BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10704
(211 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189237669|ref|XP_967427.2| PREDICTED: similar to hypoxia-inducible factor 1 alpha [Tribolium
castaneum]
Length = 795
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 125/202 (61%), Gaps = 41/202 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++DLMGQ+I+E +HPCDH E+K ILS E+ +S FIRLKCTLTSKGR+VN+K+AT
Sbjct: 127 QIDLMGQNIFEYSHPCDHDEIKEILSTKTREETETPKSFFIRLKCTLTSKGRSVNLKSAT 186
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKVIHCTGH+VQ + DD E G RR
Sbjct: 187 YKVIHCTGHIVQTE--------------------------------DDGNEENAKGTLRR 214
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE-TMEDFLGFNPDIF 179
C VAIG+PIPHP+N + PL QTFLTKHSLDMKFT+AD+ M D LG++ +
Sbjct: 215 -------CLVAIGQPIPHPSNIEAPLPRQTFLTKHSLDMKFTHADDKIMMDVLGYDSEDL 267
Query: 180 IAKSVFDFHHAQDSFHIQNAFK 201
+ KSV+D+HHA DS I +AFK
Sbjct: 268 VGKSVYDYHHAMDSDAICSAFK 289
>gi|270008138|gb|EFA04586.1| hypoxia inducible factor 1, alpha subunit [Tribolium castaneum]
Length = 879
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 125/202 (61%), Gaps = 41/202 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++DLMGQ+I+E +HPCDH E+K ILS E+ +S FIRLKCTLTSKGR+VN+K+AT
Sbjct: 211 QIDLMGQNIFEYSHPCDHDEIKEILSTKTREETETPKSFFIRLKCTLTSKGRSVNLKSAT 270
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKVIHCTGH+VQ + DD E G RR
Sbjct: 271 YKVIHCTGHIVQTE--------------------------------DDGNEENAKGTLRR 298
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE-TMEDFLGFNPDIF 179
C VAIG+PIPHP+N + PL QTFLTKHSLDMKFT+AD+ M D LG++ +
Sbjct: 299 -------CLVAIGQPIPHPSNIEAPLPRQTFLTKHSLDMKFTHADDKIMMDVLGYDSEDL 351
Query: 180 IAKSVFDFHHAQDSFHIQNAFK 201
+ KSV+D+HHA DS I +AFK
Sbjct: 352 VGKSVYDYHHAMDSDAICSAFK 373
>gi|328718768|ref|XP_001951675.2| PREDICTED: hypothetical protein LOC100167974 [Acyrthosiphon pisum]
Length = 928
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 133/203 (65%), Gaps = 16/203 (7%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++DL+GQSIYE H CD +E+K IL+ ++DI Q+S F+R+KCTLT+KGRNVN+K+A+
Sbjct: 125 QIDLIGQSIYEFAHLCDQAELKDILT---SKDIGEQKSFFVRMKCTLTNKGRNVNLKSAS 181
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKV+H TGH V N S L + + + + +SD + + D + E+
Sbjct: 182 YKVLHFTGHSVINTCAKIKSSVLSDGESDSDYESDKKTDSDSKSNNSDLKFEK------- 234
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL---SQTFLTKHSLDMKFTYADETMEDFLGFNPDI 178
PSH FV+I EPIPHPAN ++PL S+ F +KHSLDMK+ AD+ + +++G+ PD
Sbjct: 235 ---SPSHIFVSIAEPIPHPANIEIPLYKQSKIFFSKHSLDMKYIIADDVITNYVGYEPDS 291
Query: 179 FIAKSVFDFHHAQDSFHIQNAFK 201
+ KSVFD++HAQD ++ +FK
Sbjct: 292 LVGKSVFDYYHAQDCNSVEKSFK 314
>gi|328788553|ref|XP_392382.4| PREDICTED: hypothetical protein LOC408852 [Apis mellifera]
Length = 1138
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 128/203 (63%), Gaps = 28/203 (13%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-SVFIRLKCTLTSKGRNVNVKAA 60
++D+MGQS+YE +HPCDH E++ LS+ E+ + S F+RLKCTLTSKGR VN+K+A
Sbjct: 127 QMDMMGQSVYEYSHPCDHEELRECLSSKPLENSEKRACSFFLRLKCTLTSKGRKVNLKSA 186
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+YKVIHCTG L + P SN S DN D TR KD+ E + G
Sbjct: 187 SYKVIHCTGRLTYIRDPVSNSS------DN-----DETR-----NKKDEEGNERDTGAS- 229
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
V +G PIPHP+N ++PL + TFL+KHSL MKFTYADE + ++LG+N +
Sbjct: 230 ---------LVLLGCPIPHPSNIEIPLGRHTFLSKHSLSMKFTYADEKLAEYLGWNSEEL 280
Query: 180 IAKSVFDFHHAQDSFHIQNAFKN 202
+ +SVF+F+HA D+ + +FK+
Sbjct: 281 VGQSVFEFYHALDNLALDKSFKS 303
>gi|242022671|ref|XP_002431762.1| Hypoxia-inducible factor 1 alpha, putative [Pediculus humanus
corporis]
gi|212517087|gb|EEB19024.1| Hypoxia-inducible factor 1 alpha, putative [Pediculus humanus
corporis]
Length = 368
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 114/201 (56%), Gaps = 51/201 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+VD+MG SIYE +HPCDH E++ +LS + RS F+RLKCTLTSKGRNVN+K+AT
Sbjct: 167 QVDMMGNSIYEFSHPCDHEEIREVLSIKSPTESIIPRSFFVRLKCTLTSKGRNVNLKSAT 226
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKVIH ASN
Sbjct: 227 YKVIHYV------DDAASNA---------------------------------------- 240
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
P H +AIGEPIPHP+N ++PL QTFL+KHSLDMKFTYAD+ M +FLG+NP+ I
Sbjct: 241 ----PQHFLIAIGEPIPHPSNIEIPLDKQTFLSKHSLDMKFTYADDKMVEFLGYNPEDLI 296
Query: 181 AKSVFDFHHAQDSFHIQNAFK 201
KS+FDF+HA DS + FK
Sbjct: 297 GKSIFDFYHAMDSEAVDRGFK 317
>gi|350421186|ref|XP_003492763.1| PREDICTED: hypothetical protein LOC100746032 [Bombus impatiens]
Length = 1132
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 125/204 (61%), Gaps = 30/204 (14%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE--DIRAQRSVFIRLKCTLTSKGRNVNVKA 59
++D+MGQS+YE +HPCDH E++ LS+ E D RA S F+RLKCTLTSKGR VN+K+
Sbjct: 127 QMDMMGQSVYEYSHPCDHDELRECLSSKPAEQSDKRAC-SFFLRLKCTLTSKGRKVNLKS 185
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A+YKVIHCTG L + P SN S E D A + DD E + G
Sbjct: 186 ASYKVIHCTGRLTYIRNPVSNSS---ETSD-------------AEHESDDDGNERDTGAS 229
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDI 178
V +G PIPHP+N ++PL + TFL+KHSL MKFTY DE + ++LG+N +
Sbjct: 230 ----------LVLLGCPIPHPSNIEIPLGRHTFLSKHSLSMKFTYTDEKLAEYLGWNSEE 279
Query: 179 FIAKSVFDFHHAQDSFHIQNAFKN 202
+ +SVF+F+HA D+ + FK+
Sbjct: 280 LVGQSVFEFYHALDNLALDKCFKS 303
>gi|383863621|ref|XP_003707278.1| PREDICTED: uncharacterized protein LOC100880842 [Megachile
rotundata]
Length = 1095
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 130/203 (64%), Gaps = 28/203 (13%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-SVFIRLKCTLTSKGRNVNVKAA 60
++D+MGQS+YE +HPCDH E++ LS+ +++ + S F+RLKCTLTSKGR VN+K+A
Sbjct: 127 QMDMMGQSVYEYSHPCDHDELRECLSSKPSKNNEKRACSFFLRLKCTLTSKGRKVNLKSA 186
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
YKVIHCTG L + P N +IE D ++S+ E+E E+
Sbjct: 187 AYKVIHCTGRLTYSHDPVLN---------SIE------------VDDEESKSEDESNERD 225
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
V+ V +G PIPHP+N ++PL + TFL+KHSL MKFTYADE + ++LG+N +
Sbjct: 226 VGVS-----LVLVGCPIPHPSNIEIPLGRHTFLSKHSLSMKFTYADEKLAEYLGWNSEEL 280
Query: 180 IAKSVFDFHHAQDSFHIQNAFKN 202
+ +SVF+F+HA D+ + +FK+
Sbjct: 281 MGQSVFEFYHALDNLALDKSFKS 303
>gi|380025288|ref|XP_003696409.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Apis florea]
Length = 580
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 127/203 (62%), Gaps = 27/203 (13%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-SVFIRLKCTLTSKGRNVNVKAA 60
++D+MGQS+YE +HPCDH E++ LS+ E+ + S F+RLKCTLTSKGR VN+K+A
Sbjct: 353 QMDMMGQSVYEYSHPCDHEELRECLSSKPPENSEKRACSFFLRLKCTLTSKGRKVNLKSA 412
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+YKVIHCTG L + P SN S D+ +N+ D D+ + G
Sbjct: 413 SYKVIHCTGRLTYIRDPVSNSSE----NDDAKNKKD-----------DEGNEGDNTGAS- 456
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
V +G PIPHP+N ++PL + TFL+KHSL MKFTYADE + ++LG++ +
Sbjct: 457 ---------LVLLGCPIPHPSNIEIPLGRHTFLSKHSLSMKFTYADEKLAEYLGWSSEEL 507
Query: 180 IAKSVFDFHHAQDSFHIQNAFKN 202
+ +SVF+F+HA D+ + +FK+
Sbjct: 508 VGQSVFEFYHALDNLALDKSFKS 530
>gi|332023564|gb|EGI63800.1| Hypoxia-inducible factor 1 alpha [Acromyrmex echinatior]
Length = 730
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 128/202 (63%), Gaps = 28/202 (13%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-SVFIRLKCTLTSKGRNVNVKAA 60
++D+MGQS+YE +HPCDH E++ LS+ ++ + + F+RLKCTLTSKGR VN+K+A
Sbjct: 504 QMDMMGQSVYEYSHPCDHDELRECLSSKSADNNEKRTCNFFLRLKCTLTSKGRKVNLKSA 563
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+YKVIHCTG L NI + + N+ + +++ + +E+VG+
Sbjct: 564 SYKVIHCTGRLT-----------------NIRDSNSNSME---VDNEERRKEDEDVGQ-- 601
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
+ V +G PIPHP+N ++PL + TFL+KH+L MKFTYADE + ++LG++ +
Sbjct: 602 ----DTGTSLVLVGSPIPHPSNIEIPLGRHTFLSKHNLSMKFTYADEKLAEYLGWSSEEL 657
Query: 180 IAKSVFDFHHAQDSFHIQNAFK 201
+ +SVF+F+HA D+ + FK
Sbjct: 658 MGRSVFEFYHALDNLALDKCFK 679
>gi|345489461|ref|XP_001605010.2| PREDICTED: hypothetical protein LOC100121394 [Nasonia vitripennis]
Length = 989
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 31/203 (15%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-SVFIRLKCTLTSKGRNVNVKAA 60
++DLMGQS+++ +HPCDH E++ S +E + F+RLKCTLTSKGR VN+K+A
Sbjct: 123 QIDLMGQSVFDYSHPCDHDEIRESFSLKASEVNEDHPCNFFLRLKCTLTSKGRKVNLKSA 182
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+YKVIHCTG L + + N S N +SE + E GE+
Sbjct: 183 SYKVIHCTGRLFAH---------------TVNNVSGNAS---------ESEEQAENGER- 217
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
EP V + P+PHP+N ++PL + TFL+KH+L+MKFTYAD+ + +FLG+ +
Sbjct: 218 ----EPGVSLVVVASPVPHPSNIEIPLGKYTFLSKHNLNMKFTYADDKLAEFLGWESNEL 273
Query: 180 IAKSVFDFHHAQDSFHIQNAFKN 202
+ +SVFDFHHA D+ + +FK+
Sbjct: 274 MGQSVFDFHHALDNSSLDKSFKS 296
>gi|449331544|gb|AGE97172.1| hypoxia inducible factor-1alpha [Haliotis diversicolor]
Length = 711
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 126/204 (61%), Gaps = 43/204 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS--ANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKA 59
+++LMGQSI++ THPCDH E++ ++S + ++ + +R++FIR+KCTLTSKG++VN+K+
Sbjct: 125 QIELMGQSIFDFTHPCDHEEIRDMMSDRPHGSKAVSEERTLFIRMKCTLTSKGKSVNLKS 184
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
ATYKVI CTG LV + + +D DD+
Sbjct: 185 ATYKVIKCTGRLVVAK--------------------------KSKKDSDDAS-------- 210
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDI 178
P +A+GEPIPHPAN + PL S TFL+KH+++M FTY D+ ++D +G+N D
Sbjct: 211 ----MYP--YLLAVGEPIPHPANIEAPLDSSTFLSKHNMNMSFTYCDDRIQDLIGYNNDN 264
Query: 179 FIAKSVFDFHHAQDSFHIQNAFKN 202
I KS++++HHA DS ++ AFK+
Sbjct: 265 LIGKSLYNYHHALDSEIVEKAFKD 288
>gi|321473894|gb|EFX84860.1| putative hypoxia inducible factor-1 alpha [Daphnia pulex]
Length = 846
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 123/202 (60%), Gaps = 19/202 (9%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGR-NVNVKAA 60
+VDL+GQSIY+ HPCDH E++ +LS D RS F+RLK TLT+KGR N N+KAA
Sbjct: 126 QVDLIGQSIYDYCHPCDHDELREVLSLR--PDGELARSFFLRLKSTLTAKGRSNNNLKAA 183
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+YKV++C+G +V + S E A + DD E+++ ++
Sbjct: 184 SYKVMNCSGRIVLATASSVRNSFSQE---------------GAFNEDDDLATEDDLEVEK 228
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
V + SH V +G+PIPHP+N ++PL S TFLTKH+LDMK+TY DE + +FLG+ P+
Sbjct: 229 AVKSPTSHFLVMVGDPIPHPSNIEMPLDSYTFLTKHTLDMKYTYVDEKIYEFLGYMPEDL 288
Query: 180 IAKSVFDFHHAQDSFHIQNAFK 201
S + HHAQD+ I ++K
Sbjct: 289 EGHSAYQLHHAQDNESILKSYK 310
>gi|357616292|gb|EHJ70114.1| putative hypoxia-inducible factor 1 alpha [Danaus plexippus]
Length = 794
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 124/202 (61%), Gaps = 43/202 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++++MGQS++E +HPCDH EV+ L ++ +R + +RLKCTLTSKGRNV++K+A+
Sbjct: 99 QMEVMGQSVFEFSHPCDHEEVREALRSSK----DGKRDLLLRLKCTLTSKGRNVHLKSAS 154
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKVIH TGH++ ENQ+D DKD +++G+
Sbjct: 155 YKVIHVTGHMLTE-----------------ENQTDG--------DKD----TKKIGKS-- 183
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
VA+G PIPHP+N + PL+ TFLTKHSLDMKFTY+DE +++ LG++ + +
Sbjct: 184 -------ALVAVGRPIPHPSNIETPLNNMTFLTKHSLDMKFTYSDEGLQNALGYDSNDLV 236
Query: 181 AKSVFDFHHAQDSFHIQNAFKN 202
+++D+HHA DS + FK+
Sbjct: 237 GHTLYDYHHAGDSAVLLQQFKS 258
>gi|102621855|gb|ABF71072.1| hypoxia inducible factor 1 alpha [Xenopus laevis]
Length = 800
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 121/207 (58%), Gaps = 43/207 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ A ++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFELTGHSVFDFTHPCDHEELREMLTFRNGPAKKGKEQITERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH M DN NQ +
Sbjct: 184 IKSATWKVLHCTGH--------------MRVYDNANNQ-------------------KHC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE + + +G++
Sbjct: 211 GYKK----PPMKCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYD 266
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ A N
Sbjct: 267 PDELLGRSVYEYYHALDSDHLTKAHHN 293
>gi|318997430|ref|NP_001187230.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
gi|73426661|gb|AAZ75952.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
Length = 776
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI++ THPCDH EV+ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 127 QFDLTGHSIFDFTHPCDHEEVREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 186
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HCTGH+ VQ + +S G V
Sbjct: 187 KSATWKVLHCTGHVRVQEHSESSGG----------------------------------V 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K +T V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 213 GFKEPSIT----YLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 268
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ N
Sbjct: 269 PDELLNRSVYEYYHALDSDHLSKTHHN 295
>gi|148229705|ref|NP_001080449.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus laevis]
gi|27696866|gb|AAH43769.1| Hif1a-prov protein [Xenopus laevis]
Length = 802
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 120/207 (57%), Gaps = 43/207 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ A ++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFELTGHSVFDFTHPCDHEELREMLTFRNGPAKKGKEQITERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH M DN NQ+
Sbjct: 184 IKSATWKVLHCTGH--------------MRVYDNANNQN-------------------HC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ A N
Sbjct: 267 PDELLGRSVYEYYHALDSDHLTKAHHN 293
>gi|126697512|gb|ABO26713.1| hypoxia-inducible factor 1 alpha [Aspius aspius]
Length = 773
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSVFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ +Q ++ +S S EP
Sbjct: 183 KSATWKVLHCAGHVRLQERSESSEDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ +N
Sbjct: 265 PDDLLNRSVYEYYHALDSDHLTKTHQN 291
>gi|157649153|gb|ABV59209.1| hypoxia-inducible factor 1 alpha [Cyprinus carpio]
Length = 774
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSIFEFSHPCDHEELREMLVHKTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ AS EP
Sbjct: 183 KSATWKVLHCAGHVRVQERSEASGDLGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 265 PDDLLNKSVYEYYHALDSDHLTKTHHN 291
>gi|37779200|gb|AAO72733.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
Length = 489
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 121/207 (58%), Gaps = 43/207 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ A ++ +RS F+R+KCT+TS+GR VN
Sbjct: 109 QFELTGHSVFDFTHPCDHEELREMLTFRNGPAKKGKEQITERSFFLRMKCTVTSRGRTVN 168
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH M DN NQ +
Sbjct: 169 IKSATWKVLHCTGH--------------MRVYDNANNQ-------------------KHC 195
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE + + +G++
Sbjct: 196 GYKK----PPMKCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYD 251
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ A N
Sbjct: 252 PDELLGRSVYEYYHALDSDHLTKAHHN 278
>gi|147900690|ref|NP_001086426.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
gi|116487674|gb|AAI26006.1| HIF-1a protein [Xenopus laevis]
Length = 800
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 120/207 (57%), Gaps = 43/207 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ + G S+++ THPCDH E++ +L+ A ++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFEFTGHSVFDFTHPCDHEELREMLTFRNGPAKKGKEQITERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH M DN NQ +
Sbjct: 184 IKSATWKVLHCTGH--------------MRVYDNANNQ-------------------KHC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE + + +G++
Sbjct: 211 GYKK----PPMKCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYD 266
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ A N
Sbjct: 267 PDELLGRSVYEYYHALDSDHLTKAHHN 293
>gi|407316758|gb|AFU07561.1| hypoxia-inducible factor 1 alpha subunit [Schizothorax prenanti]
Length = 770
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 117/207 (56%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ + S S EP
Sbjct: 183 KSATWKVLHCAGHVRVQERGEGSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ N
Sbjct: 265 PDDLLKRSVYEYYHALDSDHLNKTHHN 291
>gi|321117678|gb|ADW54534.1| hypoxia-inducible factor-1alpha [Carassius auratus]
Length = 725
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 117/207 (56%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 96 QFDLTGHSIFEFSHPCDHEELREMLVYRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 155
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HCTGH+ VQ S S EP
Sbjct: 156 KSATWKVLHCTGHVRVQECDEGSGDSGFKEP----------------------------- 186
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 187 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 237
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 238 PDDLLNKSVYEYYHALDSDHLTKTHHN 264
>gi|148704554|gb|EDL36501.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Mus
musculus]
Length = 904
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 192 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 251
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 252 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 278
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 279 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 334
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 335 PEELLGRSIYEYYHALDSDHL 355
>gi|327259020|ref|XP_003214336.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Anolis
carolinensis]
Length = 835
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ DL G S+++ THPCDH E++ +L+ ++ +RS F+R+KCTLTS+GR VN
Sbjct: 148 QFDLTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVN 207
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ DN NQ+
Sbjct: 208 IKSATWKVLHCTGHI--------------RVYDNCNNQT-------------------VC 234
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G++
Sbjct: 235 GYKK----PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELIGYD 290
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 291 PEELLGRSIYEYYHALDSDHL 311
>gi|74219449|dbj|BAE29500.1| unnamed protein product [Mus musculus]
Length = 836
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|2197095|gb|AAC53455.1| hypoxia-inducible factor 1 alpha [Mus musculus]
gi|2289249|gb|AAC53461.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 836
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|20070686|gb|AAH26139.1| Hypoxia inducible factor 1, alpha subunit [Mus musculus]
Length = 836
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|226061948|ref|NP_034561.2| hypoxia-inducible factor 1-alpha [Mus musculus]
gi|32470615|sp|Q61221.3|HIF1A_MOUSE RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha; AltName: Full=ARNT-interacting protein
gi|148704553|gb|EDL36500.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Mus
musculus]
Length = 836
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|26329679|dbj|BAC28578.1| unnamed protein product [Mus musculus]
Length = 837
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 185 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|26345338|dbj|BAC36320.1| unnamed protein product [Mus musculus]
Length = 736
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 24 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 83
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 84 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 110
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 111 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 166
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 167 PEELLGRSIYEYYHALDSDHL 187
>gi|1389891|gb|AAC52730.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 822
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELAGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|407316744|gb|AFU07554.1| hypoxia-inducible factor 1 alpha subunit [Polypterus senegalus]
Length = 801
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 121/207 (58%), Gaps = 43/207 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ A +++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFELTGHSVFDFTHPCDHEELREVLTHRAGAAKKGKEVNTERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HC GH I+ + E + +
Sbjct: 184 IKSATWKVLHCLGH---------------------------------IRAYESCEEQNDC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ +VT V I EPIPHP+N +VPL S+TFL++HSL+MKF+Y DE + + +G+
Sbjct: 211 GYKKPLVTS----LVVICEPIPHPSNIEVPLDSKTFLSRHSLEMKFSYCDERITELMGYQ 266
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
P+ + +SV++++HA DS H+ N
Sbjct: 267 PEDLLGRSVYEYYHAMDSDHLTKTHHN 293
>gi|4379202|emb|CAA64833.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 112 QFELAGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 171
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 172 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 198
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 199 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 254
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 255 PEELLGRSIYEYYHALDSDHL 275
>gi|2821940|emb|CAA70306.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 822
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|2113881|emb|CAA70305.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 112 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 171
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 172 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 198
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 199 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 254
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 255 PEELLGRSIYEYYHALDSDHL 275
>gi|300087115|gb|ADJ67806.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 774
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 183 KSATWKVLHCAGHVRVQERSEGSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I +PIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 265 PDDLLNKSVYEYYHALDSDHLTKTHHN 291
>gi|407316746|gb|AFU07555.1| hypoxia-inducible factor 1 alpha subunit [Hypophthalmichthys
nobilis]
Length = 774
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 183 KSATWKVLHCAGHVRVQERSEGSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I +PIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 265 PDDLLNKSVYEYYHALDSDHLTKTHHN 291
>gi|321117672|gb|ADW54531.1| hypoxia-inducible factor-1alpha [Cyprinus carpio]
Length = 719
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 117/207 (56%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS GR VN+
Sbjct: 90 QFDLTGHSIFEFSHPCDHEELREMLVHKTGSKKTKEQNTERSFFLRMKCTLTSTGRTVNI 149
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ AS EP
Sbjct: 150 KSATWKVLHCAGHVRVQERSEASGDLGFKEP----------------------------- 180
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 181 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 231
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 232 PDDLLNKSVYEYYHALDSDHLTKTHHN 258
>gi|318217867|ref|NP_001187163.1| HIF 2 alpha [Ictalurus punctatus]
gi|116829910|gb|ABK27926.1| HIF 2 alpha [Ictalurus punctatus]
Length = 816
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 43/209 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L+G SI++ THPCDH E++ LS +D+ +R F+R+KCT+TS+GR VN
Sbjct: 121 QVELIGHSIFDFTHPCDHEEIRENLSMKTGVGKKGKDLSTERDFFMRMKCTVTSRGRTVN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+A++KV+HCTGHL NG + P
Sbjct: 181 LKSASWKVLHCTGHLK-----VYNGCSTRTP----------------------------C 207
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K +T C V + EP+PHP+N D P S+TFL++HS+DMKFTY DE + +G+N
Sbjct: 208 GYKESPLT----CVVMLCEPVPHPSNIDTPFDSKTFLSRHSMDMKFTYCDERVTQLMGYN 263
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
P+ + +SV++F+HA DS + + +N C
Sbjct: 264 PEDLLGRSVYEFYHALDSESVTRSHQNLC 292
>gi|321117674|gb|ADW54532.1| hypoxia-inducible factor-1alpha [Pseudorasbora parva]
Length = 719
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 90 QFDLTGHSVFEFSHPCDHEELREMLVHRAGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 149
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 150 KSATWKVLHCVGHVRVQERSEDSGDSGFKEP----------------------------- 180
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 181 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 231
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ N
Sbjct: 232 PDDLLNRSVYEYYHALDSDHLTKTHHN 258
>gi|37499124|gb|AAQ91619.1| hypoxia inducible factor 1 alpha [Danio rerio]
Length = 777
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 125 QFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC GH ++ + SE E+ G
Sbjct: 185 KSATWKVLHCAGH---------------------------------VRVHEGSEASEDSG 211
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
K VT V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+ P
Sbjct: 212 FKEPPVT----YLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
D + +SV++++HA DS H+ N
Sbjct: 268 DDLLNRSVYEYYHALDSDHLTKTHHN 293
>gi|83583630|gb|ABC24677.1| hypoxia inducible factor 1 alpha [Carassius carassius]
Length = 776
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +R+ F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSIFEFSHPCDHEELREMLVHKTGSKKTKEQNTERNFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ + S S EP
Sbjct: 183 KSATWKVLHCAGHVRVQESSEDSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVVICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ N
Sbjct: 265 PDDLLNRSVYEYYHALDSDHLTKTHNN 291
>gi|74223866|dbj|BAE23829.1| unnamed protein product [Mus musculus]
Length = 441
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 185 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|41053885|ref|NP_956527.1| hypoxia-inducible factor 1-alpha [Danio rerio]
gi|28422764|gb|AAH46875.1| Hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) b [Danio rerio]
gi|182892028|gb|AAI65712.1| Hif1ab protein [Danio rerio]
Length = 533
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 125 QFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC GH ++ + SE E+ G
Sbjct: 185 KSATWKVLHCAGH---------------------------------VRVHEGSEASEDSG 211
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
K VT V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+ P
Sbjct: 212 FKEPPVTY----LVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYEP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
D + +SV++++HA DS H+ N
Sbjct: 268 DDLLNRSVYEYYHALDSDHLTKTHHN 293
>gi|294961104|gb|ADF50043.1| hypoxia-inducible factor 1 alpha [Megalobrama amblycephala]
Length = 774
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 183 KSATWKVLHCAGHVRVQERSEGSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I +PIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ N
Sbjct: 265 PDDLLNRSVYEYYHALDSDHLTKTHHN 291
>gi|321117670|gb|ADW54530.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys nobilis]
Length = 719
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 90 QFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 149
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 150 KSATWKVLHCAGHVRVQERSEGSGDSGFKEP----------------------------- 180
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I +PIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 181 ---------PLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 231
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 232 PDDLLNKSVYEYYHALDSDHLTKTHHN 258
>gi|321117666|gb|ADW54528.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 719
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 90 QFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 149
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 150 KSATWKVLHCAGHVRVQERSEGSGDSGFKEP----------------------------- 180
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I +PIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 181 ---------PLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 231
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 232 PDDLLNKSVYEYYHALDSDHLTKTHHN 258
>gi|307192541|gb|EFN75729.1| Hypoxia-inducible factor 1 alpha [Harpegnathos saltator]
Length = 765
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 28/202 (13%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE-DIRAQRSVFIRLKCTLTSKGRNVNVKAA 60
++D+MGQS+YE +HPCDH E++ LS+ +E + + S F+RLKCTLTSKGR VN+K+A
Sbjct: 539 QMDMMGQSVYEYSHPCDHDELRECLSSKLSEKNGKRVYSFFLRLKCTLTSKGRKVNLKSA 598
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+YKVIHCTG L + SN ME ++N+ A ++ + S
Sbjct: 599 SYKVIHCTGRLTTIRDSNSNS---ME----VDNEEGEKEDEEAEREANTS---------- 641
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
V +G PIPHP+N ++PL + TFL+KH+L MKFTYADE + ++LG++ +
Sbjct: 642 ---------LVLVGNPIPHPSNIEIPLGRHTFLSKHNLSMKFTYADEKLAEYLGWDSEDL 692
Query: 180 IAKSVFDFHHAQDSFHIQNAFK 201
+ +SVF+F+HA D+ + FK
Sbjct: 693 MGRSVFEFYHALDNLALDKCFK 714
>gi|45602851|gb|AAR95697.2| hypoxia-inducible factor-1alpha [Ctenopharyngodon idella]
Length = 774
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 183 KSATWKVLHCAGHVRVQERSEGSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I +PIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICDPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ N
Sbjct: 265 PDDLLNRSVYEYYHALDSDHLTKTHHN 291
>gi|348573541|ref|XP_003472549.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cavia porcellus]
Length = 873
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E+K +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 169 QFELTGHSVFDFTHPCDHEEMKEMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 228
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 229 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 255
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 256 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 311
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 312 PEELLGRSIYEYYHALDSDHL 332
>gi|197313456|dbj|BAG69568.1| hypoxia-inducible factor 1 alpha [Daphnia magna]
Length = 842
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 125/202 (61%), Gaps = 22/202 (10%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGR-NVNVKAA 60
++DL+GQSIY+ HPCDH E++ +LS D+ RS F+RLK T+T+KGR N N+KAA
Sbjct: 126 QMDLIGQSIYDYCHPCDHDELREVLSLRPDGDL--TRSFFLRLKSTITAKGRSNNNLKAA 183
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+YKV++C+G +V A N + + A ++DD E+++ +
Sbjct: 184 SYKVMNCSGRIVLATASARNTYS----------------QERAFDEEDDLLTEDDLELEA 227
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
+ T SH V +G+PIPHP+N ++PL S TFLTKH+LDMK+TY DE + +FLG+ +
Sbjct: 228 KAPT--SHFLVMVGDPIPHPSNIEMPLDSYTFLTKHTLDMKYTYVDEKIYEFLGYTSEDL 285
Query: 180 IAKSVFDFHHAQDSFHIQNAFK 201
+S + HHAQD+ I ++K
Sbjct: 286 EGQSAYQLHHAQDNESILKSYK 307
>gi|45383550|ref|NP_989628.1| hypoxia-inducible factor 1-alpha [Gallus gallus]
gi|32469796|sp|Q9YIB9.2|HIF1A_CHICK RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|7594825|dbj|BAA34234.2| hypoxia-inducible factor-1 alpha [Gallus gallus]
Length = 811
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ DL G S+++ THPCDH E++ +L+ ++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFDLTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQ+
Sbjct: 184 IKSATWKVLHCTGHI--------------RVYDTCNNQT-------------------HC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|325513897|gb|ADZ23997.1| hypoxia-inducible factor 1a [Myxocyprinus asiaticus]
Length = 780
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 115/202 (56%), Gaps = 45/202 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ DL G SI+E +HPCDH E++ +L S + E +RS F+R+KCTLTS+GR VN
Sbjct: 123 QFDLTGHSIFEFSHPCDHEELREMLVHRMGSKKNKEMQNTERSFFLRMKCTLTSRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+AT+KV+HCTGH+ VQ ++ S EP
Sbjct: 183 IKSATWKVLHCTGHVRVQERSEESGDCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE + + +G
Sbjct: 215 ----------PQAYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERITELMGH 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHI 196
PD + KSV++++HA DS H+
Sbjct: 265 EPDDLLNKSVYEYYHALDSDHL 286
>gi|326921175|ref|XP_003206838.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Meleagris
gallopavo]
Length = 837
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ DL G S+++ THPCDH E++ +L+ ++ +RS F+R+KCTLTS+GR VN
Sbjct: 150 QFDLTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVN 209
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQ+
Sbjct: 210 IKSATWKVLHCTGHI--------------RVYDTCNNQT-------------------HC 236
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 237 GYKK----PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE 292
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 293 PEELLGRSIYEYYHALDSDHL 313
>gi|166343755|gb|ABY86628.1| hypoxia-inducible factor 1 alpha [Mustelus canis]
Length = 819
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L+G S+++ THPCDH E++ +LS +D +R+ F+R+KCTLTS+GR VN
Sbjct: 123 QFELIGHSVFDFTHPCDHEEMREMLSHRQGPLKKGKDQNTERNFFLRMKCTLTSRGRTVN 182
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + S+N + + EP
Sbjct: 183 IKSATWKVLHCTGHIRVYK-------------------SNNEQTHCGYK-----EP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 215 ---------PMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQ 265
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +SV++F+HA DS H+
Sbjct: 266 PEELLGRSVYEFYHAMDSDHL 286
>gi|194385580|dbj|BAG65167.1| unnamed protein product [Homo sapiens]
Length = 769
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 67 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 126
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 127 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 153
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 154 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 209
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 210 PEELLGRSIYEYYHALDSDHL 230
>gi|340545531|ref|NP_001230013.1| hypoxia-inducible factor 1-alpha isoform 3 [Homo sapiens]
gi|225354050|gb|ACN88547.1| hypoxia-inducible factor 1 alpha isoform I.3 [Homo sapiens]
Length = 850
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 148 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 207
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 208 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 234
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 235 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 290
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 291 PEELLGRSIYEYYHALDSDHL 311
>gi|403264371|ref|XP_003924459.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Saimiri
boliviensis boliviensis]
Length = 850
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 148 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 207
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 208 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 234
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 235 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 290
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 291 PEELLGRSIYEYYHALDSDHL 311
>gi|297298011|ref|XP_002805105.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
Length = 769
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 67 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 126
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 127 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 153
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 154 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 209
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 210 PEELLGRSIYEYYHALDSDHL 230
>gi|332842389|ref|XP_003339308.1| PREDICTED: hypoxia-inducible factor 1-alpha [Pan troglodytes]
gi|332842391|ref|XP_001169001.2| PREDICTED: hypoxia-inducible factor 1-alpha isoform 11 [Pan
troglodytes]
Length = 850
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 148 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 207
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 208 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 234
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 235 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 290
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 291 PEELLGRSIYEYYHALDSDHL 311
>gi|397523307|ref|XP_003831677.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Pan
paniscus]
Length = 850
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 148 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 207
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 208 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 234
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 235 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 290
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 291 PEELLGRSIYEYYHALDSDHL 311
>gi|355693338|gb|EHH27941.1| hypothetical protein EGK_18259, partial [Macaca mulatta]
Length = 816
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 114 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 173
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 174 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 200
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 201 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 256
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 257 PEELLGRSIYEYYHALDSDHL 277
>gi|426377113|ref|XP_004055320.1| PREDICTED: hypoxia-inducible factor 1-alpha [Gorilla gorilla
gorilla]
Length = 604
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|403264367|ref|XP_003924457.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|3790535|gb|AAC68568.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
Length = 826
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|189065475|dbj|BAG35314.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|355778653|gb|EHH63689.1| hypothetical protein EGM_16704 [Macaca fascicularis]
Length = 827
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 185 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|197098558|ref|NP_001126975.1| hypoxia-inducible factor 1-alpha [Pongo abelii]
gi|55733347|emb|CAH93355.1| hypothetical protein [Pongo abelii]
Length = 827
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 185 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|194384556|dbj|BAG59438.1| unnamed protein product [Homo sapiens]
Length = 669
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 58 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 117
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 118 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 144
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 145 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 200
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 201 PEELLGRSIYEYYHALDSDHL 221
>gi|297298013|ref|XP_002805106.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
gi|297298015|ref|XP_002805107.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
Length = 767
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 65 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 125 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 151
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 152 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 207
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 208 PEELLGRSIYEYYHALDSDHL 228
>gi|254973565|gb|ACT98611.1| hypoxia inducible factor 1 subunit alpha [Cloning vector
pCMV-HIF-1a-FLAG]
Length = 848
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|194388958|dbj|BAG61496.1| unnamed protein product [Homo sapiens]
Length = 767
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 65 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 125 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 151
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 152 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 207
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 208 PEELLGRSIYEYYHALDSDHL 228
>gi|109083868|ref|XP_001099149.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 7 [Macaca
mulatta]
gi|402876371|ref|XP_003901945.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Papio
anubis]
gi|380787331|gb|AFE65541.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|383409707|gb|AFH28067.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|384942934|gb|AFI35072.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
Length = 826
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|4504385|ref|NP_001521.1| hypoxia-inducible factor 1-alpha isoform 1 [Homo sapiens]
gi|397523303|ref|XP_003831675.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Pan
paniscus]
gi|2498017|sp|Q16665.1|HIF1A_HUMAN RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha; AltName: Full=ARNT-interacting
protein; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP1; AltName: Full=Class E basic
helix-loop-helix protein 78; Short=bHLHe78; AltName:
Full=Member of PAS protein 1; AltName: Full=PAS
domain-containing protein 8
gi|6636317|gb|AAF20139.1|AF207601_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636319|gb|AAF20140.1|AF207602_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636338|gb|AAF20149.1|AF208487_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|881346|gb|AAC50152.1| hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|1144013|gb|AAC51210.1| MOP1 [Homo sapiens]
gi|11995455|gb|AAG43026.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
gi|15214788|gb|AAH12527.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|32879895|gb|AAP88778.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|61362865|gb|AAX42294.1| hypoxia-inducible factor 1 alpha subunit [synthetic construct]
gi|119601213|gb|EAW80807.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|119601214|gb|EAW80808.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|168278044|dbj|BAG11000.1| hypoxia-inducible factor 1 alpha [synthetic construct]
gi|264685689|dbj|BAI49183.1| hypoxia-inducible factor 1, alpha subunit, variant K12NR [Homo
sapiens]
gi|1097959|prf||2114407A hypoxia-inducible factor 1
Length = 826
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|395745967|ref|XP_002824869.2| PREDICTED: hypoxia-inducible factor 1-alpha [Pongo abelii]
Length = 668
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|148251122|gb|ABQ53550.1| hypoxia-inducible factor 1 alpha [Eospalax cansus]
Length = 818
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|119601212|gb|EAW80806.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_a [Homo sapiens]
Length = 827
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 185 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|351713876|gb|EHB16795.1| Hypoxia-inducible factor 1 alpha [Heterocephalus glaber]
Length = 832
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E+K +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 128 QFELTGHSVFDFTHPCDHEEMKEMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 187
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 188 IKSATWKVLHCTGHI--------------HVYDTNNNQS-------------------QC 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 215 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 270
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 271 PEELLGRSIYEYYHALDSDHL 291
>gi|114653405|ref|XP_001168972.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 10 [Pan
troglodytes]
gi|410226740|gb|JAA10589.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297974|gb|JAA27587.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344149|gb|JAA40616.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 826
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|13242249|ref|NP_077335.1| hypoxia-inducible factor 1-alpha [Rattus norvegicus]
gi|4580533|gb|AAD24413.1|AF057308_1 hypoxia-inducible factor-1 alpha [Rattus norvegicus]
Length = 823
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH I D S + +
Sbjct: 185 IKSATWKVLHCTGH---------------------------------IHVYDTSSNQPQC 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|354492579|ref|XP_003508425.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cricetulus
griseus]
Length = 818
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 112 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 171
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 172 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 198
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 199 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 254
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 255 PEELLGRSIYEYYHALDSDHL 275
>gi|332237272|ref|XP_003267829.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Nomascus
leucogenys]
Length = 850
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 119/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ + QRS F+R+KCTLTS+GR +N
Sbjct: 148 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGREQNTQRSFFLRMKCTLTSRGRTMN 207
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 208 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 234
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 235 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 290
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 291 PEELLGRSIYEYYHALDSDHL 311
>gi|344254779|gb|EGW10883.1| Hypoxia-inducible factor 1 alpha [Cricetulus griseus]
Length = 820
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 112 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 171
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 172 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 198
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 199 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 254
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 255 PEELLGRSIYEYYHALDSDHL 275
>gi|332237268|ref|XP_003267827.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Nomascus
leucogenys]
Length = 826
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 119/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ + QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGREQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|114653413|ref|XP_001168948.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 9 [Pan
troglodytes]
gi|410226738|gb|JAA10588.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297972|gb|JAA27586.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344151|gb|JAA40617.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 735
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|149051449|gb|EDM03622.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Rattus
norvegicus]
Length = 826
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH I D S + +
Sbjct: 185 IKSATWKVLHCTGH---------------------------------IHVYDTSSNQPQC 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|417404834|gb|JAA49153.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 823
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ T NG NQS +
Sbjct: 184 IKSATWKVLHCTGHIHVYDT---NG-----------NQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|31077211|ref|NP_851397.1| hypoxia-inducible factor 1-alpha isoform 2 [Homo sapiens]
gi|397523305|ref|XP_003831676.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Pan
paniscus]
gi|16326344|dbj|BAB70608.1| hypoxia-inducible factor 1 alpha variant [Homo sapiens]
gi|119601215|gb|EAW80809.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_c [Homo sapiens]
Length = 735
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|296215222|ref|XP_002754036.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Callithrix
jacchus]
Length = 735
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|109083876|ref|XP_001098939.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 5 [Macaca
mulatta]
gi|402876373|ref|XP_003901946.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Papio
anubis]
gi|383409709|gb|AFH28068.1| hypoxia-inducible factor 1-alpha isoform 2 [Macaca mulatta]
Length = 735
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|431904459|gb|ELK09842.1| Hypoxia-inducible factor 1 alpha, partial [Pteropus alecto]
Length = 873
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 113 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 172
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ T NG NQS +
Sbjct: 173 IKSATWKVLHCTGHIHVYDT---NG-----------NQS-------------------QC 199
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 200 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 255
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 256 PEELLGRSIYEYYHALDSDHL 276
>gi|403264369|ref|XP_003924458.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Saimiri
boliviensis boliviensis]
Length = 735
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|32469606|sp|O35800.1|HIF1A_RAT RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|2632131|emb|CAA70701.1| hypoxia-inducible factor 1 [Rattus norvegicus]
Length = 825
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH I D S + +
Sbjct: 184 IKSATWKVLHCTGH---------------------------------IHVYDTSSNQPQC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|325513893|gb|ADZ23995.1| hypoxia-inducible factor 2a [Myxocyprinus asiaticus]
Length = 782
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +D+ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSFKTGMGKKVKDLNTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTG L V N PA EP
Sbjct: 183 LKSASWKVLHCTGQLKVYNGCPAHVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V + EPIPHP+N D PL S+TFL++HS+DMKFTY D+ + + +G+
Sbjct: 215 ----------PLTCVVMMCEPIPHPSNIDTPLDSKTFLSRHSMDMKFTYCDDRVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
NP+ + +S ++F+HA DS + + +N C
Sbjct: 265 NPEDLLGRSAYEFYHALDSDSVTKSHQNLC 294
>gi|348531168|ref|XP_003453082.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 766
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ THPCD E++ +L + +++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFTHPCDQEELREMLVHRTGSKKSKEPNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HCTGH+ +PA G+ G
Sbjct: 185 KSATWKVLHCTGHVRVYDSPAEEGTN---------------------------------G 211
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
+K P V I +PIPHP+N +VPL ++TFL++H++DMKFTY DE + D +G++P
Sbjct: 212 QKE----PPVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITDLMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HA DS H+ N
Sbjct: 268 EDLLDRSVYEYYHALDSDHLTKTHHN 293
>gi|338719808|ref|XP_001493256.3| PREDICTED: hypoxia-inducible factor 1-alpha-like [Equus caballus]
Length = 764
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 65 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ T NG NQS +
Sbjct: 125 IKSATWKVLHCTGHIHVYDT---NG-----------NQS-------------------QC 151
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 152 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 207
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 208 PEELLGRSIYEYYHALDSDHL 228
>gi|149051448|gb|EDM03621.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 521
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH I D S + +
Sbjct: 185 IKSATWKVLHCTGH---------------------------------IHVYDTSSNQPQC 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|118573327|sp|Q309Z6.1|HIF1A_EOSBA RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|78058356|gb|ABB17537.1| hypoxia inducible factor 1 alpha subunit [Eospalax baileyi]
Length = 819
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 125 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPIKKGKEQNTQRSFFLRMKCTLTSRGRTMN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 185 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 268 PEELLGRSIYEYYHALDSDHL 288
>gi|410900798|ref|XP_003963883.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Takifugu rubripes]
Length = 864
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT--------EDIRAQRSVFIRLKCTLTSKGR 53
+VDL G SI++ THPCDH E++ LS T +++ ++R F+R+KCT+T++GR
Sbjct: 122 QVDLTGHSIFDFTHPCDHEEIRENLSLKTTGNAYDKKGKELSSERDFFMRMKCTVTTRGR 181
Query: 54 NVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+A +KV+HCTG L + N P + EP
Sbjct: 182 TVNLKSAGWKVLHCTGQLKMYNSCPPRGLCSFREP------------------------- 216
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
P C V + EPIPHP+N D P+ ++TFL++HS+DMKFTY DE + +
Sbjct: 217 -------------PLTCAVLMCEPIPHPSNIDTPMDTRTFLSRHSMDMKFTYCDERVTEL 263
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G+ P+ + +SV+DF+HA DS + + +N C
Sbjct: 264 MGYTPEDLLGRSVYDFYHALDSDKVTKSHQNLC 296
>gi|440910232|gb|ELR60049.1| Hypoxia-inducible factor 1-alpha, partial [Bos grunniens mutus]
Length = 814
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 115 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 174
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 175 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 201
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 202 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 257
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 258 PEELLGRSIYEYYHALDSDHL 278
>gi|225904228|gb|ACO35259.1| hypoxia-inducible factor-1-alpha [Pseudorasbora parva]
Length = 774
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S++E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSVFEFSHPCDHEELREMLVHRAGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ ++ S S EP
Sbjct: 183 KSATWKVLHCVGHVRVQERSEDSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I EPIPHP+N +VPL S+TFL++H+LDMK +Y DE + + +G+
Sbjct: 214 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKVSYCDERITELMGYE 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ N
Sbjct: 265 PDDLLNRSVYEYYHALDSDHLTKTHHN 291
>gi|332237270|ref|XP_003267828.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Nomascus
leucogenys]
Length = 735
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 119/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ + QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGREQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|359320071|ref|XP_003639249.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Canis lupus
familiaris]
Length = 823
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|51921791|gb|AAU14021.1| hypoxia-inducible factor 1 alpha subunit [Spermophilus
tridecemlineatus]
Length = 821
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|117935055|ref|NP_776764.2| hypoxia-inducible factor 1-alpha [Bos taurus]
gi|47933909|gb|AAT39520.1| hypoxia inducible factor-1a [Bos grunniens]
gi|117306677|gb|AAI26623.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Bos taurus]
gi|296482937|tpg|DAA25052.1| TPA: hypoxia-inducible factor 1-alpha [Bos taurus]
Length = 823
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|432096666|gb|ELK27249.1| Hypoxia-inducible factor 1-alpha [Myotis davidii]
Length = 840
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 65 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ T NG NQS +
Sbjct: 125 IKSATWKVLHCTGHIHVYDT---NG-----------NQS-------------------QC 151
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 152 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 207
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 208 PEELLGRSIYEYYHALDSDHL 228
>gi|32469795|sp|Q9XTA5.1|HIF1A_BOVIN RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|5019612|dbj|BAA78675.1| hypoxia-inducible factor-1 alpha [Bos taurus]
Length = 823
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|111143456|gb|ABH06559.1| hypoxia inducible factor isoform 1b [Bos grunniens]
Length = 823
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|301754491|ref|XP_002913080.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ailuropoda
melanoleuca]
Length = 822
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|121484012|gb|ABM54325.1| HIF1A [Pan paniscus]
Length = 583
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 112 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 171
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 172 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 198
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 199 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 254
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 255 PEELLGRSIYEYYHALDSDHL 275
>gi|124111265|gb|ABM92027.1| HIF1A [Pan troglodytes]
Length = 436
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 48 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 107
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 108 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 134
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 135 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 190
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 191 PEELLGRSIYEYYHALDSDHL 211
>gi|130486012|ref|NP_001076251.1| hypoxia-inducible factor 1-alpha [Oryctolagus cuniculus]
gi|31095610|gb|AAP43517.1| hypoxia inducible factor 1 alpha subunit [Oryctolagus cuniculus]
Length = 819
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|281349362|gb|EFB24946.1| hypothetical protein PANDA_000857 [Ailuropoda melanoleuca]
Length = 812
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 114 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 173
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 174 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 200
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 201 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 256
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 257 PEELLGRSIYEYYHALDSDHL 277
>gi|410962414|ref|XP_003987765.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Felis catus]
Length = 824
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|116248098|sp|Q0PGG7.1|HIF1A_BOSMU RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|111143453|gb|ABH06558.1| hypoxia inducible factor isoform 1a [Bos grunniens]
Length = 823
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|62632235|gb|AAX89137.1| hypoxia inducible factor-1 alpha [Pantholops hodgsonii]
Length = 823
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|395843414|ref|XP_003794480.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Otolemur
garnettii]
Length = 827
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNNNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|47224749|emb|CAG00343.1| unnamed protein product [Tetraodon nigroviridis]
Length = 593
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA--------NHTEDIRAQRSVFIRLKCTLTSKGR 53
+VDL G SI++ THPCDH E++ LS +++ A+R F+R+KCT+T++GR
Sbjct: 45 QVDLTGHSIFDFTHPCDHEEIRENLSLRTAGKGFDKKGKEMSAERDFFMRMKCTVTTRGR 104
Query: 54 NVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+A++KV+HCTG L + N P EP
Sbjct: 105 TVNLKSASWKVLHCTGQLKMYNGCPPRGLCGFREP------------------------- 139
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
P C V + EPIPHP+N D P+ S+TFL++HS+DMKFTY DE + +
Sbjct: 140 -------------PLTCAVLMCEPIPHPSNIDTPMDSRTFLSRHSMDMKFTYCDERVTEL 186
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G+ P+ + +SV+DF+HA DS ++ + +N C
Sbjct: 187 MGYTPEDLLGRSVYDFYHALDSENVTKSHQNLC 219
>gi|407316772|gb|AFU07568.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
molitrix]
Length = 832
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGMGKKGKELNTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V N PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVCNSCPARVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V + EPIPHP+N D PL S+ FL++HS+DMKFTY D+ + + +G+
Sbjct: 215 ----------PLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMKFTYCDDRVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+P+ + +S +DF+HA DS ++ + +N C
Sbjct: 265 SPEDLLGRSAYDFYHALDSDNVTKSHQNLC 294
>gi|426233494|ref|XP_004010752.1| PREDICTED: hypoxia-inducible factor 1-alpha [Ovis aries]
Length = 764
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 65 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 125 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 151
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 152 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 207
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 208 PEELLGRSIYEYYHALDSDHL 228
>gi|298104182|gb|ADI54941.1| hypoxia inducible factor 1 alpha subunit [Microtus kikuchii]
Length = 828
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|407316762|gb|AFU07563.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
nobilis]
Length = 832
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGMGKKGKELNTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V N PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVCNSCPARVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V + EPIPHP+N D PL S+ FL++HS+DMKFTY D+ + + +G+
Sbjct: 215 ----------PLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMKFTYCDDRVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+P+ + +S +DF+HA DS ++ + +N C
Sbjct: 265 SPEDLLGRSAYDFYHALDSDNVTKSHQNLC 294
>gi|343055703|gb|AEL79603.1| hypoxia-inducible factor 1 alpha subunit [Pantholops hodgsonii]
Length = 823
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|38374005|gb|AAR19225.1| hypoxia-inducible factor 1 alpha subunit [Canis lupus familiaris]
Length = 786
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 104 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 163
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 164 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 190
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 191 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 246
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 247 PEELLGRSIYEYYHALDSDHL 267
>gi|178056663|ref|NP_001116596.1| hypoxia-inducible factor 1-alpha [Sus scrofa]
gi|118136505|gb|ABK62873.1| hypoxia-inducible factor 1alpha [Sus scrofa]
Length = 824
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNNNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|359320073|ref|XP_003639250.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Canis lupus
familiaris]
Length = 732
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|410962416|ref|XP_003987766.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Felis catus]
Length = 733
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|407316752|gb|AFU07558.1| hypoxia-inducible factor 1 alpha subunit [Gymnocypris namensis]
Length = 774
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 118/208 (56%), Gaps = 45/208 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ + S S EP
Sbjct: 183 KSATWKVLHCAGHVRVQERGEDSGDSGFKEP----------------------------- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME-DFLGF 174
P V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE ++ + +G+
Sbjct: 214 ---------PLTYLVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDERIDTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + KSV++++HA DS H+ N
Sbjct: 265 EPDDLLNKSVYEYYHALDSDHLTKTHHN 292
>gi|407316750|gb|AFU07557.1| hypoxia-inducible factor 1 alpha subunit [Lepisosteus platostomus]
Length = 803
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 116/201 (57%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ DL G S+++ THPCDH E++ +L S ++ ++RS F+R+KCTLTS+GR VN
Sbjct: 124 QFDLTGHSVFDFTHPCDHEEMREMLTYRTGSLKKAKEQNSERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH IQ + S+
Sbjct: 184 IKSATWKVLHCTGH---------------------------------IQVYESSDGHNNC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K P V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKE----PPMTYLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQ 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +SV++++HA DS H+
Sbjct: 267 PEDLLGRSVYEYYHALDSDHL 287
>gi|355694631|gb|AER99736.1| hypoxia inducible factor 1, alpha subunit [Mustela putorius furo]
Length = 823
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|291227639|ref|XP_002733787.1| PREDICTED: hypoxia inducible factor, partial [Saccoglossus
kowalevskii]
Length = 777
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 114/205 (55%), Gaps = 43/205 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-----SVFIRLKCTLTSKGRNVN 56
+VDL G SIY+ THPCDH E++ LS + +++ S IR+KCTLT+KGRNVN
Sbjct: 55 QVDLAGHSIYDYTHPCDHEEIREQLSDKPGLPLSSKKKKDNLSFLIRMKCTLTAKGRNVN 114
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+ATYKVI C GH+ + AIQD +
Sbjct: 115 LKSATYKVIQCCGHM---------------------------KTTEAIQD------VSLM 141
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K T C V +GEPIPHPAN ++PL SQTFL++HS+DMKFT+ D+ + + G+
Sbjct: 142 GYKTPATT----CLVVVGEPIPHPANIEIPLDSQTFLSRHSMDMKFTFVDDRIHEITGYQ 197
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAF 200
I KS +DF HA D+ I+ ++
Sbjct: 198 VSDLIGKSAYDFCHALDTDKIEKSY 222
>gi|63028439|gb|AAY27087.1| hypoxia-inducible factor 1 alpha [Microtus oeconomus]
Length = 828
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|395843416|ref|XP_003794481.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Otolemur
garnettii]
Length = 736
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNNNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|255693991|gb|ACU30154.1| hypoxia inducible factor 1 alpha [Litopenaeus vannamei]
Length = 1050
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 53/202 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+VD+MGQS+YE THPCDH EV+ ++SA ++ R F+RLKCTLT+KGR+VN+K+A+
Sbjct: 158 QVDVMGQSLYEYTHPCDHEEVRDLVSAKGPQE---PRHAFLRLKCTLTAKGRSVNLKSAS 214
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKV+ +G +VQ++ E+Q+
Sbjct: 215 YKVVQVSGEVVQHE----------------EDQA-------------------------- 232
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
VA+G P+PHP+N + PL QTF++KHSLDMKFTY D+ + +F G+ P +
Sbjct: 233 -------WLVALGTPVPHPSNIEFPLDKQTFVSKHSLDMKFTYVDDNVGEFCGYGPKELV 285
Query: 181 AKSVFDFHHAQDSFHIQNAFKN 202
+S+++ HHA DS ++ A+K
Sbjct: 286 GRSLYEMHHALDSELVKEAYKT 307
>gi|334310623|ref|XP_001377570.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Monodelphis
domestica]
Length = 1007
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L ++ +RS F+R+KCTLTS+GR +N
Sbjct: 310 QFELTGHSVFDFTHPCDHEELREMLIHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTMN 369
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 370 IKSATWKVLHCTGHI--------------RVYDTCNNQS-------------------QC 396
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 397 GYKK----PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE 452
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 453 PEELLGRSIYEYYHALDSDHL 473
>gi|395504059|ref|XP_003756377.1| PREDICTED: hypoxia-inducible factor 1-alpha [Sarcophilus harrisii]
Length = 811
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L ++ +RS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEELREMLIHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------RVYDTCNNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|361095159|gb|AEW10558.1| HIF-1 alpha [Capra hircus]
Length = 823
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLIKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|449504557|ref|XP_002200394.2| PREDICTED: hypoxia-inducible factor 1-alpha [Taeniopygia guttata]
Length = 825
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ +RS F+R+KCTLTS+GR VN
Sbjct: 138 QFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVN 197
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQ+
Sbjct: 198 IKSATWKVLHCTGHI--------------RVYDTCGNQT-------------------HC 224
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 225 GYKK----PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE 280
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 281 PEELLGRSIYEYYHALDSDHL 301
>gi|50403829|gb|AAT76668.1| hypoxia-inducible factor 2 alpha [Ctenopharyngodon idella]
Length = 835
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGMGKKGKELNTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V N PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVCNGCPARVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V + EPIPHP+N D PL S+ FL++HS+DMKFTY D+ + + +G+
Sbjct: 215 ----------PLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMKFTYCDDRVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+P+ + +S +DF+HA DS ++ + +N C
Sbjct: 265 SPEDLLGRSAYDFYHALDSDNVTKSHQNLC 294
>gi|449278511|gb|EMC86333.1| Hypoxia-inducible factor 1 alpha, partial [Columba livia]
Length = 801
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ +RS F+R+KCTLTS+GR VN
Sbjct: 114 QFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVN 173
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQ+
Sbjct: 174 IKSATWKVLHCTGHI--------------RVYDTCGNQT-------------------HC 200
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 201 GYKK----PPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE 256
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 257 PEELLGRSIYEYYHALDSDHL 277
>gi|296240121|gb|ADH01742.1| hypoxia-inducible factor 2 alpha [Callionymus valenciennei]
Length = 782
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS--------ANHTEDIRAQRSVFIRLKCTLTSKGR 53
+VDL G SI++ THPCDH E++ L+ ++ R F+R+KCT+T++GR
Sbjct: 119 QVDLTGHSIFDFTHPCDHEEIRENLNLKMSGAAFGKQGKEPNTDRDFFMRMKCTMTNRGR 178
Query: 54 NVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTGHL N+ RG SEP
Sbjct: 179 TVNLKSASWKVLHCTGHL------------------KTYNRLSQVLRGP-------SEP- 212
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C V + EPIPHP N ++PL S+TFL++HS+DMKFTY D+++ + +
Sbjct: 213 ------------PLTCAVLMCEPIPHPTNIEMPLESKTFLSRHSMDMKFTYCDDSVTELM 260
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ I +SV+DF+HA DS ++ + +N C
Sbjct: 261 GYSPEDLIGRSVYDFYHALDSDNVTKSHQNLC 292
>gi|87204421|gb|ABD32158.1| hypoxia-inducible factor 1 alpha [Micropogonias undulatus]
Length = 752
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 122/206 (59%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ THPCDH E++ +L + ++ +RS FIR+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFTHPCDHEELREMLVHRTGSKKAKEPNTERSFFIRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ + D+ Q+ + ++ EP
Sbjct: 185 KSATWKVLHCSGHVRVS--------------DSCTEQTTSGQK----------EP----- 215
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PIPHP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 216 --------PVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
D + +SV++++HAQDS H+ N
Sbjct: 268 DDLLNRSVYEYYHAQDSDHLTKTHHN 293
>gi|58332032|ref|NP_001011165.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus (Silurana) tropicalis]
gi|54648070|gb|AAH84989.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus (Silurana) tropicalis]
Length = 328
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 44/207 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ A ++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFELTGHSVFDFTHPCDHEELREMLTFRNGPAKKGKEQITERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ N +P
Sbjct: 184 IKSATWKVLHCTGHMRVYDANNHNHCGYKKP----------------------------- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 215 ---------PMTCMVIICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYE 265
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PD + +SV++++HA DS H+ A N
Sbjct: 266 PDELLGRSVYEYYHALDSDHLTKAHHN 292
>gi|166343757|gb|ABY86629.1| hypoxia-inducible factor 1 alpha [Rana temporaria]
Length = 806
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 45/205 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+ +L G S+++ THPCDH E++ +L S E I +RS F+R+KCTLTS+GR V
Sbjct: 121 QFELTGHSVFDFTHPCDHEELREMLTFRNGPSKKGKEQI-TERSFFLRMKCTLTSRGRTV 179
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+AT+KV+HCTGH M D +Q+
Sbjct: 180 NIKSATWKVLHCTGH--------------MRVYDGCNSQN-------------------H 206
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
G K+ P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE + + G+
Sbjct: 207 CGYKK----PPMTCMVLICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELAGY 262
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
PD + +SV+D++HA DS H+ A
Sbjct: 263 EPDELLGQSVYDYYHALDSDHLTKA 287
>gi|407316768|gb|AFU07566.1| hypoxia-inducible factor 2 alpha subunit [Gymnocypris namensis]
Length = 830
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++R +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGMGKKGKELRTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V + PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVYDGCPARVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V EPI HP+N D PL S+TFL++HS+DMKFTY D+ + + +G+
Sbjct: 215 ----------PLTCVVMWCEPIAHPSNIDTPLDSKTFLSRHSMDMKFTYCDDRVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+P+ + +S +DF+HA DS ++ + +N C
Sbjct: 265 SPEDLLGRSAYDFYHALDSDNVTKSHQNLC 294
>gi|349604849|gb|AEQ00283.1| Hypoxia-inducible factor 1 alpha-like protein, partial [Equus
caballus]
Length = 667
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 120/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ +RS F+R+KCTLTS+GR +N
Sbjct: 18 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTRRSFFLRMKCTLTSRGRTMN 77
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ T NG NQS +
Sbjct: 78 IKSATWKVLHCTGHIHVYDT---NG-----------NQS-------------------QC 104
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 105 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 160
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 161 PEELLGRSIYEYYHALDSDHL 181
>gi|48927335|emb|CAG29396.1| hypoxia inducible factor 1 alpha [Spalax judaei]
