Your job contains 1 sequence.
>psy10704
MKVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAA
TYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKR
RVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFI
AKSVFDFHHAQDSFHIQNAFKNPCYSCVIKS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10704
(211 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-706 - symbol:hif1ab "hypoxia-inducib... 228 8.5e-38 2
UNIPROTKB|F1NJK2 - symbol:HIF1A "Hypoxia-inducible factor... 216 1.9e-36 2
MGI|MGI:106918 - symbol:Hif1a "hypoxia inducible factor 1... 217 2.6e-36 2
UNIPROTKB|F1NQK5 - symbol:HIF1A "Hypoxia-inducible factor... 215 5.0e-36 2
UNIPROTKB|Q9YIB9 - symbol:HIF1A "Hypoxia-inducible factor... 215 5.0e-36 2
RGD|61928 - symbol:Hif1a "hypoxia-inducible factor 1, alp... 218 6.6e-36 2
UNIPROTKB|O35800 - symbol:Hif1a "Hypoxia-inducible factor... 218 6.6e-36 2
UNIPROTKB|F1LT63 - symbol:Hif1a "Hypoxia-inducible factor... 218 6.7e-36 2
UNIPROTKB|D4A8P8 - symbol:Hif1a "Hypoxia-inducible factor... 218 6.7e-36 2
UNIPROTKB|F8W9L0 - symbol:HIF1A "Hypoxia-inducible factor... 217 6.7e-36 2
UNIPROTKB|Q309Z6 - symbol:HIF1A "Hypoxia-inducible factor... 217 8.3e-36 2
UNIPROTKB|Q16665 - symbol:HIF1A "Hypoxia-inducible factor... 217 8.5e-36 2
UNIPROTKB|A8MYV6 - symbol:HIF1A "Hypoxia-inducible factor... 217 8.5e-36 2
UNIPROTKB|Q7YSE5 - symbol:Q7YSE5 "Hypoxia inducible facto... 216 1.1e-35 2
UNIPROTKB|Q64F54 - symbol:Q64F54 "Hypoxia-inducible facto... 216 1.1e-35 2
UNIPROTKB|Q4ZH58 - symbol:Q4ZH58 "Hypoxia-inducible facto... 216 1.1e-35 2
ZFIN|ZDB-GENE-060607-11 - symbol:epas1b "endothelial PAS ... 210 3.9e-35 2
UNIPROTKB|Q6H8T3 - symbol:hif-1a "Hypoxia inducible facto... 217 4.6e-35 2
UNIPROTKB|Q4R658 - symbol:Q4R658 "Testis cDNA, clone: Qts... 217 4.6e-35 2
UNIPROTKB|Q99814 - symbol:EPAS1 "Endothelial PAS domain-c... 210 3.0e-34 2
UNIPROTKB|F1S5K9 - symbol:EPAS1 "Uncharacterized protein"... 206 7.9e-34 2
UNIPROTKB|F1NG41 - symbol:EPAS1 "Uncharacterized protein"... 205 1.0e-33 2
UNIPROTKB|E2QUK0 - symbol:EPAS1 "Uncharacterized protein"... 206 1.0e-33 2
UNIPROTKB|A5PJT1 - symbol:EPAS1 "Uncharacterized protein"... 206 1.7e-33 2
MGI|MGI:109169 - symbol:Epas1 "endothelial PAS domain pro... 205 1.7e-33 2
ZFIN|ZDB-GENE-030131-4490 - symbol:epas1a "endothelial PA... 198 1.4e-32 2
RGD|68404 - symbol:Epas1 "endothelial PAS domain protein ... 198 1.5e-32 2
UNIPROTKB|Q9JHS1 - symbol:Epas1 "Endothelial PAS domain-c... 198 1.5e-32 2
ZFIN|ZDB-GENE-080917-55 - symbol:hif1aa "hypoxia-inducibl... 200 3.4e-32 2
UNIPROTKB|C9J9N2 - symbol:EPAS1 "Endothelial PAS domain-c... 210 2.9e-29 2
ZFIN|ZDB-GENE-040426-1315 - symbol:hif1al "hypoxia-induci... 192 4.3e-29 2
MGI|MGI:1859778 - symbol:Hif3a "hypoxia inducible factor ... 178 1.5e-28 2
RGD|70332 - symbol:Hif3a "hypoxia inducible factor 3, alp... 178 3.0e-28 2
UNIPROTKB|Q9JHS2 - symbol:Hif3a "Hypoxia-inducible factor... 178 3.0e-28 2
UNIPROTKB|F1RM22 - symbol:HIF3A "Uncharacterized protein"... 180 3.1e-28 2
UNIPROTKB|H0YDZ5 - symbol:HIF3A "Hypoxia-inducible factor... 174 4.9e-28 2
UNIPROTKB|F5H884 - symbol:HIF3A "Hypoxia-inducible factor... 174 1.0e-27 2
UNIPROTKB|E9PB04 - symbol:HIF3A "Hypoxia-inducible factor... 174 1.0e-27 2
UNIPROTKB|A7Z028 - symbol:HIF3A "HIF3A protein" species:9... 174 1.1e-27 2
UNIPROTKB|Q9Y2N7 - symbol:HIF3A "Hypoxia-inducible factor... 174 1.4e-27 2
UNIPROTKB|Q9I8A9 - symbol:hif1a "Hypoxia-inducible factor... 217 7.5e-23 2
ZFIN|ZDB-GENE-041210-5 - symbol:sim1b "single-minded homo... 155 2.7e-20 2
UNIPROTKB|E1BSJ1 - symbol:SIM2 "Uncharacterized protein" ... 156 9.2e-20 2
MGI|MGI:98306 - symbol:Sim1 "single-minded homolog 1 (Dro... 158 1.9e-19 2
RGD|1309949 - symbol:Sim1 "single-minded homolog 1 (Droso... 158 1.9e-19 2
UNIPROTKB|E1C5G3 - symbol:SIM1 "Uncharacterized protein" ... 158 1.9e-19 2
UNIPROTKB|F1N178 - symbol:SIM1 "Uncharacterized protein" ... 158 1.9e-19 2
UNIPROTKB|E2QWV9 - symbol:SIM1 "Uncharacterized protein" ... 158 1.9e-19 2
UNIPROTKB|P81133 - symbol:SIM1 "Single-minded homolog 1" ... 158 1.9e-19 2
UNIPROTKB|F1RYR5 - symbol:SIM1 "Uncharacterized protein" ... 158 1.9e-19 2
UNIPROTKB|H7BZX8 - symbol:SIM2 "Single-minded homolog 2" ... 156 2.0e-19 2
MGI|MGI:98307 - symbol:Sim2 "single-minded homolog 2 (Dro... 156 2.0e-19 2
UNIPROTKB|E1BJ63 - symbol:E1BJ63 "Uncharacterized protein... 156 2.3e-19 2
UNIPROTKB|F1MKK8 - symbol:LOC782260 "Uncharacterized prot... 156 2.5e-19 2
UNIPROTKB|E2RDR2 - symbol:SIM2 "Uncharacterized protein" ... 156 2.6e-19 2
RGD|1308016 - symbol:Sim2 "single-minded homolog 2 (Droso... 156 4.1e-19 2
UNIPROTKB|Q14190 - symbol:SIM2 "Single-minded homolog 2" ... 156 5.5e-19 2
UNIPROTKB|I3LA51 - symbol:SIM2 "Uncharacterized protein" ... 154 2.2e-18 2
ZFIN|ZDB-GENE-010803-1 - symbol:sim2 "single-minded homol... 161 3.1e-18 2
UNIPROTKB|Q0PGG7 - symbol:HIF1A "Hypoxia-inducible factor... 218 7.4e-17 2
UNIPROTKB|A0JND0 - symbol:HIF1A "Hypoxia-inducible factor... 218 9.2e-17 1
UNIPROTKB|Q9XTA5 - symbol:HIF1A "Hypoxia-inducible factor... 218 9.2e-17 1
UNIPROTKB|F1PZ54 - symbol:HIF1A "Uncharacterized protein"... 218 9.2e-17 1
UNIPROTKB|Q52RL7 - symbol:Q52RL7 "Hypoxia inducible facto... 218 9.2e-17 1
UNIPROTKB|F1SRU5 - symbol:HIF1A "Uncharacterized protein"... 218 9.3e-17 1
FB|FBgn0015542 - symbol:sima "similar" species:7227 "Dros... 210 2.3e-16 2
ZFIN|ZDB-GENE-020829-1 - symbol:sim1a "single-minded homo... 145 6.0e-16 2
UNIPROTKB|H0YI42 - symbol:NPAS3 "Neuronal PAS domain-cont... 102 1.2e-12 2
ZFIN|ZDB-GENE-050211-2 - symbol:hif1al2 "hypoxia-inducibl... 116 1.4e-11 2
UNIPROTKB|B4DR69 - symbol:NPAS1 "cDNA FLJ51724, highly si... 104 3.6e-11 3
MGI|MGI:109205 - symbol:Npas1 "neuronal PAS domain protei... 105 1.2e-09 3
UNIPROTKB|F1RM06 - symbol:NPAS1 "Uncharacterized protein"... 104 1.7e-09 3
UNIPROTKB|Q99742 - symbol:NPAS1 "Neuronal PAS domain-cont... 104 2.5e-09 3
ZFIN|ZDB-GENE-000509-2 - symbol:arntl2 "aryl hydrocarbon ... 120 3.1e-09 3
FB|FBgn0264075 - symbol:tgo "tango" species:7227 "Drosoph... 151 5.8e-09 1
UNIPROTKB|J9P6G5 - symbol:NPAS1 "Uncharacterized protein"... 98 9.4e-09 3
FB|FBgn0262139 - symbol:trh "trachealess" species:7227 "D... 134 1.9e-08 2
UNIPROTKB|F6ZT88 - symbol:NPAS3 "Uncharacterized protein"... 106 9.6e-08 2
ZFIN|ZDB-GENE-030408-1 - symbol:arntl1b "aryl hydrocarbon... 110 2.9e-07 3
FB|FBgn0004666 - symbol:sim "single-minded" species:7227 ... 98 3.1e-07 2
ZFIN|ZDB-GENE-000509-1 - symbol:arntl1a "aryl hydrocarbon... 109 3.6e-07 3
UNIPROTKB|Q91YA9 - symbol:Arntl "Aryl hydrocarbon recepto... 108 4.8e-07 3
MGI|MGI:1096381 - symbol:Arntl "aryl hydrocarbon receptor... 107 5.2e-07 3
UNIPROTKB|E1BLF5 - symbol:ARNTL "Uncharacterized protein"... 107 6.3e-07 3
UNIPROTKB|E2R130 - symbol:ARNTL "Uncharacterized protein"... 107 6.3e-07 3
UNIPROTKB|J9P3T5 - symbol:ARNTL2 "Uncharacterized protein... 99 6.8e-07 3
UNIPROTKB|J9NTT7 - symbol:ARNTL "Uncharacterized protein"... 107 7.6e-07 3
UNIPROTKB|F1PZY3 - symbol:ARNTL2 "Uncharacterized protein... 99 8.2e-07 3
UNIPROTKB|Q9I8T7 - symbol:ARNTL "Aryl hydrocarbon recepto... 106 9.1e-07 3
UNIPROTKB|F8W6J9 - symbol:ARNTL "Aryl hydrocarbon recepto... 103 1.1e-06 3
UNIPROTKB|Q5R4T2 - symbol:ARNTL "Aryl hydrocarbon recepto... 103 1.7e-06 3
UNIPROTKB|O88529 - symbol:ARNTL "Aryl hydrocarbon recepto... 103 1.7e-06 3
RGD|62003 - symbol:Arntl "aryl hydrocarbon receptor nucle... 103 1.7e-06 3
UNIPROTKB|Q9EPW1 - symbol:Arntl "Aryl hydrocarbon recepto... 103 1.7e-06 3
UNIPROTKB|O00327 - symbol:ARNTL "Aryl hydrocarbon recepto... 103 2.1e-06 3
UNIPROTKB|A0MLS5 - symbol:ARNTL "Aryl hydrocarbon recepto... 103 2.1e-06 3
UNIPROTKB|F1NQL8 - symbol:ARNTL2 "Aryl hydrocarbon recept... 127 1.3e-05 1
RGD|1310040 - symbol:Npas1 "neuronal PAS domain protein 1... 102 2.0e-05 2
UNIPROTKB|Q8QGQ7 - symbol:ARNTL2 "Aryl hydrocarbon recept... 107 2.2e-05 2
UNIPROTKB|E1C1C5 - symbol:ARNTL2 "Aryl hydrocarbon recept... 107 2.3e-05 2
WARNING: Descriptions of 16 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-040426-706 [details] [associations]
symbol:hif1ab "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) b"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-706 GO:GO:0005634 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OrthoDB:EOG40CHGP OMA:QNAQRKR
EMBL:BX255914 EMBL:AY326951 IPI:IPI00491851 UniGene:Dr.75612
SMR:Q6EHI4 STRING:Q6EHI4 Ensembl:ENSDART00000018500
InParanoid:Q6EHI4 Uniprot:Q6EHI4
Length = 777
Score = 228 (85.3 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 43/89 (48%), Positives = 61/89 (68%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSIL----SANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKA 59
DL G SI+E +HPCDH E++ +L + T++ +RS F+R+KCTLTS+GR VN+K+
Sbjct: 127 DLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNIKS 186
Query: 60 ATYKVIHCTGHL-VQNQTPASNGSTLMEP 87
AT+KV+HC GH+ V + AS S EP
Sbjct: 187 ATWKVLHCAGHVRVHEGSEASEDSGFKEP 215
Score = 215 (80.7 bits), Expect = 8.5e-38, Sum P(2) = 8.5e-38
Identities = 43/96 (44%), Positives = 63/96 (65%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
+ SE E+ G K VT V I EPIPHP+N +VPL S+TFL++H+LDMKF+Y DE
Sbjct: 202 EGSEASEDSGFKEPPVTY----LVLICEPIPHPSNIEVPLDSKTFLSRHTLDMKFSYCDE 257
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
+ + +G+ PD + +SV++++HA DS H+ N
Sbjct: 258 RITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHN 293
>UNIPROTKB|F1NJK2 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 IPI:IPI00597728
EMBL:AADN02003885 EMBL:AADN02003886 Ensembl:ENSGALT00000019364
ArrayExpress:F1NJK2 Uniprot:F1NJK2
Length = 810
