Query psy10697
Match_columns 264
No_of_seqs 116 out of 161
Neff 1.8
Searched_HMMs 13730
Date Fri Aug 16 16:17:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10697.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10697hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hpta_ g.68.1.1 (A:) Secretor 17.3 32 0.0023 21.7 2.0 42 89-130 1-56 (56)
2 d2dt5a1 a.4.5.38 (A:4-77) Tran 12.4 12 0.00084 26.0 -1.4 25 159-183 28-52 (74)
3 d1cyoa_ d.120.1.1 (A:) Cytochr 11.1 50 0.0037 22.1 1.6 27 139-165 22-48 (88)
4 d2glia1 g.37.1.1 (A:103-134) F 11.0 20 0.0014 22.1 -0.5 11 129-139 3-13 (32)
5 d1vr3a1 b.82.1.6 (A:1-179) Aci 7.9 67 0.0049 25.0 1.4 21 117-138 120-140 (179)
6 d2i53a2 a.74.1.1 (A:158-267) C 7.6 98 0.0071 20.9 2.0 14 248-261 47-60 (110)
7 d1mj4a_ d.120.1.1 (A:) Sulfite 7.0 1E+02 0.0076 19.8 1.9 26 139-164 21-46 (80)
8 d1ny721 b.121.4.2 (2:1-182) Co 6.6 93 0.0067 24.8 1.7 15 107-121 150-164 (182)
9 d2adca2 d.58.7.1 (A:444-531) P 6.1 73 0.0053 19.9 0.7 10 55-64 2-11 (88)
10 d1u3da1 a.99.1.1 (A:198-497) C 6.1 37 0.0027 26.8 -1.1 11 245-255 52-62 (300)
No 1
>d1hpta_ g.68.1.1 (A:) Secretory trypsin inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.35 E-value=32 Score=21.67 Aligned_cols=42 Identities=24% Similarity=0.427 Sum_probs=24.2
Q ss_pred cCCCCCCccc-ccc--ccccceeEEeeeccC-----------CCCCceeeeeccee
Q psy10697 89 DKKGGRPTCT-PLV--GTSHQKVCISTWTTP-----------KTGDPVVMKHAGKC 130 (264)
Q Consensus 89 ~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 130 (264)
|.-|..|.|. |+. ....+.||-|.=.|= +++-.+-++|.|.|
T Consensus 1 d~~gr~~~C~~~~~~C~~~~~PVCGsdG~TY~N~C~l~~~~C~~~~~i~v~~~G~C 56 (56)
T d1hpta_ 1 DSLGREAKCYNELNGCTYEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC 56 (56)
T ss_dssp CCSSBCCCCTTCSSCCCCCCBCEEETTSCEESBHHHHHHHHHHHTCCCCEEEESCC
T ss_pred CCCCcCCcCCCCCCCCCCCCCcccCCCCcEeccHhHHHHHHhcCCCceEEeecCCC
Confidence 5667778883 443 244566777643221 23555667777766
No 2
>d2dt5a1 a.4.5.38 (A:4-77) Transcriptional repressor Rex, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=12.41 E-value=12 Score=25.98 Aligned_cols=25 Identities=28% Similarity=0.521 Sum_probs=21.7
Q ss_pred hhHHHHHHHHhhhhhccceeeeeee
Q psy10697 159 CADFLELLQLSAQKLRKDILFIGIF 183 (264)
Q Consensus 159 c~d~~~~l~ls~~~~~~~~~~~~~~ 183 (264)
..+.-+.+.+++..+|||.-++|.|
T Consensus 28 S~~La~~~gi~~~qVRKDls~fG~~ 52 (74)
T d2dt5a1 28 SEQLGGLAQVTAFQVRKDLSYFGSY 52 (74)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCcCHHHHHHHHHHhcCC
Confidence 4556688899999999999999998
No 3
>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}
Probab=11.08 E-value=50 Score=22.09 Aligned_cols=27 Identities=33% Similarity=0.570 Sum_probs=21.9
Q ss_pred ceeccceeehhhhhhcCCCChhHHHHH
Q psy10697 139 WYPLNGIIYGLTAFLWNKPDCADFLEL 165 (264)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~c~d~~~~ 165 (264)
|.-++|.+|=+|.|+-+-|+-.+.|..