Length = 824
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 119/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKEGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTG + + D + ++P+
Sbjct: 184 IKSATWKVLHCTGRI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|67970146|dbj|BAE01417.1| unnamed protein product [Macaca fascicularis]
Length = 826
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 119/201 (59%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPC H E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCGHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P+
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQPQ--C 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 267 PEELLGRSIYEYYHALDSDHL 287
>gi|405968902|gb|EKC33928.1| Hypoxia-inducible factor 1 alpha [Crassostrea gigas]
Length = 668
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 117/207 (56%), Gaps = 47/207 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-----SVFIRLKCTLTSKGRNVN 56
+VDL+GQSIYE HPCDH ++ I +N + + + + F+R+KCTLT+KG+NVN
Sbjct: 127 QVDLVGQSIYEFVHPCDHEDITDIFHSNGRDKKKKKSEEFHHTFFVRMKCTLTNKGKNVN 186
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+ATYKVI +G LV+++ G G+A
Sbjct: 187 LKSATYKVIKFSGKLVKDKIKKECGG-----------------EGNA------------- 216
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
+ IGEPIPHP+N ++PL Q TFL++H++DMKFTY D+ ++D LG+N
Sbjct: 217 -----------PYLLLIGEPIPHPSNIEIPLDQMTFLSRHNMDMKFTYCDDRVKDLLGYN 265
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ KS+FD+HHA DS I A+KN
Sbjct: 266 CSDLMNKSLFDYHHAMDSEVIDQAYKN 292
>gi|166343753|gb|ABY86627.1| hypoxia-inducible factor 1 alpha [Hemiscyllium ocellatum]
Length = 816
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L+G S+++ THPCDH E++ +LS +D +R+ F+R+KCTLTS+GR VN
Sbjct: 123 QFELIGHSVFDFTHPCDHEEMREMLSHRQGLLKKGKDQNTERNFFLRMKCTLTSRGRTVN 182
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH I+ S +
Sbjct: 183 IKSATWKVLHCTGH---------------------------------IRVYKSSNEQTHC 209
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K P C + I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 210 GYKE----PPMTCLILICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQ 265
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
+ + +SV++F+HA DS H+
Sbjct: 266 AEELLGRSVYEFYHALDSDHL 286
>gi|111143467|gb|ABH06560.1| hypoxia inducible factor isoform 2 [Bos grunniens]
Length = 864
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 117/196 (59%), Gaps = 43/196 (21%)
Query: 7 GQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N+K+AT
Sbjct: 170 GHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIKSAT 229
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
+KV+HCTGH+ + D + ++P+ G K+
Sbjct: 230 WKVLHCTGHI-------------------------------HVYDTNSNQPQ--CGYKK- 255
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ +
Sbjct: 256 ---PPMTCSVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELL 312
Query: 181 AKSVFDFHHAQDSFHI 196
+S+++++HA DS H+
Sbjct: 313 GRSIYEYYHALDSDHL 328
>gi|345122364|gb|AEN74951.1| hypoxia inducible factor 1 alpha subunit [Capra hircus]
Length = 823
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 184 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+ +++HA DS H+
Sbjct: 267 PEELLGRSISEYYHALDSDHL 287
>gi|331687645|gb|AED87588.1| hypoxia-inducible factor 1 alpha [Crassostrea virginica]
Length = 701
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 46/206 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR----SVFIRLKCTLTSKGRNVNV 57
+VDL+GQSIYE HPCDH ++ I +N + + + F+R+KCTLT+KG+NVN+
Sbjct: 118 QVDLVGQSIYEFVHPCDHEDITEIFHSNGRDKKKKSSDCYHTFFVRMKCTLTNKGKNVNL 177
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+ATYKVI +G LV+++ G D S P
Sbjct: 178 KSATYKVIKFSGKLVKDEVKREAGG-------------------------DGSAP----- 207
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNP 176
+ IGEPIPHP+N +VPL + TFL++H++DMKFTY D+ ++D LG+N
Sbjct: 208 -----------YLLLIGEPIPHPSNIEVPLDRMTFLSRHNMDMKFTYCDDRVKDLLGYNC 256
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
I KS+FD+HHA DS I ++++N
Sbjct: 257 SDLINKSLFDYHHATDSEVIDHSYRN 282
>gi|215415905|dbj|BAG85183.1| hypoxia-inducible factor 1 alpha [Crassostrea gigas]
Length = 698
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 117/207 (56%), Gaps = 47/207 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQR-----SVFIRLKCTLTSKGRNVN 56
+VDL+GQSIYE HPCDH ++ I +N + + + + F+R+KCTLT+KG+NVN
Sbjct: 118 QVDLVGQSIYEFVHPCDHEDITDIFHSNGRDKKKKKSEEFHHTFFVRMKCTLTNKGKNVN 177
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+ATYKVI +G LV+++ G G+A
Sbjct: 178 LKSATYKVIKFSGKLVKDKIKKECGG-----------------EGNA------------- 207
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
+ IGEPIPHP+N ++PL Q TFL++H++DMKFTY D+ ++D LG+N
Sbjct: 208 -----------PYLLLIGEPIPHPSNIEIPLDQMTFLSRHNMDMKFTYCDDRVKDLLGYN 256
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ KS+FD+HHA DS I A+KN
Sbjct: 257 CSDLMNKSLFDYHHAMDSEVIDQAYKN 283
>gi|58272373|gb|AAW69834.1| hypoxia-inducible factor 1 alpha [Gymnocypris przewalskii]
Length = 773
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 123 QFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 182
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC GH+ + RG +D DS +E
Sbjct: 183 KSATWKVLHCAGHVRVQE------------------------RG---EDSGDSGFKE--- 212
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I EPIPHP+N +VPL S+T L++H+LDMKF+Y DE + + +G+ P
Sbjct: 213 -------SPLTYLVLICEPIPHPSNIEVPLDSKTSLSRHTLDMKFSYCDERITELMGYEP 265
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
D + KSV++++HA DS H+ N
Sbjct: 266 DDLLNKSVYEYYHALDSDHLTKTHHN 291
>gi|348501488|ref|XP_003438301.1| PREDICTED: endothelial PAS domain-containing protein 1 [Oreochromis
niloticus]
Length = 879
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT--------EDIRAQRSVFIRLKCTLTSKGR 53
+V+L G SI++ THPCDH E++ LS T +++ +R F+R+KCT+T++GR
Sbjct: 124 QVELTGHSIFDFTHPCDHDEIRENLSLKTTGSGFGKKGKELSTERDFFMRMKCTVTNRGR 183
Query: 54 NVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+A++KV+HCTG L + N P EP
Sbjct: 184 TVNLKSASWKVLHCTGQLRMYNSCPPRVLCGFKEP------------------------- 218
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
P C V + EPIPHP+N D PL S+TFL++HS+DMKFTY DE + +
Sbjct: 219 -------------PLTCAVLMCEPIPHPSNIDTPLDSKTFLSRHSMDMKFTYCDERVTEL 265
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G+ P+ + +S++DF+HA DS + + +N C
Sbjct: 266 MGYTPEDLLGRSIYDFYHALDSDSVTKSHQNLC 298
>gi|344273483|ref|XP_003408551.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Loxodonta
africana]
Length = 871
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 173 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 232
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ D NQS +
Sbjct: 233 IKSATWKVLHCTGHI--------------HVYDTNSNQS-------------------QC 259
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPIPHP+N +V + S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 260 GYKK----PPMTCLVLICEPIPHPSNIEVRIDSKTFLSRHSLDMKFSYCDERITELMGYE 315
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S++D++HA DS H+
Sbjct: 316 PEELLGRSIYDYYHALDSDHL 336
>gi|126697516|gb|ABO26715.1| hypoxia-inducible factor 1 alpha [Esox lucius]
Length = 763
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 43/207 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ DL G S++E HPCDH E++ +L ++ +++ RS F+R+KCTLTS+GR VN
Sbjct: 130 QFDLTGLSVFEYAHPCDHEELREMLVYRTGTSKKSKEPNTDRSFFLRMKCTLTSRGRTVN 189
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
VK+AT+KV+HC+GH+ ++ PA GS
Sbjct: 190 VKSATWKVLHCSGHVRVHEVPAEQGS---------------------------------C 216
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K P V + +PIPHP+N + PL ++TFL++H+L+MKFTY DE + + +G+N
Sbjct: 217 GHKEV----PVPYLVLVCDPIPHPSNIEAPLDTKTFLSRHTLNMKFTYCDERITELMGYN 272
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
P+ + +SV++++HA DS H+ N
Sbjct: 273 PEDLLNRSVYEYYHALDSDHLTKTHHN 299
>gi|407316764|gb|AFU07564.1| hypoxia-inducible factor 2 alpha subunit [Acipenser sinensis]
Length = 852
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +D+ +R F+R+KCT+T++GR
Sbjct: 121 QVELTGHSIFDFTHPCDHDEMRENLSLRNGLGFGKKNKDLNTERDFFMRMKCTVTNRGRT 180
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTG + V N P EP
Sbjct: 181 VNLKSASWKVLHCTGQVKVYNSCPPHTLCGFKEP-------------------------- 214
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C V + EPIPHP+N D+PL S+TFL++HS+DMKFTY DE + + +
Sbjct: 215 ------------PLTCVVMMCEPIPHPSNIDMPLDSKTFLSRHSMDMKFTYCDERVTELM 262
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G+ P+ + +SV++F+HA DS + + +N C
Sbjct: 263 GYWPEELLGRSVYEFYHALDSDRMTKSHQNLC 294
>gi|333610041|gb|AEF59497.1| hypoxia-inducible factor 2 alpha [Lepisosteus oculatus]
Length = 315
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +D+ +R F+R+KCT+TS+GR
Sbjct: 114 QVELTGHSIFDFTHPCDHDEIRENLSFKPGQGFGKKNKDLNTERDFFMRMKCTVTSRGRT 173
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTGHL V N P EP
Sbjct: 174 VNLKSASWKVLHCTGHLKVYNSCPPHVLCGFKEP-------------------------- 207
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C + + PIPHP+N D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 208 ------------PLTCVIMMCVPIPHPSNIDMPLDSKTFLSRHSMDMKFTYCDDRVTELM 255
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G+ P+ + +SV++F+HA DS + + +N C
Sbjct: 256 GYCPEDLLGRSVYEFYHALDSDSMTKSHQNLC 287
>gi|430024072|gb|AGA35555.1| hypoxia inducible factor alpha 1, partial [Etroplus suratensis]
Length = 595
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 121/206 (58%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ THPCD E++ +L + T++ A+RS F+R+KCTLTS+GR VNV
Sbjct: 8 QFDLTGHSVFDFTHPCDQEELREMLIHRTGSKKTKEPNAERSFFLRMKCTLTSRGRTVNV 67
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ ++Q+D + G EP
Sbjct: 68 KSATWKVLHCSGHV-----------------RVYDSQTDESISGQ-------KEP----- 98
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PIPHP+N +VPL ++TFL++H++DMKFTY DE + + LG++P
Sbjct: 99 --------PVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELLGYDP 150
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HA DS H+ N
Sbjct: 151 EDLLNRSVYEYYHALDSDHLTKTHHN 176
>gi|190337520|gb|AAI63440.1| Epas1 protein [Danio rerio]
Length = 834
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGIGKKGKELSTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V N PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVCNGCPARVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V + EPI HP+N D PL S+TFL++HS+DMK+TY DE + + +G+
Sbjct: 215 ----------PLTCVVMMCEPIVHPSNIDTPLDSKTFLSRHSMDMKYTYCDERVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
NP+ + +S ++F+HA D+ ++ + +N C
Sbjct: 265 NPEDLLGRSAYEFYHALDAENVTKSHQNLC 294
>gi|407316770|gb|AFU07567.1| hypoxia-inducible factor 2 alpha subunit [Polyodon spathula]
Length = 852
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +D+ +R F+R+KCT+T++GR VN
Sbjct: 121 QVELTGHSIFDFTHPCDHEEMRENLSLRNGLGKKIKDLNTERDFFMRMKCTVTNRGRTVN 180
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTG + V N P EP
Sbjct: 181 LKSASWKVLHCTGQVKVYNSCPPHTLCGFKEP---------------------------- 212
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V I EPIPHP+N D+PL S+TFL++H++D+KFTY DE + + +G+
Sbjct: 213 ----------PLTCVVMICEPIPHPSNIDMPLDSKTFLSRHTMDLKFTYCDERITELMGY 262
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
P+ + +SV++F+HA DS + + +N C
Sbjct: 263 CPEELLGRSVYEFYHALDSDSMTKSHQNLC 292
>gi|89886285|ref|NP_001034895.1| endothelial PAS domain-containing protein 1 [Danio rerio]
gi|87242613|gb|ABD33838.1| hypoxia inducible factor 2 alpha [Danio rerio]
Length = 832
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGIGKKGKELSTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V N PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVCNGCPARVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V + EPI HP+N D PL S+TFL++HS+DMK+TY DE + + +G+
Sbjct: 215 ----------PLTCVVMMCEPIVHPSNIDTPLDSKTFLSRHSMDMKYTYCDERVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
NP+ + +S ++F+HA D+ ++ + +N C
Sbjct: 265 NPEDLLGRSAYEFYHALDAENVTKSHQNLC 294
>gi|54650876|gb|AAV37017.1| GH16921p [Drosophila melanogaster]
Length = 776
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 294
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 295 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 337
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG++P + S+F H DS + FK+
Sbjct: 338 MHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKS 372
>gi|290760624|gb|ADD59897.1| hypoxia-inducible factor 2 alpha [Hemiscyllium ocellatum]
Length = 709
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ L+ + D+ +R F+R+KCT+T++GR VN
Sbjct: 77 QVELTGHSIFDFTHPCDHEEIRENLTIKNGFGKKHRDMNTERDFFMRMKCTVTNRGRTVN 136
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+AT+KV+HCTGH+ + N A EP
Sbjct: 137 LKSATWKVLHCTGHIKIYNACQAHTLCGYKEP---------------------------- 168
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C + + EPI HP+N D+PL S+TFL++HS+DMKFTY DE + +G+
Sbjct: 169 ----------PLTCLIMMCEPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDERIAALMGY 218
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
P+ + +SV++F+HA DS H+ + +N C
Sbjct: 219 CPEELLGRSVYEFYHALDSDHMIKSHQNLC 248
>gi|87204423|gb|ABD32159.1| hypoxia-inducible factor 2 alpha [Micropogonias undulatus]
Length = 847
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS--------ANHTEDIRAQRSVFIRLKCTLTSKGR 53
+VDL G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR
Sbjct: 128 QVDLTGHSIFDFTHPCDHEEIRENLSLKTAGTGFGKKGKELSTERDFFMRMKCTVTNRGR 187
Query: 54 NVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTG L + D P
Sbjct: 188 TVNLKSASWKVLHCTGQL---------------------------------KMYDSCPPR 214
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +T C V + EPIPHP+N D P+ S+TFL++HS+DMKFTY DE + + +
Sbjct: 215 GLCGFKEPPLT----CAVLMCEPIPHPSNIDTPMDSKTFLSRHSMDMKFTYCDERVTELM 270
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G+ P+ + +S++DF+HA DS + + N C
Sbjct: 271 GYTPEDLLGRSIYDFYHALDSDSVTKSHHNLC 302
>gi|407316774|gb|AFU07569.1| hypoxia-inducible factor 2 alpha subunit [Schizothorax prenanti]
Length = 833
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGMGKKGKELSTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V N PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVYNGCPARVLCGFKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V EPI HP+N D PL S+TFL++HS+DMKFTY D+ + + +G+
Sbjct: 215 ----------PLACVVLWCEPIAHPSNIDTPLDSKTFLSRHSMDMKFTYCDDRVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+P+ + +S ++F+HA DS ++ + +N C
Sbjct: 265 SPEDLLGRSAYEFYHALDSDNVTKSHQNLC 294
>gi|24651293|ref|NP_524584.2| similar, isoform A [Drosophila melanogaster]
gi|13124829|sp|Q24167.2|SIMA_DROME RecName: Full=Protein similar
gi|10726861|gb|AAF57008.2| similar, isoform A [Drosophila melanogaster]
Length = 1507
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 294
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 295 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 337
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG++P + S+F H DS + FK+
Sbjct: 338 MHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKS 372
>gi|223468713|gb|ACM89953.1| RE63002p [Drosophila melanogaster]
Length = 1507
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 294
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 295 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 337
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG++P + S+F H DS + FK+
Sbjct: 338 MHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKS 372
>gi|407316766|gb|AFU07565.1| hypoxia-inducible factor 2 alpha subunit [Lepisosteus platostomus]
Length = 851
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +D+ +R F+R+KCT+TS+GR
Sbjct: 120 QVELTGHSIFDFTHPCDHDEIRENLSFKPGQGFGKKNKDLNTERDFFMRMKCTVTSRGRT 179
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTGHL V N P EP
Sbjct: 180 VNLKSASWKVLHCTGHLKVYNSCPPHVLCGFKEP-------------------------- 213
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C + + PIPHP+N D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 214 ------------PLTCVIMMCVPIPHPSNIDMPLDSKTFLSRHSMDMKFTYCDDRVTELM 261
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G+ P+ + +SV++F+HA DS + + +N C
Sbjct: 262 GYCPEDLLGRSVYEFYHALDSDSMTKSHQNLC 293
>gi|21483612|gb|AAM52781.1| SD25933p [Drosophila melanogaster]
Length = 403
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 112/215 (52%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N + G L+
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVN----AKGERLL----------------------- 299
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
+AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 300 ----------------------MAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 337
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG++P + S+F H DS + FK+
Sbjct: 338 MHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKS 372
>gi|407316760|gb|AFU07562.1| hypoxia-inducible factor 2 alpha subunit [Polypterus senegalus]
Length = 848
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 45/211 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS H + + R F+R+KCT+T++GR
Sbjct: 121 QVELTGHSIFDFTHPCDHEEIRENLSPKHGPGFSKKNREASSVRDFFMRMKCTVTNRGRT 180
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+A++KV+HCTGHL + + P
Sbjct: 181 VNLKSASWKVLHCTGHL---------------------------------KMYNSHHPHT 207
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
G K P +C + I EPIPHP N D+PL S+T+L++HS+DMKFTY DE + + +G
Sbjct: 208 LCGFKE----PPLNCVIMICEPIPHPINIDIPLDSKTYLSRHSMDMKFTYCDERITELMG 263
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
++P+ + +S++DF+HA DS + + N C
Sbjct: 264 YSPEELLGRSIYDFYHALDSDSLTKSHHNLC 294
>gi|221460588|ref|NP_001138129.1| similar, isoform B [Drosophila melanogaster]
gi|220903258|gb|ACL83585.1| similar, isoform B [Drosophila melanogaster]
Length = 426
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 112/215 (52%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N + G L+
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVN----AKGERLL----------------------- 299
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
+AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 300 ----------------------MAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 337
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG++P + S+F H DS + FK+
Sbjct: 338 MHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKS 372
>gi|345315439|ref|XP_001510942.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ornithorhynchus
anatinus]
Length = 814
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 43/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L S + +RS F+R+KCTLTS+GR VN
Sbjct: 136 QFELTGHSVFDFTHPCDHEELREMLTHRNGSVKKGREQNTERSFFLRMKCTLTSRGRTVN 195
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+A +KV+HCTGH+ D NQ+ +
Sbjct: 196 IKSAAWKVLHCTGHI--------------RVYDACSNQA-------------------QC 222
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K+ P C V I EPI HP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 223 GYKK----PPMTCLVLICEPILHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE 278
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +S+++++HA DS H+
Sbjct: 279 PEELLGRSIYEYYHALDSDHL 299
>gi|294961106|gb|ADF50044.1| hypoxia-inducible factor 2 alpha [Megalobrama amblycephala]
Length = 835
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 45/210 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGMGKKGKELNTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+K+A++KV+HCTGHL V N PA EP
Sbjct: 183 LKSASWKVLHCTGHLKVCNGCPARVLCGYKEP---------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P C V + EPIPHP+N D PL S+ FL++HS+DMK TY D+ + + +G+
Sbjct: 215 ----------PLTCVVMMCEPIPHPSNIDTPLDSKAFLSRHSMDMKSTYCDDRVTELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+P+ + +S +DF+HA DS ++ + +N C
Sbjct: 265 SPEDLLGRSAYDFYHALDSDNVTKSHQNLC 294
>gi|296240119|gb|ADH01741.1| hypoxia-inducible factor 1 alpha [Callionymus valenciennei]
Length = 703
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 51/206 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
++DL G S++ THPCD E++ L + D+ + RS F+R+KCTLTS+GR VNV
Sbjct: 125 QLDLAGHSVFNFTHPCDQEELRETLQHRAGTKKSRDVNSARSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GHL + EP D GS
Sbjct: 185 KSATWKVLHCSGHLYDS-----------EPSD-----------GSV-------------- 208
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
V I +PIPHP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 209 ----------PYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 258
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
D + +SV++++HA DS H+ N
Sbjct: 259 DELLNRSVYEYYHALDSNHLTKTHHN 284
>gi|225581189|gb|ACN94757.1| GA20714 [Drosophila miranda]
Length = 1575
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 62/214 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-HTEDIRAQ-----------RSVFIRLKCTLT 49
K+D +GQ I+E +H CDH+E+K LS H ++ + R +F+RLKCTLT
Sbjct: 202 KIDTLGQPIWEYSHQCDHAEIKEALSWKRHGTPVKDEQQLESGVSTHHRDLFVRLKCTLT 261
Query: 50 SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDD 109
S+GR++N+K+ATYKVIH TGHLV N
Sbjct: 262 SRGRSINIKSATYKVIHITGHLVVN----------------------------------- 286
Query: 110 SEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETM 168
G+ RV +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+ M
Sbjct: 287 -------GKGERV-------LIAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDKM 332
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
LG+ P+ + S+F H DS + FK+
Sbjct: 333 LGLLGYAPNDLLDTSLFVCQHGADSERLMATFKS 366
>gi|126697510|gb|ABO26712.1| hypoxia-inducible factor 1 alpha [Acipenser gueldenstaedtii]
Length = 784
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 42/201 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ HPCDH E++ +L S ++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFELTGHSLFDFAHPCDHEELREMLTHRTGSTKKGKEHNTERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + +P +N
Sbjct: 184 IKSATWKVLHCTGHI-----------RVCDPSKGEQNN---------------------C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K R P V I +PIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKER----PMTSMVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQ 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +SV++++HA DS H+
Sbjct: 268 PEDLLGRSVYEYYHALDSDHL 288
>gi|195574995|ref|XP_002105468.1| similar [Drosophila simulans]
gi|194201395|gb|EDX14971.1| similar [Drosophila simulans]
Length = 1493
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 110/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 294
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 295 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 337
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG+ P + S+F H DS + FK+
Sbjct: 338 MHDLLGYLPKDLLDTSLFSCQHGADSERLMATFKS 372
>gi|194905710|ref|XP_001981242.1| GG11733 [Drosophila erecta]
gi|190655880|gb|EDV53112.1| GG11733 [Drosophila erecta]
Length = 1493
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 202 KIDTLGQQIWEYSHQCDHAEIKEALSLKREIAQKVKDEPQQDLGVSTHHRDLFVRLKCTL 261
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 262 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 289
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 290 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 332
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG++P + S+F H DS + FK+
Sbjct: 333 MHDLLGYSPKDLLDTSLFLCQHGADSERLMATFKS 367
>gi|1174074|gb|AAC47303.1| similar [Drosophila melanogaster]
Length = 1505
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 110/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 294
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 295 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 337
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG+ P + S+F H DS + FK+
Sbjct: 338 MHDLLGYLPKDLLDTSLFSCQHGADSERLMATFKS 372
>gi|195505070|ref|XP_002099350.1| GE10859 [Drosophila yakuba]
gi|194185451|gb|EDW99062.1| GE10859 [Drosophila yakuba]
Length = 1517
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 205 KIDTLGQQIWEYSHQCDHAEIKEALSLKREIAQKVKDEPQQDSGVSTHHRDLFVRLKCTL 264
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 265 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 292
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 293 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 335
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M+D LG+ P + S+F H DS + FK+
Sbjct: 336 MQDLLGYLPKDLLDTSLFLCQHGADSERLMATFKS 370
>gi|195159266|ref|XP_002020503.1| GL14029 [Drosophila persimilis]
gi|194117272|gb|EDW39315.1| GL14029 [Drosophila persimilis]
Length = 1525
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 62/214 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-ANHTEDIRAQ-----------RSVFIRLKCTLT 49
K+D +GQ I+E +H CDH+E+K LS H ++ + R +F+RLKCTLT
Sbjct: 198 KIDTLGQPIWEYSHQCDHAEIKEALSLKRHGTAVKDEQQLESGVSTHHRDLFVRLKCTLT 257
Query: 50 SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDD 109
S+GR++N+K+ATYKVIH TGHLV N
Sbjct: 258 SRGRSINIKSATYKVIHITGHLVVN----------------------------------- 282
Query: 110 SEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETM 168
G+ RV +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+ M
Sbjct: 283 -------GKGERV-------LIAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDKM 328
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
LG+ P+ + S+F H DS + FK+
Sbjct: 329 LGLLGYAPNDLLDTSLFVCQHGADSERLMATFKS 362
>gi|198449612|ref|XP_001357647.2| GA20714 [Drosophila pseudoobscura pseudoobscura]
gi|198130685|gb|EAL26781.2| GA20714 [Drosophila pseudoobscura pseudoobscura]
Length = 1559
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 62/214 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-ANHTEDIRAQ-----------RSVFIRLKCTLT 49
K+D +GQ I+E +H CDH+E+K LS H ++ + R +F+RLKCTLT
Sbjct: 198 KIDTLGQPIWEYSHQCDHAEIKEALSLKRHGTAVKDEQQLESGVSTHHRDLFVRLKCTLT 257
Query: 50 SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDD 109
S+GR++N+K+ATYKVIH TGHLV N
Sbjct: 258 SRGRSINIKSATYKVIHITGHLVVN----------------------------------- 282
Query: 110 SEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETM 168
G+ RV +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+ M
Sbjct: 283 -------GKGERV-------LIAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDKM 328
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
LG+ P+ + S+F H DS + FK+
Sbjct: 329 LGLLGYAPNDLLDTSLFVCQHGADSERLMATFKS 362
>gi|407316748|gb|AFU07556.1| hypoxia-inducible factor 1 alpha subunit [Acipenser sinensis]
Length = 763
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 42/201 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ HPCDH E++ +L S ++ +RS F+R+KCTLTS+GR VN
Sbjct: 124 QFELTGHSLFDFAHPCDHEELREMLTHRTGSTKKGKEHNTERSFFLRMKCTLTSRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + +P +N
Sbjct: 184 IKSATWKVLHCTGHI-----------RVCDPSKGEQNN---------------------C 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K R P V I +PIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 212 GYKER----PMTSMVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQ 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +SV++++HA DS H+
Sbjct: 268 PEDLLGRSVYEYYHALDSDHL 288
>gi|83778886|gb|ABC47310.1| hypoxia-inducible factor 1 alpha [Oryzias melastigma]
Length = 748
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL GQ++++ THPCD E++ +L + ++ ++RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGQNVFDYTHPCDQEELREMLVYRTGSKKAKEPNSERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ N A S G
Sbjct: 185 KSATWKVLHCSGHVHVNGVQAEQNSN---------------------------------G 211
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
+K P V I +PIPHP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 212 QKE----PPVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +S+++++HA DS H+ N
Sbjct: 268 EDLLNRSIYEYYHALDSDHLTKTHHN 293
>gi|126697526|gb|ABO26720.1| hypoxia-inducible factor 1 alpha [Platichthys flesus]
Length = 778
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 119/206 (57%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ THPCD E++ +L + T++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFTHPCDQEELREMLIHKTGSKKTKESNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ T +++ T G
Sbjct: 185 KSATWKVLHCSGHVRVYDT-----------------KTEETSNG---------------- 211
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
+ P V I +P+PHP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 212 ----LKEAPVPYLVLICDPVPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HA DS H+ + N
Sbjct: 268 EDLLNRSVYEYYHAMDSDHLTKSHHN 293
>gi|407316756|gb|AFU07560.1| hypoxia-inducible factor 1 alpha subunit [Polyodon spathula]
Length = 784
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 42/201 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ HPCDH E++ +L S ++ +RS F+R+KCTLT++GR VN
Sbjct: 124 QFELTGHSLFDFAHPCDHEELREVLTHRTGSTKKGKEQNTERSFFLRMKCTLTNRGRTVN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ P QDN + EP
Sbjct: 184 IKSATWKVLHCTGHIRVCDPPKGE-------QDNCGYK----------------EP---- 216
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V I +PIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 217 ---------PMTSMVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQ 267
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +SV++++HA DS H+
Sbjct: 268 PEDLLGRSVYEYYHALDSDHL 288
>gi|223648404|gb|ACN10960.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 752
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 118/207 (57%), Gaps = 43/207 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
++DL G S++E THPCDH E++ +L ++ +++ +RS F+R+KCTLT+ GR VN
Sbjct: 126 QIDLTGLSVFEYTHPCDHEELREMLVHRTGTSKKSKEPNTERSFFLRMKCTLTNSGRTVN 185
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
VK+AT+KV+HC+GH+ ++ PA
Sbjct: 186 VKSATWKVLHCSGHVRVHEAPAEQSPG--------------------------------- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K V V + +PIPHP+N + PL ++TFL++H+LDMKFTY DE + + +G++
Sbjct: 213 GHKEPCVP----YLVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGYD 268
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
P+ + +SV+++++A DS H+ N
Sbjct: 269 PEDLLNRSVYEYYYAMDSDHLMKTHHN 295
>gi|126697514|gb|ABO26714.1| hypoxia-inducible factor 1 alpha [Thymallus thymallus]
Length = 745
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 122/208 (58%), Gaps = 45/208 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
++DL G S++E THPCDH E++ +L ++ +++ +RS F+R+KCTLTS+GR VN
Sbjct: 125 QIDLTGLSMFEYTHPCDHEELREMLVHRTGTSKKSKEPNTERSFFLRMKCTLTSRGRTVN 184
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
VK+AT+KV+HC+GH+ ++ PA E+
Sbjct: 185 VKSATWKVLHCSGHVRVHEAPA----------------------------------EQSP 210
Query: 117 GEKRRVVTEPSHCF-VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
G + EPS + V + +PIPHP+N + PL ++TFL++H+LDMKFTY DE + + +
Sbjct: 211 GAHK----EPSVPYLVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITVLMDY 266
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+P+ + SV++++HA DS H+ A N
Sbjct: 267 DPEDLLNHSVYEYYHALDSDHLMKAHHN 294
>gi|157114229|ref|XP_001657997.1| hypoxia-inducible factor [Aedes aegypti]
gi|108883603|gb|EAT47828.1| AAEL001097-PA [Aedes aegypti]
Length = 357
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 114/215 (53%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH---TEDIRA----------QRSVFIRLKCTL 48
++D+MGQ I++ +H CDH E++ L+ H +E ++ R F+RLKCTL
Sbjct: 144 QIDMMGQPIWDYSHQCDHEELREALNGRHHSPSELLKGVANSDCKPMENRDFFLRLKCTL 203
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR+VN+K+A+YKVIH TGH+
Sbjct: 204 TSRGRSVNIKSASYKVIHVTGHIAC----------------------------------- 228
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
+E G+++ VA+ P+PHP+N +VPL S TFL+KHSLDMKF+Y D+
Sbjct: 229 -----KENGQRQ---------LVAVARPLPHPSNIEVPLDSSTFLSKHSLDMKFSYVDDK 274
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M LG+NP + KS+++ HH DS H+ FKN
Sbjct: 275 MYALLGYNPADLMGKSLYECHHGIDSDHLMGTFKN 309
>gi|185134444|ref|NP_001117760.1| hypoxia-inducible factor 1-alpha [Oncorhynchus mykiss]
gi|32469773|sp|Q98SW2.1|HIF1A_ONCMY RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|13561506|gb|AAK30364.1|AF304864_1 hypoxia-inducible factor 1 alpha [Oncorhynchus mykiss]
Length = 766
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 124/208 (59%), Gaps = 45/208 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
++DL G S++E THPCDH E++ +L ++ +++ +RS F+R+KCTLT++GR VN
Sbjct: 126 QIDLTGLSVFEYTHPCDHEELREMLVHRTGTSKKSKEPNTERSFFLRMKCTLTNRGRTVN 185
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
VK+AT+KV+HC+ H+ +++PA E+
Sbjct: 186 VKSATWKVLHCSDHVRVHESPA----------------------------------EQIP 211
Query: 117 GEKRRVVTEPSHCF-VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
G + EPS + V + +PIPHP+N + PL ++TFL++H+LDMKFTY DE + + +G+
Sbjct: 212 GGHK----EPSVPYLVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGY 267
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+P+ + +SV++++HA DS H+ N
Sbjct: 268 DPEDLLNRSVYEYYHALDSDHLMKTHHN 295
>gi|6644408|gb|AAF21052.1|AF212989_1 hypoxia-inducible factor 2 alpha [Coturnix coturnix]
Length = 870
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGPGFGKKNKEMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNTCP----------------------------------PH 208
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K ++T C + + EPI HP+N D+PL S+TF+++HS+DMKFTY D+ + + +
Sbjct: 209 TLCGYKEPLLT----CLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELI 264
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +SV++F+HA DS ++ + +N C
Sbjct: 265 GYHPEELLGRSVYEFYHALDSENMTKSHQNLC 296
>gi|327280975|ref|XP_003225226.1| PREDICTED: endothelial PAS domain-containing protein 1-like [Anolis
carolinensis]
Length = 871
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGPGFGKKNKEMSMERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P
Sbjct: 183 VNLKSATWKVLHCTGQIKVYNTCP----------------------------------PH 208
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C V + EPI HP+N D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 209 ALCGYKEPLLS----CLVLMCEPIQHPSNTDIPLDSKTFLSRHSMDMKFTYCDDRITELV 264
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++PD + +S ++F+HA DS ++ + +N C
Sbjct: 265 GYHPDELLGRSAYEFYHALDSENMTKSHQNLC 296
>gi|395829787|ref|XP_003788024.1| PREDICTED: endothelial PAS domain-containing protein 1 [Otolemur
garnettii]
Length = 912
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 171 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 230
Query: 55 VNVKAATYKVIHCTGH--LVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+AT+KV+HCTG + N P SN + EP +
Sbjct: 231 VNLKSATWKVLHCTGQVKVYDNCPPHSNLCSYKEPLLS---------------------- 268
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + +
Sbjct: 269 ----------------CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITEL 312
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS H+ + +N C
Sbjct: 313 IGYHPEELLGRSAYEFYHALDSEHMTKSHQNLC 345
>gi|407316754|gb|AFU07559.1| hypoxia-inducible factor 1 alpha subunit [Protopterus annectens]
Length = 813
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 43/198 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ HPCDH E++ +L+ + +RS F+R+KCTLTS+GR VN
Sbjct: 121 QFELTGHSVFDFMHPCDHEELREMLTHRIGPVKKGKGQSTERSFFLRMKCTLTSRGRTVN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HC+GH+ E+ SD T G EP
Sbjct: 181 IKSATWKVLHCSGHI-----------------RVYESGSDQTHCGF-------KEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G++
Sbjct: 213 ---------PLTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYD 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
P+ + SV++++HA DS
Sbjct: 264 PEDLLNHSVYEYYHALDS 281
>gi|157112802|ref|XP_001657624.1| hypoxia-inducible factor [Aedes aegypti]
gi|108868294|gb|EAT32521.1| AAEL015383-PA [Aedes aegypti]
Length = 317
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 114/215 (53%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH---TEDIRA----------QRSVFIRLKCTL 48
++D+MGQ I++ +H CDH E++ L+ H +E ++ R F+RLKCTL
Sbjct: 143 QIDMMGQPIWDYSHQCDHEELREALNGRHHSPSELLKGVANSDCKPMENRDFFLRLKCTL 202
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR+VN+K+A+YKVIH TGH+
Sbjct: 203 TSRGRSVNIKSASYKVIHVTGHIAC----------------------------------- 227
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
+E G+++ VA+ P+PHP+N +VPL S TFL+KHSLDMKF+Y D+
Sbjct: 228 -----KENGQRQ---------LVAVARPLPHPSNIEVPLDSSTFLSKHSLDMKFSYVDDK 273
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M LG+NP + KS+++ HH DS H+ FKN
Sbjct: 274 MYALLGYNPADLMGKSLYECHHGIDSDHLMGTFKN 308
>gi|195341439|ref|XP_002037317.1| GM12862 [Drosophila sechellia]
gi|194131433|gb|EDW53476.1| GM12862 [Drosophila sechellia]
Length = 1276
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 109/215 (50%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 209 KIDTLGQQIWEYSHQCDHAEIKDALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 268
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 269 TSRGRSINIKSASYKVIHITGHLVVNAK-------------------------------- 296
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
GE+ +AIG PIPHP+N ++PL + TFLTKHSLDM FTY D+
Sbjct: 297 --------GER---------LLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMHFTYVDDK 339
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M D LG+ P + S+F H DS + FK+
Sbjct: 340 MHDLLGYLPKDLLDTSLFSCQHGADSERLMATFKS 374
>gi|347968906|ref|XP_311959.5| AGAP002942-PA [Anopheles gambiae str. PEST]
gi|333467787|gb|EAA07597.6| AGAP002942-PA [Anopheles gambiae str. PEST]
Length = 1726
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 113/214 (52%), Gaps = 62/214 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------TEDIRAQ--RSVFIRLKCTL 48
++D+MGQ I++ +H CDH E++ L+ H D R R F+RLKCTL
Sbjct: 268 QIDIMGQPIWDYSHQCDHDELREALNGRHHSPSELLNGVANSDCRPMENRDFFLRLKCTL 327
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR+VN+K+A+YKV+H TGH+ A +DK+
Sbjct: 328 TSRGRSVNIKSASYKVLHVTGHI-------------------------------ACKDKE 356
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
G+++ VAI P+PHPAN +VPL S TFLT+H+L MKF+Y D+
Sbjct: 357 --------GQRQ---------LVAIARPLPHPANIEVPLGSSTFLTQHTLGMKFSYVDDI 399
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
M LG+ P + KS++D HH D+ H+ + FK
Sbjct: 400 MLSLLGYKPSDLLGKSLYDCHHGTDAEHLMSTFK 433
>gi|449270823|gb|EMC81472.1| Endothelial PAS domain-containing protein 1 [Columba livia]
Length = 874
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 120/212 (56%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++++ +R F+R+KCT+T++GR
Sbjct: 125 QVELTGHSIFDFTHPCDHEEIRENLSLKNGPGFGKKSKEMSTERDFFMRMKCTVTNRGRT 184
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P
Sbjct: 185 VNLKSATWKVLHCTGQVKVYNTCP----------------------------------PH 210
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K ++T C + + EPI HP+N D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 211 TLCGYKEPLLT----CLIIMCEPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELI 266
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS + + +N C
Sbjct: 267 GYHPEELLGRSAYEFYHALDSESMTKSHQNLC 298
>gi|449496328|ref|XP_002194260.2| PREDICTED: endothelial PAS domain-containing protein 1 [Taeniopygia
guttata]
Length = 878
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 120/212 (56%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++++ +R F+R+KCT+T++GR
Sbjct: 150 QVELTGHSIFDFTHPCDHEEIRENLSLKNGPGFGKKSKEMSTERDFFMRMKCTVTNRGRT 209
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P
Sbjct: 210 VNLKSATWKVLHCTGQVKVYNTCP----------------------------------PH 235
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K ++T C + + EPI HP+N D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 236 TLCGYKEPLLT----CLIIMCEPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELI 291
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS + + +N C
Sbjct: 292 GYHPEELLGRSAYEFYHALDSESMTKSHQNLC 323
>gi|326915260|ref|XP_003203937.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Meleagris gallopavo]
Length = 944
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++++ +R F+R+KCT+T++GR
Sbjct: 199 QVELTGHSIFDFTHPCDHEEIRENLSLKTGPGFGKKSKEMSTERDFFMRMKCTVTNRGRT 258
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P
Sbjct: 259 VNLKSATWKVLHCTGQVKVYNTCP----------------------------------PH 284
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K ++T C + + EPI HP+N D+PL S+TF+++HS+DMKFTY D+ + + +
Sbjct: 285 TLCGYKEPLLT----CLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELI 340
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 341 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 372
>gi|223648522|gb|ACN11019.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 802
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 49/202 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----SANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ DL G S++E THPCDH E++ IL ++ ++ +RS F+R+KCTLTS+GR VN
Sbjct: 176 QFDLTGLSVFEYTHPCDHEELREILVHRTGTSKKSKGPNTERSFFLRMKCTLTSRGRTVN 235
Query: 57 VKAATYKVIHCTGHLV-QNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
VK+AT+KV+HC+GH+ Q P + EP
Sbjct: 236 VKSATWKVLHCSGHVAPAEQNPCGH-----------------------------KEP--- 263
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P V + +PIPHP+N + PL ++TFL++H+LDMKFTY DE + + +G+
Sbjct: 264 ----------PVSYLVLVCDPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGY 313
Query: 175 NPDIFIAKSVFDFHHAQDSFHI 196
+P+ + +SV++++HA DS H+
Sbjct: 314 DPEDLLNRSVYEYYHALDSDHL 335
>gi|125654604|gb|AAZ95453.2| hypoxia-inducible factor [Dicentrarchus labrax]
Length = 754
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 120/206 (58%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + +++ RS F+R+KCTLTS+GR VNV
Sbjct: 126 QFDLTGHSVFDFIHPCDQDELREMLVHRTGSKKSKEPNTGRSFFLRMKCTLTSRGRTVNV 185
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ D+ +S N ++ EP
Sbjct: 186 KSATWKVLHCSGHV--------------HVYDSHTEESTNGQK----------EP----- 216
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +P+PHP+N +VPL S+TFL++H++DMKFTY DE + + +G++P
Sbjct: 217 --------PIPYLVLICDPVPHPSNIEVPLDSKTFLSRHTMDMKFTYCDERITELMGYDP 268
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HAQDS H+ +N
Sbjct: 269 EDLLNRSVYEYYHAQDSDHLTKTHQN 294
>gi|194746128|ref|XP_001955536.1| GF18823 [Drosophila ananassae]
gi|190628573|gb|EDV44097.1| GF18823 [Drosophila ananassae]
Length = 1505
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 111/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRA--------QRSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A+ +D + R +F+RLKCTL
Sbjct: 199 KIDALGQQIWEYSHQCDHAEIKEALSLKRDIADKVKDEQRLESGVSTHHRDLFVRLKCTL 258
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR++N+K+A+YKVIH TGHLV N KD
Sbjct: 259 TSRGRSINIKSASYKVIHITGHLVVNA-------------------------------KD 287
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
+ +AIG PIPHP+N ++PL + TFLTKHSLDM+FTY D+
Sbjct: 288 E------------------RVLIAIGRPIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDK 329
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M LG++P + S+F H DS + FK+
Sbjct: 330 MHGLLGYSPSDLLDTSLFVCQHGADSERLMATFKS 364
>gi|46048879|ref|NP_990138.1| endothelial PAS domain-containing protein 1 [Gallus gallus]
gi|5051910|gb|AAD38358.1|AF129813_1 endothelial PAS domain protein 1 [Gallus gallus]
Length = 867
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGPGFGKKNKEMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNTCP----------------------------------PH 208
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K ++T C + + EPI HP+N D+PL S+TF+++HS+DMKFTY D+ + + +
Sbjct: 209 TLCGYKEPLLT----CLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITELI 264
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 265 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 296
>gi|325989311|gb|ADZ48669.1| hypoxia-inducible factor 1 alpha [Paralichthys olivaceus]
Length = 278
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 119/208 (57%), Gaps = 46/208 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ THPCD E++ +L + T++ +RS F+R+KCTLTS+GR VNV
Sbjct: 88 QFDLTGHSVFDFTHPCDQEELREMLIHRTGSKKTKESNTERSFFLRMKCTLTSRGRTVNV 147
Query: 58 KAATYKVIHCTGHLVQNQTPASNGST--LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
K+AT+KV+HC+GH V+ P + +T L EP
Sbjct: 148 KSATWKVLHCSGH-VRVYDPHTEQTTNGLKEP---------------------------- 178
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P V I +P+PHP+N +VPL ++TFL++H++DMKFTY DE + + +G+
Sbjct: 179 ----------PVPYLVLICDPVPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGY 228
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+P+ + +SV++++HA DS H+ N
Sbjct: 229 DPEDLLNRSVYEYYHALDSDHLTKTHHN 256
>gi|56785779|gb|AAW29027.1| hypoxia-inducible factor 1 alpha, partial [Epinephelus coioides]
Length = 699
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+Y+ HPCD E++ +L + T++ +RS F+R+KCTLTS+GR VNV
Sbjct: 93 QFDLTGHSVYDFIHPCDQEELREMLIHKIGSKKTKEPNTERSFFLRMKCTLTSRGRTVNV 152
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC GH+ +N ++T G EP
Sbjct: 153 KSATWKVLHCAGHI-----------------RVYDNHVEDTSNGH-------KEP----- 183
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 184 --------PVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 235
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
D + +SV++++HA DS H+ N
Sbjct: 236 DDLLNRSVYEYYHALDSDHLTKTHHN 261
>gi|54020803|ref|NP_001005647.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
gi|49250453|gb|AAH74648.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
Length = 862
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 117/211 (55%), Gaps = 45/211 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E+K LS +D + F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHDEIKENLSMKTGVGSGKKNKDANTEHDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+AT+KV+HCTGH ++ + P
Sbjct: 183 VNLKSATWKVLHCTGH---------------------------------VKAYNSYYPHS 209
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
G K V++ C + + +PI HP+N D+PL S+TFL++HS+DMKFTY D+ + + +G
Sbjct: 210 LCGYKEPVLS----CLIMMCQPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELIG 265
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
++P+ + +S ++F+HA DS + + +N C
Sbjct: 266 YHPEELLGRSAYEFYHALDSESMTKSHQNLC 296
>gi|395508094|ref|XP_003758350.1| PREDICTED: endothelial PAS domain-containing protein 1 [Sarcophilus
harrisii]
Length = 862
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 45/211 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGPGFGKKSKDVSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+AT+KV+HCTG ++ + P
Sbjct: 183 VNLKSATWKVLHCTGQ---------------------------------VKVYNSCAPHS 209
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
G K ++T C + + EPI HP+ D+PL S+TFL++HS+DMKFTY D+ + + +G
Sbjct: 210 LCGYKEPLLT----CLIIMCEPIQHPSTMDIPLDSKTFLSRHSMDMKFTYCDDRITELIG 265
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
++P+ + +S ++F+HA DS + + +N C
Sbjct: 266 YHPEELLGRSAYEFYHALDSESMTKSHQNLC 296
>gi|355565669|gb|EHH22098.1| hypothetical protein EGK_05296 [Macaca mulatta]
gi|355751289|gb|EHH55544.1| hypothetical protein EGM_04774 [Macaca fascicularis]
gi|384945768|gb|AFI36489.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
gi|384945770|gb|AFI36490.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|332227348|ref|XP_003262854.1| PREDICTED: endothelial PAS domain-containing protein 1 [Nomascus
leucogenys]
Length = 877
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 131 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 190
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 191 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 219
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 220 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 273
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 274 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 305
>gi|1695801|gb|AAC51212.1| MOP2 [Homo sapiens]
Length = 870
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|397504232|ref|XP_003822706.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pan
paniscus]
Length = 870
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|114577233|ref|XP_001147219.1| PREDICTED: endothelial PAS domain-containing protein 1 isoform 4
[Pan troglodytes]
gi|410265254|gb|JAA20593.1| endothelial PAS domain protein 1 [Pan troglodytes]
gi|410350683|gb|JAA41945.1| endothelial PAS domain protein 1 [Pan troglodytes]
Length = 870
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|1805268|gb|AAB41495.1| endothelial PAS domain protein 1 [Homo sapiens]
Length = 870
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|380810424|gb|AFE77087.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|40254439|ref|NP_001421.2| endothelial PAS domain-containing protein 1 [Homo sapiens]
gi|32470617|sp|Q99814.3|EPAS1_HUMAN RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP2; AltName: Full=Class E basic
helix-loop-helix protein 73; Short=bHLHe73; AltName:
Full=HIF-1-alpha-like factor; Short=HLF; AltName:
Full=Hypoxia-inducible factor 2-alpha;
Short=HIF-2-alpha; Short=HIF2-alpha; AltName:
Full=Member of PAS protein 2; AltName: Full=PAS
domain-containing protein 2
gi|30410995|gb|AAH51338.1| Endothelial PAS domain protein 1 [Homo sapiens]
gi|119620660|gb|EAX00255.1| endothelial PAS domain protein 1 [Homo sapiens]
gi|168277630|dbj|BAG10793.1| endothelial PAS domain-containing protein 1 [synthetic construct]
Length = 870
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|195037395|ref|XP_001990146.1| GH19178 [Drosophila grimshawi]
gi|193894342|gb|EDV93208.1| GH19178 [Drosophila grimshawi]
Length = 1566
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 107/213 (50%), Gaps = 61/213 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQ-----------RSVFIRLKCTLTS 50
K+D +GQ I++ H CDH+E+K L+ I+ + R +F+R+KCTLTS
Sbjct: 199 KIDTLGQQIWDYAHQCDHAEIKEALNLKRNVKIKDEQLLESGVSTYHRDLFVRMKCTLTS 258
Query: 51 KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
+GR++N+K+A+YKVIH TGHL N
Sbjct: 259 RGRSINIKSASYKVIHITGHLSVNSK---------------------------------- 284
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME 169
GE+ +AIG PIPHP+N ++PL + TFLTKH LDMKFTY D+ M
Sbjct: 285 ------GER---------VLIAIGRPIPHPSNIEIPLGTSTFLTKHGLDMKFTYVDDKMH 329
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
LG++P + S+F+ H DS + FK+
Sbjct: 330 SLLGYSPGDLLETSLFECQHGADSERLMATFKS 362
>gi|62822155|gb|AAY14704.1| unknown [Homo sapiens]
Length = 861
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 114 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 173
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 174 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 202
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 203 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 256
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 257 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 288
>gi|344291845|ref|XP_003417640.1| PREDICTED: endothelial PAS domain-containing protein 1 [Loxodonta
africana]
Length = 891
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 145 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 204
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 205 VNLKSATWKVLHCTGQMKVYNNCP---------PHSSL---------------------- 233
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 234 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 287
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 288 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 319
>gi|334312813|ref|XP_001382184.2| PREDICTED: endothelial PAS domain-containing protein 1 [Monodelphis
domestica]
Length = 1354
Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 45/211 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 615 QVELTGHSIFDFTHPCDHEEIRENLSLKSGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 674
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+AT+KV+HCTG ++ + P
Sbjct: 675 VNLKSATWKVLHCTGQ---------------------------------VKVYNSCAPHS 701
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
G K ++T C + + EPI HP+ D+PL S+TFL++HS+DMKFTY D+ + + +G
Sbjct: 702 LCGYKEPLLT----CLIVMCEPIQHPSTMDIPLDSKTFLSRHSMDMKFTYCDDRITELIG 757
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
++P+ + +S ++F+HA DS + + +N C
Sbjct: 758 YHPEELLGRSAYEFYHALDSESMTKSHQNLC 788
>gi|338714031|ref|XP_001498492.3| PREDICTED: endothelial PAS domain-containing protein 1 [Equus
caballus]
Length = 877
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 129 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 188
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 189 VNLKSATWKVLHCTGQVKVYNNCPPHNSL------------------------------- 217
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 218 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELV 271
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 272 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 303
>gi|338191512|gb|AEI84585.1| HIF-alpha [Cynoglossus semilaevis]
Length = 735
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 116/202 (57%), Gaps = 47/202 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ THPCD E++ +L + ++ +RS+F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFTHPCDQEELREMLIHRSGSKKNKEQNTERSLFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHL--VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
K+AT+KV+HC+GH+ N T +NG KD
Sbjct: 185 KSATWKVLHCSGHVRVYDNNTEQTNGH------------------------KD------- 213
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
P + I +PIPHP+N + PL ++TFL++H++DMKFTY DE + + +G+
Sbjct: 214 ---------PPVPYLILICDPIPHPSNIEAPLDTKTFLSRHTMDMKFTYCDERITELMGY 264
Query: 175 NPDIFIAKSVFDFHHAQDSFHI 196
+P+ + +SV++++HA DS H+
Sbjct: 265 DPEDLLNRSVYEYYHALDSDHL 286
>gi|297667706|ref|XP_002812111.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pongo
abelii]
Length = 869
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|296223954|ref|XP_002757844.1| PREDICTED: endothelial PAS domain-containing protein 1 [Callithrix
jacchus]
Length = 867
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|403269576|ref|XP_003926799.1| PREDICTED: endothelial PAS domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 867
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEDLLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|50261639|gb|AAT72404.1| hypoxia-inducible factor 1 alpha [Palaemonetes pugio]
Length = 1057
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 111/201 (55%), Gaps = 53/201 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+VD+MGQ +YE THPCDH E ++++SA + R F+RLKCTLT+KGR+VN+K+A+
Sbjct: 137 QVDVMGQCLYEYTHPCDHEEARALVSAKGPP--QEPRHAFLRLKCTLTAKGRSVNLKSAS 194
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKV+ +G LV+ + D+S
Sbjct: 195 YKVVRVSGELVKGE--------------------------------DES----------- 211
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
VA+G P+PHP+N + PL QTF++KHSLDMKFTY D+ + +F G +
Sbjct: 212 -------WLVALGTPVPHPSNIEFPLDKQTFVSKHSLDMKFTYVDDNVSEFCGHASSELL 264
Query: 181 AKSVFDFHHAQDSFHIQNAFK 201
+S+++ HHA DS I++A+K
Sbjct: 265 GRSLYEMHHALDSELIKDAYK 285
>gi|195451485|ref|XP_002072943.1| GK13872 [Drosophila willistoni]
gi|194169028|gb|EDW83929.1| GK13872 [Drosophila willistoni]
Length = 1563
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 108/216 (50%), Gaps = 64/216 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH---TEDIRAQ-----------RSVFIRLKCT 47
K+D +GQ I+E TH CDH+E+K L+ + I+ + R +F+R+KCT
Sbjct: 198 KIDALGQQIWEYTHQCDHAEIKEALNLKRNGIADKIKDEHLLESGITTHHRDLFVRMKCT 257
Query: 48 LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDK 107
LTS+GR++N+K+A+YKVIH TGHL N
Sbjct: 258 LTSRGRSINIKSASYKVIHITGHLTVNAK------------------------------- 286
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
GE+ VAIG PIPHP+N + PL + TFLTKHSLDMKFTY D+
Sbjct: 287 ---------GER---------LLVAIGRPIPHPSNIETPLGTSTFLTKHSLDMKFTYVDD 328
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M LG+ P+ + S+F H DS + FK+
Sbjct: 329 KMLGLLGYKPNDLLDTSLFGCQHGADSERLMATFKS 364
>gi|2895756|gb|AAC12871.1| hypoxia-inducible factor 1 alpha related factor [Mus musculus]
Length = 874
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGSKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|170035204|ref|XP_001845461.1| hypoxia-inducible factor [Culex quinquefasciatus]
gi|167877013|gb|EDS40396.1| hypoxia-inducible factor [Culex quinquefasciatus]
Length = 376
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 110/215 (51%), Gaps = 63/215 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------TEDIRAQ--RSVFIRLKCTL 48
++D+MGQ I++ +H CDH E++ L+ H D + Q R F+RLKCTL
Sbjct: 135 QIDMMGQPIWDYSHQCDHEELREALNGRHHSPSELVKGVANSDCKPQETRDFFLRLKCTL 194
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR+VN+K+A+YKVIH TGH I + D R+
Sbjct: 195 TSRGRSVNIKSASYKVIHVTGH--------------------IACKEDGQRQ-------- 226
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
VA+ P+PHP+N +VPL + TFL+KHSLDMKF+Y D+
Sbjct: 227 ---------------------LVAVARPLPHPSNIEVPLDASTFLSKHSLDMKFSYVDDK 265
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M LG+NP + K +++ HH DS H+ FKN
Sbjct: 266 MFALLGYNPADLMGKPLYECHHGIDSEHLMGTFKN 300
>gi|390407703|ref|NP_001254578.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
gi|126697524|gb|ABO26719.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
Length = 756
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 118/206 (57%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL GQS+++ HPCD E++ +L + ++ +RS F+R+KCTLT++GR VNV
Sbjct: 125 QFDLTGQSVFDFIHPCDQEELREMLVHKTGSKKAKEADTKRSFFLRMKCTLTNRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH + DN ++ N + EP
Sbjct: 185 KSATWKVLHCSGH--------------VRVHDNPTEETSNGHK----------EP----- 215
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P+ V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 216 --------PAPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HA DS H+ N
Sbjct: 268 EDLLDRSVYEYYHALDSDHLNKTHHN 293
>gi|34785558|gb|AAH57870.1| Endothelial PAS domain protein 1 [Mus musculus]
gi|74153020|dbj|BAE34506.1| unnamed protein product [Mus musculus]
gi|148706668|gb|EDL38615.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 874
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGSKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|444705900|gb|ELW47278.1| Endothelial PAS domain-containing protein 1 [Tupaia chinensis]
Length = 833
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 122/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 67 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRT 126
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 127 VNLKSATWKVLHCTGQVKVYNDCP---------PHSSL---------------------- 155
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 156 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 209
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS + + +N C
Sbjct: 210 GYHPEELLGRSAYEFYHALDSESMTKSHQNLC 241
>gi|431912714|gb|ELK14732.1| Endothelial PAS domain-containing protein 1 [Pteropus alecto]
Length = 884
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 137 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 196
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 197 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 225
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 226 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELV 279
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 280 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 311
>gi|120419452|gb|ABM21545.1| endothelial PAS domain protein 1 [Bos taurus]
Length = 462
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 124 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 183
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 184 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 212
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 213 --CGCKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELV 266
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 267 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 298
>gi|178057356|ref|NP_034267.3| endothelial PAS domain-containing protein 1 [Mus musculus]
gi|3914285|sp|P97481.2|EPAS1_MOUSE RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=HIF-1-alpha-like factor;
Short=HLF; Short=mHLF; AltName: Full=HIF-related factor;
Short=HRF; AltName: Full=Hypoxia-inducible factor
2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
Length = 874
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGSKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|2117020|dbj|BAA20130.1| mHLF [Mus musculus]
Length = 874
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGSKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|148228022|ref|NP_001090889.1| endothelial PAS domain-containing protein 1 [Sus scrofa]
gi|125634700|gb|ABN48508.1| hypoxia-inducible factor 2 alpha [Sus scrofa]
Length = 871
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGCKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|301753236|ref|XP_002912483.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Ailuropoda melanoleuca]
Length = 1022
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 121/213 (56%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 277 QVELTGHSIFDFTHPCDHEEIRENLSLKTGSGFGKKSKDLSTERDFFMRMKCTVTNRGRT 336
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNG-STLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+AT+KV+HCTG + V N P +G + EP +
Sbjct: 337 VNLKSATWKVLHCTGQVKVYNNCPPHSGLCSYKEPLLS---------------------- 374
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + +
Sbjct: 375 ----------------CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITEL 418
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 419 VGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 451
>gi|27807411|ref|NP_777150.1| endothelial PAS domain-containing protein 1 [Bos taurus]
gi|5019614|dbj|BAA78676.1| endothelial PAS domain protein 1/hypoxia-inducible factor-2 alpha
[Bos taurus]
Length = 870
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGCKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELV 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|443732750|gb|ELU17358.1| hypothetical protein CAPTEDRAFT_72408, partial [Capitella teleta]
Length = 370
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 47/210 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRA---------QRSVFIRLKCTLTSKG 52
++DL+G SI++ +HPCDH E+ +L + + +R F+R+KCTLTSKG
Sbjct: 117 QLDLIGHSIFDFSHPCDHDELHELLQEKGSSSSKEPKKKSSSCHERDFFVRMKCTLTSKG 176
Query: 53 RNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
++VN+K+ATYKV+HC+GH V P + S L+ QD+ S
Sbjct: 177 KSVNLKSATYKVMHCSGHYV---NPDNASSELLGLQDDPSLSS----------------- 216
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
+ I EPIPHPAN +VPL S+TFL++HSL+MKFTY D+ ++D
Sbjct: 217 -----------------IMVIAEPIPHPANIEVPLDSRTFLSRHSLNMKFTYCDDRVDDL 259
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
L ++ + +S++++ HA D+ ++ AFK
Sbjct: 260 LHYSGSELVGRSMYEYQHALDTDNLDKAFK 289
>gi|440906166|gb|ELR56466.1| Endothelial PAS domain-containing protein 1 [Bos grunniens mutus]
Length = 873
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 126 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 185
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 186 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 214
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 215 --CGCKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELV 268
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 269 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 300
>gi|291386847|ref|XP_002709777.1| PREDICTED: endothelial PAS domain protein 1 [Oryctolagus cuniculus]
Length = 1006
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ ++D+ +R F+R+KCT+T++GR
Sbjct: 263 QVELTGHSIFDFTHPCDHEEIRENLTLKSGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 322
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 323 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 351
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 352 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 405
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS + + +N C
Sbjct: 406 GYHPEELLGRSAYEFYHALDSESMTKSHQNLC 437
>gi|281352631|gb|EFB28215.1| hypothetical protein PANDA_000205 [Ailuropoda melanoleuca]
Length = 860
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 121/213 (56%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 115 QVELTGHSIFDFTHPCDHEEIRENLSLKTGSGFGKKSKDLSTERDFFMRMKCTVTNRGRT 174
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNG-STLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+AT+KV+HCTG + V N P +G + EP +
Sbjct: 175 VNLKSATWKVLHCTGQVKVYNNCPPHSGLCSYKEPLLS---------------------- 212
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + +
Sbjct: 213 ----------------CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITEL 256
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 257 VGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 289
>gi|148227427|ref|NP_001085718.1| endothelial PAS domain protein 1 [Xenopus laevis]
gi|49118238|gb|AAH73244.1| MGC80589 protein [Xenopus laevis]
Length = 862
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 45/211 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS D + F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHDEIRENLSMKTGVGSGKKNRDANTEHDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+AT+KV+HCTGH ++ + P
Sbjct: 183 VNLKSATWKVLHCTGH---------------------------------VKAYNSYHPHS 209
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
G K +++ C + + +PI HP+N D+PL S+TFL++HS+DMKFTY D+ + + +G
Sbjct: 210 LCGFKEPILS----CLIMMCQPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRIIELIG 265
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 YHPEELLGRSAYEFYHALDSENMTKSHQNLC 296
>gi|417405041|gb|JAA49246.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 870
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 120/211 (56%), Gaps = 44/211 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSIKDGSGFGKKSKDLSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+AT+KV+HCTG Q + N + P
Sbjct: 183 VNLKSATWKVLHCTG------------------QVKVYNHC--------------APPSG 210
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G
Sbjct: 211 LCGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELVG 266
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
++P+ + +S ++F+HA DS + + +N C
Sbjct: 267 YHPEELLGRSAYEFYHALDSESMTKSHQNLC 297
>gi|148745435|gb|AAI42230.1| Endothelial PAS domain protein 1 [Bos taurus]
gi|296482559|tpg|DAA24674.1| TPA: endothelial PAS domain protein 1 [Bos taurus]
Length = 870
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 122/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGCKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELV 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPQELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|354503088|ref|XP_003513613.1| PREDICTED: endothelial PAS domain-containing protein 1 [Cricetulus
griseus]
gi|344258028|gb|EGW14132.1| Endothelial PAS domain-containing protein 1 [Cricetulus griseus]
Length = 878
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ +D+ +R F+R+KCT+T++GR
Sbjct: 127 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKNKDMSTERDFFMRMKCTVTNRGRT 186
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P N
Sbjct: 187 VNLKSATWKVLHCTGQVRVYNNCPPHNSL------------------------------- 215
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 216 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRIMELI 269
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS + + +N C
Sbjct: 270 GYHPEELLGRSAYEFYHALDSESMTKSHQNLC 301
>gi|73970126|ref|XP_531807.2| PREDICTED: endothelial PAS domain-containing protein 1 [Canis lupus
familiaris]
Length = 975
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 229 QVELTGHSIFDFTHPCDHEEIRENLSLKSGPGFGKKSKDMSTERDFFMRMKCTVTNRGRT 288
Query: 55 VNVKAATYKVIHCTGH--LVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+AT+KV+HCTG + N P S+ + EP +
Sbjct: 289 VNLKSATWKVLHCTGQVKVYNNCPPHSSLCSYKEPLLS---------------------- 326
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + +
Sbjct: 327 ----------------CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITEL 370
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 371 VGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 403
>gi|149050487|gb|EDM02660.1| endothelial PAS domain protein 1 [Rattus norvegicus]
Length = 873
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ +D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKTGSGFGKKNKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELV 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|19716307|gb|AAL95711.1|AF402782_1 hypoxia-inducible factor 2 alpha [Fundulus heteroclitus]
Length = 873
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 117/212 (55%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-------EDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +D+ +R F+R+KCT+T++GR
Sbjct: 128 QVELTGHSIFDFTHPCDHEEIRENLSLKSAGSFRKKGKDVSTERDFFMRMKCTVTNRGRT 187
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTGHL + + P+ EP
Sbjct: 188 VNLKSASWKVLHCTGHLKMYDGCPSRVLCGYKEP-------------------------- 221
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C V + EPI HP+N + PL S+TFL++H++DMKFTY D+ + + +
Sbjct: 222 ------------PLTCAVLMCEPIQHPSNIEAPLDSRTFLSRHNMDMKFTYCDDKVTELI 269
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S+++F+HA DS + + N C
Sbjct: 270 GYSPEDLMGRSIYEFYHALDSDSVTKSHHNLC 301
>gi|355686181|gb|AER97972.1| endothelial PAS domain protein 1 [Mustela putorius furo]
Length = 859
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D +R F+R+KCT+TS+GR
Sbjct: 114 QVELTGHSIFDFTHPCDHEEIRENLSLKSGSGFGKKSKDTSTERDFFMRMKCTVTSRGRT 173
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNG-STLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+AT+KV+HCTG + V + P G + EP +
Sbjct: 174 VNLKSATWKVLHCTGQVKVYSSCPPHGGLCSYKEPLLS---------------------- 211
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + +
Sbjct: 212 ----------------CLILMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITEL 255
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 256 VGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 288
>gi|410954769|ref|XP_003984034.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1 [Felis catus]
Length = 907
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 120/213 (56%), Gaps = 48/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +D+ +R F+R+KCT+T++GR
Sbjct: 163 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKGKDMSTERDFFMRMKCTVTNRGRT 222
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPA-SNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+AT+KV+HCTG + V N P S+ + EP +
Sbjct: 223 VNLKSATWKVLHCTGQVKVYNSCPPHSSLCSFKEPLLS---------------------- 260
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + +
Sbjct: 261 ----------------CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITEL 304
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 305 IGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 337
>gi|326672423|ref|XP_695262.5| PREDICTED: endothelial PAS domain-containing protein 1 [Danio
rerio]
Length = 810
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +++ R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSIKSGPVYGRKGKEMSTSRDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTGHL V + P EP
Sbjct: 183 VNLKSASWKVLHCTGHLQVCSSRPPQILCGFSEP-------------------------- 216
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C + PIPHP+N D PL S+TF+++HS+DMKF Y DE + +
Sbjct: 217 ------------PLTCITMLCAPIPHPSNVDTPLDSKTFMSRHSMDMKFIYCDERVSSLI 264
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G+ P+ + +SV++F HA DS ++ + +N C
Sbjct: 265 GYRPEELLGRSVYEFCHALDSENMTKSHQNLC 296
>gi|326673039|ref|XP_001337610.2| PREDICTED: hypoxia-inducible factor 1-alpha [Danio rerio]
Length = 730
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 44/201 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L G S++E THPCDH E++ +L+ + ++D RS +R+KCTLTS+GR VN
Sbjct: 203 QIELTGHSVFEFTHPCDHEELREMLAHRFGLSKKSKDQNTNRSFLLRMKCTLTSRGRTVN 262
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
VK+A++KV+ C+G + + +D E+EV
Sbjct: 263 VKSASWKVLRCSGRI---------------------HTADGV--------------EKEV 287
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
E++ S V I E IPHPAN + PL S+TFL++H+LDM+FTY DE + + LGF+
Sbjct: 288 CEEKNTC---STYLVLICESIPHPANIEAPLDSRTFLSRHTLDMRFTYCDERITELLGFD 344
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + SV++++HA DS H+
Sbjct: 345 PEDVLQHSVYEYYHALDSDHM 365
>gi|407316776|gb|AFU07570.1| hypoxia-inducible factor 3 alpha subunit [Polypterus senegalus]
Length = 627
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 47/209 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH---------TEDIRAQRSVFIRLKCTLTSKG 52
+++L+GQSI++ HPCD E++ IL++ H +DI+ +R+ F+R+K TLTS G
Sbjct: 110 QLELVGQSIFDFVHPCDQEELRDILTSRHGYSKKKNSQNQDIQTERNFFLRMKSTLTSNG 169
Query: 53 RNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
R VN+K+AT+KV+ C+GHL T + D+T+ G
Sbjct: 170 RTVNLKSATWKVLQCSGHLRTYHT-----------------EEDSTKEG----------- 201
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