Score = 216 (81.1 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 38/72 (52%), Positives = 55/72 (76%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILS-ANHTEDIRAQ---RSVFIRLKCTLTSKGRNVNVKA 59
DL G S+++ THPCDH E++ +L+ N + + Q RS F+R+KCTLTS+GR VN+K+
Sbjct: 126 DLTGHSVFDFTHPCDHEELREMLTHRNENKSGKEQNTERSFFLRMKCTLTSRGRTVNIKS 185
Query: 60 ATYKVIHCTGHL 71
AT+KV+HCTGH+
Sbjct: 186 ATWKVLHCTGHI 197
Score = 215 (80.7 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 126 PSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+
Sbjct: 215 PMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSI 274
Query: 185 FDFHHAQDSFHI 196
++++HA DS H+
Sbjct: 275 YEYYHALDSDHL 286
>MGI|MGI:106918 [details] [associations]
symbol:Hif1a "hypoxia inducible factor 1, alpha subunit"
species:10090 "Mus musculus" [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0001076 "RNA
polymerase II transcription factor binding transcription factor
activity" evidence=IPI] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001666 "response to hypoxia" evidence=IGI;ISO;IMP;IDA]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0001837
"epithelial to mesenchymal transition" evidence=IMP] [GO:0001892
"embryonic placenta development" evidence=IGI;IMP] [GO:0001922 "B-1
B cell homeostasis" evidence=IMP] [GO:0001944 "vasculature
development" evidence=IGI] [GO:0001947 "heart looping"
evidence=IMP] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IGI] [GO:0002248 "connective tissue
replacement involved in inflammatory response wound healing"
evidence=IMP] [GO:0003151 "outflow tract morphogenesis"
evidence=IMP] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IGI;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006089 "lactate metabolic process" evidence=IMP] [GO:0006110
"regulation of glycolysis" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IMP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007595
"lactation" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008542 "visual learning"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010573 "vascular endothelial growth factor
production" evidence=ISO] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=ISO] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IMP]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=ISO] [GO:0014850 "response to muscle activity"
evidence=IMP] [GO:0019896 "axon transport of mitochondrion"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0021502
"neural fold elevation formation" evidence=IMP] [GO:0021987
"cerebral cortex development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IGI;IMP] [GO:0030502 "negative regulation
of bone mineralization" evidence=IMP] [GO:0030949 "positive
regulation of vascular endothelial growth factor receptor signaling
pathway" evidence=IMP] [GO:0031514 "motile cilium" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IMP] [GO:0032364 "oxygen homeostasis" evidence=ISO;IMP]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=ISO] [GO:0032963 "collagen metabolic process"
evidence=IMP] [GO:0034244 "negative regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO]
[GO:0035035 "histone acetyltransferase binding" evidence=ISO]
[GO:0035162 "embryonic hemopoiesis" evidence=IMP] [GO:0035774
"positive regulation of insulin secretion involved in cellular
response to glucose stimulus" evidence=IMP] [GO:0042127 "regulation
of cell proliferation" evidence=IMP] [GO:0042541 "hemoglobin
biosynthetic process" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IMP] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO;IMP] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=ISO;IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045906 "negative regulation of
vasoconstriction" evidence=ISO] [GO:0045926 "negative regulation of
growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IMP] [GO:0046886 "positive regulation of hormone
biosynthetic process" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048514 "blood vessel
morphogenesis" evidence=IMP] [GO:0048546 "digestive tract
morphogenesis" evidence=IMP] [GO:0048661 "positive regulation of
smooth muscle cell proliferation" evidence=ISO] [GO:0050790
"regulation of catalytic activity" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0051541 "elastin
metabolic process" evidence=IMP] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] [GO:0060574 "intestinal epithelial cell
maturation" evidence=IMP] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IMP] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IMP] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IGI;IMP] [GO:2001054 "negative regulation of mesenchymal
cell apoptotic process" evidence=IMP] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=IPI] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:106918 GO:GO:0005634
GO:GO:0005737 GO:GO:0021987 GO:GO:0005730 GO:GO:0035774
GO:GO:0032869 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0009749 GO:GO:0043565 GO:GO:0048661 GO:GO:0008542
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0001525 GO:GO:0042593 GO:GO:0032007 GO:GO:0006879
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0014850 GO:GO:0001837 GO:GO:0030949
GO:GO:0071347 GO:GO:0003151 GO:GO:0035035 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 eggNOG:NOG289264 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
OrthoDB:EOG40CHGP CTD:3091 KO:K08268 OMA:QNAQRKR ChiTaRS:HIF1A
GO:GO:0001922 GO:GO:0032963 GO:GO:0002248 GO:GO:0051541
GO:GO:0060574 GO:GO:2001054 GO:GO:0021502 GO:GO:0032909
GO:GO:0010573 EMBL:U59496 EMBL:AF003695 EMBL:Y09085 EMBL:Y13656
EMBL:AF004155 EMBL:AF004141 EMBL:AF004142 EMBL:AF004143
EMBL:AF004144 EMBL:AF004145 EMBL:AF004146 EMBL:AF004147
EMBL:AF004148 EMBL:AF004149 EMBL:AF004150 EMBL:AF004151
EMBL:AF004152 EMBL:AF004153 EMBL:AF004154 EMBL:AK034087
EMBL:AK076395 EMBL:AK033471 EMBL:AK017853 EMBL:BC026139 EMBL:X95580
EMBL:X95002 IPI:IPI00336700 IPI:IPI00406683 PIR:JC4837
RefSeq:NP_034561.2 UniGene:Mm.3879 UniGene:Mm.397466
UniGene:Mm.446610 ProteinModelPortal:Q61221 SMR:Q61221
IntAct:Q61221 MINT:MINT-1179248 STRING:Q61221 PhosphoSite:Q61221
PRIDE:Q61221 Ensembl:ENSMUST00000021530 Ensembl:ENSMUST00000110461
Ensembl:ENSMUST00000110464 GeneID:15251 KEGG:mmu:15251
UCSC:uc007nwo.2 UCSC:uc007nwq.2 InParanoid:Q61221 BindingDB:Q61221
ChEMBL:CHEMBL6046 NextBio:287865 Bgee:Q61221 CleanEx:MM_HIF1A
Genevestigator:Q61221 GermOnline:ENSMUSG00000021109 Uniprot:Q61221
Length = 836
Score = 217 (81.4 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFT 162
+ D + ++P+ G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+
Sbjct: 200 VYDTNSNQPQ--CGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFS 253
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 254 YCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 213 (80.0 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 35/73 (47%), Positives = 56/73 (76%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + +++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKELNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
>UNIPROTKB|F1NQK5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001755 "neural crest
cell migration" evidence=IEA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0002248 "connective tissue
replacement involved in inflammatory response wound healing"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0030154 GO:GO:0005730 GO:GO:0035774
GO:GO:0006110 GO:GO:0043565 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0042593 GO:GO:0032007
GO:GO:0006879 GO:GO:0005667 GO:GO:0003705 GO:GO:0042127
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0014850
GO:GO:0030949 GO:GO:0071347 GO:GO:0010634 GO:GO:0046886
GO:GO:0043619 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OMA:QNAQRKR GO:GO:0001922
GO:GO:0051541 GO:GO:2001054 GO:GO:0032909 EMBL:AADN02003885
EMBL:AADN02003886 IPI:IPI00822528 Ensembl:ENSGALT00000037380
ArrayExpress:F1NQK5 Uniprot:F1NQK5
Length = 811
Score = 215 (80.7 bits), Expect = 5.0e-36, Sum P(2) = 5.0e-36
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 126 PSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+
Sbjct: 216 PMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSI 275
Query: 185 FDFHHAQDSFHI 196
++++HA DS H+
Sbjct: 276 YEYYHALDSDHL 287
Score = 212 (79.7 bits), Expect = 5.0e-36, Sum P(2) = 5.0e-36
Identities = 36/73 (49%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
DL G S+++ THPCDH E++ +L+ + ++ +RS F+R+KCTLTS+GR VN+K
Sbjct: 126 DLTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
>UNIPROTKB|Q9YIB9 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 OrthoDB:EOG40CHGP EMBL:AB013746
IPI:IPI00597728 PIR:JC7619 RefSeq:NP_989628.1 UniGene:Gga.4933
ProteinModelPortal:Q9YIB9 SMR:Q9YIB9 STRING:Q9YIB9 PRIDE:Q9YIB9
GeneID:374177 KEGG:gga:374177 CTD:3091 KO:K08268 NextBio:20813683
Uniprot:Q9YIB9
Length = 811
Score = 215 (80.7 bits), Expect = 5.0e-36, Sum P(2) = 5.0e-36
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 126 PSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I EPIPHP+N +VPL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+
Sbjct: 216 PMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSI 275
Query: 185 FDFHHAQDSFHI 196
++++HA DS H+
Sbjct: 276 YEYYHALDSDHL 287
Score = 212 (79.7 bits), Expect = 5.0e-36, Sum P(2) = 5.0e-36
Identities = 36/73 (49%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
DL G S+++ THPCDH E++ +L+ + ++ +RS F+R+KCTLTS+GR VN+K
Sbjct: 126 DLTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
>RGD|61928 [details] [associations]
symbol:Hif1a "hypoxia-inducible factor 1, alpha subunit (basic
