ 84 (393)
T PRK09705 5 FPLNFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLI 84 (393)
T ss_pred cchHHHHHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHH
Confidence 456677777777777666555666678889999999996 9999999999999999999999988755555667888888
Q ss_pred hhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee---ecCCCCchhHHHHHHH
Q psy10696 81 SIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR---CVSPEDKSLSIGITEA 156 (174)
Q Consensus 81 ~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~---~V~~~~sslylGi~~~ 156 (174)
+++.+...+.+ + .+ .+.++.++.|+|.+..++.... ...||+|+.+.|+...
T Consensus 85 ~~~~~~~~~a~-------------------~-~~----~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 139 (393)
T PRK09705 85 AVGALMRELYP-------------------Q-SA----LLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSA 139 (393)
T ss_pred HHHHHHHHHCc-------------------c-hH----HHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHH
Confidence 88887665431 1 11 1245688888888776654432 1234778999988765
No 24
>PRK03633 putative MFS family transporter protein; Provisional
Probab=96.07 E-value=0.00092 Score=56.45 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=93.6
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhh
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~ 81 (174)
++..++.++++.++..+...++...+. ++++.|. +.|++.+.+.++..++.++.+.+.+|-.|.|.+..+.++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~----~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWL----AQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHH----HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888888887666655544444 4567774 99999999999999999999998887666666777888888
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~ 157 (174)
++++...+.+ + .+. +.+..++.|++.+..++.. .+..++++|+.++|.....
T Consensus 83 ~~~~~~~~~~-------------------~-~~~----l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (381)
T PRK03633 83 AGCAGLGLMV-------------------G-FWS----WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMV 138 (381)
T ss_pred HHHHHHHHhc-------------------c-HHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 7776544320 1 111 2234556666655443322 2346677788888876643
Q ss_pred HHhhccCcchhhhhc
Q psy10696 158 GCGLAFIPGPIIYGA 172 (174)
Q Consensus 158 ~rllg~IP~Pi~fG~ 172 (174)
.-+|..-||.+.+.
T Consensus 139 -~~~g~~~g~~~~~~ 152 (381)
T PRK03633 139 -YYLGTVLGQLLVSK 152 (381)
T ss_pred -HHHHHHHHHHHHhc
Confidence 44466666666554
No 25
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=95.99 E-value=0.00071 Score=55.30 Aligned_cols=138 Identities=20% Similarity=0.325 Sum_probs=93.1
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccc
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFL 86 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l 86 (174)
+++.++.+++.+.+.+.... .+.++++.+. +.|.+.+.+.++..++.++.+++.+|-.|-|++-++.++.++++++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPL---YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHH---HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHH
Confidence 45566666655443332221 4467788775 9999999999999999999999987743333667888888887555
Q ss_pred ccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHHhhc
Q psy10696 87 RTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGCGLA 162 (174)
Q Consensus 87 ~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~rllg 162 (174)
..+. + + .+ .+++..++.|++.+...+.. .+..++|+|+.++|+... ..-+|
T Consensus 79 ~~~~-----~--------------~-~~----~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~g 133 (352)
T PF07690_consen 79 LAFA-----S--------------N-FW----LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSA-GFSLG 133 (352)
T ss_dssp HHHH-----C--------------C-HH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHH-HHHHH
T ss_pred hhhh-----h--------------h-HH----HHhhhccccccccccccccccccccccchhhhhhhccccccc-hhhhh
Confidence 4431 1 1 11 23456777777765555444 346888999999999887 55556
Q ss_pred cCcchhhhhcc
Q psy10696 163 FIPGPIIYGAL 173 (174)
Q Consensus 163 ~IP~Pi~fG~~ 173 (174)
.+.+|++.|.+
T Consensus 134 ~~~g~~l~~~l 144 (352)
T PF07690_consen 134 SILGPLLGGFL 144 (352)
T ss_dssp HHHHHHHHHHC
T ss_pred hhcccchhhhh
Confidence 77788777654
No 26
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=95.98 E-value=0.0044 Score=53.78 Aligned_cols=120 Identities=12% Similarity=0.125 Sum_probs=77.2
Q ss_pred ccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccc
Q psy10696 33 VRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGS 111 (174)
Q Consensus 33 ~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~ 111 (174)
+++ +.+. +.|.+.+.+-++.+++.++.+++.+|-.+.|++-++.++.++++++..+.+.. . +
T Consensus 56 ~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~--~--------------~ 118 (452)
T PRK11273 56 VEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA--T--------------S 118 (452)
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc--c--------------c
Confidence 344 7775 99999999999999999999999988666667778888888888766553110 0 0
Q ss_pred hhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhh
Q psy10696 112 HFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPII 169 (174)
Q Consensus 112 ~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~ 169 (174)
+.+..+...++.-+..+....+......+..++|+|+.++|+......+-+.+.+|++
T Consensus 119 ~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred cHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 1111222222222334433333333334567888999999997765555555555653
No 27
>PRK12382 putative transporter; Provisional
Probab=95.97 E-value=0.0026 Score=53.71 Aligned_cols=146 Identities=8% Similarity=-0.040 Sum_probs=86.9
Q ss_pred HHHHHHHHhhcccccccceeeeeecc-cccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDD-NVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
.+.++.++..++.+...+ .+.. ++++++.+. +.|.+.+.+.++..+..++.+++.+|-.|-|.+-.+.+..+++
T Consensus 19 ~~~~~~~~~~~~~~~~~p----~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 19 RIAFAVFLTYMTVGLPLP----VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHHHHhh----hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 344455555554333333 3322 356788885 9999999999999999999999988754444445555555544
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~r 159 (174)
++...+....... ... .+ ..+.++.++.|++.+...+.. .+.+++|+|+.++|+..+ ..
T Consensus 95 ~~~~~~~~~~~~~------------~~~---~~-~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~-~~ 157 (392)
T PRK12382 95 GLAYLLAAILPVS------------APF---KF-ALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGM-AM 157 (392)
T ss_pred HHHHHhhhccccc------------hhH---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHH-HH
Confidence 4322211000000 001 11 123467788888877655433 346889999999998764 34
Q ss_pred hhccCcchhhhhc
Q psy10696 160 GLAFIPGPIIYGA 172 (174)
Q Consensus 160 llg~IP~Pi~fG~ 172 (174)
-+|...+|.+.|+
T Consensus 158 ~~g~~~g~~~~~~ 170 (392)
T PRK12382 158 YGALAAGAPLGLL 170 (392)
T ss_pred HHHHHHHHHHHHH
Confidence 4455666665543
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=95.95 E-value=0.00067 Score=55.61 Aligned_cols=144 Identities=16% Similarity=0.108 Sum_probs=87.9
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
.+++++++.+++.+........+.+ +++.+ .+.|.+.+.+.++.+++.++.+.+.+|-.|-|.+-++.++.+++.
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~ 78 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL----AGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLV 78 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH----HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHH
Confidence 3567777777766655444433443 34556 499999999999999999999998887555445555666666555
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCcc----CceeEEeeecCCCCchhHHHHHHHHHHh
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRA----GNTIIQFRCVSPEDKSLSIGITEALGCG 160 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~t----P~~~lgl~~V~~~~sslylGi~~~~~rl 160 (174)
+...+.+.. + +.+.+.+. +..++.|++.+ +...+..+.+++|+|+.+.|+... ..-
T Consensus 79 ~~~~~~~~~--~-------------~~~~~~~~----~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 138 (365)
T TIGR00900 79 AVLPFVALL--G-------------GLNIWQVY----VLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQA-VRS 138 (365)
T ss_pred HHHHHHHHc--C-------------CCcHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHH-HHH
Confidence 544332100 0 01122222 23334444433 333444457888999999998877 445
Q ss_pred hccCcchhhhhcc
Q psy10696 161 LAFIPGPIIYGAL 173 (174)
Q Consensus 161 lg~IP~Pi~fG~~ 173 (174)
+|.+.+|.+.|++
T Consensus 139 ~g~~~g~~l~~~l 151 (365)
T TIGR00900 139 LFYIVGPGIGGLM 151 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 5667777766543
No 29
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=95.88 E-value=0.002 Score=54.94 Aligned_cols=145 Identities=10% Similarity=-0.025 Sum_probs=89.6
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
....+++++..++.+..++...++ .++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|.|++-.+.++.+++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~----~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 16 LWGYIGVVVFMTGDGLEQGWLSPF----LKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHH----HHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 345566667666665444433333 34567775 9999999999999999999999988766666767777777776
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeE----EeeecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTII----QFRCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~l----gl~~V~~~~sslylGi~~~~~r 159 (174)
.+...+... + ..+.+.+ .+..++.|+|....... ..+.+++|+|+.+.|+..+...
T Consensus 92 ~~~~~~~~~-~---------------~~~~~~l----~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 151 (402)
T TIGR00897 92 HAAFIVFGL-G---------------HANYPLI----LLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYS 151 (402)
T ss_pred HHHHHHHhc-c---------------CccHHHH----HHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 554322100 0 0111111 22344556665443322 2346789999999999887654
Q ss_pred hhccCcchhhhhcc
Q psy10696 160 GLAFIPGPIIYGAL 173 (174)
Q Consensus 160 llg~IP~Pi~fG~~ 173 (174)
+-..+-+|++.|++
T Consensus 152 ~g~~~~g~~~~~~l 165 (402)
T TIGR00897 152 IGIGVFGSYYSSYA 165 (402)
T ss_pred HHHHHHHHHHHHhc
Confidence 32234566655543
No 30
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=95.83 E-value=0.0011 Score=57.89 Aligned_cols=121 Identities=9% Similarity=0.015 Sum_probs=78.5
Q ss_pred ecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCC
Q psy10696 29 LDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPA 107 (174)
Q Consensus 29 i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~ 107 (174)
+++++++++.+. +.|.+.+.+.++.+++.++.+++.+|-.+.|.+..+.++.+++.+...+- .|..
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~----------- 118 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGAS--LGSG----------- 118 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHH--Hhcc-----------
Confidence 346678899986 99999999999999999999999987666666678888777776655432 1110
Q ss_pred CccchhHHHHHHHHHHHHHhhcCccCce----eEEeeecCCCCchhHHHHHHHHHHhhccCcchhh
Q psy10696 108 DCGSHFMWFIFILCLLNFFSATGRAGNT----IIQFRCVSPEDKSLSIGITEALGCGLAFIPGPII 169 (174)
Q Consensus 108 ~C~~~~~~f~~lf~~~q~l~g~g~tP~~----~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~ 169 (174)
. ++.+.+ .+..++.|++.+... .+.-+..++++|+.++|+.... .-+|.+.+|++
T Consensus 119 -~-~~~~~l----~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~-~~lG~~l~~~i 177 (467)
T PRK09556 119 -S-VSLGLM----IALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNIS-HNLGGAGAGGV 177 (467)
T ss_pred -c-chHHHH----HHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecc-cchhhhHHHHH
Confidence 0 111212 223444555444433 3333468899999999987653 33344444443
No 31
>TIGR00895 2A0115 benzoate transport.
Probab=95.73 E-value=0.0019 Score=53.60 Aligned_cols=138 Identities=14% Similarity=0.129 Sum_probs=88.9
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~ 85 (174)
.++..+..+..... ++. +...+.++++.+. +.|.+.+.+.++..++.++.+++.+|-.|-|++-.+.++.+++.+
T Consensus 22 ~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 97 (398)
T TIGR00895 22 SFLIMLMDGYDLAA-MGF---AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTL 97 (398)
T ss_pred HHHHHHHHHHHHHH-HHh---hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 34455555553332 222 2334456778885 999999999999999999999988875555566677777777665
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHHhh
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGCGL 161 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~rll 161 (174)
+..+. + + .+ .+.+..++.|++.+..++... +..++++|+.+.|+... ..-+
T Consensus 98 ~~~~~-----~--------------~-~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~ 152 (398)
T TIGR00895 98 LCALA-----T--------------N-VT----QLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFC-GYPI 152 (398)
T ss_pred HHHHc-----c--------------c-hH----HHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhh-HHHH
Confidence 54432 0 1 11 123456777777766555443 35777889999998765 4445
Q ss_pred ccCcchhhhhcc
Q psy10696 162 AFIPGPIIYGAL 173 (174)
Q Consensus 162 g~IP~Pi~fG~~ 173 (174)
|.+.+|.+.|++
T Consensus 153 g~~~~~~~~~~l 164 (398)
T TIGR00895 153 GAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHHHH
Confidence 666677766553
No 32
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=95.71 E-value=0.0052 Score=53.74 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=95.5
Q ss_pred ccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccc
Q psy10696 33 VRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGS 111 (174)
Q Consensus 33 ~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~ 111 (174)
.+...++. |+|++.+++.++..++=.+.+++.+|.|-.++++.|.++.|+-.+++.+.+
T Consensus 56 ~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~-------------------- 115 (448)
T COG2271 56 IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP-------------------- 115 (448)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh--------------------
Confidence 44555775 999999999999999999999999976655588999999999888776652
Q ss_pred hhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhh
Q psy10696 112 HFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPII 169 (174)
Q Consensus 112 ~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~ 169 (174)
+...+..+..+--+++|+|..|..-.....-++++|+.+.++=++.-++=|.++.|+.
T Consensus 116 s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 116 SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 3456777777889999999999887777778899999999998886677677766654
No 33
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=95.66 E-value=0.0017 Score=53.70 Aligned_cols=146 Identities=11% Similarity=-0.014 Sum_probs=83.7
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~ 85 (174)
.....+++........+....++. ++++.+. +.+.+.+...++..++..+.++..+|-.|.|++-.+..+..+.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (394)
T TIGR00883 224 GLGLVIATTTTFYLITTYLPTYLT---QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAV 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 344444444444333344444442 3455664 888888888999999988888887764444443322222222221
Q ss_pred --cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhcc
Q psy10696 86 --LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAF 163 (174)
Q Consensus 86 --l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~ 163 (174)
...+. .+ +..+.+....++..+..+....+......+.+|+++|+.+.|+.+.+.+..|.
T Consensus 301 ~~~~~~~----~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 301 PLLMALL----DS--------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG 362 (394)
T ss_pred HHHHHHh----cC--------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh
Confidence 11111 00 01122222223333444444555555555678999999999998778888899
Q ss_pred Ccchhhhhcc
Q psy10696 164 IPGPIIYGAL 173 (174)
Q Consensus 164 IP~Pi~fG~~ 173 (174)
..+|.+.|++
T Consensus 363 ~~~p~~~g~l 372 (394)
T TIGR00883 363 GFAPYIAAAL 372 (394)
T ss_pred hHHHHHHHHH
Confidence 9999998875
No 34
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=95.62 E-value=0.0029 Score=51.29 Aligned_cols=144 Identities=18% Similarity=0.298 Sum_probs=89.3
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcce-eeeehhhhhhhh
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTK-WVALGSIIMSIG 83 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~pr-wig~g~l~~~~g 83 (174)
.+++..+++..+.+.+......+.+| +++.+. +.+.+.+...++..++..+.+.+.+|.+|.+ .+-++.++..++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 179 LLALAFFLLSFGYYGLLTYLPLYLQE---VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 44555666666666666655555532 335564 9999999999999999999988776644434 555666666666
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhcc
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAF 163 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~ 163 (174)
.+.....+ + .+......++..+..+...........+.+|+|+|+...|+.... +-+|.
T Consensus 256 ~~~~~~~~-------------------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 314 (352)
T cd06174 256 LLLLALAP-------------------S-LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF-GSLGG 314 (352)
T ss_pred HHHHHHhc-------------------c-HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH-HHHHH
Confidence 55443321 0 111222222233333333344444445678889999999998874 45566
Q ss_pred Ccchhhhhcc
Q psy10696 164 IPGPIIYGAL 173 (174)
Q Consensus 164 IP~Pi~fG~~ 173 (174)
..+|.+.|.+
T Consensus 315 ~i~~~i~g~l 324 (352)
T cd06174 315 ALGPLLAGLL 324 (352)
T ss_pred HHHHHHHHHH
Confidence 7788887764
No 35
>TIGR00893 2A0114 d-galactonate transporter.
Probab=95.58 E-value=0.0027 Score=52.18 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=80.8
Q ss_pred ccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCc
Q psy10696 31 DNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADC 109 (174)
Q Consensus 31 ~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C 109 (174)
+.+++++.+. +.|.+.+.+.++..++.++.+++.+|-.|-|++-++.++.+++.++..+.+
T Consensus 19 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~------------------ 80 (399)
T TIGR00893 19 MLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG------------------ 80 (399)
T ss_pred HHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc------------------
Confidence 3567788886 999999999999999999999998876665667777777777776654431
Q ss_pred cchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 110 GSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 110 ~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
+ .+. +.+..++.|++.+...+.. .+..|+|+|+.+.|+.... .-+|.+.+|.+.|+
T Consensus 81 -~-~~~----~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~ 140 (399)
T TIGR00893 81 -A-YVS----LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSA-QGLGGIIGGPLVGW 140 (399)
T ss_pred -C-HHH----HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 1 111 2345566666655544433 3457788899999987764 44456666666554
No 36
>TIGR00898 2A0119 cation transport protein.
Probab=95.56 E-value=0.009 Score=52.20 Aligned_cols=118 Identities=13% Similarity=0.250 Sum_probs=81.9
Q ss_pred eecccccCCCch---h-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccC
Q psy10696 28 YLDDNVRKNKMP---V-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQG 103 (174)
Q Consensus 28 ~i~~~~~~~~~s---~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~ 103 (174)
+.++++++++++ . +.|.+.+.+.+|.+++.++.+++.+|-.|-|++-++.++.+++++...+.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~------------- 177 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS------------- 177 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-------------
Confidence 445678899997 5 99999999999999999999999887555455666777777776654432
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHHhhccCcchhhh
Q psy10696 104 ACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGCGLAFIPGPIIY 170 (174)
Q Consensus 104 ~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~rllg~IP~Pi~f 170 (174)
++.+. +.+..++.|++.+..++.. .+.+++++|+.+.++... .-.+|.+.+|++-
T Consensus 178 -------~~~~~----~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~ 236 (505)
T TIGR00898 178 -------PNYTV----FLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQV-FFSLGLVLLPLVA 236 (505)
T ss_pred -------ccHHH----HHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHH-HHHHHHHHHHHHH
Confidence 01121 2345666777776655433 457888999998888743 4455666666553
No 37
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=95.49 E-value=0.002 Score=52.80 Aligned_cols=118 Identities=17% Similarity=0.168 Sum_probs=73.8
Q ss_pred CCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhH
Q psy10696 36 NKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFM 114 (174)
Q Consensus 36 ~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~ 114 (174)
++.+. +.|.+.+.+.++..++..+.++..+|.+|.+++..+.+..+++.+...+.+ + + .+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~-~~ 302 (365)
T TIGR00900 242 LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP----------------P--N-FP 302 (365)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc----------------h--h-HH
Confidence 56665 899999999999999999988877765555555555555555554433220 0 0 12
Q ss_pred HHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 115 WFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 115 ~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
.+....++.-+..+....+..+...+.+|+|+|+.+.|+...+.++ |...+|.+.|++
T Consensus 303 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l 360 (365)
T TIGR00900 303 LFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 2221111222222333333344445678999999999999987664 677788888875
No 38
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=95.41 E-value=0.0043 Score=53.57 Aligned_cols=142 Identities=18% Similarity=0.247 Sum_probs=86.6
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccc
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFL 86 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l 86 (174)
++..++.+++..+...+...++. +.++.+. +.|.+.....++..++.++.+++.+|.+|-+++.+|.++.+++.++
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~---~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~ 337 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQ---QVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYW 337 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHH
Confidence 34444444443333333334443 3455665 9999999999999999999988876644434556777777777766
Q ss_pred ccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcC----ccCceeEEeeecCCCCchhHHHHHHHHHHhhc
Q psy10696 87 RTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATG----RAGNTIIQFRCVSPEDKSLSIGITEALGCGLA 162 (174)
Q Consensus 87 ~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g----~tP~~~lgl~~V~~~~sslylGi~~~~~rllg 162 (174)
..+.. +. +...+... ..+++.|+| ..|......+.+++++++.+.|+..+ .|-+|
T Consensus 338 ~~~~~----~~------------~~~~~~~~----~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g 396 (485)
T TIGR00711 338 RAFTF----TP------------DTPFLAIA----LPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNF-TRQLG 396 (485)
T ss_pred HhccC----CC------------CCCHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHH-HHHHH
Confidence 54320 00 01011111 123333333 34555555667899999999999887 46788
Q ss_pred cCcchhhhhcc
Q psy10696 163 FIPGPIIYGAL 173 (174)
Q Consensus 163 ~IP~Pi~fG~~ 173 (174)
...||.+.|.+
T Consensus 397 ~~ig~~i~g~~ 407 (485)
T TIGR00711 397 GSIGTALITTI 407 (485)
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 39
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=95.40 E-value=0.0035 Score=53.53 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=82.7
Q ss_pred eecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCC
Q psy10696 28 YLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACP 106 (174)
Q Consensus 28 ~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~ 106 (174)
.+.+++++++.+. +.|...+.+.++..++.++.+.+.+|-+|.|.+-.+.++.+++.+...+.
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---------------- 105 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA---------------- 105 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 4556778888885 99999999999999999999999888666666677777777766554332
Q ss_pred CCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 107 ADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 107 ~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
++.+. +.+..++.|++....++... +.+++|+|+.++|+.+.... +|.+-+|++.++
T Consensus 106 ----~~~~~----l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~-~g~~ig~~l~~~ 166 (394)
T PRK10213 106 ----NSFSL----LLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVS-IALVIAAPLGSF 166 (394)
T ss_pred ----ChHHH----HHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 01121 23455666666654444332 46888999999999887443 566666666554
No 40
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=95.25 E-value=0.0028 Score=54.23 Aligned_cols=141 Identities=11% Similarity=0.110 Sum_probs=92.0
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
.+++..++++..+....+++...++ +++.+.+. +.|.+.+.+.+...+..++.+.+.+|-.|-|.+-.+.++.+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~ 89 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRF---VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAG 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHH
Confidence 4567888888888777777665544 45667775 9999999999999888888888777643333445667777766
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccC----ceeEEeeecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAG----NTIIQFRCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP----~~~lgl~~V~~~~sslylGi~~~~~r 159 (174)
.+...+. ++.+.. .+..++.|++.+. ..++..+.+++|+++.+.|+... ..
T Consensus 90 ~~~~~~~--------------------~~~~~l----~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~ 144 (400)
T PRK11646 90 FATMAIA--------------------HEPWLL----WLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMM-QD 144 (400)
T ss_pred HHHHHHh--------------------ccHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH-HH
Confidence 6654332 011211 2234444544432 23333456788999999999876 45
Q ss_pred hhccCcchhhhhcc
Q psy10696 160 GLAFIPGPIIYGAL 173 (174)
Q Consensus 160 llg~IP~Pi~fG~~ 173 (174)
-+|.+.||.+.|++
T Consensus 145 ~~g~~ig~~l~g~l 158 (400)
T PRK11646 145 SAGAVIGALLGSWL 158 (400)
T ss_pred HHHHHHHHHHHHHH
Confidence 55677788777654
No 41
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=95.24 E-value=0.0073 Score=51.07 Aligned_cols=109 Identities=12% Similarity=0.105 Sum_probs=77.1
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHH
Q psy10696 40 VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFI 119 (174)
Q Consensus 40 ~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~l 119 (174)
.+.|.+.+.+.++..++.++.+++.+|-.|.|++.++.++.++++++..+... ..+ + ..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~----------------~~~----~-~~ 129 (481)
T TIGR00879 71 SLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF----------------ALS----V-EM 129 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc----------------ccc----h-HH
Confidence 49999999999999999999999988866666777888888887776644200 001 1 12
Q ss_pred HHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHHhhccCcchhhh
Q psy10696 120 LCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGCGLAFIPGPIIY 170 (174)
Q Consensus 120 f~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~rllg~IP~Pi~f 170 (174)
+.++.++.|+|.+..++... +..++++|+.++|+.... ..+|.+.+|.+-
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~~~~~~ 183 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLA-ITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHH-HHHHHHHHHHHH
Confidence 34577888888777666553 357888999999987654 345555555543
No 42
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=95.12 E-value=0.003 Score=51.93 Aligned_cols=112 Identities=11% Similarity=0.056 Sum_probs=76.4
Q ss_pred ccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCc
Q psy10696 31 DNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADC 109 (174)
Q Consensus 31 ~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C 109 (174)
.++++++.+. +.|.+.+.+.++..++.++.+.+.+|-+|.|++-++.++.+++.++..+.+
T Consensus 20 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~------------------ 81 (379)
T TIGR00881 20 YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST------------------ 81 (379)
T ss_pred HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh------------------
Confidence 3456778885 999999999999999999999998875555566788888888777654421
Q ss_pred cchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHHhhccCcch
Q psy10696 110 GSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGCGLAFIPGP 167 (174)
Q Consensus 110 ~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~rllg~IP~P 167 (174)
+.+. +.+..++.|++.+..++... +.+++|+|+.+.|+.... ..+|.+.+|
T Consensus 82 --~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~ 136 (379)
T TIGR00881 82 --SLWV----MAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCS-HNVGGGLLP 136 (379)
T ss_pred --hHHH----HHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhcc-chhHHHHHH
Confidence 1121 23455666666555544443 357788888888877653 344555555
No 43
>PRK03893 putative sialic acid transporter; Provisional
Probab=95.08 E-value=0.0022 Score=55.77 Aligned_cols=140 Identities=10% Similarity=0.090 Sum_probs=90.9
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
...+++.++.++..+.. + ..++.+.++++.+. +.+.+.+.+.++..++.++.+.+.+|-.|-|++-++.++.+++
T Consensus 23 ~~~~~~~~~~~~~~~~~-~---~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 98 (496)
T PRK03893 23 SAAWLGYLLDGFDFVLI-T---LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVG 98 (496)
T ss_pred HHHHHHHHHHHHHHHHH-H---HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34556666666643322 2 33456667888886 9999999999999999999998887654444566777777777
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCcee----EEeeecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTI----IQFRCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~----lgl~~V~~~~sslylGi~~~~~r 159 (174)
++...+. ++.+. +.+..++.|++.+..+. +..++.++|+|+.+.|+.... .