P C I EP+P P+ D PL S+TF ++H++D+K+T+ ++ + +
Sbjct: 202 ---------FTQIPLTCLTLICEPVPQPSTIDFPLDSRTFQSRHTMDLKYTHCEDRVFEL 252
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
LG+ P+ I +S +++HHA DS HI +F
Sbjct: 253 LGYQPEDLIGRSAYEYHHALDSDHITKSF 281
>gi|351715378|gb|EHB18297.1| Endothelial PAS domain-containing protein 1, partial
[Heterocephalus glaber]
Length = 862
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 122/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ +++ +R F+R+KCT+T++GR
Sbjct: 115 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKVKEMSTERDFFMRMKCTVTNRGRT 174
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 175 VNLKSATWKVLHCTGQVKVYNSCP---------PHSSL---------------------- 203
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 204 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 257
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 258 GYHPEDLLGRSAYEFYHALDSENMTKSHQNLC 289
>gi|296240117|gb|ADH01740.1| hypoxia-inducible factor 1 alpha [Oratosquilla oratoria]
Length = 1050
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 52/201 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+V++MGQ + + THPCDH E + +LS + D R F+RLKCTL +KGRNVN+K+AT
Sbjct: 140 QVEMMGQLLTDYTHPCDHEEARELLSLKCSTD---HRFAFLRLKCTLAAKGRNVNLKSAT 196
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKV+ +G +V S+G DS
Sbjct: 197 YKVVQVSGEIVH-----SDGGV-------------------------DS----------- 215
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
FVA+ P+P+PAN + PL QTF+++HSLDMKFTY D+++ +FLG+ P+ +
Sbjct: 216 -------WFVALASPVPNPANVEFPLDKQTFVSRHSLDMKFTYVDDSICEFLGYGPEELV 268
Query: 181 AKSVFDFHHAQDSFHIQNAFK 201
+S + HHA D+ ++ +FK
Sbjct: 269 GQSAYALHHALDAQIVKESFK 289
>gi|147904360|ref|NP_001085564.1| MGC80468 protein [Xenopus laevis]
gi|49115150|gb|AAH72936.1| MGC80468 protein [Xenopus laevis]
Length = 859
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 45/211 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++ + F+R+KCT+T++GR
Sbjct: 123 QVELTGLSIFDFTHPCDHDEIRENLSMKTGLGSGKKNKEANTEHDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+AT+KV+HCTGH ++ + P
Sbjct: 183 VNLKSATWKVLHCTGH---------------------------------VKAYNSYHPHS 209
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
G K +++ C + + +PI HP+N D+PL S+TFL++HS+DMKF+Y D+ + + +G
Sbjct: 210 LCGYKEPILS----CLIMMCQPIQHPSNIDIPLDSKTFLSRHSMDMKFSYCDDRITELIG 265
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
++P+ + +S ++F+HA DS + + +N C
Sbjct: 266 YHPEELLGRSAYEFYHALDSESMTKSHQNLC 296
>gi|12831205|ref|NP_075578.1| endothelial PAS domain-containing protein 1 [Rattus norvegicus]
gi|32469610|sp|Q9JHS1.1|EPAS1_RAT RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Hypoxia-inducible factor
2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
gi|8953577|emb|CAB96612.1| hypoxia inducible factor 2 alpha [Rattus norvegicus]
Length = 874
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 121/212 (57%), Gaps = 46/212 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ +D +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKTGSGFGKKNKDRSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+AT+KV+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP---------PHSSL---------------------- 211
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +
Sbjct: 212 --CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELV 265
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC 297
>gi|126697522|gb|ABO26718.1| hypoxia-inducible factor 1 alpha [Sander lucioperca]
Length = 749
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L T++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFIHPCDQDELREMLVYKTGPKKTKESNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ ++ ++ T G EP
Sbjct: 185 KSATWKVLHCSGHV-----------------RVYDSHTEETPNGH-------KEP----- 215
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 216 --------PVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HA DS H+ N
Sbjct: 268 EDLLNRSVYEYYHALDSDHLTKTHHN 293
>gi|288887156|gb|ADC55886.1| hypoxia inducible factor-1alpha [Champsocephalus gunnari]
Length = 666
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + T + RS F+R+KCTLTS+GR VNV
Sbjct: 124 QFDLTGYSVFDFIHPCDQEELREMLVHKTGSKKTREPNTARSFFLRMKCTLTSRGRTVNV 183
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+A +KV+HC+GH+ D ++ N + EP
Sbjct: 184 KSAAWKVLHCSGHV--------------RVYDGCTEETPNGHK----------EP----- 214
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 215 --------PVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 266
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV+D++HA DS H+ N
Sbjct: 267 EDLLNRSVYDYYHAMDSDHLTKTHHN 292
>gi|288887162|gb|ADC55889.1| hypoxia inducible factor-1alpha [Gobionotothen gibberifrons]
Length = 519
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 114/200 (57%), Gaps = 42/200 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + T++ RS F+R+KCTLTS+GR VNV
Sbjct: 94 QFDLTGYSVFDFIHPCDQEELREMLVHKTGSKKTKEPNTARSFFLRMKCTLTSRGRTVNV 153
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+A +KV+HC+GH+ +G T P ++ EP
Sbjct: 154 KSAAWKVLHCSGHV-----RVYDGCTEETPNEH-------------------KEP----- 184
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 185 --------PVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 236
Query: 177 DIFIAKSVFDFHHAQDSFHI 196
D + +SV++++HA DS H+
Sbjct: 237 DNLLNRSVYEYYHAMDSDHL 256
>gi|288887160|gb|ADC55888.1| hypoxia inducible factor-1alpha [Chaenocephalus aceratus]
Length = 530
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + T++ RS F+R+KCTLTS+GR VNV
Sbjct: 76 QFDLTGYSVFDFIHPCDQEELREMLVHKTGSKKTKEPNTARSFFLRMKCTLTSRGRTVNV 135
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+A +KV+HC+GH+ D ++ N + EP
Sbjct: 136 KSAAWKVLHCSGHV--------------RVYDGCTEETPNGHK----------EP----- 166
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 167 --------PVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 218
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV+D++HA DS H+ N
Sbjct: 219 EDLLNRSVYDYYHAMDSDHLTKTHHN 244
>gi|1805270|gb|AAB41496.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 875
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 123/213 (57%), Gaps = 47/213 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYK-VIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+AT+K V+HCTG + V N P P ++
Sbjct: 183 VNLKSATWKSVLHCTGQVRVYNNCP---------PHSSL--------------------- 212
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
G K +++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + +
Sbjct: 213 ---CGSKEPLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILEL 265
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 266 IGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 298
>gi|432904408|ref|XP_004077316.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1-like [Oryzias latipes]
Length = 862
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 112/213 (52%), Gaps = 52/213 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT--------EDIRAQRSVFIRLKCTLTSKGR 53
+V+L G SI++ THPCDH E+K LS T +++ +R F+R+KCT+T++GR
Sbjct: 128 QVELTGHSIFDFTHPCDHDEIKENLSLKTTGSGFGKKGKELSTERDFFMRMKCTVTNRGR 187
Query: 54 NVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
VN+K+A +KV+HCTGHL + + P+ EP
Sbjct: 188 TVNLKSAGWKVLHCTGHLKMYDGCPSRVLCGYKEP------------------------- 222
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDF 171
P C V + EPIPHP+N D PL S+TFL++HS+DMKFTY D+ +
Sbjct: 223 -------------PLTCAVLMCEPIPHPSNIDTPLDSRTFLSRHSMDMKFTYCDDKXAE- 268
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
NP +SV+DF+HA DS + + N C
Sbjct: 269 ---NPQSIXGRSVYDFYHALDSDSVTKSHHNLC 298
>gi|390350866|ref|XP_783102.3| PREDICTED: endothelial PAS domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 933
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 106/211 (50%), Gaps = 49/211 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDI---------RAQRSVFIRLKCTLTSKG 52
+VDLMGQSIY+ HPCDH E++ LS + R +R+KCTLT KG
Sbjct: 130 QVDLMGQSIYDYAHPCDHDEIREQLSDRPGLTLTTLPSATSKRKHHGFLMRVKCTLTPKG 189
Query: 53 RNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
+ VN+KAA+YK +HC GH+ SD + G +
Sbjct: 190 KIVNLKAASYKAVHCQGHMKLAL-------------------SDTSVLGYRM-------- 222
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDF 171
P+ C V I PIPHP+N +VPL FLT+HS+DMKFTY DE +E
Sbjct: 223 ------------PPTPCLVLIASPIPHPSNIEVPLDCSAFLTRHSMDMKFTYCDERIEQL 270
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+G+ P+ + +S + ++HA D I ++K+
Sbjct: 271 MGYIPNELVGQSFYVYYHALDGQLIDKSYKD 301
>gi|380039560|gb|AFD32324.1| hypoxia-inducible factor 2 alpha B, partial [Aspius aspius]
Length = 472
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 47/212 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +D+ R F+R+KCT+T++GR
Sbjct: 67 QVELTGHSIFDFTHPCDHEEIRENLSVKSGPVYGRRGKDMSTGRDFFMRMKCTVTNRGRT 126
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A++KV+HCTGHL V + P EP
Sbjct: 127 VNLKSASWKVLHCTGHLQVCSSRPPQVLCGFSEP-------------------------- 160
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C + PIPHP+ D PL S+TF+++HS+DMKF Y DE + +
Sbjct: 161 ------------PLTCVTLLCAPIPHPSTIDTPLDSKTFMSRHSMDMKFIYCDERISSLI 208
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
G+ P+ + +S+++F HA DS + + +N C
Sbjct: 209 GYRPEELLGRSMYEFCHALDSESMTKSHQNLC 240
>gi|288887158|gb|ADC55887.1| hypoxia inducible factor-1alpha [Notothenia coriiceps]
Length = 658
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + T++ RS F+R+KCTLTS+GR VNV
Sbjct: 124 QFDLTGYSVFDFIHPCDQEELREMLVHKTGSKKTKEPNTARSFFLRMKCTLTSRGRTVNV 183
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+A +KV+HC+GH+ +G T EE
Sbjct: 184 KSAAWKVLHCSGHVR-----VYDGCT------------------------------EETP 208
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
+ T P V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 209 NGHKEPTVPY--LVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 266
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
D + +SV++++HA DS H+ N
Sbjct: 267 DDLLNRSVYEYYHAMDSDHLTKTHHN 292
>gi|71911731|gb|AAZ52828.1| hypoxia inducible factor 1 alpha [Pachycara brachycephalum]
Length = 747
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 46/207 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + ++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLCGHSVFDYIHPCDQEELREMLVHKTGSKKAKEPNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC+GH+ V + NG EP
Sbjct: 185 KSATWKVLHCSGHVRVYDTEETPNGH---------------------------QEP---- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V + +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++
Sbjct: 214 ---------PVPYLVLVCDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYD 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
P+ + +SV++++HA DS H+ N
Sbjct: 265 PEDLLNRSVYEYYHALDSDHLTKTHHN 291
>gi|407316790|gb|AFU07577.1| hypoxia-inducible factor 2 alpha subunit, partial [Protopterus
annectens]
Length = 727
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 43/209 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E+K L ++ ++R F+R+KCT+TS+GR VN
Sbjct: 120 QVELTGHSIFDFTHPCDHEEIKENLCLKNGYGKKNREMNSERDFFMRMKCTVTSRGRTVN 179
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH IQ +
Sbjct: 180 LKSATWKVLHCTGH---------------------------------IQTHGSCQQHTLC 206
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K ++ + + PI HP+N D+PL S+TFL++HS+DMKFTY D+ + + +G++
Sbjct: 207 GFKDPLLA----YLIIVCAPIQHPSNIDIPLDSKTFLSRHSMDMKFTYCDDRITELMGYH 262
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+ + +SV++F+HA DS ++ +N C
Sbjct: 263 SEELLGRSVYEFYHALDSENMTKTHQNLC 291
>gi|410898074|ref|XP_003962523.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Takifugu
rubripes]
Length = 755
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 46/208 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + ++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFIHPCDQEELREMLIHRTGSKKAKEPNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGH--LVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
K+AT+KV+HC+G + +N T EP S + ++ SA+
Sbjct: 185 KSATWKVLHCSGQVRVYENHT---------EP-------SPDEQKESAVP---------- 218
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
V I +PIPHPAN + PL ++TFL++H++DMKFT DE + + +G+
Sbjct: 219 -------------YLVLICDPIPHPANIEFPLDTKTFLSRHTMDMKFTDCDERITELMGY 265
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
P+ + +SV++++HAQDS H+ N
Sbjct: 266 EPEDLLNRSVYEYYHAQDSDHLAKTHHN 293
>gi|71911739|gb|AAZ52832.1| hypoxia inducible factor 1 alpha [Zoarces viviparus]
Length = 747
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 46/207 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + ++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLCGHSVFDYIHPCDTEELREMLVHKTGSKKAKEPNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC+GH+ V + NG EP
Sbjct: 185 KSATWKVLHCSGHVRVYDTEETPNGH---------------------------QEP---- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
P V + +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++
Sbjct: 214 ---------PVPYLVLVCDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYD 264
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFKN 202
P+ + +SV++++HA DS H+ N
Sbjct: 265 PEDLLNRSVYEYYHALDSDHLTKTHHN 291
>gi|126697518|gb|ABO26716.1| hypoxia-inducible factor 1 alpha [Gymnocephalus cernuus]
Length = 748
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 115/206 (55%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L ++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFIHPCDQDELREMLVYKTGPKKAKESNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ ++ ++ T G EP
Sbjct: 185 KSATWKVLHCSGHV-----------------RVYDSHTEETPNGH-------KEP----- 215
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 216 --------PFPYLVLICDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HA DS H+ N
Sbjct: 268 EDLLNRSVYEYYHALDSDHLTKTHHN 293
>gi|260837027|ref|XP_002613507.1| hypothetical protein BRAFLDRAFT_208408 [Branchiostoma floridae]
gi|229298892|gb|EEN69516.1| hypothetical protein BRAFLDRAFT_208408 [Branchiostoma floridae]
Length = 336
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 39/172 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+++L G SI++ THPCDH E++ +L + S F+R+KCTLTSKGRNVN+K+AT
Sbjct: 126 QLELTGHSIFDFTHPCDHEEIRDVLCTKNGYTKNKACSFFMRMKCTLTSKGRNVNLKSAT 185
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
YKVIHC G+L N EP
Sbjct: 186 YKVIHCQGYLRSYNNSQVNSLGCKEP---------------------------------- 211
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
P C VAIGEPIPHP+N + PL +TFL++HS+DMKFTY DE+++ ++
Sbjct: 212 ----PLLCLVAIGEPIPHPSNIEFPLDCKTFLSRHSMDMKFTYCDESVKIYM 259
>gi|380039558|gb|AFD32323.1| hypoxia-inducible factor 1 alpha A, partial [Aspius aspius]
Length = 545
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 54/204 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
++DL G +++E THPCDH E++ +L+ ++ RS +R+KCTLTS+GR VN
Sbjct: 34 QIDLTGHTVFEFTHPCDHEELREMLAHRNGLCKKAKEFHTNRSFLLRMKCTLTSRGRTVN 93
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
VK+A++KV+ C+GH+ +T G
Sbjct: 94 VKSASWKVLRCSGHI-------------------------HTADG--------------- 113
Query: 117 GEKRRVVTEPSHC---FVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
VV E + C V I E IPHPAN + PL S+TFL++H+L M+FTY DE + L
Sbjct: 114 -----VVKEKNACSTYLVLICESIPHPANIEAPLDSRTFLSRHTLHMRFTYCDERITKLL 168
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHI 196
GF+P + SV++++HA DS H+
Sbjct: 169 GFDPVDLLQHSVYEYYHALDSGHM 192
>gi|288887164|gb|ADC55890.1| hypoxia inducible factor-1alpha [Pseudochaenichthys georgianus]
Length = 686
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 112/206 (54%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L + ++ RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGYSVFDFIHPCDQEELREMLVHKTGSKKNKEPNTARSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+A +KV+HC+GH+ +G T P + EP
Sbjct: 185 KSAAWKVLHCSGHVR-----VYDGCTEETPNGH-------------------KEP----- 215
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V +PI HP+N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 216 --------PVPYLVLXCDPIQHPSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV+D++HA DS H+ N
Sbjct: 268 EDLLNRSVYDYYHAMDSDHLTKTHHN 293
>gi|126697520|gb|ABO26717.1| hypoxia-inducible factor 1 alpha [Perca fluviatilis]
Length = 749
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 114/206 (55%), Gaps = 42/206 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ HPCD E++ +L ++ +RS F+R+KCTLTS+GR VNV
Sbjct: 125 QFDLTGHSVFDFIHPCDQDELREMLVYKTGPKKAKESNTERSFFLRMKCTLTSRGRTVNV 184
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH+ ++ ++ T G EP
Sbjct: 185 KSATWKVLHCSGHV-----------------RVYDSHTEETPNGH-------KEP----- 215
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
P V I +PI H +N +VPL ++TFL++H++DMKFTY DE + + +G++P
Sbjct: 216 --------PVPYLVLICDPIQHLSNIEVPLDTKTFLSRHTMDMKFTYCDERITELMGYDP 267
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +SV++++HA DS H+ N
Sbjct: 268 EDLLNRSVYEYYHALDSDHLTKTHHN 293
>gi|407316792|gb|AFU07578.1| hypoxia-inducible factor 3 alpha subunit, partial [Lepisosteus
platostomus]
Length = 483
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 40/198 (20%)
Query: 10 IYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYK 63
+++ HPCD E++ L S +D+ +RS FIR+K TLTS+GR VN+K+A+YK
Sbjct: 3 VFDFVHPCDQEELRDALTPRAGFSKKQNQDVPTERSFFIRMKSTLTSRGRTVNIKSASYK 62
Query: 64 VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVV 123
V+HCTGH+ +T + S Q+ P +
Sbjct: 63 VLHCTGHI-------------------------HTYKSSGAQEPPADCPA--------LP 89
Query: 124 TEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+P + EPIPHP+N + PL S TFL++HSLD+KFT+ D + + +G+ P+ I +
Sbjct: 90 PQPLTFLTLLCEPIPHPSNVEFPLGSSTFLSRHSLDLKFTHCDGRVTELVGYKPEDLIGR 149
Query: 183 SVFDFHHAQDSFHIQNAF 200
S +++HHA DS H+ +
Sbjct: 150 SAYEYHHALDSDHLTKSL 167
>gi|402906004|ref|XP_003915797.1| PREDICTED: hypoxia-inducible factor 3-alpha [Papio anubis]
Length = 632
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|332257101|ref|XP_003277654.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Nomascus
leucogenys]
Length = 600
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA ++ DSEP
Sbjct: 112 LKAATWKVLHCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|332257105|ref|XP_003277656.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 5 [Nomascus
leucogenys]
Length = 621
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 70 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 129
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA ++ DSEP
Sbjct: 130 LKAATWKVLHCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 163
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 164 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 214
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 215 PDDLIGCSAYEYIHALDS 232
>gi|348537940|ref|XP_003456450.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 677
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 113/204 (55%), Gaps = 48/204 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR----AQRSVFIRLKCTLTSKGRNVNV 57
+++L+GQSIY+ HPCD E++ +L+ ++ R ++R+ F+R+K TLT++GR VN+
Sbjct: 136 QLELLGQSIYDFVHPCDQEELRDLLTPRLSKKSRTEQTSERNFFVRMKSTLTTRGRTVNI 195
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HCTG + P +GS S P
Sbjct: 196 KSATWKVLHCTGQI----RPFGSGSA--------------------------SPP----- 220
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNP 176
RV+T + EPIPHP++ + PL TFLT+HS+D++FT+ + + + +G+ P
Sbjct: 221 -AGRVMT-------LLCEPIPHPSSVEFPLDTCTFLTRHSMDLRFTHCEGRVAELVGYKP 272
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAF 200
D I +S F+F HA DS HI +
Sbjct: 273 DDLIGRSGFEFLHALDSDHINKSL 296
>gi|47210062|emb|CAF96125.1| unnamed protein product [Tetraodon nigroviridis]
Length = 410
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 52/209 (24%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILS------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
++++L+GQSIY+ HPCD E+ +L+ +++ + + F+R+K TLT++GR
Sbjct: 124 VQLELLGQSIYDFVHPCDQEELTDLLAPRPGLNKKQVKEMPSDINFFLRMKSTLTARGRT 183
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+A +KV+HCTGH M P D
Sbjct: 184 VNIKSAEWKVLHCTGH--------------MCPFD------------------------A 205
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
EV RV+ V + EPIPHP++ + PL + TFLT+HS+D++FT+ + + + +G
Sbjct: 206 EVSSAARVM-------VLLCEPIPHPSSVEFPLDTYTFLTRHSMDLRFTHCEGRVTELVG 258
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ PD I +S F+FHHA DS HI + +
Sbjct: 259 YKPDDLIGRSAFEFHHALDSDHISRSLRT 287
>gi|332257103|ref|XP_003277655.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Nomascus
leucogenys]
Length = 459
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA ++ DSEP
Sbjct: 112 LKAATWKVLHCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|47230124|emb|CAG10538.1| unnamed protein product [Tetraodon nigroviridis]
Length = 854
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 61/219 (27%)
Query: 8 QSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYK 63
+S+++ HPCD E++ +L + ++ +R F+R+KCTLTS+GR VNVK+AT+K
Sbjct: 594 RSVFDFIHPCDQEELREMLIHRTGSKKAKEPNTERRFFLRMKCTLTSRGRTVNVKSATWK 653
Query: 64 VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVV 123
V+HC+GH+ +++PA EP D D ++P
Sbjct: 654 VLHCSGHVRVHESPA-------EP------------------DPDGAQP----------- 677
Query: 124 TEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE---------------- 166
V I +PIPHPAN + PL ++TFL++H++DMKFTY DE
Sbjct: 678 -SAVPYLVLICDPIPHPANIEFPLDTKTFLSRHTMDMKFTYCDERQVIPVKWRGSPLSQL 736
Query: 167 ---TMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
++ + +G++P+ + +SV++++HAQDS H+ N
Sbjct: 737 RIPSITELMGYDPEDLLNRSVYEYYHAQDSDHLTKTHHN 775
>gi|213511440|ref|NP_001133494.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
gi|209154226|gb|ACI33345.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 628
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 61/212 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA-----------NHTEDIRAQRSVFIRLKCTLTS 50
+++L+GQS+Y+ HPCD E++ +L+ HTE + F+R+K TLTS
Sbjct: 125 QLELLGQSVYDFVHPCDQEELRDLLAPRPGVSKKKPAQQHTE-----MNFFLRMKSTLTS 179
Query: 51 KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
+GR VN+K+AT+KV+HCTGH+ +DS
Sbjct: 180 RGRTVNIKSATWKVLHCTGHM------------------------------RVCCSGEDS 209
Query: 111 EPEEEVGEKRRVVTEPSHCFVAI-GEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETM 168
P P+ F+ + EPIPHP++ + PL Q TFLT+HS+D++FT+ D +
Sbjct: 210 SP-------------PAGSFMTVLCEPIPHPSSVEFPLDQSTFLTRHSMDLRFTHCDGRV 256
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ +G+ P+ I KS + FHHA DS H+ +
Sbjct: 257 SELVGYEPEDLIGKSAYKFHHALDSDHVTKSL 288
>gi|12857320|dbj|BAB30975.1| unnamed protein product [Mus musculus]
Length = 258
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 100/171 (58%), Gaps = 43/171 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ +++ QRS F+R+KCTLTS+GR +N
Sbjct: 124 QFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMN 183
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + D + ++P +
Sbjct: 184 IKSATWKVLHCTGHI-------------------------------HVYDTNSNQP--QC 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 211 GYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 257
>gi|20072846|gb|AAH26308.1| HIF3A protein [Homo sapiens]
Length = 363
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE-----DIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T + R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEARTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GS-----PDSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|350585333|ref|XP_003356031.2| PREDICTED: hypoxia-inducible factor 3-alpha [Sus scrofa]
Length = 385
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 39/198 (19%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 56 QLELIGHSIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN 115
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + P S S P N+E
Sbjct: 116 LKAATWKVLHCSGHM-RAYKPPSQTSPAGSPGPNLE------------------------ 150
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G+
Sbjct: 151 --------PPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYR 202
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 203 PDDLIGCSAYEYIHALDS 220
>gi|343055667|gb|AEL79598.1| endothelial PAS domain protein 1 [Ovis aries]
gi|343055670|gb|AEL79599.1| endothelial PAS domain protein 1 [Pantholops hodgsonii]
Length = 172
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 48/201 (23%)
Query: 14 THPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIH 66
THPCDH E++ LS ++D+ +R F+R+KCT+T +GR VN+K+AT+KV+H
Sbjct: 2 THPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTDRGRTVNLKSATWKVLH 61
Query: 67 CTGHL--VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVT 124
CTG + N P S+ EP +
Sbjct: 62 CTGQVKVYSNCPPHSSLCGCKEPLLS---------------------------------- 87
Query: 125 EPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S
Sbjct: 88 ----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELVGYHPEELLGRS 143
Query: 184 VFDFHHAQDSFHIQNAFKNPC 204
++F+HA DS ++ + +N C
Sbjct: 144 AYEFYHALDSENMTKSHQNLC 164
>gi|343055472|gb|AEL79591.1| endothelial PAS domain protein 1 [Ochotona curzoniae]
Length = 172
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 46/200 (23%)
Query: 14 THPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIH 66
THPCDH E++ L+ +D+ +R F+R+KCT+T++GR VN+K+AT+KV+H
Sbjct: 2 THPCDHEEIRENLTLKGGSGFGKKNKDMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLH 61
Query: 67 CTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTE 125
CTG + V + P N G K +++
Sbjct: 62 CTGQVKVYSDCPPHNSL---------------------------------CGYKEPLMS- 87
Query: 126 PSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S
Sbjct: 88 ---CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSA 144
Query: 185 FDFHHAQDSFHIQNAFKNPC 204
++F+HA DS ++ + +N C
Sbjct: 145 YEFYHALDSENMTKSHQNLC 164
>gi|119577815|gb|EAW57411.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_d [Homo
sapiens]
Length = 614
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|426389306|ref|XP_004061064.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Gorilla
gorilla gorilla]
Length = 600
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA ++ DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|332856288|ref|XP_001167499.2| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Pan
troglodytes]
Length = 600
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|355703683|gb|EHH30174.1| hypothetical protein EGK_10787 [Macaca mulatta]
Length = 669
Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA T GS DSEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQTSPT-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|326807022|ref|NP_071907.4| hypoxia-inducible factor 3-alpha isoform b [Homo sapiens]
gi|194387600|dbj|BAG60164.1| unnamed protein product [Homo sapiens]
Length = 600
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA ++ DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|18448895|gb|AAL69947.1|AF463492_1 inhibitory PAS domain protein [Homo sapiens]
gi|119577814|gb|EAW57410.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_c [Homo
sapiens]
gi|167735809|dbj|BAG07185.1| hypoxia-inducible factor-3alpha2 [Homo sapiens]
Length = 632
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|397493293|ref|XP_003817543.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Pan
paniscus]
Length = 600
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGVFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|194389168|dbj|BAG61601.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 70 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 129
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA ++ DSEP
Sbjct: 130 LKAATWKVLNCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 163
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 164 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 214
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 215 PDDLIGCSAYEYIHALDS 232
>gi|119577817|gb|EAW57413.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_f [Homo
sapiens]
Length = 567
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA ++ DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|332856290|ref|XP_003316502.1| PREDICTED: hypoxia-inducible factor 3-alpha [Pan troglodytes]
Length = 450
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQTSPA----------------------GSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|194388242|dbj|BAG65505.1| unnamed protein product [Homo sapiens]
Length = 339
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 65 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA ++ DSEP
Sbjct: 125 LKAATWKVLNCSGHMRAYKPPAQ----------------------TSPAGSPDSEP---- 158
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 159 ---------PLQCLVLICETIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 209
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 210 PDDLIGCSAYEYIHALDS 227
>gi|426389308|ref|XP_004061065.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Gorilla
gorilla gorilla]
Length = 450
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQTSPA----------------------GSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|410910578|ref|XP_003968767.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Takifugu
rubripes]
Length = 658
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 52/210 (24%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRN 54
++++L+GQS+Y+ HPCD E+ +L+ +D+ + F+R+K TLT++GR
Sbjct: 129 VQLELLGQSVYDFIHPCDQEELTDLLTPRPGLNKKLMKDLPNDLNFFLRMKSTLTNRGRT 188
Query: 55 VNVKAATYKVIHCTGHLVQ-NQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
VN+K+A +KV+HCTGH+ P+S +
Sbjct: 189 VNIKSAEWKVLHCTGHMCPFGGEPSSPAA------------------------------- 217
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
+ V + EPIPHP++ + PL + TFLT+HS+D++FT+ + + + +
Sbjct: 218 -------------ARVMVLLCEPIPHPSSVEFPLDTYTFLTRHSMDLRFTHCEGRVTELV 264
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
G+ PD I +S F+FHHA DS HI + +
Sbjct: 265 GYKPDDLIGRSAFEFHHALDSDHISKSLRT 294
>gi|119577813|gb|EAW57409.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_b [Homo
sapiens]
Length = 580
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 65 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 125 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 158
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 159 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 209
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 210 PDDLIGCSAYEYIHALDS 227
>gi|62148944|dbj|BAD93355.1| hypoxia-inducible factor-3 alpha 4 [Homo sapiens]
gi|119577818|gb|EAW57414.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_g [Homo
sapiens]
Length = 363
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GS-----PDSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|23065541|ref|NP_690009.1| hypoxia-inducible factor 3-alpha isoform d [Homo sapiens]
gi|119577812|gb|EAW57408.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_a [Homo
sapiens]
Length = 450
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQTSPA----------------------GSPDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 196
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 197 PDDLIGCSAYEYIHALDS 214
>gi|149056848|gb|EDM08279.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 627
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKSEAATGRHFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA Q P E
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPA--------------------------QTSPAGSPRSE- 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 212 --------PPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|407316778|gb|AFU07571.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
nobilis]
Length = 646
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 52/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQS+YE HPCD E++ IL S TE + A+ + F+R+K TLT GR V
Sbjct: 122 QLELLGQSVYEFVHPCDQEELRDILTTRPGISKKKTEKL-AEHNFFLRMKSTLTHTGRTV 180
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+A +KV+HCTGH+ QT +S+ T +
Sbjct: 181 NIKSANWKVLHCTGHM---QTFSSDDETSL------------------------------ 207
Query: 116 VGEKRRVVTEPSHCFVA-IGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
P+ F+ + EPIPHP++ + PL S TFLT+HS+D+ FT D + + +G
Sbjct: 208 ----------PAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHSMDLTFTQCDGRVTELVG 257
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ PD I +S ++F+HA D H+ +
Sbjct: 258 YQPDDLIGRSAYEFYHALDFDHVTRSL 284
>gi|403299069|ref|XP_003940314.1| PREDICTED: hypoxia-inducible factor 3-alpha [Saimiri boliviensis
boliviensis]
Length = 633
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 102/198 (51%), Gaps = 42/198 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR------AQRSVFIRLKCTLTSKGRNV 55
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKAEAPPTERCFSLRMKSTLTSRGRTL 180
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+KAAT+KV+HC+GH+ + PA +SEP
Sbjct: 181 NLKAATWKVLHCSGHMRAYKPPAQTSPA----------------------GSPNSEP--- 215
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGF 174
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G+
Sbjct: 216 ----------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGY 265
Query: 175 NPDIFIAKSVFDFHHAQD 192
+PD I S +++ HA D
Sbjct: 266 SPDDLIGCSAYEYIHALD 283
>gi|56785781|gb|AAW29028.1| hypoxia-inducible factor 4 alpha [Epinephelus coioides]
Length = 674
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 50/206 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSI------LSANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQSIY+ HPCD E++ + LS + +R+ F+R+K TLTS+GR V
Sbjct: 126 QLELLGQSIYDFVHPCDQEELRDLMAPRPGLSKKPLAQQQNERNFFLRMKSTLTSRGRTV 185
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+A +KV+HCTG++ Q +GS+ + P
Sbjct: 186 NIKSAAWKVLHCTGYIHQF-----DGSSRLSPAG-------------------------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGF 174
RV+T + EPIPHP++ + PL TFLT+HS+D+ FT+ + + + +G+
Sbjct: 215 -----RVMT-------LLCEPIPHPSSVEFPLGTCTFLTRHSMDLCFTHCEGRVTELVGY 262
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
P+ I +S ++FHHA DS H+ +
Sbjct: 263 KPEDLIGRSAYEFHHALDSDHVNKSL 288
>gi|407316786|gb|AFU07575.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
molitrix]
Length = 633
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 52/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQS+YE HPCD E++ IL S TE + A+ + F+R+K TLT GR V
Sbjct: 115 QLELLGQSVYEFVHPCDQEELRDILTTRPGISKKKTEKL-AEHNFFLRMKSTLTHTGRTV 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+A +KV+HCTGH+ QT +S+ T +
Sbjct: 174 NIKSANWKVLHCTGHM---QTFSSDDETSL------------------------------ 200
Query: 116 VGEKRRVVTEPSHCFVA-IGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
P+ F+ + EPIPHP++ + PL S TFLT+HS+D+ FT D + + +G
Sbjct: 201 ----------PAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHSMDLTFTQCDGRVTELVG 250
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ PD I +S ++F+HA D H+ +
Sbjct: 251 YQPDDLIGRSAYEFYHALDFDHVTRSL 277
>gi|395854190|ref|XP_003799581.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Otolemur
garnettii]
Length = 600
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 41/199 (20%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNV 55
+ ++L+G SI++ HPCD E++ L+ + + +R +R+K TLT +GR +
Sbjct: 51 LLLELIGHSIFDFIHPCDQEELQDALTPQQSLSKKKPEAPTERCFSLRMKSTLTGRGRTL 110
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+KAAT+KV+HC+GH+ + P T +SEP
Sbjct: 111 NLKAATWKVLHCSGHMRVYRPPMKTSPT----------------------GSPNSEP--- 145
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGF 174
P C V I E IPHP + + PL Q FL++HSLDMKFTY DE + + G+
Sbjct: 146 ----------PLQCLVLICEAIPHPGSLEPPLGQGAFLSRHSLDMKFTYCDERIAEVAGY 195
Query: 175 NPDIFIAKSVFDFHHAQDS 193
+PD I S +++ HA DS
Sbjct: 196 SPDDLIGCSAYEYIHALDS 214
>gi|407316782|gb|AFU07573.1| hypoxia-inducible factor 3 alpha subunit [Gymnocypris namensis]
Length = 594
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 52/208 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQS+YE+ HPCD E++ IL S TE + + S F+R+K TLT GR V
Sbjct: 122 QLELLGQSVYELVHPCDQEELRDILATRPGVSKKKTEKL-TKHSFFLRMKSTLTHTGRTV 180
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+A +KV+HCTGH+ QT + +G ++EP
Sbjct: 181 NIKSANWKVLHCTGHM---QTFSGDG---------------------------ENEP--- 207
Query: 116 VGEKRRVVTEPSHCFVA-IGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
P+ F+ + EPIPHP++ + PL S TFLT+H +D+ FT D + + +G
Sbjct: 208 ----------PAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHKMDLSFTQCDGRVTELVG 257
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ PD I +S ++F+HA D H+ + +
Sbjct: 258 YQPDDLIGRSAYEFYHALDFDHVTRSLQ 285
>gi|6650272|gb|AAF21782.1| hypoxia-inducible factor 3 alpha [Mus musculus]
Length = 630
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 47/201 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
+KAAT+KV+HC+GH+ + PA GS EP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEP-------------------------- 212
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFL 172
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + +
Sbjct: 213 ------------PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVA 260
Query: 173 GFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 261 GYSPDDLIGCSAYEYIHALDS 281
>gi|427794751|gb|JAA62827.1| Putative hypoxia-inducible factor 1 alpha subunit basic
helix-loop-helix transcription factor b, partial
[Rhipicephalus pulchellus]
Length = 988
Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL--SANHTEDIRAQRSVFI-RLKCTLTSKGRNVNVK 58
+VDLMGQS+YE HPCDH E+K+ L D+ Q F+ RL+CTL SKGR V+VK
Sbjct: 235 QVDLMGQSVYEYCHPCDHDELKAALLPKPEDLHDLSPQPCHFLMRLRCTLGSKGRGVSVK 294
Query: 59 AAT-YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
+A+ YK++ C G V + + P+ + E + + + + +++ P V
Sbjct: 295 SASSYKMMQCVGTRVSRE---------VAPKHSPEEEQPSPLPAAVVTKEEEETPATAVP 345
Query: 118 EK--RRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
++ E H V + +PIPHP+N + PL + TFL++H+ M FT+ D+ E FLG+
Sbjct: 346 HLPISIIIRERRHFLVCVAQPIPHPSNIEAPLGTHTFLSRHNPSMCFTHVDDRTETFLGY 405
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ + + KSV+ + +D ++Q FK
Sbjct: 406 SSEELLGKSVYSYFDPRDVLNLQQDFK 432
>gi|343055676|gb|AEL79601.1| endothelial PAS domain protein 1 [Ovis ammon]
Length = 172
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 48/201 (23%)
Query: 14 THPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIH 66
THPCDH E++ LS ++D+ +R F+R+KCT+T++GR VN+K+AT+KV+H
Sbjct: 2 THPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLH 61
Query: 67 CTGHL--VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVT 124
CTG + N P S+ EP +
Sbjct: 62 CTGQVKVYSNCPPHSSLCGCKEPLLS---------------------------------- 87
Query: 125 EPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY + + + +G++P+ + +S
Sbjct: 88 ----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCGDRITELVGYHPEELLGRS 143
Query: 184 VFDFHHAQDSFHIQNAFKNPC 204
++F+HA DS ++ + +N C
Sbjct: 144 AYEFYHALDSENMTKSHQNLC 164
>gi|332257097|ref|XP_003277652.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Nomascus
leucogenys]
Length = 669
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|351697932|gb|EHB00851.1| Hypoxia-inducible factor 3 alpha, partial [Heterocephalus glaber]
Length = 658
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + QR +R+K TLTS+GR +N
Sbjct: 113 QLELIGHSIFDFVHPCDQEELQDALTPRPSLSKKKPEAPTQRCFSLRMKSTLTSRGRTLN 172
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + S+G A+ SEP
Sbjct: 173 LKAATWKVLHCSGHM---RAYKSSGQ-------------------PALAGNPSSEP---- 206
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP N + PL + FLT+HSLDMKFTY DE + + G++
Sbjct: 207 ---------PLQCLVLICEAIPHPGNLEPPLGRGAFLTRHSLDMKFTYCDERIAEVAGYS 257
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 258 PDDLIGCSAYEYIHALDS 275
>gi|332257099|ref|XP_003277653.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Nomascus
leucogenys]
Length = 667
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA GS DSEP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|14042618|dbj|BAB55324.1| unnamed protein product [Homo sapiens]
Length = 632
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + P GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPVQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|355755960|gb|EHH59707.1| hypothetical protein EGM_09889, partial [Macaca fascicularis]
Length = 665
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|410982678|ref|XP_003997675.1| PREDICTED: hypoxia-inducible factor 3-alpha [Felis catus]
Length = 600
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 47/201 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQQELQDALTPRPSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
+KAAT+KV++C+GH+ + PA GS +EP
Sbjct: 112 LKAATWKVLYCSGHMRAYKPPAQTSPEGSPNLEP-------------------------- 145
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFL 172
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + +
Sbjct: 146 ------------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVA 193
Query: 173 GFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 194 GYSPDDLIGCSAYEYIHALDS 214
>gi|431909193|gb|ELK12783.1| Hypoxia-inducible factor 3 alpha [Pteropus alecto]
Length = 678
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCDH E++ L+ + + ++R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDHEELQDALTPQQSLSRKKPEAPSERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + +PQ +Q P E
Sbjct: 181 LKAATWKVLHCSGHM-----------RVYKPQ---------------VQTSPAGSPGGE- 213
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 214 --------PPLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S + + HA DS
Sbjct: 266 PDDLIGCSAYKYIHALDS 283
>gi|281353701|gb|EFB29285.1| hypothetical protein PANDA_012188 [Ailuropoda melanoleuca]
Length = 603
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 51/203 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 114 QLELIGHSIFDFIHPCDQEELQDALTPQQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN 173
Query: 57 VKAATYKVIHCTGHL-----VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
+KAAT+KV+HC+GH+ + +PA GS +EP
Sbjct: 174 LKAATWKVLHCSGHMRAYKPLAQTSPA--GSPNLEP------------------------ 207
Query: 112 PEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMED 170
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + +
Sbjct: 208 --------------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAE 253
Query: 171 FLGFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 254 VAGYSPDDLIGCSAYEYIHALDS 276
>gi|40849967|gb|AAR95698.1| hypoxia-inducible factor-4alpha [Ctenopharyngodon idella]
Length = 643
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 52/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQS+YE HPCD E++ IL S TE + A+ + F+R+K TLT GR V
Sbjct: 122 QLELLGQSVYEFVHPCDQEELRDILTTRPGISKKKTEKL-AEHNFFLRMKSTLTHTGRTV 180
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+A +KV+HCTGH+ QT + + T +
Sbjct: 181 NMKSANWKVLHCTGHM---QTFSGDDETSL------------------------------ 207
Query: 116 VGEKRRVVTEPSHCFVA-IGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
P+ F+ + EPIPHP++ + PL S TFLT+HS+D+ FT D + + +G
Sbjct: 208 ----------PAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHSMDLTFTQCDGRVTELVG 257
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ PD I +S ++F+HA D H+ +
Sbjct: 258 YQPDDLIGRSAYEFYHALDFDHVTRSL 284
>gi|47230125|emb|CAG10539.1| unnamed protein product [Tetraodon nigroviridis]
Length = 385
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 85/249 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-------------------SANHTEDIRAQRSVFI 42
+ DL G S+++ HPCD E++ +L + ++ +R F+
Sbjct: 125 QFDLTGHSVFDFIHPCDQEELREMLIHRTESLFPLLNRHCRLISGSKKAKEPNTERRFFL 184
Query: 43 RLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGS 102
R+KCTLTS+GR VNVK+AT+KV+HC GH+ +++PA EP
Sbjct: 185 RMKCTLTSRGRTVNVKSATWKVLHCLGHVRVHESPA-------EP--------------- 222
Query: 103 AIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKF 161
D D ++P V I +PIPHPAN + PL ++TFL++H++DMKF
Sbjct: 223 ---DPDGAQPSA------------VPYLVLICDPIPHPANIEFPLDTKTFLSRHTMDMKF 267
Query: 162 TYADE----------------------------TMEDFLGFNPDIFIAKSVFDFHHAQDS 193
TY DE + + +G++P+ + +SV++++HAQDS
Sbjct: 268 TYCDERQVIPVKWRGSPLSQLSTLTFVTPFCLSRITELMGYDPEDLLNRSVYEYYHAQDS 327
Query: 194 FHIQNAFKN 202
H+ N
Sbjct: 328 DHLTKTHHN 336
>gi|395529671|ref|XP_003766932.1| PREDICTED: hypoxia-inducible factor 3-alpha [Sarcophilus harrisii]
Length = 1015
Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G S+++ HPCD E++ +L+ + + +RS +R+K TLTS+GR +N
Sbjct: 446 QLELIGHSVFDFVHPCDQEELQDVLTPRQGLSKKKMEAPTERSFSLRMKSTLTSRGRTLN 505
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HCTGH+ + +P S S P EP
Sbjct: 506 LKAATWKVLHCTGHM-RAYSPPSESSAGGAP---------------------GPEP---- 539
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP++ + PL + FL++H+LDMKFTY DE + + G+
Sbjct: 540 ---------PLRCLVLICEAIPHPSSLEPPLGRGAFLSRHTLDMKFTYCDERISEVAGYC 590
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 591 PDDLIGCSAYEYIHALDS 608
>gi|294961108|gb|ADF50045.1| hypoxia-inducible factor 3 alpha [Megalobrama amblycephala]
Length = 643
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 52/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQS+YE HPCD E++ IL S TE + A+ + F+R+K TLT GR V
Sbjct: 122 QLELLGQSVYEFVHPCDQEELRDILTTRPGISKKKTEKL-AEHNFFLRMKSTLTHTGRTV 180
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+A +KV+HCTGH+ QT + + + +
Sbjct: 181 NIKSANWKVLHCTGHM---QTFSGDDESSL------------------------------ 207
Query: 116 VGEKRRVVTEPSHCFVA-IGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
P+ F+ + EPIPHP++ + PL S TFLT+HS+D+ FT D + + +G
Sbjct: 208 ----------PAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHSMDLTFTQCDGRVTELVG 257
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ PD I +S ++F+HA D H+ +
Sbjct: 258 YQPDDLIGRSAYEFYHALDFDHVTRSL 284
>gi|297277407|ref|XP_001108464.2| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 1 [Macaca
mulatta]
Length = 669
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQNLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|426389302|ref|XP_004061062.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Gorilla
gorilla gorilla]
Length = 669
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|10432879|dbj|BAB13865.1| unnamed protein product [Homo sapiens]
Length = 648
Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 65 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 125 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 158
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 159 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 209
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 210 PDDLIGCSAYEYIHALDS 227
>gi|397493289|ref|XP_003817541.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Pan
paniscus]
Length = 669
Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGVFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|348557855|ref|XP_003464734.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Cavia porcellus]
Length = 667
Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + P+ +A+ SEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPSQ----------------------TALAGSPSSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|426243045|ref|XP_004015376.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Ovis aries]
Length = 609
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 47/201 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G +I++ HPCD E++ L+ + + R +R+K TL+S+GR +N
Sbjct: 52 QLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTGRCFSLRMKSTLSSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
+KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 112 LKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEP-------------------------- 145
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFL 172
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + +
Sbjct: 146 ------------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVA 193
Query: 173 GFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 194 GYSPDDLIGCSAYEYIHALDS 214
>gi|297277409|ref|XP_002801349.1| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 2 [Macaca
mulatta]
Length = 667
Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ R +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQNLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA GS DSEP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|426389304|ref|XP_004061063.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Gorilla
gorilla gorilla]
Length = 667
Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 179 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|90421311|ref|NP_690008.2| hypoxia-inducible factor 3-alpha isoform c [Homo sapiens]
gi|145558932|sp|Q9Y2N7.2|HIF3A_HUMAN RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=Class E basic helix-loop-helix protein 17;
Short=bHLHe17; AltName: Full=HIF3-alpha-1; AltName:
Full=Inhibitory PAS domain protein; Short=IPAS; AltName:
Full=Member of PAS protein 7; AltName: Full=PAS
domain-containing protein 7
gi|261858714|dbj|BAI45879.1| hypoxia inducible factor 3, alpha subunit [synthetic construct]
Length = 669
Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|51874048|gb|AAH80551.1| Hypoxia inducible factor 3, alpha subunit [Homo sapiens]
Length = 669
Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|397493291|ref|XP_003817542.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Pan
paniscus]
Length = 667
Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 179 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPGSLEPPLGRGVFLSRHSLDMKFTYCDDRIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|189054460|dbj|BAG37233.1| unnamed protein product [Homo sapiens]
Length = 667
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 179 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|114677981|ref|XP_001167523.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Pan
troglodytes]
Length = 667
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 179 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|23065535|ref|NP_690007.1| hypoxia-inducible factor 3-alpha isoform a [Homo sapiens]
gi|4558637|gb|AAD22668.1|AC007193_2 Putative homolog of hypoxia inducible factor three alpha [Homo
sapiens]
gi|16040975|dbj|BAB69689.1| hypoxia-inducible factor-3 alpha [Homo sapiens]
gi|119577816|gb|EAW57412.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_e [Homo
sapiens]
Length = 667
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 179 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GSP-----DSEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|344247445|gb|EGW03549.1| Hypoxia-inducible factor 3 alpha [Cricetulus griseus]
Length = 272
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 103/199 (51%), Gaps = 42/199 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + R +R +R+K TLTS+GR +
Sbjct: 56 QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKLEARTERHFSLRMKSTLTSRGRTLT 115
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA T SEP
Sbjct: 116 LKAATWKVLHCSGHMRAYKPPAQTSPT----------------------GSPRSEP---- 149
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E +PHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 150 ---------PLQCLVLICEALPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 200
Query: 176 PDIFIAKSVFD-FHHAQDS 193
PD I +D + HA DS
Sbjct: 201 PDDLIGCYAYDEYIHALDS 219
>gi|350585329|ref|XP_003127298.3| PREDICTED: LOW QUALITY PROTEIN: hypoxia-inducible factor
3-alpha-like [Sus scrofa]
Length = 776
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 39/198 (19%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 226 QLELIGHSIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN 285
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + P S S P N+E
Sbjct: 286 LKAATWKVLHCSGHM-RAYKPPSQTSPAGSPGPNLE------------------------ 320
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G+
Sbjct: 321 --------PPLQCLVLICEAIPHPDSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYR 372
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 373 PDDLIGCSAYEYIHALDS 390
>gi|296234167|ref|XP_002762300.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Callithrix
jacchus]
Length = 670
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 42/198 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR------AQRSVFIRLKCTLTSKGRNV 55
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKAEAPPTERCFSLRMKSTLTSRGRTL 180
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+KAAT+KV+HC+GH+ + PA GS SEP
Sbjct: 181 NLKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----SSEP--- 215
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGF 174
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G+
Sbjct: 216 ----------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGY 265
Query: 175 NPDIFIAKSVFDFHHAQD 192
+PD I S +++ HA D
Sbjct: 266 SPDDLIGCSAYEYIHALD 283
>gi|407316784|gb|AFU07574.1| hypoxia-inducible factor 3 alpha subunit [Polyodon spathula]
Length = 532
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 53/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
++DL+GQS+++ HPCD E++ IL++ ++D+ +RS F+R+K TLTSKGR +
Sbjct: 119 QLDLVGQSVFDFIHPCDQEELRDILTSKQRVGKKQSQDVHTERSFFLRMKSTLTSKGRTL 178
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ K+A +KV+ C+GH I +EP
Sbjct: 179 SSKSAAWKVLQCSGH---------------------------------IHTYSSAEP--- 202
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGF 174
P C + EPIP+P++ D PL ++ FL++HS+D+ F DE + + LG+
Sbjct: 203 ----------PLTCLTVLCEPIPNPSHIDFPLDRSVFLSRHSMDLHFVQCDERVTELLGY 252
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+P+ I S ++++HA D+ H+ + +
Sbjct: 253 SPEDLIGHSAYEYYHALDTDHVTKSLQ 279
>gi|251823727|ref|NP_001156422.1| hypoxia-inducible factor 3-alpha isoform 1 [Mus musculus]
Length = 664
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA S P+ SEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQT-SPAGSPR---------------------SEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|121581812|dbj|BAF44519.1| hypoxia inducible factor 3 alpha [Mus musculus]
Length = 664
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA S P+ SEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQT-SPAGSPR---------------------SEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 215 ---------PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 265
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 266 PDDLIGCSAYEYIHALDS 283
>gi|296234169|ref|XP_002762301.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Callithrix
jacchus]
Length = 668
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 42/198 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR------AQRSVFIRLKCTLTSKGRNV 55
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKAEAPPTERCFSLRMKSTLTSRGRTL 178
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+KAAT+KV+HC+GH+ + PA GS SEP
Sbjct: 179 NLKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GSP-----SSEP--- 213
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGF 174
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G+
Sbjct: 214 ----------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGY 263
Query: 175 NPDIFIAKSVFDFHHAQD 192
+PD I S +++ HA D
Sbjct: 264 SPDDLIGCSAYEYIHALD 281
>gi|111306675|gb|AAI20588.1| Hypoxia inducible factor 3, alpha subunit [Mus musculus]
Length = 662
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA S P+ SEP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQT-SPAGSPR---------------------SEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|3859464|gb|AAC72734.1| hypoxia inducible factor three alpha [Mus musculus]
Length = 662
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA S P+ SEP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQT-SPAGSPR---------------------SEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|407316788|gb|AFU07576.1| hypoxia-inducible factor 3 alpha subunit [Schizothorax prenanti]
Length = 628
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 52/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQS+YE HPCD E++ IL S TE + + + F+R+K TLT GR V
Sbjct: 120 QLELLGQSVYEFVHPCDQEELRDILATRPGVSKKKTEKL-TKHNFFLRMKSTLTHTGRTV 178
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+AT+KV+HCTGH+ QT + +G ++EP
Sbjct: 179 NLKSATWKVLHCTGHM---QTFSGDG---------------------------ENEP--- 205
Query: 116 VGEKRRVVTEPSHCFVA-IGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
P+ F+ + EPIPHP++ + L S TFLT+H++D+ FT D + + +G
Sbjct: 206 ----------PAGSFLTLLCEPIPHPSSVEFLLDSSTFLTRHNMDLSFTQCDGRVTELVG 255
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ PD I +S ++F+HA D H+ +
Sbjct: 256 YQPDDLIGRSAYEFYHALDFDHVTRSL 282
>gi|170295859|ref|NP_058564.2| hypoxia-inducible factor 3-alpha isoform 2 [Mus musculus]
gi|341940802|sp|Q0VBL6.2|HIF3A_MOUSE RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=HIF3-alpha-1; AltName: Full=Inhibitory PAS domain
protein; Short=IPAS; AltName: Full=Member of PAS protein
7
Length = 662
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA S P+ SEP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQT-SPAGSPR---------------------SEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|295001556|gb|ADF58783.1| hypoxia-inducible factor 3 alpha subunit isoform 1 [Danio rerio]
Length = 626
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 45/202 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--TEDIRAQRSVFIRLKCTLTSKGRNVNVKA 59
+++L+GQS+YE HPCD E++ IL+ ++ + + F+R+K TLT GR VN+K+
Sbjct: 121 QLELLGQSVYEFVHPCDQEELRDILATRPGVSKKKTMEHNFFLRMKSTLTHTGRTVNIKS 180
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
AT+KV+HCTGH M+P D++ P
Sbjct: 181 ATWKVLHCTGH--------------MQP----------------FSGDDENSPSA----- 205
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDI 178
+ EPIPHP++ + PL S TFLT+H+LD+ +T D + + +G+ PD
Sbjct: 206 -------GSFLTLLCEPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCDGRVTELVGYQPDD 258
Query: 179 FIAKSVFDFHHAQDSFHIQNAF 200
I +S F+F HA D H+ +
Sbjct: 259 LIGRSAFEFFHALDFDHVSRSL 280
>gi|395854188|ref|XP_003799580.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Otolemur
garnettii]
Length = 666
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLT +GR +N
Sbjct: 118 QLELIGHSIFDFIHPCDQEELQDALTPQQSLSKKKPEAPTERCFSLRMKSTLTGRGRTLN 177
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + P T GS +SEP
Sbjct: 178 LKAATWKVLHCSGHMRVYRPPMKTSPT-----------------GSP-----NSEP---- 211
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL Q FL++HSLDMKFTY DE + + G++
Sbjct: 212 ---------PLQCLVLICEAIPHPGSLEPPLGQGAFLSRHSLDMKFTYCDERIAEVAGYS 262
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 263 PDDLIGCSAYEYIHALDS 280
>gi|37594329|gb|AAQ94179.1| Hif3a [Danio rerio]
Length = 626
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 45/202 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--TEDIRAQRSVFIRLKCTLTSKGRNVNVKA 59
+++L+GQS+YE HPCD E++ IL+ ++ + + F+R+K TLT GR VN+K+
Sbjct: 121 QLELLGQSVYEFVHPCDQEELRDILATRPGVSKKKTMEHNFFLRMKSTLTHTGRTVNIKS 180
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
AT+KV+HCTGH M+P + S + GS +
Sbjct: 181 ATWKVLHCTGH--------------MQPFSGDDENSPSA--GSFL--------------- 209
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDI 178
+ EPIPHP++ + PL S TFLT+H+LD+ +T D + + +G+ PD
Sbjct: 210 -----------TLLCEPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCDGRVTELVGYQPDD 258
Query: 179 FIAKSVFDFHHAQDSFHIQNAF 200
I +S F+F HA D H+ +
Sbjct: 259 LIGRSAFEFFHALDFDHVSRSL 280
>gi|41055377|ref|NP_956699.1| hypoxia-inducible factor 3-alpha [Danio rerio]
gi|32451899|gb|AAH54582.1| Hypoxia-inducible factor 1, alpha subunit, like [Danio rerio]
Length = 571
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 45/202 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--TEDIRAQRSVFIRLKCTLTSKGRNVNVKA 59
+++L+GQS+YE HPCD E++ IL+ ++ + + F+R+K TLT GR VN+K+
Sbjct: 66 QLELLGQSVYEFVHPCDQEELRDILATRPGVSKKKTMEHNFFLRMKSTLTHTGRTVNIKS 125
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
AT+KV+HCTGH M+P + S + GS +
Sbjct: 126 ATWKVLHCTGH--------------MQPFSGDDENSPSA--GSFL--------------- 154
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDI 178
+ EPIPHP++ + PL S TFLT+H+LD+ +T D + + +G+ PD
Sbjct: 155 -----------TLLCEPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCDGRVTELVGYQPDD 203
Query: 179 FIAKSVFDFHHAQDSFHIQNAF 200
I +S F+F HA D H+ +
Sbjct: 204 LIGRSAFEFFHALDFDHVSRSL 225
>gi|11968112|ref|NP_071973.1| hypoxia-inducible factor 3-alpha [Rattus norvegicus]
gi|81917470|sp|Q9JHS2.1|HIF3A_RAT RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName: Full=HIF3-alpha-1
gi|8953575|emb|CAB96611.1| hypoxia inducible factor 3 alpha [Rattus norvegicus]
Length = 662
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 41/198 (20%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKSEAATGRHFSLRMKSTLTSRGRALN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA S P+ SEP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQT-SPAGSPR---------------------SEP---- 212
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 213 ---------PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 263
Query: 176 PDIFIAKSVFDFHHAQDS 193
PD I S +++ HA DS
Sbjct: 264 PDDLIGCSAYEYIHALDS 281
>gi|344269355|ref|XP_003406518.1| PREDICTED: hypoxia-inducible factor 3-alpha [Loxodonta africana]
Length = 670
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 102/198 (51%), Gaps = 45/198 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G S+++ HPCD E++ L+ + + QR +R+K TLTS+GR +N
Sbjct: 171 QLELIGHSVFDFIHPCDQEELQDALTPRQSLSKKKLEAPTQRCFSLRMKSTLTSRGRTLN 230
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA Q D EP
Sbjct: 231 LKAATWKVLHCSGHMRAYKPPA--------------------------QTSPDLEP---- 260
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G++
Sbjct: 261 ---------PLRCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYS 311
Query: 176 PDIFIAKSVFDFHHAQDS 193
P+ I S + + HA DS
Sbjct: 312 PEDLIGCSAYKYIHALDS 329
>gi|407316780|gb|AFU07572.1| hypoxia-inducible factor 3 alpha subunit [Acipenser sinensis]
Length = 530
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 53/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIRAQRSVFIRLKCTLTSKGRNV 55
++DL+GQ +++ HPCD E++ IL+ ++D+ +RS F+R+K TLTS+GR +
Sbjct: 119 QLDLVGQRVFDFIHPCDQEELRDILTPRQRVGKKQSQDVHTERSFFLRMKSTLTSRGRTL 178
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ K+A +KV+ C+GH I +EP
Sbjct: 179 SSKSAAWKVLLCSGH---------------------------------IHTYSSAEP--- 202
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGF 174
P C + EPIP P++ D PL ++ FL++HS+D+ FT DE + + LG+
Sbjct: 203 ----------PLTCLTVLCEPIPDPSHIDFPLDRSAFLSRHSMDLCFTQCDERVTELLGY 252
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+P+ I S +++HHA D+ H+ + +
Sbjct: 253 SPEDLIGHSAYEYHHALDTDHVTKSLQ 279
>gi|345785608|ref|XP_533636.3| PREDICTED: hypoxia-inducible factor 3-alpha [Canis lupus
familiaris]
Length = 639
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 47/201 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + ++ +R +R+K TLT+ GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPRQSLSKKKPEVPTERCFSLRMKSTLTNHGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPAS---NGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
+KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 181 LKAATWKVLHCSGHMRVYKPPAQASPAGSPNLEP-------------------------- 214
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFL 172
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + +
Sbjct: 215 ------------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVA 262
Query: 173 GFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 263 GYSPDDLIGCSAYEYIHALDS 283
>gi|325513895|gb|ADZ23996.1| hypoxia-inducible factor 3a [Myxocyprinus asiaticus]
Length = 632
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 50/206 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+GQS+YE HPCD E++ IL+ + + + F+R+K TL GR VN
Sbjct: 122 QLELLGQSVYEFVHPCDQEELRDILTTRPGLSKKKMVKLTEHNFFLRMKSTLMHTGRTVN 181
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTGH+ + +D+S
Sbjct: 182 IKSATWKVLHCTGHI------------------------------QTLSSEDES------ 205
Query: 117 GEKRRVVTEPSHCFVA-IGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
+ P F+ + EPIPHP++ + PL S TFLT+H++D+ FT D + + +G+
Sbjct: 206 -------STPGGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHNMDLTFTQCDGRVTELVGY 258
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
PD I +S ++F+HA D H+ ++
Sbjct: 259 EPDDLIGRSAYEFYHALDFDHVTSSL 284
>gi|380039564|gb|AFD32326.1| hypoxia-inducible factor 2 alpha, partial [Acipenser persicus]
Length = 183
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 40/166 (24%)
Query: 41 FIRLKCTLTSKGRNVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTR 99
F+R+KCT+T++GR VN+K+A++KV+HCTG + V N P EP
Sbjct: 6 FMRMKCTVTNRGRTVNLKSASWKVLHCTGQVKVYNSCPPHTLCGFKEP------------ 53
Query: 100 RGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLD 158
P C V + EPIPHP+N D+PL S+TFL++HS+D
Sbjct: 54 --------------------------PLTCVVMMCEPIPHPSNIDMPLDSKTFLSRHSMD 87
Query: 159 MKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
MKFTY DE + + +G+ P+ + +SV++F+HA DS + + +N C
Sbjct: 88 MKFTYCDERVTELMGYWPEELLGRSVYEFYHALDSDSMTKSHQNLC 133
>gi|241832194|ref|XP_002414889.1| hypoxia-inducible factor 1 alpha, putative [Ixodes scapularis]
gi|215509101|gb|EEC18554.1| hypoxia-inducible factor 1 alpha, putative [Ixodes scapularis]
Length = 324
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 110/240 (45%), Gaps = 74/240 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-------SANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+VDLMGQS++E HPCDH E+K +L + E++ S F+RL+C L SKGR
Sbjct: 120 QVDLMGQSLFEFCHPCDHDELKEVLCPGGAAKAPESGEELPQPCSFFVRLRCALGSKGRG 179
Query: 55 VNVK-AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
V VK A++YKV+HC GH + AS P
Sbjct: 180 VGVKSASSYKVLHCVGHRPPEPSEASPEPCGQAPAK------------------------ 215
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET----- 167
E+RR + V + +PIPHP+N +VPL S+TFL++HS M+FT+A E
Sbjct: 216 ----EQRRFL-------VCVAQPIPHPSNIEVPLGSRTFLSRHSPSMRFTHAKEAHKTII 264
Query: 168 -------------------------MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+E FLG+ D + KSV+ + A+D +Q FK
Sbjct: 265 KHASFCAWLRDIVLIEQLCLFPFLRIEKFLGYTSDELLGKSVYSYFDARDISALQKDFKT 324
>gi|432889669|ref|XP_004075303.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oryzias latipes]
Length = 650
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 51/206 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL------SANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L+GQSIY+ HPCD E++ +L S + + + F+R+K TLT++GR V
Sbjct: 130 QLELLGQSIYDFVHPCDQEELRDLLTPRPGLSKKSLAEQPNEVNFFLRMKSTLTNRGRTV 189
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
N+K+AT+KV+HC+GH+ P S GSA
Sbjct: 190 NIKSATWKVLHCSGHI----RPFS---------------------GSA------------ 212
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGF 174
RV+T + EPIPHP++ + PL TFLT+HS+D++FT+ + + + +G+
Sbjct: 213 APPGARVMT-------LLCEPIPHPSSVEFPLDTCTFLTRHSMDLRFTHCEGRVTELVGY 265
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
P+ + +S ++F+HA DS H++ +
Sbjct: 266 KPEDLVGRSAYEFYHALDSDHMKKSL 291
>gi|157502175|ref|NP_001098812.1| hypoxia-inducible factor 3-alpha [Bos taurus]
gi|157279353|gb|AAI53227.1| HIF3A protein [Bos taurus]
gi|296477442|tpg|DAA19557.1| TPA: hypoxia inducible factor 3, alpha subunit [Bos taurus]
Length = 669
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 47/201 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G +I++ HPCD E++ L+ + + +R +R+K TL+S+GR +N
Sbjct: 121 QLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLSSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
+KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 181 LKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEP-------------------------- 214
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFL 172
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + +
Sbjct: 215 ------------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVA 262
Query: 173 GFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 263 GYSPDDLIGCSAYEYIHALDS 283
>gi|374279662|gb|AEZ04012.1| hypoxia-inducible factor alpha, partial [Callinectes sapidus]
Length = 1026
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 102/200 (51%), Gaps = 53/200 (26%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYK 63
++MG S+Y T+ DHSEV+ + S ++ R F+RLKCTLTSKGR+VN K AT K
Sbjct: 119 EVMGSSLYHYTNMVDHSEVEQLTSF---KNPHQPRRAFLRLKCTLTSKGRSVNFKNATDK 175
Query: 64 VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVV 123
V+ G E VGE+
Sbjct: 176 VVQVIG--------------------------------------------EVVGERADKA 191
Query: 124 TEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
VA+ P+PHP+N + PL QTF+++HSLDMKFTY D +++F G+ + + +
Sbjct: 192 -----WLVALAIPVPHPSNIEFPLDKQTFVSRHSLDMKFTYVDSNVKEFCGYLSEELVGR 246
Query: 183 SVFDFHHAQDSFHIQNAFKN 202
SV++ HHA D+ IQ+A+KN
Sbjct: 247 SVYELHHALDTNLIQDAYKN 266
>gi|301775376|ref|XP_002923099.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Ailuropoda
melanoleuca]
Length = 670
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 51/203 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 122 QLELIGHSIFDFIHPCDQEELQDALTPQQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN 181
Query: 57 VKAATYKVIHCTGHL-----VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
+KAAT+KV+HC+GH+ + +PA GS +EP
Sbjct: 182 LKAATWKVLHCSGHMRAYKPLAQTSPA--GSPNLEP------------------------ 215
Query: 112 PEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMED 170
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + +
Sbjct: 216 --------------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAE 261
Query: 171 FLGFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 262 VAGYSPDDLIGCSAYEYIHALDS 284
>gi|440907533|gb|ELR57674.1| Hypoxia-inducible factor 3-alpha, partial [Bos grunniens mutus]
Length = 660
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 46/200 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR----AQRSVFIRLKCTLTSKGRNVNV 57
+++L+G +I++ HPCD E++ L+ + +R +R+K TL+S+GR +N+
Sbjct: 113 QLELIGHNIFDFIHPCDQEELQDALTPRQLSKKKPEAPTERCFSLRMKSTLSSRGRTLNL 172
Query: 58 KAATYKVIHCTGHLVQNQTPASN---GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 173 KAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEP--------------------------- 205
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLG 173
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G
Sbjct: 206 -----------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAG 254
Query: 174 FNPDIFIAKSVFDFHHAQDS 193
++PD I S +++ HA DS
Sbjct: 255 YSPDDLIGCSAYEYIHALDS 274
>gi|430736528|gb|AGA60316.1| hypoxia inducible factor 1 alpha, partial [Micropterus salmoides]
Length = 158
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 48/178 (26%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLV-----QNQTPASNGSTLM 85
T++ +RS F+R+KCTLTS+GR VNVK+AT+KV+HC+GH+ QTP NG
Sbjct: 17 TKEPNTERSFFLRMKCTLTSRGRTVNVKSATWKVLHCSGHVRVYYSHTEQTP--NG---- 70
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDV 145
EP P V I +PI HP+N +V
Sbjct: 71 -----------------------QKEP-------------PIPYLVLICDPIQHPSNIEV 94
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
PL ++TFL++H++DMKFTY DE + + +G+NP+ + +SV++++HA DS H+ N
Sbjct: 95 PLDTKTFLSRHTMDMKFTYCDERITELMGYNPEDLLNRSVYEYYHALDSDHLTKTHHN 152
>gi|426243043|ref|XP_004015375.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Ovis aries]
Length = 678
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 47/201 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G +I++ HPCD E++ L+ + + R +R+K TL+S+GR +N
Sbjct: 121 QLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTGRCFSLRMKSTLSSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
+KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 181 LKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEP-------------------------- 214
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFL 172
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + +
Sbjct: 215 ------------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVA 262
Query: 173 GFNPDIFIAKSVFDFHHAQDS 193
G++PD I S +++ HA DS
Sbjct: 263 GYSPDDLIGCSAYEYIHALDS 283
>gi|124054321|gb|ABM89374.1| EPAS1 [Pongo pygmaeus]
Length = 259
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 103/176 (58%), Gaps = 39/176 (22%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQD 89
++D+ +R F+R+KCT+T++GR VN+K+AT+KV+HCTG + V N P P
Sbjct: 2 SKDMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLHCTGQVKVYNNCP---------PHS 52
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-S 148
++ G K +++ C + + EPI HP++ D+PL S
Sbjct: 53 SL------------------------CGYKEPLLS----CLIIMCEPIQHPSHMDIPLDS 84
Query: 149 QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 85 KTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 140
>gi|444730767|gb|ELW71141.1| Hypoxia-inducible factor 3-alpha [Tupaia chinensis]
Length = 669
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 67/221 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCDH E++ L+ + + +R + +R+K TLTS+GR +N
Sbjct: 105 QLELIGHSIFDFIHPCDHEELQDALTPRQSLSKKRPEAPTERCLSLRMKSTLTSRGRTLN 164