helix-loop-helix transcription factor)" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA;ISO] [GO:0001076 "RNA polymerase II
transcription factor binding transcription factor activity"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001568 "blood
vessel development" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO;ISS;IDA] [GO:0001755 "neural crest cell migration"
evidence=IEA;ISO] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA;ISO] [GO:0001892 "embryonic placenta development"
evidence=IEA;ISO] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA;ISO] [GO:0001944 "vasculature development"
evidence=ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0002052 "positive regulation of neuroblast proliferation"
evidence=IEA;ISO] [GO:0002248 "connective tissue replacement
involved in inflammatory response wound healing" evidence=IEA;ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
[GO:0003208 "cardiac ventricle morphogenesis" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003690 "double-stranded
DNA binding" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS;IDA;TAS] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006089 "lactate
metabolic process" evidence=IEA;ISO] [GO:0006110 "regulation of
glycolysis" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;TAS] [GO:0006879
"cellular iron ion homeostasis" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007595 "lactation"
evidence=IEA;ISO] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008542 "visual learning"
evidence=IEA;ISO] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA;ISO] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA;ISO]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA;ISO] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA;ISO] [GO:0014850 "response to
muscle activity" evidence=IEA;ISO] [GO:0019896 "axon transport of
mitochondrion" evidence=IEA;ISO;ISS] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IEA;ISO]
[GO:0021502 "neural fold elevation formation" evidence=IEA;ISO]
[GO:0021987 "cerebral cortex development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA;ISO]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA;ISO] [GO:0031514
"motile cilium" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032007 "negative regulation of TOR
signaling cascade" evidence=IEA;ISO] [GO:0032364 "oxygen
homeostasis" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0032909 "regulation of transforming growth factor
beta2 production" evidence=IEA;ISO] [GO:0032963 "collagen metabolic
process" evidence=IEA;ISO] [GO:0034244 "negative regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA;ISO;ISS] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA;ISO] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0042541 "hemoglobin biosynthetic process"
evidence=IEA;ISO] [GO:0042593 "glucose homeostasis"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO;IDA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA;ISO;IMP] [GO:0043627 "response to
estrogen stimulus" evidence=IEP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO;ISS] [GO:0045648
"positive regulation of erythrocyte differentiation"
evidence=IEA;ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045906 "negative regulation of
vasoconstriction" evidence=IMP] [GO:0045926 "negative regulation of
growth" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA;IMP]
[GO:0046716 "muscle cell homeostasis" evidence=IEA;ISO] [GO:0046886
"positive regulation of hormone biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;ISS;IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis" evidence=ISO]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA;ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=IMP] [GO:0050790 "regulation of catalytic
activity" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0051541 "elastin metabolic process"
evidence=IEA;ISO] [GO:0051879 "Hsp90 protein binding"
evidence=IEA;ISO] [GO:0060135 "maternal process involved in female
pregnancy" evidence=IEP] [GO:0060574 "intestinal epithelial cell
maturation" evidence=IEA;ISO] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA;ISO] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IEA;ISO] [GO:0061419 "positive regulation
of transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA;ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEP] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA;ISO] [GO:0071407 "cellular response to
organic cyclic compound" evidence=IEP] [GO:0071456 "cellular
response to hypoxia" evidence=ISO;ISS] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA;ISO] [GO:2001054 "negative
regulation of mesenchymal cell apoptotic process" evidence=IEA;ISO]
[GO:2001141 "regulation of RNA biosynthetic process" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:61928 GO:GO:0005634 GO:GO:0005737
GO:GO:0043066 GO:GO:0009612 GO:GO:0032869 GO:GO:0060135
GO:GO:0009749 GO:GO:0048661 GO:GO:0045944 GO:GO:0071456
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0044212
GO:GO:0043065 GO:GO:0004871 GO:GO:0003690 GO:GO:0019896
GO:GO:0046982 GO:GO:0043627 GO:GO:0045906 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407 GO:GO:0035035
GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 218 (81.8 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 39/90 (43%), Positives = 62/90 (68%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D S + + G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 202 DTSSNQPQCGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 257
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ P+ + +S+++++HA DS H+
Sbjct: 258 RITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 37 (18.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 76 TPASNGSTLMEPQ--DNIENQSDNTRRGSAIQDKDDSE 111
+P S G + PQ D + SD + R S+ + SE
Sbjct: 480 SPESLGLSFTMPQIQDQPASPSDGSTRQSSPEPNSPSE 517
>UNIPROTKB|O35800 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005634
GO:GO:0005737 GO:GO:0043066 GO:GO:0009612 GO:GO:0032869
GO:GO:0060135 GO:GO:0009749 GO:GO:0048661 GO:GO:0045944
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 GO:GO:0071222
GO:GO:0044212 GO:GO:0043065 GO:GO:0004871 GO:GO:0003690
GO:GO:0019896 GO:GO:0046982 GO:GO:0043627 GO:GO:0045906
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0071407
GO:GO:0035035 GO:GO:0034244 eggNOG:NOG289264 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 CTD:3091 KO:K08268 EMBL:Y09507
EMBL:AF057308 IPI:IPI00951313 PIR:JC5809 RefSeq:NP_077335.1
UniGene:Rn.10852 ProteinModelPortal:O35800 SMR:O35800
MINT:MINT-235713 STRING:O35800 PRIDE:O35800 GeneID:29560
KEGG:rno:29560 UCSC:RGD:61928 NextBio:609610 ArrayExpress:O35800
Genevestigator:O35800 GermOnline:ENSRNOG00000008292 Uniprot:O35800
Length = 825
Score = 218 (81.8 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 39/90 (43%), Positives = 62/90 (68%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D S + + G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 202 DTSSNQPQCGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 257
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ P+ + +S+++++HA DS H+
Sbjct: 258 RITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 6.6e-36, Sum P(2) = 6.6e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 37 (18.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 76 TPASNGSTLMEPQ--DNIENQSDNTRRGSAIQDKDDSE 111
+P S G + PQ D + SD + R S+ + SE
Sbjct: 480 SPESLGLSFTMPQIQDQPASPSDGSTRQSSPEPNSPSE 517
>UNIPROTKB|F1LT63 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:61928 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
IPI:IPI00339106 Ensembl:ENSRNOT00000012105 ArrayExpress:F1LT63
Uniprot:F1LT63
Length = 827
Score = 218 (81.8 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 39/90 (43%), Positives = 62/90 (68%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D S + + G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 191 DTSSNQPQCGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 246
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ P+ + +S+++++HA DS H+
Sbjct: 247 RITELMGYEPEELLGRSIYEYYHALDSDHL 276
Score = 208 (78.3 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 115 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 174
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 175 SATWKVLHCTGHI 187
>UNIPROTKB|D4A8P8 [details] [associations]
symbol:Hif1a "Hypoxia-inducible factor 1-alpha"
species:10116 "Rattus norvegicus" [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001922 "B-1 B cell homeostasis"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0002248 "connective tissue replacement involved in inflammatory
response wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006089 "lactate metabolic process"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0006879 "cellular iron ion homeostasis" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0010573 "vascular endothelial growth factor
production" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IEA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0014850 "response to muscle activity"
evidence=IEA] [GO:0019896 "axon transport of mitochondrion"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0021502 "neural fold elevation formation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030949 "positive regulation of vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032007
"negative regulation of TOR signaling cascade" evidence=IEA]
[GO:0032364 "oxygen homeostasis" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045648 "positive regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0061030 "epithelial
cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0071347 "cellular response
to interleukin-1" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:61928 GO:GO:0005737
GO:GO:0021987 GO:GO:0005730 GO:GO:0035774 GO:GO:0001755
GO:GO:0071542 GO:GO:0006110 GO:GO:0043565 GO:GO:0008542
GO:GO:0071456 GO:GO:0043524 GO:GO:0010575 GO:GO:0050790
GO:GO:0001525 GO:GO:0042593 GO:GO:0032007 GO:GO:0006879
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0001947
GO:GO:0014850 GO:GO:0001837 GO:GO:0030949 GO:GO:0071347
GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 GO:GO:0001892
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 GO:GO:0000988
GO:GO:0006089 GO:GO:0010870 GO:GO:0032364 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
OrthoDB:EOG40CHGP GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 IPI:IPI00557648
Ensembl:ENSRNOT00000049725 ArrayExpress:D4A8P8 Uniprot:D4A8P8
Length = 828
Score = 218 (81.8 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 39/90 (43%), Positives = 62/90 (68%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D S + + G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 203 DTSSNQPQCGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 258
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ P+ + +S+++++HA DS H+
Sbjct: 259 RITELMGYEPEELLGRSIYEYYHALDSDHL 288
Score = 208 (78.3 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 127 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 186
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 187 SATWKVLHCTGHI 199
Score = 37 (18.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 76 TPASNGSTLMEPQ--DNIENQSDNTRRGSAIQDKDDSE 111
+P S G + PQ D + SD + R S+ + SE
Sbjct: 483 SPESLGLSFTMPQIQDQPASPSDGSTRQSSPEPNSPSE 520
>UNIPROTKB|F8W9L0 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0000988 "protein binding transcription
factor activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001922 "B-1 B cell homeostasis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0002248
"connective tissue replacement involved in inflammatory response
wound healing" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=IEA] [GO:0006089 "lactate metabolic
process" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006879 "cellular iron ion homeostasis"
evidence=IEA] [GO:0007595 "lactation" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=IEA] [GO:0014850 "response to
muscle activity" evidence=IEA] [GO:0021502 "neural fold elevation
formation" evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0030949 "positive regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=IEA] [GO:0032007 "negative regulation of TOR signaling
cascade" evidence=IEA] [GO:0032364 "oxygen homeostasis"
evidence=IEA] [GO:0032963 "collagen metabolic process"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035774 "positive regulation of insulin secretion involved in
cellular response to glucose stimulus" evidence=IEA] [GO:0042541
"hemoglobin biosynthetic process" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=IEA]
[GO:0045926 "negative regulation of growth" evidence=IEA]
[GO:0046716 "muscle cell homeostasis" evidence=IEA] [GO:0048546
"digestive tract morphogenesis" evidence=IEA] [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0051541 "elastin
metabolic process" evidence=IEA] [GO:0060574 "intestinal epithelial
cell maturation" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0061298 "retina vasculature development in
camera-type eye" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987
GO:GO:0005730 GO:GO:0035774 GO:GO:0032869 GO:GO:0001755
GO:GO:0071542 GO:GO:0006110 GO:GO:0009749 GO:GO:0043565
GO:GO:0001666 GO:GO:0048661 GO:GO:0008542 GO:GO:0043524
GO:GO:0050790 GO:GO:0001525 GO:GO:0042593 GO:GO:0032007
GO:GO:0006879 GO:GO:0001077 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0045648 GO:GO:0061298
GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001947
GO:GO:0014850 GO:GO:0001837 GO:GO:0030949 GO:GO:0003151
GO:GO:0007595 GO:GO:0010634 GO:GO:0001892 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0032364
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GO:GO:0061030 GO:GO:0003208 EMBL:AL137129 HGNC:HGNC:4910
ChiTaRS:HIF1A GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
ProteinModelPortal:F8W9L0 SMR:F8W9L0 Ensembl:ENST00000557538
ArrayExpress:F8W9L0 Bgee:F8W9L0 Uniprot:F8W9L0
Length = 767
Score = 217 (81.4 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFT 162
+ D + ++P+ G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+
Sbjct: 141 VYDTNSNQPQ--CGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFS 194
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 195 YCDERITELMGYEPEELLGRSIYEYYHALDSDHL 228
Score = 208 (78.3 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 67 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 126
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 127 SATWKVLHCTGHI 139
Score = 37 (18.1 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 431 TMPQIQDQTPSPSDGSTRQSSPEPNSPSE 459
>UNIPROTKB|Q309Z6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:146132 "Eospalax baileyi" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ229099
ProteinModelPortal:Q309Z6 SMR:Q309Z6 Uniprot:Q309Z6
Length = 819
Score = 217 (81.4 bits), Expect = 8.3e-36, Sum P(2) = 8.3e-36
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFT 162
+ D + ++P+ G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+
Sbjct: 201 VYDTNSNQPQ--CGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFS 254
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 255 YCDERITELMGYEPEELLGRSIYEYYHALDSDHL 288
Score = 208 (78.3 bits), Expect = 8.3e-36, Sum P(2) = 8.3e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 127 ELTGHSVFDFTHPCDHEEMREMLTHRNGPIKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 186
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 187 SATWKVLHCTGHI 199
Score = 35 (17.4 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 101 GSAIQDKDDSEPEEEVGEKR 120
G+ +Q DD P + KR
Sbjct: 728 GTLLQQPDDRAPATSLSWKR 747
Score = 35 (17.4 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 491 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 519
>UNIPROTKB|Q16665 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001922 "B-1 B cell homeostasis" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003151
"outflow tract morphogenesis" evidence=IEA] [GO:0003208 "cardiac
ventricle morphogenesis" evidence=IEA] [GO:0006089 "lactate
metabolic process" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0007595 "lactation" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0014850 "response
to muscle activity" evidence=IEA] [GO:0021502 "neural fold
elevation formation" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0032007 "negative regulation of
TOR signaling cascade" evidence=IEA] [GO:0035162 "embryonic
hemopoiesis" evidence=IEA] [GO:0035774 "positive regulation of
insulin secretion involved in cellular response to glucose
stimulus" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0045926 "negative regulation of growth"
evidence=IEA] [GO:0046716 "muscle cell homeostasis" evidence=IEA]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060574
"intestinal epithelial cell maturation" evidence=IEA] [GO:0061030
"epithelial cell differentiation involved in mammary gland alveolus
development" evidence=IEA] [GO:0061298 "retina vasculature
development in camera-type eye" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:2001054
"negative regulation of mesenchymal cell apoptotic process"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=TAS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;TAS]
[GO:0035035 "histone acetyltransferase binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0071456 "cellular response to
hypoxia" evidence=IEP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0019896 "axon transport of
mitochondrion" evidence=IMP] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0032364 "oxygen
homeostasis" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=TAS]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IDA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IMP] [GO:0051879 "Hsp90 protein binding" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=TAS] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=TAS] [GO:0001938 "positive regulation
of endothelial cell proliferation" evidence=IC] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IDA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IC]
[GO:0045766 "positive regulation of angiogenesis" evidence=IC]
[GO:0045821 "positive regulation of glycolysis" evidence=IC]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=IDA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IC] [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISS] [GO:0002248 "connective
tissue replacement involved in inflammatory response wound healing"
evidence=ISS] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=ISS] [GO:0032963 "collagen metabolic process"
evidence=ISS] [GO:0051541 "elastin metabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0070101 "positive
regulation of chemokine-mediated signaling pathway" evidence=IC]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0071347 "cellular response to interleukin-1"
evidence=IEP] [GO:0010573 "vascular endothelial growth factor
production" evidence=IDA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IDA;IMP] [GO:0000988 "protein binding