T Consensus 99 ~~~~~~~--------------------~~~~~----l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~ 153 (496)
T PRK03893 99 TLACGFA--------------------PGYWT----LFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISG-F 153 (496)
T ss_pred HHHHHHH--------------------hHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH-H
Confidence 7665542 01111 23345566665544332 334568888899988888764 3
Q ss_pred hhccCcchhhhhcc
Q psy10696 160 GLAFIPGPIIYGAL 173 (174)
Q Consensus 160 llg~IP~Pi~fG~~ 173 (174)
-+|.+.+|.+.+++
T Consensus 154 ~~g~~~~~~~~~~l 167 (496)
T PRK03893 154 SIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHHHHH
Confidence 45677777776643
No 44
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=95.05 E-value=0.0062 Score=50.49 Aligned_cols=77 Identities=10% Similarity=0.210 Sum_probs=53.5
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC-Ccceeeeehhhhhhhhcc
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG-HKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~-~~prwig~g~l~~~~g~~ 85 (174)
.+..++++++.+...+....++ +++++.+. +.|.+.+.+.+...+...+.+.+.+|. +|.+++-.+.+..+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l---~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~ 79 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFL---SEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACL 79 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHH---HcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH
Confidence 4567788887776666555544 56778885 999999999999998888888887764 344455445555455544
Q ss_pred cc
Q psy10696 86 LR 87 (174)
Q Consensus 86 l~ 87 (174)
+.
T Consensus 80 ~~ 81 (375)
T TIGR00899 80 LF 81 (375)
T ss_pred HH
Confidence 43
No 45
>PRK10489 enterobactin exporter EntS; Provisional
Probab=94.89 E-value=0.012 Score=50.26 Aligned_cols=118 Identities=15% Similarity=0.096 Sum_probs=72.9
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
.++.+. +.|.+.+.+.++..++.++..+..+|.++.|++..+.+..+++.++..+. + +..
T Consensus 253 ~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~--------------~~~ 313 (417)
T PRK10489 253 VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM-----P--------------MWI 313 (417)
T ss_pred ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-----c--------------hHH
Confidence 356664 89999999999999999988887765444455666666666655443322 0 100
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
......++.+ +..+......+++..+.+|++.|+.+.|+... ..-+|...||.+.|++
T Consensus 314 ~~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~-~~~~g~~~g~~l~G~l 371 (417)
T PRK10489 314 LAVLCLALFG-YLSAISSLLQYTLLQTQTPDEMLGRINGLWTA-QNVTGDAIGAALLGGL 371 (417)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH-HHhhhHhHHHHHHHHH
Confidence 1111111111 22222222333444557888889999999876 4556888899998875
No 46
>PRK10489 enterobactin exporter EntS; Provisional
Probab=94.87 E-value=0.014 Score=49.72 Aligned_cols=148 Identities=14% Similarity=0.118 Sum_probs=88.8
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
.+++++++..++.+.... ..+.+ .++.+.+ .+.|.+.+.+.++..++.++.+.+.+|-+|.|.+-.+.++.+++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~ 96 (417)
T PRK10489 21 AVFIARFISIFGLGLLGV-AVPVQ---IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGF 96 (417)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHH---HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHH
Confidence 345566666665443333 22322 2333345 499999999999999999999998888666677777777776665
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccC
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFI 164 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~I 164 (174)
+...+..-. . . +..+.+....++..+..+....+......+.+++++++.+.++... ..-+|.+
T Consensus 97 ~~~~~~~~~--~------------~-~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~ 160 (417)
T PRK10489 97 IGLALNAFL--P------------E-PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITML-TVRLGSV 160 (417)
T ss_pred HHHHHHHHc--C------------C-CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHH-HHhHHHH
Confidence 543321000 0 0 1112222222222233444445555566678889999999988765 4556677
Q ss_pred cchhhhhcc
Q psy10696 165 PGPIIYGAL 173 (174)
Q Consensus 165 P~Pi~fG~~ 173 (174)
-||.+.|++
T Consensus 161 ~g~~l~g~l 169 (417)
T PRK10489 161 ISPALGGLL 169 (417)
T ss_pred hHHHHHHHH
Confidence 788776654
No 47
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=94.80 E-value=0.046 Score=47.17 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=81.5
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~ 85 (174)
+.+.+....+....+. ...+++.| .+.+. +.|.+.+.+.++..++.++.+.+.+|-+|-|++-.+.++.+++++
T Consensus 32 ~~~~~~~~~~~~~~~~-~~~p~~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~ 106 (438)
T TIGR00712 32 IFFGYAAYYLVRKNFA-LAMPYLVE----QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVML 106 (438)
T ss_pred HHHHHHHHHHHhccHH-hhhHHHHH----cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHH
Confidence 3344444444333222 23344433 36775 999999999999999999999998886665677788888888877
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCc
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIP 165 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP 165 (174)
...+.+.. . ++........++..+..|....+......+..++++|+.+.|+.+....+ |..-
T Consensus 107 ~~~~~~~~---------------~-~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~~ 169 (438)
T TIGR00712 107 LMGFVPWA---------------T-SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI-GGGI 169 (438)
T ss_pred HHhccccc---------------c-chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh-HhHH
Confidence 65432100 0 11111111111222223333233333334568899999999998775554 4444
Q ss_pred chhh
Q psy10696 166 GPII 169 (174)
Q Consensus 166 ~Pi~ 169 (174)
+|.+
T Consensus 170 ~~~l 173 (438)
T TIGR00712 170 PPLL 173 (438)
T ss_pred HHHH
Confidence 4433
No 48
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=94.77 E-value=0.0091 Score=52.05 Aligned_cols=140 Identities=12% Similarity=0.137 Sum_probs=81.6
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC-Ccce---eeeehhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG-HKTK---WVALGSII 79 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~-~~pr---wig~g~l~ 79 (174)
.+.++..++.+++.....+...+|++| ++.+. +.|.+.+...++..++..+.+.+.+|. .|+| .++.+.+.
T Consensus 244 ~~~~~~~~l~~~~~~~~~~~l~~~~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKD----KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 344555666666555555544555543 35664 999999999999998888888877652 2333 23344444
Q ss_pred hhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCcc----CceeEEeeecCCCCchhHHHHHH
Q psy10696 80 MSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRA----GNTIIQFRCVSPEDKSLSIGITE 155 (174)
Q Consensus 80 ~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~t----P~~~lgl~~V~~~~sslylGi~~ 155 (174)
.+++.++..+. ++.+.+ .+..++.|++.. +.+.+..+.+++++++.+.|+..
T Consensus 320 ~~l~~ll~~~~--------------------~~~~~~----~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~ 375 (455)
T TIGR00892 320 NGLTHLLCALA--------------------GDYTGL----VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVT 375 (455)
T ss_pred HHHHHHHHHHh--------------------chHHHH----HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHH
Confidence 44433322111 011111 122333333332 33334445688899999999987
Q ss_pred HHHHhhccCcchhhhhcc
Q psy10696 156 ALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 156 ~~~rllg~IP~Pi~fG~~ 173 (174)
.. .-+|.+.||.+.|++
T Consensus 376 ~~-~~lg~~igp~i~G~l 392 (455)
T TIGR00892 376 IV-ECCAVLIGPPLAGRL 392 (455)
T ss_pred HH-HHHHHHccccceeee
Confidence 75 456888899988875
No 49
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=94.71 E-value=0.0068 Score=52.80 Aligned_cols=146 Identities=12% Similarity=0.059 Sum_probs=81.6
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccc
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFL 86 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l 86 (174)
++..+++.....++......|+. +.++.+. +.+.+.+...++..++.++.+++.+|-.|.|++-.+.....++...
T Consensus 264 ~~~~~~~~~~~~~~~~~~p~yl~---~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~ 340 (467)
T PRK09556 264 CFANIFLYIVRIGIDNWSPVYAF---QELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL 340 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH
Confidence 34444444444444444445663 3566775 8889999999999999999999887633323332222121122111
Q ss_pred ccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcc
Q psy10696 87 RTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPG 166 (174)
Q Consensus 87 ~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~ 166 (174)
..+. . . ++....+..++.++....+. ..+......+.+|+++++.+.|+...+..+.|...+
T Consensus 341 ~~~~---~-~-------------~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~ 402 (467)
T PRK09556 341 GVYQ---H-A-------------TSEYMYLASLFALGFLVFGP-QLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFA 402 (467)
T ss_pred HHHH---h-c-------------CcHHHHHHHHHHHHHHHhhH-HHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHH
Confidence 1111 0 0 01111223333333221111 111112233678999999999999998898898999
Q ss_pred hhhhhccC
Q psy10696 167 PIIYGALL 174 (174)
Q Consensus 167 Pi~fG~~i 174 (174)
|.+.|+++
T Consensus 403 ~~~~G~i~ 410 (467)
T PRK09556 403 KVGLGMIA 410 (467)
T ss_pred hhhHHHHh
Confidence 99999863
No 50
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=94.65 E-value=0.009 Score=50.70 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=89.0
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhh
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~ 81 (174)
..+.+.+.+++..++.+.+.+. +.++.++++.+. +.+...+.+.++..++..+.+++.+|-+|-|++-++.++.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 89 (406)
T PRK15402 14 FPLCLVLFEFATYIANDMIQPG----MLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFI 89 (406)
T ss_pred HHHHHHHHHHHHHhhhhhHhcc----hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 4566777788777766655543 334567788885 99999999999999999999999887655566667777777
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~ 157 (174)
++++...+. + + .+ .+.+..++.|++.+...+... +..+++++....++....
T Consensus 90 ~~~~~~~~~-----~--------------~-~~----~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 145 (406)
T PRK15402 90 LTCLAILLA-----Q--------------S-IE----QFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANV 145 (406)
T ss_pred HHHHHHHHH-----c--------------c-HH----HHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHH
Confidence 776654332 0 0 11 122345555655544333222 346777777777766553
Q ss_pred HHhhccCcchhhhhc
Q psy10696 158 GCGLAFIPGPIIYGA 172 (174)
Q Consensus 158 ~rllg~IP~Pi~fG~ 172 (174)
. .+|.+.+|.+.++
T Consensus 146 ~-~~~~~~g~~i~~~ 159 (406)
T PRK15402 146 A-LLAPLLGPLVGAA 159 (406)
T ss_pred H-HHHHHHHHHHHHH
Confidence 3 2455556665443
No 51
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=94.64 E-value=0.0067 Score=51.17 Aligned_cols=121 Identities=11% Similarity=0.175 Sum_probs=80.9
Q ss_pred eeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCC
Q psy10696 27 AYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGAC 105 (174)
Q Consensus 27 ~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C 105 (174)
+.+.++.++++.+. +.+.+.+.+.++..++.++.+.+.+|-.|-|++-.+.++.+++.+...+.+
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~-------------- 89 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE-------------- 89 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC--------------
Confidence 34567778888885 999999999999999999999988875554566677777777766544320
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 106 PADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 106 ~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
+ .+. +.+..++.|++....++.. .+..++++|+..+|+.+.... +|.+.+|++.+.
T Consensus 90 -----~-~~~----~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-i~~~~~~~i~~~ 149 (392)
T PRK10473 90 -----T-SSL----FLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITC-IIPVLAPVLGHL 149 (392)
T ss_pred -----c-HHH----HHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1 111 1234556666554444333 235778899999998877554 345566766543
No 52
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=94.52 E-value=0.016 Score=50.07 Aligned_cols=108 Identities=6% Similarity=0.116 Sum_probs=75.6
Q ss_pred Cchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHH
Q psy10696 37 KMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMW 115 (174)
Q Consensus 37 ~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~ 115 (174)
+.+. +.|.+.+.+.++.+++.++.+.+.+|-.|-|.+-++.++++++.+..++.+..-.. . ...+ +.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~--~--------~~~~--~~ 118 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS--I--------GPDN--TG 118 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc--c--------cccc--hh
Confidence 6675 99999999999999999999999887656556667777777777766654221100 0 0001 11
Q ss_pred HHHHHHHHHHHhhcCccCceeEEee----ecCCCCchhHHHHHHH
Q psy10696 116 FIFILCLLNFFSATGRAGNTIIQFR----CVSPEDKSLSIGITEA 156 (174)
Q Consensus 116 f~~lf~~~q~l~g~g~tP~~~lgl~----~V~~~~sslylGi~~~ 156 (174)
....++++.++.|++.+..++.... ..++|+|+.++|+...
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 163 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQF 163 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHH
Confidence 1223456889999998887776654 5788999999998765
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=94.38 E-value=0.0073 Score=51.54 Aligned_cols=138 Identities=14% Similarity=0.161 Sum_probs=94.3
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
+..+++++++..++.+.+....... .++++.+. +.+++.+.+-++..+..++.+.+.+|-+|-|-+-++.++.++
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIAL----LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLL 80 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHH
Confidence 3467888888888766554433332 34555554 899999999999999999999999886665555666666666
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALG 158 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~ 158 (174)
+++...+. .+. .+..++.|++.+..++... +.+|+|+++.+.|+... .
T Consensus 81 ~~~~~~~~--------------------~~~-------~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~-~ 132 (393)
T PRK11195 81 GCLLMLFG--------------------IHP-------LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEG-S 132 (393)
T ss_pred HHHHHHHH--------------------HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH-H
Confidence 65543211 001 1223455666665555443 46999999999999775 5
Q ss_pred HhhccCcchhhhhcc
Q psy10696 159 CGLAFIPGPIIYGAL 173 (174)
Q Consensus 159 rllg~IP~Pi~fG~~ 173 (174)
..+|.+.||.+-|++
T Consensus 133 ~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 133 TIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677888888887765
No 54
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=94.25 E-value=0.015 Score=48.88 Aligned_cols=141 Identities=13% Similarity=0.050 Sum_probs=85.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh------HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV------VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGS 77 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~------~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~ 77 (174)
+..+++++++.+++.+.+.++...+. ++++.+. +.|.+.+.+.++..++..+.+.+.+|..|-|++-.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 91 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYV----EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHH----HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH
Confidence 34567888888887776655544444 3444442 4599999999999999999999888754444555666
Q ss_pred hhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCc--cCce-eEEeeecCCCCchhHHHHH
Q psy10696 78 IIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGR--AGNT-IIQFRCVSPEDKSLSIGIT 154 (174)
Q Consensus 78 l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~--tP~~-~lgl~~V~~~~sslylGi~ 154 (174)
++.+++.++..+. ++.+.+ .+..++.|++. .|.. ....+.+++++|+.+.|+.
T Consensus 92 ~~~~~~~~~~~~~--------------------~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (408)
T PRK09874 92 LGMGIVMVLMGLA--------------------QNIWQF----LILRALLGLLGGFVPNANALIATQVPRNKSGWALGTL 147 (408)
T ss_pred HHHHHHHHHHHHH--------------------hhHHHH----HHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHH
Confidence 6666665543321 011111 12233333332 1211 1122357888899999888
Q ss_pred HHHHHhhccCcchhhhhcc
Q psy10696 155 EALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 155 ~~~~rllg~IP~Pi~fG~~ 173 (174)
... ..+|.+.+|.+.|.+
T Consensus 148 ~~~-~~~g~~~~~~~~~~l 165 (408)
T PRK09874 148 STG-GVSGALLGPLAGGLL 165 (408)
T ss_pred HHH-HHHHHHHHHHHHHHH
Confidence 664 455677777776653
No 55
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=94.17 E-value=0.0099 Score=52.36 Aligned_cols=123 Identities=15% Similarity=0.076 Sum_probs=77.9
Q ss_pred ccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccc
Q psy10696 33 VRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGS 111 (174)
Q Consensus 33 ~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~ 111 (174)
++.++.+. +.|.+...+.++..++..+.+.+-+|.++.+++..|.++.+++.+...+.+. + .
T Consensus 287 q~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~---~--------------~ 349 (495)
T PRK14995 287 QFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDF---S--------------T 349 (495)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC---C--------------C
Confidence 44456665 9999999999999999988888877655544556677777766654332100 0 0
Q ss_pred hhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 112 HFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 112 ~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
..+......++.-+-.|+...|......+.+++++++.+.|+..+ .|-+|...|+.+.|++
T Consensus 350 ~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 350 QQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETM-AYELGAGLGIAIFGLL 410 (495)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 011111111122222333334555566678999999999988876 7778888888887764
No 56
>PRK10504 putative transporter; Provisional
Probab=94.13 E-value=0.0074 Score=52.24 Aligned_cols=140 Identities=11% Similarity=0.123 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
..++++.++++...+.+.+ .++++.++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|.|..-.+.++.+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~----~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 13 WIVAFGFFMQSLDTTIVNT----ALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHhHHHHHH----HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 4556677777776554443 3445566788886 8999999999999999998888877644444444566666666
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~r 159 (174)
.+...+. + + .+. +.+..++.|++.....+... +..++++++.+.|+......
T Consensus 89 ~~~~~~~-----~--------------~-~~~----l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (471)
T PRK10504 89 SLFCALS-----G--------------T-LNE----LLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQ 144 (471)
T ss_pred HHHHHHh-----C--------------C-HHH----HHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 6543321 0 1 111 23456677777665544332 35778888888888776443
Q ss_pred hhccCcchhhhhcc
Q psy10696 160 GLAFIPGPIIYGAL 173 (174)
Q Consensus 160 llg~IP~Pi~fG~~ 173 (174)
+|..-+|.+.|++
T Consensus 145 -~g~~~g~~~~g~l 157 (471)
T PRK10504 145 -VGPLLGPALGGLL 157 (471)
T ss_pred -HHHHhhhHHHHHH
Confidence 4667777776653
No 57
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=94.11 E-value=0.032 Score=46.43 Aligned_cols=119 Identities=13% Similarity=0.021 Sum_probs=68.2
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
+++.+. +.+.+.+...++..++.++.+++.+|-.|-|.+-.+.++.++..+..... . ++.
T Consensus 268 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~--------------~~~ 328 (405)
T TIGR00891 268 DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI-----G--------------ANV 328 (405)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh-----C--------------Cch
Confidence 456665 89999999999999999999998776444344433333332221111000 0 001
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+......++..+..+..........-+.+|+++++.+.|+.+.+.+ +|...+|.++|++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~g~~~~g~l 387 (405)
T TIGR00891 329 AVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGN-LGGALAPIIGALL 387 (405)
T ss_pred HHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHH-HHHHHHHHHHHHH
Confidence 1111111222222222222222233357889999999999988665 5677899998875
No 58
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=94.03 E-value=0.01 Score=50.93 Aligned_cols=139 Identities=12% Similarity=0.057 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
...+++-+++.+-...+ +...+ .++++++.+. +.|.+.+.+-++.+++.++.+.+.+|-.|-|.+-.+.++.+++
T Consensus 11 ~~~~~~~~~~~~d~~~~-~~~~~---~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 11 IFLFILFIFSFLDRINI-GFAGL---TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred HHHHHHHHHHHhhhhhH-HHHHH---hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 34444555555533322 22222 5567888886 9999999999999999999998877644333556778888888
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~r 159 (174)
+++..+. + + .. .+.+..++.|++....++... +..++++|+.++|+......
T Consensus 87 ~~~~~~~-----~--------------~-~~----~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 142 (412)
T TIGR02332 87 STATMFA-----T--------------G-PE----SLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMP 142 (412)
T ss_pred HHHHHHh-----c--------------C-HH----HHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 7765442 0 1 11 123456677777776655443 35777889999999887554
Q ss_pred hhccCcchhhhhc
Q psy10696 160 GLAFIPGPIIYGA 172 (174)
Q Consensus 160 llg~IP~Pi~fG~ 172 (174)
+|.+.+|.+-|+
T Consensus 143 -~g~~~~~~~~~~ 154 (412)
T TIGR02332 143 -VTMALGLILSGY 154 (412)
T ss_pred -HHHHHHHHHHHH
Confidence 456666665443
No 59
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=93.98 E-value=0.012 Score=49.73 Aligned_cols=135 Identities=12% Similarity=0.128 Sum_probs=83.4
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
+..+..++.++-...+ +.. +.+++++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|-|.+-.+.++.+++.
T Consensus 19 ~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 94 (406)
T PRK11551 19 LCFLVALLEGLDLQSA-GVA---APRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFS 94 (406)
T ss_pred HHHHHHHHHHHHHHHH-HHH---HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 3445566666644332 222 235567788885 99999999999999999999998887444445556666666665
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHHh
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGCG 160 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~rl 160 (174)
++..+. + + .+ .+.+..++.|++....++.. .+.+++|+|+.+.|+.+... .
T Consensus 95 ~~~~~~-----~--------------~-~~----~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~ 149 (406)
T PRK11551 95 LATAQA-----W--------------D-FP----SLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGV-P 149 (406)
T ss_pred HHHHHh-----c--------------c-HH----HHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-H
Confidence 543321 0 1 11 12345666676655544333 34577888999998887644 3
Q ss_pred hccCcchhh
Q psy10696 161 LAFIPGPII 169 (174)
Q Consensus 161 lg~IP~Pi~ 169 (174)
+|...+|.+
T Consensus 150 ~g~~~~~~~ 158 (406)
T PRK11551 150 FGGALASVI 158 (406)
T ss_pred HHHHHHHHH
Confidence 344445544
No 60
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=93.91 E-value=0.025 Score=46.38 Aligned_cols=121 Identities=13% Similarity=0.008 Sum_probs=73.9
Q ss_pred cCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccch
Q psy10696 34 RKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSH 112 (174)
Q Consensus 34 ~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~ 112 (174)
++++.+. +.+.+.+...++..++.++.+++.+|-+|.+.+.++.++.+++.+...+.+. .+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~- 294 (377)
T TIGR00890 233 QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM-----------------LN- 294 (377)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc-----------------ch-
Confidence 3345554 8888999999999999999999887755555666666666666654433210 00
Q ss_pred hHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 113 FMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 113 ~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
...+....++..+..|...+.......+.+++++++.+.|+...... +|...+|.+.|++
T Consensus 295 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l 354 (377)
T TIGR00890 295 DVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKA-VAGIFGGLIASHA 354 (377)
T ss_pred hHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHH-HHHHHHHHHHHHH
Confidence 11121111122222222222222223346889999999999987654 6778888888764
No 61
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=93.83 E-value=0.02 Score=54.88 Aligned_cols=148 Identities=15% Similarity=0.097 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
+..+++++++..++...+......++.+.....+..+..+++.+.+.++..++.++.+++.+|-.|-|.+-++.++..++
T Consensus 11 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~ 90 (1146)
T PRK08633 11 FLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGL 90 (1146)
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHH
Confidence 44566777777665554444333333211111122247899999999999999999999988754434333333333333
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCce----eEEeeecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNT----IIQFRCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~----~lgl~~V~~~~sslylGi~~~~~r 159 (174)
+++..+. .. . +..+. +++..++.|++.+... .+.-+.+++++++.++|+..+..
T Consensus 91 ~~~~~~~----~~---~----------~~~~~----l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~- 148 (1146)
T PRK08633 91 TLLIVLA----YY---L----------GWFWL----AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFT- 148 (1146)
T ss_pred HHHHHHH----HH---H----------ccHHH----HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHH-
Confidence 3222111 00 0 01111 2234444555444333 33445788999999999987744
Q ss_pred hhccCcchhhhhcc
Q psy10696 160 GLAFIPGPIIYGAL 173 (174)
Q Consensus 160 llg~IP~Pi~fG~~ 173 (174)
.+|.+.||++.|++
T Consensus 149 ~ig~~lg~~l~~~l 162 (1146)
T PRK08633 149 IVAILAGTALFSFL 162 (1146)
T ss_pred HHHHHHHHHHHHHH
Confidence 45777777776654
No 62
>TIGR00893 2A0114 d-galactonate transporter.
Probab=93.70 E-value=0.022 Score=46.71 Aligned_cols=150 Identities=17% Similarity=0.157 Sum_probs=78.2
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeeeehhhhhhhh
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVALGSIIMSIG 83 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig~g~l~~~~g 83 (174)
.+++..++.......+.+....++. +.++.+. +.+.+.+...++..++.++.+++.+| ++|++.+-.......++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLV---QERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH---HHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 3445555555555555544444443 3456664 88999999999999999888887665 23321111111111111
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhcc
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAF 163 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~ 163 (174)
.+.....-... + . . +..+.......++....+ ...+.+++..+.+|+++|+.+.|+...+. -+|.