Query: 57 VKAATYK--------------------VIHCTGHLVQNQTPAS---NGSTLMEPQDNIEN 93
+KAAT+K V+HC+GH+ + PA GS +EP
Sbjct: 165 LKAATWKSPWGAPSIIVVHHHHPSPCQVLHCSGHMRAYECPAQPSPAGSPHLEP------ 218
Query: 94 QSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFL 152
P HC V I E IPHP + + PL + FL
Sbjct: 219 --------------------------------PLHCLVLICEAIPHPGSLEPPLGRGAFL 246
Query: 153 TKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
+ HSLDMKFTY DE + D G++PD I S +++ HA DS
Sbjct: 247 SLHSLDMKFTYCDERIADVAGYSPDDLIGCSAYEYIHALDS 287
>gi|10432601|dbj|BAB13819.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 41/181 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 52 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 111
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV++C+GH+ + PA GS DSEP
Sbjct: 112 LKAATWKVLNCSGHMRAYKPPAQTSPA-----------------GS-----PDSEP---- 145
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFN 175
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++
Sbjct: 146 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRVAEVAGYS 196
Query: 176 P 176
P
Sbjct: 197 P 197
>gi|318037285|ref|NP_001187141.1| hypoxia induced factor-like factor [Ictalurus punctatus]
gi|73426664|gb|AAZ75953.1| hypoxia induced factor-like factor [Ictalurus punctatus]
Length = 627
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 48/205 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----HTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+GQS+YE HPCD E++ +L+ D + + F+RLK TLTS+G+ VN
Sbjct: 121 QLELLGQSVYEYVHPCDQEELRDLLTTKPGLFKKKCDSCTECNFFLRLKSTLTSRGKTVN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+K+AT+KV+HCTG R + Q+ + S P V
Sbjct: 181 IKSATWKVVHCTG-----------------------------RMKTLNQEGEGSSP---V 208
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G + EPIPHP+ + PL S TFLT+H++D+ F D + + +G++
Sbjct: 209 GSY----------MTLLCEPIPHPSCVEFPLDSSTFLTRHNMDLHFIQCDGRVTELVGYH 258
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAF 200
P+ I +S +DF HA D H+ +
Sbjct: 259 PNDLIGRSAYDFIHALDFDHLTRSL 283
>gi|290760626|gb|ADD59898.1| hypoxia-inducible factor 3 alpha [Mustelus canis]
Length = 468
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 52/207 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRS-------VFIRLKCTLTSKGRN 54
+++L+GQ +Y+ HPCD E++ +L+ + +RS F+RLK TLTS+G+
Sbjct: 123 QLELLGQCVYDYVHPCDQEELRDLLTTK--PGLFKKRSESCTECNFFLRLKSTLTSRGKT 180
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
VN+K+AT+KVIHCTG++ TL N E ++ +
Sbjct: 181 VNIKSATWKVIHCTGYM----------KTL-----NQEGEASS----------------- 208
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
+GE + + EPIPHP+ + PL S TFLT+H++D+ F+ D + + +G
Sbjct: 209 -LGESYMTL---------LCEPIPHPSCVEFPLDSSTFLTRHTMDLHFSQCDGRVTELVG 258
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAF 200
++P+ I +S +DF HA D H+ +
Sbjct: 259 YHPNDLIGRSAYDFFHALDFDHLTRSL 285
>gi|148372331|gb|ABQ63087.1| hypoxia-inducible factor-1alpha [Callinectes sapidus]
Length = 497
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 98/200 (49%), Gaps = 53/200 (26%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYK 63
++MG S+Y T+ DHSEV+ + S + R F+ LKCTLTSKGR+VN K AT K
Sbjct: 109 EVMGSSLYHYTNMVDHSEVEQLTSFKNPHQ---PRRAFLCLKCTLTSKGRSVNFKNATDK 165
Query: 64 VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVV 123
V+ G E VGE+
Sbjct: 166 VVQVIG--------------------------------------------EVVGERAD-- 179
Query: 124 TEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
A+ P+PHP+N + PL QTF+++HSLDMKFTY D ++F G+ + + +
Sbjct: 180 ---KAWLAALAIPVPHPSNIEFPLDKQTFVSRHSLDMKFTYVDSNAKEFCGYLSEELVGR 236
Query: 183 SVFDFHHAQDSFHIQNAFKN 202
SV++ HHA D+ IQ+A+KN
Sbjct: 237 SVYELHHALDTNLIQDAYKN 256
>gi|395751416|ref|XP_002829487.2| PREDICTED: hypoxia-inducible factor 3-alpha-like, partial [Pongo
abelii]
Length = 256
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 41/171 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+KAAT+KV+HC+GH+ + PA GS DSEP
Sbjct: 181 LKAATWKVLHCSGHMRAYKPPAQTSPA-----------------GS-----PDSEP---- 214
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADE 166
P C V I E IPHP + + PL + FL++HSLDMKFTY D+
Sbjct: 215 ---------PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDD 256
>gi|338710541|ref|XP_001500830.3| PREDICTED: hypoxia-inducible factor 3-alpha [Equus caballus]
Length = 588
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 83/161 (51%), Gaps = 42/161 (26%)
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASN---GSTLMEPQDNIEN 93
+R +R+K TLTS+GR +N+KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 81 ERCFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQTSPAGSPTLEP------ 134
Query: 94 QSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFL 152
P C V I E IPHP + + PL + FL
Sbjct: 135 --------------------------------PLQCLVLICEAIPHPGSLEPPLGRGAFL 162
Query: 153 TKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
++HSLDMKFTY DE + + G++PD I S +++ HA DS
Sbjct: 163 SRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDS 203
>gi|312385360|gb|EFR29882.1| hypothetical protein AND_00865 [Anopheles darlingi]
Length = 274
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 62/179 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH---TEDIRA----------QRSVFIRLKCTL 48
++D+MGQ I+E +H CDH E++ L+ H +E + R F+RLKCTL
Sbjct: 143 QIDIMGQPIWEYSHQCDHDELREALNGRHHSPSELLNGVANSECRPLENRDFFLRLKCTL 202
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
TS+GR+VN+++A+YKV+H TGH+ A +DK+
Sbjct: 203 TSRGRSVNIRSASYKVLHVTGHI-------------------------------ACKDKE 231
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
G+++ V+I P+PHPAN +VPL S TFL+KH+L MKF+Y D+
Sbjct: 232 --------GQRQ---------LVSIARPLPHPANIEVPLGSSTFLSKHTLGMKFSYVDD 273
>gi|195395058|ref|XP_002056153.1| GJ10784 [Drosophila virilis]
gi|194142862|gb|EDW59265.1| GJ10784 [Drosophila virilis]
Length = 323
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 96/216 (44%), Gaps = 64/216 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS------ANHTEDIRA--------QRSVFIRLKCT 47
K+D +GQ I+E TH CDH+E+K L+ A+ +D + R +F+R+KCT
Sbjct: 143 KIDTLGQQIWEYTHQCDHAEIKEALNLKRNGIADKIKDEQLIESGVSTHHRDLFVRMKCT 202
Query: 48 LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDK 107
LT R G +I K
Sbjct: 203 LT-------------------------------------------------RSGRSINIK 213
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
S + RV ++ +AIG PIPHP+N ++PL + TFLTKHSLDMKFTY D+
Sbjct: 214 SASYKVIHITGHLRVNSKGERVLIAIGRPIPHPSNIEIPLGTSTFLTKHSLDMKFTYVDD 273
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
M LG+ P + S+FD H DS + FK+
Sbjct: 274 KMLALLGYLPGDLLETSLFDCQHGADSERLMATFKS 309
>gi|313763044|gb|ADR80213.1| hypoxia-inducible factor 1 alpha [Labeo rohita]
Length = 194
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 44/159 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 74 QFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 133
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HCTGH+ VQ S S EP
Sbjct: 134 KSATWKVLHCTGHVRVQEHGEGSGDSGFKEP----------------------------- 164
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTK 154
P V I EPIPHP+N +VPL +TFL++
Sbjct: 165 ---------PLTYLVLICEPIPHPSNIEVPLDGKTFLSR 194
>gi|345321299|ref|XP_003430407.1| PREDICTED: hypoxia-inducible factor 3-alpha-like, partial
[Ornithorhynchus anatinus]
Length = 144
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 36/161 (22%)
Query: 34 IRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIEN 93
+ +RS +R+K TLTS+GR +N+KAAT+KV+HCTGH+ P G P+
Sbjct: 16 LATERSFSLRMKSTLTSRGRTLNLKAATWKVLHCTGHMRAYAAPPDPG-----PEGGAPG 70
Query: 94 QSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFL 152
+ P C V I E IPHP + PL + FL
Sbjct: 71 E------------------------------PPLRCLVLICEAIPHPGALEPPLGRGAFL 100
Query: 153 TKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
++HSLDMKFT+ DE + + G+ PD I S F++ HA DS
Sbjct: 101 SRHSLDMKFTFCDERIVEVAGYTPDDLIGCSAFEYIHALDS 141
>gi|156397887|ref|XP_001637921.1| predicted protein [Nematostella vectensis]
gi|156225037|gb|EDO45858.1| predicted protein [Nematostella vectensis]
Length = 340
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 43/203 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN--HTEDIRAQRSVFIRLKCTLTSKGRNVNVKA 59
++++ G S+Y+ HPCDH E+ + L A + +S F+R+K TLTS+G+NVN++A
Sbjct: 127 QIEVTGNSLYKYVHPCDHEELANQLGAGSKRVDSSDHYKSFFLRMKSTLTSRGKNVNLRA 186
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
+TY+V+HCTG + + I +K+ E + +
Sbjct: 187 STYRVVHCTGSM----------------------------KYKTIINKEGQEQKVPL--- 215
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDI 178
VAI P+ ++VPL + TF ++H LDMKF D+ + LG+ +
Sbjct: 216 ---------FLVAIAVPLMFATTFEVPLDRGTFTSRHMLDMKFLQCDDRVSSLLGYTREE 266
Query: 179 FIAKSVFDFHHAQDSFHIQNAFK 201
I KS + FHHA D ++ N K
Sbjct: 267 MIGKSWYSFHHAADLDNVLNTHK 289
>gi|118343818|ref|NP_001071731.1| transcription factor protein [Ciona intestinalis]
gi|70569828|dbj|BAE06484.1| transcription factor protein [Ciona intestinalis]
Length = 735
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 50/200 (25%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATY 62
+DL+ Q+I TH DH ++++ + + +R +S F+R+K TLT G+ N+K+A+Y
Sbjct: 148 LDLIVQNILSYTHEGDHDDIRNCFRESEGKSLR--KSFFLRMKSTLTPNGKTTNLKSASY 205
Query: 63 KVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRV 122
KV+ CTG + +Q QSD +
Sbjct: 206 KVLRCTGMITPSQA-----------------QSDTS------------------------ 224
Query: 123 VTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIA 181
FVA +PIPHP+N L S+TFL++HS DMKFTY DE M + L ++ + +
Sbjct: 225 ------AFVAHVQPIPHPSNIQHVLDSRTFLSRHSPDMKFTYWDERMSEILDYDAEGLMG 278
Query: 182 KSVFDFHHAQDSFHIQNAFK 201
KS +D+ H D+ I N+F+
Sbjct: 279 KSFYDYVHVMDAKAIANSFQ 298
>gi|297374832|ref|NP_001165655.1| hypoxia-inducible factor 1-alpha [Xenopus laevis]
gi|32469782|sp|Q9I8A9.1|HIF1A_XENLA RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|8953675|emb|CAB96628.1| hypoxia inducible factor 1 alpha [Xenopus laevis]
Length = 805
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 54/207 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----------ANHTEDIRAQRSVFIRLKCTLTS 50
+ +L G S+++ THPCDH E++ +L+ NH E ++I
Sbjct: 124 QFELTGHSVFDFTHPCDHEELREMLTFRNGPAKKRKRTNHREKFLPSYEMYI-------- 175
Query: 51 KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
N + K YKV H G +L I + ++N
Sbjct: 176 ---NQSWKNREYKVSHM------------EGPSLYRTHACIYDNANN------------- 207
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME 169
+ G K+ P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE +
Sbjct: 208 --QNHCGYKK----PPMTCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVT 261
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ +G+ PD + +SV++++HA DS H+
Sbjct: 262 ELVGYEPDELLGRSVYEYYHALDSDHL 288
>gi|338235747|gb|AEI91315.1| hypoxia inducible factor alpha 1 [Cirrhinus mrigala]
Length = 168
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 76/151 (50%), Gaps = 43/151 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+
Sbjct: 56 QFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNI 115
Query: 58 KAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
K+AT+KV+HC GH+ VQ S S EP
Sbjct: 116 KSATWKVLHCAGHVRVQEHGEGSGDSGFKEP----------------------------- 146
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL 147
P V I EPIPHP+N +VPL
Sbjct: 147 ---------PLTYLVLICEPIPHPSNIEVPL 168
>gi|321453024|gb|EFX64305.1| hypothetical protein DAPPUDRAFT_13455 [Daphnia pulex]
Length = 323
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 44/203 (21%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRN-VNVKA 59
+++DL+GQS Y+ HPCDH E++ +L+ D RS +R K L +K R+ +N K
Sbjct: 110 LQMDLIGQSFYDYCHPCDHDELREMLALRPDGD--PARSFCLRFKSALMAKKRSKINPKF 167
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
YKV G ++ T L+ N
Sbjct: 168 VPYKVY---GQMLDTTTTNCILIALLSSSTN----------------------------- 195
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDI 178
H V I +PIPHP+ PL +FLTKH+LDMK+TY DE + FLG+ P+
Sbjct: 196 --------HFLVLIVDPIPHPSCTKTPLGGYSFLTKHTLDMKYTYVDEKIYTFLGYTPED 247
Query: 179 FIAKSVFDFHHAQDSFHIQNAFK 201
+S ++ HHAQD+ + +K
Sbjct: 248 LKGRSAYELHHAQDNETVLKNYK 270
>gi|169591451|gb|ACA58053.1| hypoxia-inducible factor-1 alpha, partial [Thunnus orientalis]
Length = 226
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 42/160 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+ DL G S+++ THPCD E++ +L + T++ +RS F+R+KCTLTS+GR VNV
Sbjct: 104 QFDLTGHSVFDFTHPCDQEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNV 163
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
K+AT+KV+HC+GH + D+ Q+ N + EP
Sbjct: 164 KSATWKVLHCSGH--------------VRLYDSHTEQTPNGHK----------EP----- 194
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHS 156
P V I +PIPHP+N +VPL ++TFL++H+
Sbjct: 195 --------PVPYLVLICDPIPHPSNIEVPLDTKTFLSRHT 226
>gi|432923895|ref|XP_004080505.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Oryzias latipes]
Length = 353
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 52/205 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRA--QRSVFIRLKCTLTSKGRNVNVKA 59
+ +LMG +I+E +HPCDH E++ L ED+ +R +R+K TLT +GR+ NVK+
Sbjct: 144 QTELMGHNIFEYSHPCDHEEIRHNLRLT-AEDVWCSQKRDFVMRIKSTLTHRGRSANVKS 202
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
AT+KV+HC G K
Sbjct: 203 ATWKVLHCQGR-----------------------------------------------AK 215
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
+ + + C + P+ P ++ + + TF ++HS+DM+FTY D+ + LG+ P+
Sbjct: 216 VCMASSAASCLLLTCRPL--PLSHTLLSTHTFTSQHSMDMRFTYCDQRVASLLGYRPNEL 273
Query: 180 IAKSVFDFHHAQDSFHIQNAFKNPC 204
+ +S++D H D+ + N C
Sbjct: 274 LGRSIYDLCHTLDTNCLNKNHLNLC 298
>gi|348508776|ref|XP_003441929.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Oreochromis niloticus]
Length = 361
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 50/204 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFI-RLKCTLTSKGRNVNVKAA 60
+ +LMG +I+E THPCDH E++S L E ++ F+ R+K LT +GR N+K+A
Sbjct: 147 QTELMGHNIFEYTHPCDHEEIRSNLRLTAEEVWYGEKRDFVMRIKSALTHRGRTANLKSA 206
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
T+KV+HC G +
Sbjct: 207 TWKVLHCQG-------------------------------------------------RA 217
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
+V PS + P P ++ + TF ++HS+DM+FTY D+ + LG+ P+ +
Sbjct: 218 KVCVNPSAVSCLLLTCRPLPLSHTLLSRYTFTSQHSMDMRFTYCDQRVTSLLGYRPEELL 277
Query: 181 AKSVFDFHHAQDSFHIQNAFKNPC 204
+S++D H D+ + N C
Sbjct: 278 GRSIYDLCHTLDTSCLNKNHLNLC 301
>gi|317419554|emb|CBN81591.1| Endothelial PAS domain-containing protein [Dicentrarchus labrax]
Length = 361
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 50/204 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-AQRSVFIRLKCTLTSKGRNVNVKAA 60
+ +LMG +I+E THP DH E++S L E A+R +R+K LT +GR+ N+K+A
Sbjct: 147 QTELMGHNIFEFTHPGDHDEIRSNLRLTAEEIWWGAKRDFVLRIKSALTHRGRSANLKSA 206
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
T+KV+HC G TP+S
Sbjct: 207 TWKVLHCQGRAKVCLTPSS----------------------------------------- 225
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
C V +P+ P ++ + TF ++HS+DMKFTY D+ + LG+ P+ +
Sbjct: 226 ------VSCLVLTCQPL--PLSHMLLSIHTFTSQHSMDMKFTYCDQRVTSLLGYRPEELL 277
Query: 181 AKSVFDFHHAQDSFHIQNAFKNPC 204
+S+++ H D+ + N C
Sbjct: 278 GRSIYNLCHTLDTKCLTKNHLNLC 301
>gi|198420580|ref|XP_002119436.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 641
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 44/204 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA----NHT-EDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SIYE HP DH E+K++L+A NH + A+R F R+KC L RN
Sbjct: 117 QVELTGNSIYEYIHPGDHDEMKAVLTAHQPYNHLCPEYEAERCFFTRMKCVLAK--RNAG 174
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+ + YKVIHCTG++ + + + +Q D + G V
Sbjct: 175 LTSGGYKVIHCTGYI--------------KIRYFMFDQYDGSGGGCY----------HNV 210
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G +A+G+ +P + DV L S F+ + SLD K + D+ + LGF
Sbjct: 211 G------------VLALGQSLPATSLTDVKLYSNMFMFRASLDFKLIFMDQQVSSLLGFE 258
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ + HA D FH++ +
Sbjct: 259 PQDLIEKTLYHYVHAGDLFHLKES 282
>gi|297265931|ref|XP_001112947.2| PREDICTED: endothelial PAS domain-containing protein 1 isoform 3
[Macaca mulatta]
Length = 832
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 67/205 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+V+L G SI++ THPCDH E++ E++ + + L C
Sbjct: 121 QVELTGHSIFDFTHPCDHEEIR--------ENLSLKNGI---LNC--------------- 154
Query: 62 YKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
V+HCTG + V N P N G K
Sbjct: 155 --VLHCTGQVKVYNNCPPHNSL---------------------------------CGYKE 179
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
+++ C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+
Sbjct: 180 PLLS----CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEEL 235
Query: 180 IAKSVFDFHHAQDSFHIQNAFKNPC 204
+ +S ++F+HA DS ++ + +N C
Sbjct: 236 LGRSAYEFYHALDSENMTKSHQNLC 260
>gi|107051811|gb|ABF83561.1| hypoxia-inducible factor alpha [Metacarcinus magister]
Length = 1047
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 53/200 (26%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYK 63
++MG +Y T+ DHSEV+ + S ++ R F+R KCTL
Sbjct: 139 EVMGSYLYHYTNMVDHSEVEQLTSF---KNPHQPRRAFLRFKCTL--------------- 180
Query: 64 VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVV 123
T +G ++ K+ ++ +V +
Sbjct: 181 ----------------------------------TSKGRSVNFKNATDKVVQVVGEVVGE 206
Query: 124 TEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
VA+ P+PHP+N + PL QTF++KHSLDMKFTY D +++F G+ + + +
Sbjct: 207 RADKAWLVALAIPVPHPSNIEFPLDKQTFVSKHSLDMKFTYVDSNVKEFCGYTSEDLVGR 266
Query: 183 SVFDFHHAQDSFHIQNAFKN 202
SV+D HHA D+ IQ+A+KN
Sbjct: 267 SVYDMHHALDTSLIQDAYKN 286
>gi|260835180|ref|XP_002612587.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
gi|229297965|gb|EEN68596.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
Length = 333
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 47/203 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HTE---DIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ +IL+ + HT D +RS FIRLKC L RN
Sbjct: 117 QVELTGNSIYEYIHPADHEEMAAILTVHQPIHTHIMTDFELERSFFIRLKCVLAK--RNA 174
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q M P + +
Sbjct: 175 GLTCGGYKVIHCSGYLKIKQYTMD-----MAPYEGC---------------------YQN 208
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
+G VA+G +P A ++ L S F+ + SLD+K + D + G+
Sbjct: 209 IG------------LVAVGHSLPPSAITEIKLYSNMFMFRASLDLKLIFLDAKVAQLTGY 256
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQ 197
P I K+++ + H D FH++
Sbjct: 257 EPQDLIEKTLYHYVHGSDIFHLR 279
>gi|431838120|gb|ELK00052.1| Single-minded like protein 1 [Pteropus alecto]
Length = 355
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|55730495|emb|CAH91969.1| hypothetical protein [Pongo abelii]
Length = 576
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|395851422|ref|XP_003798255.1| PREDICTED: single-minded homolog 1 [Otolemur garnettii]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|327261480|ref|XP_003215558.1| PREDICTED: single-minded homolog 1-like [Anolis carolinensis]
Length = 769
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYVHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H+ D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHSCDTFHLRCA 280
>gi|300794523|ref|NP_001179901.1| single-minded homolog 1 [Bos taurus]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|296484106|tpg|DAA26221.1| TPA: single-minded homolog 1 [Bos taurus]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|121484035|gb|ABM54340.1| EPAS1 [Pan paniscus]
gi|124001859|gb|ABM87876.1| EPAS1 [Papio hamadryas]
Length = 107
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 39/138 (28%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQD 89
++D+ +R F+R+KCT+T++GR VN+K+AT+KV+HCTG + V N P N
Sbjct: 7 SKDMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLHCTGQVKVYNNCPPHN--------- 57
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-S 148
G K +++ C + + EPI HP++ D+PL S
Sbjct: 58 ------------------------SLCGYKEPLLS----CLIIMCEPIQHPSHMDIPLDS 89
Query: 149 QTFLTKHSLDMKFTYADE 166
+TFL++HS+DMKFTY D+
Sbjct: 90 KTFLSRHSMDMKFTYCDD 107
>gi|125490345|ref|NP_001074957.1| single-minded homolog 1 [Pan troglodytes]
gi|146325729|sp|A2T6X9.1|SIM1_PANTR RecName: Full=Single-minded homolog 1
gi|124111115|gb|ABM91934.1| SIM1 [Pan troglodytes]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|297747308|ref|NP_001166056.2| single-minded homolog 1 [Sus scrofa]
gi|297655327|gb|ADC53306.2| single-minded 1 protein [Sus scrofa]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|410959734|ref|XP_003986456.1| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 1 [Felis
catus]
Length = 760
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|2245352|gb|AAB62395.1| hSIM1 [Homo sapiens]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|397507866|ref|XP_003824402.1| PREDICTED: single-minded homolog 1 [Pan paniscus]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|297678768|ref|XP_002817234.1| PREDICTED: single-minded homolog 1 [Pongo abelii]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|301773192|ref|XP_002922016.1| PREDICTED: single-minded homolog 1-like [Ailuropoda melanoleuca]
gi|281347050|gb|EFB22634.1| hypothetical protein PANDA_010941 [Ailuropoda melanoleuca]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|146325728|sp|A1YFY6.1|SIM1_PANPA RecName: Full=Single-minded homolog 1
gi|121483834|gb|ABM54211.1| SIM1 [Pan paniscus]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|332218557|ref|XP_003258422.1| PREDICTED: single-minded homolog 1 [Nomascus leucogenys]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|296198859|ref|XP_002746908.1| PREDICTED: single-minded homolog 1 [Callithrix jacchus]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|395534668|ref|XP_003769362.1| PREDICTED: single-minded homolog 1 [Sarcophilus harrisii]
Length = 765
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|126310365|ref|XP_001367899.1| PREDICTED: single-minded homolog 1 [Monodelphis domestica]
Length = 765
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|403261071|ref|XP_003922958.1| PREDICTED: single-minded homolog 1 [Saimiri boliviensis
boliviensis]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|355748775|gb|EHH53258.1| hypothetical protein EGM_13864 [Macaca fascicularis]
Length = 766
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|348560534|ref|XP_003466068.1| PREDICTED: single-minded homolog 1-like [Cavia porcellus]
Length = 767
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|440900235|gb|ELR51420.1| Single-minded-like protein 1 [Bos grunniens mutus]
Length = 766
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|73973608|ref|XP_539058.2| PREDICTED: single-minded homolog 1 isoform 1 [Canis lupus
familiaris]
Length = 766
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|149722832|ref|XP_001503954.1| PREDICTED: single-minded homolog 1 [Equus caballus]
Length = 766
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|21614542|ref|NP_005059.2| single-minded homolog 1 [Homo sapiens]
gi|426354083|ref|XP_004044499.1| PREDICTED: single-minded homolog 1 [Gorilla gorilla gorilla]
gi|109940166|sp|P81133.2|SIM1_HUMAN RecName: Full=Single-minded homolog 1; AltName: Full=Class E basic
helix-loop-helix protein 14; Short=bHLHe14
gi|108752102|gb|AAI11932.1| SIM1 protein [synthetic construct]
gi|110645561|gb|AAI18501.1| SIM1 protein [synthetic construct]
gi|119568836|gb|EAW48451.1| single-minded homolog 1 (Drosophila) [Homo sapiens]
gi|307684428|dbj|BAJ20254.1| single-minded homolog 1 [synthetic construct]
Length = 766
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|354504925|ref|XP_003514523.1| PREDICTED: single-minded homolog 1 [Cricetulus griseus]
gi|344258879|gb|EGW14983.1| Single-minded-like 1 [Cricetulus griseus]
Length = 765
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|355561927|gb|EHH18559.1| hypothetical protein EGK_15194 [Macaca mulatta]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|344264587|ref|XP_003404373.1| PREDICTED: single-minded homolog 1 [Loxodonta africana]
Length = 765
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|301605109|ref|XP_002932187.1| PREDICTED: single-minded homolog 1-like [Xenopus (Silurana)
tropicalis]
Length = 763
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|291396685|ref|XP_002714792.1| PREDICTED: single-minded homolog 1-like [Oryctolagus cuniculus]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|444725314|gb|ELW65884.1| Single-minded like protein 1 [Tupaia chinensis]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|224048380|ref|XP_002196673.1| PREDICTED: single-minded homolog 1 [Taeniopygia guttata]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|109072171|ref|XP_001086054.1| PREDICTED: single-minded homolog 1 [Macaca mulatta]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|402867751|ref|XP_003897999.1| PREDICTED: single-minded homolog 1 [Papio anubis]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|118088683|ref|XP_419817.2| PREDICTED: single-minded homolog 1 [Gallus gallus]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|153945860|ref|NP_035506.2| single-minded homolog 1 [Mus musculus]
gi|6175033|sp|Q61045.3|SIM1_MOUSE RecName: Full=Single-minded homolog 1; Short=mSIM1
gi|1651193|dbj|BAA11467.1| mSim1 [Mus musculus]
gi|3138809|dbj|BAA28270.1| mSim1 [Mus musculus]
gi|148673108|gb|EDL05055.1| single-minded homolog 1 (Drosophila) [Mus musculus]
gi|182887925|gb|AAI60194.1| Single-minded homolog 1 (Drosophila) [synthetic construct]
Length = 765
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|449271560|gb|EMC81866.1| Single-minded like protein 1 [Columba livia]
Length = 766
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|157821739|ref|NP_001101111.1| single-minded homolog 1 [Rattus norvegicus]
gi|149046904|gb|EDL99652.1| single-minded 1 (predicted) [Rattus norvegicus]
Length = 765
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|120974098|gb|ABM46638.1| SIM1 [Gorilla gorilla]
Length = 680
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 30 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 87
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 88 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 121
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 122 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 169
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 170 EPQDLIEKTLYHHVHGCDTFHLRCA 194
>gi|149640516|ref|XP_001506044.1| PREDICTED: single-minded homolog 1 [Ornithorhynchus anatinus]
Length = 764
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ + +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVHEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|227430297|ref|NP_001153057.1| single-minded homolog 1b [Danio rerio]
gi|226426422|gb|ACO54510.1| Sim1b long isoform [Danio rerio]
Length = 586
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS------ANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+ ++ ++ +RS F+R+KC L RN
Sbjct: 124 QVELTGNSIYEYVHPADHDEMAAVLTPQPSYHSHFVQEYEVERSFFLRMKCVLAK--RNA 181
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q S P D +
Sbjct: 182 GLTSGGYKVIHCSGYLKIRQF-----SLDASPFDGC---------------------YQN 215
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + D G+
Sbjct: 216 VG------------LVAVGHTLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVSDLTGY 263
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H DSFH++ A
Sbjct: 264 EPQDLIEKTLYHHVHCCDSFHLRCA 288
>gi|297471440|ref|XP_002685213.1| PREDICTED: single-minded homolog 2 [Bos taurus]
gi|296490868|tpg|DAA32981.1| TPA: single-minded homolog 2 long-like [Bos taurus]
Length = 805
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 47/206 (22%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRN 54
+KV+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 274 LKVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RN 331
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
+ + YKVIHC+G+L Q D + S Q
Sbjct: 332 AGLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI-------- 366
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G
Sbjct: 367 -VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTG 413
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ P I K+++ H D FH++ A
Sbjct: 414 YEPQDLIEKTLYHHVHGCDVFHLRYA 439
>gi|56800652|gb|AAW31092.1| SIMA, partial [Eurosta solidaginis]
Length = 238
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 14/86 (16%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILSA--NHTED------------IRAQRSVFIRLKCTL 48
VD++GQ I+E +H CDH+E+K L+ N T D R +F+RLKCTL
Sbjct: 136 VDILGQQIWEYSHQCDHAELKDALNIKRNSTNDQVKDENKIDYELTTDHRDLFVRLKCTL 195
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQN 74
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 196 TSRGRSINIKSASYKVIHITGHLVAN 221
>gi|348541611|ref|XP_003458280.1| PREDICTED: single-minded homolog 1-like [Oreochromis niloticus]
Length = 761
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+ + HT ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYVHPADHDEMTAVLTPHQPYHTHFVQEYEMERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q S M P + +
Sbjct: 174 GLTSGGYKVIHCSGYLKIRQY-----SLDMSPFEGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H+ D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHSCDIFHLRCA 280
>gi|410916801|ref|XP_003971875.1| PREDICTED: single-minded homolog 1-like [Takifugu rubripes]
Length = 760
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS------ANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+ ++ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYVHPADHDEMTAVLTPHQPYHSHFVQEYEMERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q S M P + +
Sbjct: 174 GLTSGGYKVIHCSGYLKIRQY-----SLDMSPFEGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDIFHLRCA 280
>gi|2952266|gb|AAC05481.1| single-minded protein 1 [Mus musculus]
Length = 765
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP D E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADLDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRCA 280
>gi|432945494|ref|XP_004083626.1| PREDICTED: single-minded homolog 1-like [Oryzias latipes]
Length = 711
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS------ANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+ ++ ++ +RS F+R+KC L RN
Sbjct: 69 QVELTGNSIYEYIHPADHDEMTAVLTPHQPFHSHFVQEYEVERSFFLRMKCVLAK--RNA 126
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q S M P + +
Sbjct: 127 GLTSGGYKVIHCSGYLKIRQY-----SLDMSPFEGC---------------------YQN 160
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 161 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 208
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H+ D FH++ A
Sbjct: 209 EPQDLIEKTLYHHVHSCDIFHLRCA 233
>gi|343055501|gb|AEL79592.1| hypoxia-inducible factor 1 alpha subunit [Ovis ammon]
Length = 452
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S++++
Sbjct: 1 CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEY 60
Query: 188 HHAQDSFHI 196
+HA DS H+
Sbjct: 61 YHALDSDHL 69
>gi|164600781|gb|ABY61821.1| hypoxia-inducible factor 1 alpha subunit [Ovis aries]
Length = 148
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 55/75 (73%), Gaps = 5/75 (6%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 54 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFVRMKCTLTSRGRTMN 113
Query: 57 VKAATYKVIHCTGHL 71
+K+AT+KV+HCTGH+
Sbjct: 114 IKSATWKVLHCTGHI 128
>gi|343055700|gb|AEL79602.1| hypoxia-inducible factor 1 alpha subunit [Ovis aries]
Length = 452
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S++++
Sbjct: 1 CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEY 60
Query: 188 HHAQDSFHI 196
+HA DS H+
Sbjct: 61 YHALDSDHL 69
>gi|40037197|gb|AAR37393.1| hypoxia-inducible factor 1 alpha [Ovis aries]
Length = 189
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 55/75 (73%), Gaps = 5/75 (6%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 95 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 154
Query: 57 VKAATYKVIHCTGHL 71
+K+AT+KV+HCTGH+
Sbjct: 155 IKSATWKVLHCTGHI 169
>gi|432939126|ref|XP_004082594.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oryzias latipes]
Length = 628
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 49/200 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRS----------VFI-RLKCTLTS 50
+ DL G ++++ THPCD E++ +L E + QR +F+ ++K ++
Sbjct: 125 QFDLTGHNVFDYTHPCDQEELREMLVYRTGELQQLQRKTNSCIPDIGEMFVSKIKESILL 184
Query: 51 KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
+V+HC+G + N A S
Sbjct: 185 SYTECVFTVLCLQVLHCSGRVHVNSVEAEQNSN--------------------------- 217
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME 169
G+K P V I +PIPHP+N +VPL ++TFL++H++DMKFTY DE +
Sbjct: 218 ------GQKE----PPVPYLVLICDPIPHPSNIEVPLDTKTFLSRHTMDMKFTYCDERIT 267
Query: 170 DFLGFNPDIFIAKSVFDFHH 189
+ +G++P+ + +SV++++H
Sbjct: 268 ELMGYDPEDLMNRSVYEYYH 287
>gi|325660539|gb|ADZ40237.1| HIF-1a [Sebastiscus marmoratus]
Length = 94
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 38/129 (29%)
Query: 39 SVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNT 98
S F+R+KCTLTS+GR VNVK+AT+KV+HC+GH
Sbjct: 1 SFFLRMKCTLTSRGRTVNVKSATWKVLHCSGH---------------------------- 32
Query: 99 RRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSL 157
++ D E G K P V I +PI HP+N +VPL ++TFL++H++
Sbjct: 33 -----VRVYDGHTEETSSGHKE----PPVPYLVLICDPIQHPSNIEVPLDTKTFLSRHTM 83
Query: 158 DMKFTYADE 166
DMKFTY DE
Sbjct: 84 DMKFTYRDE 92
>gi|30089690|ref|NP_835740.1| single-minded homolog 1-A [Danio rerio]
gi|82111460|sp|Q98SJ5.1|SIM1A_DANRE RecName: Full=Single-minded homolog 1-A
gi|13506717|gb|AAK27261.1| single-minded 1 [Danio rerio]
Length = 745
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 47/203 (23%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNVNV 57
+L G SIYE HP DH E+ ++L+A+ + +RS F+R+KC L N +
Sbjct: 118 ELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVHEYEMERSFFLRMKCVLAKA--NAGL 175
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
YKVIHC+G+L Q S M P D + VG
Sbjct: 176 TCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQNVG 209
Query: 118 EKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNP 176
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P
Sbjct: 210 ------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEP 257
Query: 177 DIFIAKSVFDFHHAQDSFHIQNA 199
I K+++ H+ D+FH++ A
Sbjct: 258 QDLIEKTLYHHVHSCDTFHLRCA 280
>gi|115920139|ref|XP_782984.2| PREDICTED: uncharacterized protein LOC577676 [Strongylocentrotus
purpuratus]
Length = 820
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HTE---DIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ HT D +R F+R+KC L RN
Sbjct: 115 QVELTGNSIYEYIHPADHDEMTALLTAHQPYHTHLLTDYELERQFFLRMKCVLAK--RNA 172
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC G+L Q + P D +
Sbjct: 173 GLTSGGYKVIHCHGYLKIKQYTMD-----IAPYDGC---------------------YQN 206
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VAIG +P + +V L + F+ + SLDMK + D + G+
Sbjct: 207 VG------------LVAIGHSLPPSSLTEVKLYNNMFMFRASLDMKLIFLDGKVAVLTGY 254
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ F H D HI+ A
Sbjct: 255 EPQDLIEKTIYHFVHPMDIMHIRYA 279
>gi|281338859|gb|EFB14443.1| hypothetical protein PANDA_005294 [Ailuropoda melanoleuca]
Length = 525
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|431901494|gb|ELK08516.1| Single-minded like protein 2 [Pteropus alecto]
Length = 633
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|394987313|gb|AFN42887.1| hypoxia inducible factor 1 alpha subunit protein, partial [Cavia
porcellus]
Length = 99
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S++++
Sbjct: 1 CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEY 60
Query: 188 HHAQDSFHI 196
+HA DS H+
Sbjct: 61 YHALDSDHL 69
>gi|345795277|ref|XP_849519.2| PREDICTED: single-minded homolog 2 isoform 1 [Canis lupus
familiaris]
Length = 559
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|354491783|ref|XP_003508034.1| PREDICTED: single-minded homolog 2 [Cricetulus griseus]
gi|344256479|gb|EGW12583.1| Single-minded-like 2 [Cricetulus griseus]
Length = 538
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDVSLYDSCFQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRYA 280
>gi|395856625|ref|XP_003800723.1| PREDICTED: single-minded homolog 2 [Otolemur garnettii]
Length = 614
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEMERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|449283789|gb|EMC90383.1| Single-minded like protein 2 [Columba livia]
Length = 677
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|118083884|ref|XP_416724.2| PREDICTED: single-minded homolog 2 [Gallus gallus]
Length = 764
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|194226235|ref|XP_001916348.1| PREDICTED: single-minded homolog 2 [Equus caballus]
Length = 488
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|224042489|ref|XP_002189239.1| PREDICTED: single-minded homolog 2 [Taeniopygia guttata]
Length = 766
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 122 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 179
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 180 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 213
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 214 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 261
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 262 EPQDLIEKTLYHHVHGCDVFHLRYA 286
>gi|440892235|gb|ELR45515.1| Single-minded-like protein 2, partial [Bos grunniens mutus]
Length = 538
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|426226414|ref|XP_004007338.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1 [Ovis aries]
Length = 853
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%), Gaps = 7/77 (9%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 139 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 198
Query: 55 VNVKAATYKVIHCTGHL 71
VN+K+AT+KV+HCTG +
Sbjct: 199 VNLKSATWKVLHCTGQV 215
>gi|259013382|ref|NP_001158398.1| single-minded homolog 1 [Saccoglossus kowalevskii]
gi|90659999|gb|ABD97275.1| single-minded [Saccoglossus kowalevskii]
Length = 783
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HTE---DIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+ + HT D +RS F+R+KC L RN
Sbjct: 117 QVELTGNSIYEYIHPADHDEMTALLTVHQQYHTHVITDFEIERSFFLRMKCVLAK--RNA 174
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q + P D +
Sbjct: 175 GLTSGGYKVIHCSGYLKIKQYTMD-----IAPFDGC---------------------YQN 208
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
+G VAIG +P + ++ + S F+ + SLD+K + D + G+
Sbjct: 209 IG------------LVAIGHSLPPNSITEIKMHSNMFMFRASLDLKLIFLDARVAALTGY 256
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ F H D HI+ A
Sbjct: 257 EPQDLIEKTLYHFVHGMDILHIRYA 281
>gi|332229288|ref|XP_003263823.1| PREDICTED: single-minded homolog 2 [Nomascus leucogenys]
Length = 538
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|410970001|ref|XP_003991479.1| PREDICTED: single-minded homolog 2 [Felis catus]
Length = 548
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDVSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|350592162|ref|XP_003358999.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2-like [Sus
scrofa]
Length = 626
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 70 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 127
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 128 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 161
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 162 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 209
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 210 EPQDLIEKTLYHHVHGCDVFHLRYA 234
>gi|443702124|gb|ELU00285.1| hypothetical protein CAPTEDRAFT_165634, partial [Capitella teleta]
Length = 487
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 48/204 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SIYE HP DH E+ ++L+ +D +RS F+R+KC L RN
Sbjct: 114 QVELTGNSIYEYIHPADHDEMTALLTVQQHLGHPHLLQDYEIERSFFLRMKCVLAK--RN 171
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
+ + YKVIHC+G+L Q M P + +
Sbjct: 172 AGLCSGGYKVIHCSGYLKVRQYTVD-----MAPFEGC---------------------YQ 205
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
VG VA+G +P A +V L S F+ + SLD+K + D + G
Sbjct: 206 NVG------------LVALGHSLPSSAVTEVKLYSSMFMFRASLDLKLIFLDARVAQLTG 253
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQ 197
+ P I K+++ + HA D H++
Sbjct: 254 YEPQDLIEKTLYHYIHACDILHMR 277
>gi|194239684|ref|NP_033664.2| single-minded homolog 2 short isoform [Homo sapiens]
gi|83405489|gb|AAI10445.1| Single-minded homolog 2 (Drosophila) [Homo sapiens]
gi|119630142|gb|EAX09737.1| single-minded homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 570
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|2062419|gb|AAB62397.1| transcription factor SIM2 short form [Homo sapiens]
Length = 570
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|397507000|ref|XP_003824000.1| PREDICTED: single-minded homolog 2 [Pan paniscus]
Length = 570
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|308197282|gb|ADO17753.1| single-minded protein [Parhyale hawaiensis]
Length = 597
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 56/213 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS--------ANHT-----EDIRAQRSVFIRLKCTL 48
+V+L G SIYE HP DH E+ S+LS A H +D A+R+ IR+KC L
Sbjct: 97 QVELTGNSIYEYIHPADHDEMLSVLSLPPHYQHLARHPQHYARQDEEAERTFLIRMKCVL 156
Query: 49 TSKGRNVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDK 107
RN + YKVIHC+G+L +++ T M P D+
Sbjct: 157 AK--RNAGLTTGGYKVIHCSGYLKIKHYT------MDMAPYDSC---------------- 192
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
+ VG VA+G +P A ++ + S F+ + SLD++ + D
Sbjct: 193 -----YQNVG------------LVAVGHSLPPSAITEIKMHSNMFMFRASLDLRLIFLDA 235
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ D G+ P I K+++ + H D H++ A
Sbjct: 236 RVTDLTGYQPQDLIEKTLYQYVHGCDLMHVRGA 268
>gi|109065407|ref|XP_001085660.1| PREDICTED: single-minded homolog 2 [Macaca mulatta]
Length = 634
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|355747376|gb|EHH51873.1| Class E basic helix-loop-helix protein 15, partial [Macaca
fascicularis]
Length = 525
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|355560292|gb|EHH16978.1| Class E basic helix-loop-helix protein 15, partial [Macaca mulatta]
Length = 525
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|326913304|ref|XP_003202979.1| PREDICTED: single-minded homolog 2-like [Meleagris gallopavo]
Length = 747
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 123 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 180
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 181 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 214
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 215 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 262
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 263 EPQDLIEKTLYHHVHGCDVFHLRYA 287
>gi|358422363|ref|XP_003585341.1| PREDICTED: single-minded homolog 2, partial [Bos taurus]
Length = 303
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 47/204 (23%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNVN 56
V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 1 VELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNAG 58
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+ + YKVIHC+G+L Q D + S Q V
Sbjct: 59 LTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI---------V 92
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 93 G------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYE 140
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 141 PQDLIEKTLYHHVHGCDVFHLRYA 164
>gi|389615077|dbj|BAM20533.1| hypoxia-inducible factor, partial [Papilio polytes]
Length = 211
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 54/71 (76%), Gaps = 5/71 (7%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++++MGQS++E++HPCDH E++ L +R + +RLKCTLT KGR+V++K+A+
Sbjct: 136 QMEIMGQSVFELSHPCDHEEMREALRXGA-----GRRDMLLRLKCTLTXKGRSVHLKSAS 190
Query: 62 YKVIHCTGHLV 72
YKVIH TGH++
Sbjct: 191 YKVIHLTGHML 201
>gi|2969893|emb|CAA05055.1| human SIM2 [Homo sapiens]
Length = 463
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 53 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 110
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 111 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 144
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 145 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 192
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 193 EPQDLIEKTLYHHVHGCDVFHLRYA 217
>gi|403271535|ref|XP_003927678.1| PREDICTED: single-minded homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403271537|ref|XP_003927679.1| PREDICTED: single-minded homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 563
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMALYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|147904258|ref|NP_001079101.1| single-minded homolog 2 [Xenopus laevis]
gi|11993330|gb|AAG42690.1| single-minded [Xenopus laevis]
Length = 760
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDISLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|348534841|ref|XP_003454910.1| PREDICTED: single-minded homolog 1-A-like [Oreochromis niloticus]
Length = 754
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMIAVLTAHQPYHSHFVQEYEMERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
+G VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 208 IG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVSELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H+ D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHSCDCFHLRCA 280
>gi|327268553|ref|XP_003219061.1| PREDICTED: single-minded homolog 2-like [Anolis carolinensis]
Length = 764
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + + Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDTCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|78145949|gb|ABB22767.1| endothelial PAS domain protein 1, partial [Chanos chanos]
Length = 131
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS ++ +R F+R+KCT+T++GR VN
Sbjct: 45 QVELTGHSIFDFTHPCDHDEIRENLSLKSGLGKKGRELSTERDFFMRMKCTVTNRGRTVN 104
Query: 57 VKAATYKVIHCTGHL 71
+K+A++KV+HCTGHL
Sbjct: 105 LKSASWKVLHCTGHL 119
>gi|194663812|ref|XP_001789154.1| PREDICTED: single-minded homolog 2 [Bos taurus]
Length = 660
Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|410931985|ref|XP_003979375.1| PREDICTED: single-minded homolog 2-like [Takifugu rubripes]
Length = 694
Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS----ANH--TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SI+E HP DH E+ ++LS A H T++ A+RS F+R+KC L RN
Sbjct: 116 QVELTGNSIFEYIHPSDHDEMTAVLSLCQPAQHHVTQEYEAERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q TL D S Q
Sbjct: 174 GLTCGGYKVIHCSGYLKVRQC------TL-----------DLALYESCYQ---------T 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P ++ L S F+ + SLD K + D + + GF
Sbjct: 208 VG------------LVAVGHSLPPSGVTEIKLFSNMFMFRASLDFKLIFLDTRVAELTGF 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ HA D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHACDIFHLRYA 280
>gi|380039562|gb|AFD32325.1| hypoxia-inducible factor 1 alpha, partial [Huso huso]
Length = 134
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
G K R +T V I +PIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+
Sbjct: 2 GYKERPMTS----MVLICDPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYQ 57
Query: 176 PDIFIAKSVFDFHHAQDSFHI 196
P+ + +SV++++HA DS H+
Sbjct: 58 PEDLLGRSVYEYYHALDSDHL 78
>gi|426234631|ref|XP_004011296.1| PREDICTED: single-minded homolog 1 [Ovis aries]
Length = 769
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L + +
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGL 175
Query: 56 NVKAATYK-VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
+ T + VIHC+G+L Q S M P D +
Sbjct: 176 TLLFGTGRSVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQ 209
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
VG VA+G +P A ++ L S F+ + SLDMK + D + + G
Sbjct: 210 NVG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTG 257
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ P I K+++ H D+FH++ A
Sbjct: 258 YEPQDLIEKTLYHHVHGCDTFHLRCA 283
>gi|345326320|ref|XP_001512322.2| PREDICTED: single-minded homolog 2-like [Ornithorhynchus anatinus]
Length = 849
Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 180 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 237
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 238 GLTCSGYKVIHCSGYLKIRQY-----------------MLDVSLYDSCYQI--------- 271
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 272 VG------------LVAVGQSLPPSAVTEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 319
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+F+++ A
Sbjct: 320 EPQDLIEKTLYHHVHGCDAFYLRYA 344
>gi|126325353|ref|XP_001374323.1| PREDICTED: single-minded homolog 2 [Monodelphis domestica]
Length = 761
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQF-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D F+++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDMFYLRYA 280
>gi|301624571|ref|XP_002941575.1| PREDICTED: single-minded homolog 2-like [Xenopus (Silurana)
tropicalis]
Length = 760
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 47/203 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDISLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQ 197
P I K+++ H D FH++
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLR 278
>gi|348556425|ref|XP_003464022.1| PREDICTED: single-minded homolog 2-like [Cavia porcellus]
Length = 662
Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRYA 280
>gi|395518589|ref|XP_003763442.1| PREDICTED: single-minded homolog 2 [Sarcophilus harrisii]
Length = 764
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D F+++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDMFYLRYA 280
>gi|143347245|gb|ABO93219.1| Sim [Platynereis dumerilii]
Length = 224
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 52/210 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----------ANHTEDIRAQRSVFIRLKCTLTS 50
+V+L G SIYE HP DH E+ ++L+ N ++ +RS F+R+KC L
Sbjct: 23 QVELTGNSIYEYIHPADHDEMTALLTVHQPYHSHMLQGNMPQEYELERSFFLRMKCVLAK 82
Query: 51 KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
RN + + YKVIHC+G+L Q M P D
Sbjct: 83 --RNAGLTSGGYKVIHCSGYLKIKQFTMD-----MAPFDGC------------------- 116
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME 169
+ VG VA+G +P A ++ + S F+ + SLD+K + D +
Sbjct: 117 --YQNVG------------MVAVGHSLPPSAITEIKMYSNMFMFRASLDLKLIFLDARVA 162
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
G+ P I K+++ + HA D H++ A
Sbjct: 163 QVTGYEPQDIIEKTLYHYIHACDILHMRYA 192
>gi|1213283|gb|AAA91202.1| SIM2 [Mus musculus]
Length = 742
Score = 82.8 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRYA 280
>gi|1213281|gb|AAA91201.1| SIM1 [Mus musculus]
Length = 695
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 48/205 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP D E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADLDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q S M P D +
Sbjct: 174 GL-CGGYKVIHCSGYLKIRQY-----SLDMSPFDGC---------------------YQN 206
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 207 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 254
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 255 EPQDLIEKTLYHHVHGCDTFHLRCA 279
>gi|345494448|ref|XP_001601655.2| PREDICTED: hypothetical protein LOC100117407 [Nasonia vitripennis]
Length = 815
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 39/210 (18%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA-----------NHTEDIRAQRSVFIRLKCTLTS 50
+V+L G SIYE H DH E+ S+LS N DI +R+ F+R+KC L
Sbjct: 258 QVELTGNSIYEYIHQYDHEEMASVLSGSCLPSGSLPQPNAQGDIEIERAFFLRMKCVLAK 317
Query: 51 KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
RN + +A +KVIHC+G+L G E
Sbjct: 318 --RNAGLTSAGFKVIHCSGYLKLKHVAVPGGPEYDESGGGGTAPVGGYEL---------- 365
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYADETME 169
VG VA+G +P AN ++ L F+ + SLD K + D +
Sbjct: 366 ---HNVG------------LVAVGHSLPPSANTEIKLHHNMFMFRASLDFKLVFLDANVP 410
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
G+ + K+++ + H D+ H+Q A
Sbjct: 411 QLTGYESQELVDKTLYHYVHVSDAVHLQQA 440
>gi|395752789|ref|XP_002830715.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2 [Pongo
abelii]
Length = 679
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|40037190|gb|AAR37392.1| hypoxia-inducible factor 1 alpha [Sus scrofa]
Length = 189
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+ +L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N
Sbjct: 95 QFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMN 154
Query: 57 VKAATYKVIHCTGHL 71
+K+AT+KV+ CTGH+
Sbjct: 155 IKSATWKVLPCTGHI 169
>gi|351698817|gb|EHB01736.1| Single-minded-like protein 2 [Heterocephalus glaber]
Length = 689
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 211 QVELTGNSIYEYIHPSDHDEMTTVLAAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 268
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 269 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 302
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 303 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 350
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+F ++ A
Sbjct: 351 EPQDLIEKTLYHHVHGCDTFQLRYA 375
>gi|189241710|ref|XP_967930.2| PREDICTED: similar to Single minded [Tribolium castaneum]
Length = 521
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 46/197 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----HTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SIYE HP DH E+ ++LS +D ++R+ F+R+KC L RN
Sbjct: 117 QVELTGNSIYEYIHPADHDEMTAVLSPTIPPLASQQDYESERAFFLRMKCVLAK--RNAG 174
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEV 116
+ YKVIHC+G+L Q AS S P E
Sbjct: 175 LTNGGYKVIHCSGYLKVKQFTAS------------------------------SSPYEGC 204
Query: 117 GEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFN 175
+ + VA+G +P A ++ L + F+ + SLD+K + D + G+
Sbjct: 205 YQNMGL--------VAVGHSLPPSAITEIKLHANMFMFRASLDLKLIFLDARVAQLTGYE 256
Query: 176 PDIFIAKSVFDFHHAQD 192
P I K+++ + H D
Sbjct: 257 PQDLIEKTLYHYIHGSD 273
>gi|122054003|gb|ABM66006.1| EPAS1 [Ateles geoffroyi]
Length = 77
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 7/75 (9%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR VN
Sbjct: 1 ELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRTVN 60
Query: 57 VKAATYKVIHCTGHL 71
+K+AT+KV+HCTG +
Sbjct: 61 LKSATWKVLHCTGQV 75
>gi|402862419|ref|XP_003895560.1| PREDICTED: single-minded homolog 2 [Papio anubis]
Length = 667
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|405978067|gb|EKC42482.1| Single-minded-like protein 1 [Crassostrea gigas]
Length = 701
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+++L G SI+E HP DH E+ ++L+ + T + +RS FIR+KC L RN
Sbjct: 114 QIELTGSSIFEYIHPSDHEEMTAVLTYSPTYSTSCLPEFEVERSFFIRMKCVLAK--RNA 171
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC G+L Q + M P + ++
Sbjct: 172 GLTSGGYKVIHCGGYLKIKQF-----NMEMSPYEGC---------------------QQN 205
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VAIG +P A ++ + S F+ + SLD+K + D + G+
Sbjct: 206 VG------------LVAIGHSLPPSAITEMKMFSNMFMFRASLDLKLIFLDARVAQLTGY 253
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I ++++ + HA D H++ A
Sbjct: 254 EPQDLIERTLYQYIHACDIVHMKFA 278
>gi|4827004|ref|NP_005060.1| single-minded homolog 2 long isoform [Homo sapiens]
gi|2851630|sp|Q14190.2|SIM2_HUMAN RecName: Full=Single-minded homolog 2; AltName: Full=Class E basic
helix-loop-helix protein 15; Short=bHLHe15
gi|2062417|gb|AAB62396.1| transcription factor SIM2 long form [Homo sapiens]
gi|6712195|dbj|BAA89433.1| single-minded 2 protein [Homo sapiens]
gi|119630143|gb|EAX09738.1| single-minded homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 667
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|114684078|ref|XP_001169453.1| PREDICTED: single-minded homolog 2 isoform 2 [Pan troglodytes]
Length = 667
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|164600783|gb|ABY61822.1| endothelial PAS domain protein 1 [Ovis aries]
Length = 142
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F
Sbjct: 29 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELVGYHPEELLGRSAYEF 88
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 89 YHALDSENMTKSHQNLC 105
>gi|148671804|gb|EDL03751.1| single-minded homolog 2 (Drosophila) [Mus musculus]
Length = 657
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRYA 280
>gi|119226237|ref|NP_035507.2| single-minded homolog 2 [Mus musculus]
gi|2498016|sp|Q61079.1|SIM2_MOUSE RecName: Full=Single-minded homolog 2; AltName: Full=SIM
transcription factor; Short=mSIM
gi|1377818|gb|AAB19098.1| sim transcription factor [Mus musculus]
gi|1754613|dbj|BAA11013.1| Sim2 [Mus musculus]
Length = 657
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRYA 280
>gi|27525075|emb|CAD44626.1| single-minded protein [Branchiostoma floridae]
Length = 202
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 48/204 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HTE---DIRAQRSVF-IRLKCTLTSKGRN 54
+V+L G SIYE HP DH E+ +IL+ + HT D +RS RLKC L RN
Sbjct: 14 QVELTGNSIYEYIHPADHEEMAAILTVHQPIHTHIMTDFELERSFLQSRLKCVLAK--RN 71
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
+ YKVIHC+G+L Q M P + +
Sbjct: 72 AGLTCGGYKVIHCSGYLKIKQYTMD-----MAPYEGC---------------------YQ 105
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
+G VA+G +P A ++ L S F+ + SLD+K + D + G
Sbjct: 106 NIG------------LVAVGHSLPPSAITEIKLYSNMFMFRASLDLKLIFLDAKVAQLTG 153
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQ 197
+ P I K+++ + H D FH++
Sbjct: 154 YEPQDLIEKTLYHYVHGSDIFHLR 177
>gi|344294716|ref|XP_003419062.1| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2-like
[Loxodonta africana]
Length = 677
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 47/203 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQ 197
P I K ++ H D FH++
Sbjct: 256 EPQDLIEKKLYHHVHGCDVFHLR 278
>gi|157819625|ref|NP_001100578.1| single-minded homolog 2 [Rattus norvegicus]
gi|149017724|gb|EDL76725.1| single-minded 2 (predicted) [Rattus norvegicus]
Length = 656
Score = 80.1 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L + F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHNNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDTFHLRYA 280
>gi|321476879|gb|EFX87839.1| hypothetical protein DAPPUDRAFT_311851 [Daphnia pulex]
Length = 839
Score = 80.1 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ S+L+ + T ++ +R+ F+R+KC L RN
Sbjct: 117 QVELTGNSIYEYIHPADHEEMTSVLTVHPTVSGSVVQEFEVERAFFVRMKCVLAK--RNA 174
Query: 56 NVKAATYKVIHCTGHLVQNQTP-ASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
+ YKVIHC+G+L P AS G ++ + + + +
Sbjct: 175 GLTTGGYKVIHCSGYLKVRPFPVASAGDSVYAGDGSGGSGNGGV-----------GVGFQ 223
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
+G VA+G +P A ++ L S F+ + SLD++ + D + G
Sbjct: 224 NLG------------LVAVGHSLPPSAITELKLHSNMFMFRASLDLRLIFLDARVAHLTG 271
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ P I K+++ + H D H++ A
Sbjct: 272 YEPQDLIEKTLYQYIHVGDLLHMRFA 297
>gi|1389638|dbj|BAA09700.1| mSim [Mus musculus]
gi|1586925|prf||2205234A Ah receptor nuclear translocator
Length = 657
Score = 80.1 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I ++++ H D+FH++ A
Sbjct: 256 EPQDLIERTLYHHVHGCDTFHLRYA 280
>gi|2599383|gb|AAB84099.1| single-minded 2 protein [Mus musculus]
Length = 657
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I ++++ H D+FH++ A
Sbjct: 256 EPQDLIERTLYHHVHGCDTFHLRYA 280
>gi|390478207|ref|XP_002807815.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2 [Callithrix
jacchus]
Length = 651
Score = 79.7 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQF-----------------MLDMALYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G+ +P A ++ L S F+ + SLD+K + D + + G+
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTEVTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D FH++ A
Sbjct: 256 EPQDLIEKTLYHHVHGCDVFHLRYA 280
>gi|391325150|ref|XP_003737102.1| PREDICTED: single-minded homolog 1-like [Metaseiulus occidentalis]
Length = 496
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 51/209 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE----------DIRAQRSVFIRLKCTLTSK 51
+V+L G SIYE H DH E+ S+LS + ++ RS F+R+KC L
Sbjct: 117 QVELTGNSIYEYVHQNDHDEMASVLSCSSPPEGGQPRGSQGELEIDRSFFLRMKCVLAK- 175
Query: 52 GRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
RN + + YKVIHC+G+L Q +S
Sbjct: 176 -RNAGLTSGGYKVIHCSGYL------------------------------KVKQYSLESA 204
Query: 112 PEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMED 170
P E + VA+G +P A ++ + + F+ + SLD+K + D +
Sbjct: 205 PYESCYQNL--------GLVAVGHSLPPSAVTEIKMHTNMFMFRASLDLKLIFLDSRVSA 256
Query: 171 FLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
G+ P I KS++ F H D H++ A
Sbjct: 257 LTGYEPQELIDKSLYQFVHVSDCMHLRLA 285
>gi|18859359|ref|NP_571911.1| single-minded homolog 2 [Danio rerio]
gi|18056651|gb|AAL58099.1|AF363019_1 single-minded protein [Danio rerio]
gi|40850960|gb|AAH65360.1| Single-minded homolog 2 (Drosophila) [Danio rerio]
Length = 585
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 60/210 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SI+E HP DH E+ ++LS + HT +++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIFEYIHPSDHDEMSAVLSTHQPLHTHFLQELELERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L
Sbjct: 174 GLTSGGYKVIHCSGYL-------------------------------------------- 189
Query: 116 VGEKRRVVTEPSHC-----FVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME 169
+ R +V + S C VA+ +P ++ L S F+ + SLD+K + D +
Sbjct: 190 --QVRPLVLDVSVCQSCCQLVAVAHSLPPSGLTEIKLHSNMFMFRASLDLKLIFLDSRVS 247
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ G P I K+++ H D FH++ A
Sbjct: 248 ELTGHEPQDLIEKTLYHHVHGCDVFHLRFA 277
>gi|348239180|gb|AEP68809.1| hypoxia-inducible factor alpha, partial [Mytilus galloprovincialis]
Length = 151
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++DL+GQS+ E HPCDH E+ +L T ++S+F+R+KCTLT+KGR+VN+K+A+
Sbjct: 58 QIDLIGQSLLEFLHPCDHDEIVDLLCHKTT---NKKKSLFLRMKCTLTTKGRSVNLKSAS 114
Query: 62 YKVIHCTG 69
YKVI +G
Sbjct: 115 YKVIRLSG 122
>gi|348541225|ref|XP_003458087.1| PREDICTED: hypothetical protein LOC100710360 [Oreochromis
niloticus]
Length = 1036
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 47/205 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SI+E HP DH E+ ++LS + + +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIFEYIHPSDHDEMTAVLSLHQAPQHHFLPEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKVIHC+G+L Q D S Q
Sbjct: 174 GLTCGGYKVIHCSGYLKVRQY-----------------MVDMVLYESCYQT--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P ++ L S F+ + SLD K + D + + G+
Sbjct: 208 VG------------LVAVGHSLPPSGITEIKLHSNMFMFRASLDFKLIFLDMRVAELTGY 255
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ HA D FH++ A
Sbjct: 256 EPQDLIDKTLYHHVHACDIFHLRYA 280
>gi|241706697|ref|XP_002413286.1| single-minded, putative [Ixodes scapularis]
gi|215507100|gb|EEC16594.1| single-minded, putative [Ixodes scapularis]
Length = 623
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 48/204 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SIYE HP DH E+ ++L+ + +++ RS F+R+KC L RN
Sbjct: 15 QVELTGNSIYEYIHPADHDEMTAVLTLQSVLPHPHGAQELEVDRSFFVRMKCVLAK--RN 72
Query: 55 VNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEE 114
+ YKVIHC+G++ S + P D +
Sbjct: 73 AGLTTGGYKVIHCSGYVKVKHY-----SMDVAPYDGC---------------------YQ 106
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
+G VA+G +P A ++ + + F+ + SLD+K + D + G
Sbjct: 107 NLG------------LVAVGHSLPPSAITEIKMYANMFMFRASLDLKLIFLDARVAPLTG 154
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQ 197
+ P I K+++ + H D H++
Sbjct: 155 YEPQDLIEKTLYHYIHGYDCLHMR 178
>gi|432090566|gb|ELK23982.1| Hypoxia-inducible factor 3-alpha [Myotis davidii]
Length = 523
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 42/144 (29%)
Query: 54 NVNVKAATYKVIHCTGHLVQNQTPA---SNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
NV+ +V+HC+GHL + PA S GS +EP
Sbjct: 42 NVSKHLGLSQVLHCSGHLRVYKPPAQTSSAGSPNLEP----------------------- 78
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETME 169
P C V I E IPHP + + PL + FL++HSLDMKFTY DE +
Sbjct: 79 ---------------PLQCLVLICEAIPHPDSLEPPLGRGAFLSRHSLDMKFTYCDERIA 123
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDS 193
D G++PD I S +++ HA DS
Sbjct: 124 DVAGYSPDDLIGCSAYEYIHALDS 147
>gi|432898437|ref|XP_004076501.1| PREDICTED: single-minded homolog 2-like [Oryzias latipes]
Length = 683
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 49/206 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SI+E HP DH E+ ++L + + +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIFEYVHPSDHDEMTTVLCLGKPQRHHFSHEFEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP-EE 114
+ YKVIHC+G+L Q + D E +
Sbjct: 174 GLTCGGYKVIHCSGYLKLRQ---------------------------YVMDMALYESCYQ 206
Query: 115 EVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLG 173
VG VA+G +P ++ L S F+ + SLD+K + D + + G
Sbjct: 207 TVG------------LVAVGHSLPPSGITEIKLHSNMFMFRASLDLKLIFLDMKVAELTG 254
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ P I K+++ H D FH++ A
Sbjct: 255 YEPQDLIEKTLYHHVHTCDVFHLRYA 280
>gi|410926962|ref|XP_003976937.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Takifugu rubripes]
Length = 342
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 52/205 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDI-RAQRSVFIRLKCTLTSKGRNVNVKAA 60
+ DLMG++I+EVTHP DH E+ S L E A R +R+K T +GR N ++A
Sbjct: 119 QTDLMGRNIFEVTHPSDHEEIHSNLCLTAEEAWCGADRDFIMRIKSAPTHRGR--NSRSA 176
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+KV+HC G P + L+ Q
Sbjct: 177 AWKVLHCRGRAKVCVGPWAVSCLLLTCQ-------------------------------- 204
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
P P ++ + + TF ++HS+DM+FT+ D + LG+ P+ +
Sbjct: 205 -----------------PLPLSHTLLSTHTFTSQHSMDMRFTHCDHRVTLLLGYRPEELL 247
Query: 181 AKSVFDFHHAQDSFHIQNAFKNPCY 205
+S++ H D+ + N C+
Sbjct: 248 GRSIYQVCHVMDTECLAKNHLNLCF 272
>gi|426219555|ref|XP_004003986.1| PREDICTED: single-minded homolog 2 [Ovis aries]
Length = 524
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 57/215 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL-- 172
VG VA+G+ +P A ++ L S F+ + SLD+K + D + +
Sbjct: 208 VG------------LVAVGQSLPPSAITEIRLHSNMFMFRASLDLKLIFLDSRVTELRPP 255
Query: 173 --------GFNPDIFIAKSVFDFHHAQDSFHIQNA 199
G+ P I K+++ H D FH++ A
Sbjct: 256 PRGVAELPGYEPQDLIEKTLYHHVHGCDVFHLRYA 290
>gi|242005711|ref|XP_002423706.1| single-minded, putative [Pediculus humanus corporis]
gi|212506882|gb|EEB10968.1| single-minded, putative [Pediculus humanus corporis]
Length = 558
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 49/205 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--------TEDIRAQRSVFIRLKCTLTSKGR 53
+V+L G SIYE HP DH E+ S+L+ + ++ +R+ F+R+KC L R
Sbjct: 117 QVELTGNSIYEYIHPHDHDEMISVLTMHQPPPQMTHLGQEFEMERAFFLRMKCVLAK--R 174
Query: 54 NVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
N + + YKVIHC+G+L P D T Q+
Sbjct: 175 NAGLTSGGYKVIHCSGYLKVKSLPM-----------------DTTSYEGCYQNAG----- 212
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
VA+G + A ++ L + F+ + SLD++ + D + +
Sbjct: 213 ----------------LVAVGHSLTPSAITEIKLHTNMFMFRASLDLRLIFLDARVSNLT 256
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQ 197
G+ P I K+++ + H D H++
Sbjct: 257 GYEPQDLIEKTLYHYIHGCDMLHMR 281
>gi|449670512|ref|XP_002167197.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Hydra
magnipapillata]
Length = 518
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 72/222 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-HTEDIRA------------------------ 36
++D+MG S Y+ PCD + + + ED+
Sbjct: 113 QLDMMGDSFYKYVQPCDQATLAEQIGGQVPLEDMEIFDGLFCSEAAPCLQNPKKKICDEL 172
Query: 37 ----QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIE 92
RS F+R+K TLTS+G+NVN+ A+TY+V+HCTG + N T ++ +
Sbjct: 173 KNSPYRSFFLRMKSTLTSRGKNVNINASTYRVVHCTGTI-------KNYKTKLDLNEGF- 224
Query: 93 NQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS-QTF 151
+ C +AIG P+ + + P+ +TF
Sbjct: 225 ----------------------------------TQCLLAIGNPLLTSTSVEFPIDRKTF 250
Query: 152 LTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
++KHSLDMK D LG++ + S + + H D+
Sbjct: 251 ISKHSLDMKIFEMDNITSSILGYSDKEMLGYSWYIYIHLCDT 292
>gi|196167577|gb|ACG71108.1| hypoxia inducible factor 1a [Litopenaeus vannamei]
Length = 82
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 48/60 (80%), Gaps = 3/60 (5%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+VD+MGQS+YE THPCDH EV+ ++SA ++ R F+RLKCTLT+KGR+VN+K+A+
Sbjct: 26 QVDVMGQSLYEYTHPCDHEEVRDLVSAKGPQE---PRHAFLRLKCTLTAKGRSVNLKSAS 82
>gi|328708222|ref|XP_003243628.1| PREDICTED: single-minded homolog 2-like isoform 3 [Acyrthosiphon
pisum]
Length = 593
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 57/204 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQ------------RSVFIRLKCTLT 49
+V+L G SI+E H DH E+ S+LS +++ A+ R F+R+KC L
Sbjct: 154 QVELTGNSIFEYIHQADHDEMISVLSPPLPQNLPAENMMMNSTVFELPRVFFLRMKCVLA 213
Query: 50 SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDD 109
RN + YKVIHC+G+L Q PA
Sbjct: 214 K--RNAGLTTGGYKVIHCSGYLKVRQYPAGMPGV-------------------------- 245
Query: 110 SEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETM 168
E VG VA+G +P A ++ L S F+ + SLD+K + D +
Sbjct: 246 ----ETVG------------LVAVGHSLPPHAITEIKLHSNMFMFRASLDLKLIFLDARV 289
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQD 192
G+ P I K+++ + H D
Sbjct: 290 SQLTGYEPQDLIEKTLYHYIHGND 313
>gi|328708220|ref|XP_003243627.1| PREDICTED: single-minded homolog 2-like isoform 2 [Acyrthosiphon
pisum]
Length = 556
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 57/204 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQ------------RSVFIRLKCTLT 49
+V+L G SI+E H DH E+ S+LS +++ A+ R F+R+KC L
Sbjct: 117 QVELTGNSIFEYIHQADHDEMISVLSPPLPQNLPAENMMMNSTVFELPRVFFLRMKCVLA 176
Query: 50 SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDD 109
RN + YKVIHC+G+L Q PA
Sbjct: 177 K--RNAGLTTGGYKVIHCSGYLKVRQYPAGMPGV-------------------------- 208
Query: 110 SEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETM 168
E VG VA+G +P A ++ L S F+ + SLD+K + D +
Sbjct: 209 ----ETVG------------LVAVGHSLPPHAITEIKLHSNMFMFRASLDLKLIFLDARV 252
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQD 192
G+ P I K+++ + H D
Sbjct: 253 SQLTGYEPQDLIEKTLYHYIHGND 276
>gi|328708224|ref|XP_001944204.2| PREDICTED: single-minded homolog 2-like isoform 1 [Acyrthosiphon
pisum]
Length = 561
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 57/204 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQ------------RSVFIRLKCTLT 49
+V+L G SI+E H DH E+ S+LS +++ A+ R F+R+KC L
Sbjct: 122 QVELTGNSIFEYIHQADHDEMISVLSPPLPQNLPAENMMMNSTVFELPRVFFLRMKCVLA 181
Query: 50 SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDD 109
RN + YKVIHC+G+L Q PA
Sbjct: 182 K--RNAGLTTGGYKVIHCSGYLKVRQYPAGMPGV-------------------------- 213
Query: 110 SEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETM 168
E VG VA+G +P A ++ L S F+ + SLD+K + D +
Sbjct: 214 ----ETVG------------LVAVGHSLPPHAITEIKLHSNMFMFRASLDLKLIFLDARV 257
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQD 192
G+ P I K+++ + H D
Sbjct: 258 SQLTGYEPQDLIEKTLYHYIHGND 281
>gi|3769480|gb|AAC64519.1| single-minded protein [Drosophila melanogaster]
Length = 643
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 42/193 (21%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-HTEDIRAQRSVFIRLKCTLTSKGRNVNVKAA 60
+V+L G SI+E H D E+ +ILS + H +++ F+R+KC L RN + +
Sbjct: 115 QVELTGNSIFEYYHNYDQDEMNAILSLHPHINQHPIEKTFFLRMKCVLAK--RNAGLTTS 172
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
+KVIHC+G+L P ++ D +GS IQ+
Sbjct: 173 GFKVIHCSGYLKARIYP---------------DRGDG--QGSLIQNLG------------ 203
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
VA+G +P A ++ L Q F+ + LDMK + D + G+ P
Sbjct: 204 ---------LVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDL 254
Query: 180 IAKSVFDFHHAQD 192
I K+++ + HA D
Sbjct: 255 IEKTLYQYIHAAD 267
>gi|10436390|dbj|BAB14824.1| unnamed protein product [Homo sapiens]
Length = 237
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 40/164 (24%)
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSD 96
+R +R+K TLTS+GR +N+KAAT+KV++C+GH+ + PA
Sbjct: 75 ERCFSLRMKSTLTSRGRTLNLKAATWKVLNCSGHMRAYKPPAQTSPA------------- 121
Query: 97 NTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHS 156
DSEP P C V I E IPHP + + F+ +
Sbjct: 122 ---------GSPDSEP-------------PLQCLVLICEAIPHPGSLE-----GFVMVLT 154
Query: 157 LDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ Y E + + LG + I S+FDF H D +Q+A
Sbjct: 155 AEGDMAYLSENVSNHLGLSQLELIGHSIFDFIHPCDQEELQDAL 198
>gi|74190472|dbj|BAE25907.1| unnamed protein product [Mus musculus]
Length = 470
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++PD I S
Sbjct: 21 PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSA 80
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 81 YEYIHALDS 89