transcription factor activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0032869 GO:GO:0003677 GO:GO:0001755
GO:GO:0001938 GO:GO:0051000 GO:GO:0071542
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0043565
GO:GO:0048661 GO:GO:0008542 GO:GO:0007219 GO:GO:0043524
GO:GO:0032722 GO:GO:0010575 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 GO:GO:0045766 GO:GO:0042593 GO:GO:0032007
GO:GO:0045821 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 Pathway_Interaction_DB:pdgfrbpathway
GO:GO:0004871 GO:GO:0046716 GO:GO:0009434 GO:GO:0045926
GO:GO:0019896 GO:GO:0045648 GO:GO:0061298 GO:GO:0051216
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0001947 GO:GO:0051879 GO:GO:0014850
Pathway_Interaction_DB:vegfr1_2_pathway
Pathway_Interaction_DB:vegfr1_pathway GO:GO:0001837 GO:GO:0030949
GO:GO:0071347 GO:GO:0003151 GO:GO:0007595 GO:GO:0010634 PDB:1D7G
PDB:4H6J PDBsum:1D7G PDBsum:4H6J
Pathway_Interaction_DB:hif1apathway GO:GO:0001892 GO:GO:0042789
GO:GO:0046886 GO:GO:0043619 GO:GO:0002052 GO:GO:0035162
GO:GO:0048546 GO:GO:0030502 GO:GO:0042541 PDB:1L8C PDBsum:1L8C
GO:GO:0000988 GO:GO:0006089 GO:GO:0010870 GO:GO:0070101 PDB:3HQR
PDB:3HQU PDBsum:3HQR PDBsum:3HQU GO:GO:0032364 PDB:1LM8 PDB:1LQB
PDB:4AJY PDBsum:1LM8 PDBsum:1LQB PDBsum:4AJY PDB:1L3E PDBsum:1L3E
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GO:GO:0061030 GO:GO:0003208 OrthoDB:EOG40CHGP CTD:3091 KO:K08268
EMBL:U22431 EMBL:U29165 EMBL:AF050127 EMBL:AF050115 EMBL:AF050116
EMBL:AF050117 EMBL:AF050118 EMBL:AF050119 EMBL:AF050120
EMBL:AF050121 EMBL:AF050122 EMBL:AF050123 EMBL:AF050124
EMBL:AF050125 EMBL:AF050126 EMBL:FJ790247 EMBL:AF207601
EMBL:AF207602 EMBL:AF208487 EMBL:AF304431 EMBL:AB073325
EMBL:BT009776 EMBL:AL137129 EMBL:BC012527 IPI:IPI00003442
IPI:IPI00332963 IPI:IPI00788876 PIR:I38972 RefSeq:NP_001230013.1
RefSeq:NP_001521.1 RefSeq:NP_851397.1 UniGene:Hs.597216
UniGene:Hs.719495 PDB:1H2K PDB:1H2L PDB:1H2M PDB:2ILM PDBsum:1H2K
PDBsum:1H2L PDBsum:1H2M PDBsum:2ILM DisProt:DP00262
ProteinModelPortal:Q16665 SMR:Q16665 DIP:DIP-29722N IntAct:Q16665
MINT:MINT-133270 STRING:Q16665 PhosphoSite:Q16665 DMDM:2498017
PaxDb:Q16665 PRIDE:Q16665 DNASU:3091 Ensembl:ENST00000323441
Ensembl:ENST00000337138 Ensembl:ENST00000539097 GeneID:3091
KEGG:hsa:3091 UCSC:uc001xfq.2 GeneCards:GC14P062162 HGNC:HGNC:4910
HPA:CAB017442 HPA:HPA001275 MIM:603348 neXtProt:NX_Q16665
PharmGKB:PA29283 OMA:QNAQRKR PhylomeDB:Q16665 BindingDB:Q16665
ChEMBL:CHEMBL4261 ChiTaRS:HIF1A EvolutionaryTrace:Q16665
GenomeRNAi:3091 NextBio:12265 ArrayExpress:Q16665 Bgee:Q16665
CleanEx:HS_HIF1A Genevestigator:Q16665 GermOnline:ENSG00000100644
GO:GO:0001922 GO:GO:0032963 GO:GO:0002248 GO:GO:0051541
GO:GO:0060574 GO:GO:2001054 GO:GO:0021502 GO:GO:0061419
GO:GO:0032909 GO:GO:0010573 Uniprot:Q16665
Length = 826
Score = 217 (81.4 bits), Expect = 8.5e-36, Sum P(2) = 8.5e-36
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFT 162
+ D + ++P+ G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+
Sbjct: 200 VYDTNSNQPQ--CGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFS 253
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 254 YCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 8.5e-36, Sum P(2) = 8.5e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 37 (18.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQTPSPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|A8MYV6 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1, alpha subunit
(Basic helix-loop-helix transcription factor), isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005730
EMBL:CH471061 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AL137129 IPI:IPI00788876
UniGene:Hs.597216 UniGene:Hs.719495 HGNC:HGNC:4910 ChiTaRS:HIF1A
SMR:A8MYV6 STRING:A8MYV6 Ensembl:ENST00000394997 UCSC:uc001xfs.2
Uniprot:A8MYV6
Length = 827
Score = 217 (81.4 bits), Expect = 8.5e-36, Sum P(2) = 8.5e-36
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFT 162
+ D + ++P+ G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+
Sbjct: 201 VYDTNSNQPQ--CGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFS 254
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 255 YCDERITELMGYEPEELLGRSIYEYYHALDSDHL 288
Score = 208 (78.3 bits), Expect = 8.5e-36, Sum P(2) = 8.5e-36
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 127 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 186
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 187 SATWKVLHCTGHI 199
Score = 37 (18.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 491 TMPQIQDQTPSPSDGSTRQSSPEPNSPSE 519
>UNIPROTKB|Q7YSE5 [details] [associations]
symbol:Q7YSE5 "Hypoxia inducible factor 1 alpha subunit"
species:9986 "Oryctolagus cuniculus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
OrthoDB:EOG40CHGP CTD:3091 EMBL:AY273790 RefSeq:NP_001076251.1
UniGene:Ocu.3329 HSSP:Q16665 ProteinModelPortal:Q7YSE5 SMR:Q7YSE5
STRING:Q7YSE5 GeneID:100009579 Uniprot:Q7YSE5
Length = 819
Score = 216 (81.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 38/90 (42%), Positives = 62/90 (68%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D + + + G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 202 DTNSNQSQCGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 257
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ P+ + +S+++++HA DS H+
Sbjct: 258 RITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
>UNIPROTKB|Q64F54 [details] [associations]
symbol:Q64F54 "Hypoxia-inducible factor 1 alpha subunit"
species:43179 "Spermophilus tridecemlineatus" [GO:0001666 "response
to hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY713478 ProteinModelPortal:Q64F54
SMR:Q64F54 Uniprot:Q64F54
Length = 821
Score = 216 (81.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 38/90 (42%), Positives = 62/90 (68%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D + + + G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 202 DTNSNQSQCGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 257
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ P+ + +S+++++HA DS H+
Sbjct: 258 RITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|Q4ZH58 [details] [associations]
symbol:Q4ZH58 "Hypoxia-inducible factor 1 alpha"
species:64717 "Microtus oeconomus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:DQ010149 ProteinModelPortal:Q4ZH58
SMR:Q4ZH58 Uniprot:Q4ZH58
Length = 828
Score = 216 (81.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 38/90 (42%), Positives = 62/90 (68%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D + + + G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+Y DE
Sbjct: 202 DTNSNQSQCGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 257
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ P+ + +S+++++HA DS H+
Sbjct: 258 RITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>ZFIN|ZDB-GENE-060607-11 [details] [associations]
symbol:epas1b "endothelial PAS domain protein 1b"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-060607-11 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0051402 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
OrthoDB:EOG4XPQF6 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 GeneTree:ENSGT00650000093281
EMBL:BX248102 EMBL:BC163440 IPI:IPI00742526 UniGene:Dr.83091
STRING:B3DJD1 Ensembl:ENSDART00000080382 OMA:YNSCPPR Uniprot:B3DJD1
Length = 834
Score = 210 (79.0 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 39/83 (46%), Positives = 59/83 (71%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+V+L G SI++ THPCDH E++ LS +++ +R F+R+KCT+T++GR VN
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKAGIGKKGKELSTERDFFMRMKCTVTNRGRTVN 182
Query: 57 VKAATYKVIHCTGHL-VQNQTPA 78
+K+A++KV+HCTGHL V N PA
Sbjct: 183 LKSASWKVLHCTGHLKVCNGCPA 205
Score = 209 (78.6 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 35/80 (43%), Positives = 57/80 (71%)
Query: 126 PSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V + EPI HP+N D PL S+TFL++HS+DMK+TY DE + + +G+NP+ + +S
Sbjct: 215 PLTCVVMMCEPIVHPSNIDTPLDSKTFLSRHSMDMKYTYCDERVTELMGYNPEDLLGRSA 274
Query: 185 FDFHHAQDSFHIQNAFKNPC 204
++F+HA D+ ++ + +N C
Sbjct: 275 YEFYHALDAENVTKSHQNLC 294
>UNIPROTKB|Q6H8T3 [details] [associations]
symbol:hif-1a "Hypoxia inducible factor 1 alpha"
species:134510 "Nannospalax judaei" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AJ715791 ProteinModelPortal:Q6H8T3
SMR:Q6H8T3 Uniprot:Q6H8T3
Length = 824
Score = 217 (81.4 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFT 162
+ D + ++P+ G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+
Sbjct: 200 VYDTNSNQPQ--CGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFS 253
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 254 YCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 201 (75.8 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 34/73 (46%), Positives = 53/73 (72%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVKEGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTG +
Sbjct: 186 SATWKVLHCTGRI 198
Score = 35 (17.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 101 GSAIQDKDDSEPEEEVGEKR 120
G+ +Q DD P + KR
Sbjct: 733 GTLLQQPDDRAPATSLSWKR 752
Score = 35 (17.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|Q4R658 [details] [associations]
symbol:Q4R658 "Testis cDNA, clone: QtsA-19088, similar to
human hypoxia-inducible factor 1, alpha subunit
(basichelix-loop-helix transcription factor) (HIF1A),transcript
variant 1," species:9541 "Macaca fascicularis" [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0035035 "histone acetyltransferase binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