T Consensus 296 ~~~~~~~~~~~-~--~---------~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~g~ 360 (399)
T TIGR00893 296 GLVLSLLMFAT-N--Y---------V-NIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLG-NLGG 360 (399)
T ss_pred HHHHHHHHHHh-c--c---------c-hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHH-HHhh
Confidence 11100000000 0 0 0 111212222222222222 12333344445789999999999999866 5678
Q ss_pred Ccchhhhhcc
Q psy10696 164 IPGPIIYGAL 173 (174)
Q Consensus 164 IP~Pi~fG~~ 173 (174)
..+|.+.|++
T Consensus 361 ~~~~~i~g~l 370 (399)
T TIGR00893 361 IVGPIVIGAI 370 (399)
T ss_pred hhhhHHhhhh
Confidence 8899998875
No 63
>KOG2325|consensus
Probab=93.67 E-value=0.096 Score=46.76 Aligned_cols=140 Identities=19% Similarity=0.273 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCccee-eeehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKW-VALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prw-ig~g~l~~~ 81 (174)
..+..+-++++++..+-+++...+|+.++.+. -. ...|++.++..+|.++..+.-++...|..+-|| +-.|.++..
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~--A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~ 113 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPT--ATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAI 113 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCC--CCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHH
Confidence 45667789999999998888888888776663 34 489999999999999999999998887665555 356777888
Q ss_pred hhcccc-cccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee-e----cCCCCchhHHHHHH
Q psy10696 82 IGCFLR-TYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR-C----VSPEDKSLSIGITE 155 (174)
Q Consensus 82 ~g~~l~-~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~-~----V~~~~sslylGi~~ 155 (174)
+|++++ ++.... ++ +.|+ ..++-++.|+|.+-. ..+| | -.++||+-+++...
T Consensus 114 ~g~llY~~l~~~~----------------~~--~~y~--mL~~R~l~Gvg~~n~--a~lR~Y~a~~s~~~dR~rA~a~~~ 171 (488)
T KOG2325|consen 114 IGNLLYLALAYVP----------------NG--VKYL--MLVARILTGVGVGNF--AVLRAYIADASTVEDRPRAFAATS 171 (488)
T ss_pred HHHHHHHHHHhcc----------------cc--hHHH--HHHHHHHcCcCcccH--HHHHHHHHhccCccchHHHHHHhh
Confidence 888877 333110 01 2233 456899999985432 2234 2 23455555555443
Q ss_pred HHHHhhccCcchh
Q psy10696 156 ALGCGLAFIPGPI 168 (174)
Q Consensus 156 ~~~rllg~IP~Pi 168 (174)
. .+++|.+.||.
T Consensus 172 ~-~~vlg~ilGp~ 183 (488)
T KOG2325|consen 172 G-GFVLGIILGPT 183 (488)
T ss_pred h-HHHHHHHHhHH
Confidence 3 44556666654
No 64
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=93.40 E-value=0.021 Score=48.34 Aligned_cols=140 Identities=12% Similarity=0.109 Sum_probs=91.8
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
.+.+..++...+.+.+++....+++| .+.+. +.|.+.+...++..+...+...+.+|.++.|.+-+|.+..+++-
T Consensus 209 ~~l~~~~l~~~~~~~~~~~~~~~l~~----~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 209 RFLAAVCLIQGAHAAYYGFSAIYWQA----AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRW 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 34455566566677777777777743 46675 89999888888888887777776666555566677777777665
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeee---cCCCCchhHHHHHHHHHHhh
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRC---VSPEDKSLSIGITEALGCGL 161 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~---V~~~~sslylGi~~~~~rll 161 (174)
+...+. ++.+ .+.+.|+++|+...-.++..+++ .+++++..+.|+.+++..-+
T Consensus 285 ~~~~~~--------------------~~~~----~~~~~q~l~g~~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~ 340 (382)
T TIGR00902 285 AIIGAI--------------------EAFP----LIFLLQILHCGTFAVCHLAAMRYIAAQPGSEIAKLQALYNALAMGG 340 (382)
T ss_pred HHHHhH--------------------hhHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhHHHHHHHHHHHHHHH
Confidence 544322 1111 12345777777666555555543 36677788888887666667
Q ss_pred ccCcchhhhhcc
Q psy10696 162 AFIPGPIIYGAL 173 (174)
Q Consensus 162 g~IP~Pi~fG~~ 173 (174)
|..-+|.+-|++
T Consensus 341 g~~~g~~~~G~l 352 (382)
T TIGR00902 341 LIAIFTAFAGFI 352 (382)
T ss_pred HHHHHHHHHHHH
Confidence 777777777764
No 65
>TIGR00895 2A0115 benzoate transport.
Probab=93.30 E-value=0.028 Score=46.48 Aligned_cols=121 Identities=17% Similarity=0.235 Sum_probs=74.6
Q ss_pred ccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccc
Q psy10696 33 VRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGS 111 (174)
Q Consensus 33 ~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~ 111 (174)
+++++.+. +.+.+.+...++..++..+.+++.+|-+| |.+..+....++.+++.... . + +
T Consensus 277 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~---~-~--------------~ 337 (398)
T TIGR00895 277 MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGP-RVTALLLLLGAVFAVLVGST---L-F--------------S 337 (398)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-HHHHHHHHHHHHHHHHHHHH---h-h--------------C
Confidence 45566665 88999999999999999999988776332 33333333333333222110 0 0 1
Q ss_pred hhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhccC
Q psy10696 112 HFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGALL 174 (174)
Q Consensus 112 ~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~i 174 (174)
........++..+..+.......+...+.+|+++|+.++|+...+.+ +|...||.+.|+++
T Consensus 338 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~g~~~~G~ll 398 (398)
T TIGR00895 338 -PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGR-LGAIIGPILAGYLL 398 (398)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH-HHHHHHHHhHHhcC
Confidence 11112222233344444455555566667899999999999988665 67888999999874
No 66
>PRK12307 putative sialic acid transporter; Provisional
Probab=92.97 E-value=0.02 Score=48.69 Aligned_cols=136 Identities=14% Similarity=0.075 Sum_probs=85.4
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
...++.+..++....... .+..++++++.+. +.+.+.+.+.++..++.++.+.+.+|-.|-+++-++.++.++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~ 97 (426)
T PRK12307 22 SAWLGYVFDGFDFMLIFY----IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGT 97 (426)
T ss_pred HHHHHHHHHHhHHHHHHH----HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 344555555654433222 2234567788885 99999999999999999999999887555455667778877777
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHHHHh
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEALGCG 160 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~~rl 160 (174)
+...+.+ + .+ .+.+..++.|++....++.. .+..++|+|+.+.|+... ..-
T Consensus 98 ~~~~~~~-------------------~-~~----~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ 152 (426)
T PRK12307 98 GLSGLAS-------------------G-VI----MLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVS-GFG 152 (426)
T ss_pred HHHHHHh-------------------H-HH----HHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHH-HHh
Confidence 6544420 0 11 12345566776665544433 235677888988888765 333
Q ss_pred hccCcchhhh
Q psy10696 161 LAFIPGPIIY 170 (174)
Q Consensus 161 lg~IP~Pi~f 170 (174)
+|.+.+|.+.
T Consensus 153 lg~~~~~~l~ 162 (426)
T PRK12307 153 IGNIIAAYFM 162 (426)
T ss_pred HHHHHHHHHH
Confidence 4555555443
No 67
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=92.92 E-value=0.037 Score=48.77 Aligned_cols=144 Identities=11% Similarity=0.028 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC-Ccceeeeehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG-HKTKWVALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~-~~prwig~g~l~~~ 81 (174)
+.++++.++....+..+..+.-..|+++. ..++.+. +.|.+.+.+.++..++.++.+++.+|. .|.|-+-++.++.+
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~-~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~ 90 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQ-AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLM 90 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHH
Confidence 34556677777776666666666676421 1167775 999999999999999999999998873 44445567777777
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCC---CchhHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPE---DKSLSIGIT 154 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~---~sslylGi~ 154 (174)
+|.++..+.+ + .+. +.++..+.|+|.....+.. -+..+++ +|+.+.++.
T Consensus 91 ~g~~~~~~~~-------------------~-~~~----~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~ 146 (475)
T TIGR00924 91 LGHFMLAMSI-------------------Y-PDL----IFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLF 146 (475)
T ss_pred HHHHHHHhcc-------------------c-HhH----HHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhH
Confidence 7776655431 0 111 1233445555554433222 2234443 366677877
Q ss_pred HHHHHhhccCcchhhhhcc
Q psy10696 155 EALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 155 ~~~~rllg~IP~Pi~fG~~ 173 (174)
+...+ +|.+.||.+.|++
T Consensus 147 ~~~~n-iG~~ig~~l~g~l 164 (475)
T TIGR00924 147 YMSIN-IGSFISPLLAGVI 164 (475)
T ss_pred HHHHH-HHHHHHHHHHHHH
Confidence 76554 5777788777654
No 68
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=92.36 E-value=0.052 Score=47.19 Aligned_cols=123 Identities=14% Similarity=0.173 Sum_probs=88.6
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
.+-++.|..|..| |+. .+-++|+++.++.|. ..|.+.+.|.++.+++.++...+-+|-+|-|-+=....++.+|-
T Consensus 17 aLa~~~F~igttE--fv~--~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n 92 (394)
T COG2814 17 ALALAAFAIGTTE--FVP--VGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSN 92 (394)
T ss_pred HHHHHHHHHHhHH--HHH--HhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Confidence 3444555555433 333 345689999999996 99999999999999999999999998777665544555555554
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHH
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEA 156 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~ 156 (174)
++.++- ..|. ++.++.++.|+...-.+.++. |-|+|++|+-++|+..+
T Consensus 93 ~l~alA-----------------------p~f~-~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~ 144 (394)
T COG2814 93 LLSALA-----------------------PSFA-VLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFT 144 (394)
T ss_pred HHHHHh-----------------------ccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHH
Confidence 443321 1122 346788888888877776654 46999999999998875
No 69
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=92.30 E-value=0.012 Score=50.89 Aligned_cols=114 Identities=12% Similarity=0.041 Sum_probs=74.0
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHH
Q psy10696 40 VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFI 119 (174)
Q Consensus 40 ~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~l 119 (174)
++.|.+.+...++..++..+...+.+|-.+-|++-++.++.+++..+..+.+.. .... ..
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~----------------~~~~----~~ 310 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE----------------YFGY----AL 310 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc----------------hhhH----HH
Confidence 477999999999999998888887766544445566666666665444332000 0001 12
Q ss_pred HHHHHHHhhcCccCceeE----EeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 120 LCLLNFFSATGRAGNTII----QFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 120 f~~~q~l~g~g~tP~~~l----gl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+.+.+++.|++....++. .-+.+|+++++.+.|+.+....-+|.+.||++.|++
T Consensus 311 l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l 368 (418)
T TIGR00889 311 LFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVM 368 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 233455555554333322 234688899999999998767788888999999875
No 70
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=92.16 E-value=0.09 Score=45.53 Aligned_cols=63 Identities=13% Similarity=0.262 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGK 66 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~ 66 (174)
+..+++.|+++|++++..++....++.+.+++.+.+...|+..+...+|..++..+.+++..+
T Consensus 131 ~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~ 193 (465)
T TIGR00894 131 IALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES 193 (465)
T ss_pred chHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345788999999999999999999999999888778889999999999999999998887543
No 71
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=91.99 E-value=0.017 Score=53.98 Aligned_cols=124 Identities=11% Similarity=0.151 Sum_probs=76.8
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
++.++.+..|+-. ..++...+ .+++.++.+. +.+++.+.+.+|.+++.++.+++..|-.|.+++-++.++.++++
T Consensus 171 i~~l~~~~~g~d~-~~is~ilp---~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ 246 (742)
T TIGR01299 171 VLGLALMADGVEV-FVVGFVLP---SAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFA 246 (742)
T ss_pred HHHHHHHHHHHHH-HHHHHHHH---HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3444455444422 22333333 4456788886 99999999999999999999999887555566666777777766
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHH
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~ 157 (174)
++..+. ++.+. ++++.++.|++.+..+++.. +..+++.|+..+++..+.
T Consensus 247 ll~afa--------------------~s~~~----llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~ 299 (742)
T TIGR01299 247 FFSSFV--------------------QGYGF----FLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMF 299 (742)
T ss_pred HHHHHH--------------------hhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 654322 01111 22345555555544443333 357788888888876553
No 72
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=91.97 E-value=0.063 Score=45.69 Aligned_cols=142 Identities=13% Similarity=0.108 Sum_probs=77.1
Q ss_pred HHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeee-ehhhhhhhhccc
Q psy10696 9 ISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVA-LGSIIMSIGCFL 86 (174)
Q Consensus 9 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig-~g~l~~~~g~~l 86 (174)
+..+++..+..++.+....|++ +.+.+. +.+.+.+...++..++.++.+++.+|.+|.|++. .+.+..++.++.
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~----~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~ 304 (402)
T TIGR00897 229 MVRIINTIGLFGFAVFLPMFVA----ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLA 304 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 3444555544444444445553 346664 7888888888999999999999888755545442 333333443322
Q ss_pred ccc-cccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCc
Q psy10696 87 RTY-TNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIP 165 (174)
Q Consensus 87 ~~l-~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP 165 (174)
..+ +. ... ++....+...+..+....+. .|.... ++..+|++|+.+.|+.+...+ +|.+.
T Consensus 305 l~~~~~--~~~-------------~~~~~~~~~~~~~G~~~~~~--~~~~~~-~~~~~~~~~g~~~g~~~~~~~-lg~~~ 365 (402)
T TIGR00897 305 LYYIPQ--HFG-------------HSFAVALIIAIALGIFLAGY--VPLAAV-FPTLAPKHKGAAMSVLNLSAG-LSAFL 365 (402)
T ss_pred HHHHHH--ccC-------------CcHHHHHHHHHHHHHHHHHH--HHHHHH-HHhhCcchhHHHHHHHHHHHH-HHHHH
Confidence 211 10 000 01011112222223222222 333322 234677899999999887654 45667
Q ss_pred chhhhhcc
Q psy10696 166 GPIIYGAL 173 (174)
Q Consensus 166 ~Pi~fG~~ 173 (174)
+|.+.|.+
T Consensus 366 gp~i~g~l 373 (402)
T TIGR00897 366 APAIAVLF 373 (402)
T ss_pred HHHHHHHH
Confidence 99888865
No 73
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=91.88 E-value=0.12 Score=43.53 Aligned_cols=129 Identities=16% Similarity=0.077 Sum_probs=74.4
Q ss_pred cCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccch
Q psy10696 34 RKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSH 112 (174)
Q Consensus 34 ~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~ 112 (174)
++++.+. +.+.+.....++..++.++.+++.+|-.|-+.+.++..+++++.+...+....-.. ..+ ...
T Consensus 312 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~ 381 (481)
T TIGR00879 312 ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVT--GSS--------KSS 381 (481)
T ss_pred HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccC--Ccc--------cch
Confidence 4456664 77888888888888888888888776444344455566666665554421100000 000 000
Q ss_pred hHHHHHHHHHHHHHhhcCccCceeEE-eeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 113 FMWFIFILCLLNFFSATGRAGNTIIQ-FRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 113 ~~~f~~lf~~~q~l~g~g~tP~~~lg-l~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
...++...++.....+.+..|..... .+.+++++|+.+.|+.....+ +|.+.+|.++|++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-lg~~i~~~~~~~~ 442 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANW-LANFIVGFLFPTM 442 (481)
T ss_pred hHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 12222222233334445555555443 457888899999999987554 5777788877754
No 74
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=91.67 E-value=0.069 Score=48.03 Aligned_cols=136 Identities=15% Similarity=0.194 Sum_probs=81.4
Q ss_pred HhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccc
Q psy10696 13 VLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTN 91 (174)
Q Consensus 13 ~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~ 91 (174)
+-++..++++.+-.-+. .+.++.+. ..|++.++..+|.+++.++.+.+..+.++.|.+..+.+..++..+..++.+
T Consensus 229 ~~~l~~~a~~aLlPl~a---~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~ 305 (524)
T PF05977_consen 229 LFNLFASAVWALLPLFA---RDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP 305 (524)
T ss_pred HHHHhhhHHHHhhhHHH---HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch
Confidence 33444444555432222 23456665 899999999999999999999988776677788888888887766655431
Q ss_pred cccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhh
Q psy10696 92 CSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYG 171 (174)
Q Consensus 92 c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG 171 (174)
+.+.....+++.-+....-.++..+...+.+|++.++-.+++..++... +.-.|..++|
T Consensus 306 --------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G 364 (524)
T PF05977_consen 306 --------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWG 364 (524)
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1111111112222222222344445555688888888888887764432 2223455555
Q ss_pred c
Q psy10696 172 A 172 (174)
Q Consensus 172 ~ 172 (174)
.
T Consensus 365 ~ 365 (524)
T PF05977_consen 365 F 365 (524)
T ss_pred H
Confidence 4
No 75
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=91.66 E-value=0.2 Score=42.94 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=78.4
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCccee-eeehhhhhhhhcc
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKW-VALGSIIMSIGCF 85 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prw-ig~g~l~~~~g~~ 85 (174)
.+..+.+..+..++.+...+++++. ..+.+ .+.+.+.+...++..++.++.++..+|-.+.|+ +....+..+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~p~~l~~~--~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~- 324 (412)
T TIGR02332 248 TLAYFCLTNTLSAINIWTPQILQSF--NQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW- 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-
Confidence 3444445454555556566667542 23445 488999999999999999999999887433343 223333333322
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe-eecCCCCchhHHHHHHHHHHhhccC
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF-RCVSPEDKSLSIGITEALGCGLAFI 164 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl-~~V~~~~sslylGi~~~~~rllg~I 164 (174)
..... .+ +.......+... .+......+...... ...++|+++.+.|+.+.+.+ +|.+
T Consensus 325 ~~~~~----~~--------------~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~-~g~~ 383 (412)
T TIGR02332 325 LLASA----TD--------------HNLIQLLGIIMA--SMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGN-IGSA 383 (412)
T ss_pred HHHHh----cC--------------CHHHHHHHHHHH--HHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhh-hhhh
Confidence 11110 00 001111111111 111111223222222 25788899999999999777 4888
Q ss_pred cchhhhhcc
Q psy10696 165 PGPIIYGAL 173 (174)
Q Consensus 165 P~Pi~fG~~ 173 (174)
.+|.++|.+
T Consensus 384 ~~p~~~g~i 392 (412)
T TIGR02332 384 LSPFLIGIL 392 (412)
T ss_pred hhhhhcccc
Confidence 899888865
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=91.65 E-value=0.087 Score=50.90 Aligned_cols=145 Identities=12% Similarity=0.043 Sum_probs=82.2
Q ss_pred ccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCC-C
Q psy10696 21 YWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPN-G 98 (174)
Q Consensus 21 ~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~-~ 98 (174)
+.+....|+. ..++.+. +.|.+.+.+.+|.+++.++.+.+..+..+.+++..+.++.+++.+...+..-.-... .
T Consensus 244 ~~~~~p~~~~---~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (1140)
T PRK06814 244 VLSQLPLLAK---ETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPA 320 (1140)
T ss_pred HHHHhHHHHH---HHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccc
Confidence 3444455553 3456664 999999999999999999999987655555666667776666555333210000000 0
Q ss_pred cc--ccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 99 MA--TQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 99 ~~--~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
.. ....... .+ .+.+....++.-+..++...|..++..+.+++++++.++|+..++. .+|...+|++.|.
T Consensus 321 ~~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~-~~~~~ig~~~~g~ 392 (1140)
T PRK06814 321 QLKSILVFLSK--RH-GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLN-AAFMVAGTIILAL 392 (1140)
T ss_pred cccchhhhhcc--cc-cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHH-HHHHHHHHHHHHH
Confidence 00 0000000 01 1222222222234445555667777778899999999999988754 4444555555554
No 77
>PRK10133 L-fucose transporter; Provisional
Probab=91.58 E-value=0.036 Score=48.21 Aligned_cols=142 Identities=11% Similarity=0.075 Sum_probs=89.0
Q ss_pred hhHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhh
Q psy10696 2 FSVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIM 80 (174)
Q Consensus 2 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~ 80 (174)
.+++.+.+.-++.|+.... ....+++++++++.+. +.|.+.+.+.++..++.++.+.+.+|-.+-|-+-.|.++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~----~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 26 IPFALLCSLFFLWAVANNL----NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4677777777888886532 2334567788999996 9999999999999999999998877644434556788888
Q ss_pred hhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee----ecCCCCchhHHHHHHH
Q psy10696 81 SIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR----CVSPEDKSLSIGITEA 156 (174)
Q Consensus 81 ~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~----~V~~~~sslylGi~~~ 156 (174)
++++++.... ... ++.. .+.++.++.|+|.....+..-+ ..+++++...+++.+.
T Consensus 102 ~~~~~l~~~~---~~a--------------~~~~----~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~ 160 (438)
T PRK10133 102 ALGAALFWPA---AEI--------------MNYT----LFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQT 160 (438)
T ss_pred HHHHHHHHHH---Hhc--------------CCHH----HHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHH
Confidence 8887664211 000 1111 2345666777776555444333 3344445455666554
Q ss_pred HHHhhccCcchhh
Q psy10696 157 LGCGLAFIPGPII 169 (174)
Q Consensus 157 ~~rllg~IP~Pi~ 169 (174)
.. -+|...||++
T Consensus 161 ~~-~~G~~~g~~~ 172 (438)
T PRK10133 161 FN-SFGAIIAVVF 172 (438)
T ss_pred HH-HHHHHHHHHH
Confidence 32 2355555544
No 78
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=91.58 E-value=0.058 Score=44.55 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=73.3
Q ss_pred cccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCcc
Q psy10696 32 NVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCG 110 (174)
Q Consensus 32 ~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~ 110 (174)
++++++.+. +.|.+.+.+.++.+++.++.+.+.+|-.|-|++-++.++.+++.+...+.+
T Consensus 28 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~------------------- 88 (366)
T TIGR00886 28 IKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV------------------- 88 (366)
T ss_pred HHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 567888886 999999999999999999999998875554566677777777766544320
Q ss_pred chhHHHHHHHHHHHHHhhcCccCc---eeEEeeecCCCCchhHHHHHHHH---HHhhccCcchhh
Q psy10696 111 SHFMWFIFILCLLNFFSATGRAGN---TIIQFRCVSPEDKSLSIGITEAL---GCGLAFIPGPII 169 (174)
Q Consensus 111 ~~~~~f~~lf~~~q~l~g~g~tP~---~~lgl~~V~~~~sslylGi~~~~---~rllg~IP~Pi~ 169 (174)
++.+. +.++.++.|++.... ..+.-+..++|+|+...++.... ...+|...+|.+
T Consensus 89 ~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 89 QSYSV----LLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred hhHHH----HHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 01111 123445555554322 22222357788999999987643 334444444433
No 79
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=91.42 E-value=0.033 Score=48.54 Aligned_cols=122 Identities=16% Similarity=0.093 Sum_probs=75.7
Q ss_pred eeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCC
Q psy10696 27 AYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGAC 105 (174)
Q Consensus 27 ~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C 105 (174)
.+++++.+.++.+. +.+.+.+.+-++..++..+.+.+.+|-.|-|++-.+.++.++++++..+.+
T Consensus 40 ~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-------------- 105 (455)
T TIGR00892 40 VFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS-------------- 105 (455)
T ss_pred hhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh--------------
Confidence 35667788899885 999999999988888888888887775555566667777777766543320
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcCccCc----eeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 106 PADCGSHFMWFIFILCLLNFFSATGRAGN----TIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 106 ~~~C~~~~~~f~~lf~~~q~l~g~g~tP~----~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+ .+... ....++.|++.... ..+..++. +++|+.++|+..... -+|...+|++.|++
T Consensus 106 -----~-~~~l~---~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~r~~a~g~~~~~~-~~g~~~~~~l~~~l 166 (455)
T TIGR00892 106 -----N-VIELY---LTAGFITGLGLAFNFQPSLTMLGKYF-YRRRPLANGLAMAGS-PVFLSTLAPLNQYL 166 (455)
T ss_pred -----h-HHHHH---HHHHHHHHhcchhhhhHHHHHHHHHH-HhhHHHHHHHHHhcc-cHHHHHHHHHHHHH
Confidence 1 11111 11224445544432 22222345 578999999988644 33445566665543
No 80
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=91.36 E-value=0.078 Score=43.44 Aligned_cols=144 Identities=13% Similarity=0.116 Sum_probs=74.2
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC-Ccceee-eehhhh-hhhh
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG-HKTKWV-ALGSII-MSIG 83 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~-~~prwi-g~g~l~-~~~g 83 (174)
.+..++.......+......++. ++++.+. +.+.+.+...++..++.++.++..+|. +|.|+. ...... ..++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~ 298 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLT---QEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVS 298 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Confidence 34444444444444444444443 3456664 889999999999999999888887652 333322 211111 1111
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhcc
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAF 163 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~ 163 (174)
....... . -.+........+..+....+ ..........+.+|+++|+.+.|+..... -+|.