>gi|355694637|gb|AER99738.1| hypoxia inducible factor 3, alpha subunit [Mustela putorius furo]
Length = 133
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLT +GR +N
Sbjct: 23 QLELIGHSIFDFIHPCDQEELQDALTPRQSLSKKKLEAPTERCFSLRMKSTLTGRGRTLN 82
Query: 57 VKAATYKVIHCTGHLVQNQTPAS---NGSTLMEP 87
+KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 83 LKAATWKVLHCSGHMRAYKPPAQMSPAGSPNLEP 116
>gi|17432319|gb|AAL39015.1|AF416641_1 inhibitory PAS domain protein [Mus musculus]
Length = 307
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNV 57
++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N+
Sbjct: 136 LELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLNL 195
Query: 58 KAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
KAAT+KV+HC+GH+ + PA GS EP
Sbjct: 196 KAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEP 228
>gi|383856713|ref|XP_003703852.1| PREDICTED: uncharacterized protein LOC100878780 [Megachile
rotundata]
Length = 749
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 52/214 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------ANHTEDIRAQRSVFIRLKC 46
+VDL G SI+E + DH+E++S+L+ N +I +R +R+KC
Sbjct: 179 QVDLTGNSIFEYIYDHDHNEMQSVLNLPQSPADLAGVTFPPPNSRGEIELERIFILRMKC 238
Query: 47 TLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQD 106
L RN + YKVIHC+G+L ++
Sbjct: 239 NLAK--RNAGLVTEGYKVIHCSGYL-----------------------------RCIVEG 267
Query: 107 KDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYAD 165
SE E+ G R + +A+G +P + ++ L Q F+ + SLDMK + D
Sbjct: 268 AVGSEYEDGSGRCIRNIG-----LLAVGHSLPGRSLTEIKLYQNMFMFRASLDMKLIFVD 322
Query: 166 ETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++ G+NP I K+++ + H D + + +A
Sbjct: 323 GSVSQLTGYNPTDLIEKTLYHYVHGCDMWQLCHA 356
>gi|351705699|gb|EHB08618.1| Single-minded-like protein 1 [Heterocephalus glaber]
Length = 754
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 59/205 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKV C M P D +
Sbjct: 174 GLTCGGYKV--CLD---------------MSPFDGC---------------------YQT 195
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGF 174
VG VA+G +P A ++ L S F+ + SLDMK + D + + G+
Sbjct: 196 VG------------LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGY 243
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNA 199
P I K+++ H D+FH++ A
Sbjct: 244 EPQDLIEKTLYHHVHGCDTFHLRCA 268
>gi|307198404|gb|EFN79346.1| Single-minded-like protein 1 [Harpegnathos saltator]
Length = 774
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 50/215 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS--------------ANHTEDIRAQRSVFIRLKCT 47
+V+L G SI+E +P D +E+ S+L+ N +I +R+ +R+KC
Sbjct: 200 QVELTGNSIFEYIYPDDRNEMISMLNLPSNSPDHRFTYPPPNSRGEIELERAFLLRMKCI 259
Query: 48 LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDK 107
L RN + + YKVIHC+G+L P +E + TR
Sbjct: 260 LAK--RNAGLVSEGYKVIHCSGYL---------KCVFDGP---VEYEDSLTR-------- 297
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYADE 166
VG R V +A+G +P + ++ L Q F+ + SLD+K + D
Sbjct: 298 -------NVGLIRTV------GLLAVGHSLPTSSITEIKLHQNMFMFRASLDLKLIFLDA 344
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ G++P I K+++ + HA D H++ A +
Sbjct: 345 RVAHLTGYDPPDLIEKTLYHYVHAADVVHLRQAHR 379
>gi|47223798|emb|CAF98568.1| unnamed protein product [Tetraodon nigroviridis]
Length = 710
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS------ANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SI+E HP DH E+ ++LS + +++ A+RS F+R+KC L RN
Sbjct: 116 QVELTGNSIFEYIHPSDHDEMTAVLSLCQPAHQHLSQEYEAERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ YKV G T + D RR +A
Sbjct: 174 GLTCGGYKVSGGYGVFWNRAT-------------TLGGLWDACRRAAACLRAQVIHCSGY 220
Query: 116 VGEKRRVVTEPSH--CF-----VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADET 167
+ + ++ + C+ VA+G +P ++ L S F+ + SLD K + D
Sbjct: 221 LKVRHCMLDLALYESCYQTAGLVAVGHSLPPSGVTEIKLFSNMFMFRASLDFKLIFLDTR 280
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ + GF P I K+++ HA D FH++ A
Sbjct: 281 VAELTGFEPQDLIEKTLYHHVHACDIFHLRYA 312
>gi|391339768|ref|XP_003744219.1| PREDICTED: uncharacterized protein LOC100904617 [Metaseiulus
occidentalis]
Length = 1160
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 42/201 (20%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILSA--NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAA 60
+++G S+ HPCD+ E++++ + E R +R++ +R+KCT+++KGR VN+K+A
Sbjct: 248 AEMLGVSLETFVHPCDYQELRTLFLGFKENAESDRIERTLQVRMKCTISAKGRVVNIKSA 307
Query: 61 TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR 120
YKV+ + + S L EP
Sbjct: 308 AYKVVKFQVRVFKRND-VQYMSALCEPM-------------------------------- 334
Query: 121 RVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
CF + DV F T+H+L++ F E +F+GF+ D
Sbjct: 335 ------GPCFAKLRPTRSSFLTSDVKTCLDFTTQHALNLVFKSV-EGFPEFIGFSADELK 387
Query: 181 AKSVFDFHHAQDSFHIQNAFK 201
S++D H D F + FK
Sbjct: 388 KLSLYDLIHPADLFEMNGHFK 408
>gi|332023709|gb|EGI63933.1| Single-minded-like protein 1 [Acromyrmex echinatior]
Length = 688
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 52/214 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------ANHTEDIRAQRSVFIRLKC 46
+V+L G SI+E +P D +E+ S+L+ N +I +R+ +R+KC
Sbjct: 114 QVELTGNSIFEYIYPEDRNEMVSVLNLPQSPADLAGFTFPPPNSRGEIELERAFLLRMKC 173
Query: 47 TLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQD 106
L RN + YKVIHC+G+L ++
Sbjct: 174 ILAK--RNAGLVTEGYKVIHCSGYL-----------------------------KCIVEA 202
Query: 107 KDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYAD 165
SE E+ VG R V +A+G +P + ++ L+ F+ + SLD+K + D
Sbjct: 203 PIGSEYEDGVGRCIRNV-----GLMAVGHSLPTSSITEIKLNHNMFMFRASLDLKLIFLD 257
Query: 166 ETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ G+ P I K+++ + HA D +++A
Sbjct: 258 ARVTPLTGYEPPDLIEKTLYHYVHACDILQLRHA 291
>gi|380011376|ref|XP_003689783.1| PREDICTED: single-minded homolog 1-A-like [Apis florea]
Length = 738
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 53/220 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-------------SANHTEDIRAQRSVFIRLKCTL 48
+V+L G SI+E + DH+E+ S+L SAN +I +R +R+KC L
Sbjct: 153 QVELTGNSIFEYIYQNDHAEMLSVLNLPQSPADLASFTSANSRGEIELERVFILRMKCNL 212
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
R + YKVIHC+G+L ++
Sbjct: 213 AK--RCAGLVTEGYKVIHCSGYLR-----------------------------CVVEGPV 241
Query: 109 DSEPEEEVGEK--RRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYAD 165
SE E+ G R+V +A+G +P +V L Q F+ + SLD+K + D
Sbjct: 242 GSEYEDGAGRHCIRKV------GLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIFVD 295
Query: 166 ETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPCY 205
+ G++P I K+++ + H D +++A Y
Sbjct: 296 ANVSQLTGYDPPDLIEKTLYHYVHGCDMMQLRHAHGTLLY 335
>gi|328792532|ref|XP_394146.4| PREDICTED: hypothetical protein LOC410669 [Apis mellifera]
Length = 738
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 53/220 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-------------SANHTEDIRAQRSVFIRLKCTL 48
+V+L G SI+E + DH+E+ S+L SAN +I +R +R+KC L
Sbjct: 156 QVELTGNSIFEYIYQNDHAEMLSVLNLPQSPADLASFTSANSRGEIELERVFILRMKCNL 215
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
R + YKVIHC+G+L ++
Sbjct: 216 AK--RCAGLVTEGYKVIHCSGYL-----------------------------RCVVEGPV 244
Query: 109 DSEPEEEVGEK--RRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYAD 165
SE E+ G R+V +A+G +P +V L Q F+ + SLD+K + D
Sbjct: 245 GSEYEDGAGRHCIRKV------GLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIFVD 298
Query: 166 ETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPCY 205
+ G++P I K+++ + H D +++A Y
Sbjct: 299 ANVSQLTGYDPPDLIEKTLYHYVHGCDMMQLRHAHGTLLY 338
>gi|390346230|ref|XP_003726505.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 747
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 73/242 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSAN--------------------HTEDIR----AQRS 39
D +G S+Y++ H D +++ LS + H +R ++R
Sbjct: 146 DWIGGSVYDLVHTDDADKIREQLSTSEPHNSGRILDLKTGTVKKEGHQSSMRFCMGSRRG 205
Query: 40 VFIRLK--------------CTLTSKGRNVNVK-AATYKVIHCTGHLVQNQTPASNGSTL 84
R+K C L ++ + K Y V+HCTG+ ++N P++
Sbjct: 206 FICRMKYGNAQVDPMTMSRFCHLRNRSSLGSPKDTEQYAVVHCTGY-IKNWPPSAGLVPQ 264
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPHPAN 142
MEPQ+ D+E V + +C VAIG + P
Sbjct: 265 MEPQEG------------------DAE----------VASTNHYCLVAIGRLQVTSTPNC 296
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ + T F+++HS+D KFT+ D+ + LG+ P + KS F+F+H +D H++++
Sbjct: 297 ADLGGAGTPNEFISRHSIDGKFTFVDQRVTGVLGYQPQELLGKSSFEFYHNEDQSHLKDS 356
Query: 200 FK 201
F+
Sbjct: 357 FE 358
>gi|390346232|ref|XP_781474.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 760
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 73/242 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSAN--------------------HTEDIR----AQRS 39
D +G S+Y++ H D +++ LS + H +R ++R
Sbjct: 159 DWIGGSVYDLVHTDDADKIREQLSTSEPHNSGRILDLKTGTVKKEGHQSSMRFCMGSRRG 218
Query: 40 VFIRLK--------------CTLTSKGRNVNVK-AATYKVIHCTGHLVQNQTPASNGSTL 84
R+K C L ++ + K Y V+HCTG+ ++N P++
Sbjct: 219 FICRMKYGNAQVDPMTMSRFCHLRNRSSLGSPKDTEQYAVVHCTGY-IKNWPPSAGLVPQ 277
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPHPAN 142
MEPQ+ D+E V + +C VAIG + P
Sbjct: 278 MEPQEG------------------DAE----------VASTNHYCLVAIGRLQVTSTPNC 309
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ + T F+++HS+D KFT+ D+ + LG+ P + KS F+F+H +D H++++
Sbjct: 310 ADLGGAGTPNEFISRHSIDGKFTFVDQRVTGVLGYQPQELLGKSSFEFYHNEDQSHLKDS 369
Query: 200 FK 201
F+
Sbjct: 370 FE 371
>gi|1408537|dbj|BAA12919.1| Sim [Homo sapiens]
Length = 247
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 47/171 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQ-----------------YMLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYAD 165
VG VA+G+ +P A ++ L S F+ + SLD+K + D
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLD 246
>gi|90074851|dbj|BAE87099.1| Single minded [Achaearanea tepidariorum]
Length = 755
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 53/208 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN----HTE------DIRAQRSVFIRLKCTLTSK 51
+V+L G SIYE P DH E+ ++LS H + + +R F+R+KC L
Sbjct: 117 QVELTGDSIYEYIDPTDHDEMAAVLSLQTPPVHPQIPAPQGEFELERLFFVRMKCVLAK- 175
Query: 52 GRNVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
RN + + YKVIHC+G+L VQ + N+E +
Sbjct: 176 -RNAGLTSGGYKVIHCSGYLKVQ--------------RYNVE-----------------A 203
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME 169
P + + + VA+G +P A ++ + S F+ + ++D++ + D +
Sbjct: 204 PPYDSCYQNLGL--------VAVGHSLPPSAITEIKMYSNMFMFRANMDLRLIFLDARVT 255
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQ 197
+ G+ P I K+++ + HA D ++
Sbjct: 256 NLTGYQPQDLIEKTLYHYIHASDCVQMR 283
>gi|157128070|ref|XP_001661300.1| single-minded [Aedes aegypti]
gi|108872709|gb|EAT36934.1| AAEL011013-PA [Aedes aegypti]
Length = 715
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 88/239 (36%), Gaps = 81/239 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-------------------------------- 29
+V+L G SIYE H D E+ S+LS
Sbjct: 117 QVELTGNSIYEYIHNYDQDEMTSVLSLQPNMFATPPQHHPHHHQPTTPHHHHHHPHHHHH 176
Query: 30 ----------HTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPAS 79
++ I +R+ F+R+KC L RN + + YKVIHC+G+L P
Sbjct: 177 HHHHHHPFNQQSQTIEIERTFFLRMKCVLAK--RNAGLTTSGYKVIHCSGYLKARIYPGD 234
Query: 80 NGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH 139
ST + I+N VA+G +P
Sbjct: 235 --STYGDGHSCIQNLG----------------------------------LVAVGHSLPP 258
Query: 140 PANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQ 197
A ++ L Q F+ + S+D+K + D + G+ P I K+++ + HA D H++
Sbjct: 259 SAITEIKLHQNMFMFRASMDLKLIFLDAKVAQLTGYEPQDLIEKTLYQYIHASDILHMR 317
>gi|59933250|ref|NP_001012371.1| hypoxia-inducible factor 1, alpha subunit, like 2 [Danio rerio]
gi|57164638|gb|AAW34262.1| hypoxia inducible factor alpha-like protein [Danio rerio]
Length = 523
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 54/199 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++DL+G+S+ E HPCD EVK IL+ + VFIR+K + +N K
Sbjct: 147 QMDLIGRSLLEFLHPCDQMEVKDILTRLIGNQEPQKCEVFIRIK-------KAMNTKLTG 199
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
+K+I C+G + TP S+ L
Sbjct: 200 WKIIQCSGKKRSSATPGSSCLVL------------------------------------- 222
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
C V PI D L+ TF++ HS DM FTY + +GF +
Sbjct: 223 ------ECRVL---PIQEITEVDEALNACTFMSVHSPDMTFTYCHSRVVKLIGFRDTDLL 273
Query: 181 AKSVFDFHHAQDSFHIQNA 199
+SV+ ++H D I+ A
Sbjct: 274 GQSVYQYYHPSDCQQIRKA 292
>gi|166998249|ref|NP_001107795.1| CYCLE [Tribolium castaneum]
gi|140270864|gb|ABO86538.1| CYCLE [Tribolium castaneum]
Length = 675
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 77/234 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSA---NHTEDI----------------------RAQR 38
DL+GQS++++ HP D ++ K LS+ N E + A+R
Sbjct: 230 DLLGQSLFDILHPKDVAKAKEQLSSSDLNPRERLIDAKTMLPVKADVPQNGSRLCPGARR 289
Query: 39 SVFIRLKCTLTS-------------KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLM 85
S F R+KC ++S K + Y VIHCTG+L ++ PA G L
Sbjct: 290 SFFCRMKCKVSSQVKEEADTTTGCHKRKKQQNSDKRYNVIHCTGYL-KSWAPAKIG--LE 346
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH-----P 140
+ +++ EN+S N C VA+G +PH
Sbjct: 347 DQENDGENESCNL-----------------------------SCLVAVGRVLPHISTVAA 377
Query: 141 ANYDVPLSQ--TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
A P Q F+++H+LD KF Y D+ LGF + S+++++H D
Sbjct: 378 ATQTRPNVQPIQFISRHTLDGKFLYVDQRATLVLGFLQQELLGSSMYEYYHHDD 431
>gi|256089970|ref|XP_002581006.1| meso-ectoderm gene expression control protein; single-minded
[Schistosoma mansoni]
Length = 673
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 54/202 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE--------DIRAQRSVFIRLKCTLTSKGR 53
+V++ G + E HP DH E+K IL+ + +E + +RS F+R+KC L R
Sbjct: 30 QVEMTGNEMTEYLHPLDHDELKQILTVHPSEIAANSGQSEFTLERSFFLRVKCVLAK--R 87
Query: 54 NVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
N + A +KVIHC GHL R I D +
Sbjct: 88 NAGLTTAGFKVIHCNGHL----------------------------RVRVIH-LDGYQYY 118
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHP--ANYDVPLSQ-TFLTKHSLDMKFTYADETMED 170
+ +G ++ IP P N ++ LS F+ + SLD+K + + +
Sbjct: 119 QNLG------------LISFAYAIPSPNTNNTEIRLSMDMFMFRASLDLKLIFLEGRISQ 166
Query: 171 FLGFNPDIFIAKSVFDFHHAQD 192
GF P + K+++ H D
Sbjct: 167 ITGFQPQELVDKTLYQLVHTAD 188
>gi|360044432|emb|CCD81980.1| meso-ectoderm gene expression control protein [Schistosoma mansoni]
Length = 672
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 54/202 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE--------DIRAQRSVFIRLKCTLTSKGR 53
+V++ G + E HP DH E+K IL+ + +E + +RS F+R+KC L R
Sbjct: 29 QVEMTGNEMTEYLHPLDHDELKQILTVHPSEIAANSGQSEFTLERSFFLRVKCVLAK--R 86
Query: 54 NVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPE 113
N + A +KVIHC GHL R I D +
Sbjct: 87 NAGLTTAGFKVIHCNGHL----------------------------RVRVIH-LDGYQYY 117
Query: 114 EEVGEKRRVVTEPSHCFVAIGEPIPHP--ANYDVPLSQ-TFLTKHSLDMKFTYADETMED 170
+ +G ++ IP P N ++ LS F+ + SLD+K + + +
Sbjct: 118 QNLG------------LISFAYAIPSPNTNNTEIRLSMDMFMFRASLDLKLIFLEGRISQ 165
Query: 171 FLGFNPDIFIAKSVFDFHHAQD 192
GF P + K+++ H D
Sbjct: 166 ITGFQPQELVDKTLYQLVHTAD 187
>gi|426392995|ref|XP_004062819.1| PREDICTED: single-minded homolog 2 [Gorilla gorilla gorilla]
Length = 831
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 47/175 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT------EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEE 115
+ + YKVIHC+G+L Q D + S Q
Sbjct: 174 GLTCSGYKVIHCSGYLKIRQY-----------------MLDMSLYDSCYQI--------- 207
Query: 116 VGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETME 169
VG VA+G+ +P A ++ L S F+ + SLD+K + D + E
Sbjct: 208 VG------------LVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSSFE 250
>gi|358332012|dbj|GAA50744.1| single-minded protein [Clonorchis sinensis]
Length = 838
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 56/210 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE--------DIRAQRSVFIRLKCTLTSKGR 53
+V++ G + E HP DH E+K +L+ + +E D +RS +R+KC L R
Sbjct: 334 QVEMTGNEMIEYLHPLDHEELKQLLTIHPSELATNGGAQDFLLERSFVLRIKCVLAK--R 391
Query: 54 NVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
N + A +KVIHC+GHL V++ T D
Sbjct: 392 NAGLTTAGFKVIHCSGHLKVRSVT------------------------------VDGFPY 421
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHP--ANYDVPL-SQTFLTKHSLDMKFTYADETME 169
+ +G +A IP P N ++ L S F+ + SLD+K + + +
Sbjct: 422 YQNLG------------LIAFAYAIPSPNANNTEIRLTSGMFMFRASLDLKLIFLEGRIA 469
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
GF P I K+++ H DS ++ A
Sbjct: 470 SITGFQPQELIDKTLYQLVHVVDSVALRRA 499
>gi|124054141|gb|ABM89259.1| SIM1 [Pongo pygmaeus]
Length = 613
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 41/164 (25%)
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSD 96
+RS F+R+KC L RN + YKVIHC+G+L Q S M P D
Sbjct: 4 ERSFFLRMKCVLAK--RNAGLTCGGYKVIHCSGYLKIRQY-----SLDMSPFDGCY---- 52
Query: 97 NTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKH 155
+ VG VA+G +P A ++ L S F+ +
Sbjct: 53 -----------------QNVG------------LVAVGHSLPPSAVTEIKLHSNMFMFRA 83
Query: 156 SLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
SLDMK + D + + G+ P I K+++ H D+FH++ A
Sbjct: 84 SLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCA 127
>gi|220942606|gb|ACL83846.1| sim-PA [synthetic construct]
Length = 689
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 244 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|45551885|ref|NP_731771.3| single-minded, isoform B [Drosophila melanogaster]
gi|45446472|gb|AAN14343.3| single-minded, isoform B [Drosophila melanogaster]
Length = 664
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 115 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 174
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 175 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 219
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 220 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 252
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 253 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 297
>gi|195500692|ref|XP_002097482.1| GE26246 [Drosophila yakuba]
gi|194183583|gb|EDW97194.1| GE26246 [Drosophila yakuba]
Length = 699
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
D + Q GS IQ+ VA+G +P A ++ L
Sbjct: 244 DRGDGQ------GSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|442618830|ref|NP_001262527.1| single-minded, isoform C [Drosophila melanogaster]
gi|440217377|gb|AGB95909.1| single-minded, isoform C [Drosophila melanogaster]
Length = 675
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 126 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 185
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 186 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 230
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 231 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 263
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 264 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 308
>gi|28571685|ref|NP_524340.2| single-minded, isoform A [Drosophila melanogaster]
gi|21744281|gb|AAM76199.1| RE54280p [Drosophila melanogaster]
gi|28381286|gb|AAF54902.3| single-minded, isoform A [Drosophila melanogaster]
Length = 688
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 244 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|31077159|sp|P05709.3|SIM_DROME RecName: Full=Protein single-minded
Length = 697
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 244 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|322792391|gb|EFZ16375.1| hypothetical protein SINV_10619 [Solenopsis invicta]
Length = 631
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 52/212 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------------ANHTEDIRAQRSVFIRLKCTL 48
+V+L G SI+E +P D E+ S+L+ N +I +R+ +R+KC L
Sbjct: 59 QVELTGNSIFEYIYPEDRDEMISVLNLPPANLPGFTYPPPNSRGEIELERAFLLRMKCIL 118
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
RN + YKVIHC+G+L +ME E ++ R
Sbjct: 119 AK--RNAGLVTEGYKVIHCSGYL----------KCVMEAPLGTEYENGVGYR-------- 158
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYADET 167
VG +A+G +P + ++ L F+ + SLD+K + D
Sbjct: 159 ------NVG------------LMAVGHSLPTSSITEIKLHHNMFMFRASLDLKLIFLDAR 200
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ G++P I K+++ + H D F +++A
Sbjct: 201 VAQLTGYDPPDLIEKTLYHYVHGCDIFQLRHA 232
>gi|194901552|ref|XP_001980316.1| GG19445 [Drosophila erecta]
gi|190652019|gb|EDV49274.1| GG19445 [Drosophila erecta]
Length = 698
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 244 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|158465|gb|AAA28900.1| sim nuclear protein, partial [Drosophila melanogaster]
Length = 655
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 97 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 156
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 157 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 201
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 202 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 234
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 235 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 279
>gi|195571241|ref|XP_002103612.1| GD18883 [Drosophila simulans]
gi|194199539|gb|EDX13115.1| GD18883 [Drosophila simulans]
Length = 697
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 244 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|195329352|ref|XP_002031375.1| GM24085 [Drosophila sechellia]
gi|194120318|gb|EDW42361.1| GM24085 [Drosophila sechellia]
Length = 632
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 74 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 133
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 134 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 178
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
++ D +GS IQ+ VA+G +P A ++ L
Sbjct: 179 ----DRGDG--QGSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 211
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 212 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 256
>gi|350427755|ref|XP_003494869.1| PREDICTED: single-minded homolog 2-like [Bombus impatiens]
Length = 738
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 55/222 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------ANHTEDIRAQRSVFIRLKC 46
+V+L G SI+E + DH+E+ S+L+ AN +I +R +R+KC
Sbjct: 156 QVELTGNSIFEYIYQNDHAEMLSVLNLPQSPADLAGFTFPPANSRGEIELERVFILRMKC 215
Query: 47 TLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQD 106
L R + YKVIHC+G+L ++
Sbjct: 216 NLAK--RCAGLVTEGYKVIHCSGYL-----------------------------RCIVEG 244
Query: 107 KDDSEPEEEVGEK--RRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTY 163
SE E+ G R+V +A+G +P +V L Q F+ + SLD+K +
Sbjct: 245 PVGSEYEDGAGRHCIRKV------GLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIF 298
Query: 164 ADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPCY 205
D + G++P I K+++ + H D +++A Y
Sbjct: 299 VDANVSQLTGYDPPDLIEKTLYHYVHGCDMMQLRHAHGTLLY 340
>gi|340708761|ref|XP_003392990.1| PREDICTED: single-minded homolog 1-A-like [Bombus terrestris]
Length = 738
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 55/222 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------ANHTEDIRAQRSVFIRLKC 46
+V+L G SI+E + DH+E+ S+L+ AN +I +R +R+KC
Sbjct: 156 QVELTGNSIFEYIYQNDHAEMLSVLNLPQSPADLAGFTFPPANSRGEIELERVFILRMKC 215
Query: 47 TLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQD 106
L R + YKVIHC+G+L ++
Sbjct: 216 NLAK--RCAGLVTEGYKVIHCSGYL-----------------------------RCIVEG 244
Query: 107 KDDSEPEEEVGEK--RRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTY 163
SE E+ G R+V +A+G +P +V L Q F+ + SLD+K +
Sbjct: 245 PVGSEYEDGAGRHCIRKV------GLLAVGHSLPGRCLTEVKLYQNMFMFRASLDLKLIF 298
Query: 164 ADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPCY 205
D + G++P I K+++ + H D +++A Y
Sbjct: 299 VDANVSQLTGYDPPDLIEKTLYHYVHGCDMMQLRHAHGTLLY 340
>gi|62203558|gb|AAH93209.1| Hif1al2 protein [Danio rerio]
Length = 660
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 78/199 (39%), Gaps = 54/199 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++DL+G+S+ E HPCD EVK IL+ + VF+R+K + +N K
Sbjct: 144 QMDLIGRSLLEFLHPCDQMEVKDILTRLIGNQEPQKCEVFLRIK-------KAMNTKLTG 196
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
+K+I C+G + TP S+ L
Sbjct: 197 WKIIQCSGKKRSSATPGSSCLVL------------------------------------- 219
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
C V PI D L+ TF++ HS DM FTY + +GF +
Sbjct: 220 ------ECRVL---PIQEITEVDEALNACTFMSVHSPDMTFTYCHSRVVKLIGFRDTDLL 270
Query: 181 AKSVFDFHHAQDSFHIQNA 199
+SV+ ++H D I+ A
Sbjct: 271 GQSVYQYYHPSDCQQIRKA 289
>gi|194741162|ref|XP_001953058.1| GF17581 [Drosophila ananassae]
gi|190626117|gb|EDV41641.1| GF17581 [Drosophila ananassae]
Length = 746
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHSYDQDEMNAILSLHPHMHQHPLAQTHTPIGSPNGVQHPSAYGHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
D + Q GS IQ+ VA+G +P A ++ L
Sbjct: 244 DCGDGQ------GSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|198451724|ref|XP_002137347.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
gi|198131616|gb|EDY67905.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
Length = 767
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHSYDQDEMNAILSLHPHMHQHPLAQTHTPIGSPNGVQHPSVYGHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
D + Q GS IQ+ VA+G +P A ++ L
Sbjct: 244 DCGDGQ------GSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|195395110|ref|XP_002056179.1| single-minded [Drosophila virilis]
gi|194142888|gb|EDW59291.1| single-minded [Drosophila virilis]
Length = 761
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHSYDQDEMNAILSLHPHMHQHPLAQTHTPIGSPNGVQHPAAYGHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
D + Q GS IQ+ VA+G +P A ++ L
Sbjct: 244 DCGDGQ------GSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|195145848|ref|XP_002013902.1| GL24392 [Drosophila persimilis]
gi|194102845|gb|EDW24888.1| GL24392 [Drosophila persimilis]
Length = 764
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 76/225 (33%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------A 28
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHSYDQDEMNAILSLHPHMHQHPLAQTHTPIGSPNGVQHPSVYGHDRG 198
Query: 29 NHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP----------- 243
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS 148
D + Q GS IQ+ VA+G +P A ++ L
Sbjct: 244 DCGDGQ------GSLIQNLG---------------------LVAVGHSLPSSAITEIKLH 276
Query: 149 Q-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 277 QNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|195449946|ref|XP_002072296.1| GK22407 [Drosophila willistoni]
gi|194168381|gb|EDW83282.1| GK22407 [Drosophila willistoni]
Length = 743
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 87/223 (39%), Gaps = 72/223 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----------HT------------------- 31
+V+L G SI+E H D E+ +ILS + HT
Sbjct: 139 QVELTGNSIFEYIHSYDQDEMNAILSLHPHMHQHPLAQTHTPIGSPNGVQHPTTYGHDRG 198
Query: 32 -EDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
I +++ F+R+KC L RN + + +KVIHC+G+L P D
Sbjct: 199 SHTIEIEKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP-----------DC 245
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ- 149
+ Q GS IQ+ VA+G +P A ++ L Q
Sbjct: 246 GDGQ------GSLIQNLG---------------------LVAVGHSLPSSAITEIKLHQN 278
Query: 150 TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 279 MFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|195108655|ref|XP_001998908.1| GI23369 [Drosophila mojavensis]
gi|193915502|gb|EDW14369.1| GI23369 [Drosophila mojavensis]
Length = 779
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 87/223 (39%), Gaps = 72/223 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----------HT------------------- 31
+V+L G SI+E H D E+ +ILS + HT
Sbjct: 139 QVELTGNSIFEYIHSYDQDEMNAILSLHPHMHQHPLAQTHTPIGSPNGVQHPSAYGHDRG 198
Query: 32 -EDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
I +++ F+R+KC L RN + + +KVIHC+G+L P D
Sbjct: 199 SHTIEIEKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP-----------DC 245
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ- 149
+ Q GS IQ+ VA+G +P A ++ L Q
Sbjct: 246 GDGQ------GSLIQNLG---------------------LVAVGHSLPSSAITEIKLHQN 278
Query: 150 TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 279 MFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|307172407|gb|EFN63869.1| Single-minded-like protein 1 [Camponotus floridanus]
Length = 688
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 52/214 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------ANHTEDIRAQRSVFIRLKC 46
+V+L G SI+E +P D +E+ S+L+ N +I +R+ +R+KC
Sbjct: 117 QVELTGNSIFEYIYPDDRNEMISVLNLPQSPAELAGFTFPPPNSRGEIELERAFLLRMKC 176
Query: 47 TLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQD 106
L RN + YKVIHC+G+L ++
Sbjct: 177 ILAK--RNAGLVTEGYKVIHCSGYL-----------------------------KCIVEL 205
Query: 107 KDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYAD 165
SE E+ + R V +A+G +P + ++ L F+ + SLD+K + D
Sbjct: 206 PIGSEYEDGISRCVRNV-----GLLAVGHSLPTSSITEIKLHHNMFMFRASLDLKLIFLD 260
Query: 166 ETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+ G++P I K+++ + H D +++A
Sbjct: 261 ARVAQLTGYDPPDLIEKTLYHYVHGCDVLQLRHA 294
>gi|38605073|sp|Q9QZQ0.1|NPAS3_MOUSE RecName: Full=Neuronal PAS domain-containing protein 3;
Short=Neuronal PAS3; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP6; AltName:
Full=Member of PAS protein 6
gi|6492334|gb|AAF14283.1|AF173871_1 neuronal PAS3 [Mus musculus]
Length = 925
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS TED +
Sbjct: 191 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASSASSSSQSETPEPV 250
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + P S+G
Sbjct: 251 ETTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVPLSHGR 307
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 308 TV---------------------------PSQIMG------------LVVVAHALPPPTI 328
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 329 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 379
>gi|47078698|gb|AAT09983.1| hypoxia-inducible factor 1 alpha subunit [Peromyscus leucopus]
Length = 75
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 142 NYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
N ++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 1 NIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 56
>gi|391224603|gb|AFM37575.1| hypoxia inducible factor, alpha subunit [Trichoplax adhaerens]
Length = 548
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 87/221 (39%), Gaps = 57/221 (25%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRA-----------QRSVFIRLKCTLTSK 51
VDL G SIY+ H D E + + + T D+R+ +F+R+K K
Sbjct: 131 VDLCGLSIYDYLHTADAQEFSNNIRSGCT-DLRSTYCKDVMKKGKWHEIFMRMKSAFY-K 188
Query: 52 GRNVNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDS 110
++V K+ YK + CTG VQ ++ + + DNI
Sbjct: 189 NQSVTPKSPDYKTLRCTGRCCVQLRSSSDKICNDLRATDNI------------------- 229
Query: 111 EPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQTFL-TKHSLDMKFTYADETME 169
S CFV EP+P DVP Q + T +LD+KF + D +
Sbjct: 230 ----------------SACFVCFAEPLPSSIAMDVPPQQKYFKTTFTLDLKFNHCDNRIT 273
Query: 170 DFLGFNPDIFIAKSVF------DFHHAQDSFHIQNAFKNPC 204
D+ G++P S++ D H A++ FH K C
Sbjct: 274 DWTGYDPVDLYGMSLYQLCDRGDDHRAKE-FHKNLILKGQC 313
>gi|159162817|pdb|1P97|A Chain A, Nmr Structure Of The C-Terminal Pas Domain Of Hif2a
Length = 114
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 43/57 (75%)
Query: 148 SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 5 SKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 61
>gi|442618832|ref|NP_001262528.1| single-minded, isoform D [Drosophila melanogaster]
gi|440217378|gb|AGB95910.1| single-minded, isoform D [Drosophila melanogaster]
Length = 672
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 89/233 (38%), Gaps = 84/233 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------- 27
+V+L G SI+E H D E+ +ILS
Sbjct: 115 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPAAFLNSLQLAQTHTPIGSPNGVQHP 174
Query: 28 -------ANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASN 80
+HT +I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 175 SAYDHDRGSHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYP--- 227
Query: 81 GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHP 140
++ D +GS IQ+ VA+G +P
Sbjct: 228 ------------DRGDG--QGSLIQNLG---------------------LVAVGHSLPSS 252
Query: 141 ANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
A ++ L Q F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 253 AITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 305
>gi|195037447|ref|XP_001990172.1| GH18379 [Drosophila grimshawi]
gi|193894368|gb|EDV93234.1| GH18379 [Drosophila grimshawi]
Length = 774
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 85/223 (38%), Gaps = 72/223 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----------HT------------------- 31
+V+L G SI+E H D E+ +ILS + HT
Sbjct: 139 QVELTGNSIFEYIHSYDQDEMNAILSLHPHMHQHPLAQTHTPIGSPNGVQHPAAYGHDRG 198
Query: 32 -EDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
I +++ F+R+KC L RN + + +KVIHC+G+L P
Sbjct: 199 SHTIEIEKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYLKARIYPDCGDG-------- 248
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ- 149
+GS +Q+ VA+G +P + ++ L Q
Sbjct: 249 ---------QGSLVQNLG---------------------LVAVGHSLPSSSITEIKLHQN 278
Query: 150 TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
F+ + LDMK + D + G+ P I K+++ + HA D
Sbjct: 279 MFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAAD 321
>gi|158299100|ref|XP_319213.4| AGAP010058-PA [Anopheles gambiae str. PEST]
gi|157014206|gb|EAA14581.4| AGAP010058-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 90/243 (37%), Gaps = 85/243 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----------SANH-------------------- 30
+V+L G SIYE H D E+ SIL SA H
Sbjct: 137 QVELTGNSIYEYIHAYDQEEMASILALQQPHHPLACSAPHNLSTNSATPNPTNSLGTPWT 196
Query: 31 ---------TEDI------RAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQ 75
T+ + A R+ F+R++C L RN + ++ YKVIHC+G+L
Sbjct: 197 GTFQVGSLATDSVYNEASCEAPRNFFLRMRCVLAK--RNAGLTSSGYKVIHCSGYLKARV 254
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE 135
P ++S NT +Q+ VA+G
Sbjct: 255 FP---------------HESLNTPGYCCVQNLG---------------------LVAVGH 278
Query: 136 PIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSF 194
+ A +V L Q F+ + SLDMK Y D + G+ P I +++ + HA D
Sbjct: 279 SLSPSAATEVKLQQNMFMFRASLDMKLIYLDAKVSQLTGYEPQDLIENTLYQYIHALDVV 338
Query: 195 HIQ 197
++
Sbjct: 339 QVR 341
>gi|390359226|ref|XP_783845.2| PREDICTED: uncharacterized protein LOC578593 isoform 2
[Strongylocentrotus purpuratus]
Length = 947
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 88/247 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------------------ANHT----------- 31
+V+LMG S+++ HP DH+E+ L N T
Sbjct: 204 QVELMGCSVFDYVHPGDHAELAEQLGMKLPPNKTSSSSPSSTNADGNSTSGSGAGSPAAI 263
Query: 32 ------EDI---------RAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
+D+ R +RS IR+K TLT +G V+ K++ YKVIH TG L
Sbjct: 264 GPSAIQDDVTLNMTASSDRIERSFLIRMKSTLTKRG--VHFKSSGYKVIHVTGAL----- 316
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP 136
R + + P +G FVA+G
Sbjct: 317 -----------------------RPELSLSQYNHHPPNVLG------------FVAVGYS 341
Query: 137 IPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
+P P +V L T F+ K LD T+ + + DFL + D I KS + + HAQD +
Sbjct: 342 LPPPTISEVRLDPTMFMCKVDLDFTITFCEAKIGDFLDHSADSVIGKSFYSYIHAQDIAN 401
Query: 196 IQNAFKN 202
++ + ++
Sbjct: 402 VRTSHQD 408
>gi|390359228|ref|XP_003729433.1| PREDICTED: uncharacterized protein LOC578593 isoform 1
[Strongylocentrotus purpuratus]
Length = 928
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 88/247 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------------------ANHT----------- 31
+V+LMG S+++ HP DH+E+ L N T
Sbjct: 185 QVELMGCSVFDYVHPGDHAELAEQLGMKLPPNKTSSSSPSSTNADGNSTSGSGAGSPAAI 244
Query: 32 ------EDI---------RAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
+D+ R +RS IR+K TLT +G V+ K++ YKVIH TG L
Sbjct: 245 GPSAIQDDVTLNMTASSDRIERSFLIRMKSTLTKRG--VHFKSSGYKVIHVTGAL----- 297
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP 136
R + + P +G FVA+G
Sbjct: 298 -----------------------RPELSLSQYNHHPPNVLG------------FVAVGYS 322
Query: 137 IPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
+P P +V L T F+ K LD T+ + + DFL + D I KS + + HAQD +
Sbjct: 323 LPPPTISEVRLDPTMFMCKVDLDFTITFCEAKIGDFLDHSADSVIGKSFYSYIHAQDIAN 382
Query: 196 IQNAFKN 202
++ + ++
Sbjct: 383 VRTSHQD 389
>gi|262477846|gb|ACY68221.1| tango [Neobellieria bullata]
Length = 312
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 73/242 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 61 DWYGTSLYEHIHPDDREKIREQLSTQESQNSGRILDLKSGTVKKEGHQSSMRLSMGARRG 120
Query: 40 VFIRLKCTLTS------------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ + K RN + Y V+HCTG+ ++N P T
Sbjct: 121 FICRMRVGNVNPESMVAGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TE 174
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE-PIPHPANY 143
M P ++ D+ GS C VAIG + A+
Sbjct: 175 MFPGVPMDRHVDDDMHGSHC------------------------CLVAIGRLQVTSTASN 210
Query: 144 DVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +F
Sbjct: 211 DISNSNNQSEFITRHAIDGKFTFVDQRVINILGYTPPELLGKICYDFFHPEDQSHMKESF 270
Query: 201 KN 202
+N
Sbjct: 271 EN 272
>gi|357611544|gb|EHJ67534.1| putative Single minded [Danaus plexippus]
Length = 256
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 22/90 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE--------------------DIRAQRSVF 41
+V+L G SIYE H DH E+ ++LS H D+ +R+ F
Sbjct: 117 QVELTGNSIYEYIHQADHEEMSAVLSLQHPHTYAGPPAVGYPVGGTWSPNVDVECERAFF 176
Query: 42 IRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
IR+KC L RN + + YKVIHC+G+L
Sbjct: 177 IRMKCVLAK--RNAGLTTSGYKVIHCSGYL 204
>gi|291225565|ref|XP_002732753.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Saccoglossus kowalevskii]
Length = 742
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 37/147 (25%)
Query: 62 YKVIHCTGHLVQNQTPAS--NGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
Y V+HCTG+ ++N PA+ + ME Q+ E S N
Sbjct: 248 YAVVHCTGY-IKNWPPAAVLASAAGMEHQEVEEAHSSN---------------------- 284
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
+C VAIG + P D+ S T F+++HS+D KFT+ D+ + LG+
Sbjct: 285 -------HYCLVAIGRLQVTSSPNCADLAGSGTPTEFISRHSMDGKFTFVDQRVTGVLGY 337
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + KS FD++H D H++++F+
Sbjct: 338 QPQELLGKSCFDYYHPDDLSHLKDSFQ 364
>gi|443697321|gb|ELT97837.1| hypothetical protein CAPTEDRAFT_180266 [Capitella teleta]
Length = 363
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 73/242 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
+ G S+Y++ H D +++ LS + +++ + ++R
Sbjct: 99 EWFGNSLYDLIHQDDVDKLREQLSTSESQNTGRILDLKTGTVKKEGHQSSMRMCMGSRRG 158
Query: 40 VFIRLKC------------TLTSKGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
IR+K T+ + RN + Y V+H TG+ ++N P
Sbjct: 159 FIIRMKIGNMPVDPMTSSHTVRIRQRNTLGPSTDGQQYAVVHVTGY-IKNWPP------- 210
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHP 140
SD + GS + + D+E T HC V IG P+
Sbjct: 211 ----------SDVSLPGSRVPQEADAEQ-----------THGHHCLVGIGRLQVTSTPNC 249
Query: 141 ANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++ P + T F+++HS+D KFT+ D+ + LG+ P + KS ++F+H +D H++
Sbjct: 250 SDLSAPNNATEFISRHSIDGKFTFIDQRVTPVLGYQPQELLGKSAYEFYHHEDQQHMKET 309
Query: 200 FK 201
F+
Sbjct: 310 FE 311
>gi|221046761|pdb|3F1N|A Chain A, Crystal Structure Of A High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains, With Internally
Bound Ethylene Glycol.
gi|221046763|pdb|3F1O|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains, With An
Internally- Bound Artificial Ligand
gi|221046765|pdb|3F1P|A Chain A, Crystal Structure Of A High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains
gi|283806888|pdb|3H7W|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains With The
Artificial Ligand Ths017
gi|283806891|pdb|3H82|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains With The
Artificial Ligand Ths020
gi|453056112|pdb|4GHI|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-terminal Pas Domains In Complex With A
Benzoxadiazole Antagonist
Length = 117
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 43/57 (75%)
Query: 148 SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 8 SKTFLSEHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 64
>gi|347964476|ref|XP_311311.5| AGAP000773-PA [Anopheles gambiae str. PEST]
gi|333467549|gb|EAA06894.5| AGAP000773-PA [Anopheles gambiae str. PEST]
Length = 1045
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 87/243 (35%), Gaps = 85/243 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-------------------------------- 29
+V+L G SIYE H D E+ S+LS
Sbjct: 117 QVELTGNSIYEYIHNYDQDEMTSVLSLQPNMYVGPPAAVYGSGPGGYGGMPQPPHHHHNH 176
Query: 30 --------------HTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQ 75
+ I +R+ F+R+KC L RN + + YKVIHC+G+L
Sbjct: 177 HHGHYHHHHHHSYGQHQTIEIERTFFLRMKCVLAK--RNAGLTTSGYKVIHCSGYLKARI 234
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE 135
P +T E I+N VA+G
Sbjct: 235 YPGD--ATYGEGHSCIQNLG----------------------------------LVAVGH 258
Query: 136 PIPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSF 194
+P A ++ L Q F+ + S+D+K + D + G+ P I K+++ + HA D
Sbjct: 259 SLPPSAITEIKLYQNMFMFRASMDLKLIFLDAKVAQLTGYEPQDLIEKTLYQYVHAADIL 318
Query: 195 HIQ 197
H++
Sbjct: 319 HMR 321
>gi|395526121|ref|XP_003775338.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 1-like [Sarcophilus harrisii]
Length = 568
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 86/237 (36%), Gaps = 85/237 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------HTEDIRA---------- 36
+V+L G S+++ HP DHSEV L H + R
Sbjct: 115 QVELTGSSVFDYVHPGDHSEVLEQLGLRATSPDLVXEGPGREAHCPETRXAPKPLALELA 174
Query: 37 -------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 175 LPVITPRSQPGSLERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL------------ 220
Query: 84 LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY 143
Q RRG A+ VA+G +P
Sbjct: 221 --------RTQLLTARRGQAL------------------------GLVALGHTLPPAPLS 248
Query: 144 DVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++PL T + + SL + + + D++ P I +S + + H +D I+ +
Sbjct: 249 ELPLHGHTLVFRLSLALTIISCESRISDYMDVGPSELIGRSCYQYIHGEDVAGIRQS 305
>gi|118344038|ref|NP_001071842.1| transcription factor protein [Ciona intestinalis]
gi|70571397|dbj|BAE06738.1| transcription factor protein [Ciona intestinalis]
Length = 753
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 56/227 (24%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV---------------KSILSANHTEDIRAQR---SVFIR 43
+VDL+G SI+ THP DH E+ ++ S++ E++ A S FIR
Sbjct: 187 QVDLIGTSIFNYTHPADHPELVDHLKNRSNSHHNITRNFHSSDKNEELEADTSSCSFFIR 246
Query: 44 LKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSA 103
+K TLT +G NVK+ YKV+H TG L S+ + + +E+ S +
Sbjct: 247 MKSTLTRRGS--NVKSIGYKVVHMTGCL----------SSKIHRRLKVEDASSD------ 288
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFT 162
D+ + + +G I + +P P D+ L Q F+ + ++
Sbjct: 289 --DETPTNLDAMLG------------LTGIAQVLPPPTLIDIKLDQPMFVVRIDASLRVN 334
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPCYSCVI 209
Y ++ +E + D ++++ F H+ D I+ C++ ++
Sbjct: 335 YCEDRIEQLTDYTMDQVKGRTLYHFIHSSDLTKIRR-----CHAAIL 376
>gi|114793377|pdb|2A24|A Chain A, Haddock Structure Of Hif-2aARNT PAS-B Heterodimer
Length = 107
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 42/56 (75%)
Query: 149 QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 1 KTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 56
>gi|322792398|gb|EFZ16382.1| hypothetical protein SINV_11317 [Solenopsis invicta]
Length = 574
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 97/246 (39%), Gaps = 67/246 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANH-----------TEDIRAQRSVFIRLKCTLTSKG 52
D G S+Y HP D +V+ LSA T ++ + +RL C + +G
Sbjct: 65 DWFGTSLYSQVHPDDTEKVREQLSAAEPQHGGRVLDLKTGTVKKEGQSSMRL-CMGSRRG 123
Query: 53 RNVNVKAAT-------------------------------YKVIHCTGHLVQNQTPASNG 81
+K Y V+HCTG+ ++N P +
Sbjct: 124 FICRMKVGNLQTTGDMAAAHGLHRMKQRNSLGPPARDGQNYAVVHCTGY-IKNWPPTGDF 182
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIG--EPIP 138
T P + ++S +Q D E +HC VAIG +
Sbjct: 183 VTPCVPGVGLGDRS-------GVQTGPDGVDENAS----------THCCLVAIGRLQVTS 225
Query: 139 HPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P N D+ S + F+++HS++ KFT+ D+ + LG+ P + ++ +DF H D H
Sbjct: 226 TPNNSDLAGSNSNSEFISRHSVEGKFTFVDQRVSGILGYAPSELLGRACYDFCHGDDRAH 285
Query: 196 IQNAFK 201
+Q +F+
Sbjct: 286 MQESFE 291
>gi|291290509|dbj|BAI82610.1| brain and muscle ARNT-like protein 1 [Xenopus (Silurana)
tropicalis]
Length = 615
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 73/238 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 184 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 243
Query: 39 SVFIRLKCTLTSKG-------RNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S N + K A K IH TG+L ++ P G
Sbjct: 244 SFFCRMKCNRPSVKVEDKDFPSNCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 296
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 297 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPANGE 330
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ + T ++++H++D KF + D+ LG+ P + S +++ H D H+ + K
Sbjct: 331 IRVKSTEYVSRHAIDGKFVFVDQRATAILGYLPQELLGTSCYEYFHHDDIGHLADCHK 388
>gi|427930992|pdb|4H6J|A Chain A, Identification Of Cys 255 In Hif-1 As A Novel Site For
Development Of Covalent Inhibitors Of Hif-1 ARNT PASB
DOMAIN PROTEIN-Protein Interaction
Length = 113
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 148 SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 4 SKTFLSEHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 52
>gi|301614622|ref|XP_002936788.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 [Xenopus (Silurana) tropicalis]
Length = 472
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 73/238 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 35 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 94
Query: 39 SVFIRLKCTLTSKG-------RNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S N + K A K IH TG+L ++ P G
Sbjct: 95 SFFCRMKCNRPSVKVEDKDFPSNCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 147
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 148 ------------------DEDNEPDNEGCNLS--------CLVAIGRLHPHIVPQPANGE 181
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ + T ++++H++D KF + D+ LG+ P + S +++ H D H+ + K
Sbjct: 182 IRVKSTEYVSRHAIDGKFVFVDQRATAILGYLPQELLGTSCYEYFHHDDIGHLADCHK 239
>gi|391328040|ref|XP_003738501.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator homolog [Metaseiulus occidentalis]
Length = 729
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 42/146 (28%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N +P+ N + D+ GS
Sbjct: 323 YAVVHCTGY-IKNWSPSGN-------------RLDHDELGSGG----------------- 351
Query: 122 VVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFN 175
SHC VAIG + P N D+ S + FL++HSLD KFT+ D+ + + LG+
Sbjct: 352 -----SHCCLVAIGRLQVTSTPNNADLMGSNSSNEFLSRHSLDGKFTFVDQRVSNILGYQ 406
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + KS FD+ H ++ H+++ F+
Sbjct: 407 PQELLGKSCFDYCHPEEQAHMKDHFE 432
>gi|283806656|ref|NP_001164574.1| cycle [Acyrthosiphon pisum]
gi|283483352|emb|CAX37106.1| cycle [Acyrthosiphon pisum]
Length = 648
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 57/245 (23%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILS------------ANHTEDIRAQ----------- 37
M DL+G ++++ HP D ++VK LS AN RA+
Sbjct: 178 MPEDLVGNNVFDYIHPKDVAKVKEQLSCSDFGPRDKYINANTMLPARAEMMNTLSKMCSG 237
Query: 38 --RSVFIRLKCTL--------TSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEP 87
RS F R+KC + T+ G Y VI CTG+L +P
Sbjct: 238 ARRSFFCRMKCKVYDIKEEADTTTGSKYTQSDRRYNVIQCTGYL--------------KP 283
Query: 88 QDNIENQSDNTRRGSAI-QDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY--- 143
I D + + + +D D + + G + + C VA+G I + A+
Sbjct: 284 WTQINECEDVSGKSLGLDEDNDGNGVGGDSGSPKN-----TSCLVAVGRIINNLASSSLL 338
Query: 144 -DVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
D+ F +KH++D KF D+ + +GF P + S++++ H D + N K
Sbjct: 339 SDIVKPPCFTSKHTIDGKFLSVDQRVTYIVGFLPQELLGTSMYEYFHQDDIARLVNIHKA 398
Query: 203 PCYSC 207
C
Sbjct: 399 TLQEC 403
>gi|203285566|gb|ACH97371.1| tango [Ceratitis capitata]
Length = 311
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 98/242 (40%), Gaps = 73/242 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQ 37
+ D G S+YE HP D +++ LS +++ + A+
Sbjct: 59 QTDWYGTSLYEHIHPDDREKIREQLSTQESQNTGRILDLKTGTVKKEGHQSSMRLSMGAR 118
Query: 38 RSVFIRLKCTLTS------------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGS 82
R R++ + K RN + Y V+HCTG+ ++N P
Sbjct: 119 RGFICRMRVGNVNPDSMVAGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP----- 172
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE-PIPHPA 141
T M P ++E D+ S C VAIG + A
Sbjct: 173 TDMFPGVHMERPVDDDMHASHC------------------------CLVAIGRLQVTSTA 208
Query: 142 NYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQN 198
+ D+ S F+T+H++D KFT+ D+ + + LG++P + K +DF HA+D ++++
Sbjct: 209 SNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGYSPTDLLGKICYDFCHAEDQMNVKD 268
Query: 199 AF 200
+F
Sbjct: 269 SF 270
>gi|113197972|gb|AAI20886.1| Npas3 protein [Mus musculus]
Length = 893
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS TED +
Sbjct: 163 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASSASSSSQSETPEPV 222
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 223 ETTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 279
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 280 TV---------------------------PSQIMG------------LVVVAHALPPPTI 300
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 301 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 351
>gi|194744566|ref|XP_001954764.1| GF18433 [Drosophila ananassae]
gi|190627801|gb|EDV43325.1| GF18433 [Drosophila ananassae]
Length = 648
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNSDSMVSGHLNRLKQRNSLGPSRDGSNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|154090947|ref|NP_038808.2| neuronal PAS domain-containing protein 3 [Mus musculus]
gi|189442119|gb|AAI67248.1| Neuronal PAS domain protein 3 [synthetic construct]
Length = 925
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS TED +
Sbjct: 191 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASSASSSSQSETPEPV 250
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 251 ETTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 307
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 308 TV---------------------------PSQIMG------------LVVVAHALPPPTI 328
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 329 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 379
>gi|392348827|ref|XP_003750208.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3 [Rattus norvegicus]
Length = 931
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS TED +
Sbjct: 197 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASSASSSSQSETPEPV 256
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 257 ETTSPGLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 313
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 314 TV---------------------------PSQIMG------------LVVVAHALPPPTI 334
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 335 NEVRIDCHMFVTRVNMDLNIIYCENRITDYMDLTPVDIVGKRCYHFIHAED 385
>gi|380749783|gb|AFE48634.1| single-minded protein, partial [Euperipatoides kanangrensis]
Length = 199
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 24/96 (25%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH----------------------TEDIRAQRS 39
+V+L G SIYE HP DH E+ +IL+ + D +RS
Sbjct: 82 QVELTGNSIYEYIHPADHDEMTAILTMHQPCHHSHHALQGSILPEEAYSPRALDFEIERS 141
Query: 40 VFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQ 75
F+R+KC L RN + + YKVIHC+G+L Q
Sbjct: 142 FFLRMKCVLAK--RNAGLTSGGYKVIHCSGYLKIKQ 175
>gi|195572389|ref|XP_002104178.1| GD20825 [Drosophila simulans]
gi|194200105|gb|EDX13681.1| GD20825 [Drosophila simulans]
Length = 424
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|405967670|gb|EKC32806.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Crassostrea gigas]
Length = 698
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 71/239 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA--------------------NHTEDIR----AQ 37
+ D G S+Y++ HP D +V+ LS +H IR ++
Sbjct: 199 QADWFGNSMYDLVHPDDVEKVREQLSTTESQNTGRILDLKTGTVKKDSHQTSIRLCMGSR 258
Query: 38 RSVFIRLK----------CTLTSKGRNVNVKAAT-----YKVIHCTGHLVQNQTPASNGS 82
R R+K + T + R N + Y V+H TG+ ++N P S
Sbjct: 259 RGFICRMKMGNMEVNTMSASHTHRARQRNTLGPSPDGNHYTVVHVTGY-IKNWPP----S 313
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ +D+ EN S + VG R VT +C +G
Sbjct: 314 GVQMDRDSDENSSTHCCL---------------VGIGRLQVTSTPNCSDLMG-------- 350
Query: 143 YDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
P T F+++H++D KFT+ D+ + LG+ P + K+ FDF+H +D H+++ F
Sbjct: 351 ---PNGGTEFISRHNMDGKFTFVDQRVTAVLGYQPADLLGKTAFDFYHPEDKAHMKDTF 406
>gi|2367597|gb|AAB69695.1| aryl hydrocarbon receptor nuclear translocator-like protein
[Drosophila melanogaster]
Length = 631
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|224096024|ref|XP_002194313.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 [Taeniopygia guttata]
Length = 625
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 97/239 (40%), Gaps = 76/239 (31%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----------------HTE--------DIRA 36
+ L+GQS+++ HP D ++VK LS++ HT+ + A
Sbjct: 205 QASLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKTGLQVHTDFQAGPARLNSGA 264
Query: 37 QRSVFIRLKCTLTSKGRN---VNVKAA---TYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
+RS F R+KC+ T+ N K Y IHCTG+L +N P G +E +++
Sbjct: 265 RRSFFCRIKCSRTTVKEEECLPNPKKKDHRKYCTIHCTGYL-KNWPPNEVG---VEEEND 320
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL--- 147
+E S N +C VAIG HP Y VP
Sbjct: 321 VEKDSSNF-----------------------------NCLVAIGRL--HP--YIVPQKSG 347
Query: 148 -----SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ ++D KF Y D+ LG+ P + S +++ H D H+ K
Sbjct: 348 EIKVKATEFVTRFAMDGKFVYVDQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHK 406
>gi|58700545|gb|AAW80970.1| BMAL1 [Xenopus laevis]
Length = 627
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 191 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 250
Query: 39 SVFIRLKCTLTSKG-------RNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S N + K A K IH TG+L ++ P G
Sbjct: 251 SFFCRMKCNRPSVKVENKDFPSNCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 303
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 304 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPANGE 337
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ LG+ P + S +++ H D H+
Sbjct: 338 IRVKSTEYVSRHAVDGKFVFVDQRATAILGYLPQELLGTSCYEYFHHDDIGHL 390
>gi|45383840|ref|NP_989464.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
[Gallus gallus]
gi|82244306|sp|Q8QGQ7.1|BMAL2_CHICK RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 2; AltName: Full=Brain and muscle ARNT-like 2;
Short=cBMAL2
gi|19773560|gb|AAL98707.1|AF246958_1 BMAL2 [Gallus gallus]
Length = 622
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 77/240 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----------------HTE--------DIRA 36
+ L+GQS+++ HP D ++VK LS++ HT+ + A
Sbjct: 204 QTSLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKTGLQVHTDFQAGPARLNSGA 263
Query: 37 QRSVFIRLKCTLTSKGRNV----NVKAA---TYKVIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+KC+ T+ N K Y IHCTG++ +N P+ G +E ++
Sbjct: 264 RRSFFCRIKCSRTTVKEEKECLPNPKKKDHRKYCTIHCTGYM-KNWPPSEVG---VEEEN 319
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-- 147
++E S N +C VAIG HP Y VP
Sbjct: 320 DVEKNSSNF-----------------------------NCLVAIGRL--HP--YIVPQKS 346
Query: 148 ------SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ ++D KF Y D+ LG+ P + S +++ H D H+ K
Sbjct: 347 GEIKVKATEFVTRFAMDGKFVYVDQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHK 406
>gi|395745779|ref|XP_002824709.2| PREDICTED: neuronal PAS domain-containing protein 3 [Pongo abelii]
Length = 962
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS TED +
Sbjct: 216 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDGASSASSSSQSETPEPV 275
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 276 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 332
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 333 TV---------------------------PSQIMG------------LVVVAHALPPPTI 353
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 354 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 404
>gi|326912421|ref|XP_003202550.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Meleagris gallopavo]
Length = 604
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 77/240 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----------------HTE--------DIRA 36
+ L+GQS+++ HP D ++VK LS++ HT+ + A
Sbjct: 186 QASLIGQSLFDYLHPKDVAKVKEQLSSSDISPREKLVDGKTGLQVHTDFQAGPARLNSGA 245
Query: 37 QRSVFIRLKCTLTSKGRNV----NVKAA---TYKVIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+KC+ T+ N K Y IHCTG++ +N P+ G +E ++
Sbjct: 246 RRSFFCRIKCSRTTVKEEKECLPNPKKKDHRKYCTIHCTGYM-KNWPPSEVG---VEEEN 301
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-- 147
++E S N +C VAIG HP Y VP
Sbjct: 302 DVEKNSSNF-----------------------------NCLVAIGRL--HP--YIVPQKS 328
Query: 148 ------SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ ++D KF Y D+ LG+ P + S +++ H D H+ K
Sbjct: 329 GEIKVKATEFVTRFAMDGKFVYVDQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHK 388
>gi|148229316|ref|NP_001089024.1| aryl hydrocarbon receptor nuclear translocator-like [Xenopus
laevis]
gi|50603758|gb|AAH78042.1| ARNTL protein [Xenopus laevis]
Length = 627
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 191 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 250
Query: 39 SVFIRLKCTLTSKG-------RNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S N + K A K IH TG+L ++ P G
Sbjct: 251 SFFCRMKCNRPSVKVENKDFPSNCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 303
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 304 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPANGE 337
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ LG+ P + S +++ H D H+
Sbjct: 338 IRVKSTEYVSRHAVDGKFVFVDQRATAILGYLPQELLGTSCYEYFHHDDIGHL 390
>gi|392340999|ref|XP_003754219.1| PREDICTED: neuronal PAS domain-containing protein 3 [Rattus
norvegicus]
Length = 816
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS TED +
Sbjct: 82 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASSASSSSQSETPEPV 141
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 142 ETTSPGLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 198
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 199 TV---------------------------PSQIMG------------LVVVAHALPPPTI 219
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 220 NEVRIDCHMFVTRVNMDLNIIYCENRITDYMDLTPVDIVGKRCYHFIHAED 270
>gi|195499307|ref|XP_002096893.1| GE24803 [Drosophila yakuba]
gi|194182994|gb|EDW96605.1| GE24803 [Drosophila yakuba]
Length = 641
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|2688932|gb|AAB88882.1| basic helix-loop-helix PAS protein [Drosophila melanogaster]
gi|5052000|gb|AAD38396.1| hypoxia-inducible factor 1b [Drosophila melanogaster]
Length = 644
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|24645243|ref|NP_731308.1| tango, isoform A [Drosophila melanogaster]
gi|442618130|ref|NP_001262397.1| tango, isoform B [Drosophila melanogaster]
gi|380865479|sp|O15945.3|ARNT_DROME RecName: Full=Aryl hydrocarbon receptor nuclear translocator
homolog; Short=dARNT; AltName: Full=Hypoxia-inducible
factor 1-beta; AltName: Full=Protein tango
gi|7299130|gb|AAF54329.1| tango, isoform A [Drosophila melanogaster]
gi|17862498|gb|AAL39726.1| LD32037p [Drosophila melanogaster]
gi|440217228|gb|AGB95779.1| tango, isoform B [Drosophila melanogaster]
Length = 642
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|2547046|dbj|BAA22868.1| bHLH-PAS transcription factor [Drosophila melanogaster]
Length = 642
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|194903468|ref|XP_001980874.1| GG17399 [Drosophila erecta]
gi|190652577|gb|EDV49832.1| GG17399 [Drosophila erecta]
Length = 645
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|195330520|ref|XP_002031951.1| GM26289 [Drosophila sechellia]
gi|194120894|gb|EDW42937.1| GM26289 [Drosophila sechellia]
Length = 634
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ ++ S K RN + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMS---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|291222897|ref|XP_002731454.1| PREDICTED: neuronal PAS domain protein 3-like [Saccoglossus
kowalevskii]
Length = 962
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 47/198 (23%)
Query: 13 VTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLV 72
V+ P + +SAN R +RS F+RLK TLT +G V++K++ YKV+ +G L
Sbjct: 237 VSSPIPLQGMTMTMSANP----RYERSFFLRLKSTLTKRG--VHIKSSGYKVVQISGRL- 289
Query: 73 QNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVA 132
R I +P +G FVA
Sbjct: 290 ---------------------------RPRMILTHTQRQPITIIG------------FVA 310
Query: 133 IGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQ 191
+ +P P ++ + F+ K ++D+K + D + F+ F + KS +DF HA+
Sbjct: 311 LAHALPSPTINEIRIECDLFVCKANMDLKIAFCDSRISQFMDFTASDVLGKSFYDFLHAE 370
Query: 192 DSFHIQNAFKNPCYSCVI 209
D ++++ + YS +
Sbjct: 371 DIAAMRDSHADCKYSLSV 388
>gi|350586876|ref|XP_003356744.2| PREDICTED: neuronal PAS domain-containing protein 3, partial [Sus
scrofa]
Length = 221
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 82/238 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 23 EVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 82
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 83 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 139
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 140 TV---------------------------PSQIMG------------LVVVAHALPPPTI 160
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D I+++
Sbjct: 161 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHS 218
>gi|327273517|ref|XP_003221527.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Anolis carolinensis]
Length = 602
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 69/233 (29%)
Query: 5 LMGQSIYEVTHPCDHSEVKSILSAN-----------------HTE--------DIRAQRS 39
L+GQS+++ HP D ++VK LSA+ HT+ A+RS
Sbjct: 185 LIGQSLFDYLHPKDVAKVKEQLSASDALPREKLIDTKTGLQVHTDFQAGSSRLHSGARRS 244
Query: 40 VFIRLKCTLTS-KGRNVNVKAAT------YKVIHCTGHLVQNQTPASNGSTLMEPQDNIE 92
F R+KCT + K N ++ +T Y +HCTG+L ++ P G +E
Sbjct: 245 FFCRIKCTRNNIKVENESLPNSTKKDHKKYLTVHCTGYL-KSWPPNEVG---------VE 294
Query: 93 NQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDVPLS 148
++D + S+ +C VAIG +P +N
Sbjct: 295 EENDAEKDSSSF-----------------------NCLVAIGRLHPYTVPQKSNEIKVKP 331
Query: 149 QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
F+T+ ++D KF + D+ LG+ P + S +++ H D H+ K
Sbjct: 332 TEFVTRFAMDGKFVFVDQRATAILGYLPQELLGTSCYEYFHQDDHSHLTEKHK 384
>gi|334328713|ref|XP_001373287.2| PREDICTED: neuronal PAS domain-containing protein 1 [Monodelphis
domestica]
Length = 611
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 87/239 (36%), Gaps = 87/239 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----------------------------ANHTE 32
+V+L G S+++ HP DHSEV L A TE
Sbjct: 168 QVELTGSSVFDYVHPGDHSEVLEQLGLKAPPPGPGAPLYGPSSSSSSSSASSNSEAPETE 227
Query: 33 ------DIRAQ-----RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNG 81
R Q RS FIR+K TLT +G +++KA+ YKVIH TG L
Sbjct: 228 LGPPVLTPRNQPGLLDRSFFIRMKSTLTKRG--LHLKASGYKVIHVTGRL---------- 275
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPA 141
Q TRRG + VA+G +P
Sbjct: 276 ----------RTQLLTTRRGQVL------------------------GLVALGHTLPPAP 301
Query: 142 NYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++PL T + + SL + + + D++ P I +S + F H +D ++ +
Sbjct: 302 LSELPLHGHTLVFRLSLALTIISCESRISDYMDVGPSELIGRSCYQFIHGEDVAGVRQS 360
>gi|403264844|ref|XP_003924677.1| PREDICTED: neuronal PAS domain-containing protein 3 [Saimiri
boliviensis boliviensis]
Length = 841
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 258 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 317
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 318 ESTSPSLLTTDNALERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 374
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 375 TV---------------------------PSQIMG------------LVVVAHALPPPTI 395
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 396 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 446
>gi|348527488|ref|XP_003451251.1| PREDICTED: neuronal PAS domain-containing protein 3-like
[Oreochromis niloticus]
Length = 1273
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 43/164 (26%)
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSD 96
+RS FIR+K TLT +G V++K++ YKVIH TG L I
Sbjct: 545 ERSFFIRMKSTLTKRG--VHIKSSGYKVIHVTGRL------------------RIRMALT 584
Query: 97 NTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS-QTFLTKH 155
++R S P + +G VA+ +P P +V + Q F+T+
Sbjct: 585 HSR----------SVPNQIMG------------MVAVAHALPPPTINEVRIDCQMFVTRV 622
Query: 156 SLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++D+K Y + + D++ P + K + F HA+D I+ +
Sbjct: 623 NMDLKIVYCENRISDYMDLTPVDIVGKRCYQFIHAEDVEGIRQS 666
>gi|395503613|ref|XP_003756158.1| PREDICTED: neuronal PAS domain-containing protein 3 [Sarcophilus
harrisii]
Length = 876
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 82/232 (35%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA------------- 36
++V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 172 VQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEP 231
Query: 37 ---------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNG 81
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 232 VESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHG 288
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPA 141
T+ P + +G V + +P P
Sbjct: 289 RTV---------------------------PSQIMG------------LVVVAHALPPPT 309
Query: 142 NYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 310 INEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 361
>gi|203285606|gb|ACH97391.1| tango [Ceratitis oraria]
Length = 151
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N PA M P ++E D+ S
Sbjct: 23 GTNYAVVHCTGY-IKNWPPAD-----MFPGVHMERPVDDDMHASHC-------------- 62
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 63 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 112
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 113 SPTDLLGKICYDFCHAEDQMNVKDSF 138
>gi|125778103|ref|XP_001359833.1| GA11313 [Drosophila pseudoobscura pseudoobscura]
gi|195157472|ref|XP_002019620.1| GL12493 [Drosophila persimilis]
gi|54639583|gb|EAL28985.1| GA11313 [Drosophila pseudoobscura pseudoobscura]
gi|194116211|gb|EDW38254.1| GL12493 [Drosophila persimilis]
Length = 646
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKCTLTS------------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ S K RN + + V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVSSDSMVSGHLNRLKQRNSLGPSRDGTNFAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNMHME------------RDVDDMT---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|380805789|gb|AFE74770.1| neuronal PAS domain-containing protein 3 isoform 4, partial [Macaca
mulatta]
Length = 655
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 147 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 206
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 207 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 263
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 264 TV---------------------------PSQIMG------------LVVVAHALPPPTI 284
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 285 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 335
>gi|195395356|ref|XP_002056302.1| GJ10876 [Drosophila virilis]
gi|194143011|gb|EDW59414.1| GJ10876 [Drosophila virilis]
Length = 649
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDRDKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKCTLTS------------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ + K RN + + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPDAMVSGHLNRLKQRNSLGPSRDGSNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNVHME------------RDVDDMA---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H+LD KFT+ D+ + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMTGSNNQSEFITRHALDGKFTFVDQRVLHILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|410962132|ref|XP_003987629.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3 [Felis catus]
Length = 811
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 192 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 251
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 252 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 308
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 309 TV---------------------------PSQIMG------------LVVVAHALPPPTI 329
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 330 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 380
>gi|195111536|ref|XP_002000334.1| GI10175 [Drosophila mojavensis]
gi|193916928|gb|EDW15795.1| GI10175 [Drosophila mojavensis]
Length = 653
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDRDKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKC------TLTS------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ + S K RN + + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPDAMVSGHLNRLKQRNSLGPSRDGSNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P ++E +D DD SHC VAIG + A
Sbjct: 241 MFPNVHME------------RDVDDMA---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H+LD KFT+ D+ + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMTGSNNQSEFITRHALDGKFTFVDQRVLHILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|449504391|ref|XP_002199739.2| PREDICTED: neuronal PAS domain-containing protein 3 [Taeniopygia
guttata]
Length = 986
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 260 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 319
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 320 ESTNPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 376
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 377 TV---------------------------PSQIMG------------LVVVAHALPPPTI 397
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 398 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 448
>gi|345306264|ref|XP_001512327.2| PREDICTED: neuronal PAS domain-containing protein 3-like
[Ornithorhynchus anatinus]
Length = 633
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 181 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGAAEDGASSASSSSQSETPEPV 240
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 241 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 297
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 298 TV---------------------------PSQIMG------------LVVVAHALPPPTI 318
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 319 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 369
>gi|338717972|ref|XP_003363735.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3-like [Equus caballus]
Length = 828
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 175 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 234
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 235 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 291
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 292 TV---------------------------PSQIMG------------LVVVAHALPPPTI 312
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 313 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 363
>gi|426248830|ref|XP_004018161.1| PREDICTED: neuronal PAS domain-containing protein 3 [Ovis aries]
Length = 906
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 218 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 277
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 278 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 334
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 335 TV---------------------------PSQIMG------------LVVVAHALPPPTI 355
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 356 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 406
>gi|397501192|ref|XP_003821275.1| PREDICTED: neuronal PAS domain-containing protein 3 [Pan paniscus]
Length = 841
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 174 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 233
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 234 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 290
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 291 TV---------------------------PSQIMG------------LVVVAHALPPPTI 311
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 312 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 362
>gi|345803910|ref|XP_003435125.1| PREDICTED: neuronal PAS domain-containing protein 3 [Canis lupus
familiaris]
Length = 910