EMBL:AB169332 ProteinModelPortal:Q4R658 SMR:Q4R658 Uniprot:Q4R658
Length = 826
Score = 217 (81.4 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 39/94 (41%), Positives = 65/94 (69%)
Query: 104 IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFT 162
+ D + ++P+ G K+ P C V I EPIPHP+N ++PL S+TFL++HSLDMKF+
Sbjct: 200 VYDTNSNQPQ--CGYKK----PPMTCLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFS 253
Query: 163 YADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 254 YCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 201 (75.8 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
Identities = 34/73 (46%), Positives = 54/73 (73%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPC H E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCGHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPPSPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|Q99814 [details] [associations]
symbol:EPAS1 "Endothelial PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0002027 "regulation of heart rate" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0042415 "norepinephrine metabolic process" evidence=IEA]
[GO:0043129 "surfactant homeostasis" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0033554 "cellular response to stress" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0071456 "cellular response
to hypoxia" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048625 "myoblast cell fate commitment"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0007165 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0006366 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 Pathway_Interaction_DB:vegfr1_2_pathway GO:GO:0002027
PDB:2A24 PDB:3F1N PDB:3F1O PDB:3F1P PDB:3H7W PDB:3H82 PDBsum:2A24
PDBsum:3F1N PDBsum:3F1O PDBsum:3F1P PDBsum:3H7W PDBsum:3H82
GO:GO:0001892 GO:GO:0061418 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 Orphanet:247511 EMBL:U81984 EMBL:U51626
EMBL:BC051338 IPI:IPI00294084 RefSeq:NP_001421.2 UniGene:Hs.468410
PDB:1P97 PDBsum:1P97 ProteinModelPortal:Q99814 SMR:Q99814
DIP:DIP-32857N IntAct:Q99814 MINT:MINT-1199606 STRING:Q99814
PhosphoSite:Q99814 DMDM:32470617 PRIDE:Q99814
Ensembl:ENST00000263734 GeneID:2034 KEGG:hsa:2034 UCSC:uc002ruv.3
CTD:2034 GeneCards:GC02P046436 HGNC:HGNC:3374 HPA:CAB012248
MIM:603349 MIM:611783 neXtProt:NX_Q99814 PharmGKB:PA27809
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InParanoid:Q99814 KO:K09095 OMA:QYQDYSL OrthoDB:EOG4XPQF6
PhylomeDB:Q99814 BindingDB:Q99814 ChEMBL:CHEMBL1744522
ChiTaRS:EPAS1 EvolutionaryTrace:Q99814 GenomeRNAi:2034 NextBio:8255
ArrayExpress:Q99814 Bgee:Q99814 CleanEx:HS_EPAS1
Genevestigator:Q99814 GermOnline:ENSG00000116016 GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
Uniprot:Q99814
Length = 870
Score = 210 (79.0 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 39/87 (44%), Positives = 60/87 (68%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS + ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASN 80
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHN 209
Score = 201 (75.8 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 32/77 (41%), Positives = 57/77 (74%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F
Sbjct: 221 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEF 280
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 281 YHALDSENMTKSHQNLC 297
Score = 38 (18.4 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 112 PEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTK--HSLDMKFT 162
PEE + + T P HCF A+ I P P S L K L+ K T
Sbjct: 547 PEERLLAENPQST-PQHCFSAMTN-IFQPLAPVAPHSPFLLDKFQQQLESKKT 597
>UNIPROTKB|F1S5K9 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CU570958
Ensembl:ENSSSCT00000009245 Uniprot:F1S5K9
Length = 863
Score = 206 (77.6 bits), Expect = 7.9e-34, Sum P(2) = 7.9e-34
Identities = 38/84 (45%), Positives = 59/84 (70%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS + ++D+ +R F+R+KCT+T++GR
Sbjct: 115 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 174
Query: 55 VNVKAATYKVIHCTGHL-VQNQTP 77
VN+K+AT+KV+HCTG + V N P
Sbjct: 175 VNLKSATWKVLHCTGQVKVYNNCP 198
Score = 201 (75.8 bits), Expect = 7.9e-34, Sum P(2) = 7.9e-34
Identities = 32/77 (41%), Positives = 57/77 (74%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F
Sbjct: 213 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEF 272
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 273 YHALDSENMTKSHQNLC 289
>UNIPROTKB|F1NG41 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0001974 "blood vessel
remodeling" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0042415
"norepinephrine metabolic process" evidence=IEA] [GO:0043129
"surfactant homeostasis" evidence=IEA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0048625 "myoblast cell fate
commitment" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0005667 GO:GO:0001077 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0043619 GO:GO:0042415 OMA:QYQDYSL InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:AADN02011973 IPI:IPI00572997
Ensembl:ENSGALT00000016253 ArrayExpress:F1NG41 Uniprot:F1NG41
Length = 859
Score = 205 (77.2 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 36/94 (38%), Positives = 63/94 (67%)
Query: 112 PEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMED 170
P G K ++T C + + EPI HP+N D+PL S+TF+++HS+DMKFTY D+ + +
Sbjct: 199 PHTLCGYKEPLLT----CLIIMCEPIQHPSNIDIPLDSKTFMSRHSMDMKFTYCDDRITE 254
Query: 171 FLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKNPC 204
+G++P+ + +S ++F+HA DS ++ + +N C
Sbjct: 255 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLC 288
Score = 201 (75.8 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 39/94 (41%), Positives = 60/94 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS + +++ +R F+R+KCT+T++GR
Sbjct: 115 QVELTGHSIFDFTHPCDHEEIRENLSLKNGPGFGKKNKEMSTERDFFMRMKCTVTNRGRT 174
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASNGSTLMEP 87
VN+K+AT+KV+HCTG + V N P EP
Sbjct: 175 VNLKSATWKVLHCTGQVKVYNTCPPHTLCGYKEP 208
>UNIPROTKB|E2QUK0 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043129
"surfactant homeostasis" evidence=IEA] [GO:0042415 "norepinephrine
metabolic process" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0030218 "erythrocyte
differentiation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0030324 GO:GO:0007601 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:AAEX03007490
Ensembl:ENSCAFT00000004132 Uniprot:E2QUK0
Length = 869
Score = 206 (77.6 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 41/95 (43%), Positives = 63/95 (66%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKSGPGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPA-SNGSTLMEP 87
VN+K+AT+KV+HCTG + V N P S+ + EP
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHSSLCSYKEP 217
Score = 200 (75.5 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 32/77 (41%), Positives = 57/77 (74%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F
Sbjct: 221 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELVGYHPEELLGRSAYEF 280
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 281 YHALDSENMTKSHQNLC 297
>UNIPROTKB|A5PJT1 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 HOGENOM:HOG000234306 HOVERGEN:HBG060456 OMA:QYQDYSL
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 EMBL:DAAA02030718
EMBL:DAAA02030719 EMBL:BC142229 IPI:IPI00718553 UniGene:Bt.45570
SMR:A5PJT1 STRING:A5PJT1 Ensembl:ENSBTAT00000004836
InParanoid:A5PJT1 Uniprot:A5PJT1
Length = 870
Score = 206 (77.6 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 38/84 (45%), Positives = 59/84 (70%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS + ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTP 77
VN+K+AT+KV+HCTG + V N P
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCP 206
Score = 198 (74.8 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 32/77 (41%), Positives = 56/77 (72%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P + +S ++F
Sbjct: 221 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELVGYHPQELLGRSAYEF 280
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 281 YHALDSENMTKSHQNLC 297
>MGI|MGI:109169 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10090
"Mus musculus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=ISO;IMP] [GO:0001892 "embryonic
placenta development" evidence=IGI] [GO:0001974 "blood vessel
remodeling" evidence=IMP] [GO:0002027 "regulation of heart rate"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IGI;ISO;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IGI;IMP]
[GO:0007005 "mitochondrion organization" evidence=IMP] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007601 "visual
perception" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO;IPI] [GO:0030097 "hemopoiesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IGI] [GO:0030218
"erythrocyte differentiation" evidence=IMP] [GO:0030324 "lung
development" evidence=IMP] [GO:0035035 "histone acetyltransferase
binding" evidence=ISO] [GO:0042415 "norepinephrine metabolic
process" evidence=IMP] [GO:0043129 "surfactant homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IGI;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IPI] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048469 "cell maturation" evidence=IMP]
[GO:0048625 "myoblast cell fate commitment" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109169
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0001666 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0035035 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OMA:QYQDYSL