T Consensus 299 ~~~~~~~-----~------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~ 359 (379)
T TIGR00881 299 LLVYWLN-----P------------AANPLMDLICLFALGFLVYG-PQMLIGVIASELAPKKAAGTAAGFVGFFA-YLGG 359 (379)
T ss_pred HHHHhcC-----c------------chhHHHHHHHHHHHHHHHhh-hhHHHHHHHHHhcCcchhHHHHHHHHHhh-hhhh
Confidence 1111000 0 00111112222223322111 11222233445789999999999998755 4556
Q ss_pred Ccchhhhhcc
Q psy10696 164 IPGPIIYGAL 173 (174)
Q Consensus 164 IP~Pi~fG~~ 173 (174)
..+|.+.|.+
T Consensus 360 ~~~~~~~g~l 369 (379)
T TIGR00881 360 ILAGLPLGYL 369 (379)
T ss_pred hhhhhhHHHH
Confidence 6788888865
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=91.34 E-value=0.074 Score=44.11 Aligned_cols=141 Identities=12% Similarity=0.125 Sum_probs=80.1
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHh-hhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWD-VGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~-ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
.+.+..++...+.....+....+++| ++.+. +.|.+...+. ++..++.++.+++.+|-.|-|++-++.++.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 213 LLLLLIVLYKLGDSAATVLTTLFLLD----MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 33444444555555555666666654 45665 8888777655 577788888888877655445555566666655
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHH
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~r 159 (174)
..+..+.......++ . + .++.+......++..+..+....+..++..+.+|+|+++-+.|+.+...+
T Consensus 289 ~~~~~~~~~~~~~~~-~--~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 289 NAGFVWLASNGHHDG-I--T------FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHhcCcccc-c--c------cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 443332100000000 0 0 01112222223334455555566666677778999999999999887654
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=91.14 E-value=0.15 Score=49.11 Aligned_cols=106 Identities=13% Similarity=0.107 Sum_probs=67.2
Q ss_pred CCCch-h-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccch
Q psy10696 35 KNKMP-V-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSH 112 (174)
Q Consensus 35 ~~~~s-~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~ 112 (174)
.++.+ . +.|.+.+...++.+++..+.+++..|..+-+.+.++.+.++++.+...+.. +
T Consensus 262 ~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~- 321 (1146)
T PRK08633 262 VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP-------------------S- 321 (1146)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh-------------------h-
Confidence 34555 5 789999999999999999999988765444455566666666655443321 1
Q ss_pred hHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHh
Q psy10696 113 FMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 160 (174)
Q Consensus 113 ~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rl 160 (174)
.+..+..+++..+..++...+..+...+.+++++++.++|+..++..+
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l 369 (1146)
T PRK08633 322 LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV 369 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH
Confidence 111222222223344444455556666778999999999988876553
No 83
>PRK11043 putative transporter; Provisional
Probab=91.05 E-value=0.056 Score=45.67 Aligned_cols=62 Identities=10% Similarity=0.038 Sum_probs=47.6
Q ss_pred eeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccccc
Q psy10696 27 AYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRT 88 (174)
Q Consensus 27 ~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~ 88 (174)
+.+++.+++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|-|++-.+.++.+++++...
T Consensus 27 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 89 (401)
T PRK11043 27 PAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGML 89 (401)
T ss_pred hhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHH
Confidence 45567778888885 999999999999999999999988764444455566666766666544
No 84
>TIGR00901 2A0125 AmpG-related permease.
Probab=90.99 E-value=0.057 Score=44.79 Aligned_cols=123 Identities=15% Similarity=0.148 Sum_probs=67.9
Q ss_pred ccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC------CCcceeeeehhhhhhhhcccccccccccCCCCccccC
Q psy10696 31 DNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK------GHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQG 103 (174)
Q Consensus 31 ~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~------~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~ 103 (174)
...|+++.+. +.|.+... .+...+ ..+.+.+.+| ++|..|+-.+.++.++..+...+-+.
T Consensus 13 ~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----------- 79 (356)
T TIGR00901 13 YWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----------- 79 (356)
T ss_pred HHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-----------
Confidence 4456778885 99988644 333333 3344433333 46666877666666665443333210
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 104 ACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 104 ~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
..+.+....+.++..+.......+...+..+.+++|+|+.+.|+.....+ +|.+.+|.+.+++
T Consensus 80 ------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~-~G~~~~~~l~~~l 142 (356)
T TIGR00901 80 ------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYR-AGMLLSGSLALVL 142 (356)
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 01122222222222333333334444455667899999999999876554 4777777766543
No 85
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=90.96 E-value=0.05 Score=45.93 Aligned_cols=143 Identities=12% Similarity=0.053 Sum_probs=84.7
Q ss_pred HHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhh-hhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccc
Q psy10696 12 TVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDV-GTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTY 89 (174)
Q Consensus 12 ~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~i-g~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l 89 (174)
++..++.+..++....|+.| .+.+. +.|.+.....+ +..++..+.+.+.+|-.+.|++-.+.++.+...+....
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~----~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 293 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVD----AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFA 293 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHh----cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455556665566653 36675 88998877654 55566677777766655556665555554333322211
Q ss_pred cccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCC-CCchhHHHHHHHHHHhhccCcchh
Q psy10696 90 TNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSP-EDKSLSIGITEALGCGLAFIPGPI 168 (174)
Q Consensus 90 ~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~-~~sslylGi~~~~~rllg~IP~Pi 168 (174)
.. .... ... .........+..+..|...++.++...+..++ ++++...+...... -+|.+.+|.
T Consensus 294 ~~-~~~~------------~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~lg~~~g~~ 358 (390)
T TIGR02718 294 QA-AFWL------------APG-IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTR-DLGELIASS 358 (390)
T ss_pred HH-Hccc------------CCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHH-HHHHHHHHH
Confidence 10 0000 001 11112223445666777777777777777665 78899999988765 567888888
Q ss_pred hhhcc
Q psy10696 169 IYGAL 173 (174)
Q Consensus 169 ~fG~~ 173 (174)
+.|++
T Consensus 359 ~~G~l 363 (390)
T TIGR02718 359 IAGYL 363 (390)
T ss_pred HHHHH
Confidence 88864
No 86
>PRK10504 putative transporter; Provisional
Probab=90.86 E-value=0.052 Score=46.94 Aligned_cols=148 Identities=14% Similarity=0.090 Sum_probs=84.0
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIG 83 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g 83 (174)
...+.+.++..++.+....+..-|+++ .++.+ .+.|.+.....++...+..+...+.+|-+|.|.+-.+.+..+++
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 264 SLGLAGSFAGRIGSGMLPFMTPVFLQI---GLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALV 340 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 334455555555443332223223322 23445 48888888888888777777777777655555555677767766
Q ss_pred cccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhcc
Q psy10696 84 CFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAF 163 (174)
Q Consensus 84 ~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~ 163 (174)
.++..+.. . . ++ .+.....+++..+..+....+...+..+.+++++++.+.|+..+ .+-+|.
T Consensus 341 ~~~~~~~~----~-~-----------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~ 402 (471)
T PRK10504 341 SLLFMLVA----L-L-----------GW-YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSM-IMQLSM 402 (471)
T ss_pred HHHHHhcc----c-c-----------cc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHH-HHHHHH
Confidence 65544321 0 0 01 11111111112244444555555555667899999999999865 555577
Q ss_pred Ccchhhhhcc
Q psy10696 164 IPGPIIYGAL 173 (174)
Q Consensus 164 IP~Pi~fG~~ 173 (174)
..||.+.|++
T Consensus 403 ~ig~~i~g~l 412 (471)
T PRK10504 403 SIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 87
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=90.83 E-value=0.049 Score=44.62 Aligned_cols=106 Identities=18% Similarity=0.132 Sum_probs=68.8
Q ss_pred eecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCC
Q psy10696 28 YLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACP 106 (174)
Q Consensus 28 ~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~ 106 (174)
.+...+++++.+. +.|.+.+.+.++.+++.++.+.+.+|-.|-|.+-++.++.+++++...+.
T Consensus 25 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~---------------- 88 (377)
T TIGR00890 25 LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA---------------- 88 (377)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH----------------
Confidence 3456677888886 99999999999999999999998776444455567777777777654432
Q ss_pred CCccchhHHHHHHHHHHHHHhhcCccCceeEEeee---cCCCCchhHHHHHHHH
Q psy10696 107 ADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRC---VSPEDKSLSIGITEAL 157 (174)
Q Consensus 107 ~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~---V~~~~sslylGi~~~~ 157 (174)
++.+. +.+...+.|++.+..+...... ..||+|+.+.++....
T Consensus 89 ----~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (377)
T TIGR00890 89 ----DSLAA----LYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGG 134 (377)
T ss_pred ----HHHHH----HHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHh
Confidence 01111 1234445666655443333221 1246788888887663
No 88
>PRK15011 sugar efflux transporter B; Provisional
Probab=90.55 E-value=0.092 Score=44.56 Aligned_cols=79 Identities=14% Similarity=0.241 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHH-hhhhhhhhhhhhccCCCCCcceeeeehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAW-DVGTLASFLVSSYLGGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~-~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~ 81 (174)
.-.+.+..++.+++.+.+.+....++ .++++.+. +.|.+.+.. -++..+........+..++|-+++..+.+..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l---~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFL---TDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGV 93 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH---HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 34567779999998887777666655 56778875 999997655 44666666656663333444444544444444
Q ss_pred hhcc
Q psy10696 82 IGCF 85 (174)
Q Consensus 82 ~g~~ 85 (174)
++..
T Consensus 94 ~~~~ 97 (393)
T PRK15011 94 LACT 97 (393)
T ss_pred HHHH
Confidence 4443
No 89
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=90.52 E-value=0.091 Score=43.63 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=46.9
Q ss_pred eeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccc
Q psy10696 26 VAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFL 86 (174)
Q Consensus 26 ~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l 86 (174)
.+.++++.++++.+. +.|.+.+.+.++..++.++.+.+.+|-.|-|++-++.+..+++.+.
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 81 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILI 81 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 356778888999885 9999999999999999999999887644444555666665555543
No 90
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=90.45 E-value=0.032 Score=52.22 Aligned_cols=112 Identities=20% Similarity=0.307 Sum_probs=71.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHH
Q psy10696 41 VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFIL 120 (174)
Q Consensus 41 ~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf 120 (174)
..........++.+++.++.+++..|-.|-+.+..+.++.++++++..+. . + ....+.+.
T Consensus 596 ~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-----~--------------s-~~~ll~~~ 655 (742)
T TIGR01299 596 MIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-----N--------------S-ESAMIALL 655 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-----c--------------c-HHHHHHHH
Confidence 34555677778888888888888776444445667777777777665432 0 0 11122222
Q ss_pred HHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 121 CLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 121 ~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
++..++.+...+..+...-...|++.|+.++|+..++.| +|.+.||.+.|.+
T Consensus 656 ~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~r-lGaiigp~i~g~L 707 (742)
T TIGR01299 656 CLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCK-AAAVLGILIFGSF 707 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 333333333333334343446888999999999998777 6788899988864
No 91
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=90.29 E-value=0.054 Score=45.71 Aligned_cols=118 Identities=16% Similarity=0.142 Sum_probs=68.3
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
+.+.+. +.|.+.+.+.++..++.++.+++.+|..|.|.+-.+.+..+++.+...+. + +..
T Consensus 249 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~--------------~~~ 309 (406)
T PRK11551 249 GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA-----P--------------SFA 309 (406)
T ss_pred hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc-----C--------------cHH
Confidence 346664 88999999999999999998888766433333333333333333322211 0 000
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
..+...+..+- ..+...+..+++..+.+++++|+..+|+...+.+ +|...+|.+.|++
T Consensus 310 ~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~~g~~~~g~l 367 (406)
T PRK11551 310 GMLLAGFAAGL-FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGR-LGSMAGPLLAGQL 367 (406)
T ss_pred HHHHHHHHHHH-HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhh-HHHHHHhhhHhhh
Confidence 11111111221 1111223334444557899999999999988765 4667799998876
No 92
>PRK09528 lacY galactoside permease; Reviewed
Probab=90.27 E-value=0.039 Score=47.12 Aligned_cols=113 Identities=10% Similarity=-0.004 Sum_probs=68.5
Q ss_pred Cch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHH
Q psy10696 37 KMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMW 115 (174)
Q Consensus 37 ~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~ 115 (174)
+.+ .+.|.+.+...++..++..+.+.+.+|-.|.|.+-++.++.+++.++..+. + + .+.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-----~--------------~-~~~ 317 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-----T--------------G-PLE 317 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-----c--------------c-HHH
Confidence 445 488999998888888888888888777555566666666666665554432 0 1 111
Q ss_pred HHHHHHHHHHHhhcCccCcee----EEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 116 FIFILCLLNFFSATGRAGNTI----IQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 116 f~~lf~~~q~l~g~g~tP~~~----lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+ .+.+++.+.+.....+ ..-+..+++.++...+..+.+..-+|.+.+|.+.|++
T Consensus 318 ~----~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l 375 (420)
T PRK09528 318 V----SILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNL 375 (420)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHH
Confidence 1 1223344443322222 1223467777776655534446778899999988875
No 93
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=90.26 E-value=0.064 Score=45.22 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=46.9
Q ss_pred eeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccccc
Q psy10696 27 AYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRT 88 (174)
Q Consensus 27 ~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~ 88 (174)
+.++++.++++.+. +.|.+.+.+.++..++.++.+++.+|-.|-|++-.+.++.+++.+...
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 91 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVAL 91 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 34556678888886 999999999999999999999988875444455566666666665543
No 94
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=90.25 E-value=0.017 Score=40.28 Aligned_cols=103 Identities=18% Similarity=0.305 Sum_probs=56.6
Q ss_pred HHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHH
Q psy10696 46 SSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNF 125 (174)
Q Consensus 46 ~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~ 125 (174)
.+.+.++..++..+..+..+|.+|.|.+-.+..+..++.+...+. + + .+.+. +..+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~--------------~-~~~~~----~~~~ 59 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-----S--------------N-ITVLI----IARF 59 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-----c--------------c-HHHHH----HHHH
Confidence 345566777777777777666544454455555555555443321 0 1 11111 2233
Q ss_pred HhhcCcc----CceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 126 FSATGRA----GNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 126 l~g~g~t----P~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+.|++.. .......+.+++++|+...|+..... -+|...+|.+.|++
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~ 110 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGI-ALGPLLGPPLGGVL 110 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhH-HHHHHHhHHhHHHH
Confidence 3333333 22333345678888999999887644 45566677666653
No 95
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=90.22 E-value=0.076 Score=45.66 Aligned_cols=120 Identities=16% Similarity=0.159 Sum_probs=73.7
Q ss_pred eeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCC
Q psy10696 27 AYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGAC 105 (174)
Q Consensus 27 ~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C 105 (174)
+.+.++.+.++.+. +.+...+.+-++.+++.++.+.+.+|-.|-|.+-.+.++.+++++...+. +
T Consensus 37 p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~--------- 102 (413)
T PRK15403 37 PGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-----T--------- 102 (413)
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-----C---------
Confidence 44556778888886 99999999999999999999888777444445566777777776654432 0
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcCccCceeEE---e-eecCCCCchhHHHHHHHHHHhhccCcchhhhh
Q psy10696 106 PADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ---F-RCVSPEDKSLSIGITEALGCGLAFIPGPIIYG 171 (174)
Q Consensus 106 ~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg---l-~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG 171 (174)
+ .+. +.++.++.|++..-..+.. . +..+++++..++++..... -+|.+-||++.|
T Consensus 103 -----~-~~~----l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~lg~ 161 (413)
T PRK15403 103 -----S-MTQ----FLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIV-LVAPIIGPLSGA 161 (413)
T ss_pred -----C-HHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1 111 1234444454432111111 1 2456677888888777653 334555565544
No 96
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=90.15 E-value=0.09 Score=44.70 Aligned_cols=141 Identities=13% Similarity=0.141 Sum_probs=78.1
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC------CCcceeeeehhhh
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK------GHKTKWVALGSII 79 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~------~~~prwig~g~l~ 79 (174)
|...-+.||+..+=.......|+ |+.+.|. ++|.+.+..-. .+...+.+.+.+| ++|.+|+-++.++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l----~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~ 77 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWM----TVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVG 77 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHH----HHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHH
Confidence 45566778875443333333444 4557785 99999877764 5666666666554 3555688877777
Q ss_pred hhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHH
Q psy10696 80 MSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 80 ~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~r 159 (174)
.++......+.+ + +++.+.+..+.++..+.......+...+..+.+++|+|+.+.++.... .
T Consensus 78 ~~l~~~~l~~~~----~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g-~ 139 (402)
T PRK11902 78 LAASIAAMAFCP----P-------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLG-Y 139 (402)
T ss_pred HHHHHHHHHhcC----c-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHH-H
Confidence 766555433320 0 011222222212222333332233334445678999999999998753 3
Q ss_pred hhccCcchhhhh
Q psy10696 160 GLAFIPGPIIYG 171 (174)
Q Consensus 160 llg~IP~Pi~fG 171 (174)
-+|.+-++.+.+
T Consensus 140 ~~g~i~g~~l~~ 151 (402)
T PRK11902 140 RLAMLVSGGLAL 151 (402)
T ss_pred HHHHHHHhHHHH
Confidence 345555555433
No 97
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=90.09 E-value=0.22 Score=42.81 Aligned_cols=53 Identities=11% Similarity=0.199 Sum_probs=38.9
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASF 57 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~ 57 (174)
..++++|++||+++++.++...+++.|..++.+.....+........|..++.
T Consensus 125 ~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 125 ALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999887766555555555444444544443
No 98
>KOG3764|consensus
Probab=89.96 E-value=0.19 Score=44.11 Aligned_cols=107 Identities=15% Similarity=0.148 Sum_probs=79.0
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhccCCCC--CcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHH
Q psy10696 40 VVLGVMSSAWDVGTLASFLVSSYLGGKG--HKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFI 117 (174)
Q Consensus 40 ~~~g~i~~~~~ig~~~~~~~~s~~g~~~--~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~ 117 (174)
+++|++.+++.+-+++.-.+++.+-.|- +-|-. +|..++....+++++. ++ +.
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~--~Gl~vmf~sTilFafg--------------------~s-y~-- 160 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMV--AGLFVMFLSTILFAFG--------------------NS-YP-- 160 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHHH--HHHHHHHHHHHHHHHc--------------------ch-hH--
Confidence 4999999999999999999988876652 33333 4555556666666544 11 11
Q ss_pred HHHHHHHHHhhcCccCceeEEee-----ecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 118 FILCLLNFFSATGRAGNTIIQFR-----CVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 118 ~lf~~~q~l~g~g~tP~~~lgl~-----~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+.+++-.+.|+|.+-..|.|+. +-++++|+..+|+..... -||.+.||++-|.+
T Consensus 161 -~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfi-slG~lvgPpfGGil 219 (464)
T KOG3764|consen 161 -MLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFI-SLGVLVGPPFGGIL 219 (464)
T ss_pred -HHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHH-hccceecCCcccch
Confidence 3467899999999999998875 566677899999998744 56899999887753
No 99
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=89.64 E-value=0.035 Score=47.25 Aligned_cols=119 Identities=17% Similarity=0.141 Sum_probs=73.7
Q ss_pred eeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCC
Q psy10696 27 AYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGAC 105 (174)
Q Consensus 27 ~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C 105 (174)
+.+++++++++.+. +.|.+.+.+-++.+++.++.+++.+|-.| |++-++.+...+.+..... . .
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~gr-r~~~~~~~~~~~~~~~~~~------~---~----- 76 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFK-RWFLFGSLATFAAAAGRLL------D---P----- 76 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHH------H---h-----
Confidence 45567788999996 99999999999999999999999887443 3443333333332211000 0 0
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcCccCce---eEEeeecCCCCchhHHHHHHHHHHhhccCcchhhh
Q psy10696 106 PADCGSHFMWFIFILCLLNFFSATGRAGNT---IIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIY 170 (174)
Q Consensus 106 ~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~---~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~f 170 (174)
.+.. .+.+..++.|+|..... +..-++.++|+|+.++|+.... .-+|.+.+|++-
T Consensus 77 -----~~~~----~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~-~~lG~~l~~~~~ 134 (368)
T TIGR00903 77 -----FNYE----WLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFA-MYLGIIFALAAG 134 (368)
T ss_pred -----ccHH----HHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 0111 23456777787765321 1113468899999999988753 334555555443
No 100
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=89.54 E-value=0.082 Score=45.99 Aligned_cols=72 Identities=21% Similarity=0.435 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeee
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVA 74 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig 74 (174)
.+..++++|++.|+..+.|++.+.++-.+++++.+..+-+|.+.....++..++..++++.|+. +||..+..
T Consensus 100 ~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ 172 (394)
T COG2814 100 SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLA 172 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999999875 68877554
No 101
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=89.51 E-value=0.14 Score=41.66 Aligned_cols=67 Identities=24% Similarity=0.439 Sum_probs=57.7
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCCCCcceee
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWV 73 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwi 73 (174)
.++++|+++|++.+...+...+++.|..++.+.+...|.......+|..++..+.+++.. ....||.
T Consensus 87 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~~~~~~ 153 (352)
T PF07690_consen 87 LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-YFGWRWA 153 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HCHHCCH
T ss_pred HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-ccccccc
Confidence 688999999999999999999999999998777789999999999999999999998774 3334544
No 102
>PRK15075 citrate-proton symporter; Provisional
Probab=89.32 E-value=0.083 Score=45.50 Aligned_cols=121 Identities=9% Similarity=0.085 Sum_probs=66.0
Q ss_pred CCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc-cccccccccCCCCccccCCCCCCccchh
Q psy10696 36 NKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF-LRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 36 ~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~-l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
++.+. +.+.+...+.++..++..+.+++.+|-.|.|..-.+.+...+..+ ...+. .++ + . .
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~----------~--~-~ 331 (434)
T PRK15075 269 LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWL----VAA----------P--S-F 331 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH----HcC----------C--c-h
Confidence 45564 788888888888888888888877664333332222222111111 10000 000 0 0 1
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
........+..+..+....+.+....+.+|+++|+.++|+.+.+.+.++...+|.+.|++
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 332 ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 111111112223334433334444445789999999999988888887556689888865
No 103
>PRK09952 shikimate transporter; Provisional
Probab=89.23 E-value=0.31 Score=42.18 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVS 60 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~ 60 (174)
..++++|++||++.++.++...+++.|..++.+.+...+.....+.+|..++..+.
T Consensus 126 ~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~ 181 (438)
T PRK09952 126 VLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLV 181 (438)
T ss_pred HHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999988888888877766656667777777777777765443
No 104
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=89.01 E-value=0.11 Score=43.62 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=59.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHH
Q psy10696 41 VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFIL 120 (174)
Q Consensus 41 ~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf 120 (174)
..|.+.+...++..++....+++.+|-.|.|.+-.+.+..+++.+...+. + + .+..
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~--------------~-~~~~---- 314 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV-----Q--------------T-PLQL---- 314 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-----c--------------c-HHHH----
Confidence 45677777777887777777777666444343334444444433322211 0 0 1111
Q ss_pred HHHHHHhhcCccCce----eEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 121 CLLNFFSATGRAGNT----IIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 121 ~~~q~l~g~g~tP~~----~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
.+..++.|.+....+ +...+.+++++++...|+.... +-+|..-||.+.|++
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~g~~~gp~~~G~l 370 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSF-RDIGNVTGPLMGAAI 370 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHH-HHHHHHhhHHHHHHH
Confidence 122333343333222 2223456778888888887764 556788888888764
No 105
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=88.99 E-value=0.085 Score=45.75 Aligned_cols=147 Identities=19% Similarity=0.328 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceee-eehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWV-ALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwi-g~g~l~~~ 81 (174)
+.+|++..++.++..+.+++....|++|+-. .+. ..|.+.+...++=.....+...+-.| .++||+ -++.+..+
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg---~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~ 284 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGG---YSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYA 284 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---chhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHH
Confidence 4567788888899899999999888865432 343 66766666555555555555554443 444443 23332221
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeee----cCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRC----VSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~----V~~~~sslylGi~~~~ 157 (174)
+=-.++++ .. ++ .+....+..++|+++|..-.-.+..+.+| +|++.|+-++|+...+
T Consensus 285 vR~~l~a~-----~~-------------~~-~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~ 345 (400)
T PF03825_consen 285 VRWLLYAY-----FS-------------DP-WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSAL 345 (400)
T ss_pred HHHHHHHH-----hc-------------CC-cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHH
Confidence 11111111 00 01 12223445678999999887777777664 7889999999999998
Q ss_pred HHhhccCcchhhhhcc
Q psy10696 158 GCGLAFIPGPIIYGAL 173 (174)
Q Consensus 158 ~rllg~IP~Pi~fG~~ 173 (174)
..-+|...|..+.|++
T Consensus 346 ~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 346 SFGLGGAIGSLIGGWL 361 (400)
T ss_pred HhhHHHHHHHHHHHHH
Confidence 8888888888888875
No 106
>PRK09952 shikimate transporter; Provisional
Probab=88.97 E-value=0.094 Score=45.38 Aligned_cols=123 Identities=12% Similarity=0.057 Sum_probs=64.1
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
.++.+. +...+.....+...++..+.++..+|-.|.|++-.+.++..+..+...+. ... .+..
T Consensus 280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~----~~~------------~~~~ 343 (438)
T PRK09952 280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMA----LEA------------QSIF 343 (438)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH----HHc------------CChH
Confidence 344453 33333334444455555666777666555555545544433333222111 000 0011
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
.......++..+..+...++.+.+.-+.+|++.|....|+.+.+.+.+|...+|.+.|++
T Consensus 344 ~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l 403 (438)
T PRK09952 344 WIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAAL 403 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 111111222233333333444444445688888998999988888888888899988875
No 107
>PRK03893 putative sialic acid transporter; Provisional
Probab=88.90 E-value=0.13 Score=44.72 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=69.9
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
+++.+. +.|.+.+.+.++..++.++.+++.+|..|.|++..+.++.+++.+..... .+ ...