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 174 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGAAEDGASSASSSSQSETPEPV 233
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 234 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 290
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 291 TV---------------------------PSQIMG------------LVVVAHALPPPTI 311
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 312 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 362
>gi|170048706|ref|XP_001870745.1| single-minded [Culex quinquefasciatus]
gi|167870723|gb|EDS34106.1| single-minded [Culex quinquefasciatus]
Length = 802
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 39/168 (23%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
++ I +R+ F+R+KC L RN + + YKVIHC+G+ P ST +
Sbjct: 288 SQTIEIERTFFLRMKCVLAK--RNAGLTTSGYKVIHCSGYTKARIYPGD--STYGDGHSC 343
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT 150
I+N VA+G +P A ++ L Q
Sbjct: 344 IQNLG----------------------------------LVAVGHSLPPSAITEIKLHQN 369
Query: 151 -FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQ 197
F+ + S+D+K + D + G+ P I K+++ + HA D ++
Sbjct: 370 MFMFRASMDLKLIFLDAKVAQLTGYEPQDLIEKTLYQYIHAADILQMR 417
>gi|426376664|ref|XP_004055115.1| PREDICTED: neuronal PAS domain-containing protein 3 [Gorilla
gorilla gorilla]
Length = 878
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 193 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 252
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 253 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 309
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 310 TV---------------------------PSQIMG------------LVVVAHALPPPTI 330
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 331 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 381
>gi|126281959|ref|XP_001363671.1| PREDICTED: neuronal PAS domain-containing protein 3 isoform 2
[Monodelphis domestica]
Length = 938
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 191 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 250
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 251 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 307
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 308 TV---------------------------PSQIMG------------LVVVAHALPPPTI 328
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 329 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 379
>gi|203285602|gb|ACH97389.1| tango [Ceratitis flexuosa]
Length = 137
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 15 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPGDDDMHASHC-------------- 54
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 55 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 104
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 105 SPTDLLGKICYDFCHAEDQMNVKDSF 130
>gi|262477854|gb|ACY68225.1| tango [Ctenocephalides felis]
Length = 310
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 41/146 (28%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N P + +Q D + EEE+
Sbjct: 159 YAVVHCTGY-IKNWPP------------------------TGVQM--DRQTEEEL----- 186
Query: 122 VVTEPSHC-FVAIGE-PIPHPANY-DVPLSQT---FLTKHSLDMKFTYADETMEDFLGFN 175
SHC VAIG + AN D+ S + F+T+HSLD KF++ D+ + + LG++
Sbjct: 187 ---HASHCCLVAIGRLQVTSTANTSDLSGSHSQSEFITRHSLDGKFSFIDQRVMNLLGYS 243
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFK 201
P KS FDF H +D H++ F+
Sbjct: 244 PPELFGKSCFDFFHPEDQSHMKENFE 269
>gi|363734502|ref|XP_421232.3| PREDICTED: neuronal PAS domain-containing protein 3 [Gallus gallus]
Length = 1034
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 312 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 371
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 372 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 428
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 429 TV---------------------------PSQIMG------------LVVVAHALPPPTI 449
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 450 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 500
>gi|332842053|ref|XP_509895.3| PREDICTED: neuronal PAS domain-containing protein 3 [Pan
troglodytes]
Length = 937
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 193 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 252
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 253 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 309
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 310 TV---------------------------PSQIMG------------LVVVAHALPPPTI 330
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 331 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 381
>gi|203285592|gb|ACH97384.1| tango [Ceratitis rubivora]
Length = 151
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 23 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPGDDDMHASHC-------------- 62
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 63 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 112
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 113 SPTDLLGKICYDFCHAEDQMNVKDSF 138
>gi|296475377|tpg|DAA17492.1| TPA: neuronal PAS domain protein 3 [Bos taurus]
Length = 933
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 183 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 242
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 243 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 299
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 300 TV---------------------------PSQIMG------------LVVVAHALPPPTI 320
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 321 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 371
>gi|203285586|gb|ACH97381.1| tango [Ceratitis anonae]
gi|203285588|gb|ACH97382.1| tango [Ceratitis fasciventris]
gi|203285590|gb|ACH97383.1| tango [Ceratitis rosa]
gi|203285598|gb|ACH97387.1| tango [Ceratitis penicillata]
Length = 156
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 28 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPGDDDMHASHC-------------- 67
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 68 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 117
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 118 SPTDLLGKICYDFCHAEDQMNVKDSF 143
>gi|395838298|ref|XP_003792053.1| PREDICTED: neuronal PAS domain-containing protein 3 [Otolemur
garnettii]
Length = 915
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 174 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGAAEDGASSASSSSQSETPEPV 233
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 234 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 290
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 291 TV---------------------------PSQIMG------------LVVVAHALPPPTI 311
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 312 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 362
>gi|203285608|gb|ACH97392.1| tango [Ceratitis simi]
Length = 155
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E Q D+ S
Sbjct: 27 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERQVDDDMHSSHC-------------- 66
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 67 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 116
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF H +D +++++F
Sbjct: 117 SPTDLLGKICYDFCHXEDQMNVKDSF 142
>gi|61652854|gb|AAX48004.1| hypoxia-inducible factor 1alpha [Pusa hispida]
Length = 58
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 148 SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 4 SKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 52
>gi|402875930|ref|XP_003901744.1| PREDICTED: neuronal PAS domain-containing protein 3 [Papio anubis]
Length = 961
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 216 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 275
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 276 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 332
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 333 TV---------------------------PSQIMG------------LVVVAHALPPPTI 353
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 354 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 404
>gi|359077866|ref|XP_002696766.2| PREDICTED: neuronal PAS domain-containing protein 3 [Bos taurus]
Length = 935
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 185 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 244
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 245 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 301
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 302 TV---------------------------PSQIMG------------LVVVAHALPPPTI 322
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 323 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 373
>gi|203285594|gb|ACH97385.1| tango [Ceratitis sp. Kenya 'CO']
Length = 133
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 11 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPGDDDMHASHC-------------- 50
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 51 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 100
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 101 SPTDLLGKICYDFCHAEDQMNVKDSF 126
>gi|390468991|ref|XP_002753842.2| PREDICTED: neuronal PAS domain-containing protein 3 isoform 1
[Callithrix jacchus]
Length = 939
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 193 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 252
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 253 ESTSPSLLTTDNALERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 309
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 310 TV---------------------------PSQIMG------------LVVVAHALPPPTI 330
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 331 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 381
>gi|260064030|ref|NP_001159365.1| neuronal PAS domain-containing protein 3 isoform 4 [Homo sapiens]
gi|12328445|dbj|BAB21221.1| NPAS3 (MOP6) [Homo sapiens]
gi|208966854|dbj|BAG73441.1| neuronal PAS domain protein 3 [synthetic construct]
Length = 903
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 156 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 215
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 216 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 272
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 273 TV---------------------------PSQIMG------------LVVVAHALPPPTI 293
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 294 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 344
>gi|305682540|dbj|BAJ16354.1| CYCLE [Thermobia domestica]
Length = 644
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 84/255 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 173 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGLSRLCPGARR 232
Query: 39 SVFIRLKCTL---------TSKGRNVNVKAAT----YKVIHCTGHLVQNQTPASNGSTLM 85
S F R++C + T+ G + K+ + Y VI CTG+L ++ PA G
Sbjct: 233 SFFCRMRCKVAPFVKEEADTTTGCHRRKKSQSSDRKYCVIQCTGYL-KSWAPAKIG---- 287
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDV 145
I++Q + D D T C VA+G P + +
Sbjct: 288 -----IQDQGTDG-------DGD---------------TCNLSCLVAVGRLQPLLFSSGL 320
Query: 146 PLSQT--------------FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQ 191
PL + F+++H++D KF + D+ LGF P + S+++++H
Sbjct: 321 PLGEGLRKGGRFPNIRTIEFISRHAMDGKFLFVDQRATLVLGFLPQELLGSSMYEYYHHD 380
Query: 192 DSFHIQNAFKNPCYS 206
D H+ + K S
Sbjct: 381 DIPHLAESHKAALQS 395
>gi|297297656|ref|XP_001108628.2| PREDICTED: neuronal PAS domain-containing protein 3 [Macaca
mulatta]
Length = 936
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 193 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 252
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 253 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 309
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 310 TV---------------------------PSQIMG------------LVVVAHALPPPTI 330
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 331 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 381
>gi|440903756|gb|ELR54370.1| Neuronal PAS domain-containing protein 3, partial [Bos grunniens
mutus]
Length = 919
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 170 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 229
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 230 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 286
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 287 TV---------------------------PSQIMG------------LVVVAHALPPPTI 307
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 308 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 358
>gi|203285596|gb|ACH97386.1| tango [Ceratitis sp. Kenya 'ST']
Length = 140
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 12 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPGDDDMHASHC-------------- 51
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 52 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 101
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 102 SPTDLLGKICYDFCHAEDQMNVKDSF 127
>gi|260064034|ref|NP_001158221.1| neuronal PAS domain-containing protein 3 isoform 1 [Homo sapiens]
gi|38604888|sp|Q8IXF0.1|NPAS3_HUMAN RecName: Full=Neuronal PAS domain-containing protein 3;
Short=Neuronal PAS3; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP6; AltName:
Full=Class E basic helix-loop-helix protein 12;
Short=bHLHe12; AltName: Full=Member of PAS protein 6;
AltName: Full=PAS domain-containing protein 6
gi|27372861|dbj|BAC53756.1| NPAS3 [Homo sapiens]
Length = 933
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 186 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 245
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 246 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 302
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 303 TV---------------------------PSQIMG------------LVVVAHALPPPTI 323
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 324 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 374
>gi|11545847|ref|NP_071406.1| neuronal PAS domain-containing protein 3 isoform 2 [Homo sapiens]
gi|11415003|gb|AAG35180.1|AF164438_1 basic-helix-loop-helix-PAS protein [Homo sapiens]
Length = 901
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 154 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 213
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 214 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 270
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 271 TV---------------------------PSQIMG------------LVVVAHALPPPTI 291
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 292 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 342
>gi|41281831|ref|NP_775182.1| neuronal PAS domain-containing protein 3 isoform 3 [Homo sapiens]
gi|27372857|dbj|BAC53754.1| NPAS3 variant [Homo sapiens]
gi|148921820|gb|AAI46318.1| Neuronal PAS domain protein 3 [synthetic construct]
Length = 920
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 173 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 232
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 233 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 289
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 290 TV---------------------------PSQIMG------------LVVVAHALPPPTI 310
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 311 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 361
>gi|119586334|gb|EAW65930.1| neuronal PAS domain protein 3 [Homo sapiens]
Length = 903
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 156 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 215
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 216 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 272
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 273 TV---------------------------PSQIMG------------LVVVAHALPPPTI 293
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 294 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 344
>gi|6679100|ref|NP_032744.1| neuronal PAS domain-containing protein 1 [Mus musculus]
gi|3914159|sp|P97459.1|NPAS1_MOUSE RecName: Full=Neuronal PAS domain-containing protein 1;
Short=Neuronal PAS1
gi|1840054|gb|AAB47247.1| neuronal PAS1 [Mus musculus]
gi|124298116|gb|AAI32114.1| Neuronal PAS domain protein 1 [Mus musculus]
gi|148710145|gb|EDL42091.1| neuronal PAS domain protein 1 [Mus musculus]
gi|187953721|gb|AAI37864.1| Neuronal PAS domain protein 1 [Mus musculus]
Length = 594
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 85/235 (36%), Gaps = 91/235 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS--------------------------------AN 29
+V+L G S+++ HP DHSEV L A+
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRAASIGPPTPPSVSSSSSSSSSSLVDTPEIEAS 233
Query: 30 HTED---IRAQ-RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLM 85
TE RAQ RS F+R+K TLT +G +NVKA+ YKVIH TG L
Sbjct: 234 PTEASPAFRAQERSFFVRMKSTLTKRG--LNVKASGYKVIHVTGRL-------------- 277
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDV 145
R A+ VA+G +P ++
Sbjct: 278 --------------RARAL------------------------GLVALGHTLPPAPLAEL 299
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
PL + + SL + + + D + P + +S + F H QD+ I+ +
Sbjct: 300 PLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQS 354
>gi|390136659|pdb|4F3L|B Chain B, Crystal Structure Of The Heterodimeric Clock:bmal1
Transcriptional Activator Complex
Length = 387
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 126 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 185
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 186 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 238
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 239 ------------------DEDNEPDNEGCN--------LSCLVAIGRLHSHMVPQPANGE 272
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 273 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 325
>gi|118763938|gb|AAI28807.1| Arntl2 protein [Danio rerio]
Length = 631
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 74/234 (31%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-------------------A 36
+ +L+GQS+++ HP D +VK LSA+ D + A
Sbjct: 201 RTELIGQSLFDYVHPKDIGKVKEQLSASELYPRERLIDAKTGLQVQAELPVGSARLCSGA 260
Query: 37 QRSVFIRLKCT-LTSK-------GRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+RS F R+K +T K G + ++ Y +HCTG++ P +T
Sbjct: 261 RRSFFCRMKYNKITVKEEKDFQAGASKKKESQRYCTVHCTGYM--RTWPTRQLAT----- 313
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSH--CFVAIGEPIPHP---ANY 143
G A DK E SH C VA+G PH AN
Sbjct: 314 -----------EGEAEADK-----------------ESSHFSCLVAMGRVHPHTLPQANG 345
Query: 144 DVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++ + T F+T++++D KFT+ D+ LG+ P + S +++ H D H+
Sbjct: 346 EIKVKPTEFVTRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHLDDLPHL 399
>gi|30172456|gb|AAO17043.1| neuronal PAS3 transcript variant 1 [Homo sapiens]
Length = 901
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 154 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 213
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 214 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 270
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 271 TV---------------------------PSQIMG------------LVVVAHALPPPTI 291
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 292 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 342
>gi|449277560|gb|EMC85673.1| Aryl hydrocarbon receptor nuclear translocator-like protein 2,
partial [Columba livia]
Length = 606
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 95/240 (39%), Gaps = 77/240 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----------------HTE--------DIRA 36
+ L+GQS+++ HP D ++VK LS++ HT+ + A
Sbjct: 185 QASLIGQSLFDYLHPKDVAKVKEQLSSSDVSPKEKLVDGKTGLQVHTDFQAGPARLNSGA 244
Query: 37 QRSVFIRLKCTLTSKGRNV----NVKAA---TYKVIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+KC T+ N K Y IHCTG++ +N P G +E +
Sbjct: 245 RRSFFCRIKCCRTAVKEEKECLPNPKKKDHRKYCTIHCTGYM-KNWPPNEVG---VEEET 300
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-- 147
+IE S N +C VAIG HP Y VP
Sbjct: 301 DIEKNSSNF-----------------------------NCLVAIGRL--HP--YIVPQKS 327
Query: 148 ------SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ ++D KF Y D+ LG+ P + S +++ H D H+ K
Sbjct: 328 GEIKVKATEFVTRFTMDGKFVYVDQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHK 387
>gi|444722495|gb|ELW63187.1| Neuronal PAS domain-containing protein 3 [Tupaia chinensis]
Length = 883
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 82 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 141
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 142 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 198
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 199 TV---------------------------PSQIMG------------LVVVAHALPPPTI 219
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 220 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 270
>gi|348572221|ref|XP_003471892.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3-like [Cavia porcellus]
Length = 929
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 191 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 250
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 251 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 307
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 308 TV---------------------------PSQIMG------------LVVVAHALPPPTI 328
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 329 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 379
>gi|441595556|ref|XP_004087250.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3 [Nomascus leucogenys]
Length = 819
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 90/231 (38%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V L G SI++ HP DH E+ + +LS ED +
Sbjct: 191 QVRLGGSSIFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 250
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 251 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 307
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 308 TV---------------------------PSQIMG------------LVVVAHALPPPTI 328
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 329 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 379
>gi|18858361|ref|NP_571653.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
[Danio rerio]
gi|7595272|gb|AAF64396.1|AF144691_1 Bmal2 [Danio rerio]
Length = 575
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 74/234 (31%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-------------------A 36
+ +L+GQS+++ HP D +VK LSA+ D + A
Sbjct: 145 RTELIGQSLFDYVHPKDIGKVKEQLSASELYPRERLIDAKTGLQVQAELPVGSARLCSGA 204
Query: 37 QRSVFIRLKCT-LTSK-------GRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+RS F R+K +T K G + ++ Y +HCTG++ P +T
Sbjct: 205 RRSFFCRMKYNKITVKEEKDFQAGASKKKESQRYCTVHCTGYM--RTWPTRQLAT----- 257
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSH--CFVAIGEPIPHP---ANY 143
G A DK E SH C VA+G PH AN
Sbjct: 258 -----------EGEAEADK-----------------ESSHFSCLVAMGRVHPHTLPQANG 289
Query: 144 DVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++ + T F+T++++D KFT+ D+ LG+ P + S +++ H D H+
Sbjct: 290 EIKVKPTEFVTRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHLDDLPHL 343
>gi|42542710|gb|AAH66388.1| Arntl2 protein [Danio rerio]
Length = 500
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 74/234 (31%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-------------------A 36
+ +L+GQS+++ HP D +VK LSA+ D + A
Sbjct: 201 RTELIGQSLFDYVHPKDIGKVKEQLSASELYPRERLIDAKTGLQVQAELPVGSARLCSGA 260
Query: 37 QRSVFIRLKCT-LTSK-------GRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
+RS F R+K +T K G + ++ Y +HCTG++ P +T
Sbjct: 261 RRSFFCRMKYNKITVKEEKDFQAGASKKKESQRYCTVHCTGYM--RTWPTRQLAT----- 313
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSH--CFVAIGEPIPHP---ANY 143
G A DK E SH C VA+G PH AN
Sbjct: 314 -----------EGEAEADK-----------------ESSHFSCLVAMGRVHPHTLPQANG 345
Query: 144 DVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++ + T F+T++++D KFT+ D+ LG+ P + S +++ H D H+
Sbjct: 346 EIKVKPTEFVTRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHLDDLPHL 399
>gi|262477844|gb|ACY68220.1| tango [Delia radicum]
Length = 361
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 73/241 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+Y+ HP D +++ LS +++ + A+R
Sbjct: 110 DWYGTSLYDHIHPDDREKIREQLSTQESQNSGRILDLKSGTVKKEGHQSSMRLSMGARRG 169
Query: 40 VFIRLKCTLTS------------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ + K RN + + V+HCTG+ ++N P T
Sbjct: 170 FICRMRVGNVNPESMVAGHLNRLKQRNSLGPSRDGTNFAVVHCTGY-IKNWPP-----TE 223
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE-PIPHPANY 143
M P +++ D+ GS C VAIG + A+
Sbjct: 224 MFPGVHMDRPVDDDMHGSHC------------------------CLVAIGRLQVTSTASN 259
Query: 144 DVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
D+ S F+T+H++D KFT+ D+ + + LG+ P + K +DF H +D H++ +F
Sbjct: 260 DISNSNNQSEFITRHAVDGKFTFVDQRVMNILGYTPPELLGKICYDFFHPEDQSHMKESF 319
Query: 201 K 201
+
Sbjct: 320 E 320
>gi|119913901|ref|XP_605440.3| PREDICTED: neuronal PAS domain-containing protein 3 [Bos taurus]
Length = 784
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 34 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 93
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 94 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 150
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 151 TV---------------------------PSQIMG------------LVVVAHALPPPTI 171
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 172 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 222
>gi|47203046|emb|CAG14839.1| unnamed protein product [Tetraodon nigroviridis]
Length = 141
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 47/177 (26%)
Query: 24 SILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
S+L+ ++T +RS FIR+K TLT +G V++K++ YKVIH TG L
Sbjct: 7 SLLAPDNT----LERSFFIRMKSTLTKRG--VHIKSSGYKVIHVTGRL------------ 48
Query: 84 LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY 143
I ++R S P + +G VA+ +P P
Sbjct: 49 ------RIRMALTHSR----------SVPNQIMG------------MVAVAHALPPPTLN 80
Query: 144 DVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+V + Q F+T+ ++D+K Y + + D++ P + K + HA+D I+ +
Sbjct: 81 EVRIDCQMFVTRVNMDLKIVYCENRVSDYMDLTPVDVVGKRCYQVVHAEDVEGIRQS 137
>gi|203285568|gb|ACH97372.1| tango [Ceratitis caetrata]
Length = 151
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 28 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 67
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 68 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 117
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 118 SPTDLLGKICYDFCHAEDQMNVKDSF 143
>gi|203285570|gb|ACH97373.1| tango [Ceratitis pinax]
Length = 156
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 28 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 67
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 68 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 117
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 118 SPTDLLGKICYDFCHAEDQMNVKDSF 143
>gi|340715991|ref|XP_003396488.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Bombus terrestris]
Length = 670
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 57/204 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYK 63
DL+GQS +++ HP D ++VK LS++ L+ + R ++ K Y
Sbjct: 275 DLLGQSWFDILHPKDVAKVKEQLSSS-----------------DLSPRERLIDAKNWKYC 317
Query: 64 VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVV 123
VI CTG+L ++ PA K D E E G+
Sbjct: 318 VIQCTGYL-KSWAPA----------------------------KIDLEEHEGDGDGEACN 348
Query: 124 TEPSHCFVAIGE-----PIPHPANYDV-PLSQTFLTKHSLDMKFTYADETMEDFLGFNPD 177
C VA+G P P + P+ F+++H++D KF + D+ LGF P
Sbjct: 349 LS---CLVAVGRLQSTLPTSLPKKPRLRPIK--FVSRHAMDGKFLFVDQRATLVLGFLPQ 403
Query: 178 IFIAKSVFDFHHAQDSFHIQNAFK 201
+ S+++++H D H+ + K
Sbjct: 404 ELLGTSMYEYYHHDDIPHLAESHK 427
>gi|203285576|gb|ACH97376.1| tango [Ceratitis gravinotata]
Length = 149
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 21 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 60
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 61 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 110
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 111 SPTDLLGKICYDFCHAEDQMNVKDSF 136
>gi|344253559|gb|EGW09663.1| Neuronal PAS domain-containing protein 3 [Cricetulus griseus]
Length = 491
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 82/230 (35%)
Query: 3 VDLMGQSIYEVTHPCDHSEV-----------KSILSANH--------------------- 30
V+L G S+++ HP DH E+ + +LS
Sbjct: 41 VELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGAAEDAASSASSSSQSETPEPVE 100
Query: 31 -------TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
T D +RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G T
Sbjct: 101 TTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRT 157
Query: 84 LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY 143
+ P + +G V + +P P
Sbjct: 158 V---------------------------PSQIMG------------LVVVAHALPPPTIN 178
Query: 144 DVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 179 EVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 228
>gi|203285582|gb|ACH97379.1| tango [Ceratitis querita]
Length = 154
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 28 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 67
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 68 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 117
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 118 SPTDLLGKICYDFCHAEDQMNVKDSF 143
>gi|345787824|ref|XP_851850.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 2 [Canis lupus familiaris]
Length = 626
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+DSEP+ E C VAIG +P P N D+
Sbjct: 298 -----------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGDI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|203285578|gb|ACH97377.1| tango [Ceratitis perseus]
Length = 152
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 24 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 63
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 64 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 113
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 114 SPTDLLGKICYDFCHAEDQMNVKDSF 139
>gi|345787826|ref|XP_003432972.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Canis lupus familiaris]
Length = 583
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 254
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+DSEP+ E C VAIG +P P N D+
Sbjct: 255 -----------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGDI 289
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 341
>gi|203285584|gb|ACH97380.1| tango [Ceratitis sp. PE]
Length = 156
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 28 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHSSHC-------------- 67
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 68 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 117
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 118 SPTDLLGKICYDFCHAEDQMNVKDSF 143
>gi|4586558|dbj|BAA76414.1| BMAL1b' [Mus musculus]
Length = 632
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT---------YKVIHCTGHLVQNQTPASNGSTLMEPQD 89
S+F R+KC S A+T + IH TG+L ++ P G
Sbjct: 253 SLFCRMKCNRPSVKVEDKDFASTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 304
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P PAN ++
Sbjct: 305 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGEI 339
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 391
>gi|5360228|dbj|BAA81898.1| BMAL1b [Mus musculus]
Length = 625
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT---------YKVIHCTGHLVQNQTPASNGSTLMEPQD 89
S+F R+KC S A+T + IH TG+L ++ P G
Sbjct: 246 SLFCRMKCNRPSVKVEDKDFASTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P PAN ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|148235012|ref|NP_001089031.1| uncharacterized protein LOC503673 [Xenopus laevis]
gi|50418074|gb|AAH77551.1| LOC503673 protein [Xenopus laevis]
Length = 627
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 73/229 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 191 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPTRLCSGARR 250
Query: 39 SVFIRLKCTLTSKG-------RNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S N + K A K IH TG+L ++ P G
Sbjct: 251 SFFCRMKCNRPSLKVENKDFPSNCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 303
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 304 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPGNGE 337
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ + T ++++H++D KF + D+ LG+ P + S +++ H D
Sbjct: 338 IRVKSTEYVSRHAVDGKFVFVDQRATAILGYLPQELLGTSCYEYFHHDD 386
>gi|121223004|gb|ABM47691.1| EPAS1 [Saguinus labiatus]
Length = 56
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL-VQNQTP 77
++D+ +R F+R+KCT+T++GR VN+K+AT+KV+HCTG + V N P
Sbjct: 5 SKDMSTERDFFMRMKCTVTNRGRTVNLKSATWKVLHCTGQVKVYNNCP 52
>gi|260830027|ref|XP_002609963.1| hypothetical protein BRAFLDRAFT_124387 [Branchiostoma floridae]
gi|229295325|gb|EEN65973.1| hypothetical protein BRAFLDRAFT_124387 [Branchiostoma floridae]
Length = 506
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 47/177 (26%)
Query: 38 RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPAS-------NGSTLMEPQDN 90
R IR + L G++ Y V+HCTG+ +++ P N ++E QD
Sbjct: 278 RLAHIRQRNGLGPPGKD----GEQYAVVHCTGY-IKSWPPTGKLAAKLVNAGVVLEQQDA 332
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------PIPHPANYD 144
+ N+ +C VAIG P N
Sbjct: 333 DADGHSNSH----------------------------YCLVAIGRLQVTSSPSCSDLNTT 364
Query: 145 VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P ++ F+++HS+D KFT+ D+ + LG+ P + K+ FDF+H +D +++ +F+
Sbjct: 365 SPPTE-FISRHSMDGKFTFVDQRVIPVLGYQPTDLLGKTCFDFYHPEDQPNLKESFE 420
>gi|410907313|ref|XP_003967136.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Takifugu rubripes]
Length = 638
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 205 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 264
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 265 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 317
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P+ D
Sbjct: 318 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPSLAD 351
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ LG+ P + S +++ H D H+
Sbjct: 352 IRVKPTEYVSRHAIDGKFVFVDQRATAILGYLPQELLGTSFYEYFHQDDIGHL 404
>gi|449504649|ref|XP_002187659.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Taeniopygia guttata]
Length = 626
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPANGE 332
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIAHL 385
>gi|149068252|gb|EDM17804.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_d
[Rattus norvegicus]
gi|149068253|gb|EDM17805.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_d
[Rattus norvegicus]
Length = 595
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 73/236 (30%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR--------- 35
++ DL+GQS+++ HP D ++VK LS++ T DI
Sbjct: 152 LRNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSG 211
Query: 36 AQRSVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLM 85
A+RS F R+KC S ++ IH TG+L ++ P G
Sbjct: 212 ARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL--- 267
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPA 141
+DSEP+ E C VAIG +P P
Sbjct: 268 ---------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHMVPQPV 298
Query: 142 NYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
N ++ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 299 NGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 354
>gi|444727378|gb|ELW67876.1| Single-minded like protein 2 [Tupaia chinensis]
Length = 908
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 20 SEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPAS 79
SE S+ + +RS F+R+KC L RN + + YKVIHC+G+L Q
Sbjct: 416 SETASVHLGLSQVEYEIERSFFLRMKCVLAK--RNAGLTCSGYKVIHCSGYLKIRQY--- 470
Query: 80 NGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH 139
D + S Q VG VA+G+ +P
Sbjct: 471 --------------MLDMSLYDSCYQI---------VG------------LVAVGQSLPP 495
Query: 140 PANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQN 198
A ++ L S F+ + SLD+K + D + + G+ P I K+++ H D FH++
Sbjct: 496 SAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVHGCDVFHLRF 555
Query: 199 A 199
A
Sbjct: 556 A 556
>gi|134024857|gb|AAI34896.1| Arntl1b protein [Danio rerio]
Length = 645
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 211 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVRTDIAPSPSRLCSGARR 270
Query: 39 SVFIRLKCTLT----------SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC + S ++ IH TG+L ++ P G
Sbjct: 271 SFFCRMKCNRSMVKMEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 323
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P N D
Sbjct: 324 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPVNGD 357
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 358 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHL 410
>gi|3211720|gb|AAC21449.1| TIC [Rattus norvegicus]
Length = 590
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 73/236 (30%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR--------- 35
++ DL+GQS+++ HP D ++VK LS++ T DI
Sbjct: 147 LRNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSG 206
Query: 36 AQRSVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLM 85
A+RS F R+KC S ++ IH TG+L ++ P G
Sbjct: 207 ARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL--- 262
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPA 141
+DSEP+ E C VAIG +P P
Sbjct: 263 ---------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHMVPQPV 293
Query: 142 NYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
N ++ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 294 NGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 349
>gi|328704457|ref|XP_003242496.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
isoform 3 [Acyrthosiphon pisum]
Length = 659
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 35/146 (23%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
+ VIHCTG+ ++N P+ Q D+ G I+ R
Sbjct: 264 FAVIHCTGY-IKNWPPSG--------------QFDHPLSGVQIE--------------RA 294
Query: 122 VVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFN 175
V + +HC VAIG + P D+ S + F+++HS+D KFT+ D+ + LG+
Sbjct: 295 VEEDGTHCCLVAIGRLQVTSTPNTTDLAGSNSNAEFISRHSMDGKFTFVDQRVTHILGYK 354
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFK 201
P ++K+ ++F H +D H++ +F+
Sbjct: 355 PQDLLSKTCYEFFHPEDQTHMKESFE 380
>gi|30231256|ref|NP_840085.1| aryl hydrocarbon receptor nuclear translocator-like 1b [Danio
rerio]
gi|21685554|dbj|BAC02688.1| bHLH-PAS transcription factor [Danio rerio]
Length = 622
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 188 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVRTDIAPSPSRLCSGARR 247
Query: 39 SVFIRLKCTLT----------SKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC + S ++ IH TG+L ++ P G
Sbjct: 248 SFFCRMKCNRSMVKMEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 300
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P N D
Sbjct: 301 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPVNGD 334
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 335 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHL 387
>gi|340007432|ref|NP_001229977.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform 2 [Mus musculus]
gi|15029728|gb|AAH11080.1| Arntl protein [Mus musculus]
gi|148685094|gb|EDL17041.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Mus musculus]
Length = 613
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 286 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGE 319
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|18858359|ref|NP_571652.1| aryl hydrocarbon receptor nuclear translocator-like 1a [Danio
rerio]
gi|7595268|gb|AAF64394.1|AF144689_1 Bmal1 [Danio rerio]
gi|7595270|gb|AAF64395.1|AF144690_1 Bmal1 [Danio rerio]
Length = 626
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 190 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 249
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 250 SFFCRMKCNRPSVKMEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 302
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P N D
Sbjct: 303 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPMNGD 336
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 337 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHL 389
>gi|432941069|ref|XP_004082814.1| PREDICTED: neuronal PAS domain-containing protein 3-like [Oryzias
latipes]
Length = 946
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 84/240 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVK-------------SILSANHTEDIRA------------ 36
+V+L G S+++ HP DH E+ S+ A ED +
Sbjct: 160 QVELTGSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQAAINEDGASSASSSSHSETPE 219
Query: 37 ----------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASN 80
+RS FIR+K TLT +G V++K++ YKVIH TG L
Sbjct: 220 PVESSSPSLLAPDNSLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL--------- 268
Query: 81 GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHP 140
I ++R S P + +G V + +P P
Sbjct: 269 ---------RIRMALTHSR----------SVPNQIMG------------MVVVAHALPPP 297
Query: 141 ANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+V + Q F+T+ ++D+K Y + + D++ P + K + F HA+D I+ +
Sbjct: 298 TINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVEIVGKRCYQFIHAEDVEGIRQS 357
>gi|328704453|ref|XP_001945040.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
isoform 1 [Acyrthosiphon pisum]
Length = 660
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 35/146 (23%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
+ VIHCTG+ ++N P+ Q D+ G I+ R
Sbjct: 265 FAVIHCTGY-IKNWPPSG--------------QFDHPLSGVQIE--------------RA 295
Query: 122 VVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFN 175
V + +HC VAIG + P D+ S + F+++HS+D KFT+ D+ + LG+
Sbjct: 296 VEEDGTHCCLVAIGRLQVTSTPNTTDLAGSNSNAEFISRHSMDGKFTFVDQRVTHILGYK 355
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFK 201
P ++K+ ++F H +D H++ +F+
Sbjct: 356 PQDLLSKTCYEFFHPEDQTHMKESFE 381
>gi|239937484|ref|NP_001123206.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Ovis
aries]
gi|152940833|gb|ABS44881.1| aryl hydrocarbon receptor nuclear translocator-like protein [Ovis
aries]
Length = 626
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
V + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 VRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|224052061|ref|XP_002187715.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Taeniopygia guttata]
Length = 633
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPANGE 339
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIAHL 392
>gi|49532661|dbj|BAD26600.1| BMAL1b [Mus musculus]
Length = 626
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|203285612|gb|ACH97394.1| tango [Ceratitis ditissima]
Length = 152
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 24 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 63
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 64 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVINVLGY 113
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 114 SPTDLLGKICYDFCHAEDQMNVKDSF 139
>gi|270014664|gb|EFA11112.1| hypothetical protein TcasGA2_TC004710 [Tribolium castaneum]
Length = 679
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 37/146 (25%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N P T M +E Q+ E+E+
Sbjct: 306 YAVVHCTGY-IKNWPP-----TDMFTGVQMERQT-----------------EDEI----- 337
Query: 122 VVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFN 175
SHC VAIG + P D+ S + F+++HS+D KF++ D+ + LG++
Sbjct: 338 ---HTSHCCLVAIGRLQVTSTPNTSDLSGSNSAAEFISRHSMDGKFSFVDQRVIGLLGYS 394
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + KS F+F H +D H++++F+
Sbjct: 395 PPELLGKSCFEFFHPEDQTHMKDSFE 420
>gi|6680732|ref|NP_031515.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform 1 [Mus musculus]
gi|3402483|dbj|BAA32208.1| Arnt3 [Mus musculus]
gi|19683934|gb|AAH25973.1| Aryl hydrocarbon receptor nuclear translocator-like [Mus musculus]
gi|74144664|dbj|BAE27317.1| unnamed protein product [Mus musculus]
gi|74151184|dbj|BAE27714.1| unnamed protein product [Mus musculus]
gi|148685095|gb|EDL17042.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Mus musculus]
Length = 626
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|49532660|dbj|BAD26599.1| BMAL1b' [Mus musculus]
Length = 633
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGE 339
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|146345378|sp|Q9EPW1.4|BMAL1_RAT RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1;
AltName: Full=Tic
Length = 626
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|300794072|ref|NP_001178099.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Bos
taurus]
gi|296480174|tpg|DAA22289.1| TPA: aryl hydrocarbon receptor nuclear translocator-like [Bos
taurus]
Length = 626
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 78/248 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P PAN +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNP 203
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAE----- 387
Query: 204 CYSCVIKS 211
C+ V++S
Sbjct: 388 CHRQVLQS 395
>gi|28279879|gb|AAH44135.1| Arntl1a protein [Danio rerio]
Length = 626
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 190 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 249
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 250 SFFCRMKCNRPSVKMEDKDFPSTCSKKRADRKSFCTIHSTGYL-KSWPPTKMGL------ 302
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P N D
Sbjct: 303 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPINGD 336
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 337 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHL 389
>gi|47209832|emb|CAF94040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P+ D
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPSLAD 332
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ LG+ P + S +++ H D H+
Sbjct: 333 IRVKPTEYVSRHAIDGKFVFVDQRATAILGYLPQELLGTSFYEYFHQDDIGHL 385
>gi|149068251|gb|EDM17803.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Rattus norvegicus]
Length = 613
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 286 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGE 319
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|71896600|ref|NP_077338.2| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Rattus norvegicus]
gi|71681125|gb|AAH99833.1| Aryl hydrocarbon receptor nuclear translocator-like [Rattus
norvegicus]
gi|149068249|gb|EDM17801.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Rattus norvegicus]
gi|149068250|gb|EDM17802.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Rattus norvegicus]
Length = 626
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|3668183|dbj|BAA33450.1| BMAL1b [Rattus norvegicus]
Length = 626
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|149068248|gb|EDM17800.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Rattus norvegicus]
Length = 633
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGE 339
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|327263651|ref|XP_003216631.1| PREDICTED: neuronal PAS domain-containing protein 3-like [Anolis
carolinensis]
Length = 903
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 82/231 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRAQ------------- 37
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 178 QVELTGSSVFDYVHPGDHVELAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 237
Query: 38 ---------------RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
RS F+R+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 238 ESTSPSLLAADNDLDRSFFMRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 294
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 295 TV---------------------------PSQIMG------------LVVVAHALPPPTI 315
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 316 NEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 366
>gi|242021051|ref|XP_002430960.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516180|gb|EEB18222.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 671
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 129 CFVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG + P D+ S F+++HS+D KF++ D+ + LG+ P + KS
Sbjct: 313 CLVAIGRLQVTSTPNTSDLSGSNNNAEFISRHSIDGKFSFVDQRVMGLLGYTPPELLGKS 372
Query: 184 VFDFHHAQDSFHIQNAFK 201
FDF H +D H++ +F+
Sbjct: 373 CFDFFHVEDQTHMKESFE 390
>gi|189233619|ref|XP_970422.2| PREDICTED: similar to arylhydrocarbon receptor nuclear translocator
homolog b [Tribolium castaneum]
Length = 661
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 37/146 (25%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N P T M +E Q+ E+E+
Sbjct: 288 YAVVHCTGY-IKNWPP-----TDMFTGVQMERQT-----------------EDEI----- 319
Query: 122 VVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFN 175
SHC VAIG + P D+ S + F+++HS+D KF++ D+ + LG++
Sbjct: 320 ---HTSHCCLVAIGRLQVTSTPNTSDLSGSNSAAEFISRHSMDGKFSFVDQRVIGLLGYS 376
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + KS F+F H +D H++++F+
Sbjct: 377 PPELLGKSCFEFFHPEDQTHMKDSFE 402
>gi|34098759|sp|Q9WTL8.2|BMAL1_MOUSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Arnt3; AltName: Full=Brain and
muscle ARNT-like 1
gi|148685096|gb|EDL17043.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Mus musculus]
Length = 632
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT---------YKVIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S A+T + IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFASTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 304
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P PAN ++
Sbjct: 305 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGEI 339
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 391
>gi|203285574|gb|ACH97375.1| tango [Ceratitis podocarpi]
Length = 145
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 17 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 56
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F T+H++D KFT+ D+ + + LG+
Sbjct: 57 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFXTRHAMDGKFTFVDQRVMNVLGY 106
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 107 SPTDLLGKICYDFCHAEDQMNVKDSF 132
>gi|427794165|gb|JAA62534.1| Putative tango, partial [Rhipicephalus pulchellus]
Length = 700
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 43/149 (28%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
A Y V+HCTG+ ++N P S +Q EP ++ G
Sbjct: 358 GAAYAVVHCTGY-IKNWPP------------------------SGVQ----VEPGDQDGG 388
Query: 119 KRRVVTEPSHC-FVAIGE----PIPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFL 172
SHC VAIG P+P++ S F+++HS+D KFT+ D + L
Sbjct: 389 --------SHCCLVAIGRLQVTSAPNPSDLVGSNSNAEFISRHSVDGKFTFVDPRVTAVL 440
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
G+ P + K FDF H +D H++ F+
Sbjct: 441 GYQPQELLGKPCFDFFHPEDQGHMKENFE 469
>gi|426226939|ref|XP_004007590.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 [Ovis aries]
Length = 638
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT---EDIR----------------------A 36
+ L+GQS+++ HP D S+VK LS++ E +R +
Sbjct: 222 QASLIGQSLFDFLHPKDVSKVKEQLSSSDISPREKLRDAKAALQVHSNFHTSKSHVYSGS 281
Query: 37 QRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + + + K IHCTG+L ++ N + + E +D
Sbjct: 282 RRSFFCRIKSCKISVKEEHEYLPNSKKKDHRKFCTIHCTGYL---RSWPPNIAGMEEERD 338
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N +++SD T C VAIG PH P N ++
Sbjct: 339 NKKDRSDFT------------------------------CLVAIGRLRPHIVPQNSSEIK 368
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 369 VKPAEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 415
>gi|410973227|ref|XP_003993056.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Felis catus]
Length = 613
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 286 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 319
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|297206838|ref|NP_596882.1| aryl hydrocarbon receptor nuclear translocator-like 2 [Rattus
norvegicus]
Length = 570
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 60/227 (26%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR---------------AQRSVFIRLK- 45
+ LMGQ++++ HP D +VK LS + ++ ++RS F R+K
Sbjct: 160 QASLMGQNLFDFLHPKDVPKVKEQLSCDGLLRVKVHSHSHIGRSRVHSGSRRSFFFRMKS 219
Query: 46 -CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNT 98
CT+ K + K IHCTG+L ++ P G+
Sbjct: 220 SCTVPVKEEQRCSSCSKKKDQRKFHTIHCTGYL-RSWPPNVVGT---------------- 262
Query: 99 RRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH---PANYDVPLSQT-FLTK 154
E+E+G + + P C VA+G P+ P N + + F+T+
Sbjct: 263 --------------EKEMGSGKD--SGPLTCLVAMGRLQPYTVPPKNGKINVRPAEFITR 306
Query: 155 HSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+++ KF Y D+ LG+ PD + S +++ H D ++ + K
Sbjct: 307 FAMNGKFVYVDQRATAILGYLPDELLGTSCYEYFHQDDHSNLSDKHK 353
>gi|149051228|gb|EDM03401.1| neuronal PAS domain protein 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 270
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 43/170 (25%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
T D +RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G T+
Sbjct: 49 TTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRTV------ 99
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS-Q 149
P + +G V + +P P +V +
Sbjct: 100 ---------------------PSQIMG------------LVVVAHALPPPTINEVRIDCH 126
Query: 150 TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
F+T+ ++D+ Y + + D++ P + K + F HA+D I+++
Sbjct: 127 MFVTRVNMDLNIIYCENRITDYMDLTPVDIVGKRCYHFIHAEDVEGIRHS 176
>gi|195038079|ref|XP_001990488.1| GH18221 [Drosophila grimshawi]
gi|193894684|gb|EDV93550.1| GH18221 [Drosophila grimshawi]
Length = 645
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 77/241 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D G S+YE HP D +++ LS +++ + A+R
Sbjct: 127 DWYGTSLYEHIHPDDRDKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRG 186
Query: 40 VFIRLKCTLTS------------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R++ + K RN + + Y V+HCTG+ ++N P T
Sbjct: 187 FICRMRVGNVNPDAMVSGHLNRLKQRNSLGPSRDGSNYAVVHCTGY-IKNWPP-----TD 240
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHC-FVAIGE-PIPHPAN 142
M P +++ +D DD SHC VAIG + A
Sbjct: 241 MFPNVHMD------------RDVDDMA---------------SHCCLVAIGRLQVTSTAA 273
Query: 143 YDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
D+ S F+T+H+ D KFT+ D+ + LG+ P + K +DF H +D H++ +
Sbjct: 274 NDMSGSNNQSEFITRHAFDGKFTFVDQRVLHILGYTPTELLGKICYDFFHPEDQSHMKES 333
Query: 200 F 200
F
Sbjct: 334 F 334
>gi|282160442|gb|ADA79534.1| hypoxia-inducible factor-1 alpha [Triops longicaudatus]
Length = 136
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 15/63 (23%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA-------NHTEDIRA--------QRSVFIRLKC 46
++DL+GQSIYE +HPCDH E+K +LS NH RS F+RLKC
Sbjct: 74 QIDLIGQSIYEFSHPCDHDEIKEVLSLRVTSVNNNHPNAAAVSLPLTTPESRSFFLRLKC 133
Query: 47 TLT 49
TLT
Sbjct: 134 TLT 136
>gi|410973229|ref|XP_003993057.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Felis catus]
Length = 633
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 339
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|345481068|ref|XP_001605013.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Nasonia vitripennis]
Length = 690
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 64/245 (26%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSA--------------------NHTEDIR----AQRS 39
D G S+Y HP D +V+ LS H +R ++R
Sbjct: 166 DWYGTSLYNQVHPDDADKVREQLSTAEPQHAGRVLDLKTGTVKKEGHQSSVRLCTGSRRG 225
Query: 40 VFIRLKC-TLTSKG-------------RNVNVKAA----TYKVIHCTGHLVQNQTPASNG 81
R+K +L + G RN A +Y V+HCTG+ ++N P +
Sbjct: 226 FICRMKVGSLQTSGDMAAAHGLQRMKQRNSLGPPARDGQSYAVVHCTGY-IKNWPPTGDF 284
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
P G + D+ + VG+ + +C VAIG +
Sbjct: 285 VPPCIPT------------GVGMADRGGVPSNDGVGDDVSI----HYCLVAIGRLQVTST 328
Query: 140 PANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D+ S + F+++HS++ KFT+ D+ + LG+ P + ++F H +D H+
Sbjct: 329 PNTNDLAGSSSNNEFISRHSVEGKFTFVDQRVGAILGYTPSELLGHPCYEFFHPEDHTHM 388
Query: 197 QNAFK 201
+ +F+
Sbjct: 389 RESFE 393
>gi|281350883|gb|EFB26467.1| hypothetical protein PANDA_015776 [Ailuropoda melanoleuca]
Length = 627
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+DSEP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|194215671|ref|XP_001500949.2| PREDICTED: neuronal PAS domain-containing protein 1 [Equus
caballus]
Length = 479
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 84/237 (35%), Gaps = 93/237 (39%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--------------------------TEDIR 35
+V+L G S+++ HP DHSEV L T +I
Sbjct: 57 QVELTGSSVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSSLADTPEIE 116
Query: 36 A------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
A +RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 117 ASPAEGSPSSGVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL------------ 162
Query: 84 LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY 143
R A+ VA+G +P
Sbjct: 163 ----------------RARAL------------------------GLVALGHTLPPAPLA 182
Query: 144 DVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++PL T + + SL + + + D + P + +S + F H QD+ I+ +
Sbjct: 183 ELPLHGHTIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDAARIRQS 239
>gi|195444134|ref|XP_002069729.1| GK11420 [Drosophila willistoni]
gi|194165814|gb|EDW80715.1| GK11420 [Drosophila willistoni]
Length = 651
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 38/147 (25%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
+ Y V+HCTG+ ++N P T M P ++E +D DD
Sbjct: 221 GSNYAVVHCTGY-IKNWPP-----TDMFPNMHME------------RDVDDMT------- 255
Query: 119 KRRVVTEPSHC-FVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLG 173
SHC VAIG + A D+ S F+T+H++D KFT+ D+ + + LG
Sbjct: 256 --------SHCCLVAIGRLQVTSTAANDMSGSNNQSEFITRHAVDGKFTFVDQRVLNILG 307
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAF 200
++P + K +DF H +D H++ +F
Sbjct: 308 YSPTELLGKICYDFFHPEDQSHMKESF 334
>gi|255693993|gb|ACU30155.1| hypoxia inducible factor 1 beta [Litopenaeus vannamei]
Length = 608
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 129 CFVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG + P D+ S + F+++H++D KFT+ D+ + LG++P +AK
Sbjct: 252 CLVAIGRLQVTSAPNTSDLMGSNSQNEFISRHAMDGKFTFVDQRVMTVLGYSPQELLAKP 311
Query: 184 VFDFHHAQDSFHIQNAF 200
FDF H +D H++ +F
Sbjct: 312 CFDFFHPEDQTHMKESF 328
>gi|328704455|ref|XP_003242495.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
isoform 2 [Acyrthosiphon pisum]
Length = 652
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 112 PEEEVGEKRRVVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYAD 165
P V +R V + +HC VAIG + P D+ S + F+++HS+D KFT+ D
Sbjct: 278 PPSGVQIERAVEEDGTHCCLVAIGRLQVTSTPNTTDLAGSNSNAEFISRHSMDGKFTFVD 337
Query: 166 ETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ + LG+ P ++K+ ++F H +D H++ +F+
Sbjct: 338 QRVTHILGYKPQDLLSKTCYEFFHPEDQTHMKESFE 373
>gi|354503574|ref|XP_003513856.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Cricetulus griseus]
Length = 539
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|410973225|ref|XP_003993055.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Felis catus]
Length = 625
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+DSEP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|203285580|gb|ACH97378.1| tango [Ceratitis curvata]
Length = 147
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+
Sbjct: 28 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHAXHC-------------- 67
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 68 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 117
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 118 SPTDLLGKICYDFCHAEDQMNVKDSF 143
>gi|395543498|ref|XP_003773654.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Sarcophilus harrisii]
Length = 613
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEEKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 286 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 319
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|395543492|ref|XP_003773651.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Sarcophilus harrisii]
Length = 626
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEEKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|154147739|ref|NP_001093686.1| aryl-hydrocarbon receptor nuclear translocator 2 [Xenopus
(Silurana) tropicalis]
gi|134025837|gb|AAI36117.1| arnt2 protein [Xenopus (Silurana) tropicalis]
Length = 715
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE THP D +++ L + D++ ++RS
Sbjct: 176 EWFGSTLYEQTHPDDIEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
RL+C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 236 FICRLRCGNAPLDHLPLNRISTMRKRYRNGLGPVKEGEAQYSVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D EVG+ + +C VAIG +
Sbjct: 292 -------------------GMTIPEED-----AEVGQGSK------YCLVAIGRLQVTSS 321
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + D + L FL++HS + T+ D +G+ P + K + +F H +D H+
Sbjct: 322 PGSLDMNGMSLPTEFLSRHSTEGVITFVDPRCISIIGYQPQDLLGKDIIEFCHPEDQSHL 381
Query: 197 QNAFK 201
+ +F+
Sbjct: 382 RESFQ 386
>gi|301781486|ref|XP_002926157.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Ailuropoda melanoleuca]
Length = 625
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+DSEP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|410973231|ref|XP_003993058.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Felis catus]
Length = 582
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 254
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+DSEP+ E C VAIG +P P N ++
Sbjct: 255 -----------------DEDSEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 289
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 341
>gi|307194991|gb|EFN77076.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Harpegnathos saltator]
Length = 625
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 23/146 (15%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N P + P + + RG +Q DS +E
Sbjct: 210 YAVVHCTGY-IKNWPPTGDFVPPCVPGVGLGD------RG-GVQAGPDSVTDENAS---- 257
Query: 122 VVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFN 175
+HC VAIG + P N D+ S + F+++HS + KFT+ D+ + LG+
Sbjct: 258 -----THCCLVAIGRLQVTSTPNNSDLTGSNSNSEFISRHSAEGKFTFVDQRVGGILGYT 312
Query: 176 PDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + +DF H +D H++ +F+
Sbjct: 313 PSELLGHPCYDFFHPEDLAHMRESFE 338
>gi|395543494|ref|XP_003773652.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Sarcophilus harrisii]
Length = 633
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEEKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 339
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|300798547|ref|NP_001179586.1| neuronal PAS domain-containing protein 1 [Bos taurus]
gi|296477577|tpg|DAA19692.1| TPA: neuronal PAS domain protein 1-like [Bos taurus]
Length = 587
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 85/237 (35%), Gaps = 93/237 (39%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------- 27
+V+L G S+++ HP DHSEV L
Sbjct: 167 QVELTGSSVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSSLADTPEIE 226
Query: 28 ANHTEDIRA----QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
A+ TE R+ +RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 227 ASPTEVSRSSRVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL------------ 272
Query: 84 LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY 143
R A+ VA+G +P
Sbjct: 273 ----------------RARAL------------------------GLVALGHTLPPAPLA 292
Query: 144 DVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++PL + + SL + + + D + P + +S + F H QD+ I+ +
Sbjct: 293 ELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQS 349
>gi|326919978|ref|XP_003206253.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Meleagris gallopavo]
Length = 633
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKLEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPVNGE 339
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|157819069|ref|NP_001100949.1| neuronal PAS domain-containing protein 1 [Rattus norvegicus]
gi|149056888|gb|EDM08319.1| neuronal PAS domain protein 1 (predicted) [Rattus norvegicus]
Length = 595
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 82/236 (34%), Gaps = 92/236 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------------------------TEDIRA 36
+V+L G S+++ HP DHSEV L T +I A
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRAATTGPPTPPSVSSTSSSSSSSSLVDTPEIEA 233
Query: 37 ------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTL 84
+RS F+R+K TLT +G +NVKA+ YKVIH TG L
Sbjct: 234 SPTEASPAFRVQERSFFVRMKSTLTKRG--LNVKASGYKVIHVTGRL------------- 278
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYD 144
R A+ VA+G +P +
Sbjct: 279 ---------------RARAL------------------------GLVALGHTLPPAPLAE 299
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+PL + + SL + + + D + P + +S + F H QD I+ +
Sbjct: 300 LPLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDVTRIRQS 355
>gi|119588913|gb|EAW68507.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_e
[Homo sapiens]
Length = 483
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 255
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 256 ------------------DEDNEPDNEGCN--------LSCLVAIGRLHSHVVPQPVNGE 289
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 342
>gi|119588914|gb|EAW68508.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_f
[Homo sapiens]
Length = 596
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 73/236 (30%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR--------- 35
++ DL+GQS+++ HP D ++VK LS++ T DI
Sbjct: 152 LRNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSG 211
Query: 36 AQRSVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLM 85
A+RS F R+KC S ++ IH TG+L ++ P G
Sbjct: 212 ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL--- 267
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPA 141
+D+EP+ E C VAIG +P P
Sbjct: 268 ---------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPV 298
Query: 142 NYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
N ++ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 299 NGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 354
>gi|260279074|dbj|BAI44114.1| cycle protein [Bactrocera cucurbitae]
Length = 401
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 93/244 (38%), Gaps = 89/244 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
++DL+GQS +++ HP D ++VK LS+ + D + A
Sbjct: 133 QMDLLGQSWFDILHPKDVAKVKEQLSSLDPSPRDRLIDAKTMLPVKTDIPQSLCRLCPGA 192
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT-------------------YKVIHCTGHLVQNQTP 77
+RS F R+K L S + ++ T Y+VI CTG+L ++ TP
Sbjct: 193 RRSFFCRMK--LKSNNNQIKEESDTSSSSRSSTKRKSKLSGDHKYRVIQCTGYL-KSWTP 249
Query: 78 ASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPI 137
N E +DN+ N S VAIG
Sbjct: 250 IKNEEQDSESEDNLTNHS---------------------------------SLVAIGRIP 276
Query: 138 PHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
P+ +VP S F+++HS+D KF + D+ +GF P + S +D+
Sbjct: 277 PNVLESNVPPSLDNHPNIRHVLFISRHSVDGKFLFIDQRATLVIGFLPQEMLGTSFYDYF 336
Query: 189 HAQD 192
H D
Sbjct: 337 HHDD 340
>gi|34098389|sp|O88529.1|BMAL1_MESAU RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|3228689|gb|AAC23606.1| bHLH-PAS transcription factor [Mesocricetus auratus]
Length = 626
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|395543496|ref|XP_003773653.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Sarcophilus harrisii]
Length = 583
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEEKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 255
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 256 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 289
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 IRVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 342
>gi|327278953|ref|XP_003224223.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Anolis carolinensis]
Length = 633
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 78/248 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPVNGE 339
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNP 203
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAE----- 394
Query: 204 CYSCVIKS 211
C+ V++S
Sbjct: 395 CHRQVLQS 402
>gi|124487978|gb|ABN12072.1| putative aryl hydrocarbon receptor nuclear translocatorl-like
protein [Maconellicoccus hirsutus]
Length = 362
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 151 FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
F+++HS+D KFT+ D+ + LG++P + KS FDF H +D H++ +F+
Sbjct: 40 FISRHSMDGKFTFVDQRVLQLLGYSPSELLGKSCFDFFHPEDQRHMKESFE 90
>gi|449280889|gb|EMC88114.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Columba livia]
Length = 626
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPVNGE 332
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|126332169|ref|XP_001367705.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Monodelphis domestica]
Length = 626
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEEKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPLNGE 332
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|426367514|ref|XP_004050776.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Gorilla gorilla gorilla]
Length = 624
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 184 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 243
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 244 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 296
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 297 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 330
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 331 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 383
>gi|119588909|gb|EAW68503.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Homo sapiens]
Length = 625
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 184 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 243
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 244 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 296
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 297 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 330
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 331 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 383
>gi|1695803|gb|AAC51213.1| MOP3 [Homo sapiens]
Length = 624
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 184 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 243
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 244 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 296
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 297 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 330
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 331 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 383
>gi|47825375|ref|NP_001001463.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Gallus gallus]
gi|82247579|sp|Q9I8T7.1|BMAL1_CHICK RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=BMAL1b'; AltName: Full=Brain
and muscle ARNT-like 1; Short=cBMAL1
gi|9651532|gb|AAF91179.1|AF205219_1 clock protein [Gallus gallus]
gi|19773558|gb|AAL98706.1|AF246957_1 BMAL1b' [Gallus gallus]
Length = 633
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPVNGE 339
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|341616318|gb|AEK86196.1| BMAL1, partial [Halichoeres trimaculatus]
Length = 376
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 132 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 191
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 192 SFFCRMKCNRPSVKVEDKDFPSTCSKKKAXRKSFCTIHSTGYL-KSWPPTKMGLD----- 245
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P+ D
Sbjct: 246 -------------------EDNEPDNEGCN--------LSCLVAIGRLHPHIVPQPSLAD 278
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 279 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHL 331
>gi|82206301|sp|Q6YGZ5.1|BMAL1_TYTAL RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|37722551|gb|AAO06118.1| BMAL1 [Tyto alba]
Length = 633
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPVNGE 339
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|410044848|ref|XP_003951888.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 613
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 286 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 319
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|332018235|gb|EGI58840.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Acromyrmex echinatior]
Length = 612
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 100/248 (40%), Gaps = 67/248 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-----------------AQRSV 40
D G S+Y+ HP D +V+ LSA + D++ ++R
Sbjct: 99 DWFGTSLYQQVHPDDTEKVREQLSAAEPQHGGRVLDLKTGTVKKEGQSSMRLCMGSRRGF 158
