BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10697
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAL1|KISHA_PONAB Protein kish-A OS=Pongo abelii GN=TMEM167A PE=3 SV=1
Length = 72
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 62/71 (87%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLLTVI+LLICTC Y+RSL PSLLDRNKTG++G FWK ARIGERKSPYV+V
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LF+
Sbjct: 61 CIVMAFSILFI 71
>sp|Q8TBQ9|KISHA_HUMAN Protein kish-A OS=Homo sapiens GN=TMEM167A PE=1 SV=1
Length = 72
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 62/71 (87%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLLTVI+LLICTC Y+RSL PSLLDRNKTG++G FWK ARIGERKSPYV+V
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LF+
Sbjct: 61 CIVMAFSILFI 71
>sp|Q148I3|KISHA_BOVIN Protein kish-A OS=Bos taurus GN=TMEM167A PE=3 SV=1
Length = 72
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 62/71 (87%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLLTVI+LLICTC Y+RSL PSLLDRNKTG++G FWK ARIGERKSPYV+V
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDRNKTGLLGIFWKCARIGERKSPYVAVC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LF+
Sbjct: 61 CIVMAFSILFI 71
>sp|B5G2S6|KISHA_TAEGU Protein kish-A OS=Taeniopygia guttata GN=TMEM167A PE=3 SV=1
Length = 72
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 62/71 (87%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLLTVI+LLICTC Y+RSL PSLLD+NK+G++G FWK ARIGERKSPYV+V
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDKNKSGLLGIFWKCARIGERKSPYVAVC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LFM
Sbjct: 61 CVVMAFSILFM 71
>sp|Q9CR64|KISHA_MOUSE Protein kish-A OS=Mus musculus GN=Tmem167a PE=2 SV=1
Length = 72
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 62/71 (87%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLLTVI+LLICTC Y+RSL PS+LDRNKTG++G FWK ARIGERKSPYV++
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSILDRNKTGLLGIFWKCARIGERKSPYVAIC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LF+
Sbjct: 61 CIVMAFSILFI 71
>sp|Q5ZII6|KISHA_CHICK Protein kish-A OS=Gallus gallus GN=TMEM167A PE=3 SV=1
Length = 72
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 62/71 (87%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLLTVI+LLICTC Y+RSL PSLLD+NKTG++G FWK ARIGERKSPYV+V
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLAPSLLDKNKTGLLGIFWKCARIGERKSPYVAVC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LF+
Sbjct: 61 CVVMAFSILFV 71
>sp|Q5BJC2|KISHA_DANRE Protein kish-A OS=Danio rerio GN=tmem167a PE=2 SV=1
Length = 72
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 59/70 (84%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLLTVI+LLICTC Y+RSL PSLLD+NKTG +G FWK ARIGERKSPYV+
Sbjct: 1 MSAIFNFQSLLTVILLLICTCAYIRSLTPSLLDKNKTGFLGIFWKCARIGERKSPYVAFC 60
Query: 254 CLGLAMASLF 263
C+ +A+ LF
Sbjct: 61 CIVMALTILF 70
>sp|A2VDC5|KISHA_XENLA Protein kish-A OS=Xenopus laevis GN=tmem167a PE=3 SV=1
Length = 72
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 61/71 (85%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLL VI+LLICTC YLRSL P+LLD+NKTGV+G FWK ARIGERKSPYV+V
Sbjct: 1 MSAIFNFQSLLIVILLLICTCAYLRSLVPNLLDKNKTGVLGIFWKCARIGERKSPYVAVC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LFM
Sbjct: 61 CVVMAFSILFM 71
>sp|Q28FL7|KISHA_XENTR Protein kish-A OS=Xenopus tropicalis GN=tmem167a PE=3 SV=2
Length = 72
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNFQSLL VI+LLICTC YLR+L P+LLD+NKTG++G FWK ARIGERKSPYV+V
Sbjct: 1 MSAIFNFQSLLIVILLLICTCAYLRALVPNLLDKNKTGILGIFWKCARIGERKSPYVAVC 60
Query: 254 CLGLAMASLFM 264
C+ +A + LFM
Sbjct: 61 CVVMAFSILFM 71
>sp|Q9VWH8|KISH_DROME Protein kish OS=Drosophila melanogaster GN=ksh PE=3 SV=2
Length = 72
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 58/70 (82%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M ALFNF SLL+VI+LLICTC YLRSLFPSL+DRNKTG MGTFWK ARIGERKSP+V
Sbjct: 1 MSALFNFHSLLSVILLLICTCAYLRSLFPSLIDRNKTGFMGTFWKLARIGERKSPWVGAA 60
Query: 254 CLGLAMASLF 263
CL +A LF
Sbjct: 61 CLIMAFTVLF 70
>sp|G2TRS3|KISH_SCHPO Protein kish OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ksh1 PE=2 SV=1