OrthoDB:EOG4XPQF6 ChiTaRS:EPAS1 GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:U81983
EMBL:D89787 EMBL:AF045160 IPI:IPI00312615 RefSeq:NP_034267.3
UniGene:Mm.1415 ProteinModelPortal:P97481 SMR:P97481 DIP:DIP-46109N
STRING:P97481 PhosphoSite:P97481 PRIDE:P97481
Ensembl:ENSMUST00000024954 GeneID:13819 KEGG:mmu:13819
UCSC:uc008duj.2 GeneTree:ENSGT00650000093281 InParanoid:P97481
NextBio:284608 Bgee:P97481 CleanEx:MM_EPAS1 Genevestigator:P97481
GermOnline:ENSMUSG00000024140 Uniprot:P97481
Length = 874
Score = 205 (77.2 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 37/84 (44%), Positives = 59/84 (70%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ + ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTP 77
VN+K+AT+KV+HCTG + V N P
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP 206
Score = 199 (75.1 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 32/77 (41%), Positives = 57/77 (74%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F
Sbjct: 221 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLGRSAYEF 280
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 281 YHALDSENMTKSHQNLC 297
>ZFIN|ZDB-GENE-030131-4490 [details] [associations]
symbol:epas1a "endothelial PAS domain protein 1a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-030131-4490 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CR931998 IPI:IPI00499388
Ensembl:ENSDART00000024415 ArrayExpress:E7FAJ1 Bgee:E7FAJ1
Uniprot:E7FAJ1
Length = 842
Score = 198 (74.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 126 PSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C + PIPHP+N D PL S+TF+++HS+DMKF Y DE + +G+ P+ + +SV
Sbjct: 217 PLTCITMLCAPIPHPSNVDTPLDSKTFMSRHSMDMKFIYCDERVSSLIGYRPEELLGRSV 276
Query: 185 FDFHHAQDSFHIQNAFKNPC 204
++F HA DS ++ + +N C
Sbjct: 277 YEFCHALDSENMTKSHQNLC 296
Score = 197 (74.4 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS +++ R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSIKSGPVYGRKGKEMSTSRDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL 71
VN+K+A++KV+HCTGHL
Sbjct: 183 VNLKSASWKVLHCTGHL 199
>RGD|68404 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0001666 "response to hypoxia" evidence=ISO;IDA;TAS] [GO:0001892
"embryonic placenta development" evidence=ISO] [GO:0001974 "blood
vessel remodeling" evidence=ISO] [GO:0002027 "regulation of heart
rate" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=ISO] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030154
"cell differentiation" evidence=IEA;ISO] [GO:0030218 "erythrocyte
differentiation" evidence=ISO] [GO:0030324 "lung development"
evidence=ISO] [GO:0035035 "histone acetyltransferase binding"
evidence=ISO] [GO:0042415 "norepinephrine metabolic process"
evidence=ISO] [GO:0043129 "surfactant homeostasis" evidence=ISO]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048469 "cell maturation" evidence=ISO]
[GO:0048625 "myoblast cell fate commitment" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:68404 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0030324 GO:GO:0007601 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 198 (74.8 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 32/77 (41%), Positives = 57/77 (74%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F
Sbjct: 221 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELVGYHPEELLGRSAYEF 280
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 281 YHALDSENMTKSHQNLC 297
Score = 197 (74.4 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ +D +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKTGSGFGKKNKDRSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTP 77
VN+K+AT+KV+HCTG + V N P
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP 206
>UNIPROTKB|Q9JHS1 [details] [associations]
symbol:Epas1 "Endothelial PAS domain-containing protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:68404 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0001666 GO:GO:0045944 GO:GO:0003700 GO:GO:0001525
GO:GO:0005667 GO:GO:0001077 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 GO:GO:0002027 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 198 (74.8 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 32/77 (41%), Positives = 57/77 (74%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDF 187
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+ + + +G++P+ + +S ++F
Sbjct: 221 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELVGYHPEELLGRSAYEF 280
Query: 188 HHAQDSFHIQNAFKNPC 204
+HA DS ++ + +N C
Sbjct: 281 YHALDSENMTKSHQNLC 297
Score = 197 (74.4 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-------ANHTEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ L+ +D +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLTLKTGSGFGKKNKDRSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTP 77
VN+K+AT+KV+HCTG + V N P
Sbjct: 183 VNLKSATWKVLHCTGQVRVYNNCP 206
>ZFIN|ZDB-GENE-080917-55 [details] [associations]
symbol:hif1aa "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-080917-55 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:BX649520 IPI:IPI00506879
Ensembl:ENSDART00000044282 Bgee:F1QNB9 Uniprot:F1QNB9
Length = 760
Score = 200 (75.5 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 117 GEKRRVVTEPSHC---FVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFL 172
G ++ V E + C V I E IPHPAN + PL S+TFL++H+LDM+FTY DE + + L
Sbjct: 203 GVEKEVCEEKNTCSTYLVLICESIPHPANIEAPLDSRTFLSRHTLDMRFTYCDERITELL 262
Query: 173 GFNPDIFIAKSVFDFHHAQDSFHI 196
GF+P+ + SV++++HA DS H+
Sbjct: 263 GFDPEDVLQHSVYEYYHALDSDHM 286
Score = 190 (71.9 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS------ANHTEDIRAQRSVFIRLKCTLTSKGRNV 55
+++L G S++E THPCDH E++ +L+ + ++D RS +R+KCTLTS+GR V
Sbjct: 123 QIELTGHSVFEFTHPCDHEELREMLAHRFGSLSKKSKDQNTNRSFLLRMKCTLTSRGRTV 182
Query: 56 NVKAATYKVIHCTGHL 71
NVK+A++KV+ C+G +
Sbjct: 183 NVKSASWKVLRCSGRI 198
>UNIPROTKB|C9J9N2 [details] [associations]
symbol:EPAS1 "Endothelial PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0002027 "regulation of heart rate" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0042415 "norepinephrine metabolic process" evidence=IEA]
[GO:0043129 "surfactant homeostasis" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0048625 "myoblast cell fate
commitment" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0030324 GO:GO:0007601 GO:GO:0043565
GO:GO:0001666 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027 GO:GO:0001892
GO:GO:0043619 GO:GO:0042415 GO:GO:0048469 GO:GO:0043129
HGNC:HGNC:3374 ChiTaRS:EPAS1 GO:GO:0048625 HOGENOM:HOG000236298
EMBL:AC016696 EMBL:AC016912 IPI:IPI00917611
ProteinModelPortal:C9J9N2 SMR:C9J9N2 STRING:C9J9N2
Ensembl:ENST00000449347 ArrayExpress:C9J9N2 Bgee:C9J9N2
Uniprot:C9J9N2
Length = 259
Score = 210 (79.0 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 39/87 (44%), Positives = 60/87 (68%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH-------TEDIRAQRSVFIRLKCTLTSKGRN 54
+V+L G SI++ THPCDH E++ LS + ++D+ +R F+R+KCT+T++GR
Sbjct: 123 QVELTGHSIFDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRT 182
Query: 55 VNVKAATYKVIHCTGHL-VQNQTPASN 80
VN+K+AT+KV+HCTG + V N P N
Sbjct: 183 VNLKSATWKVLHCTGQVKVYNNCPPHN 209
Score = 130 (50.8 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 22/39 (56%), Positives = 32/39 (82%)
Query: 129 CFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
C + + EPI HP++ D+PL S+TFL++HS+DMKFTY D+
Sbjct: 221 CLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDD 259
>ZFIN|ZDB-GENE-040426-1315 [details] [associations]
symbol:hif1al "hypoxia-inducible factor 1, alpha
subunit, like" species:7955 "Danio rerio" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-1315 GO:GO:0005737 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR021537 Pfam:PF11413 EMBL:AY330295
IPI:IPI00960923 UniGene:Dr.11978 ProteinModelPortal:Q6EGR9
InParanoid:Q6EGR9 ArrayExpress:Q6EGR9 Uniprot:Q6EGR9
Length = 626
Score = 192 (72.6 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 33/72 (45%), Positives = 52/72 (72%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANH--TEDIRAQRSVFIRLKCTLTSKGRNVNVKA 59
+++L+GQS+YE HPCD E++ IL+ ++ + + F+R+K TLT GR VN+K+
Sbjct: 121 QLELLGQSVYEFVHPCDQEELRDILATRPGVSKKKTMEHNFFLRMKSTLTHTGRTVNIKS 180
Query: 60 ATYKVIHCTGHL 71
AT+KV+HCTGH+
Sbjct: 181 ATWKVLHCTGHM 192
Score = 166 (63.5 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 135 EPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDS 193
EPIPHP++ + PL S TFLT+H+LD+ +T D + + +G+ PD I +S F+F HA D
Sbjct: 214 EPIPHPSSVEFPLDSSTFLTRHNLDLTYTQCDGRVTELVGYQPDDLIGRSAFEFFHALDF 273
Query: 194 FHIQNA 199
H+ +
Sbjct: 274 DHVSRS 279
>MGI|MGI:1859778 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IPI] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IC] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IPI]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1859778 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006366
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
EMBL:AC148976 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AF060194 EMBL:AH008971
EMBL:AF416641 EMBL:BC120587 EMBL:AK144472 IPI:IPI00131181
IPI:IPI00621179 RefSeq:NP_058564.2 UniGene:Mm.135110
ProteinModelPortal:Q0VBL6 SMR:Q0VBL6 STRING:Q0VBL6
PhosphoSite:Q0VBL6 PRIDE:Q0VBL6 Ensembl:ENSMUST00000037762
GeneID:53417 KEGG:mmu:53417 UCSC:uc009fir.2 UCSC:uc009fit.2
OrthoDB:EOG4BVRT7 NextBio:310241 Bgee:Q0VBL6 CleanEx:MM_HIF3A
Genevestigator:Q0VBL6 Uniprot:Q0VBL6
Length = 662
Score = 178 (67.7 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++PD I S