Query: 41 FIRLKC-TLTSKG-------------RNVNVKAA----TYKVIHCTGHLVQNQTPASNGS 82
R+K L + G RN A Y V+HCTG+ ++N P +
Sbjct: 159 ICRMKVGNLQTSGDMAAAHGLHRMKQRNSLGPPARDGQNYAVVHCTGY-IKNWPPTGD-- 215
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSH----CFVAIG--EP 136
+ P + N R IQ D VVT+ + C VAIG +
Sbjct: 216 -FVPP--CVPNVGLGDRGPGGIQTGPDG-----------VVTDENASTHCCLVAIGRLQV 261
Query: 137 IPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
P + D+ S + F+++HS + KFT+ D+ + LG+ P + ++F H +D
Sbjct: 262 TSTPNSSDLAGSNSNSEFISRHSAEGKFTFVDQRVGGILGYTPSELLGHPCYEFFHPEDL 321
Query: 194 FHIQNAFK 201
H++ +F+
Sbjct: 322 THMRESFE 329
>gi|147898769|ref|NP_001090894.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Sus
scrofa]
gi|124495049|gb|ABN13601.1| BMAL1 [Sus scrofa]
Length = 626
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|441646084|ref|XP_003255011.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Nomascus leucogenys]
Length = 613
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 286 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 319
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|326920748|ref|XP_003206630.1| PREDICTED: neuronal PAS domain-containing protein 3-like, partial
[Meleagris gallopavo]
Length = 667
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 43/163 (26%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
T D +RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G T+
Sbjct: 9 TTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRTV------ 59
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS-Q 149
P + +G V + +P P +V +
Sbjct: 60 ---------------------PSQIMG------------LVVVAHALPPPTINEVRIDCH 86
Query: 150 TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 87 MFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 129
>gi|119588915|gb|EAW68509.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_g
[Homo sapiens]
Length = 614
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 286 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 319
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|338725837|ref|XP_001916400.2| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like 2 [Equus caballus]
Length = 680
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 69/236 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------------HTEDIR----A 36
+ L GQS+++ HP D ++VK LS++ HT R +
Sbjct: 263 QASLTGQSLFDFLHPKDVAKVKEQLSSSDISPREKLIDAKTGLQVHGNFHTGRTRVYSGS 322
Query: 37 QRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + + + K IHCTG+L ++ N + E +D
Sbjct: 323 RRSFFCRMKSCKVSVKEEHEGLPNSKKKDHRKFCTIHCTGYL---RSWPPNMVGMEEERD 379
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE--PIPHPANY-DVP 146
N ++ S+ T C VAIG P P N ++
Sbjct: 380 NKKDSSNFT------------------------------CLVAIGRLHPCIVPQNSGEIK 409
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D H+ + K
Sbjct: 410 VKPTEFITRFTMNGKFVYVDQRTTAILGYLPQELLGTSCYEYFHQDDHSHLTDKHK 465
>gi|327278955|ref|XP_003224224.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Anolis carolinensis]
Length = 625
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 77/247 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHPHVVPQPVNGEI 332
Query: 146 PLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+ T ++++H++D KF + D+ L + P + S +++ H D H+ C
Sbjct: 333 RVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAE-----C 387
Query: 205 YSCVIKS 211
+ V++S
Sbjct: 388 HRQVLQS 394
>gi|2094735|dbj|BAA19935.1| BMAL1b [Homo sapiens]
Length = 626
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|397494731|ref|XP_003818225.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Pan paniscus]
gi|410044844|ref|XP_001171687.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 3 [Pan troglodytes]
gi|33860123|sp|O00327.2|BMAL1_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP3; AltName: Full=Brain and muscle ARNT-like
1; AltName: Full=Class E basic helix-loop-helix protein
5; Short=bHLHe5; AltName: Full=Member of PAS protein 3;
AltName: Full=PAS domain-containing protein 3; AltName:
Full=bHLH-PAS protein JAP3
gi|1698576|gb|AAB37248.1| bHLH-PAS protein JAP3 [Homo sapiens]
gi|3170267|gb|AAC24353.1| basic-helix-loop-helix-PAS orphan MOP3 [Homo sapiens]
gi|119588910|gb|EAW68504.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Homo sapiens]
gi|119588916|gb|EAW68510.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Homo sapiens]
gi|158256452|dbj|BAF84199.1| unnamed protein product [Homo sapiens]
gi|261858376|dbj|BAI45710.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
gi|410222708|gb|JAA08573.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410222712|gb|JAA08575.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253944|gb|JAA14939.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253948|gb|JAA14941.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301876|gb|JAA29538.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301878|gb|JAA29539.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335571|gb|JAA36732.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335575|gb|JAA36734.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 626
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|417403449|gb|JAA48528.1| Putative aryl-hydrocarbon receptor nuclear translocator [Desmodus
rotundus]
Length = 626
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|119588918|gb|EAW68512.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_i
[Homo sapiens]
Length = 627
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|189054791|dbj|BAG37615.1| unnamed protein product [Homo sapiens]
Length = 626
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|296217591|ref|XP_002755108.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Callithrix jacchus]
gi|390470247|ref|XP_003734262.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Callithrix jacchus]
Length = 626
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|397494733|ref|XP_003818226.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Pan paniscus]
gi|410044850|ref|XP_003951889.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|426367512|ref|XP_004050775.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Gorilla gorilla gorilla]
Length = 633
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 339
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|126352624|ref|NP_001075390.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Equus caballus]
gi|150385716|sp|A0MLS5.1|BMAL1_HORSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|116256287|gb|ABJ90473.1| brain and muscle ARNT-like protein 1 [Equus caballus]
Length = 626
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|390470249|ref|XP_003734263.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Callithrix jacchus]
Length = 633
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 339
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|383872274|ref|NP_001244766.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Macaca mulatta]
gi|355566711|gb|EHH23090.1| Brain and muscle ARNT-like 1 [Macaca mulatta]
gi|355752314|gb|EHH56434.1| Brain and muscle ARNT-like 1 [Macaca fascicularis]
gi|380812758|gb|AFE78253.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|383418371|gb|AFH32399.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|383418373|gb|AFH32400.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
Length = 626
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|81916240|sp|Q91YA9.1|BMAL1_SPAGA RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|16549046|emb|CAC85406.1| MOP3 protein [Spalax galili]
Length = 626
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G L E
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMG--LDE-- 300
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+N++D+ G + C VAIG +P PA D
Sbjct: 301 ---DNEADS--EGCNLS-----------------------CLVAIGRLHSHVVPQPAGGD 332
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IKVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|2104216|dbj|BAA19968.1| BMAL1a [Homo sapiens]
gi|71052191|gb|AAH31214.1| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|112180372|gb|AAH16674.1| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|119588917|gb|EAW68511.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_h
[Homo sapiens]
gi|410222710|gb|JAA08574.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253946|gb|JAA14940.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301880|gb|JAA29540.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335573|gb|JAA36733.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 583
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 255
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 256 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 289
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 342
>gi|441646081|ref|XP_004090715.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 [Nomascus leucogenys]
Length = 633
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 305
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 306 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 339
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 392
>gi|348503838|ref|XP_003439469.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Oreochromis niloticus]
Length = 620
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 187 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 246
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 247 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 299
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P+ D
Sbjct: 300 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPSLAD 333
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 334 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDISHL 386
>gi|115349961|gb|ABI95426.1| brain and muscle ARNT-like 1 protein [Haplochromis burtoni]
Length = 620
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 187 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 246
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 247 SFFCRMKCNRQSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 299
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P+ D
Sbjct: 300 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPSLAD 333
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 334 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDISHL 386
>gi|335289857|ref|XP_003127301.2| PREDICTED: neuronal PAS domain-containing protein 1-like [Sus
scrofa]
Length = 594
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 83/237 (35%), Gaps = 93/237 (39%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--------------------------TEDIR 35
+V+L G S+++ HP DHSEV L T +I
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRAPTSGPPTPPSVPSSSSSSSSSSSFADTPEIE 233
Query: 36 A------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
A +RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 ASPTEMSPSSRVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL------------ 279
Query: 84 LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY 143
R A+ VA+G +P
Sbjct: 280 ----------------RARAL------------------------GLVALGHTLPPAPLA 299
Query: 144 DVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++PL + + SL + + + D + P + +S + F H QD+ I+ +
Sbjct: 300 ELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQS 356
>gi|432949737|ref|XP_004084233.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Oryzias latipes]
Length = 639
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 206 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 265
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 266 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 318
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P+ D
Sbjct: 319 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPSPAD 352
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 353 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDINHL 405
>gi|241826831|ref|XP_002416629.1| aryl hydrocarbon receptor nuclear translocator, putative [Ixodes
scapularis]
gi|215511093|gb|EEC20546.1| aryl hydrocarbon receptor nuclear translocator, putative [Ixodes
scapularis]
Length = 382
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 51/149 (34%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
+ Y V+HCTG+ ++N P+ +G+
Sbjct: 227 GSAYAVVHCTGY-IKNWPPSEDGA------------------------------------ 249
Query: 119 KRRVVTEPSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFL 172
SHC VAIG + P D+ S + F+++H++D KFT+ D + L
Sbjct: 250 --------SHCCLVAIGRLQVTSAPNASDLVGSNSNAEFISRHAMDGKFTFVDPRVTAVL 301
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
G+ P + K+ FDF H +D H+++ F+
Sbjct: 302 GYQPQELLGKTCFDFFHPEDQSHMKDNFE 330
>gi|47204443|emb|CAG13520.1| unnamed protein product [Tetraodon nigroviridis]
Length = 366
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ + A+RS F+R+KC L RN
Sbjct: 146 QVELTGNSIYEYVHPADHEELAAVLTAHPPCHSHFFHEYEAERSFFLRMKCVLAK--RNA 203
Query: 56 NVKAATYKV 64
+ YKV
Sbjct: 204 GLTCGGYKV 212
>gi|148704809|gb|EDL36756.1| neuronal PAS domain protein 3 [Mus musculus]
Length = 703
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 43/163 (26%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDN 90
T D +RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G T+
Sbjct: 49 TTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRTV------ 99
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS-Q 149
P + +G V + +P P +V +
Sbjct: 100 ---------------------PSQIMG------------LVVVAHALPPPTINEVRIDCH 126
Query: 150 TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 127 MFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAED 169
>gi|441646078|ref|XP_003255009.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Nomascus leucogenys]
Length = 625
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|402894183|ref|XP_003910250.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 [Papio anubis]
Length = 668
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 228 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 287
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 288 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 340
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 341 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 374
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 375 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 427
>gi|432949739|ref|XP_004084234.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Oryzias latipes]
Length = 622
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 189 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 248
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 249 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 301
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP----IPHPANYD 144
+D+EP+ E C VAIG +P P+ D
Sbjct: 302 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHPHIVPQPSPAD 335
Query: 145 VPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + T ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 336 IRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDINHL 388
>gi|197099616|ref|NP_001126900.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Pongo abelii]
gi|75070447|sp|Q5R4T2.1|BMAL1_PONAB RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|55733099|emb|CAH93234.1| hypothetical protein [Pongo abelii]
Length = 625
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|156717516|ref|NP_001096298.1| uncharacterized protein LOC100124875 [Xenopus (Silurana)
tropicalis]
gi|134023843|gb|AAI35612.1| LOC100124875 protein [Xenopus (Silurana) tropicalis]
Length = 594
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 91/232 (39%), Gaps = 71/232 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSAN-------------------HTEDIR----AQRSV 40
DLMG+S+++ HP D ++VK LS++ H + R ++RS
Sbjct: 186 DLMGKSLFDFLHPKDVAKVKEQLSSSDIAPREKLIDAKTGLQVHTHFQASRLHWGSRRSF 245
Query: 41 FIRLKCTLTSKG------RNVNVKA-ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIEN 93
F R+K + RN K Y IHCTG+L P S
Sbjct: 246 FCRMKSGRANHKEEKDFLRNSKRKDHRRYCTIHCTGYL--RSCPPS-------------- 289
Query: 94 QSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVPLSQT 150
EEE R S C VAIG P+ P N +V + T
Sbjct: 290 -------------------EEECDTDREAPN--SRCLVAIGRLHPYITPQNSSEVKVKPT 328
Query: 151 -FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
F+T++++D KF Y D+ LG+ P + S +++ H D H+ + K
Sbjct: 329 EFVTRYTMDGKFVYVDQRATAILGYLPQELLGTSCYEYFHIDDYGHLTDRHK 380
>gi|42716311|ref|NP_001169.3| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Homo sapiens]
gi|71852580|ref|NP_001025443.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Homo sapiens]
gi|410044846|ref|XP_003951887.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|426367508|ref|XP_004050773.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|37589937|gb|AAH41129.2| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|119588919|gb|EAW68513.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_j
[Homo sapiens]
gi|167773115|gb|ABZ91992.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
gi|325463663|gb|ADZ15602.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
Length = 625
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|403254270|ref|XP_003919896.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Saimiri boliviensis boliviensis]
Length = 625
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|384942802|gb|AFI35006.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|384942804|gb|AFI35007.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
Length = 625
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|71852582|ref|NP_001025444.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform b [Homo sapiens]
gi|426367510|ref|XP_004050774.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|119588911|gb|EAW68505.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Homo sapiens]
gi|121646995|gb|ABM64205.1| aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|193788226|dbj|BAG53120.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 254
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 255 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 289
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 341
>gi|395815280|ref|XP_003781159.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Otolemur garnettii]
Length = 625
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDITKVKEQLSSSDTTPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 298 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGEI 332
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 384
>gi|395815284|ref|XP_003781161.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Otolemur garnettii]
Length = 632
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 193 DLIGQSLFDYLHPKDITKVKEQLSSSDTTPRERLIDAKTGLPVKTDITPGPSRLCSGARR 252
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 253 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 304
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 305 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGEI 339
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 340 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 391
>gi|444730401|gb|ELW70787.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Tupaia chinensis]
Length = 571
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 54/198 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYK 63
DL+GQS+++ HP D ++VK LS++ T A R I K ++
Sbjct: 181 DLIGQSLFDYLHPKDIAKVKEQLSSSDT----APRERLIDAK------------NRKSFC 224
Query: 64 VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVV 123
IH TG+L ++ P G +D+EP+ E
Sbjct: 225 TIHSTGYL-KSWPPTKMGL------------------------DEDNEPDNEGCNL---- 255
Query: 124 TEPSHCFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDI 178
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P
Sbjct: 256 ----SCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 311
Query: 179 FIAKSVFDFHHAQDSFHI 196
+ S +++ H D H+
Sbjct: 312 LLGTSCYEYFHQDDIGHL 329
>gi|112790730|gb|ABI21880.1| cycle [Lutzomyia longipalpis]
Length = 622
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 80/236 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 151 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGLSRLCPGARR 210
Query: 39 SVFIRLKCTLT------------SKGRNVNVKA-ATYKVIHCTGHLVQNQTPASNGSTLM 85
S F R+K + S R + + Y VI CTG+L ++ PA G +
Sbjct: 211 SFFCRMKYKASIQVKEELDAPANSHRRKKQMSSDKKYSVIQCTGYL-KSWAPAKIG---L 266
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY 143
E Q+ + +S N C VAIG P+ N
Sbjct: 267 EEQEADDGESCNL-----------------------------SCLVAIGRIPPNIFVPNV 297
Query: 144 DVPLSQT-------FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
P+S F+++H++D KF + D+ LGF P + S+++++H +D
Sbjct: 298 TPPISNNLNLRSIQFISRHAMDGKFLFVDQRATLILGFLPQELLGTSMYEYYHHED 353
>gi|403254272|ref|XP_003919897.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Saimiri boliviensis boliviensis]
Length = 582
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 254
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 255 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 289
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 341
>gi|350584322|ref|XP_003355586.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Sus scrofa]
Length = 725
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 69/236 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------------HTEDIR----A 36
+ L GQS+++ HP D ++VK LS++ HTE R +
Sbjct: 323 QASLTGQSLFDFLHPKDVAKVKEQLSSSDISPREKLMDAKTGLQVHSNFHTERSRVYSGS 382
Query: 37 QRSVFIRLK-CTLTSKGRN---VNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + N K Y+ +HCTG+L ++ P G ME +
Sbjct: 383 RRSFFCRMKSCKISVKEEHECLSNSKKKDYRKFCTVHCTGYL-RSWPPNIVG---MEEER 438
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
+ + S N C VAIG P+ P N ++
Sbjct: 439 DAKKDSRNFT-----------------------------CLVAIGRLHPYIVPQNSGEIQ 469
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ N K
Sbjct: 470 VKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTNKHK 525
>gi|395815282|ref|XP_003781160.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Otolemur garnettii]
Length = 582
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDITKVKEQLSSSDTTPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 254
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 255 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPVNGEI 289
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ S ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 341
>gi|348559906|ref|XP_003465756.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 3 [Cavia porcellus]
Length = 613
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 173 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 232
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 233 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 285
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 286 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 319
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + + ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 320 IRVKAMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 372
>gi|262477852|gb|ACY68224.1| tango [Tipula abdominalis]
Length = 313
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 76/243 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSA--------------------NHTEDIR----AQRS 39
D G S+YE HP D +V+ LS H +R ++R
Sbjct: 61 DWYGSSMYENIHPDDIEKVREQLSTQEPQNTGRILDLKTGTVKKEGHQSSMRLCLGSRRG 120
Query: 40 VFIRLKCTLTS------------KGRNV---NVKAATYKVIHCTGHLVQNQTPASNGSTL 84
R+K + K RN + Y V+HCTG+ ++N P T
Sbjct: 121 FICRMKVGNVTAEAMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGY-IKNWPP-----TD 174
Query: 85 MEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSH-CFVAIGE----PIPH 139
M P ++ Q + DD +H C VAIG +
Sbjct: 175 MFPGVQLDRQGE-----------DD--------------LHSTHCCLVAIGRLQVTSTAN 209
Query: 140 PANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQN 198
++ + SQT F+++HS+D KF++ D+ + + LG+ P + KS ++F H +D H++
Sbjct: 210 QSDINGSNSQTEFISRHSIDGKFSFVDQRVINVLGYTPAELLGKSCYEFFHPEDQNHMKE 269
Query: 199 AFK 201
F+
Sbjct: 270 NFE 272
>gi|203285604|gb|ACH97390.1| tango [Ceratitis divaricata]
Length = 141
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 34/146 (23%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 22 GTNYAVVHCTGY-IKNWPP-----TDMXPGVHMERPVDDDMHASHC-------------- 61
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D T+ D+ + + LG+
Sbjct: 62 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGXXTFVDQRVMNVLGY 111
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAF 200
+P + K +DF HA+D +++++F
Sbjct: 112 SPTDLLGKICYDFCHAEDQMNVKDSF 137
>gi|95007803|dbj|BAE94238.1| aryl hydrocarbone receptor nuclear translocator [Daphnia magna]
Length = 669
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 38/145 (26%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N P+ P D D++ GS
Sbjct: 264 YAVVHCTGY-IKNWPPSG------VPMD--RGVDDDSHSGSHC----------------- 297
Query: 122 VVTEPSHCFVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNP 176
C VAIG + P D+ S + F+++HS D KFT+ D+ + LG++P
Sbjct: 298 -------CLVAIGRLQVTSTPNTSDLVGSNSAAEFISRHSADGKFTFVDQRALNLLGYSP 350
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFK 201
+ K FDF H +D H++ +F+
Sbjct: 351 PELLGKICFDFFHPEDVSHMKESFE 375
>gi|95007805|dbj|BAE94239.1| aryl hydrocarbone receptor nuclear translocator [Daphnia magna]
Length = 668
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 38/145 (26%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N P+ P D D++ GS
Sbjct: 263 YAVVHCTGY-IKNWPPSG------VPMD--RGVDDDSHSGSHC----------------- 296
Query: 122 VVTEPSHCFVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNP 176
C VAIG + P D+ S + F+++HS D KFT+ D+ + LG++P
Sbjct: 297 -------CLVAIGRLQVTSTPNTSDLVGSNSAAEFISRHSADGKFTFVDQRALNLLGYSP 349
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFK 201
+ K FDF H +D H++ +F+
Sbjct: 350 PELLGKICFDFFHPEDVSHMKESFE 374
>gi|326675477|ref|XP_003200364.1| PREDICTED: neuronal PAS domain-containing protein 3-like [Danio
rerio]
Length = 721
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 43/184 (23%)
Query: 17 CDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
C + V+S + + D +RS FIR+K TLT +G V++K++ YKVIH TG L
Sbjct: 18 CVLAAVESSSPSLLSPDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL----- 70
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEP 136
I ++R S P + +G V +
Sbjct: 71 -------------RIRMALTHSR----------SVPNQIMG------------MVVVAHA 95
Query: 137 IPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
+P P +V + Q F+T+ ++D+ Y + + D++ P + K + F HA+D
Sbjct: 96 LPPPTINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEG 155
Query: 196 IQNA 199
I+ +
Sbjct: 156 IRQS 159
>gi|307212674|gb|EFN88377.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Harpegnathos saltator]
Length = 877
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 97/253 (38%), Gaps = 92/253 (36%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 421 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGARR 480
Query: 39 SVFIRLK----------------------CTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
S F R+K C K +NV+ K Y VI CTG+L ++
Sbjct: 481 SFFCRMKRKVEGVRCGEMQVKEEADTTTGCHRRKKQQNVDWK---YCVIQCTGYL-KSWA 536
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE- 135
PA G L E + + ++ N C VA+G
Sbjct: 537 PAKIG--LEEQEGEADGEACNL-----------------------------SCLVAVGRI 565
Query: 136 -------PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
+P + P+ F+++H++D KF + D+ LGF P + S+++++
Sbjct: 566 QTAISTAALPSRKPHLRPIQ--FVSRHAMDGKFLFVDQRATPVLGFLPQELLGTSMYEYY 623
Query: 189 HAQDSFHIQNAFK 201
H D H+ + K
Sbjct: 624 HHDDIPHLAESHK 636
>gi|348559902|ref|XP_003465754.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Cavia porcellus]
Length = 626
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + + ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKAMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|440900375|gb|ELR51526.1| hypothetical protein M91_13238 [Bos grunniens mutus]
Length = 634
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE------DIRA------------------- 36
+ L+GQS+++ HP D S+VK LS++ D +A
Sbjct: 218 QASLIGQSLFDFLHPKDVSKVKEQLSSSDISPREKLIDAKAALQVHSNFHTSKSHVYSGS 277
Query: 37 QRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + + + K +HCTG+L ++ N + + E +D
Sbjct: 278 RRSFFCRIKSCKISVKEEHEYLPNSKKKDHRKFCTVHCTGYL---RSWPPNIAGMEEERD 334
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N +++S+ T C VA+G PH P N ++
Sbjct: 335 NKKDRSNFT------------------------------CLVAVGRLRPHIVPQNSGEIK 364
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 365 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 411
>gi|351714673|gb|EHB17592.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Heterocephalus glaber]
Length = 627
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 73/233 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCT----------LTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
S F R+KC S ++ IH TG+L ++ P G
Sbjct: 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGL------ 298
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYD 144
+D+EP+ E C VAIG +P P N +
Sbjct: 299 ------------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGE 332
Query: 145 VPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + + ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 333 IRVKAMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
>gi|1695805|gb|AAC51214.1| MOP5 [Homo sapiens]
Length = 481
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 83/234 (35%), Gaps = 90/234 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 65 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 124
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLME 86
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 125 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL--------------- 167
Query: 87 PQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVP 146
R A+ VA+G +P ++P
Sbjct: 168 -------------RAHAL------------------------GLVALGHTLPPAPLAELP 190
Query: 147 L-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
L + + SL + + + D + P + +S + F H QD+ I+ +
Sbjct: 191 LHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQS 244
>gi|119892837|ref|XP_615908.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Bos taurus]
gi|297475095|ref|XP_002687774.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Bos taurus]
gi|296487336|tpg|DAA29449.1| TPA: aryl hydrocarbon receptor nuclear translocator-like 2-like
[Bos taurus]
Length = 704
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE------DIRA------------------- 36
+ L+GQS+++ HP D S+VK LS++ D +A
Sbjct: 288 QASLIGQSLFDFLHPKDVSKVKEQLSSSDISPREKLIDAKAALQVHSNFHTSKSHVYSGS 347
Query: 37 QRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + + + K +HCTG+L ++ N + + E +D
Sbjct: 348 RRSFFCRIKSCKISVKEEHEYLPNSKKKDHRKFCTVHCTGYL---RSWPPNIAGMEEERD 404
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N +++S+ T C VA+G PH P N ++
Sbjct: 405 NKKDRSNFT------------------------------CLVAVGRLQPHIVPQNSGEIK 434
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 435 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 481
>gi|203285572|gb|ACH97374.1| tango [Ceratitis cornuta]
Length = 116
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 34/138 (24%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 9 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 48
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 49 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 98
Query: 175 NPDIFIAKSVFDFHHAQD 192
+P + K +DF HA+D
Sbjct: 99 SPTXLLGKICYDFCHAED 116
>gi|348559904|ref|XP_003465755.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Cavia porcellus]
Length = 582
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 72/232 (31%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 143 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 202
Query: 39 SVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLMEPQD 89
S F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 203 SFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGL------- 254
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDV 145
+D+EP+ E C VAIG +P P N ++
Sbjct: 255 -----------------DEDNEPDNEGCNL--------SCLVAIGRLHSHVVPQPVNGEI 289
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + ++++H++D KF + D+ L + P + S +++ H D H+
Sbjct: 290 RVKAMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 341
>gi|383860213|ref|XP_003705585.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Megachile rotundata]
Length = 899
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 97/251 (38%), Gaps = 90/251 (35%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 442 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGARR 501
Query: 39 SVFIRLK----------------------CTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
S F R+K C K +NV+ K Y VI CTG+L ++
Sbjct: 502 SFFCRMKRKVDGIRCGELQVKEEADTTSGCHRRKKQQNVDWK---YCVIQCTGYL-KSWA 557
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE- 135
PA K D E +E G+ C VA+G
Sbjct: 558 PA----------------------------KIDLEEQEGDGDGEACNLS---CLVAVGRL 586
Query: 136 ----PIPHPANYDV-PLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHA 190
P P ++ P+ F+++H++D KF + D+ LGF P + S+++++H
Sbjct: 587 QSTIPTSLPKKPNLRPIK--FVSRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHH 644
Query: 191 QDSFHIQNAFK 201
D H+ + K
Sbjct: 645 DDIPHLAKSHK 655
>gi|348506030|ref|XP_003440563.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Oreochromis niloticus]
Length = 620
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 74/235 (31%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT----------------EDI---------RA 36
+ +L+GQS+++ HP D +VK LSA+ D+ A
Sbjct: 187 RAELIGQSLFDYIHPKDMGKVKEQLSASELYPRERLIDAKTGLQVQADLPIGAARLCSGA 246
Query: 37 QRSVFIRLKCTLTS--------KGRNVNVK-AATYKVIHCTGHLVQNQTPASNGSTLMEP 87
+RS F R+K S +G K + Y +HCTG++ P S
Sbjct: 247 RRSFFCRMKYNKISVKVEEKESQGNASKKKESQKYCTVHCTGYM--RSWPTS-------- 296
Query: 88 QDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSH--CFVAIGEPIPHPA---N 142
+ +E E EV ++ E SH C VA+G H + N
Sbjct: 297 -------------------QLGAEGEGEVDKQ-----ESSHFSCLVAVGRVHNHSSPQVN 332
Query: 143 YDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+V + T F+T++++D KFT+ D+ LG+ P + S +++ H D H+
Sbjct: 333 GEVRVKPTEFITRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHQDDLPHL 387
>gi|395854216|ref|XP_003799594.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Otolemur garnettii]
gi|395854218|ref|XP_003799595.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Otolemur garnettii]
Length = 591
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 36/104 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH----------------------TEDIRA--- 36
+V+L G S+++ HP DHSEV L T +I A
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRAPAPGPPTPPSVSSSSSSSSLADTPEIEASPT 233
Query: 37 ---------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 KAPPSSLVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL 275
>gi|351697945|gb|EHB00864.1| Neuronal PAS domain-containing protein 1 [Heterocephalus glaber]
Length = 552
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 81/235 (34%), Gaps = 91/235 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------- 27
+V+L G S+++ HP DH+EV L
Sbjct: 172 QVELTGSSVFDYIHPGDHTEVLEQLGLRARTPGPPTPPSVSSSSSSSSSSQADIPEIDAS 231
Query: 28 -ANHTEDIRAQ-RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLM 85
A R Q RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 232 PAEAPPSARVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL-------------- 275
Query: 86 EPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDV 145
R A+ VA+G +P ++
Sbjct: 276 --------------RARALG------------------------LVALGHTLPPAPLAEL 297
Query: 146 PL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
PL + + SL + + + D + P + +S + F H QD+ I+ +
Sbjct: 298 PLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQS 352
>gi|118404610|ref|NP_001072647.1| neuronal PAS domain protein 3 [Xenopus (Silurana) tropicalis]
gi|115312943|gb|AAI23930.1| neuronal PAS domain protein 3 [Xenopus (Silurana) tropicalis]
Length = 899
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 82/238 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTED----------------I 34
+V+L G S+++ HP DH E+ + +LS + +D +
Sbjct: 156 QVELTGSSMFDYVHPGDHVEMAEQLGMKLPPGRGLLSQSANDDGASSASSSSQSETPEPV 215
Query: 35 RA------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
A +RS FIR+K TLT +G V++K++ YKVIH TG L
Sbjct: 216 EATSPGILPQDNSLERSFFIRMKSTLTKRG--VHIKSSGYKVIHVTGRL----------- 262
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ + R G+ + +G V + +P P
Sbjct: 263 -------RLRVSLSHGRSGAG----------QVMG------------LVVVAHALPPPTI 293
Query: 143 YDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
+V + F+T+ +LD+ Y + + D++ N + K + F HA+D I+++
Sbjct: 294 NEVRIDCHMFVTRVNLDLNIIYCENRISDYMDLNAVDLMGKRCYHFIHAEDVEGIRHS 351
>gi|15147217|gb|AAK12621.1| brain-muscle-ARNT-like protein 2c [Rattus norvegicus]
Length = 534
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 69/237 (29%)
Query: 1 MKVDLMGQSIYEVTHPCDHSEVKSILSAN------------------HTEDIRAQ----- 37
+K LMGQ++++ HP D ++VK LS + H+ R++
Sbjct: 121 LKASLMGQNLFDFLHPKDVAKVKEQLSCDVSLREKPIGTKTSPQVHSHSHIGRSRVHSGS 180
Query: 38 -RSVFIRLK--CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQ 88
RS F R+K CT+ K + K IHCTG+L ++ P G+
Sbjct: 181 RRSFFFRMKSSCTVPVKEEQRCSSCSKKKDQRKFHTIHCTGYL-RSWPPNVVGT------ 233
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH---PANYDV 145
E+E+G + + P C VA+G P+ P N +
Sbjct: 234 ------------------------EKEMGSGKD--SGPLTCLVAMGRLQPYTVPPKNGKI 267
Query: 146 PLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ + K
Sbjct: 268 NVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHK 324
>gi|262477848|gb|ACY68222.1| tango [Chironomus tepperi]
Length = 313
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 37/148 (25%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T + P ++ Q ++DD
Sbjct: 155 GQNYAVVHCTGY-IKNWPP-----TDLFPGVQLDRQ-----------NEDD--------- 188
Query: 119 KRRVVTEPSHC-FVAIGE----PIPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFL 172
SHC VAIG + A+ + +Q+ F+++HS+D KF++ D+ + + L
Sbjct: 189 -----LHSSHCCLVAIGRLQVTSTANSADLNGSNNQSEFISRHSMDGKFSFVDQRVMNVL 243
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
G+ P ++KS +DF H +D H++ F
Sbjct: 244 GYVPTDLLSKSCYDFFHPEDQNHMKENF 271
>gi|440913142|gb|ELR62630.1| hypothetical protein M91_01346 [Bos grunniens mutus]
Length = 644
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 53/239 (22%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DIR---------AQR 38
DL+GQS+++ HP D ++VK LS++ T DI A+R
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
Query: 39 SVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQS-DN 97
S F R+KC S V V+ + C+ ++ + ST + ++ +S
Sbjct: 246 SFFCRMKCNRPS----VKVEDKDFPST-CSKKKADRKSFCTIHSTALIVVYHVYLKSWPP 300
Query: 98 TRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE----PIPHPANYDVPL-SQTFL 152
T+ G +D+EP+ E C VAIG +P PAN ++ + S ++
Sbjct: 301 TKMGL----DEDNEPDNEGCNL--------SCLVAIGRLHSHMVPQPANGEIRVKSMEYV 348
Query: 153 TKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPCYSCVIKS 211
++H++D KF + D+ L + P + S +++ H D H+ C+ V++S
Sbjct: 349 SRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAE-----CHRQVLQS 402
>gi|332232982|ref|XP_003265683.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 3 [Nomascus leucogenys]
Length = 622
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------------HTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 205 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNFHTGRTRVYSGS 264
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K GR N K ++ IHCTG+L ++ P+ G ME +
Sbjct: 265 RRSFFCRIKSCKISVKEEHGRLPNSKKKEHRKFYTIHCTGYL-RSWPPSIVG---MEEER 320
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 321 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 351
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 352 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 398
>gi|431909210|gb|ELK12800.1| Neuronal PAS domain-containing protein 1 [Pteropus alecto]
Length = 594
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 83/237 (35%), Gaps = 93/237 (39%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--------------------------TEDIR 35
+V+L G S+++ HP DHSEV L T +I
Sbjct: 174 QVELTGSSVFDYIHPGDHSEVLEQLGLRARIPGPPTPPSVPSSSSSSSSSSSLADTPEIE 233
Query: 36 A------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
A +RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 AGPTEVPASARVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL------------ 279
Query: 84 LMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANY 143
R A+ VA+G +P
Sbjct: 280 ----------------RARAL------------------------GLVALGHTLPPAPLA 299
Query: 144 DVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
++PL + + SL + + + + + P + +S + F H QD+ I+ +
Sbjct: 300 ELPLHGHMIVFRLSLGLTILACESRVSEHMDLGPSELVGRSCYQFVHGQDAARIRQS 356
>gi|410919123|ref|XP_003973034.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Takifugu rubripes]
Length = 538
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 80/237 (33%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR------------------------AQR 38
++L GQS+++ HP D S+VK L+++ + R A+R
Sbjct: 119 LELTGQSLFDFIHPKDISKVKEQLASSELHNHRLADAAAGVPVQADAPLRPSVLTTGARR 178
Query: 39 SVFIRLK------------CTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLME 86
+ F R+K TSK ++ A Y +HCTG++ + +
Sbjct: 179 AFFCRMKHSRVMGKHDKHALPSTSKKKD----AYRYCTLHCTGYM----------RSWLS 224
Query: 87 PQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIP----HPAN 142
Q + E + DKD S P C V + +P HP
Sbjct: 225 SQLDAEGDA---------ADKDASSPT---------------CLVTVCRLLPPGSHHPPR 260
Query: 143 YDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQN 198
DVP+ F+T+ ++D KFT+ D LG+ P + S +++ H D H+ +
Sbjct: 261 -DVPVKPAEFMTRCAIDGKFTFVDHRATALLGYLPQEILGTSCYEYFHQDDLQHLAD 316
>gi|307186380|gb|EFN72014.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Camponotus floridanus]
Length = 890
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 92/253 (36%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 433 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGARR 492
Query: 39 SVFIRLK----------------------CTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
S F R+K C K +NV+ K Y VI CTG+L ++
Sbjct: 493 SFFCRMKRKVDGVRCDEMQVKEEVDTTTGCHRRKKQQNVDRK---YCVIQCTGYL-KSWA 548
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE- 135
PA G EE+ GE S C +A+G
Sbjct: 549 PAKIGL------------------------------EEQEGEADGEACNLS-CLIAVGRV 577
Query: 136 -------PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
+P + P+ F+++H++D KF + D+ LGF P + S+++++
Sbjct: 578 QMAISTTTLPSRKPHLRPIQ--FVSRHAMDGKFLFVDQRATPVLGFLPQELLGTSMYEYY 635
Query: 189 HAQDSFHIQNAFK 201
H D H+ + K
Sbjct: 636 HHDDIPHLAESHK 648
>gi|307168322|gb|EFN61528.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Camponotus floridanus]
Length = 612
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 98/248 (39%), Gaps = 67/248 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-----------------AQRSV 40
D G S+Y HP D +V+ LSA + D++ ++R
Sbjct: 99 DWYGTSLYSQVHPDDTEKVREQLSAAEPQHGGRVLDLKTGTVKKEGQSSMRLCMGSRRGF 158
Query: 41 FIRLKC-TLTSKG-------------RNVNVKAA----TYKVIHCTGHLVQNQTPASNGS 82
R+K L + G RN A Y V+HCTG+ ++N P +
Sbjct: 159 ICRMKVGNLQTTGDMAAAHGLHRIKQRNSLGPPARDGQNYAVVHCTGY-IKNWPPTGDFV 217
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSH----CFVAIG--EP 136
P + + R IQ D VVT+ + C VAIG +
Sbjct: 218 PPCVPGVGLGD-----RGSGGIQTGPDG-----------VVTDENATTHCCLVAIGRLQV 261
Query: 137 IPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
P + D+ S + F+++HS + KFT+ D+ + LG+ P + ++F H +D
Sbjct: 262 TSTPNSSDLAGSNSNSEFISRHSAEGKFTFVDQRVGGILGYTPSELLGHPCYEFFHPEDL 321
Query: 194 FHIQNAFK 201
H++ +F+
Sbjct: 322 THMRESFE 329
>gi|147903135|ref|NP_001080540.1| aryl-hydrocarbon receptor nuclear translocator 2 [Xenopus laevis]
gi|28278683|gb|AAH44268.1| Arnt2-prov protein [Xenopus laevis]
Length = 668
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 81/246 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE THP D +++ L + + D++ ++RS
Sbjct: 165 EWFGSNLYEHTHPDDIEKLREQLCTSESSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 224
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
RL+C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 225 FICRLRCGNAPLDHLSLNRISTMRKRYRNGLGPVKEGEAQYSVVHCTGY-IKAWPPA--- 280
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 281 -------------------GITIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 310
Query: 140 PANYDV---PLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D+ L FL++HS + T+ D +G+ P + K + +F H +D H+
Sbjct: 311 PGCLDMNGMSLPTEFLSRHSTEGVITFVDPRCISIIGYQPQELLGKDIIEFCHPEDQSHL 370
Query: 197 QNAFKN 202
+ +F+
Sbjct: 371 RESFQQ 376
>gi|3283366|gb|AAC39124.1| bHLH-PAS protein CYCLE [Drosophila melanogaster]
Length = 413
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 94/247 (38%), Gaps = 94/247 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQ 75
+RS F R+K S N +K + Y+VI CTG+L ++
Sbjct: 204 RRSFFCRMKLRTAS---NNQIKEESDTSSSSRSSTKRKSRLSTGHKYRVIQCTGYL-KSW 259
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIG 134
TP I+D+D D++ +E+ T C VAIG
Sbjct: 260 TP--------------------------IKDEDQDADSDEQ--------TTNLSCLVAIG 285
Query: 135 EPIPHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVF 185
P+ N VP S F+++HS + KF + D+ +GF P + S +
Sbjct: 286 RIPPNVRNSTVPASLDNHPNIRYVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFY 345
Query: 186 DFHHAQD 192
++ H +D
Sbjct: 346 EYFHNED 352
>gi|332232980|ref|XP_003265682.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Nomascus leucogenys]
Length = 636
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------------HTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 219 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNFHTGRTRVYSGS 278
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K GR N K ++ IHCTG+L ++ P+ G ME +
Sbjct: 279 RRSFFCRIKSCKISVKEEHGRLPNSKKKEHRKFYTIHCTGYL-RSWPPSIVG---MEEER 334
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 335 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 365
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 366 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 412
>gi|312618452|gb|ADR00346.1| hypoxia inducible factor 1 alpha subunit [Bos grunniens]
Length = 48
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/29 (68%), Positives = 28/29 (96%)
Query: 43 RLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
R+KCTLTS+GR +N+K+AT+KV+HCTGH+
Sbjct: 1 RMKCTLTSRGRTMNIKSATWKVLHCTGHI 29
>gi|3192865|gb|AAD10629.1| brain and muscle ARNT-like 1 [Drosophila melanogaster]
gi|3219728|gb|AAC62235.1| MOP3 [Drosophila melanogaster]
gi|21430932|gb|AAM51144.1| SD27452p [Drosophila melanogaster]
Length = 413
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 94/247 (38%), Gaps = 94/247 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQ 75
+RS F R+K S N +K + Y+VI CTG+L ++
Sbjct: 204 RRSFFCRMKLRTAS---NNQIKEESDTSSSSRSSTKRKSRLSTGHKYRVIQCTGYL-KSW 259
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIG 134
TP I+D+D D++ +E+ T C VAIG
Sbjct: 260 TP--------------------------IKDEDQDADSDEQ--------TTNLSCLVAIG 285
Query: 135 EPIPHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVF 185
P+ N VP S F+++HS + KF + D+ +GF P + S +
Sbjct: 286 RIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFY 345
Query: 186 DFHHAQD 192
++ H +D
Sbjct: 346 EYFHNED 352
>gi|24667005|ref|NP_524168.2| cycle [Drosophila melanogaster]
gi|152031583|sp|O61734.2|CYCL_DROME RecName: Full=Protein cycle; AltName: Full=Brain and muscle
ARNT-like 1; Short=BMAL1; AltName: Full=MOP3
gi|7293738|gb|AAF49107.1| cycle [Drosophila melanogaster]
gi|94400444|gb|ABF17888.1| FI01122p [Drosophila melanogaster]
gi|220952316|gb|ACL88701.1| cyc-PA [synthetic construct]
gi|220958734|gb|ACL91910.1| cyc-PA [synthetic construct]
Length = 413
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 94/247 (38%), Gaps = 94/247 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQ 75
+RS F R+K S N +K + Y+VI CTG+L ++
Sbjct: 204 RRSFFCRMKLRTAS---NNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYL-KSW 259
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIG 134
TP I+D+D D++ +E+ T C VAIG
Sbjct: 260 TP--------------------------IKDEDQDADSDEQ--------TTNLSCLVAIG 285
Query: 135 EPIPHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVF 185
P+ N VP S F+++HS + KF + D+ +GF P + S +
Sbjct: 286 RIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFY 345
Query: 186 DFHHAQD 192
++ H +D
Sbjct: 346 EYFHNED 352
>gi|332232978|ref|XP_003265681.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Nomascus leucogenys]
Length = 588
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------------HTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 171 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNFHTGRTRVYSGS 230
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K GR N K ++ IHCTG+L ++ P+ G ME +
Sbjct: 231 RRSFFCRIKSCKISVKEEHGRLPNSKKKEHRKFYTIHCTGYL-RSWPPSIVG---MEEER 286
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 287 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 317
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 318 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 364
>gi|124013527|gb|ABM88008.1| SIM1 [Macaca nemestrina]
Length = 95
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 30 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 87
Query: 56 NVKAATYK 63
+ YK
Sbjct: 88 GLTCGGYK 95
>gi|291413324|ref|XP_002722928.1| PREDICTED: neuronal PAS domain protein 1-like [Oryctolagus
cuniculus]
Length = 568
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 41/109 (37%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------- 27
+V+L G S+++ HP DHSEV L
Sbjct: 148 QVELTGSSVFDYIHPGDHSEVLEQLGLRARTPGPPTPPSVPSSSSSSSSSSSSLADTPDI 207
Query: 28 -ANHTEDIRA----QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
A+ TE R+ +RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 208 EASPTEAPRSSRAQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 254
>gi|203285610|gb|ACH97393.1| tango [Ceratitis bremii]
Length = 133
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 34/138 (24%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 25 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPVDDDMHASHC-------------- 64
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 65 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVINVLGY 114
Query: 175 NPDIFIAKSVFDFHHAQD 192
+P + K +DF HA+D
Sbjct: 115 SPTDLLGKICYDFCHAED 132
>gi|363412368|gb|AEW22978.1| methoprene-tolerant protein [Thermobia domestica]
Length = 516
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 95/269 (35%), Gaps = 94/269 (34%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS---------------------------------- 27
++DLMGQSIY +THP DHSE++ LS
Sbjct: 99 QMDLMGQSIYGITHPDDHSEMRMNLSANNDDSDSSSTDSQSGDDSSSEDASASPQSESSP 158
Query: 28 ---------ANHTED---IRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQ 75
A T D +RS ++RL S+G + Y++IH GHL
Sbjct: 159 RPSETSSSPAATTSDPCQTNQRRSFYVRLAEKAVSRG-----DPSRYELIHIVGHLRVPP 213
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE 135
P + ST QS +R EP V + + V +G
Sbjct: 214 RPEATPST----------QSRRRQR----------EP---------VTSMNDYVLVGVGR 244
Query: 136 PIPHPANYDVPLSQT----FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQ 191
+ ++ L + ++T+H LD + Y D + G+ + S F+F HA+
Sbjct: 245 LVRDRRITELSLMEAVKDEYVTRHLLDGRIIYVDHRISVVAGYLAEEVSGLSAFNFMHAE 304
Query: 192 DSFHIQNAFK----------NPCYSCVIK 210
DS A + N CY + K
Sbjct: 305 DSRWTMIALRQMYGSADGCGNSCYRLLAK 333
>gi|321479053|gb|EFX90009.1| putative aryl hydrocarbon receptor nuclear translocator [Daphnia
pulex]
Length = 669
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 38/145 (26%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ ++N P+ P D D++ GS
Sbjct: 263 YAVVHCTGY-IKNWPPSG------VPMD--RGVDDDSHSGSHC----------------- 296
Query: 122 VVTEPSHCFVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNP 176
C VAIG + P D+ S + F+++HS D KFT+ D+ + LG++P
Sbjct: 297 -------CLVAIGRLQVTSTPNTSDLVGSNSAAEFISRHSADGKFTFVDQRALNLLGYSP 349
Query: 177 DIFIAKSVFDFHHAQDSFHIQNAFK 201
+ K FD H +D H++ +F+
Sbjct: 350 PELLGKICFDLFHPEDVSHMKESFE 374
>gi|195591633|ref|XP_002085543.1| GD12247 [Drosophila simulans]
gi|194197552|gb|EDX11128.1| GD12247 [Drosophila simulans]
Length = 413
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 93/247 (37%), Gaps = 94/247 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQ 75
+RS F R+K S N +K + Y+VI CTG+L ++
Sbjct: 204 RRSFFCRMKLRTAS---NNQIKEESDTSSSSRSSTKRKSRLSTGHKYRVIQCTGYL-KSW 259
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIG 134
TP I+D+D D + +E+ T C VAIG
Sbjct: 260 TP--------------------------IKDEDQDGDSDEQ--------TTNLSCLVAIG 285
Query: 135 EPIPHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVF 185
P+ N VP S F+++HS + KF + D+ +GF P + S +
Sbjct: 286 RIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFY 345
Query: 186 DFHHAQD 192
++ H +D
Sbjct: 346 EYFHNED 352
>gi|449682715|ref|XP_002155628.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Hydra magnipapillata]
Length = 513
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 76/238 (31%)
Query: 5 LMGQSIYEVTHPCDHSEVKSILSANHTEDIR----------------------AQRSVFI 42
+ ++++++ HP D +++ L + ++D R ++RS I
Sbjct: 190 WINRNLFDLVHPEDKDKLRDQLDVSISKDTRIIDLKTASIKAVGNNENCLKSGSRRSFLI 249
Query: 43 RLKCTLTSKGR---------NVNVKAATYK-----VIHCTGHLVQNQTPASNGSTLMEPQ 88
R++C + N N K Y+ V+HCTG++ +
Sbjct: 250 RMRCGDVQNEKSENDIHEVNNCNDKRVIYQDKIYSVVHCTGYI-------------RNIE 296
Query: 89 DNI-ENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPHPANYDV 145
D I + S NT + S E C +AIG +P P + D+
Sbjct: 297 DGILSDLSCNTEQKSK---------------------EDFLCLIAIGRLQPTSMPTSKDI 335
Query: 146 PLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
S + F+T+ +LD +F++ D+ + D LG+ P + K FDF+ +D+ ++ +
Sbjct: 336 LDSSSPCEFITRQTLDGRFSFIDQRVTDVLGYRPIDLLGKLCFDFYLHEDAKYMSENY 393
>gi|270001312|gb|EEZ97759.1| hypothetical protein TcasGA2_TC016204 [Tribolium castaneum]
Length = 438
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-----HTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SIYE HP DH E+ ++LS +D ++R+ F+R+KC L RN
Sbjct: 314 QVELTGNSIYEYIHPADHDEMTAVLSPTIPPLASQQDYESERAFFLRMKCVLAK--RNAG 371
Query: 57 VKAATYKV 64
+ YKV
Sbjct: 372 LTNGGYKV 379
>gi|380030712|ref|XP_003698987.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Apis florea]
Length = 604
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 36/228 (15%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED-----------IRAQRSVFIRLKCTLTSKG 52
D G S+Y HP D +VK LS E+ ++ + +RL C + +G
Sbjct: 98 DWYGTSLYSQVHPDDTEKVKEQLSGAEPENGGRVLDLKTGTVKKEGQSSMRL-CMGSRRG 156
Query: 53 RNVNVKAATYKVI------HCTGHLVQNQT---PASNGS--TLMEPQDNIENQSDNTRRG 101
+K + H H+ Q + PA +G ++ I++ N G
Sbjct: 157 FICRMKVGNMQTTGDMAAAHGLHHVKQRNSLGPPARDGQNYAVVHCTGYIKSWPPN---G 213
Query: 102 SAIQDKDDSEPEEEVGEKRRVVTE--PSHC-FVAIG--EPIPHPANYDVPLSQT---FLT 153
+ D++ + VG V E SHC VAIG + P + D+ S + F++
Sbjct: 214 MGLADREAAG--VPVGPDGVVTDENVSSHCCLVAIGRLQVTSTPNSSDLAGSNSNNEFIS 271
Query: 154 KHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+HS + KFT+ D+ + LG+ P + ++F H +D H++ +F+
Sbjct: 272 RHSAEGKFTFVDQRVGGILGYTPSELLGHPCYEFFHPEDLTHMRESFE 319
>gi|348526890|ref|XP_003450952.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Oreochromis niloticus]
Length = 731
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED------------------------IRAQRS 39
D +G S+Y+ HP D +++ LS + + A+RS
Sbjct: 180 DWLGSSLYDQLHPDDKDKLQEQLSTAENNNTGRMLDLKTGTVKKESQQSSARMSMGARRS 239
Query: 40 VFIRLKCTLTS------------KGRNVNVKAAT------YKVIHCTGHLVQNQTPASNG 81
R++C + + RN N A Y V+HCTG+ +++ PA G
Sbjct: 240 FICRMRCGTSPVEPMSMNRLQFLRNRNRNGLGAAKEGEPQYVVVHCTGY-IKSWPPA--G 296
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
+L ++++DNT+ GS +C VAIG +
Sbjct: 297 VSL------TDDEADNTQ-GS------------------------RYCLVAIGRLQVTCC 325
Query: 140 PANYDV---PLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + DV + F+++H+ FT+ D +G+ P + K++ DF H +D +
Sbjct: 326 PGDTDVNSISVPVEFISRHNCQGMFTFVDHRCLPAIGYQPQDLLGKNILDFAHPEDQGLL 385
Query: 197 QNAFK 201
+++F+
Sbjct: 386 RDSFQ 390
>gi|357628246|gb|EHJ77636.1| putative arylhydrocarbon receptor nuclear translocator-like protein
b [Danaus plexippus]
Length = 641
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 129 CFVAIGE----PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
C VAIG P A F+++HS++ +FT+AD+ LG+ P + K
Sbjct: 296 CLVAIGRLQVTSTPSSAEGSACGGVEFVSRHSVEGRFTFADQRAAQVLGYAPADLLGKLC 355
Query: 185 FDFHHAQDSFHIQNAF 200
+DF+H +D H+++ F
Sbjct: 356 YDFYHPEDQQHMRDNF 371
>gi|8132411|gb|AAF73280.1|AF155066_1 aryl hydrocarbon receptor nuclear translocator 2A [Danio rerio]
Length = 425
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 290 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 321
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 322 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 375
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + + K + +F H +D H++ +F+
Sbjct: 376 QPQVLLGKDILEFCHPEDQSHLRESFQ 402
>gi|380014080|ref|XP_003691071.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Apis florea]
Length = 830
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 94/250 (37%), Gaps = 88/250 (35%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 367 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGARR 426
Query: 39 SVFIRLK----------------------CTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
S F R+K C K +NV+ K Y VI CTG+L ++
Sbjct: 427 SFFCRMKRKVEGIRCGELQVKEESESASGCHRRKKQQNVDWK---YCVIQCTGYL-KSWA 482
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE- 135
PA K D E E G+ C VA+G
Sbjct: 483 PA----------------------------KIDLEEHEGDGDGEACNLS---CLVAVGRL 511
Query: 136 ----PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQ 191
P P + S F+++H++D KF + D+ LGF P + S+++++H
Sbjct: 512 QSTIPTSLPKKPRL-RSIKFVSRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHD 570
Query: 192 DSFHIQNAFK 201
D H+ + K
Sbjct: 571 DIPHLAESHK 580
>gi|158294552|ref|XP_556301.3| AGAP005655-PA [Anopheles gambiae str. PEST]
gi|157015616|gb|EAL39880.3| AGAP005655-PA [Anopheles gambiae str. PEST]
Length = 642
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 83/244 (34%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 161 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVTRLCPGARR 220
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT-------------------------YKVIHCTGHLVQ 73
S F R+KC NV VK Y VI CTG+L +
Sbjct: 221 SFFCRMKCKA-----NVQVKEEADQPNSVSSVNNVCHRRKKQVNSDKKYSVIQCTGYL-K 274
Query: 74 NQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAI 133
+ PA G +E EN++D + D V R C ++
Sbjct: 275 SWAPAKIG---LE-----ENETDG--------EGDSCNLSCLVAVGRVQPNLSQSCSLSN 318
Query: 134 GE-----PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
G+ IP+ N F+++H++D KF + D+ LGF P + S+++++
Sbjct: 319 GKQLNRNTIPNLRNVQ------FISRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYY 372
Query: 189 HAQD 192
H +D
Sbjct: 373 HHED 376
>gi|73948103|ref|XP_541539.2| PREDICTED: neuronal PAS domain-containing protein 1 [Canis lupus
familiaris]
Length = 594
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 39/107 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------------------------TEDIRA 36
+V+L G S+++ HP DHSEV L T +I A
Sbjct: 175 QVELTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVPSSSSSSSSSSLADTPEIEA 234
Query: 37 ------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 235 SAAEAPPFSRVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL 279
>gi|410982742|ref|XP_003997707.1| PREDICTED: neuronal PAS domain-containing protein 1 [Felis catus]
Length = 599
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 39/107 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------------------------TEDIRA 36
+V+L G S+++ HP DHSEV L T +I A
Sbjct: 180 QVELTGSSVFDYIHPGDHSEVLEQLGLRARTPGPPTPPSVPSSSSSSSSSSLADTPEIEA 239
Query: 37 ------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 240 SPAEVPHFSRAQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL 284
>gi|121503164|gb|ABM55130.1| SIM1 [Macaca mulatta]
Length = 65
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 3 VDLMGQSIYEVTHPCDHSEVKSILSANH------TEDIRAQRSVFIRLKCTLTSKGRNVN 56
V+L G SIYE HP DH E+ ++L+A+ ++ +RS F+R+KC L RN
Sbjct: 1 VELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNAG 58
Query: 57 VKAATYK 63
+ YK
Sbjct: 59 LTCGGYK 65
>gi|328776724|ref|XP_001121441.2| PREDICTED: cycle [Apis mellifera]
Length = 925
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 94/250 (37%), Gaps = 88/250 (35%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 462 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGARR 521
Query: 39 SVFIRLK----------------------CTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
S F R+K C K +NV+ K Y VI CTG+L ++
Sbjct: 522 SFFCRMKRKVEGIRCGELQVKEESESASGCHRRKKQQNVDWK---YCVIQCTGYL-KSWA 577
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE- 135
PA K D E E G+ C VA+G
Sbjct: 578 PA----------------------------KIDLEEHEGDGDGEACNLS---CLVAVGRL 606
Query: 136 ----PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQ 191
P P + S F+++H++D KF + D+ LGF P + S+++++H
Sbjct: 607 QSTIPTSLPKKPRL-RSIKFVSRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHD 665
Query: 192 DSFHIQNAFK 201
D H+ + K
Sbjct: 666 DIPHLAESHK 675
>gi|355707720|gb|AES03042.1| neuronal PAS domain protein 1 [Mustela putorius furo]
Length = 440
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 39/107 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------------------------TEDIRA 36
+V+L G S+++ HP DHSEV L T +I A
Sbjct: 34 QVELTGSSVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSLADTPEIEA 93
Query: 37 ------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 94 SATEVPPFSRVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL 138
>gi|345484580|ref|XP_001602684.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Nasonia vitripennis]
Length = 823
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 94/247 (38%), Gaps = 81/247 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-------------------AQR 38
DL+GQS +++ HP D ++VK LS++ D + A+R
Sbjct: 367 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDMPQGVSRLCPGARR 426
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT------------------YKVIHCTGHLVQNQTPASN 80
S F R+K + ++ +K Y VI CTG+L ++ PA
Sbjct: 427 SFFCRMKRKVDARCAESQIKERADTTTGYHMQKKQQNHDWKYCVIQCTGYL-KSWAPAKI 485
Query: 81 GSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE---PI 137
G L E + + ++ N C VA+G P+
Sbjct: 486 G--LEEQESEADGEACNL-----------------------------SCLVAVGRMQPPL 514
Query: 138 PHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSF 194
P + L F+++H++D KF + D+ LGF P S+++++H D
Sbjct: 515 VAPTSTPRRLRLRNIEFVSRHAIDGKFLFVDQRATMVLGFLPQELQGTSMYEYYHHDDIP 574
Query: 195 HIQNAFK 201
H+ + K
Sbjct: 575 HLAKSHK 581
>gi|157126327|ref|XP_001654596.1| circadian protein clock/arnt/bmal/pas [Aedes aegypti]
gi|108882568|gb|EAT46793.1| AAEL002049-PA, partial [Aedes aegypti]
Length = 657
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 69/235 (29%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 143 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVTRLCPGARR 202
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQTP 77
S F R+KC N+ VK Y VI CTG+L ++ P
Sbjct: 203 SFFCRMKCKT-----NIQVKEEAESNGSTSSCHRRKNKVNSDKKYSVIQCTGYL-KSWAP 256
Query: 78 ASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPI 137
A G L E + + E +S N A+ S RRV + I
Sbjct: 257 AKIG--LEEHETDGEGESCNLSCLVAVGRNQISGNGNLT--NRRVTGFNRN-------NI 305
Query: 138 PHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
P+ N F+++H++D KF + D+ LGF P + S+++++H +D
Sbjct: 306 PNLRNVQ------FISRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHED 354
>gi|350406507|ref|XP_003487795.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Bombus impatiens]
Length = 737
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 95/251 (37%), Gaps = 90/251 (35%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 281 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGARR 340
Query: 39 SVFIRLK----------------------CTLTSKGRNVNVKAATYKVIHCTGHLVQNQT 76
S F R+K C K +NV+ K Y VI CTG+L ++
Sbjct: 341 SFFCRMKRKVEGVRCSELQVKEETDTAGGCHRRKKQQNVDWK---YCVIQCTGYL-KSWA 396
Query: 77 PASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE- 135
PA K D E E G+ C VA+G
Sbjct: 397 PA----------------------------KIDLEEHEGDGDGEACNLS---CLVAVGRL 425
Query: 136 ----PIPHPANYDV-PLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHA 190
P P + P+ F+++H++D KF + D+ LGF P + S+++++H
Sbjct: 426 QSTLPTSLPKKPRLRPIK--FVSRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHH 483
Query: 191 QDSFHIQNAFK 201
D H+ + K
Sbjct: 484 DDIPHLAESHK 494
>gi|157126329|ref|XP_001654597.1| circadian protein clock/arnt/bmal/pas [Aedes aegypti]
gi|108882569|gb|EAT46794.1| AAEL002049-PB, partial [Aedes aegypti]
Length = 647
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 69/235 (29%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 143 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVTRLCPGARR 202
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQTP 77
S F R+KC N+ VK Y VI CTG+L ++ P
Sbjct: 203 SFFCRMKCKT-----NIQVKEEAESNGSTSSCHRRKNKVNSDKKYSVIQCTGYL-KSWAP 256
Query: 78 ASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPI 137
A G L E + + E +S N A+ S RRV + I
Sbjct: 257 AKIG--LEEHETDGEGESCNLSCLVAVGRNQISGNGNLT--NRRVTGFNRN-------NI 305
Query: 138 PHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
P+ N F+++H++D KF + D+ LGF P + S+++++H +D
Sbjct: 306 PNLRNVQ------FISRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHED 354
>gi|371534934|gb|AEX32872.1| cycle protein [Aedes aegypti]
Length = 744
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 69/235 (29%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 230 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVTRLCPGARR 289
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQTP 77
S F R+KC N+ VK Y VI CTG+L ++ P
Sbjct: 290 SFFCRMKCKT-----NIQVKEEAESNGSTSSCHRRKNKVNSDKKYSVIQCTGYL-KSWAP 343
Query: 78 ASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPI 137
A G L E + + E +S N A+ S RRV + I
Sbjct: 344 AKIG--LEEHETDGEGESCNLSCLVAVGRNQISGNGNLT--NRRVTGFNRN-------NI 392
Query: 138 PHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
P+ N F+++H++D KF + D+ LGF P + S+++++H +D
Sbjct: 393 PNLRNVQ------FISRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHED 441
>gi|426389352|ref|XP_004061087.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426389354|ref|XP_004061088.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 590
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|405952229|gb|EKC20066.1| Endothelial PAS domain-containing protein 1 [Crassostrea gigas]
Length = 746
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 62/210 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL-----------------SANHTEDIRAQRSVFIRL 44
+V L+G+ + + HP D E+K S H + R ++R+
Sbjct: 33 QVQLLGKKVTTLIHPSDIPELKKQFNLKPCEMHCSCPVNMDNSDKHVPHLDDNRVFYLRM 92
Query: 45 KCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAI 104
KC L G + K + + ++ C+G L T + R S
Sbjct: 93 KCVLKKNG--IRTKQSGFVLMQCSGRLKMRATAS--------------------RANSYS 130
Query: 105 QDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTY 163
D + I P+ + ++ L F+++H L MKFT+
Sbjct: 131 VDG----------------------LICICRPMQTNSVMEIRLDGSMFISRHDLGMKFTF 168
Query: 164 ADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
D + +G++P+ I K+ + FH+ D+
Sbjct: 169 CDPRIATLIGYDPEEVIGKTAYQFHNPLDA 198
>gi|402906063|ref|XP_003915826.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Papio anubis]
gi|402906065|ref|XP_003915827.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Papio anubis]
Length = 590
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLAQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|195354268|ref|XP_002043620.1| GM16138 [Drosophila sechellia]
gi|194127788|gb|EDW49831.1| GM16138 [Drosophila sechellia]
Length = 413
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 93/247 (37%), Gaps = 94/247 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQ 75
+RS F R+K S N +K + Y+VI CTG+L ++
Sbjct: 204 RRSFFCRMKLRTAS---NNQIKEESDTSSSSRSSTKRKSRLSTGHKYRVIQCTGYL-KSW 259
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIG 134
TP I+D+D D + +E+ T C VAIG
Sbjct: 260 TP--------------------------IKDEDQDGDSDEQ--------TTNLSCLVAIG 285
Query: 135 EPIPHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVF 185
P+ N +P S F+++HS + KF + D+ +GF P + S +
Sbjct: 286 RIPPNVRNSTLPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFY 345
Query: 186 DFHHAQD 192
++ H +D
Sbjct: 346 EYFHNED 352
>gi|156392022|ref|XP_001635848.1| predicted protein [Nematostella vectensis]
gi|156222946|gb|EDO43785.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 58/210 (27%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKG---- 52
+V+L G ++Y HP D +++ + L AN++ +S F+R+KCTL +G
Sbjct: 113 QVELTGNNVYHYVHPEDQTDLANQLYEIEILANNSPSPTDTKSFFMRMKCTLVRRGGSYT 172
Query: 53 RNVNVKAATYK----VIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD 108
++ KA K VIHC G L + ++N+S + +
Sbjct: 173 KSSGFKACLAKKTKCVIHCVGRL---------------KKYALDNESTHRK--------- 208
Query: 109 DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADET 167
FV + + + ++PL F+++ ++D+K Y +
Sbjct: 209 --------------------AFVMVCQSVMSMNINELPLECNMFVSRVNMDLKIVYCEGR 248
Query: 168 MEDFLGFNPDIFIAKSVFDFHHAQDSFHIQ 197
+ F+ + + S +DF+HA D IQ
Sbjct: 249 IHKFMDYFAKDIVGISAYDFYHAGDVAVIQ 278
>gi|281354596|gb|EFB30180.1| hypothetical protein PANDA_007721 [Ailuropoda melanoleuca]
Length = 708
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 81/246 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 168 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 227
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 228 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 283
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D EVG+ + +C VAIG +
Sbjct: 284 -------------------GMTIPEED-----AEVGQGSK------YCLVAIGRLQVTSS 313
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D V + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 314 PVCMDMSGVSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 373
Query: 197 QNAFKN 202
+ +F+
Sbjct: 374 RESFQQ 379
>gi|301767426|ref|XP_002919129.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Ailuropoda melanoleuca]
Length = 706
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 81/246 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D EVG+ + +C VAIG +
Sbjct: 282 -------------------GMTIPEED-----AEVGQGSK------YCLVAIGRLQVTSS 311
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D V + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 312 PVCMDMSGVSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 371
Query: 197 QNAFKN 202
+ +F+
Sbjct: 372 RESFQQ 377
>gi|22027482|ref|NP_002508.2| neuronal PAS domain-containing protein 1 [Homo sapiens]
gi|59803108|sp|Q99742.2|NPAS1_HUMAN RecName: Full=Neuronal PAS domain-containing protein 1;
Short=Neuronal PAS1; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP5; AltName:
Full=Class E basic helix-loop-helix protein 11;
Short=bHLHe11; AltName: Full=Member of PAS protein 5;
AltName: Full=PAS domain-containing protein 5
gi|12313662|dbj|BAB21098.1| neuronal PAS domain protein 1 (NPAS1) [Homo sapiens]
gi|24660361|gb|AAH39016.1| NPAS1 protein [Homo sapiens]
gi|119577858|gb|EAW57454.1| neuronal PAS domain protein 1 [Homo sapiens]
Length = 590
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|332257214|ref|XP_003277706.1| PREDICTED: neuronal PAS domain-containing protein 1 [Nomascus
leucogenys]
Length = 587
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVSPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|297705266|ref|XP_002829499.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1
[Pongo abelii]
gi|395751430|ref|XP_003779257.1| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2
[Pongo abelii]
Length = 590
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|332856339|ref|XP_001168597.2| PREDICTED: neuronal PAS domain-containing protein 1 isoform 1 [Pan
troglodytes]
gi|332856341|ref|XP_001168613.2| PREDICTED: neuronal PAS domain-containing protein 1 isoform 2 [Pan
troglodytes]
gi|410215168|gb|JAA04803.1| neuronal PAS domain protein 1 [Pan troglodytes]
gi|410254662|gb|JAA15298.1| neuronal PAS domain protein 1 [Pan troglodytes]
gi|410301982|gb|JAA29591.1| neuronal PAS domain protein 1 [Pan troglodytes]
Length = 590
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|1840056|gb|AAB47248.1| neuronal PAS1 [Homo sapiens]
Length = 590
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTTTPGPPTPSSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|194874376|ref|XP_001973390.1| GG13369 [Drosophila erecta]