T Consensus 305 ~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~-------------~~~ 366 (496)
T PRK03893 305 DLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI-----GG-------------ANV 366 (496)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc-----cc-------------cHH
Confidence 556675 99999999999999999999998776444445444554444443322111 00 011
Q ss_pred HHHHHHHHHHHHHhhcCccCce-eEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNT-IIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~-~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+ ......+.....+.+..+.. ++....+++++++..+|+.+.+.. +|...||.+.|++
T Consensus 367 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~g~~lgp~l~g~l 425 (496)
T PRK03893 367 W-VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGA-LGGALAPILGALI 425 (496)
T ss_pred H-HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhh-HHHHHHHHHHHHH
Confidence 1 11111112212233332222 222346788899999999887665 5777788888764
No 108
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=88.73 E-value=0.13 Score=35.14 Aligned_cols=61 Identities=16% Similarity=0.158 Sum_probs=48.0
Q ss_pred cccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccccccc
Q psy10696 30 DDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYT 90 (174)
Q Consensus 30 ~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~ 90 (174)
...+++.+++. +.|.+.+.+.+|.++|.+..++.-.+.++.|.+-.+.+...+..+..+++
T Consensus 16 P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 16 PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567778885 99999999999999999999987776677777777777777666655543
No 109
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=88.68 E-value=0.16 Score=44.66 Aligned_cols=135 Identities=19% Similarity=0.180 Sum_probs=80.1
Q ss_pred HHHHHHHHHhhcccccccceeeeeeccc--ccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDN--VRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~--~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~ 81 (174)
.+..++.++.|.- ....+...+.+.+. +.....++ +.+.+.+.+.++..++.++.+.+.+|-.|-+.+-++.++..
T Consensus 19 ~~~~~~~~~~g~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~ 97 (502)
T TIGR00887 19 VIAGVGFFTDSYD-LFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMI 97 (502)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 3455566666663 33333333333321 11233454 78999999999999999999999887433334456777777
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCcee----EEeeecCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTI----IQFRCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~----lgl~~V~~~~sslylGi~~~~ 157 (174)
+++++..+.+. . .+. . .+ ..++++.++.|++....++ ...+..|+++|+.+.++.+..
T Consensus 98 v~~~~~~~~~~---~----------~~~-~---~~-~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~ 159 (502)
T TIGR00887 98 IATVASGLSPG---S----------SPK-S---VM-ATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAM 159 (502)
T ss_pred HHHHHHHHccC---c----------ccc-h---HH-HHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHH
Confidence 77665544210 0 001 0 01 1234556666666654443 334578999999999988764
Q ss_pred H
Q psy10696 158 G 158 (174)
Q Consensus 158 ~ 158 (174)
.
T Consensus 160 ~ 160 (502)
T TIGR00887 160 Q 160 (502)
T ss_pred H
Confidence 3
No 110
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=88.65 E-value=0.15 Score=44.14 Aligned_cols=144 Identities=9% Similarity=0.087 Sum_probs=74.3
Q ss_pred HHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC-Ccceee-e-ehhhhhhhhc
Q psy10696 9 ISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG-HKTKWV-A-LGSIIMSIGC 84 (174)
Q Consensus 9 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~-~~prwi-g-~g~l~~~~g~ 84 (174)
+..++......++......|+. ++++.+. +.+.+...+.++..++.++.+++.+|- +++|+. . +...+..++.
T Consensus 260 l~~~~~~~~~~~~~~~~P~~l~---~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~ 336 (452)
T PRK11273 260 IANVFVYLLRYGILDWSPTYLK---EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIAT 336 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHH
Confidence 3343433333334444445553 3355664 888888888888888888888887753 333432 1 1122222222
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccC
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFI 164 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~I 164 (174)
+..... . .++.......++.++....+.. ........+.+|+++++.+.|+...+..+-+.+
T Consensus 337 ~~~~~~-----~------------~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 398 (452)
T PRK11273 337 IVYWLN-----P------------AGNPTVDMACMIVIGFLIYGPV-MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSV 398 (452)
T ss_pred HHHHHh-----c------------ccChHHHHHHHHHHHHHHHhHH-HHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHH
Confidence 211111 0 0011111122222333222111 011122346788999999999998877666566
Q ss_pred cchhhhhcc
Q psy10696 165 PGPIIYGAL 173 (174)
Q Consensus 165 P~Pi~fG~~ 173 (174)
-+|.+.|++
T Consensus 399 ~g~~v~g~l 407 (452)
T PRK11273 399 AASAIVGYT 407 (452)
T ss_pred hhhhhHHHH
Confidence 678888764
No 111
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=88.63 E-value=0.14 Score=43.24 Aligned_cols=139 Identities=16% Similarity=0.178 Sum_probs=78.4
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~ 85 (174)
+++..++.+.+...+.+....|++| .+.+. +.|.+.+...++..+...+.....+|.++.|.+.++.+..+++.+
T Consensus 210 ~~~~~~l~~~~~~~~~~~~~~~~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~ 285 (382)
T PRK11128 210 FLLCVSLLQGSHAAYYGFSAIYWQA----AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWG 285 (382)
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHH----CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 3444455445455556666667743 35564 889988877777777777776665553333444556666555443
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee---ecCCCCchhHHHHHHHHHHhhc
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR---CVSPEDKSLSIGITEALGCGLA 162 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~---~V~~~~sslylGi~~~~~rllg 162 (174)
+..+. ++.+. +.+.+++.|++..-.++...+ ..+++++..+.+.........|
T Consensus 286 ~~~~~--------------------~~~~~----~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 341 (382)
T PRK11128 286 LMGST--------------------TALPW----LIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGS 341 (382)
T ss_pred HHHhh--------------------hhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHH
Confidence 33221 01121 133555556554333332222 2455556667777766666677
Q ss_pred cCcchhhhhcc
Q psy10696 163 FIPGPIIYGAL 173 (174)
Q Consensus 163 ~IP~Pi~fG~~ 173 (174)
...||++.|++
T Consensus 342 ~~ig~~i~G~l 352 (382)
T PRK11128 342 IAIMTVLSGFL 352 (382)
T ss_pred HHHHHHHHHHH
Confidence 77788888765
No 112
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=88.53 E-value=0.62 Score=38.28 Aligned_cols=58 Identities=21% Similarity=0.250 Sum_probs=48.1
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhc
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSY 62 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~ 62 (174)
..++++|+++|++.+...+...+++.|..++.+.+...+.......+|+.++..+...
T Consensus 97 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~ 154 (394)
T TIGR00883 97 ILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLL 154 (394)
T ss_pred HHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999888888888888887777778888888888888888766544
No 113
>KOG2533|consensus
Probab=88.41 E-value=0.34 Score=43.42 Aligned_cols=84 Identities=20% Similarity=0.237 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc-------CCCCCcceeeeeh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL-------GGKGHKTKWVALG 76 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~-------g~~~~~prwig~g 76 (174)
+-.+++.|+++|+.+++.++-.+.++..--||.+.....|+..++..+|++++.++.+.+ +-.+||=-++--|
T Consensus 134 ~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G 213 (495)
T KOG2533|consen 134 FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG 213 (495)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH
Confidence 345778899999999999999999999999988888899999999999999999988874 2234554445566
Q ss_pred hhhhhhhcccc
Q psy10696 77 SIIMSIGCFLR 87 (174)
Q Consensus 77 ~l~~~~g~~l~ 87 (174)
.+.+..|-+.+
T Consensus 214 ~i~~~~gi~~f 224 (495)
T KOG2533|consen 214 VITLVLGIVVF 224 (495)
T ss_pred HHHHHHHheEE
Confidence 66666554444
No 114
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=88.13 E-value=0.11 Score=44.75 Aligned_cols=143 Identities=13% Similarity=0.167 Sum_probs=74.7
Q ss_pred HHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh---hc
Q psy10696 9 ISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI---GC 84 (174)
Q Consensus 9 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~---g~ 84 (174)
+..+++..+..++.+....|+++ ..+.+. +.+.+.+.+.++..++..+.+++.+|..+.|+.-.+.+...+ +.
T Consensus 258 ~~~~~~~~~~~~~~~~~p~~l~~---~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 334 (438)
T TIGR00712 258 IANVFVYLLRYGVLDWSPTYLKE---VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAV 334 (438)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH---ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHH
Confidence 34444444434444555555543 245564 888888888888888888888877663222222222222211 11
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCc-eeEEeeecCCCCchhHHHHHHHHHHhhcc
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGN-TIIQFRCVSPEDKSLSIGITEALGCGLAF 163 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~-~~lgl~~V~~~~sslylGi~~~~~rllg~ 163 (174)
+..... . . .+....+..++.++... .+..+. .....+..++++++.+.|+.+....+.|.
T Consensus 335 ~~~~~~-----~---~---------~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~ 395 (438)
T TIGR00712 335 IVYWMN-----P---A---------GNPLVDMICMIVIGFLI--YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGS 395 (438)
T ss_pred HHHHhc-----C---C---------CchHHHHHHHHHHHHHH--ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhh
Confidence 111110 0 0 00011122222233211 111111 11233567889999999999887777667
Q ss_pred Ccchhhhhcc
Q psy10696 164 IPGPIIYGAL 173 (174)
Q Consensus 164 IP~Pi~fG~~ 173 (174)
..+|.+.|++
T Consensus 396 ~~gp~l~G~l 405 (438)
T TIGR00712 396 VAASAIVGYT 405 (438)
T ss_pred hhcchhHHHH
Confidence 8899988865
No 115
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=88.13 E-value=0.56 Score=39.83 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=68.9
Q ss_pred cCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC-----CcceeeeehhhhhhhhcccccccccccCCCCccccCCCCC
Q psy10696 34 RKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG-----HKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPA 107 (174)
Q Consensus 34 ~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~-----~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~ 107 (174)
+.++.+. +.|.+.+..-+..++..++.+++.+|. +|-+|+-++.++.+++.+...+... .. .
T Consensus 28 ~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~--~~---~------- 95 (437)
T TIGR00792 28 DVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD--FS---A------- 95 (437)
T ss_pred HccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC--CC---c-------
Confidence 3567775 999999999999999999999997752 2223787888888877666544310 00 0
Q ss_pred CccchhHHHHHHHHHHHHHhhcCccCceeEEeeec-CCCCchhHHHHHHH
Q psy10696 108 DCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCV-SPEDKSLSIGITEA 156 (174)
Q Consensus 108 ~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V-~~~~sslylGi~~~ 156 (174)
......+....++..+...+...|...+..+-. ++++|+...+....
T Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~ 143 (437)
T TIGR00792 96 --TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRF 143 (437)
T ss_pred --chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHH
Confidence 011122222223334455555677777665543 56788888776654
No 116
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=87.90 E-value=0.27 Score=42.04 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=31.3
Q ss_pred cCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 132 AGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 132 tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
.+..++..+.+|+++++.++|+... ..-+|..-||.+.|++
T Consensus 316 p~~~~~~~~~~p~~~~g~~~g~~~~-~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 316 PARETLSASLADARARGSYMGFSRL-GLALGGAIGYIGGGWL 356 (400)
T ss_pred ccHHHHHHhcCCcccchhhhhHHHH-HHHHHHHhcccchHHH
Confidence 3444555568999999999998766 5666888888888875
No 117
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=87.88 E-value=0.4 Score=42.08 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLV 59 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~ 59 (174)
..++++|++||++.++.++.+.+++.|..++.+.....++......+|..++..+
T Consensus 119 ~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 119 ILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999999999999999999998876666666777776666666665543
No 118
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=87.29 E-value=0.41 Score=40.67 Aligned_cols=145 Identities=15% Similarity=0.121 Sum_probs=76.7
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~ 85 (174)
.+++..++..++.........-+.++. .+.+.+.+.+.+...++..++.++.+.+.+|-.|.+.+-++.++.+++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~ 302 (437)
T TIGR00792 226 ILCLAYLFYNLAFNIKNGVQVYYFTYV---LGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYL 302 (437)
T ss_pred HHHHHHHHHHHHHHHHcchhheeEeee---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 344555555554444433333344322 22234667777777888888888888877664444544556666666555
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecC-------CCCchhHHHHHHHHH
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVS-------PEDKSLSIGITEALG 158 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~-------~~~sslylGi~~~~~ 158 (174)
...+.+ + + .+.+....++..+..+......+++.-+.+| ++.++.+.|+.....
T Consensus 303 ~~~~~~----~--------------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 363 (437)
T TIGR00792 303 IFFFAG----S--------------N-LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVR 363 (437)
T ss_pred HHHHcc----h--------------h-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHH
Confidence 443321 0 1 1122222223333333333333333333333 456788999888754
Q ss_pred HhhccCcchhhhhcc
Q psy10696 159 CGLAFIPGPIIYGAL 173 (174)
Q Consensus 159 rllg~IP~Pi~fG~~ 173 (174)
-+|...+|.+.|++
T Consensus 364 -~~g~~lg~~i~g~l 377 (437)
T TIGR00792 364 -KLGQALAGFLVGLI 377 (437)
T ss_pred -HHHHHHHHHHHHHH
Confidence 44666777777764
No 119
>PRK03699 putative transporter; Provisional
Probab=87.20 E-value=0.12 Score=43.82 Aligned_cols=72 Identities=13% Similarity=0.111 Sum_probs=44.3
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
.++.++...++.++.+....|++ ++++.+. +.|.+.+.+.++..++.++.+++.+|-++-|++-...++.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~p~~l~---~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 211 AIAALLYILAQLTFISWVPEYAQ---KKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALV 283 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 34444444444444555556663 3557775 889999999999999999988887653333444333333333
No 120
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=86.59 E-value=0.18 Score=44.20 Aligned_cols=106 Identities=15% Similarity=0.008 Sum_probs=65.9
Q ss_pred eecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCC
Q psy10696 28 YLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACP 106 (174)
Q Consensus 28 ~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~ 106 (174)
.++.++++++.+. +.|.+.+.+-++..++.++.+++.+|-.+.+.+..+.++.+++.++..+.+
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--------------- 122 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS--------------- 122 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc---------------
Confidence 3456678888886 999999999999999999999888764433455667777776655443320
Q ss_pred CCccchhHHHHHHHHHHHHHhhcCccCc---eeEEeeecCCCCchhHHHHHHHH
Q psy10696 107 ADCGSHFMWFIFILCLLNFFSATGRAGN---TIIQFRCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 107 ~~C~~~~~~f~~lf~~~q~l~g~g~tP~---~~lgl~~V~~~~sslylGi~~~~ 157 (174)
+ ...+. +..++.|++.+.. ....-+..++++|+.+.|+....
T Consensus 123 ----s-~~~l~----~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~ 167 (476)
T PLN00028 123 ----S-ATGFI----AVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGW 167 (476)
T ss_pred ----C-HHHHH----HHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHH
Confidence 1 11111 1223334333321 11112357788999999987653
No 121
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=86.50 E-value=0.2 Score=43.05 Aligned_cols=123 Identities=9% Similarity=-0.089 Sum_probs=64.4
Q ss_pred cCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccch
Q psy10696 34 RKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSH 112 (174)
Q Consensus 34 ~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~ 112 (174)
+.++.+. +.+.+.+...+...++..+.+++.+|-+|.|++-++.++.++..+...+. ... . + +
T Consensus 272 ~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---~~~---~-------~--~- 335 (432)
T PRK10406 272 NTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA---LQN---V-------S--S- 335 (432)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH---HHc---C-------C--c-
Confidence 4456665 77888887777777777777887776554454433333222222111100 000 0 0 0
Q ss_pred hHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 113 FMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 113 ~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
....+.+..++.+..+....+.+...-+..|+|.|+.+.|+.+.+.+++.....|.+.++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~ 395 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS 395 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH
Confidence 111111122233333332233333333568899999999999998887533346766553
No 122
>PRK03545 putative arabinose transporter; Provisional
Probab=85.74 E-value=0.21 Score=42.11 Aligned_cols=62 Identities=15% Similarity=0.295 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+.++|+++|++.+.+++...++++|..++.+.....|+......+|.+++..+..+..+
T Consensus 97 ~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 97 FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34567889999999988888888888888776666678888888888888888777766543
No 123
>KOG0254|consensus
Probab=84.65 E-value=0.97 Score=40.03 Aligned_cols=80 Identities=13% Similarity=0.238 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCC--CCc-ceee-eehhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGK--GHK-TKWV-ALGSII 79 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~--~~~-prwi-g~g~l~ 79 (174)
+..+.++|+++|+|.+....+...|++|+.++...............+|..++++........ +|| +-|+ .+..++
T Consensus 142 ~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~ 221 (513)
T KOG0254|consen 142 WYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVI 221 (513)
T ss_pred HHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999876555677777777777777775555544332 344 2223 255555
Q ss_pred hhhh
Q psy10696 80 MSIG 83 (174)
Q Consensus 80 ~~~g 83 (174)
..++
T Consensus 222 ~~~~ 225 (513)
T KOG0254|consen 222 LALG 225 (513)
T ss_pred HHHH
Confidence 5555
No 124
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=84.31 E-value=0.29 Score=43.77 Aligned_cols=141 Identities=16% Similarity=0.142 Sum_probs=83.6
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC-Ccceeeeehhhhhhhhcc
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG-HKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~-~~prwig~g~l~~~~g~~ 85 (174)
+..++......-+..++-..|+. +.++.+. +.+.+.+.+.....++.++.+++.+|- .|-|.+-+|.+++++|.+
T Consensus 15 ~~~~~~e~fs~Yg~~~~L~~yL~---~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~l 91 (493)
T PRK15462 15 VALQIWEYFSFYGMRALLILYLT---NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHV 91 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHH
Confidence 33344444433334444455553 3467775 899999999999999999999998874 333456678888888776
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCc-cC-ceeEEeeecCCC--CchhHHHHHHHHHHhh
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGR-AG-NTIIQFRCVSPE--DKSLSIGITEALGCGL 161 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~-tP-~~~lgl~~V~~~--~sslylGi~~~~~rll 161 (174)
+...++ . . .. ..+.. ++....|.|. .| ..++.-+..+++ +|.-+.++.+...+ +
T Consensus 92 ll~~~~-------~---------~-~~-~~~l~---l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~n-l 149 (493)
T PRK15462 92 VLGASE-------I---------H-PS-FLYLS---LAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGN-V 149 (493)
T ss_pred HHHHhh-------c---------c-hh-HHHHH---HHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHH-H
Confidence 443210 0 0 01 11211 1122233332 12 222222334443 58888999999888 5
Q ss_pred ccCcchhhhhcc
Q psy10696 162 AFIPGPIIYGAL 173 (174)
Q Consensus 162 g~IP~Pi~fG~~ 173 (174)
|...+|++.|++
T Consensus 150 G~~iap~l~g~L 161 (493)
T PRK15462 150 GSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHH
Confidence 888899988875
No 125
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=84.13 E-value=0.7 Score=39.84 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSS 61 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s 61 (174)
..++++|+++|++.++.++...+++.|..++.+.....|.......+|..++.+...
T Consensus 121 ~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~ 177 (479)
T PRK10077 121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNY 177 (479)
T ss_pred HHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999999999988888776666778877777777777655433
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=83.71 E-value=0.19 Score=41.58 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=23.4
Q ss_pred cCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 142 VSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 142 V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
..|+++..+.|+.....+ +|...+|.+.|++
T Consensus 316 ~~~~~~~~~~~~~~~~~~-~g~~~g~~~~g~~ 346 (375)
T TIGR00899 316 LMPGRAGAATTLYTNTGR-VGWIIAGSVGGIL 346 (375)
T ss_pred hCcchhhHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 345566788999887666 7888889888864
No 127
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=83.10 E-value=0.72 Score=38.27 Aligned_cols=62 Identities=16% Similarity=0.067 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccC
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLG 64 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g 64 (174)
++..++++-++.|.|.+-.-+..-+|+.++.++.+.+...++..+++.+|..++.++.+.+-
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46789999999999999999999999998887776667999999999999999999988764
No 128
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=82.99 E-value=0.37 Score=42.34 Aligned_cols=121 Identities=12% Similarity=-0.014 Sum_probs=61.5
Q ss_pred cCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhccc-ccccccccCCCCccccCCCCCCccc
Q psy10696 34 RKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFL-RTYTNCSCIPNGMATQGACPADCGS 111 (174)
Q Consensus 34 ~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l-~~l~~c~c~~~~~~~~~~C~~~C~~ 111 (174)
+.++.+. +.+.+.+...++..++.++.+.+.+|-.|.+.+-++.+...++++. .... .. ++
T Consensus 279 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----~~-------------~~ 341 (490)
T PRK10642 279 HNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI----NS-------------NV 341 (490)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH----hC-------------CC
Confidence 3445564 6666777788888888888888776633333333333322222211 1000 00 00
Q ss_pred hhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 112 HFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 112 ~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
....+...+ +..+..+.+..+.....-+..|++.|+..+|+.+.+.++.| ..+|.+.|++
T Consensus 342 ~~~~~~~~~-~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g-~~~p~i~g~l 401 (490)
T PRK10642 342 IGLIFAGLL-MLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA-GLTPTLAAWL 401 (490)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 001111111 11222222222222222246788999999998777777765 5678777754
No 129
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=82.13 E-value=0.9 Score=40.50 Aligned_cols=155 Identities=12% Similarity=0.173 Sum_probs=85.8
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-----CCcceeeeehhhhh
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-----GHKTKWVALGSIIM 80 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-----~~~prwig~g~l~~ 80 (174)
+.++....|+-.+ +++-.++++-+.+..+.+. +.+.+.....+..++...+++++.+| ++|..|+..|.+..
T Consensus 7 i~~~~~~~Giq~~--~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 7 LRVASVAAGVQFG--WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 3444444444211 3333333333334456675 99999999999999999999999874 45555766556665
Q ss_pred hhhcccccccccccCCCCccccCCCCCCccc-hhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCc--hhHHHHHHHH
Q psy10696 81 SIGCFLRTYTNCSCIPNGMATQGACPADCGS-HFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDK--SLSIGITEAL 157 (174)
Q Consensus 81 ~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~-~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~s--slylGi~~~~ 157 (174)
.++.++..+....... ..++. ++.... ....++..+.+..+...+-+.|...+.-+.++++++ ..+.+++..+
T Consensus 85 ~~~l~ll~~~~~~~~~---~~~~~-~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~ 160 (477)
T TIGR01301 85 AFAVILIGFAADIGHL---FGDNL-DKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFF 160 (477)
T ss_pred HHHHHHHHhCchhhhh---ccccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHH
Confidence 5555544432211100 00000 001111 112334444556677777788988888888888765 4677766543
Q ss_pred HHhhccCcchh
Q psy10696 158 GCGLAFIPGPI 168 (174)
Q Consensus 158 ~rllg~IP~Pi 168 (174)
. -+|.+.|+.
T Consensus 161 ~-~lG~ilg~~ 170 (477)
T TIGR01301 161 M-AIGNVLGYA 170 (477)
T ss_pred H-HHHHHHHHH
Confidence 3 334444443
No 130
>PRK12382 putative transporter; Provisional
Probab=81.84 E-value=0.57 Score=39.38 Aligned_cols=60 Identities=17% Similarity=0.117 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
+..+.++|+++|++.+...+...+++.|..++.+...-.|........|.+++..+..+.
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 112 FALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999877766655555555544455555555555555555555555443
No 131
>PRK12307 putative sialic acid transporter; Provisional
Probab=81.67 E-value=0.72 Score=39.11 Aligned_cols=59 Identities=17% Similarity=0.306 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSY 62 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~ 62 (174)
+..+.++|+++|++.+..++...+++.|..++.+.+...|+......+|+.++..+..+
T Consensus 106 ~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 106 VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 44678899999999999888888888887776666667777777778887777665544
No 132
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=80.83 E-value=0.83 Score=40.02 Aligned_cols=146 Identities=18% Similarity=0.119 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhh
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~ 81 (174)
+++.....-++-|+. ..+...-+....+-|+++. |.+.+..++--|..+..+.-+++..|-...|=+-+|..+++
T Consensus 14 ~~v~~t~lFfl~G~~----~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~a 89 (422)
T COG0738 14 AFVLLTSLFFLWGFI----TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYA 89 (422)
T ss_pred HHHHHHHHHHHHHHH----hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHH
Confidence 445555555666663 2344556667788999996 99999999999999999999998887555566668888888
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeee----cCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRC----VSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~----V~~~~sslylGi~~~~ 157 (174)
+||.++.= +. + ......|..+-++.+.|.+-+-|-+-.+ =|+++.+.=+.+...
T Consensus 90 vg~~lF~p----------Aa---------~--~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~- 147 (422)
T COG0738 90 VGAALFWP----------AA---------S--SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQA- 147 (422)
T ss_pred HHHHHHhh----------hh---------h--hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHH-
Confidence 99887630 00 0 0122234566777777777766666554 345566777777776
Q ss_pred HHhhccCcchhhhhccC
Q psy10696 158 GCGLAFIPGPIIYGALL 174 (174)
Q Consensus 158 ~rllg~IP~Pi~fG~~i 174 (174)
..=+|.+.+|++-+++|
T Consensus 148 fn~lGa~~gp~~g~~li 164 (422)
T COG0738 148 FNGLGAILGPLLGSSLI 164 (422)
T ss_pred hhhhHHHHHHHHHHHHH
Confidence 45568888888877653
No 133
>PRK15075 citrate-proton symporter; Provisional
Probab=80.55 E-value=1.5 Score=37.76 Aligned_cols=57 Identities=12% Similarity=0.135 Sum_probs=43.1
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSY 62 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~ 62 (174)
.++++|+++|++.+..++....++.|..++.+.....++......+|..++..+...