Length = 73
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTGVMGTFWKFARIGERKSPYVSVF 253
M A+FNF+SLL VI+L ICTCTYL FP+LL++ K GV FWK ARIGER SPY+S+F
Sbjct: 1 MTAIFNFESLLFVILLTICTCTYLHRQFPALLEKRKEGVTMVFWKCARIGERASPYISLF 60
Query: 254 CLGLAMASLF 263
C+ +A+ +F
Sbjct: 61 CVFMALRFIF 70
>sp|Q8TGJ3|KISH_YEAST Protein kish OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=KSH1 PE=3 SV=1
Length = 72
Score = 85.9 bits (211), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLDRNKTG-VMGTFWKFARIGERKSPYVSV 252
M ALFNF+SLL VI+LLIC+C+Y+ +PSLLDR K V+G FWK AR+GER SPYVS+
Sbjct: 1 MSALFNFRSLLQVILLLICSCSYVHGQWPSLLDRYKNHEVLGAFWKMARVGERASPYVSL 60
Query: 253 FCLGLAMASL 262
C+ +A++
Sbjct: 61 ACILMAISQF 70
>sp|Q54HH9|KISH_DICDI Protein kish OS=Dictyostelium discoideum GN=tmem167 PE=3 SV=1
Length = 72
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSLFPSLLD-RNKTGVMGTFWKFARIGERKSPYVSV 252
M+A+FNFQSLL VI+L ICTCTY+R +PSLL+ R+K G K A IGER SP+VS
Sbjct: 1 MVAIFNFQSLLVVILLFICTCTYIRGSYPSLLEVRDKHSFSGLPRKAAIIGERLSPWVSA 60
Query: 253 FCLGLAMASLF 263
CL + + +L+
Sbjct: 61 CCLIMGLWTLY 71
>sp|Q28GL2|KISHB_XENTR Protein kish-B OS=Xenopus tropicalis GN=tmem167b PE=3 SV=1
Length = 74
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSL--FPSLLDRNKTGVMGTFWKFARIGERKSPYVS 251
M +++ LL +L +CTC Y R + S L K GV G F+K A IG R VS
Sbjct: 1 MTNVYSLDGLLVFALLFVCTCAYFRKVPRLRSWLLSEKKGVWGVFYKAAVIGSRLHLAVS 60
Query: 252 VFCLGLAMASLFM 264
+ C+ +A LF+
Sbjct: 61 ISCIAMAFYVLFI 73
>sp|Q6DE23|KISHB_XENLA Protein kish-B OS=Xenopus laevis GN=tmem167b PE=3 SV=1
Length = 74
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSL--FPSLLDRNKTGVMGTFWKFARIGERKSPYVS 251
M +++ LL +L +CTC Y R + S L K GV G F+K A IG R VS
Sbjct: 1 MTNVYSLDGLLVFALLFVCTCAYFRKVPRLRSWLLSEKKGVWGVFYKAAVIGSRLHLAVS 60
Query: 252 VFCLGLAMASLFM 264
+ C+ +A LF+
Sbjct: 61 ISCIAMAFYVLFI 73
>sp|Q6AZW1|KISHB_DANRE Protein kish-B OS=Danio rerio GN=tmem167b PE=3 SV=1
Length = 74
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSL--FPSLLDRNKTGVMGTFWKFARIGERKSPYVS 251
M +++F +L +L ICTC YL+ + S L K GV G F+K A IG R V+
Sbjct: 1 MTNVYSFDGILVFGLLFICTCAYLKKVPRLNSWLLSEKKGVWGVFYKAAVIGTRLHVVVA 60
Query: 252 VFCLGLAMASLFM 264
CL +A +F+
Sbjct: 61 ASCLCMAFYLIFL 73
>sp|Q80X45|KISHB_MOUSE Protein kish-B OS=Mus musculus GN=Tmem167b PE=3 SV=1
Length = 74
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSL--FPSLLDRNKTGVMGTFWKFARIGERKSPYVS 251
M +++ +L +L +CTC Y + + + L K GV G F+K A IG R V+
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 252 VFCLGLAMASLFM 264
+ C+ +A LF+
Sbjct: 61 IACIVMAFYVLFI 73
>sp|Q0IIL4|KISHB_BOVIN Protein kish-B OS=Bos taurus GN=TMEM167B PE=3 SV=1
Length = 74
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSL--FPSLLDRNKTGVMGTFWKFARIGERKSPYVS 251
M +++ +L +L +CTC Y + + + L K GV G F+K A IG R V+
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 252 VFCLGLAMASLFM 264
+ C+ +A LF+
Sbjct: 61 IACIVMAFYVLFI 73
>sp|Q5RAU6|KISHB_PONAB Protein kish-B OS=Pongo abelii GN=TMEM167B PE=3 SV=1
Length = 74
Score = 42.0 bits (97), Expect = 0.005, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSL--FPSLLDRNKTGVMGTFWKFARIGERKSPYVS 251
M +++ +L +L +CTC Y + + + L K GV G F+K A IG R V+
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 252 VFCLGLAMASLFM 264
+ C+ +A LF+
Sbjct: 61 IACVVMAFYVLFI 73
>sp|Q9NRX6|KISHB_HUMAN Protein kish-B OS=Homo sapiens GN=TMEM167B PE=2 SV=1
Length = 74
Score = 42.0 bits (97), Expect = 0.005, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 194 MLALFNFQSLLTVIILLICTCTYLRSL--FPSLLDRNKTGVMGTFWKFARIGERKSPYVS 251
M +++ +L +L +CTC Y + + + L K GV G F+K A IG R V+
Sbjct: 1 MTNVYSLDGILVFGLLFVCTCAYFKKVPRLKTWLLSEKKGVWGVFYKAAVIGTRLHAAVA 60
Query: 252 VFCLGLAMASLFM 264
+ C+ +A LF+
Sbjct: 61 IACVVMAFYVLFI 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,928,904
Number of Sequences: 539616
Number of extensions: 3860721
Number of successful extensions: 7778
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7754
Number of HSP's gapped (non-prelim): 20
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)