gi|190655173|gb|EDV52416.1| GG13369 [Drosophila erecta]
Length = 413
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 93/247 (37%), Gaps = 94/247 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQ 75
+RS F R+K + N +K + Y+VI CTG+L ++
Sbjct: 204 RRSFFCRMKLRTAN---NNQIKEESDTSSSSRSSTKRKSRLSTGHKYRVIQCTGYL-KSW 259
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIG 134
TP I+D+D D + +E+ T C VAIG
Sbjct: 260 TP--------------------------IKDEDQDGDSDEQ--------TTNLSCLVAIG 285
Query: 135 EPIPHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVF 185
P+ N VP S F+++HS + KF + D+ +GF P + S +
Sbjct: 286 RIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFY 345
Query: 186 DFHHAQD 192
++ H +D
Sbjct: 346 EYFHNED 352
>gi|157106764|ref|XP_001649472.1| neuronal pas domain protein [Aedes aegypti]
gi|108868781|gb|EAT33006.1| AAEL014740-PA [Aedes aegypti]
Length = 599
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 72/222 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRA------------------------- 36
+V++ G SI++ H DH+EV+ L D +
Sbjct: 195 QVEMTGSSIFDYIHKGDHAEVEQQLGVKKNSDYYSGYSDEPPEKTVLKIVKDSKPLPGET 254
Query: 37 ----QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIE 92
R+ +R+K TLT +G + K++ Y+VI HL + N ST
Sbjct: 255 YEGDDRAFCVRMKSTLTKRG--CHFKSSGYRVILLLCHLRKK-----NNST--------- 298
Query: 93 NQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTF 151
+E EK+ V+ V IG +P P+ +++ L S F
Sbjct: 299 ---------------------DEHSEKQTVIG-----MVGIGIALPPPSLHEIKLESDMF 332
Query: 152 LTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
+ + SLD+ + + + FL + D KSV+ H QD+
Sbjct: 333 VFRTSLDLTIIHCENRISSFLDYTADELNGKSVYTLCHGQDA 374
>gi|397493270|ref|XP_003817533.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 1 [Pan paniscus]
Length = 590
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-----------------------TEDIRA-- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTPEIEASL 233
Query: 37 ----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|109125286|ref|XP_001112801.1| PREDICTED: neuronal PAS domain-containing protein 1-like isoform 3
[Macaca mulatta]
Length = 591
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 38/106 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH------------------------TEDIRA- 36
+V++ G S+++ HP DHSEV L T +I A
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSSLADTPEIEAS 233
Query: 37 -----------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 LTKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 277
>gi|157128236|ref|XP_001661358.1| neuronal pas domain protein [Aedes aegypti]
gi|108882245|gb|EAT46470.1| AAEL002343-PA [Aedes aegypti]
Length = 599
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 72/222 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRA------------------------- 36
+V++ G SI++ H DH+EV+ L D +
Sbjct: 195 QVEMTGSSIFDYIHKGDHAEVEQQLGVKKNSDYYSGYSDEPPEKTVLKIVKDSKPLPGET 254
Query: 37 ----QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIE 92
R+ +R+K TLT +G + K++ Y+VI HL + N ST
Sbjct: 255 YEGDDRAFCVRMKSTLTKRG--CHFKSSGYRVILLLCHLRKK-----NNST--------- 298
Query: 93 NQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTF 151
+E EK+ V+ V IG +P P+ +++ L S F
Sbjct: 299 ---------------------DEHSEKQTVIG-----MVGIGIALPPPSLHEIKLESDMF 332
Query: 152 LTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
+ + SLD+ + + + FL + D KSV+ H QD+
Sbjct: 333 VFRTSLDLTIIHCENRISSFLDYTADELNGKSVYTLCHGQDA 374
>gi|444730780|gb|ELW71154.1| Neuronal PAS domain-containing protein 1 [Tupaia chinensis]
Length = 646
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 82/234 (35%), Gaps = 90/234 (38%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSIL----------------------------------S 27
+V+L G S+++ HP DHSEV L S
Sbjct: 227 QVELTGSSVFDYIHPGDHSEVLEQLGLRARTHGPPTPPSVSSSSSSSSSSLADTPEAEAS 286
Query: 28 ANHTEDIRAQ-RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLME 86
R Q RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 287 PTAAPPSRVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL--------------- 329
Query: 87 PQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVP 146
R A+ VA+G +P ++P
Sbjct: 330 -------------RARALG------------------------LVALGHTLPPAPLAELP 352
Query: 147 L-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
L + + SL + + + + + P + +S + F HAQD+ I+ +
Sbjct: 353 LHGHMIVFRLSLGLTILACESRVSEHMDLGPSELVGRSCYQFVHAQDATSIRQS 406
>gi|203285600|gb|ACH97388.1| tango [Ceratitis colae]
Length = 113
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 34/136 (25%)
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGE 118
Y V+HCTG+ ++N P T M P ++E D+ S
Sbjct: 8 GTNYAVVHCTGY-IKNWPP-----TDMFPGVHMERPGDDDMHASHC-------------- 47
Query: 119 KRRVVTEPSHCFVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGF 174
C VAIG + A+ D+ S F+T+H++D KFT+ D+ + + LG+
Sbjct: 48 ----------CLVAIGRLQVTSTASNDMTNSNNQSEFITRHAMDGKFTFVDQRVMNVLGY 97
Query: 175 NPDIFIAKSVFDFHHA 190
+P + K +DF HA
Sbjct: 98 SPTDLLGKICYDFCHA 113
>gi|87204427|gb|ABD32161.1| aryl hydrocarbon receptor nuclear translocator 2 [Micropogonias
undulatus]
Length = 530
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 95/247 (38%), Gaps = 81/247 (32%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQ 37
+ + G ++YE HP D +++ LS + D++ ++
Sbjct: 174 QAEWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSR 233
Query: 38 RSVFIRLKCTLT-----SKGRNVNVKA-------------ATYKVIHCTGHLVQNQTPAS 79
RS R++C S R N++ A Y V+HCTG+ ++ PA
Sbjct: 234 RSFICRMRCGSAPLDHISLNRLSNMRKRYRNGLGPSKEGEAQYSVVHCTGY-IKAWPPA- 291
Query: 80 NGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPI 137
G I D+D E G+ + +C VAIG +
Sbjct: 292 ---------------------GMTIPDED-----TEAGQTGK------YCLVAIGRLQVT 319
Query: 138 PHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSF 194
P + D + + FL++H+ D T+ D + +G+ P + K + +F H +D
Sbjct: 320 SSPVSMDMNGLSVPTEFLSRHNSDGVITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQS 379
Query: 195 HIQNAFK 201
H++ +F+
Sbjct: 380 HLRESFQ 386
>gi|284813602|ref|NP_001165410.1| aryl hydrocarbon receptor nuclear translocator 2b [Xenopus laevis]
gi|37499104|gb|AAQ91608.1| aryl-hydrocarbon receptor nuclear translocator 2 [Xenopus laevis]
Length = 715
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE THP D +++ L + D++ ++RS
Sbjct: 176 EWFGSTLYEHTHPDDIEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
RL+C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 236 FICRLRCGNAPLDHLPLNRISTMRKRYRNGLGPVKEGEAQYSVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 292 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 321
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + L FL++H+ + T+ D +G+ P + K + +F H +D H+
Sbjct: 322 PGCLDMNGMSLPTEFLSRHNTEGVITFVDPRCISIIGYQPQDLLGKDIIEFCHPEDQSHL 381
Query: 197 QNAFK 201
+ +F+
Sbjct: 382 RESFQ 386
>gi|379135494|gb|AFC93435.1| brain and muscle Arnt-like protein 2 variant d [Rattus norvegicus]
Length = 579
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 69/236 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN------------------HTEDIRAQ------ 37
+ LMGQ++++ HP D ++VK LS + H+ R++
Sbjct: 160 QASLMGQNLFDFLHPKDVAKVKEQLSCDVSLREKPIGTKTSPQVHSHSHIGRSRVHSGSR 219
Query: 38 RSVFIRLK--CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
RS F R+K CT+ K + K IHCTG+L ++ P G+
Sbjct: 220 RSFFFRMKSSCTVPVKEEQRCSSCSKKKDQRKFHTIHCTGYL-RSWPPNVVGT------- 271
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH---PANYDVP 146
E+E+G + + P C VA+G P+ P N +
Sbjct: 272 -----------------------EKEMGSGKD--SGPLTCLVAMGRLQPYTVPPKNGKIN 306
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ + K
Sbjct: 307 VRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHK 362
>gi|15147215|gb|AAK12620.1| brain-muscle-ARNT-like protein 2b [Rattus norvegicus]
Length = 531
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 69/236 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN------------------HTEDIRAQ------ 37
+ LMGQ++++ HP D ++VK LS + H+ R++
Sbjct: 119 QASLMGQNLFDFLHPKDVAKVKEQLSCDVSLREKPIGTKTSPQVHSHSHIGRSRVHSGSR 178
Query: 38 RSVFIRLK--CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
RS F R+K CT+ K + K IHCTG+L ++ P G+
Sbjct: 179 RSFFFRMKSSCTVPVKEEQRCSSCSKKKDQRKFHTIHCTGYL-RSWPPNVVGT------- 230
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH---PANYDVP 146
E+E+G + + P C VA+G P+ P N +
Sbjct: 231 -----------------------EKEMGSGKD--SGPLTCLVAMGRLQPYTVPPKNGKIN 265
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ + K
Sbjct: 266 VRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHK 321
>gi|15277629|gb|AAK93959.1| brain-muscle-ARNT-like protein 2a [Rattus norvegicus]
Length = 565
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 69/236 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN------------------HTEDIRAQ------ 37
+ LMGQ++++ HP D ++VK LS + H+ R++
Sbjct: 153 QASLMGQNLFDFLHPKDVAKVKEQLSCDVSLREKPIGTKTSPQVHSHSHIGRSRVHSGSR 212
Query: 38 RSVFIRLK--CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
RS F R+K CT+ K + K IHCTG+L ++ P G+
Sbjct: 213 RSFFFRMKSSCTVPVKEEQRCSSCSKKKDQRKFHTIHCTGYL-RSWPPNVVGT------- 264
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH---PANYDVP 146
E+E+G + + P C VA+G P+ P N +
Sbjct: 265 -----------------------EKEMGSGKD--SGPLTCLVAMGRLQPYTVPPKNGKIN 299
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ + K
Sbjct: 300 VRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHK 355
>gi|410960433|ref|XP_003986794.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Felis
catus]
Length = 706
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 81/246 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKDGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D V + FL++HS D T+ D +G+ P + K + +F H++D H+
Sbjct: 312 PVCMDMSGVSVPTEFLSRHSSDGVITFVDPRCISVVGYQPQDLLGKDILEFCHSEDQSHL 371
Query: 197 QNAFKN 202
+ +F+
Sbjct: 372 RESFQQ 377
>gi|393908533|gb|EJD75096.1| CBR-HIF-1 protein [Loa loa]
Length = 762
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 43/191 (22%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
+ DL G+S+ E H D+ E S + + T D R +R+K ++ +GRN+N+K A
Sbjct: 117 QTDLTGRSLKEFIHTSDYEEYVSCDTGSAT-DRGCGRVYTLRMKSVISPRGRNLNLKNAV 175
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
+K I C +I + S R IQ + G+
Sbjct: 176 FKPIIC----------------------HIRSLSAENGRVRIIQAS-----AQPAGQGNG 208
Query: 122 VVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIA 181
V + V G T+LT+H+ DMKF+Y E+ L +
Sbjct: 209 VFAASRNAEVQNG---------------TYLTRHTYDMKFSYVSESFNYILRHESRSLMG 253
Query: 182 KSVFDFHHAQD 192
S ++ H D
Sbjct: 254 TSFYNLIHPAD 264
>gi|345791952|ref|XP_543750.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Canis lupus familiaris]
Length = 1066
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 69/236 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-------------------A 36
+ L G+S+++ HP D ++VK LS++ D + +
Sbjct: 650 QASLTGRSLFDFLHPKDVAKVKEQLSSSDISPREKLIDAKTGLQVHGNFHSGRTHVYSGS 709
Query: 37 QRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + + + K IHCTG+L ++ N L E +D
Sbjct: 710 RRSFFCRMKSCKISVKEEHECLSTSKKKDHRKFCTIHCTGYL---RSWPPNIVGLEEERD 766
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N +N S+ T C VAIG P+ P N ++
Sbjct: 767 NKKNSSNFT------------------------------CLVAIGRLHPYIVPQNSGEIK 796
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ + K
Sbjct: 797 VKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHK 852
>gi|344273381|ref|XP_003408500.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 3-like [Loxodonta africana]
Length = 915
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 90/232 (38%), Gaps = 83/232 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------KSILSANHTEDIRA-------------- 36
+V+L G S+++ HP DH E+ + +LS ED +
Sbjct: 174 QVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPV 233
Query: 37 --------------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGS 82
+RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G
Sbjct: 234 ESTSPSLLTTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGR 290
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
T+ P + +G V + +P P
Sbjct: 291 TV---------------------------PSQIMG------------LVVVAHXLPPPTI 311
Query: 143 YDVPLS-QTFLTKHSLDMKFTY-ADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+V + F+T+ ++ + +Y + D++ P + K + F HA+D
Sbjct: 312 NEVRIDCHMFVTRVNMKPQISYTVKNRISDYMDLTPVDIVGKRCYHFIHAED 363
>gi|403299442|ref|XP_003940495.1| PREDICTED: neuronal PAS domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 522
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 38/106 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV------------------------------------KSI 25
+V++ G S+++ HP DHSEV ++
Sbjct: 105 QVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSSLADTPESEAS 164
Query: 26 LSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
L+ + +RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 165 LTKEPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 208
>gi|195496129|ref|XP_002095562.1| GE22462 [Drosophila yakuba]
gi|194181663|gb|EDW95274.1| GE22462 [Drosophila yakuba]
Length = 413
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 90/246 (36%), Gaps = 92/246 (37%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT---------------------YKVIHCTGHLVQNQ 75
+RS F R+K + N +K + Y+VI CTG+L ++
Sbjct: 204 RRSFFCRMKLRTAN---NNQIKEESDTSSSSRSSTKRKSRLGTGHKYRVIQCTGYL-KSW 259
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE 135
TP + E QD D D V T C VAIG
Sbjct: 260 TPIKD-----EDQDG---------------DSD-------------VQTTNLSCLVAIGR 286
Query: 136 PIPHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFD 186
P+ N VP S F+++HS + KF + D+ +GF P + S ++
Sbjct: 287 IPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYE 346
Query: 187 FHHAQD 192
+ H +D
Sbjct: 347 YFHNED 352
>gi|328777731|ref|XP_394708.4| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Apis mellifera]
Length = 685
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 67/248 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED-----------IRAQRSVFIRLKCTLTSKG 52
D G S+Y HP D +VK LS E+ ++ + +RL C + +G
Sbjct: 170 DWYGTSLYSQVHPDDTEKVKEQLSGAEPENGGRVLDLKTGTVKKEGQSSMRL-CMGSRRG 228
Query: 53 RNVNVKAAT-------------------------------YKVIHCTGHLVQNQTPASNG 81
+K Y V+HCTG+ +++ P +
Sbjct: 229 FICRMKVGNMQTTGDMAAAHGLHHVKQRNSLGPPARDGQNYAVVHCTGY-IKSWPPNGDF 287
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTE--PSHC-FVAIG--EP 136
P G + D++ + VG V E SHC VAIG +
Sbjct: 288 VPPCVP-------------GMGLADREAAG--VPVGPDGVVTDENVSSHCCLVAIGRLQV 332
Query: 137 IPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
P + D+ S + F+++HS + KFT+ D+ + LG+ P + ++F H +D
Sbjct: 333 TSTPNSSDLAGSNSNNEFISRHSAEGKFTFVDQRVGGILGYTPSELLGHPCYEFFHPEDL 392
Query: 194 FHIQNAFK 201
H++ +F+
Sbjct: 393 THMRESFE 400
>gi|340717548|ref|XP_003397243.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Bombus terrestris]
Length = 663
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 69/248 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED-----------IRAQRSVFIRLKCTLTSKG 52
D G S+Y HP D +VK LS E+ ++ + +RL C + +G
Sbjct: 150 DWYGTSLYSQVHPDDTEKVKEQLSGAEPENGGRVLDLKTGTVKKEGQSSMRL-CMGSRRG 208
Query: 53 RNVNVKAAT-------------------------------YKVIHCTGHLVQNQTPASNG 81
+K Y V+HCTG+ +++ P +
Sbjct: 209 FICRMKVGNMQTTGDMAAAHGLHHVKQRNSLGPPARDGQNYAVVHCTGY-IKSWPPNGDF 267
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTE--PSHC-FVAIG--EP 136
P G + D++ +VG V E +HC VAIG +
Sbjct: 268 VPPCVP-------------GMGLADRE----AVQVGHDGVVADENVSTHCCLVAIGRLQV 310
Query: 137 IPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
P + D+ S + F+++HS + KFT+ D+ + LG+ P + ++F H +D
Sbjct: 311 TSTPNSSDLAGSNSNNEFISRHSAEGKFTFVDQRVGGILGYTPSELLGHPCYEFFHPEDL 370
Query: 194 FHIQNAFK 201
H++ +F+
Sbjct: 371 THMRESFE 378
>gi|350407684|ref|XP_003488160.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Bombus impatiens]
Length = 663
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 69/248 (27%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTED-----------IRAQRSVFIRLKCTLTSKG 52
D G S+Y HP D +VK LS E+ ++ + +RL C + +G
Sbjct: 150 DWYGTSLYSQVHPDDTEKVKEQLSGAEPENGGRVLDLKTGTVKKEGQSSMRL-CMGSRRG 208
Query: 53 RNVNVKAAT-------------------------------YKVIHCTGHLVQNQTPASNG 81
+K Y V+HCTG+ +++ P +
Sbjct: 209 FICRMKVGNMQTTGDMAAAHGLHHVKQRNSLGPPARDGQNYAVVHCTGY-IKSWPPNGDF 267
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTE--PSHC-FVAIG--EP 136
P G + D++ +VG V E +HC VAIG +
Sbjct: 268 VPPCVP-------------GMGLADRE----AVQVGHDGVVADENVSTHCCLVAIGRLQV 310
Query: 137 IPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
P + D+ S + F+++HS + KFT+ D+ + LG+ P + ++F H +D
Sbjct: 311 TSTPNSSDLAGSNSNNEFISRHSAEGKFTFVDQRVGGILGYTPSELLGHPCYEFFHPEDL 370
Query: 194 FHIQNAFK 201
H++ +F+
Sbjct: 371 THMRESFE 378
>gi|355761851|gb|EHH61859.1| hypothetical protein EGM_19993, partial [Macaca fascicularis]
Length = 534
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 37/105 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVK-------------------------------SILSANH 30
+V++ G S+++ HP DHSEV S+ A+
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLXXXXXXXXXXGGLCVSSSGPHNLPSLSVPEASL 233
Query: 31 TE----DIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
T+ + +RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 TKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
>gi|170058673|ref|XP_001865023.1| circadian protein clock/arnt/bmal/pas [Culex quinquefasciatus]
gi|167877699|gb|EDS41082.1| circadian protein clock/arnt/bmal/pas [Culex quinquefasciatus]
Length = 784
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 73/250 (29%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE----------------DI---------RAQR 38
DL+GQS +++ HP D ++VK LS++ D+ A+R
Sbjct: 298 DLLGQSWFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTMLPVKTDVPQGVTRLCPGARR 357
Query: 39 SVFIRLKCT----LTSKGRNVNVKAAT-------------YKVIHCTGHLVQNQTPASNG 81
S F R+KC + + + N +++ Y VI CTG+L ++ PA G
Sbjct: 358 SFFCRMKCKTNVQVKEEAESGNTSSSSCHRRKGKVNSDKKYSVIQCTGYL-KSWAPAKIG 416
Query: 82 STLMEPQDNIENQSDNTR-------------------RGSAIQDKDDSEPEEEVGEKRRV 122
L E + + E S N G+ + ++ + G R
Sbjct: 417 --LEEHETDGEGDSCNLSCLVAVGRVQPSLFQPPIAPSGTNLSNQRPTMEGAGAGTDR-- 472
Query: 123 VTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+ + C IP+ N F+++H++D KF + D+ LGF P +
Sbjct: 473 -SGTNGCKGTSRNNIPNLRNVQ------FISRHAMDGKFLFVDQRATLVLGFLPQELLGT 525
Query: 183 SVFDFHHAQD 192
S+++++H +D
Sbjct: 526 SMYEYYHHED 535
>gi|58372114|ref|NP_571749.1| aryl hydrocarbon receptor nuclear translocator 2 [Danio rerio]
gi|10998384|gb|AAG25920.1|AF219988_1 aryl hydrocarbon receptor nuclear translocator type 2b [Danio
rerio]
Length = 737
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 290 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 321
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 322 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCTNVIGY 375
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + K + +F H +D H++ +F+
Sbjct: 376 QPQDLLGKDILEFCHPEDQSHLRESFQ 402
>gi|156373864|ref|XP_001629530.1| predicted protein [Nematostella vectensis]
gi|156216532|gb|EDO37467.1| predicted protein [Nematostella vectensis]
Length = 372
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 130 FVAIGE----PIPHPANY-DVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
V IG +PH + + P F+++HSLD KFT+ D+ + + LG+ P + +
Sbjct: 243 LVTIGRLQPASVPHSNDLAETPTVTEFISRHSLDGKFTFVDQRVTEVLGYQPRDMLGQLC 302
Query: 185 FDFHHAQDSFHIQNAF 200
+DF H D H+ ++
Sbjct: 303 YDFFHPDDLEHMMESY 318
>gi|260818607|ref|XP_002604474.1| hypothetical protein BRAFLDRAFT_220367 [Branchiostoma floridae]
gi|229289801|gb|EEN60485.1| hypothetical protein BRAFLDRAFT_220367 [Branchiostoma floridae]
Length = 126
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 45/156 (28%)
Query: 53 RNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEP 112
R V+VK++ YKVIH TG L P+ ++ + N P
Sbjct: 2 RGVHVKSSGYKVIHVTGRL--------------RPRLSLSHSQRN--------------P 33
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDF 171
+G VA+ +P P ++ + Q F+++ ++D+K Y + + D+
Sbjct: 34 ITILG------------LVAVAHALPPPTINEIRMEQNMFVSRVTMDLKIIYCEPRITDY 81
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPCYSC 207
+ P ++KS +DF HA+D F+ Y C
Sbjct: 82 MDLAPSDVVSKSCYDFLHAEDV----EPFRRTHYDC 113
>gi|432957104|ref|XP_004085788.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like,
partial [Oryzias latipes]
Length = 460
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ LS + D++ ++RS
Sbjct: 165 EWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 224
Query: 40 VFIRLKCTLT-----SKGRNVNVKA-------------ATYKVIHCTGHLVQNQTPASNG 81
R++C S R N++ A Y V+HCTG+ ++ PA
Sbjct: 225 FICRMRCGSAPLDHISLNRLSNMRKRYRNGLGPSKEGEAQYSVVHCTGY-IKAWPPA--- 280
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D E G+ + +C VAIG +
Sbjct: 281 -------------------GMTIPEED-----TEAGQTGK------YCLVAIGRLQVTSS 310
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + D + + FL++H+ D T+ D + +G+ P + K + +F H +D H+
Sbjct: 311 PVSMDMNGLSVPTEFLSRHNFDGVITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQSHL 370
Query: 197 QNAFK 201
+ +F+
Sbjct: 371 RESFQ 375
>gi|10998382|gb|AAG25919.1| aryl hydrocarbon receptor nuclear translocator type 2a [Danio
rerio]
Length = 425
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 290 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 321
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 322 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 375
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + K + +F H +D H++ +F+
Sbjct: 376 QPQDLLGKDILEFCHPEDQSHLRESFQ 402
>gi|210136300|gb|ACJ08742.1| cycle [Neobellieria bullata]
Length = 410
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 86/244 (35%), Gaps = 88/244 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D ++VK LS+ D + A
Sbjct: 141 QTDLLGQSWFDVLHPKDVAKVKEQLSSLDPCPKERLIDAKTMLPVKTDIPQSLCRLCPGA 200
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT------------------YKVIHCTGHLVQNQTPA 78
+RS F R+K S + + Y+VI CTG+L ++ TP
Sbjct: 201 KRSFFCRMKLKAASSNQIKEESDTSSSSRSSTKRKSKLSMDEKYRVIQCTGYL-KSWTPI 259
Query: 79 SNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIP 138
+ + D I N S C VAIG IP
Sbjct: 260 KEENQDADSDDQITNLS---------------------------------CLVAIGR-IP 285
Query: 139 HPANYDVPLSQ----------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
D S FL++HS+D KF + D+ +GF P + S +++
Sbjct: 286 SNVMEDRTSSSLDNHPNVRHVNFLSRHSVDGKFLFIDQRATLAVGFLPQEILGSSFYEYF 345
Query: 189 HAQD 192
H +D
Sbjct: 346 HPED 349
>gi|10998386|gb|AAG25921.1|AF219989_1 aryl hydrocarbon receptor nuclear translocator type 2c [Danio
rerio]
Length = 722
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 275 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 306
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 307 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 360
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + K + +F H +D H++ +F+
Sbjct: 361 QPQDLLGKDILEFCHPEDQSHLRESFQ 387
>gi|262477850|gb|ACY68223.1| tango [Mayetiola destructor]
Length = 304
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 129 CFVAIGE-PIPHPANY-DVPLSQ--TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
C VAIG + AN D+ + F+++H++D KFT+ D+ +++ L + P + KS
Sbjct: 187 CLVAIGRLQVSSTANASDISANNPIEFISRHAIDGKFTFVDQRVKNVLDYMPTDLLGKSC 246
Query: 185 FDFHHAQDSFHIQNAF 200
+DF H D H++ +F
Sbjct: 247 YDFFHPDDQSHMKESF 262
>gi|170040698|ref|XP_001848127.1| trachealess [Culex quinquefasciatus]
gi|167864310|gb|EDS27693.1| trachealess [Culex quinquefasciatus]
Length = 654
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 67/232 (28%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-----------------------KSILSANHTEDIRA-- 36
+V++ G SI++ H DH+E+ K++L ++D +
Sbjct: 242 QVEMTGSSIFDYVHKQDHAELEHQLGVKKNSEYSGYVYADDPPEKTVLKIASSKDPKPTQ 301
Query: 37 --------QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQ 88
R+ IR+K TLT +G + K++ Y+VI HL
Sbjct: 302 FAESYEGDDRAFCIRMKSTLTKRG--CHFKSSGYRVILLLCHL----------------- 342
Query: 89 DNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL- 147
R+ +A D D R+ V V IG +P P+ +++ L
Sbjct: 343 ----------RKRNAHSDVDHVSTSSSSSSDRQTVIG----MVGIGIALPPPSLHEIKLE 388
Query: 148 SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNA 199
S F+ + SLD+ + + + FL + D KS++ H QD+ ++ +
Sbjct: 389 SDMFVFRTSLDLTIIHCENRIASFLDYTADELNGKSIYSLCHGQDAHKLRKS 440
>gi|355669555|gb|AER94566.1| aryl hydrocarbon receptor nuclear translocator-like 2 [Mustela
putorius furo]
Length = 576
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------------HTEDIR----A 36
+ L GQS+++ HP D ++VK LS++ H+ + +
Sbjct: 195 QASLTGQSLFDFLHPKDVAKVKEQLSSSDLSPREKLIDAKTGLQVHSNFHSGRMHVYSGS 254
Query: 37 QRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + + + K IHCTG+L ++ P G
Sbjct: 255 RRSFFCRIKSCKISVKEEHECLSTSKKKDHRKFCTIHCTGYL-RSWPPNIVG-------- 305
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
+E + D + GS C VAIG P+ P N ++
Sbjct: 306 -VEEERDKKKDGSNFT-----------------------CLVAIGRLHPYIVPQNSGEIK 341
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 342 VKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 388
>gi|327282439|ref|XP_003225950.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Anolis carolinensis]
Length = 719
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 80/246 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 176 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 236 FICRMRCGNAPLDHLPLNRLTTMRKRYRNGLGPVKEGEAQYAVVHCTGY-IKAWPPAG-- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
+ G I ++D EVG+ + +C VAIG
Sbjct: 293 -----------------KIGMTIPEED-----AEVGQGSK------YCLVAIGRLQVTSS 324
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 325 PVCMDMN-GMSAPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQNH 383
Query: 196 IQNAFK 201
++ +F+
Sbjct: 384 LRESFQ 389
>gi|50235050|gb|AAT70731.1| aryl hydrocarbon receptor nuclear translocator 2c [Ctenopharyngodon
idella]
Length = 722
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 274 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 305
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 306 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 359
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + K + +F H +D H++ +F+
Sbjct: 360 QPQDLLGKDILEFCHPEDQSHLRESFQ 386
>gi|50235048|gb|AAT70730.1| aryl hydrocarbon receptor nuclear translocator 2b [Ctenopharyngodon
idella]
Length = 737
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 289 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 320
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 321 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 374
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + K + +F H +D H++ +F+
Sbjct: 375 QPQDLLGKDILEFCHPEDQSHLRESFQ 401
>gi|194751957|ref|XP_001958290.1| GF10846 [Drosophila ananassae]
gi|190625572|gb|EDV41096.1| GF10846 [Drosophila ananassae]
Length = 412
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 87/243 (35%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ +L+GQS ++V HP D +VK LS+ D + A
Sbjct: 144 QAELLGQSWFDVLHPKDIGKVKEQLSSLDQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 203
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT-----------------YKVIHCTGHLVQNQTPAS 79
+RS F R+K T+ ++ Y+VI CTG+L ++ TP
Sbjct: 204 RRSFFCRMKLRATNNQIKEESDTSSSSRSSTKRKSKLSTGHKYRVIQCTGYL-KSWTP-- 260
Query: 80 NGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIGEPIP 138
I+D+D D + +E+ T C VAIG P
Sbjct: 261 ------------------------IKDEDQDGDSDEQ--------TTNLSCLVAIGRIPP 288
Query: 139 HPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
+ N VP S F+++HS + KF + D+ +GF P + S +++ H
Sbjct: 289 NVHNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFH 348
Query: 190 AQD 192
+D
Sbjct: 349 NED 351
>gi|108935955|sp|Q9DG12.2|ARNT2_DANRE RecName: Full=Aryl hydrocarbon receptor nuclear translocator 2;
Short=ARNT protein 2; Short=zfARNT2
Length = 737
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 290 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 321
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 322 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 375
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + K + +F H +D H++ +F+
Sbjct: 376 QPQDLLGKDILEFCHPEDQSHLRESFQ 402
>gi|13569831|gb|AAG16635.1| bHLH-PAS factor ARNT2B [Danio rerio]
Length = 392
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 39/147 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I D+D E G+
Sbjct: 257 AQYSVVHCTGY-IKAWPPA----------------------GMTIPDED-----TEAGQT 288
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P + D + + FL++H+ D T+ D + +G+
Sbjct: 289 SK------YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 342
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFK 201
P + K + +F H +D H++ +F+
Sbjct: 343 QPQDLLGKDILEFCHPEDQSHLRESFQ 369
>gi|269847456|ref|NP_001158488.1| aryl hydrocarbon receptor nuclear translocator-like [Saccoglossus
kowalevskii]
gi|197734681|gb|ACH73236.1| aryl hydrocarbon receptor nuclear translocator-like protein
[Saccoglossus kowalevskii]
Length = 652
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 89/237 (37%), Gaps = 80/237 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSAN--------------------------HTEDIRAQ 37
+L G S++++ HP D ++VK LS++ A+
Sbjct: 171 ELFGLSMFDLLHPKDITKVKEQLSSSDLPPRERLMDAKTGLPMSSDSLPNPSSQSSTGAR 230
Query: 38 RSVFIRLKC---------TLTS-------KGRNVNVKAATYKVIHCTGHLVQNQTPASNG 81
RS F R+K TL + K + + + Y IHCTG+L P+S
Sbjct: 231 RSFFCRMKADSKYSIKKETLQADQSCSRMKQKWSDGERKNYVTIHCTGYL--KSWPSSK- 287
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
I DD PE+ GE + C VAI
Sbjct: 288 ----------------------IPLHDD--PEDTFGEDCIL-----SCLVAIARVQPSQI 318
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
P +N + F+++H++D +FT+ D+ LGF P + S ++++HA D
Sbjct: 319 PQSTGSNSAEIVPTEFVSRHAMDGRFTFVDQRATAILGFLPQELLGTSCYEYYHADD 375
>gi|19716305|gb|AAL95710.1|AF402781_1 aryl hydrocarbon receptor nuclear translocator 2 [Fundulus
heteroclitus]
Length = 731
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ +G ++YE HP D +++ LS + D++ ++RS
Sbjct: 192 EWLGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 251
Query: 40 VFIRLKCTLT-----SKGRNVNVKA-------------ATYKVIHCTGHLVQNQTPASNG 81
R++C S R N++ A Y V+HCTG+ ++ PA
Sbjct: 252 FICRMRCGSAPLDHISLNRLSNMRKRYRNGLGPSKEGEAQYSVVHCTGY-IKAWPPA--- 307
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D E G+ + +C VAIG +
Sbjct: 308 -------------------GMTIPEED-----TEAGQTGK------YCLVAIGRLQVTSS 337
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + D + + FL++H+ D T+ D + +G+ P + K + +F H +D H+
Sbjct: 338 PVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQNHL 397
Query: 197 QNAFK 201
+ +F+
Sbjct: 398 RESFQ 402
>gi|4191335|gb|AAD09750.1| aryl hydrocarbon receptor nuclear translocator 2 [Fundulus
heteroclitus]
Length = 715
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 95/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ +G ++YE HP D +++ LS + D++ ++RS
Sbjct: 176 EWLGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKCTLT-----SKGRNVNVKA-------------ATYKVIHCTGHLVQNQTPASNG 81
R++C S R N++ A Y V+HCTG+ ++ PA
Sbjct: 236 FICRMRCGSAPLDHISLNRLSNMRKRYRNGLGPSKEGEAQYSVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D E G+ + +C VAIG +
Sbjct: 292 -------------------GMTIPEED-----TEAGQTGK------YCLVAIGRLQVTSS 321
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + D + + FL++H+ D T+ D + +G+ P + K + +F H +D H+
Sbjct: 322 PVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQNHL 381
Query: 197 QNAFK 201
+ +F+
Sbjct: 382 RESFQ 386
>gi|296234201|ref|XP_002807896.1| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 1-like [Callithrix jacchus]
Length = 592
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 39/107 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV-------------------------------------KS 24
+V++ G S+++ HP DHSEV ++
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVSSSSSSSSSSSLADTPEIET 233
Query: 25 ILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
L+ + +RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 234 SLTKVPPSSLVRERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 278
>gi|402875068|ref|XP_003901340.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Papio anubis]
Length = 587
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 93/247 (37%), Gaps = 83/247 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFKN 202
++ +F+
Sbjct: 371 LRESFQQ 377
>gi|444730312|gb|ELW70699.1| Aryl hydrocarbon receptor nuclear translocator 2 [Tupaia chinensis]
Length = 783
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 69/229 (30%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 212 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 271
Query: 40 VFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTR 99
R++ L V A Y V+HCTG+ ++ PA
Sbjct: 272 FICRMRNGLGP----VKDGEAQYAVVHCTGY-IKAWPPA--------------------- 305
Query: 100 RGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------PIPHPANYDVPLSQTFLT 153
G I ++D EVG+ + +C VAIG P+ N + + FL+
Sbjct: 306 -GMTIPEED-----AEVGQGSK------YCLVAIGRLQVTSSPVCMDMN-GMSVPTEFLS 352
Query: 154 KHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+H+ D T+ D +G+ P + K + +F H +D H++ +F+
Sbjct: 353 RHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQ 401
>gi|196001273|ref|XP_002110504.1| hypothetical protein TRIADDRAFT_14211 [Trichoplax adhaerens]
gi|190586455|gb|EDV26508.1| hypothetical protein TRIADDRAFT_14211, partial [Trichoplax
adhaerens]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 87/227 (38%), Gaps = 60/227 (26%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE---------------DIRAQRSVFIRLKCTL 48
D G+S+YE+ HP D S+++ LS N D A++S R++
Sbjct: 130 DWTGRSLYELAHPEDTSKIREQLSDNEVSQLTNGIFYLIILNRSDSGARKSFICRMRYGS 189
Query: 49 TS----------KGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNT 98
+ N N YKV+HC G+ +++ P S+N
Sbjct: 190 DNYDVEYEEDQFSSTNPNGVTTRYKVVHCAGY-IRSWPPTGITDDDSSESSFSSFGSENG 248
Query: 99 RRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPI----PHPANYDVPLSQTFLTK 154
+G C VAIG+ + P A+ + TF+++
Sbjct: 249 -----------------IGT----------CLVAIGKLLLATAPTVADEE---GTTFVSR 278
Query: 155 HSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
H ++ FT+ D+ + GF P + K++ ++ H D ++ +FK
Sbjct: 279 HDINGTFTFIDQRITSVTGFLPKDLLGKNIVNYCHPSDRELLEESFK 325
>gi|348525940|ref|XP_003450479.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 2 [Oreochromis niloticus]
Length = 715
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ LS + D++ ++RS
Sbjct: 176 EWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKCTLT-----SKGRNVNVKA-------------ATYKVIHCTGHLVQNQTPASNG 81
R++C S R N++ A Y V+HCTG+ ++ PA
Sbjct: 236 FICRMRCGSAPLDHISLNRLANMRKRYRNGLGPSKEGEAQYSVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D E G+ + +C VAIG +
Sbjct: 292 -------------------GMTIPEEDT-----EAGQTGK------YCLVAIGRLQVTSS 321
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + D + + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 322 PVSMDMNGLSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 381
Query: 197 QNAFK 201
+ +F+
Sbjct: 382 RESFQ 386
>gi|73951283|ref|XP_850172.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Canis lupus familiaris]
Length = 706
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 81/246 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 312 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 371
Query: 197 QNAFKN 202
+ +F+
Sbjct: 372 RESFQQ 377
>gi|335292275|ref|XP_001926107.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Sus scrofa]
Length = 717
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 323 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 382
Query: 197 QNAFK 201
+ +F+
Sbjct: 383 RESFQ 387
>gi|195427561|ref|XP_002061845.1| GK17217 [Drosophila willistoni]
gi|194157930|gb|EDW72831.1| GK17217 [Drosophila willistoni]
Length = 410
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 90/242 (37%), Gaps = 89/242 (36%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------AQR 38
DL+ QS ++V HP D +VK LS+ D + A+R
Sbjct: 144 DLLNQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARR 203
Query: 39 SVFIRLKCTLTSKGRNVNVKAAT-------------------YKVIHCTGHLVQNQTPAS 79
S F R+K L + + ++ T Y+VI CTG+L ++ TP
Sbjct: 204 SFFCRMK--LRAANNQIKEESDTSSSSRSSTKRKSKLSIDHKYRVIQCTGYL-KSWTPVK 260
Query: 80 NGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH 139
+ E QD N D T S C VAIG P+
Sbjct: 261 D-----EDQDGDSN--DQTTNIS--------------------------CLVAIGRIPPN 287
Query: 140 PANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHA 190
N VP S F+++HS + KF + D+ +GF P + S +++ H+
Sbjct: 288 ALNSSVPSSLDTHPNIRHVLFISRHSAEGKFLFVDQRATLVIGFLPQEILGTSFYEYFHS 347
Query: 191 QD 192
+D
Sbjct: 348 ED 349
>gi|383856080|ref|XP_003703538.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Megachile rotundata]
Length = 668
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 24/148 (16%)
Query: 62 YKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRR 121
Y V+HCTG+ +++ P + P G + D++ + +VG
Sbjct: 252 YAVVHCTGY-IKSWPPNGDFVPPCVP-------------GVGLADREAAN--VQVGPDGV 295
Query: 122 VVTE--PSHC-FVAIG--EPIPHPANYDVPLSQT---FLTKHSLDMKFTYADETMEDFLG 173
V E +HC VAIG + P + D+ S + F+++HS + KFT+ D+ + LG
Sbjct: 296 VSDENVSTHCCLVAIGRLQVTSTPNSSDLAGSNSNNEFISRHSAEGKFTFVDQRVGGILG 355
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+ P + ++F H +D H++ +F+
Sbjct: 356 YTPSELLGHPCYEFFHPEDLTHMRESFE 383
>gi|31874126|emb|CAD97972.1| hypothetical protein [Homo sapiens]
Length = 566
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 323 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 381
Query: 196 IQNAFK 201
++ +F+
Sbjct: 382 LRESFQ 387
>gi|67971702|dbj|BAE02193.1| unnamed protein product [Macaca fascicularis]
Length = 606
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 128 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 187
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 188 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 243
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 244 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 273
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 274 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 332
Query: 196 IQNAFK 201
++ +F+
Sbjct: 333 LRESFQ 338
>gi|332000000|ref|NP_001193634.1| aryl hydrocarbon receptor nuclear translocator 2 [Bos taurus]
Length = 717
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRLTTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 323 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 382
Query: 197 QNAFK 201
+ +F+
Sbjct: 383 RESFQ 387
>gi|348525938|ref|XP_003450478.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 1 [Oreochromis niloticus]
Length = 732
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ LS + D++ ++RS
Sbjct: 193 EWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 252
Query: 40 VFIRLKCTLT-----SKGRNVNVKA-------------ATYKVIHCTGHLVQNQTPASNG 81
R++C S R N++ A Y V+HCTG+ ++ PA
Sbjct: 253 FICRMRCGSAPLDHISLNRLANMRKRYRNGLGPSKEGEAQYSVVHCTGY-IKAWPPA--- 308
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D E G+ + +C VAIG +
Sbjct: 309 -------------------GMTIPEED-----TEAGQTGK------YCLVAIGRLQVTSS 338
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + D + + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 339 PVSMDMNGLSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 398
Query: 197 QNAFK 201
+ +F+
Sbjct: 399 RESFQ 403
>gi|395839342|ref|XP_003792551.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like protein 2 [Otolemur garnettii]
Length = 670
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN-------------------HTEDIR------A 36
+ L GQS+++ HP D ++VK LS++ H R +
Sbjct: 253 QASLTGQSLFDFLHPKDVAKVKEQLSSSDISPREKLIDAKTGLQVHSHFRAGRMHMYSGS 312
Query: 37 QRSVFIRLK-CTLTSKGR------NVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K + + + IHCTG+L ++ P+ G ME +
Sbjct: 313 RRSFFCRIKSCKISVKEEHECFPNSKKKELRKFYTIHCTGYL-RSWPPSIVG---MEEER 368
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
+I+ + N +C VAIG P+ P N ++
Sbjct: 369 DIKKDNSNF-----------------------------NCLVAIGRLHPYIVPQNSGEIK 399
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 400 VKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 446
>gi|335292277|ref|XP_003356697.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Sus scrofa]
Length = 706
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 312 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 371
Query: 197 QNAFK 201
+ +F+
Sbjct: 372 RESFQ 376
>gi|440910985|gb|ELR60718.1| hypothetical protein M91_03833, partial [Bos grunniens mutus]
Length = 707
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 167 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 226
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 227 FICRMRCGNAPLDHLPLNRLTTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 282
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 283 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 312
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 313 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 372
Query: 197 QNAFK 201
+ +F+
Sbjct: 373 RESFQ 377
>gi|426248178|ref|XP_004017842.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Ovis
aries]
Length = 706
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRLTTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H++D H+
Sbjct: 312 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHSEDQSHL 371
Query: 197 QNAFK 201
+ +F+
Sbjct: 372 RESFQ 376
>gi|342520668|gb|AEL30666.1| aryl hydrocarbon receptor nuclear translocator, partial [Oryzias
melastigma]
Length = 297
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ LS + D++ ++RS
Sbjct: 40 EWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 99
Query: 40 VFIRLKCTLT-----SKGRNVNVKA-------------ATYKVIHCTGHLVQNQTPASNG 81
R++C S R N++ A Y V+HCTG+ ++ PA
Sbjct: 100 FICRMRCGSAPLDHISLNRLSNMRKRYRNGLGPSKEGEAQYSVVHCTGY-IKAWPPA--- 155
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D E G+ + +C VAIG +
Sbjct: 156 -------------------GMTIPEEDT-----EAGQTGK------YCLVAIGRLQVTSS 185
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P + D + + FL++H+ D T+ D + +G+ P + K + +F H +D H+
Sbjct: 186 PVSMDMNGLSVPTEFLSRHNSDGVITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQSHL 245
Query: 197 QNAFK 201
+ +F+
Sbjct: 246 RESFQ 250
>gi|326926724|ref|XP_003209548.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Meleagris gallopavo]
Length = 751
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 211 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 270
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 271 FICRMRCGNAPLDHLPLNRITTMRKRYRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 326
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 327 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 356
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 357 PVCMDMN-GMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 415
Query: 196 IQNAFK 201
++ +F+
Sbjct: 416 LRESFQ 421
>gi|431920300|gb|ELK18335.1| Aryl hydrocarbon receptor nuclear translocator 2 [Pteropus alecto]
Length = 636
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 39/148 (26%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
A Y V+HCTG+ ++ PA G I ++D +VG+
Sbjct: 199 AQYAVVHCTGY-IKAWPPA----------------------GMTIPEED-----ADVGQG 230
Query: 120 RRVVTEPSHCFVAIG--EPIPHPANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGF 174
+ +C VAIG + P D + + FL++HS D T+ D +G+
Sbjct: 231 SK------YCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHSSDAVITFVDPRCISVIGY 284
Query: 175 NPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
P + K + +F H++D H++ +F+
Sbjct: 285 QPQDLLGKDILEFCHSEDQSHLRESFQQ 312
>gi|326916149|ref|XP_003204373.1| PREDICTED: single-minded homolog 1-like, partial [Meleagris
gallopavo]
Length = 592
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 130 FVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++
Sbjct: 36 LVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHV 95
Query: 189 HAQDSFHIQNA 199
H D+FH++ A
Sbjct: 96 HGCDTFHLRCA 106
>gi|118095884|ref|XP_413854.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Gallus
gallus]
Length = 716
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 176 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 236 FICRMRCGNAPLDHLPLNRITTMRKRYRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 292 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 321
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 322 PVCMDMN-GMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 380
Query: 196 IQNAFK 201
++ +F+
Sbjct: 381 LRESFQ 386
>gi|121309839|dbj|BAF44221.1| aryl hydrocarbon receptor nuclear translocator 2 [Phalacrocorax
carbo]
Length = 716
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 176 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 236 FICRMRCGNAPLDHLPLNRITTMRKRYRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 292 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 321
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 322 PVCMDMN-GMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 380
Query: 196 IQNAFK 201
++ +F+
Sbjct: 381 LRESFQ 386
>gi|30060330|gb|AAO89095.1| ARNT2 exon 19 insertion variant [Rattus norvegicus]
gi|149057443|gb|EDM08766.1| aryl hydrocarbon receptor nuclear translocator 2, isoform CRA_b
[Rattus norvegicus]
Length = 689
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G +I ++D +VG+ + +C VAIG +
Sbjct: 293 -------------------GMSIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 140 PANYDVP---LSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D+ + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 323 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 382
Query: 197 QNAFK 201
+ +F+
Sbjct: 383 RESFQ 387
>gi|301763481|ref|XP_002917162.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Ailuropoda melanoleuca]
Length = 692
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 69/235 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR------------------------AQ 37
+ L GQS+++ HP D ++VK LS++ + + ++
Sbjct: 277 QASLTGQSLFDFLHPKDVAKVKEQLSSDISPREKLIDAKTGLQVHRNFHSGRTHVYSGSR 336
Query: 38 RSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQDN 90
RS F R+K C + K + + + K IHCTG+L ++ P G
Sbjct: 337 RSFFCRIKSCKIAVKEEHECLSTSKKKDHRKFCTIHCTGYL-RSWPPNIVG--------- 386
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVPL 147
+E + DN K DS C VAIG P+ P N ++ +
Sbjct: 387 MEEERDN---------KKDSN---------------FTCLVAIGRLHPYIVPQNSGEIKV 422
Query: 148 SQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
T F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ N K
Sbjct: 423 KPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTNKHK 477
>gi|449471188|ref|XP_002197431.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2
[Taeniopygia guttata]
Length = 716
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 176 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 236 FICRMRCGNAPLDHLPLNRITTMRKRYRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 292 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 321
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 322 PVCMDMSGMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 381
Query: 197 QNAFK 201
+ +F+
Sbjct: 382 RESFQ 386
>gi|332839706|ref|XP_003313825.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 3 [Pan troglodytes]
Length = 621
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 205 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 264
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 265 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 320
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 321 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 351
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 352 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 398
>gi|281352847|gb|EFB28431.1| hypothetical protein PANDA_005354 [Ailuropoda melanoleuca]
Length = 621
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 69/235 (29%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR------------------------AQ 37
+ L GQS+++ HP D ++VK LS++ + + ++
Sbjct: 206 QASLTGQSLFDFLHPKDVAKVKEQLSSDISPREKLIDAKTGLQVHRNFHSGRTHVYSGSR 265
Query: 38 RSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQDN 90
RS F R+K C + K + + + K IHCTG+L ++ P G
Sbjct: 266 RSFFCRIKSCKIAVKEEHECLSTSKKKDHRKFCTIHCTGYL-RSWPPNIVG--------- 315
Query: 91 IENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVPL 147
+E + DN K DS C VAIG P+ P N ++ +
Sbjct: 316 MEEERDN---------KKDSN---------------FTCLVAIGRLHPYIVPQNSGEIKV 351
Query: 148 SQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
T F+T+ +++ KF Y D+ LG+ P + S +++ H D ++ N K
Sbjct: 352 KPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTNKHK 406
>gi|158631187|ref|NP_036913.3| aryl hydrocarbon receptor nuclear translocator 2 [Rattus
norvegicus]
gi|81864989|sp|Q78E60.1|ARNT2_RAT RecName: Full=Aryl hydrocarbon receptor nuclear translocator 2;
Short=ARNT protein 2
gi|1408268|gb|AAB03666.1| aryl hydrocarbon receptor nuclear translocator 2 [Rattus
norvegicus]
gi|149057442|gb|EDM08765.1| aryl hydrocarbon receptor nuclear translocator 2, isoform CRA_a
[Rattus norvegicus]
Length = 712
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G +I ++D +VG+ + +C VAIG +
Sbjct: 293 -------------------GMSIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 140 PANYDVP---LSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D+ + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 323 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 382
Query: 197 QNAFK 201
+ +F+
Sbjct: 383 RESFQ 387
>gi|195020286|ref|XP_001985163.1| GH16911 [Drosophila grimshawi]
gi|193898645|gb|EDV97511.1| GH16911 [Drosophila grimshawi]
Length = 409
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 91/244 (37%), Gaps = 88/244 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 140 QADLLGQSWFDVLHPKDIVKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 199
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT------------------YKVIHCTGHLVQNQTPA 78
+RS F R+K + + + + Y+VI CTG+L ++ TP
Sbjct: 200 RRSFFCRMKLRAANNNQIKDESDTSSSSRSSTKRKSKLNMDHKYQVIQCTGYL-KSWTP- 257
Query: 79 SNGSTLMEPQDNIENQSDNTRRGSAIQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIGEPI 137
I+D+D D + +E+ T C VAIG
Sbjct: 258 -------------------------IKDEDQDGDSDEQ--------TTNLSCLVAIGRIP 284
Query: 138 PHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
P+ N P S F+++HS + KF + D+ +GF P + S +D+
Sbjct: 285 PNVLNSCPPTSLDNNPHIRHVLFISRHSAEGKFLFIDQRATLVIGFLPQEILGTSFYDYF 344
Query: 189 HAQD 192
H +D
Sbjct: 345 HKED 348
>gi|78057333|gb|ABB17190.1| aryl hydrocarbon receptor nuclear translocator 2 [Rattus
norvegicus]
Length = 712
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G +I ++D +VG+ + +C VAIG +
Sbjct: 293 -------------------GMSIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 140 PANYDVP---LSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D+ + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 323 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 382
Query: 197 QNAFK 201
+ +F+
Sbjct: 383 RESFQ 387
>gi|1470080|gb|AAB05247.1| aryl hydrocarbon receptor nuclear translocator 2, partial [Rattus
norvegicus]
Length = 749
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 214 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 273
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 274 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 329
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G +I ++D +VG+ + +C VAIG +
Sbjct: 330 -------------------GMSIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 359
Query: 140 PANYDVP---LSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D+ + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 360 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 419
Query: 197 QNAFK 201
+ +F+
Sbjct: 420 RESFQ 424
>gi|297691460|ref|XP_002823104.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 5 [Pongo abelii]
Length = 540
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 182 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 241
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 242 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 298 NSKKDNSNFT-----------------------------CLVAIGRLQPYVVPQNSGEIN 328
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 329 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 375
>gi|426380053|ref|XP_004056698.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Gorilla gorilla gorilla]
Length = 717
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 323 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 381
Query: 196 IQNAFK 201
++ +F+
Sbjct: 382 LRESFQ 387
>gi|449281233|gb|EMC88354.1| Aryl hydrocarbon receptor nuclear translocator 2, partial [Columba
livia]
Length = 706
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRYRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEEDT-----DVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|168267286|dbj|BAG09699.1| aryl hydrocarbon receptor nuclear translocator 2 [synthetic
construct]
Length = 706
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|114658475|ref|XP_001156233.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
5 [Pan troglodytes]
gi|10242106|gb|AAG15310.1|AF185610_1 aryl-hydrocarbon receptor nuclear translocator 2 [Homo sapiens]
gi|119619520|gb|EAW99114.1| aryl-hydrocarbon receptor nuclear translocator 2 [Homo sapiens]
gi|194381270|dbj|BAG58589.1| unnamed protein product [Homo sapiens]
Length = 706
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|410046905|ref|XP_003952280.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Pan troglodytes]
Length = 540
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 182 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 241
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 242 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 298 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 328
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 329 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 375
>gi|68303555|ref|NP_055677.3| aryl hydrocarbon receptor nuclear translocator 2 [Homo sapiens]
gi|125987793|sp|Q9HBZ2.2|ARNT2_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator 2;
Short=ARNT protein 2; AltName: Full=Class E basic
helix-loop-helix protein 1; Short=bHLHe1
gi|380784501|gb|AFE64126.1| aryl hydrocarbon receptor nuclear translocator 2 [Macaca mulatta]
gi|384941258|gb|AFI34234.1| aryl hydrocarbon receptor nuclear translocator 2 [Macaca mulatta]
gi|410291822|gb|JAA24511.1| aryl-hydrocarbon receptor nuclear translocator 2 [Pan troglodytes]
Length = 717
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 323 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 381
Query: 196 IQNAFK 201
++ +F+
Sbjct: 382 LRESFQ 387
>gi|395822653|ref|XP_003784628.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Otolemur garnettii]
Length = 706
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLSRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|395822651|ref|XP_003784627.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Otolemur garnettii]
Length = 717
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLSRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 323 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 381
Query: 196 IQNAFK 201
++ +F+
Sbjct: 382 LRESFQ 387
>gi|348580033|ref|XP_003475783.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 2 [Cavia porcellus]
Length = 706
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|332252641|ref|XP_003275462.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator 2 [Nomascus leucogenys]
Length = 708
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 168 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 227
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 228 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 283
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 284 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 313
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 314 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 372
Query: 196 IQNAFK 201
++ +F+
Sbjct: 373 LRESFQ 378
>gi|297691458|ref|XP_002823103.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 4 [Pongo abelii]
Length = 622
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 205 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 264
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 265 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 320
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 321 NSKKDNSNFT-----------------------------CLVAIGRLQPYVVPQNSGEIN 351
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 352 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 398
>gi|348580031|ref|XP_003475782.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 1 [Cavia porcellus]
Length = 701
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|397478912|ref|XP_003810778.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Pan
paniscus]
Length = 706
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|351704927|gb|EHB07846.1| Aryl hydrocarbon receptor nuclear translocator 2, partial
[Heterocephalus glaber]
Length = 708
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 168 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 227
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 228 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 283
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 284 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 313
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 314 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 372
Query: 196 IQNAFK 201
++ +F+
Sbjct: 373 LRESFQ 378
>gi|198465431|ref|XP_001353624.2| GA21284 [Drosophila pseudoobscura pseudoobscura]
gi|198150156|gb|EAL31138.2| GA21284 [Drosophila pseudoobscura pseudoobscura]
Length = 436
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 91/244 (37%), Gaps = 89/244 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 168 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 227
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT-------------------YKVIHCTGHLVQNQTP 77
+RS F R+K L + + ++ T Y+VI CTG+L ++ TP
Sbjct: 228 RRSFFCRMK--LRAANNQIKEESDTSSSSRSSTKRKSKLSIDHKYRVIQCTGYL-KSWTP 284
Query: 78 ASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPI 137
+ E Q+ D DD T C VAIG
Sbjct: 285 IKD-----EEQEG---------------DSDDQ-------------TTNLSCLVAIGRIP 311
Query: 138 PHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
P+ N VP + F+++HS + KF + D+ +GF P + S +++
Sbjct: 312 PNVLNSCVPTAVENHPNIQHVLFISRHSAEGKFLFIDQRATLVIGFLPQEILGTSFYEYF 371
Query: 189 HAQD 192
H +D
Sbjct: 372 HNED 375
>gi|426380051|ref|XP_004056697.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Gorilla gorilla gorilla]
Length = 706
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|40788209|dbj|BAA20766.2| KIAA0307 [Homo sapiens]
Length = 716
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 176 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 235
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 236 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 291
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 292 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 321
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 322 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 380
Query: 196 IQNAFK 201
++ +F+
Sbjct: 381 LRESFQ 386
>gi|354504024|ref|XP_003514079.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Cricetulus griseus]
Length = 621
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 81/246 (32%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 165 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 224
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 225 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 280
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 281 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 310
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 311 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 370
Query: 197 QNAFKN 202
+ +F+
Sbjct: 371 RESFQQ 376
>gi|332839700|ref|XP_520811.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 5 [Pan troglodytes]
Length = 587
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 171 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 230
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 231 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 286
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 287 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 317
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 318 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 364
>gi|23271921|gb|AAH36099.1| ARNT2 protein [Homo sapiens]
gi|123995001|gb|ABM85102.1| aryl-hydrocarbon receptor nuclear translocator 2 [synthetic
construct]
gi|124126909|gb|ABM92227.1| aryl-hydrocarbon receptor nuclear translocator 2 [synthetic
construct]
Length = 716
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 323 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 381
Query: 196 IQNAFK 201
++ +F+
Sbjct: 382 LRESFQ 387
>gi|355692930|gb|EHH27533.1| Aryl hydrocarbon receptor nuclear translocator 2, partial [Macaca
mulatta]
gi|355778241|gb|EHH63277.1| Aryl hydrocarbon receptor nuclear translocator 2, partial [Macaca
fascicularis]
Length = 708
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 168 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 227
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 228 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 283
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 284 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 313
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 314 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 372
Query: 196 IQNAFK 201
++ +F+
Sbjct: 373 LRESFQ 378
>gi|332839704|ref|XP_003313824.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 2 [Pan troglodytes]
Length = 635
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 219 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 278
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 279 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 334
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 335 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 365
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 366 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 412
>gi|296204244|ref|XP_002749246.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Callithrix jacchus]
Length = 706
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGLQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEEDT-----DVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|195173139|ref|XP_002027351.1| GL15678 [Drosophila persimilis]
gi|194113194|gb|EDW35237.1| GL15678 [Drosophila persimilis]
Length = 436
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 91/244 (37%), Gaps = 89/244 (36%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA------NHTEDIR-------------------A 36
+ DL+GQS ++V HP D +VK LS+ D + A
Sbjct: 168 QADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGA 227
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAAT-------------------YKVIHCTGHLVQNQTP 77
+RS F R+K L + + ++ T Y+VI CTG+L ++ TP
Sbjct: 228 RRSFFCRMK--LRAANNQIKEESDTSSSSRSSTKRKSKLSIDHKYRVIQCTGYL-KSWTP 284
Query: 78 ASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPI 137
+ E Q+ D DD T C VAIG
Sbjct: 285 IKD-----EEQEG---------------DSDDQ-------------TTNLSCLVAIGRIP 311
Query: 138 PHPANYDVPLSQ---------TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
P+ N VP + F+++HS + KF + D+ +GF P + S +++
Sbjct: 312 PNVLNSCVPTAVENHPNIQHVLFISRHSAEGKFLFIDQRATLVIGFLPQEILGTSFYEYF 371
Query: 189 HAQD 192
H +D
Sbjct: 372 HNED 375
>gi|116235171|dbj|BAF35030.1| CYCLE [Athalia rosae]
Length = 611
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 45/229 (19%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR-------------------AQR 38
DL+GQS +++ HP D ++VK LS++ D++ A+R
Sbjct: 156 DLLGQSWFDILHPKDVAKVKEQLSSSDLNPRERLIDVKTMLPVRTDVPQDVSRLCPGARR 215
Query: 39 SVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNT 98
S F R+K L + + C V+ + + G + Q NIE +
Sbjct: 216 SFFCRMKRKLDN--------------VRCGDPQVKEEADTTTGCHRRKKQQNIERKYCVI 261
Query: 99 RRGSAIQDKDDSE-PEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-----SQTFL 152
+ ++ ++ EE + T C VA+G P + P + F+
Sbjct: 262 QCMGYLKSWAPTKIGLEEQEGEGDGETCNLSCLVAVGRIQPSISALSAPRRPQLRTIQFV 321
Query: 153 TKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
++H++D KF D+ LGF P + S+++++H D H+ + K
Sbjct: 322 SRHAMDGKFLSVDQRATLVLGFLPQELLGTSMYEYYHHDDIPHLAESHK 370
>gi|403258341|ref|XP_003921731.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2
[Saimiri boliviensis boliviensis]
Length = 706
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 93/246 (37%), Gaps = 83/246 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSH 370
Query: 196 IQNAFK 201
++ +F+
Sbjct: 371 LRESFQ 376
>gi|297691456|ref|XP_002823102.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 3 [Pongo abelii]
Length = 636
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 219 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 278
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 279 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 334
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 335 NSKKDNSNFT-----------------------------CLVAIGRLQPYVVPQNSGEIN 365
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 366 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 412
>gi|26006133|dbj|BAC41409.1| mKIAA0307 protein [Mus musculus]
Length = 725
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 190 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 249
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 250 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 305
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 306 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 335
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 336 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 395
Query: 197 QNAFK 201
+ +F+
Sbjct: 396 RESFQ 400
>gi|332839702|ref|XP_003313823.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 1 [Pan troglodytes]
Length = 598
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 182 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 241
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 242 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 298 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 328
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 329 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 375
>gi|297691452|ref|XP_002823100.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 1 [Pongo abelii]
Length = 599
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---------------------HTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 182 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 241
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 242 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 297
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 298 NSKKDNSNFT-----------------------------CLVAIGRLQPYVVPQNSGEIN 328
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 329 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 375
>gi|1304146|dbj|BAA09799.1| Arnt2 [Mus musculus]
Length = 712
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 81/245 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 177 EWFGSTLYEQVHPDDVEKLREQLCTSENSITGRILDLKTGTVKKEGQQSSMRMCMGSRRS 236
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 292
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIG--EPIPH 139
G I ++D +VG+ + +C VAIG +
Sbjct: 293 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 322
Query: 140 PANYD---VPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
P D + + FL++H+ D T+ D +G+ P + K + +F H +D H+
Sbjct: 323 PVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL 382
Query: 197 QNAFK 201
+ +F+
Sbjct: 383 RESFQ 387
>gi|297691454|ref|XP_002823101.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 2 [Pongo abelii]
Length = 588
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 171 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 230
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 231 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 286
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 287 NSKKDNSNFT-----------------------------CLVAIGRLQPYVVPQNSGEIN 317
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 318 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 364
>gi|47563646|dbj|BAD20455.1| clock type A [Hyla japonica]
Length = 332
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 46/212 (21%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLK-----CTLTSKGRNVNVK 58
DL+ QSI+ +HSE+ ILS E+ + S +++ K C +G +
Sbjct: 139 DLVDQSIFNFIPEGEHSEIYKILSTRMVEN-SSLASDYLKTKNELEFCCHMLRGTVDPKE 197
Query: 59 AATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRG--SAIQDKDDSEPEEEV 116
ATY+ + C G+ +++N S++T G A+Q EE V
Sbjct: 198 PATYEFVKCIGNF-----------------KSLKNVSNSTHNGFDGALQRSLRPPYEERV 240
Query: 117 GEKRRVVTEPSHCFVA---IGEP--IPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDF 171
CFVA + P I + P + F ++HSL+ KF + D
Sbjct: 241 ------------CFVATVRLATPQFIKEMCTVEEPYEE-FTSRHSLEWKFLFLDHRAPPI 287
Query: 172 LGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNP 203
+G+ P + S +D++H D ++N K P
Sbjct: 288 IGYLPFEVLGTSGYDYYHVDD---LENLAKCP 316
>gi|167736305|dbj|BAG07409.1| cycle [Riptortus pedestris]
Length = 228
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 58/193 (30%)
Query: 36 AQRSVFIRLKC-TLTS-------------KGRNVNVKAAT---YKVIHCTGHLVQNQTPA 78
A+RS F R+KC T+T+ + + +AA+ Y+VI CTG+L P
Sbjct: 35 ARRSFFCRMKCKTVTTTVKEEADTTTGCHRRKKQQGQAASDKKYRVIQCTGYL----KPW 90
Query: 79 SNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE--- 135
+ +E + E + ++ C VA+G
Sbjct: 91 ATAKMCLEEEKESEPEGESCNLS---------------------------CLVAMGRVIV 123
Query: 136 -PIPH--PAN-YDVPLS---QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFH 188
P+PH P Y P++ F+++H++D KF + D+ LGF P + S+++++
Sbjct: 124 IPLPHQRPLRIYHTPITVRPLQFISRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYY 183
Query: 189 HAQDSFHIQNAFK 201
+ +D H+ + K
Sbjct: 184 YKEDIRHLAESHK 196
>gi|397517391|ref|XP_003828897.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Pan paniscus]
Length = 584
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 69/227 (30%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA---------------------NHTEDIR----A 36
+ L GQS+++ HP D ++VK LS+ HT R +
Sbjct: 168 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHTGRTRVYSGS 227
Query: 37 QRSVFIRLK-CTLTSK---GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQD 89
+RS F R+K C ++ K G N K ++ IHCTG+L ++ P G ME +
Sbjct: 228 RRSFFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYL-RSWPPNIVG---MEEER 283
Query: 90 NIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVP 146
N + + N C VAIG P+ P N ++
Sbjct: 284 NSKKDNSNFT-----------------------------CLVAIGRLQPYIVPQNSGEIN 314
Query: 147 LSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQD 192
+ T F+T+ +++ KF Y D+ LG+ P + S +++ H D
Sbjct: 315 VKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDD 361
>gi|291410472|ref|XP_002721520.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Oryctolagus cuniculus]
Length = 660
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 93/247 (37%), Gaps = 83/247 (33%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTE------DIR------------------AQRS 39
+ G ++YE HP D +++ L + D++ ++RS
Sbjct: 166 EWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRS 225
Query: 40 VFIRLKC--------------TLTSKGRN----VNVKAATYKVIHCTGHLVQNQTPASNG 81
R++C T+ + RN V A Y V+HCTG+ ++ PA
Sbjct: 226 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGY-IKAWPPA--- 281
Query: 82 STLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGE------ 135
G I ++D +VG+ + +C VAIG
Sbjct: 282 -------------------GMTIPEED-----ADVGQGSK------YCLVAIGRLQVTSS 311
Query: 136 PIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFH 195
P+ N + + FL++H+ D T+ D +G+ P + K + +F H +D H
Sbjct: 312 PVCMDMN-GMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDILGKDILEFCHPEDQSH 370
Query: 196 IQNAFKN 202
++ +F+
Sbjct: 371 LRESFQQ 377
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,226,439,452
Number of Sequences: 23463169
Number of extensions: 131720657
Number of successful extensions: 419117
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 524
Number of HSP's that attempted gapping in prelim test: 414590
Number of HSP's gapped (non-prelim): 3625
length of query: 211
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 75
effective length of database: 9,168,204,383
effective search space: 687615328725
effective search space used: 687615328725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)