T Consensus 119 ~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 119 LVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred HHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999998888777888888887777777777777666665555444443
No 134
>KOG2532|consensus
Probab=80.07 E-value=1.4 Score=39.10 Aligned_cols=59 Identities=19% Similarity=0.319 Sum_probs=50.4
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccC
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLG 64 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g 64 (174)
.+++.|++||++++..++..-..+..-.++.+.+...+++.+..++|+++.....+++-
T Consensus 130 ~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc 188 (466)
T KOG2532|consen 130 LLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLC 188 (466)
T ss_pred hhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 56899999999999988888777777777777777999999999999999998888664
No 135
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=79.97 E-value=0.39 Score=39.82 Aligned_cols=112 Identities=16% Similarity=0.262 Sum_probs=66.0
Q ss_pred CCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcce-eeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 36 NKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTK-WVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 36 ~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~pr-wig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
++.+. +.|.+.+.+.++..++.++.+...+|-++.| .+..+.++.+++.+...+. . . +..
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-----~------------~-~~~ 288 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA-----P------------M-HGL 288 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh-----h------------h-hHH
Confidence 45564 8999999999999999999998877653434 4455666666655443322 0 0 001
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEE-----eeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQ-----FRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lg-----l~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
..+ ..+.|++....++.. .+..++++++.+.|+.+.+.. ++...+|.+.|++
T Consensus 289 ~~~-------~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~gp~~~G~l 345 (355)
T TIGR00896 289 WAW-------ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGY-LLAALGPLFVGVL 345 (355)
T ss_pred HHH-------HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 111 123345554444332 233445666777787665433 3456688888875
No 136
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=79.78 E-value=0.99 Score=31.05 Aligned_cols=60 Identities=25% Similarity=0.357 Sum_probs=48.2
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
.+.+.+++.|.+.+...+...+++.|..++.+.+...+.......+|..++....+...+
T Consensus 53 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 53 VLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 456678899998888888887888888777777778888888889999888888777654
No 137
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=79.32 E-value=0.92 Score=43.96 Aligned_cols=62 Identities=15% Similarity=0.204 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+++++++||++.+.+.+...+.+.|+.++.+...-.|+..+...+|.+++.++.+++..
T Consensus 108 ~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~ 169 (1140)
T PRK06814 108 VPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI 169 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44677899999999999999999999999999888888899999999999999888888754
No 138
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=79.27 E-value=0.9 Score=38.99 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+.++|++||++.+...+....++.|..++.+.....+.+.+...+++.++.++.++..+
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999998875555555566666665555567888888888888888777766543
No 139
>PRK11010 ampG muropeptide transporter; Validated
Probab=78.79 E-value=0.35 Score=42.71 Aligned_cols=138 Identities=12% Similarity=0.054 Sum_probs=77.5
Q ss_pred cccccccceeeeeecccccCCCchh-HHHHHHH-HHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccc
Q psy10696 16 IGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSS-AWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCS 93 (174)
Q Consensus 16 ~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~-~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~ 93 (174)
++.....+...+++. ++.+.+. +.|.+.. ...++..++.++.+.+.+|-.+.|++-++.++.++..+.+..-.
T Consensus 236 ~~~~~~~~~~~~~l~---~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~-- 310 (491)
T PRK11010 236 LGDAFAMSLTTTFLI---RGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLS-- 310 (491)
T ss_pred HHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 333333444445553 2456675 8888874 55678888888888887765555555444444444333221100
Q ss_pred cCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 94 CIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 94 c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
-.+ ++ .+......++.++..|++.+..++...+.++++.++...|+.+... -+|.+.+|.+.|++
T Consensus 311 ~~~-------------~~-~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~-~lg~~~~~~~~G~l 375 (491)
T PRK11010 311 ITD-------------KN-LYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALS-AVGRVYVGPVAGWF 375 (491)
T ss_pred hcc-------------cc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 000 01 1112223344455567677777777677888888888888887765 34544444556654
No 140
>PRK11010 ampG muropeptide transporter; Validated
Probab=78.54 E-value=0.67 Score=40.94 Aligned_cols=142 Identities=15% Similarity=0.182 Sum_probs=69.7
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC------CCcceeeeehhh
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK------GHKTKWVALGSI 78 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~------~~~prwig~g~l 78 (174)
.++..-+.||+....... .+....++.+.+. ++|.+. ...... +.-.+.+.+.+| ++|++|+-.+.+
T Consensus 16 ~~~~l~~~~gl~~~~~~~----~l~~~l~~~g~~~~~ig~~~-~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 16 ILLILGFASGLPLALTSG----TLQAWMTVENIDLKTIGFFS-LVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHhCCCCHHHHHHHH-HHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 445555666664442222 2333345556774 777762 222222 233333444433 567778877777
Q ss_pred hhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHH
Q psy10696 79 IMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALG 158 (174)
Q Consensus 79 ~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~ 158 (174)
..+++....++.+ + . ++.+.+....++..+..+....+...+..+.+++|+|+.+.|+.....
T Consensus 90 ~~~~~~~~~a~~~----~------------~-~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~ 152 (491)
T PRK11010 90 LLLVAIAAMGFLE----P------------G-TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGY 152 (491)
T ss_pred HHHHHHHHHHHcC----C------------c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHH
Confidence 7766554443321 0 0 112222222222233333333333334445788899999999887644
Q ss_pred HhhccCcchhhhh
Q psy10696 159 CGLAFIPGPIIYG 171 (174)
Q Consensus 159 rllg~IP~Pi~fG 171 (174)
+ +|.+-+|.+.+
T Consensus 153 ~-lG~llg~~l~~ 164 (491)
T PRK11010 153 R-LAMLVSGGLAL 164 (491)
T ss_pred H-HHHHHHHHHHH
Confidence 3 34555554433
No 141
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=78.21 E-value=1.2 Score=38.39 Aligned_cols=60 Identities=15% Similarity=0.147 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
+..+++++++.|+|.+...+...+++.+..++.+.+...+...+.+.+|..++..+.+.+
T Consensus 94 ~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 94 YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566889999999999998888888887776655555688888888999988888887765
No 142
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=78.18 E-value=1.1 Score=38.14 Aligned_cols=62 Identities=23% Similarity=0.428 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+.+.|+++|++.+...+...+++.|..++.+.+.-.|...+...+|..++..+.++..+
T Consensus 108 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~ 169 (394)
T PRK10213 108 FSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE 169 (394)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45678899999999999888888888887776666677888888888888888887777654
No 143
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=77.96 E-value=0.71 Score=39.33 Aligned_cols=56 Identities=20% Similarity=0.262 Sum_probs=43.1
Q ss_pred HHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 8 LISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 8 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
.+.|++||++.+.+.+...+++.|+.++.+...-.|.+.....++.+++..+.+..
T Consensus 92 ~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 92 LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999998887777777777766666666555554433
No 144
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=77.16 E-value=0.24 Score=44.39 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=93.4
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-H-HHHHHHHHhhhhhhhhhhhhccCCCCCcce-eeeehhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-V-LGVMSSAWDVGTLASFLVSSYLGGKGHKTK-WVALGSIIMS 81 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~-~g~i~~~~~ig~~~~~~~~s~~g~~~~~pr-wig~g~l~~~ 81 (174)
.++|+..|+--+=.+ .++..+++. +.++++. + .|.+.+.+-.+.++..++++++.+| -++| ++.++.+.-+
T Consensus 30 ~~lC~fGF~~e~R~n--~s~a~p~L~---~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Ws 103 (511)
T TIGR00806 30 LYLCFYGFMAQFRPG--ESFITPYLL---TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFV 103 (511)
T ss_pred HHHHHHHHHHHhhch--HHHHHHHHH---HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHH
Confidence 346666666555222 344455554 4678886 8 9999999999999999999999875 3444 4466666655
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee----ecCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR----CVSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~----~V~~~~sslylGi~~~~ 157 (174)
+..++..+. ++ +..+.+.+++.|++.+|.+ ...+ .+|+++|+.+.|+...
T Consensus 104 l~t~L~~fa--------------------~S----l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~s- 157 (511)
T TIGR00806 104 CVWLLLLLG--------------------TS----VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRA- 157 (511)
T ss_pred HHHHHHHHH--------------------HH----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHH-
Confidence 555444332 11 1234568999999999988 4444 4999999999999876
Q ss_pred HHhhccCcchhhhhc
Q psy10696 158 GCGLAFIPGPIIYGA 172 (174)
Q Consensus 158 ~rllg~IP~Pi~fG~ 172 (174)
...+|.+.+|++.++
T Consensus 158 g~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 158 AVLLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHHHHHHHHHHH
Confidence 556667777766554
No 145
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=76.69 E-value=1.5 Score=38.33 Aligned_cols=128 Identities=10% Similarity=0.101 Sum_probs=72.2
Q ss_pred CCchh-HHHHHHHHHhhhhhhhhhhhhccC-CCC-----CcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCC
Q psy10696 36 NKMPV-VLGVMSSAWDVGTLASFLVSSYLG-GKG-----HKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPAD 108 (174)
Q Consensus 36 ~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g-~~~-----~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~ 108 (174)
.+.|. -.|.+.+...+-.-. -+..+|.. .|+ ||-.||=.|.++...|..+..+.--. .. ++..++
T Consensus 10 L~vpA~lv~~lval~~~~ap~-R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~-l~-~~~~~~----- 81 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAPL-RVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLL-LA-ESGQQS----- 81 (403)
T ss_pred hccHHHHHHHHHHHHHHHHHH-HHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHH-Hc-cccccc-----
Confidence 44553 555555554433322 33444442 334 66678888888888877664432100 00 000000
Q ss_pred ccchhHHHHHHHHHHHHHhh----cCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 109 CGSHFMWFIFILCLLNFFSA----TGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 109 C~~~~~~f~~lf~~~q~l~g----~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+...+....+-.+.-.+.| ..+||...+..+-++||+||...++.|. +-+.|.|.+.+++|.+
T Consensus 82 -~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~-Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 82 -SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWV-MLIVGIIVSAIVFGRL 148 (403)
T ss_pred -ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHH-HHHHHHHHHHHHHHHH
Confidence 1111222222223333444 4456666666678999999999999998 5678999999998875
No 146
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=76.68 E-value=0.49 Score=39.98 Aligned_cols=110 Identities=12% Similarity=0.073 Sum_probs=64.7
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHH
Q psy10696 40 VVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFI 119 (174)
Q Consensus 40 ~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~l 119 (174)
.+.|.+.+...+...++..+.+.+.+|..|.|++-++.++++++.....+.+ + .+..
T Consensus 254 ~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~-------------------~-~~~~--- 310 (396)
T TIGR00882 254 RVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT-------------------T-ALEV--- 310 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC-------------------C-hHHH---
Confidence 3788888888888888888887776665555666677776666554433210 1 1111
Q ss_pred HHHHHHHhhcCccCceeEEeee----cCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 120 LCLLNFFSATGRAGNTIIQFRC----VSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 120 f~~~q~l~g~g~tP~~~lgl~~----V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
.+.+++.|++..-......++ .+++.++...+..+....-+|.+.+|++.|++
T Consensus 311 -~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l 367 (396)
T TIGR00882 311 -VILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNM 367 (396)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHH
Confidence 234556666543222233333 34444444444434457777888888888875
No 147
>PRK09848 glucuronide transporter; Provisional
Probab=76.30 E-value=1.1 Score=38.61 Aligned_cols=145 Identities=12% Similarity=-0.001 Sum_probs=70.0
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~ 85 (174)
+++..++...+...+.+...-++.+ .++.+. +.+++....-++..++..+.+.+..|..|-|++.+|.++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~ 309 (448)
T PRK09848 233 LCIGALCVLISTFAVSASSLFYVRY---VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYL 309 (448)
T ss_pred HHHHHHHHHHHHHHHhhhheeeEee---ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3344444444333333333333332 334455 444444444566666777777666655555566677777777665
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecCCC-------CchhHHHHHHHHH
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPE-------DKSLSIGITEALG 158 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~-------~sslylGi~~~~~ 158 (174)
...+.+ + ++.+.+....++..+-.++...+...+..+.+|++ ..+.+.|+... .
T Consensus 310 ~~~~~~----~--------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~-~ 370 (448)
T PRK09848 310 LFFWVS----V--------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF-T 370 (448)
T ss_pred HHHHcC----c--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH-H
Confidence 554320 0 11122211112222222333333333333344433 35888888766 4
Q ss_pred HhhccCcchhhhhcc
Q psy10696 159 CGLAFIPGPIIYGAL 173 (174)
Q Consensus 159 rllg~IP~Pi~fG~~ 173 (174)
+-+|.-.|+.+.|.+
T Consensus 371 ~klg~aig~~i~g~~ 385 (448)
T PRK09848 371 RKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHHH
Confidence 446666677666653
No 148
>KOG2532|consensus
Probab=76.23 E-value=0.84 Score=40.54 Aligned_cols=103 Identities=19% Similarity=0.262 Sum_probs=72.1
Q ss_pred ccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCccee-eeehhhhhhhhcccccccccccCCCCccccCCCCCCcc
Q psy10696 33 VRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKW-VALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCG 110 (174)
Q Consensus 33 ~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prw-ig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~ 110 (174)
++++..++ +.|.+.++.-+|.+++.++..++.+| .-+|+ ++.+.++.+++.++.=+- .
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~a-------------------a 124 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLA-------------------A 124 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHH-------------------H
Confidence 56788886 99999999999999999999998765 33333 466666666665543211 0
Q ss_pred chhHHHHHHHHHHHHHhhcCccCcee----EEeeecCCCCchhHHHHHHHHH
Q psy10696 111 SHFMWFIFILCLLNFFSATGRAGNTI----IQFRCVSPEDKSLSIGITEALG 158 (174)
Q Consensus 111 ~~~~~f~~lf~~~q~l~g~g~tP~~~----lgl~~V~~~~sslylGi~~~~~ 158 (174)
+ +.|. .+++..++.|++.+..++ +--+..|++||+.++++.+...
T Consensus 125 ~--~~~~-~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~ 173 (466)
T KOG2532|consen 125 S--IGFY-LLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGS 173 (466)
T ss_pred H--hcch-hhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHH
Confidence 1 1111 235678888887765554 3345799999999999998733
No 149
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=76.05 E-value=1.6 Score=36.09 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLG 64 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g 64 (174)
+..+++.|+++|++.+...+...+++.|..++.+.....|.......+|..++..+.++..
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 153 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL 153 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999999888888888888877666666788888888888777777766553
No 150
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=75.78 E-value=0.89 Score=37.70 Aligned_cols=139 Identities=13% Similarity=0.051 Sum_probs=85.1
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
...++.++.--++.+..+....|++|. +.++.+. +.+...+.+-.+..++-.+...+.+|-.+.|.+.++.++..++.
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~-~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~ 222 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDP-HALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 344555555555777777777888542 2356664 88999999999999999998888777555666666655555554
Q ss_pred ccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHHh
Q psy10696 85 FLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGCG 160 (174)
Q Consensus 85 ~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~rl 160 (174)
++....+ + . ...+ +-++.|.+.++.++... +..+++ ...+-++. .+..
T Consensus 223 ~l~~~~~------~------------~-~~~~------~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~--~~~~ 274 (310)
T TIGR01272 223 IGAALTH------G------------Y-VAMW------FVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL--CLAI 274 (310)
T ss_pred HHHHHcC------C------------H-HHHH------HHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH--HHHH
Confidence 4333221 0 0 0111 12245566666666544 344433 33455553 3455
Q ss_pred hccCcchhhhhcc
Q psy10696 161 LAFIPGPIIYGAL 173 (174)
Q Consensus 161 lg~IP~Pi~fG~~ 173 (174)
+|+...|.+.|.+
T Consensus 275 ~Gg~i~P~l~G~l 287 (310)
T TIGR01272 275 VGGAIVPLLQGSL 287 (310)
T ss_pred hcchHHHHHHHHH
Confidence 8999999998875
No 151
>KOG2615|consensus
Probab=75.62 E-value=0.56 Score=41.03 Aligned_cols=130 Identities=22% Similarity=0.264 Sum_probs=80.8
Q ss_pred cccccceeeeeecccccCC-----CchhHHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeeeehhhhhhhhcccccccc
Q psy10696 18 SSTYWSLGVAYLDDNVRKN-----KMPVVLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVALGSIIMSIGCFLRTYTN 91 (174)
Q Consensus 18 ~~~~~~~~~~~i~~~~~~~-----~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig~g~l~~~~g~~l~~l~~ 91 (174)
.+.++.+...-++|...-. ....+.|++-|++.+...+.....+-+.++ ++||..+. |.+-.++.-++.+
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~-c~~~va~s~ll~~--- 116 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLA-CLIGVALSYLLWA--- 116 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHH-HHHHHHHHHHHHH---
Confidence 3445555555555543222 233599999999999999999888877654 77885432 1111111111100
Q ss_pred cccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccC---ceeEEeeecCCCCchhHHHHHHHHHHhhccCcchh
Q psy10696 92 CSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAG---NTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPI 168 (174)
Q Consensus 92 c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP---~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi 168 (174)
|++ .| ..|.++-++.|+-..- ..++.-.-++||++|+.++...+ .+=+|+|.||.
T Consensus 117 -----------------~S~---~F-~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~-a~~lGfilGPm 174 (451)
T KOG2615|consen 117 -----------------LSR---NF-AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGT-AFGLGFILGPM 174 (451)
T ss_pred -----------------HHH---HH-HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeeh-hhhcchhhcch
Confidence 112 34 4456678888875532 22222346889999999998876 67789999999
Q ss_pred hhhcc
Q psy10696 169 IYGAL 173 (174)
Q Consensus 169 ~fG~~ 173 (174)
+-|.+
T Consensus 175 IGgyl 179 (451)
T KOG2615|consen 175 IGGYL 179 (451)
T ss_pred hhhHH
Confidence 98864
No 152
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=75.09 E-value=2.9 Score=34.34 Aligned_cols=109 Identities=14% Similarity=0.151 Sum_probs=63.7
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchh
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHF 113 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~ 113 (174)
.++.+. +.|.+.+...+...++.++.+++.+|-.|.|.+-.+......+.++..+.. .. + ...
T Consensus 255 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~---~~-----~--------~~~ 318 (366)
T TIGR00886 255 QFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGL---VS-----P--------LSL 318 (366)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcC---CC-----c--------chH
Confidence 456664 888888888888888888888877663332322222223333322222210 00 0 012
Q ss_pred HHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHh
Q psy10696 114 MWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCG 160 (174)
Q Consensus 114 ~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rl 160 (174)
..+...+.+..+..|.+.++.+.+.-.. .|++++.+.|+...+.++
T Consensus 319 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 319 AVFIVLFVALFFFSGAGNGSTFALVPHI-FRRATGAVSGLVGAIGNL 364 (366)
T ss_pred HHHHHHHHHHHHHhccccchhhhcchhh-chhhcccHHHHHHHhccC
Confidence 3344445567778888888777654444 457899999988775543
No 153
>PRK10054 putative transporter; Provisional
Probab=75.03 E-value=0.85 Score=38.87 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=23.2
Q ss_pred ecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 141 CVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 141 ~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
.+|++.++.|.|.+. ..-+|...||.+.|++
T Consensus 326 ~~p~~~~~~~~~~~~--~~~~G~~~Gp~~~G~l 356 (395)
T PRK10054 326 IAPPGMKASYFSAQS--LGWLGAAINPLVSGVI 356 (395)
T ss_pred hCCcccceehHhHHH--HHHHHHHHHHHHHHHH
Confidence 467788888888654 3446888899888875
No 154
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=74.38 E-value=1.7 Score=38.58 Aligned_cols=78 Identities=13% Similarity=0.193 Sum_probs=52.3
Q ss_pred HHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeeeehhhhhhhhccc
Q psy10696 9 ISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVALGSIIMSIGCFL 86 (174)
Q Consensus 9 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig~g~l~~~~g~~l 86 (174)
..++....+.-+..++...|+. +.++.+. +.+.+.+.+.....+..++.+++++| -.|-|.+-+|.+++++|+++
T Consensus 21 ~~~~~er~~~y~~~~~l~~yl~---~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~ 97 (489)
T PRK10207 21 FVELWERFGYYGVQGILAVFFV---KQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFM 97 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 3344333433333444455553 4567775 78888888888888888889999887 44555667888888888877
Q ss_pred ccc
Q psy10696 87 RTY 89 (174)
Q Consensus 87 ~~l 89 (174)
..+
T Consensus 98 ~~~ 100 (489)
T PRK10207 98 TGM 100 (489)
T ss_pred HHH
Confidence 654
No 155
>PRK10133 L-fucose transporter; Provisional
Probab=74.11 E-value=1.8 Score=37.62 Aligned_cols=60 Identities=8% Similarity=0.115 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
+..++++|+++|+|.+...+...+++.|..++.+.....+...+.+.+|..++.++++..
T Consensus 117 ~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 117 YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999988888777776654443332357778888888888888776643
No 156
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=74.00 E-value=1.1 Score=38.12 Aligned_cols=66 Identities=15% Similarity=0.200 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCC-CCcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGK-GHKT 70 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~p 70 (174)
+..+.++|+++|++++.+.+ ..+.+.|..++.+...-.++......+|.+++.++......+ +||.
T Consensus 79 ~~~l~~~R~l~G~g~~~~~~-~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~ 145 (368)
T TIGR00903 79 YEWLLACQLLAALGQPFLLN-AFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQL 145 (368)
T ss_pred HHHHHHHHHHHHhHhHHHHH-HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 45788999999999886443 333334444444555678888888889999888777776432 4443
No 157
>KOG3764|consensus
Probab=73.74 E-value=1.6 Score=38.47 Aligned_cols=60 Identities=22% Similarity=0.315 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCc-hhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKM-PVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~-s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
+-+++++|.+||+|.+-..+.+.+.+-|...+.+- ++-.|++..+-.+|.+++..+++.+
T Consensus 159 y~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGil 219 (464)
T KOG3764|consen 159 YPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGIL 219 (464)
T ss_pred hHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccch
Confidence 34678999999999998888887776555444443 4578888888888888888888864
No 158
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=73.52 E-value=0.73 Score=40.61 Aligned_cols=161 Identities=17% Similarity=0.253 Sum_probs=91.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhh--hccCCC-CCcceeeeehhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVS--SYLGGK-GHKTKWVALGSIIM 80 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~--s~~g~~-~~~prwig~g~l~~ 80 (174)
.+...+-.++||+|..+-.. +|+.--.|.+..++.++-+.+.++|.++..++. .++..+ .||--++--|.+.+
T Consensus 121 ~~l~~lng~fQg~Gwpp~~~----~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiai 196 (448)
T COG2271 121 AVLWVLNGWFQGMGWPPCAR----TITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAI 196 (448)
T ss_pred HHHHHHHHHHhcCCCcHHHH----HHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 44556667888887766444 455555666667788999999999999999988 666544 45554443333333
Q ss_pred hhhcccccc-cc--ccc-CCC-----CccccC--CC-CCC--ccch-hH------HHHHHHHHHHHHhhcCc------cC
Q psy10696 81 SIGCFLRTY-TN--CSC-IPN-----GMATQG--AC-PAD--CGSH-FM------WFIFILCLLNFFSATGR------AG 133 (174)
Q Consensus 81 ~~g~~l~~l-~~--c~c-~~~-----~~~~~~--~C-~~~--C~~~-~~------~f~~lf~~~q~l~g~g~------tP 133 (174)
.++-+..-+ .| -+| .++ ++..+. +- +.+ ..++ +. .++.++.++.++.-+-. +|
T Consensus 197 ival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p 276 (448)
T COG2271 197 IVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGP 276 (448)
T ss_pred HHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 333333221 11 111 110 000000 00 000 0000 00 12234456666655443 56
Q ss_pred ceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 134 NTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 134 ~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
+|..-....++++...+..+... |.+||+++.||+
T Consensus 277 ~YL~e~k~~s~~~a~~a~~lfE~-----agl~G~Ll~Gwl 311 (448)
T COG2271 277 LYLSEVKGFSLVKANWAISLFEV-----AGLPGTLLAGWL 311 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHH-----HhhHHHHHHHHH
Confidence 66555556777888888888887 999999999986
No 159
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=72.43 E-value=2 Score=36.03 Aligned_cols=52 Identities=19% Similarity=0.108 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLA 55 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~ 55 (174)
+..+++.|+++|++.+...+...+++.|..++.+.....|.......+|..+
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 112 LLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 3457889999999998877766555544444333343444443333333333
No 160
>PTZ00207 hypothetical protein; Provisional
Probab=72.31 E-value=0.57 Score=42.88 Aligned_cols=145 Identities=12% Similarity=0.081 Sum_probs=79.0
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCccee-eeehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKW-VALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prw-ig~g~l~~~ 81 (174)
|..+..+-+.|..... -+... .+-.++.++++.+. +.+.+.+.... .....++.+++.+| .-||+ +.+|.++.+
T Consensus 27 w~~lva~~~~~~~~g~-~y~fs-v~s~~L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr-~G~R~vllig~ll~~ 102 (591)
T PTZ00207 27 FALLVLGAFCSICTSF-MYAFN-LISGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDY-LGPRPIFVLSMTVFC 102 (591)
T ss_pred HHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHH-hCcHHHHHHHHHHHH
Confidence 3444444454444322 23333 23356778899985 88887754222 12223344444443 33444 468889999
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~ 157 (174)
+|.++.++. .+ +. ...+.+ .+++...+.|.|.++.++... ++- |++|+.++|+....