T Consensus 22 Wvii~g~VYDvT~f~~~HPGG~~~i~~ 48 (88)
T d1cyoa_ 22 WLILHYKVYDLTKFLEEHPGGEEVLRE 48 (88)
T ss_dssp EEEETTEEEECTTTTTTCTTCSHHHHH
T ss_pred EEEECCEEEecchhhcccCCchHHHHH
Confidence 445789999999999999998776543
No 4
>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.01 E-value=20 Score=22.09 Aligned_cols=11 Identities=27% Similarity=1.165 Sum_probs=8.8
Q ss_pred eeeeEeecCcc
Q psy10697 129 KCHWVTCGTSW 139 (264)
Q Consensus 129 ~~~~~~~~~~~ 139 (264)
.|||-.|+..+
T Consensus 3 nChW~~C~~eF 13 (32)
T d2glia1 3 DCRWDGCSQEF 13 (32)
T ss_dssp BCCBTTCCCBC
T ss_pred ccccccccccc
Confidence 59999998654
No 5
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.93 E-value=67 Score=24.96 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=16.7
Q ss_pred CCCCceeeeecceeeeEeecCc
Q psy10697 117 KTGDPVVMKHAGKCHWVTCGTS 138 (264)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~ 138 (264)
+.||-+++ -+|--||.+++.+
T Consensus 120 ~~GDli~i-Pag~~HwFtl~~~ 140 (179)
T d1vr3a1 120 EKGDMITL-PAGIYHRFTLDEK 140 (179)
T ss_dssp ETTEEEEE-CTTCCEEEEECTT
T ss_pred eCCCEEEe-CCCccEeccCCCC
Confidence 46886665 5899999999976
No 6
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.56 E-value=98 Score=20.87 Aligned_cols=14 Identities=21% Similarity=0.076 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHh
Q psy10697 248 PYVSVFCLGLAMAS 261 (264)
Q Consensus 248 PYVSLaCI~MAf~v 261 (264)
.-||++||.+|+..
T Consensus 47 ~~IA~a~I~lA~~~ 60 (110)
T d2i53a2 47 EIIAVAVMYLAGRL 60 (110)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45788888887654
No 7
>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.98 E-value=1e+02 Score=19.84 Aligned_cols=26 Identities=23% Similarity=0.441 Sum_probs=21.1
Q ss_pred ceeccceeehhhhhhcCCCChhHHHH
Q psy10697 139 WYPLNGIIYGLTAFLWNKPDCADFLE 164 (264)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~c~d~~~ 164 (264)
|.-++|.+|=+|.|+-.-||=.+.+.
T Consensus 21 Wiii~g~VYDvT~f~~~HPGG~~~i~ 46 (80)
T d1mj4a_ 21 WVTLGSEVFDVTEFVDLHPGGPSKLM 46 (80)
T ss_dssp EEEETTEEEECTTTGGGSTTCHHHHH
T ss_pred EEEECCEEEeeeeeHhhcCChhHHHH
Confidence 55688999999999999999765543
No 8
>d1ny721 b.121.4.2 (2:1-182) Comovirus coat proteins (VP37 and VP23) {CPMV (Cowpea mosaic virus) [TaxId: 12264]}
Probab=6.60 E-value=93 Score=24.81 Aligned_cols=15 Identities=40% Similarity=0.813 Sum_probs=12.2
Q ss_pred eeEEeeeccCCCCCc
Q psy10697 107 KVCISTWTTPKTGDP 121 (264)
Q Consensus 107 ~~~~~~~~~~~~~~~ 121 (264)
-+|+|-|+++.+.|-
T Consensus 150 V~CvSgWt~tP~tD~ 164 (182)
T d1ny721 150 VICVSGWTLSPTTDV 164 (182)
T ss_dssp EEEEECCSSCCSSCE
T ss_pred EEEecCccCCCCcce
Confidence 479999998777774
No 9
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.15 E-value=73 Score=19.93 Aligned_cols=10 Identities=50% Similarity=1.072 Sum_probs=7.1
Q ss_pred CCCCCCCCCc
Q psy10697 55 NSKNLYPPST 64 (264)
Q Consensus 55 ~~~~~~~~~~ 64 (264)
|-.|++|||.
T Consensus 2 N~~~~~pPs~ 11 (88)
T d2adca2 2 NFQNIFPPSA 11 (88)
T ss_dssp GGTTCCCSCS
T ss_pred CccCCCCCCC
Confidence 4468889873
No 10
>d1u3da1 a.99.1.1 (A:198-497) Cryptochrome C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=6.13 E-value=37 Score=26.84 Aligned_cols=11 Identities=18% Similarity=-0.070 Sum_probs=0.0
Q ss_pred CcchHHHHHHH
Q psy10697 245 RKSPYVSVFCL 255 (264)
Q Consensus 245 RLSPYVSLaCI 255 (264)
|||||.+.+||
T Consensus 52 rLSPyL~~G~I 62 (300)
T d1u3da1 52 FLSPHLHFGEV 62 (300)
T ss_dssp CCHHHHHTTSS
T ss_pred cccHHHcCCCC
Done!