T Consensus 103 iG~ll~ala----~~-~~---------i~~s~~----~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~ 163 (591)
T PTZ00207 103 LGTLLFALT----FQ-EV---------IEGSVV----RLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTF 163 (591)
T ss_pred HHHHHHHHH----hc-cc---------ccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHH
Confidence 998887663 10 00 001112 123345566666665554333 233 68899999999887
Q ss_pred HHhhccCcchhhhh
Q psy10696 158 GCGLAFIPGPIIYG 171 (174)
Q Consensus 158 ~rllg~IP~Pi~fG 171 (174)
..+=+.+-+|++.+
T Consensus 164 ~gLGsaI~~~l~~~ 177 (591)
T PTZ00207 164 TGLGSAILGSIQLA 177 (591)
T ss_pred HHHHHHHHHHHHHH
Confidence 66555555555544
No 161
>PRK03633 putative MFS family transporter protein; Provisional
Probab=72.25 E-value=1.9 Score=36.20 Aligned_cols=62 Identities=19% Similarity=0.177 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+.++|+++|++.+...+...+.+.|..++.+.....|...+...+|..++..+.++...
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 94 FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34567889999999887766554444333333344557788888888888888888877643
No 162
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=71.61 E-value=1.6 Score=38.53 Aligned_cols=139 Identities=19% Similarity=0.294 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeeeehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig~g~l~~~ 81 (174)
++.|++++++--=|.++..+.+..+- ..++++++ +...+-..-++..+.+.++.++++.| +.||... .+..+..
T Consensus 254 i~~FLiA~~~~~DGv~til~~~~~fg---~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~-~~lvi~~ 329 (438)
T COG2270 254 LVLFLIARFFYIDGVNTILAMGGVFG---AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM-IGLVILS 329 (438)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHH---HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh-HHHHHHH
Confidence 56889999999889999888887554 23899997 99999999999999999999998876 5564332 2222222
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGITEAL 157 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi~~~~ 157 (174)
+-++.-.+. + .+. .| ++.-++.|....|.+... .|.|||++.+-+.|++...
T Consensus 330 ~~~~~~~~~-----~--------------~~~-~f----~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyalt 385 (438)
T COG2270 330 IAALYLIFL-----E--------------GEL-DF----WILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALT 385 (438)
T ss_pred HHHHHHHHc-----c--------------ccH-HH----HHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhh
Confidence 222211111 0 011 12 223345555555655443 3469999999999999876
Q ss_pred HHhhccCcchhhhh
Q psy10696 158 GCGLAFIPGPIIYG 171 (174)
Q Consensus 158 ~rllg~IP~Pi~fG 171 (174)
.|. +.+.||..++
T Consensus 386 gra-~S~~gp~lv~ 398 (438)
T COG2270 386 GRA-ASFLGPFLVA 398 (438)
T ss_pred hhH-HHHHHHHHHH
Confidence 654 4677777665
No 163
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=71.42 E-value=2.6 Score=37.04 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSS 61 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s 61 (174)
+..++++|+++|++.+..++....++.|..++.......++......+|.+++..+..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999998888777777778888888887777766554
No 164
>PRK10091 MFS transport protein AraJ; Provisional
Probab=70.85 E-value=1.8 Score=36.46 Aligned_cols=61 Identities=21% Similarity=0.399 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLG 64 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g 64 (174)
+..+.+.|+++|++.+...+.....++|..++.+.....|.......+|..++..+.++..
T Consensus 91 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 91 YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 3456788999999988877766666766655544444566666677777777666655543
No 165
>TIGR00898 2A0119 cation transport protein.
Probab=70.61 E-value=4.4 Score=35.30 Aligned_cols=59 Identities=17% Similarity=0.336 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSY 62 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~ 62 (174)
+..++++|+++|++.++.++...+++.|..++.+.....+.....+.+|.+++.++..+
T Consensus 180 ~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 238 (505)
T TIGR00898 180 YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYF 238 (505)
T ss_pred HHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44678899999999999999898888888776665556666667777777666655443
No 166
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=70.60 E-value=0.72 Score=39.47 Aligned_cols=60 Identities=17% Similarity=0.358 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
+..++++|+++|++.++.++....|+.|+.++.+.............+|..++.......
T Consensus 102 ~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 102 FWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 567889999999999999999999999987766555556666666666766666655444
No 167
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=70.47 E-value=1.8 Score=38.96 Aligned_cols=62 Identities=13% Similarity=0.063 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
++..+.+.|++.|+++++.+ -...||....++.+...-.|...++..+|.+++.+++....+
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s 175 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT 175 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46678999999999999999 777888888888877788899999999999999988887443
No 168
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=68.66 E-value=1.7 Score=36.71 Aligned_cols=64 Identities=13% Similarity=0.026 Sum_probs=46.8
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCccee
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKW 72 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prw 72 (174)
.+....+++..+.+.+.+....|++ ++++.+. +.|.+.+.+.++..++.++.+++.+|-.|-|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~ 70 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLH---DVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKH 70 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 4445566666666666666556654 3567775 99999999999999999999999887444443
No 169
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=68.38 E-value=3.3 Score=31.35 Aligned_cols=58 Identities=17% Similarity=0.323 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhc
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSY 62 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~ 62 (174)
-.+..+..+.|++.+.+|+---.|++++-+|.+..+..|+.-+.+..+..+|.++.-.
T Consensus 90 ~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 90 YTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999999999999888888888899888888887777655443
No 170
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=68.30 E-value=4.4 Score=35.61 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
.+.+|+.+-|+.|.|.+-+-+-+-+|++++-|+.+-+.......++|.+|..++.++++++
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 4678899999999999999999999999999987666699999999999999999999987
No 171
>KOG2615|consensus
Probab=68.09 E-value=1.2 Score=39.10 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
|.-|.++|++.|+ .++-.++.-+++.|..+++.-+.-.+.+..++.+|-.+|-.+++|+..
T Consensus 121 F~afv~aR~l~Gi-~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 FAAFVLARFLGGI-FKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHhhhh-ccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 3567888999999 777888888999999999777778888888999888888888888754
No 172
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=66.54 E-value=2.1 Score=36.57 Aligned_cols=50 Identities=20% Similarity=0.547 Sum_probs=37.8
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeeeehhhhhhhhccccccc
Q psy10696 40 VVLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVALGSIIMSIGCFLRTYT 90 (174)
Q Consensus 40 ~~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig~g~l~~~~g~~l~~l~ 90 (174)
.+.+.+.+...+|..+|.++.+++.+| ++|+- +-++.++..+|+++..+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~-~~~~~~~~~i~~~~~~~~ 96 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPA-LIISALLMIIGSILIAFA 96 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccc-cccccccccccccccccc
Confidence 488999999999999999999999876 55533 344666666666665543
No 173
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=65.67 E-value=3.5 Score=35.69 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHH-HHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSS-AWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~-~~~ig~~~~~~~~s~~ 63 (174)
+++.+++|.+||+..+.++..++.|+|++.++...++-.|++.+ .+.+|.+++..+.++.
T Consensus 301 ~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 301 VALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34556778899999999999999999999988777776666654 4678888888777765
No 174
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=65.31 E-value=3 Score=37.02 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=49.6
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcce-eeeehhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTK-WVALGSIIMSI 82 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~pr-wig~g~l~~~~ 82 (174)
...+..++....+..+..+....|+. +.++.+. +.+.+.+.+.........+.+++.+|-..+| .+-+|.++.++
T Consensus 24 ~~~~~~~~~~~~~~y~~~~~l~~yl~---~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 24 YLIFSIELWERFGYYGLQGIMAVYLV---KQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 34455555555555555555566663 3566764 6777777766555555556777777632333 44577777777
Q ss_pred hcccccc
Q psy10696 83 GCFLRTY 89 (174)
Q Consensus 83 g~~l~~l 89 (174)
|.++..+
T Consensus 101 g~~l~~~ 107 (500)
T PRK09584 101 GYALVAW 107 (500)
T ss_pred HHHHHHH
Confidence 7766554
No 175
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=64.93 E-value=3.9 Score=34.68 Aligned_cols=61 Identities=20% Similarity=0.275 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+.++|+++|++.+...+.....+.+..+ .+...-.|...+....|..++..+..+..+
T Consensus 97 ~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~ 157 (393)
T PRK09705 97 SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ 157 (393)
T ss_pred hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999887776666555433 233346666666666666666666655443
No 176
>KOG0255|consensus
Probab=64.74 E-value=6.8 Score=34.49 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+++.|+++|++.++..+.+..++.|+..+.+...-... ....-.++.++...++|+-.
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999988776655555 55556666666667777654
No 177
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=64.38 E-value=1.5 Score=37.18 Aligned_cols=107 Identities=9% Similarity=0.064 Sum_probs=53.7
Q ss_pred cCCCchh-HHHHHHHHHh-hhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccc
Q psy10696 34 RKNKMPV-VLGVMSSAWD-VGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGS 111 (174)
Q Consensus 34 ~~~~~s~-~~g~i~~~~~-ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~ 111 (174)
+..+.+. +.|.+..... ++..++..+.+.+.+|-+|.|++-++.+...+.++...+..... + +
T Consensus 238 ~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~--------------~ 302 (402)
T PRK11902 238 RGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-K--------------H 302 (402)
T ss_pred HhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-C--------------c
Confidence 3456664 8888876543 45777777777776665555555444444444433221110000 0 1
Q ss_pred hhHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHH
Q psy10696 112 HFMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEA 156 (174)
Q Consensus 112 ~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~ 156 (174)
.+.......+.++..|++..+.+++..+.++++..+-..+++..
T Consensus 303 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (402)
T PRK11902 303 -LWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSA 346 (402)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 12222222334456666666666666555554444444454433
No 178
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=63.45 E-value=5.3 Score=30.21 Aligned_cols=90 Identities=19% Similarity=0.114 Sum_probs=58.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHH
Q psy10696 41 VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFIL 120 (174)
Q Consensus 41 ~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf 120 (174)
..+++...+.++..+...++..+|.| |- +.+|++.+..+-..-. ++-...+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K-----~s------m~lg~~~y~~y~~~~~------------------~~~~~~l 92 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPK-----WS------MILGSLGYAIYIASFF------------------YPNSYTL 92 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhH-----HH------HHHHHHHHHHHHHHHH------------------hhhHHHH
Confidence 67778888888888888888777654 42 2222322221100000 0001234
Q ss_pred HHHHHHhhcCccCceeEEe----eecCCCCchhHHHHHHHHHH
Q psy10696 121 CLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGITEALGC 159 (174)
Q Consensus 121 ~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi~~~~~r 159 (174)
..+..+.|++.+++|+--- ++-+++++....|+.|.+.+
T Consensus 93 ~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~ 135 (156)
T PF05978_consen 93 YPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQ 135 (156)
T ss_pred HHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHH
Confidence 5688999999999998653 36778889999999998776
No 179
>PF13347 MFS_2: MFS/sugar transport protein
Probab=62.59 E-value=16 Score=31.32 Aligned_cols=136 Identities=10% Similarity=0.078 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
++..++...+++..+.+...+...=|.++..+. +...+.+.....++..++..+...+..|-.|-|....+.++.++
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~---~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 226 PFRILLLAFFLQWLAFALMNTFLPYYFTYVLGN---EGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHH
Confidence 456677777777776665554443344333222 24567777788888888888888887776666666677777777
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe----eecC-------CCCchhHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVS-------PEDKSLSI 151 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~-------~~~sslyl 151 (174)
+.+...+-+- .+.+.+ .+...+.|++....+.+.. +.+| +++.+.+.
T Consensus 303 ~~~~~~~~~~------------------~~~~~~----~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~ 360 (428)
T PF13347_consen 303 GFLLLFFLGP------------------GSPWLV----LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF 360 (428)
T ss_pred HHHHHHHHHh------------------hhHHHH----HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence 6665433210 111222 2334455555555444333 2333 35578888
Q ss_pred HHHHHHHHhhcc
Q psy10696 152 GITEALGCGLAF 163 (174)
Q Consensus 152 Gi~~~~~rllg~ 163 (174)
|++....++-..
T Consensus 361 s~~~~~~k~~~~ 372 (428)
T PF13347_consen 361 SVNSFFIKIGQG 372 (428)
T ss_pred HhhhhhhHHHHH
Confidence 888776665433
No 180
>PRK15011 sugar efflux transporter B; Provisional
Probab=62.01 E-value=2.1 Score=36.27 Aligned_cols=31 Identities=10% Similarity=0.168 Sum_probs=22.1
Q ss_pred cCCCCchhHHHHHHHHHHhhccCcchhhhhcc
Q psy10696 142 VSPEDKSLSIGITEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 142 V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~ 173 (174)
..|+++..+.|+.....+ +|...+|.+.|.+
T Consensus 333 ~~p~~~g~~~~~~~~~~~-lg~~~g~~l~G~i 363 (393)
T PRK15011 333 LMPGQAGSATTLYTNTSR-VGWIIAGSLAGIV 363 (393)
T ss_pred hCCCCcchHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 345678899998877654 5777777777754
No 181
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=61.88 E-value=3.9 Score=34.31 Aligned_cols=59 Identities=15% Similarity=0.281 Sum_probs=42.8
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
..++++|+++|++.+..++...+++.|..++.+.....|.......++..++..+....
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677899999998887877777777766655555667777777777777666665554
No 182
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=61.54 E-value=4.4 Score=34.19 Aligned_cols=59 Identities=17% Similarity=0.178 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
..+.+.|+++|++.+...+...++++|..++.+.....+.......++..++..+.++.
T Consensus 102 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677899999988877777777777766654444455666655555656555555544
No 183
>PRK11663 regulatory protein UhpC; Provisional
Probab=60.28 E-value=3.3 Score=35.60 Aligned_cols=61 Identities=11% Similarity=0.027 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
..+++.|+++|++.+..++...+.+.+..++.+...-.|+......+|..++..+.+++..
T Consensus 112 ~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 112 WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556678888887776666666666666665555667788888888888888777776543
No 184
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=60.00 E-value=3.1 Score=37.03 Aligned_cols=147 Identities=18% Similarity=0.223 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-CCcc-eeeeehhh--
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-GHKT-KWVALGSI-- 78 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~p-rwig~g~l-- 78 (174)
...|+++.++-.-|.++..+++..|-. +..+++. +...+...-++...++..+..++..| +.|+ |++-....
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~---~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYAT---EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 456889999988899998888887764 4778886 98888899999999999999988776 4454 34322111
Q ss_pred -hhhhhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEE----eeecCCCCchhHHHH
Q psy10696 79 -IMSIGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQ----FRCVSPEDKSLSIGI 153 (174)
Q Consensus 79 -~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lg----l~~V~~~~sslylGi 153 (174)
++.+..++-..++ . ...+.+ +.| .+..++.|+...|.+... -+-+|+++.+-+.|+
T Consensus 360 ~~i~~~g~~G~~~~----~--------~g~~~~---~~f----~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgl 420 (477)
T PF11700_consen 360 IIIPLYGLFGFWPS----F--------FGLKSP---WEF----WVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGL 420 (477)
T ss_pred HHHHHHHHHHhhhc----c--------cCcccH---HHH----HHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHH
Confidence 2222222111111 0 000111 112 233456666666666544 345899999999999
Q ss_pred HHHHHHhhccCcchhhhhcc
Q psy10696 154 TEALGCGLAFIPGPIIYGAL 173 (174)
Q Consensus 154 ~~~~~rllg~IP~Pi~fG~~ 173 (174)
..+.-|.- .+.||.++|.+
T Consensus 421 y~i~gk~s-s~lGPll~g~i 439 (477)
T PF11700_consen 421 YAITGKAS-SWLGPLLFGLI 439 (477)
T ss_pred HHHHHHHH-HHHHHHHHHHH
Confidence 99877766 66689999875
No 185
>PRK09528 lacY galactoside permease; Reviewed
Probab=59.66 E-value=3.3 Score=35.23 Aligned_cols=62 Identities=16% Similarity=0.017 Sum_probs=44.4
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcce
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTK 71 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~pr 71 (174)
+.+..++..++.+.+.++...|+. ++++.+. +.|.+.+.+.++..+..++.+.+.+|-+|-|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~---~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~ 77 (420)
T PRK09528 15 FSLFFFFFFFIWSSWFSFFPIWLH---DINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKK 77 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH
Confidence 344555555554445666666653 3567775 9999999999999999999999988744333
No 186
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=56.99 E-value=5.1 Score=33.14 Aligned_cols=60 Identities=12% Similarity=0.163 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccC
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLG 64 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g 64 (174)
..+.+.++++|++.+...+...+++.|..++.+.....++......+|..++..+..++.
T Consensus 80 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999988877777777777766655566777777777777777776666543
No 187
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=56.64 E-value=3.4 Score=34.78 Aligned_cols=60 Identities=3% Similarity=-0.012 Sum_probs=43.2
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHH-HHHhhhhhhhhhhhhccCCC
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMS-SAWDVGTLASFLVSSYLGGK 66 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~-~~~~ig~~~~~~~~s~~g~~ 66 (174)
.++..|++||+..+.+.+....++++. ++.+..+..|..+ ....+|..++..+.++.-++
T Consensus 295 ~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~ 355 (382)
T TIGR00902 295 LIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT 355 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456689999999999999999999876 4433344556554 35567777777777776554
No 188
>KOG0255|consensus
Probab=56.32 E-value=9.4 Score=33.61 Aligned_cols=96 Identities=18% Similarity=0.305 Sum_probs=63.4
Q ss_pred ccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCcc
Q psy10696 33 VRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCG 110 (174)
Q Consensus 33 ~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~ 110 (174)
++.+..+. ......+.+-+|.++|.++.+++.++ +.||-. =++.++..++.+..++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~-~~~~~~~~i~~~~~a~a-------------------- 168 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVL-LVSLLLFIIFGILTAFA-------------------- 168 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHH-HHHHHHHHHHHHHHHHh--------------------
Confidence 34555555 88888899999999999999999887 444432 23334433333332221
Q ss_pred chhHHHHHHHHHHHHHhhcCccCceeEEe----eecCCCCchhHHHH
Q psy10696 111 SHFMWFIFILCLLNFFSATGRAGNTIIQF----RCVSPEDKSLSIGI 153 (174)
Q Consensus 111 ~~~~~f~~lf~~~q~l~g~g~tP~~~lgl----~~V~~~~sslylGi 153 (174)
++.. .+++..++.|++.++.++.+. ..++|++|+.++.+
T Consensus 169 ~~~~----~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 169 PNYW----MFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred CcHH----HHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH
Confidence 2222 234567788888877776654 57999999999888
No 189
>PRK11043 putative transporter; Provisional
Probab=55.74 E-value=6.9 Score=32.89 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSY 62 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~ 62 (174)
+..++++|+++|++.+.......+.+.|..++.+.....+.+.....++..++....++
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 152 (401)
T PRK11043 94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAW 152 (401)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567889999998776655555555555554444344555555555555554444443
No 190
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=54.32 E-value=8.7 Score=34.05 Aligned_cols=59 Identities=10% Similarity=0.253 Sum_probs=42.3
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCC--chhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNK--MPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~--~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+.+++.+||+|.+.+.+...+.+.|..++.+ .....++.....++|++++..+.+++.+
T Consensus 108 l~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 108 IFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred HHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999998877777777654432 2235667778888888877776666543
No 191
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=54.10 E-value=7.4 Score=31.73 Aligned_cols=79 Identities=23% Similarity=0.255 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceee--eehhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWV--ALGSIIM 80 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwi--g~g~l~~ 80 (174)
|..++.+..+|-. .++-|..+ .|=+++.+|.+++. |+-.+..+.|+|..++.+.+-.++. .|-|. .+|....
T Consensus 2 W~~l~a~~~v~~~-~Gt~Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~---~gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 2 WLSLVASIWVQLC-SGTTYTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDR---FGPWVVLLIGAVLG 76 (250)
T ss_pred hhhHHHHHHHHHh-cCcccchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHh---cchHHHHHHHHHHH
Confidence 5666777777755 44444444 45578889999995 9999999999999987666555543 23343 3555555
Q ss_pred hhhcccc
Q psy10696 81 SIGCFLR 87 (174)
Q Consensus 81 ~~g~~l~ 87 (174)
.+|....
T Consensus 77 ~~GY~~~ 83 (250)
T PF06813_consen 77 FVGYGLL 83 (250)
T ss_pred HHHHHHH
Confidence 5555443
No 192
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=54.05 E-value=6.7 Score=34.48 Aligned_cols=126 Identities=6% Similarity=-0.055 Sum_probs=81.9
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCccee-eeehhhhhhhhcccccccccccCCCCccccCCCCCCccch
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKW-VALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSH 112 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prw-ig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~ 112 (174)
..+.+. +.|.+.....++.+++..+...+.. +.+.|+ +.++.++.+++.+...+-. +-.+ ...+ ...
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~-~~~~r~~l~~~~~l~~~~~~~~~~l~-~~~~---~~~g-----i~~- 350 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLK-TFPYRLLFGVTTLLYTLSSLFDLILV-KRWN---LAFG-----ISD- 350 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHhCceeee-eccc---cccC-----CCC-
Confidence 356665 9999999988888888888887754 344554 4677777777765543210 0000 0000 000
Q ss_pred hHHHHHHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhhhc
Q psy10696 113 FMWFIFILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIYGA 172 (174)
Q Consensus 113 ~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~ 172 (174)
.+......++-++..+++..|...+..+.+|+++++...|+...+. -+|...++.+-|.
T Consensus 351 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~-~lg~~v~~~~gg~ 409 (468)
T TIGR00788 351 EVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASIL-HLGSSVSGFLGVL 409 (468)
T ss_pred eeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHH-HHHHHHHHHHHHH
Confidence 0111222346688888889999888889999999999999998864 6677777765443
No 193
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=52.80 E-value=4.7 Score=33.80 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
+..+++.|+++|++.+...+.......|..++.+.....+.......++..++..+.+.+.+
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 157 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT 157 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34577889999998776655555555554444444445555666666666666666655543
No 194
>PRK09848 glucuronide transporter; Provisional
Probab=52.53 E-value=7.9 Score=33.32 Aligned_cols=113 Identities=11% Similarity=0.005 Sum_probs=62.8
Q ss_pred eeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCC----Ccce-eeeehhhhhhhhccc-ccccccccCCC
Q psy10696 25 GVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKG----HKTK-WVALGSIIMSIGCFL-RTYTNCSCIPN 97 (174)
Q Consensus 25 ~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~----~~pr-wig~g~l~~~~g~~l-~~l~~c~c~~~ 97 (174)
...|++| ..+++. +.|.+.+..-+..++..++.+++-+|. .|.| |+-++.++.++.++. +..+. -..
T Consensus 31 l~~y~~~---~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~--~~~- 104 (448)
T PRK09848 31 LLSYYTD---VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPT--DWS- 104 (448)
T ss_pred HHHHHHH---HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcC--CCC-
Confidence 3346643 346675 999999999999999999999986652 2233 766666655544443 22221 000
Q ss_pred CccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee-ecCCCCchhHHHHH
Q psy10696 98 GMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR-CVSPEDKSLSIGIT 154 (174)
Q Consensus 98 ~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~-~V~~~~sslylGi~ 154 (174)
. ..+...+....++..+..++-..|...+.-. .-++++|..+-+..
T Consensus 105 ---------~--~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r 151 (448)
T PRK09848 105 ---------H--SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAAR 151 (448)
T ss_pred ---------c--chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHH
Confidence 0 0111112222334455556666777776443 23445666664443
No 195
>KOG0254|consensus
Probab=50.90 E-value=21 Score=31.61 Aligned_cols=49 Identities=22% Similarity=0.415 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccc
Q psy10696 41 VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTY 89 (174)
Q Consensus 41 ~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l 89 (174)
+.+++.+.+.+|.+++.++.+.+.++-.|-+.+-++.++..+|+++.+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~ 138 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL 138 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999999999988755555566667777777776554
No 196
>KOG0252|consensus
Probab=47.39 E-value=5.8 Score=35.68 Aligned_cols=108 Identities=22% Similarity=0.275 Sum_probs=75.1
Q ss_pred ccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCc
Q psy10696 31 DNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADC 109 (174)
Q Consensus 31 ~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C 109 (174)
..|+.-+.++ -.+.++....+|.++|.++.+++|++--|-|-.|.-++++-+.++...++.+.-.+. |
T Consensus 74 ~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~-----------~ 142 (538)
T KOG0252|consen 74 GDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPL-----------G 142 (538)
T ss_pred CCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCc-----------c
Confidence 3455556777 899999999999999999999999987777888988888888887666664332210 1
Q ss_pred cchhHHHHHHHHHHHHHhhcCccCceeEEee----ecCCCCchhHHHHHH
Q psy10696 110 GSHFMWFIFILCLLNFFSATGRAGNTIIQFR----CVSPEDKSLSIGITE 155 (174)
Q Consensus 110 ~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~----~V~~~~sslylGi~~ 155 (174)
.+..++.--++.|+|...=|++.-. +-.++.|+.-++...
T Consensus 143 ------~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavF 186 (538)
T KOG0252|consen 143 ------VMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVF 186 (538)
T ss_pred ------hhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEE
Confidence 1112234577888888877776643 344555666555443
No 197
>KOG2533|consensus
Probab=47.21 E-value=15 Score=32.97 Aligned_cols=137 Identities=20% Similarity=0.183 Sum_probs=78.4
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSI 82 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~ 82 (174)
+.++|..-+++-.=-+. ++.+++....+.-++.. +.+.+.+.+.++.+++-.+.++++.|-.-.|++....+.-++
T Consensus 47 ~~~~~~~y~~~~~d~~s---i~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 47 LPFLCYLYFHAYLDKSS---IVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHhcchhc---chhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 34455555555554333 23344443334444555 999999999999999999999999986644444322222222
Q ss_pred hcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee----ecCCCCchhHHHHHHHHH
Q psy10696 83 GCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR----CVSPEDKSLSIGITEALG 158 (174)
Q Consensus 83 g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~----~V~~~~sslylGi~~~~~ 158 (174)
-.++. +.+ ++.+.| ++.+++.|+-++..++.-.. +=++++++.-+|+.++ .
T Consensus 124 ~~~~~----~~~----------------~s~~~~----ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a-~ 178 (495)
T KOG2533|consen 124 FGFLT----AAV----------------HSFPGL----IALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYA-S 178 (495)
T ss_pred HHHHH----HHH----------------hhhHHH----HHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHH-h
Confidence 21111 111 111222 34567777777666653332 4677888999998886 3
Q ss_pred HhhccCcchh
Q psy10696 159 CGLAFIPGPI 168 (174)
Q Consensus 159 rllg~IP~Pi 168 (174)
.-+|.|+|++
T Consensus 179 ~~~g~i~ggl 188 (495)
T KOG2533|consen 179 ASLGNIFGGL 188 (495)
T ss_pred cchhhHHHHH
Confidence 3334554443
No 198
>PF12832 MFS_1_like: MFS_1 like family
Probab=46.74 E-value=9.7 Score=25.09 Aligned_cols=46 Identities=15% Similarity=0.184 Sum_probs=36.0
Q ss_pred eecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceee
Q psy10696 28 YLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWV 73 (174)
Q Consensus 28 ~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwi 73 (174)
|+.-.-|+.+++. ++|++.+...+...++..+.+.+.+|.+|.|.+
T Consensus 22 fl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 22 FLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred hhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 3434445677886 999999999999999999999998876666544
No 199
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=45.11 E-value=16 Score=30.68 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=37.0
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCC-CCcce
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGK-GHKTK 71 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~pr 71 (174)
.+.+.|+++|++.+...+...+..+|.+|+.+. ..|.......+|.+++..+.++..++ ++|.-
T Consensus 96 ~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~~~~--a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~ 160 (382)
T PRK11128 96 LLFVAIGLFNLFFSPLVPLTDALANTWQKQIGL--DYGKVRLWGSIAFVIGSALTGKLVSWFGEQAI 160 (382)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHhhccC--CcchHHHHHHHHHHHHHHHHHHHHHHcChhHH
Confidence 455788989998888888766666666543322 22333333345555555555554432 45544
No 200
>PTZ00207 hypothetical protein; Provisional
Probab=43.77 E-value=12 Score=34.45 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhh
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLA 55 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~ 55 (174)
++..+++.++++|+|.+.+.+....++.++.++. .....|+..+...+|.++
T Consensus 119 s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~-RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSN-RGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhh-hHHHHHHHHHHHHHHHHH
Confidence 4667889999999999888777777776666532 345888999998998875
No 201
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=43.46 E-value=16 Score=30.60 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=38.0
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHH--HHHhhhhhhhhhhh-hccCCC-CCcceee
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMS--SAWDVGTLASFLVS-SYLGGK-GHKTKWV 73 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~--~~~~ig~~~~~~~~-s~~g~~-~~~prwi 73 (174)
.+...-+.||+-.+-.. +++....|+.+.+. ++|.+. +..-+...+...+. .+..+| +||++|+
T Consensus 5 ~~~~ly~~~g~~~~~~~----p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i 73 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAM----DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWV 73 (390)
T ss_pred HHHHHHHHHHhHHHHHH----HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHH
Confidence 34445588888544444 44444456667785 999974 34455554455455 555443 6788884
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=42.66 E-value=28 Score=29.77 Aligned_cols=55 Identities=16% Similarity=0.361 Sum_probs=43.0
Q ss_pred CCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-----CCcceeeeehhhhhhhhcccccc
Q psy10696 35 KNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-----GHKTKWVALGSIIMSIGCFLRTY 89 (174)
Q Consensus 35 ~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-----~~~prwig~g~l~~~~g~~l~~l 89 (174)
..+++. ..|.+.....+-.++.-++.+++-+| ++|-.|+-+|.++.+++.++.-.
T Consensus 31 ~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~ 91 (428)
T PF13347_consen 31 VLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFS 91 (428)
T ss_pred HcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhc
Confidence 336675 99999999999999999999998653 34445999999999887776654
No 203
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=41.65 E-value=9.2 Score=33.62 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
+-.+....++.++|+....+...+.+++..++...+.+.|.......+|+.++..+....
T Consensus 381 ~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~ 440 (475)
T TIGR00924 381 PWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFG 440 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678889999999999999988888877766666799999999999999988877764
No 204
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=41.19 E-value=11 Score=32.49 Aligned_cols=70 Identities=17% Similarity=0.323 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHH-HHHhhhhhhhhhhhhc----cCCC---CCcceeee
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMS-SAWDVGTLASFLVSSY----LGGK---GHKTKWVA 74 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~-~~~~ig~~~~~~~~s~----~g~~---~~~prwig 74 (174)
..+.+.++++|++.+...+....++.|..++....+..|..+ ..+.+|..++..+.++ .+++ +++.-|..
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 345667899999887777776777777777666666777775 4556666666555554 3432 34555654
No 205
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=40.83 E-value=9.9 Score=34.27 Aligned_cols=62 Identities=24% Similarity=0.314 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh----HHHHHHHHHhhhhhhhhhhhhccCC
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV----VLGVMSSAWDVGTLASFLVSSYLGG 65 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~----~~g~i~~~~~ig~~~~~~~~s~~g~ 65 (174)
...+++..++.|++.+-+.+.-.+++.++++|.+++. .....+.+.-+||+++.++++.+|.
T Consensus 103 ~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~ 168 (524)
T PF05977_consen 103 PWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGA 168 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 3456778899999888888888888889999988884 3444556777888888888888765
No 206
>KOG4686|consensus
Probab=40.67 E-value=14 Score=31.79 Aligned_cols=64 Identities=14% Similarity=0.266 Sum_probs=43.6
Q ss_pred hcccccccceeeeeecccccCCCchh-HHHHHH-HHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhh
Q psy10696 15 GIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMS-SAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 15 g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~-~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~ 81 (174)
-+..-|+++++.... +|||++|+ +.+-+. ..|.|+.....++....+..+.+-.|+.-+.+..-
T Consensus 277 yva~fPFi~lg~~fF---~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl 342 (459)
T KOG4686|consen 277 YVAWFPFITLGPMFF---QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTL 342 (459)
T ss_pred HHHHHHHhhhhHHHH---HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHH
Confidence 344778899888654 68999997 666666 45666666666665555555778888875554443
No 207
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=37.18 E-value=14 Score=32.23 Aligned_cols=129 Identities=13% Similarity=0.132 Sum_probs=82.9
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhcc
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGCF 85 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~~ 85 (174)
++.+-++.+.=--+..+-.-+-+|++..++++|. ..|++.+..-+.-.+...+..-++.|-.--|-+..+.++.++|+.
T Consensus 13 li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~ 92 (395)
T COG2807 13 LLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL 92 (395)
T ss_pred HHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3344444444444555566688999999999996 999999887777666666666554443344566788999999988
Q ss_pred cccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEeeecC---CCCchhHHHHHHHHHHh
Q psy10696 86 LRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFRCVS---PEDKSLSIGITEALGCG 160 (174)
Q Consensus 86 l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V~---~~~sslylGi~~~~~rl 160 (174)
+..+.+ ...++.+..+.|+|.+-.+.+--.-+| ||+-+.-+|++.+.+.+
T Consensus 93 iR~~~~-------------------------~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~ 145 (395)
T COG2807 93 IRSLGG-------------------------LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGA 145 (395)
T ss_pred HHhccc-------------------------HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHH
Confidence 876541 112345666667666655555444444 45566666666655543
No 208
>KOG2563|consensus
Probab=36.99 E-value=52 Score=29.52 Aligned_cols=131 Identities=15% Similarity=0.209 Sum_probs=80.5
Q ss_pred cceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-CCcceeeeehhhhhhhhcccccccccccCCCCc
Q psy10696 22 WSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-GHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGM 99 (174)
Q Consensus 22 ~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~ 99 (174)
.=...+.|.|..++|.-++ ..-+.+..|.+-.....+...|+.+| +-|+ =..+|..+.++|+.+.....-.-+
T Consensus 60 qWI~ya~i~n~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~-a~llgt~ln~iGa~Ir~iss~p~v---- 134 (480)
T KOG2563|consen 60 QWIQYAPINNYVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRT-ALLLGTVLNGIGAWIRLISSLPFV---- 134 (480)
T ss_pred hheeehhHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchHH-HHHHHHHHHHHHHHHhhhccCccc----
Confidence 3345566667777666665 78888888988888888888888765 3333 223667777777777543211111
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEe--e----ecCCCCchhHHHHHHHH---HHhhccCcchhhh
Q psy10696 100 ATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQF--R----CVSPEDKSLSIGITEAL---GCGLAFIPGPIIY 170 (174)
Q Consensus 100 ~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl--~----~V~~~~sslylGi~~~~---~rllg~IP~Pi~f 170 (174)
++.++ + .+...||.+.+..+.= .+++ + +-++++|+.+-.+..+- .-.+|++..|++.
T Consensus 135 ----------~~~f~-~-~l~~~Gq~iaa~Aq~F--im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 135 ----------PPLFR-R-PLTHTGQSIAAAAQPF--ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred ----------cccch-h-hhhHHhHHHHHHhhhH--hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceec
Confidence 11122 2 4567788888876643 3444 2 46777777775555432 3556777777765
Q ss_pred h
Q psy10696 171 G 171 (174)
Q Consensus 171 G 171 (174)
.
T Consensus 201 ~ 201 (480)
T KOG2563|consen 201 P 201 (480)
T ss_pred C
Confidence 4
No 209
>KOG2504|consensus
Probab=36.54 E-value=18 Score=32.45 Aligned_cols=78 Identities=14% Similarity=0.168 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcce-ee-eehhhh
Q psy10696 3 SVIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTK-WV-ALGSII 79 (174)
Q Consensus 3 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~pr-wi-g~g~l~ 79 (174)
.+..++++..++-++..-... ++.+..+..+.+. +.+.+.+...+...++-+..++..++...++ |+ .++.+.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~----~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~ 374 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFV----YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLI 374 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHH----HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHH
Confidence 466777888887776554444 3445556666775 9999999999999999999999988766444 55 366666
Q ss_pred hhhhc
Q psy10696 80 MSIGC 84 (174)
Q Consensus 80 ~~~g~ 84 (174)
.++..
T Consensus 375 ~gl~~ 379 (509)
T KOG2504|consen 375 AGLAR 379 (509)
T ss_pred HHHHH
Confidence 66655
No 210
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=35.93 E-value=1.3e+02 Score=23.04 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=22.5
Q ss_pred CceeEEeeecCC--CCchhHHHHHHHHHHhhc
Q psy10696 133 GNTIIQFRCVSP--EDKSLSIGITEALGCGLA 162 (174)
Q Consensus 133 P~~~lgl~~V~~--~~sslylGi~~~~~rllg 162 (174)
..+.+...|+.+ +....+.|+.....+++=
T Consensus 117 s~~vli~~yv~~~~~~~~~~~Gva~vlqN~lI 148 (166)
T PF05255_consen 117 SVWVLILKYVVPQYTKPTLWPGVANVLQNALI 148 (166)
T ss_pred HHHHhhcccccCCCCCCCcccccHHHHHHHHH
Confidence 346666778777 678999999988877663
No 211
>KOG3762|consensus
Probab=35.33 E-value=7.8 Score=35.50 Aligned_cols=77 Identities=12% Similarity=0.232 Sum_probs=54.5
Q ss_pred HHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHH-----hhhhhhhhhhhhccCCCCCcceeeeehhhhhhhhc
Q psy10696 10 SSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAW-----DVGTLASFLVSSYLGGKGHKTKWVALGSIIMSIGC 84 (174)
Q Consensus 10 ~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~-----~ig~~~~~~~~s~~g~~~~~prwig~g~l~~~~g~ 84 (174)
-+++||+..+.+|.-.++|+++..+|.-..+-.|++...+ .+|++++..++.+++++ --=||.|++.++.-+..
T Consensus 465 ieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~-ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 465 IEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGAR-TTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhH-HHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999887777666666544 35666666666666653 23346676666655544
Q ss_pred ccc
Q psy10696 85 FLR 87 (174)
Q Consensus 85 ~l~ 87 (174)
+..
T Consensus 544 ~~i 546 (618)
T KOG3762|consen 544 ISI 546 (618)
T ss_pred HHh
Confidence 443
No 212
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=31.62 E-value=20 Score=27.14 Aligned_cols=60 Identities=20% Similarity=0.322 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccC-CCchhHHHHHHH-HHhhhhhhhhhhhhcc
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRK-NKMPVVLGVMSS-AWDVGTLASFLVSSYL 63 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~s~~~g~i~~-~~~ig~~~~~~~~s~~ 63 (174)
+..+.+.++.+|++.+...+...+++.|..++ .+.....+.... ...++..++..+..+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLL 155 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788889999998888888888888776 222334444444 3555555555444433
No 213
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=30.89 E-value=29 Score=30.46 Aligned_cols=111 Identities=21% Similarity=0.246 Sum_probs=66.6
Q ss_pred CCCch-hHHHHHHHHHhhhhhhhhhhhhccCCCCCcc-eeeeehhhhhhhhcccccccccccCCCCccccCCCCCCccch
Q psy10696 35 KNKMP-VVLGVMSSAWDVGTLASFLVSSYLGGKGHKT-KWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADCGSH 112 (174)
Q Consensus 35 ~~~~s-~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~p-rwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~ 112 (174)
=|++| +|+--+++....|.+++....++...|+.+| |+..+|.+...++..+..+..- .+ +
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~--~~--------------~- 300 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP--LG--------------S- 300 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh--cc--------------c-
Confidence 46788 4999999999999999999999987765444 4655666666555443222100 00 0
Q ss_pred hHHHHHHHHHHHHHhhcCc----cCceeEEeeecCCCCchhHHHHH---HHHHHhhccCcc
Q psy10696 113 FMWFIFILCLLNFFSATGR----AGNTIIQFRCVSPEDKSLSIGIT---EALGCGLAFIPG 166 (174)
Q Consensus 113 ~~~f~~lf~~~q~l~g~g~----tP~~~lgl~~V~~~~sslylGi~---~~~~rllg~IP~ 166 (174)
.+.|. .+.++.|+|. ....++.++-.++++.+.++|.= +.+.+-+|...|
T Consensus 301 ~~~~~----~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~G 357 (403)
T PF03209_consen 301 PWLFR----PGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLG 357 (403)
T ss_pred chHHH----HHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 12222 2333444443 44444556678888999999853 344455544433
No 214
>KOG2504|consensus
Probab=30.82 E-value=18 Score=32.54 Aligned_cols=131 Identities=14% Similarity=0.091 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhcc-CCCCCcceeeeehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYL-GGKGHKTKWVALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~-g~~~~~prwig~g~l~~~ 81 (174)
|++...+.+.++..-+-.++.++ .-.++.+.|+.+. +.+++.+..---..+...+.+-+ +..+.|+-- -+|.++.+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv-~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~-i~G~~v~~ 122 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGL-LFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM-IAGGLVAA 122 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehh-hHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH-HHHHHHHH
Confidence 34444444444444444555553 3346667777664 77777776665555545555443 333444322 35677777
Q ss_pred hhcccccccccccCCCCccccCCCCCCccchhHHHHHHHHHHHHHhhcCccCceeEEee---ecCCCCchhHHHHHHHHH
Q psy10696 82 IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFIFILCLLNFFSATGRAGNTIIQFR---CVSPEDKSLSIGITEALG 158 (174)
Q Consensus 82 ~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~---~V~~~~sslylGi~~~~~ 158 (174)
+|.++.++. ++ .+ .+ .+..-++.|+|.+-.+.-.+. .--+|+|+++.|+...-.
T Consensus 123 ~g~~lssF~-------------------~~-i~-~l--~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~Gs 179 (509)
T KOG2504|consen 123 LGLLLSSFA-------------------TS-LW-QL--YLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGT 179 (509)
T ss_pred HHHHHHHHH-------------------hh-HH-HH--HHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccC
Confidence 776655442 22 22 11 123456778877666654443 344688999999988733
Q ss_pred H
Q psy10696 159 C 159 (174)
Q Consensus 159 r 159 (174)
.
T Consensus 180 G 180 (509)
T KOG2504|consen 180 G 180 (509)
T ss_pred C
Confidence 3
No 215
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=29.72 E-value=38 Score=29.63 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=34.5
Q ss_pred HHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhh
Q psy10696 5 IILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVS 60 (174)
Q Consensus 5 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~ 60 (174)
..+.++|+++|++.+++.+ ...++.+..++.+...-.|+..+...+|..++..+.
T Consensus 125 ~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~ 179 (476)
T PLN00028 125 TGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM 179 (476)
T ss_pred HHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999998876543 334455655555555677777766666666554433
No 216
>KOG0252|consensus
Probab=27.98 E-value=10 Score=34.15 Aligned_cols=56 Identities=20% Similarity=0.303 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLV 59 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~ 59 (174)
.+-++..|++.|+|.++=|+++-+..+|..++.......+.+.+.-+.|.+.+.++
T Consensus 144 m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~iv 199 (538)
T KOG0252|consen 144 MMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIV 199 (538)
T ss_pred hhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHH
Confidence 35678899999999999999997766655444444446666666666655554443
No 217
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=26.60 E-value=29 Score=30.79 Aligned_cols=59 Identities=20% Similarity=0.202 Sum_probs=44.3
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccC
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLG 64 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g 64 (174)
.+....+++|+|+....+.+.+++.++.++...+...|......-+|+.++..+.++++
T Consensus 384 ~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~ 442 (500)
T PRK09584 384 WLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMA 442 (500)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 57788999999999999999998888777655555666666555677777766666554
No 218
>PRK09669 putative symporter YagG; Provisional
Probab=25.33 E-value=54 Score=28.12 Aligned_cols=124 Identities=13% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-----CCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCc
Q psy10696 36 NKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-----GHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADC 109 (174)
Q Consensus 36 ~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-----~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C 109 (174)
++++. +.|.+.+..-+-.++.-++.+++-+| ++|=+|+-+|.++.++..++..+....-..
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~------------- 106 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGAT------------- 106 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcc-------------
Q ss_pred cchhHHHHHHHHHHHHHhhcCccCceeEEee-ecCCCCchhHHHHHHHHHHhhccCcchhhhhccC
Q psy10696 110 GSHFMWFIFILCLLNFFSATGRAGNTIIQFR-CVSPEDKSLSIGITEALGCGLAFIPGPIIYGALL 174 (174)
Q Consensus 110 ~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~-~V~~~~sslylGi~~~~~rllg~IP~Pi~fG~~i 174 (174)
.+...+....++-.....+-..|...+.-+ .-++++|....+.... ...+|...++++...++
T Consensus 107 -~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~-~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 107 -GKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFA-LSFIGGLIVSVIALPLV 170 (444)
T ss_pred -hHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
No 219
>KOG3098|consensus
Probab=25.20 E-value=80 Score=28.24 Aligned_cols=58 Identities=17% Similarity=0.297 Sum_probs=48.3
Q ss_pred HHHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhcc
Q psy10696 6 ILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYL 63 (174)
Q Consensus 6 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~ 63 (174)
++.+++.+.|+|.+-+|+=--.|++++-+|++..+.+++.-+....+-.+|.++.-.+
T Consensus 104 ~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 104 YLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred HHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 4567889999999999998889999999999999888888888887777776555544
No 220
>PRK10429 melibiose:sodium symporter; Provisional
Probab=23.60 E-value=1.1e+02 Score=26.60 Aligned_cols=119 Identities=8% Similarity=0.093 Sum_probs=0.0
Q ss_pred CCchh-HHHHHHHHHhhhhhhhhhhhhccCCC-----CCcceeeeehhhhhhhhcccccccccccCCCCccccCCCCCCc
Q psy10696 36 NKMPV-VLGVMSSAWDVGTLASFLVSSYLGGK-----GHKTKWVALGSIIMSIGCFLRTYTNCSCIPNGMATQGACPADC 109 (174)
Q Consensus 36 ~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~-----~~~prwig~g~l~~~~g~~l~~l~~c~c~~~~~~~~~~C~~~C 109 (174)
.+++. ..|.+....-+--++.-.++++..+| ++|=.|+-+|.++.+++.++.-.+...-..
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~------------- 103 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGT------------- 103 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCcc-------------
Q ss_pred cchhHHHHHHHHHHHHHhhcCccCceeEEeeec-CCCCchhHHHHHHHHHHhhccCcchh
Q psy10696 110 GSHFMWFIFILCLLNFFSATGRAGNTIIQFRCV-SPEDKSLSIGITEALGCGLAFIPGPI 168 (174)
Q Consensus 110 ~~~~~~f~~lf~~~q~l~g~g~tP~~~lgl~~V-~~~~sslylGi~~~~~rllg~IP~Pi 168 (174)
.+...+....++..+...+-.+|...+.-+-. +++||....+.......+.+.+-+.+
T Consensus 104 -~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 104 -AQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
No 221
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=22.08 E-value=51 Score=30.46 Aligned_cols=109 Identities=24% Similarity=0.248 Sum_probs=60.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeee-ehhhhhh--hhcccccccccccCCCCccccCCCCCCccchhHHHH
Q psy10696 41 VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVA-LGSIIMS--IGCFLRTYTNCSCIPNGMATQGACPADCGSHFMWFI 117 (174)
Q Consensus 41 ~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig-~g~l~~~--~g~~l~~l~~c~c~~~~~~~~~~C~~~C~~~~~~f~ 117 (174)
+.+.+...+.+|..++.++...+..+-+|-||.- +|.+++. +|++... + .+..+ ..+
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~-------~----------~~n~~--~~i- 409 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV-------R----------PDNKN--AAI- 409 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc-------c----------CCCcc--hHH-
Confidence 4566666666666666655555544444556652 3333332 2332111 0 01111 112
Q ss_pred HHHHHHHHHhhcCccCceeEEeeecCCCCchhHHHHHHHHHHhhccCcchhhh
Q psy10696 118 FILCLLNFFSATGRAGNTIIQFRCVSPEDKSLSIGITEALGCGLAFIPGPIIY 170 (174)
Q Consensus 118 ~lf~~~q~l~g~g~tP~~~lgl~~V~~~~sslylGi~~~~~rllg~IP~Pi~f 170 (174)
...+++++..|....|.++..--.+|+++-+.+.|+..+ .|.+|+-.|--+|
T Consensus 410 ~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s-~R~~GGsIg~aIy 461 (599)
T PF06609_consen 410 AFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGS-IRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHH-HHHHhhHHHHHHH
Confidence 234466777777777777666557898888888888766 6766655454444
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=20.64 E-value=91 Score=27.95 Aligned_cols=82 Identities=13% Similarity=0.146 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcce-eeeehhhhhh
Q psy10696 4 VIILLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTK-WVALGSIIMS 81 (174)
Q Consensus 4 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~pr-wig~g~l~~~ 81 (174)
++.+.+..+..-+.+-|+.++....=+|.++|.++.+ ....-....-+...+...+++.++++ ++.+ |.+.+.+...
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~-~~~~g~~~~~~~~~v 194 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG-DKALGYQGTALVLGV 194 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-cchhhHHHHHHHHHH
Confidence 3444555566666677888888776678888888887 55444455566666666777777764 4333 5544444444
Q ss_pred hhccc
Q psy10696 82 IGCFL 86 (174)
Q Consensus 82 ~g~~l 86 (174)
+|.+.
T Consensus 195 i~~i~ 199 (467)
T COG2211 195 IGVIL 199 (467)
T ss_pred HHHHH
Confidence 44443
No 223
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=20.06 E-value=43 Score=29.78 Aligned_cols=66 Identities=6% Similarity=0.104 Sum_probs=53.1
Q ss_pred HHHHHHHhhcccccccceeeeeecccccCCCchhHHHHHHHHHhhhhhhhhhhhhccCCCCCccee
Q psy10696 7 LLISSTVLGIGSSTYWSLGVAYLDDNVRKNKMPVVLGVMSSAWDVGTLASFLVSSYLGGKGHKTKW 72 (174)
Q Consensus 7 ~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~s~~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prw 72 (174)
|.+..++.|+..++..++.=+.+.++-++-+.....|+.....-.+..++.++.+..-...|+-|+
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~ 448 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRY 448 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 566778899999999999999999999988777799999888877777777777776555555554
No 224
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=20.05 E-value=21 Score=31.11 Aligned_cols=62 Identities=13% Similarity=0.249 Sum_probs=47.4
Q ss_pred HHhhcccccccceeeeeecccccCCCchh-HHHHHHHHHhhhhhhhhhhhhccCCCCCcceeee
Q psy10696 12 TVLGIGSSTYWSLGVAYLDDNVRKNKMPV-VLGVMSSAWDVGTLASFLVSSYLGGKGHKTKWVA 74 (174)
Q Consensus 12 ~~~g~~~~~~~~~~~~~i~~~~~~~~~s~-~~g~i~~~~~ig~~~~~~~~s~~g~~~~~prwig 74 (174)
+++|. ++..+...+.-+.++..+.+.|. +.|.+.+...+..+...+.+-...+|..|-||+-
T Consensus 215 LfmGl-qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~ 277 (395)
T COG2807 215 LFMGL-QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLV 277 (395)
T ss_pred HHHHh-hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Confidence 45566 33444455667778888889997 9999999999999999999998888766666653
Done!