Sbjct: 213 PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSA 272
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 273 YEYIHALDS 281
Score = 176 (67.0 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 37/94 (39%), Positives = 59/94 (62%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT---EDIRA--QRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + A +R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV+HC+GH+ + PA GS EP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEP 212
>RGD|70332 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEA;ISO;TAS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:70332
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AJ277827
IPI:IPI00199807 RefSeq:NP_071973.1 UniGene:Rn.161814
ProteinModelPortal:Q9JHS2 STRING:Q9JHS2 PhosphoSite:Q9JHS2
PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345 UCSC:RGD:70332
InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 178 (67.7 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++PD I S
Sbjct: 213 PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSA 272
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 273 YEYIHALDS 281
Score = 173 (66.0 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKSEAATGRHFSLRMKSTLTSRGRALN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV+HC+GH+ + PA GS EP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEP 212
>UNIPROTKB|Q9JHS2 [details] [associations]
symbol:Hif3a "Hypoxia-inducible factor 3-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:70332 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 HSSP:Q99814 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 CTD:64344 eggNOG:NOG288942
KO:K09096 EMBL:AJ277827 IPI:IPI00199807 RefSeq:NP_071973.1
UniGene:Rn.161814 ProteinModelPortal:Q9JHS2 STRING:Q9JHS2
PhosphoSite:Q9JHS2 PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345
UCSC:RGD:70332 InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 178 (67.7 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHPA+ + PL + FL++HSLDMKFTY DE + + G++PD I S
Sbjct: 213 PLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSA 272
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 273 YEYIHALDS 281
Score = 173 (66.0 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + R +R+K TLTS+GR +N
Sbjct: 119 QLELIGHSIFDFIHPCDQEELQDALTPRPSLSKKKSEAATGRHFSLRMKSTLTSRGRALN 178
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV+HC+GH+ + PA GS EP
Sbjct: 179 LKAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEP 212
>UNIPROTKB|F1RM22 [details] [associations]
symbol:HIF3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0005667 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
OMA:APILDGT EMBL:FP565329 Ensembl:ENSSSCT00000003440 Uniprot:F1RM22
Length = 670
Score = 180 (68.4 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ + + +R +R+K TLTS+GR +N
Sbjct: 120 QLELIGHSIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN 179
Query: 57 VKAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIE 92
+KAAT+KV+HC+GH+ + P S S P N+E
Sbjct: 180 LKAATWKVLHCSGHM-RAYKPPSQTSPAGSPGPNLE 214
Score = 171 (65.3 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G+ PD I S
Sbjct: 216 PLQCLVLICEAIPHPDSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYRPDDLIGCSA 275
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 276 YEYIHALDS 284
>UNIPROTKB|H0YDZ5 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 EMBL:AC007193 HGNC:HGNC:15825
Ensembl:ENST00000472815 Uniprot:H0YDZ5
Length = 492
Score = 174 (66.3 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 94 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 153
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV++C+GH+ + PA GS EP
Sbjct: 154 LKAATWKVLNCSGHMRAYKPPAQTSPAGSPDSEP 187
Score = 171 (65.3 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++PD I S
Sbjct: 188 PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSA 247
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 248 YEYIHALDS 256
Score = 35 (17.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 67 CTGHLVQNQTPASNGSTLMEP 87
CT L + +PA++ T P
Sbjct: 56 CTSWLTRCPSPAASAPTWTRP 76
>UNIPROTKB|F5H884 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 InterPro:IPR021537 Pfam:PF11413
EMBL:AC007193 HGNC:HGNC:15825 IPI:IPI00908806
ProteinModelPortal:F5H884 SMR:F5H884 Ensembl:ENST00000420102
UCSC:uc010xxz.2 ArrayExpress:F5H884 Bgee:F5H884 Uniprot:F5H884
Length = 612
Score = 174 (66.3 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 70 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 129
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV++C+GH+ + PA GS EP
Sbjct: 130 LKAATWKVLNCSGHMRAYKPPAQTSPAGSPDSEP 163
Score = 171 (65.3 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++PD I S
Sbjct: 164 PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSA 223
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 224 YEYIHALDS 232
Score = 35 (17.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 67 CTGHLVQNQTPASNGSTLMEP 87
CT L + +PA++ T P
Sbjct: 32 CTSWLTRCPSPAASAPTWTRP 52
>UNIPROTKB|E9PB04 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0045944
GO:GO:0003700 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 InterPro:IPR021537 Pfam:PF11413 EMBL:AC007193
HGNC:HGNC:15825 IPI:IPI01008729 ProteinModelPortal:E9PB04
SMR:E9PB04 Ensembl:ENST00000339613 ArrayExpress:E9PB04 Bgee:E9PB04
Uniprot:E9PB04
Length = 613
Score = 174 (66.3 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 65 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 124
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV++C+GH+ + PA GS EP
Sbjct: 125 LKAATWKVLNCSGHMRAYKPPAQTSPAGSPDSEP 158
Score = 171 (65.3 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++PD I S
Sbjct: 159 PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSA 218
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 219 YEYIHALDS 227
>UNIPROTKB|A7Z028 [details] [associations]
symbol:HIF3A "HIF3A protein" species:9913 "Bos taurus"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0001666 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 GeneTree:ENSGT00650000093281 CTD:64344
eggNOG:NOG288942 KO:K09096 OrthoDB:EOG4BVRT7 EMBL:DAAA02047392
EMBL:BC153226 IPI:IPI00695039 RefSeq:NP_001098812.1
UniGene:Bt.43927 Ensembl:ENSBTAT00000025217 GeneID:507699
KEGG:bta:507699 InParanoid:A7Z028 OMA:APILDGT NextBio:20868183
Uniprot:A7Z028
Length = 669
Score = 174 (66.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHP + + PL + FL++HSLDMKFTY DE + + G++PD I S
Sbjct: 215 PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSA 274
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 275 YEYIHALDS 283
Score = 172 (65.6 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 34/94 (36%), Positives = 59/94 (62%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVN 56
+++L+G +I++ HPCD E++ L+ + + +R +R+K TL+S+GR +N
Sbjct: 121 QLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLSSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV+HC+GH+ + PA GS +EP
Sbjct: 181 LKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEP 214
>UNIPROTKB|Q9Y2N7 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005886 GO:GO:0005654 GO:GO:0003677 GO:GO:0045944
EMBL:CH471126 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
Pathway_Interaction_DB:hif1apathway GO:GO:0061418 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 EMBL:AB054067 EMBL:AF463492 EMBL:AB118749
EMBL:AB295039 EMBL:AK021653 EMBL:AK024095 EMBL:AK027725
EMBL:AK297828 EMBL:AC007193 EMBL:BC080551 IPI:IPI00164458
IPI:IPI00292048 IPI:IPI00470784 IPI:IPI00738729 IPI:IPI00746815
IPI:IPI00844043 IPI:IPI00844320 PIR:JC7771 RefSeq:NP_071907.4
RefSeq:NP_690007.1 RefSeq:NP_690008.2 UniGene:Hs.420830
ProteinModelPortal:Q9Y2N7 SMR:Q9Y2N7 STRING:Q9Y2N7
PhosphoSite:Q9Y2N7 DMDM:145558932 PRIDE:Q9Y2N7
Ensembl:ENST00000244302 Ensembl:ENST00000244303
Ensembl:ENST00000300862 Ensembl:ENST00000377670 GeneID:64344
KEGG:hsa:64344 UCSC:uc002peh.3 UCSC:uc002pel.3 CTD:64344
GeneCards:GC19P046800 HGNC:HGNC:15825 HPA:HPA041141 MIM:609976
neXtProt:NX_Q9Y2N7 PharmGKB:PA29285 eggNOG:NOG288942
InParanoid:Q9Y2N7 KO:K09096 GenomeRNAi:64344 NextBio:66283
ArrayExpress:Q9Y2N7 Bgee:Q9Y2N7 CleanEx:HS_HIF3A
Genevestigator:Q9Y2N7 Uniprot:Q9Y2N7
Length = 669
Score = 174 (66.3 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIR-----AQRSVFIRLKCTLTSKGRNVN 56
+++L+G SI++ HPCD E++ L+ T R +R +R+K TLTS+GR +N
Sbjct: 121 QLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKSTLTSRGRTLN 180
Query: 57 VKAATYKVIHCTGHLVQNQTPASN---GSTLMEP 87
+KAAT+KV++C+GH+ + PA GS EP
Sbjct: 181 LKAATWKVLNCSGHMRAYKPPAQTSPAGSPDSEP 214
Score = 171 (65.3 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 126 PSHCFVAIGEPIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
P C V I E IPHP + + PL + FL++HSLDMKFTY D+ + + G++PD I S
Sbjct: 215 PLQCLVLICEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSA 274
Query: 185 FDFHHAQDS 193
+++ HA DS
Sbjct: 275 YEYIHALDS 283
>UNIPROTKB|Q9I8A9 [details] [associations]
symbol:hif1a "Hypoxia-inducible factor 1-alpha"
species:8355 "Xenopus laevis" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0035035
"histone acetyltransferase binding" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AJ277829 RefSeq:NP_001165655.1
UniGene:Xl.4589 ProteinModelPortal:Q9I8A9 SMR:Q9I8A9
GeneID:100337573 KEGG:xla:100337573 Uniprot:Q9I8A9
Length = 805
Score = 217 (81.4 bits), Expect = 7.5e-23, Sum P(2) = 7.5e-23
Identities = 40/90 (44%), Positives = 61/90 (67%)
Query: 108 DDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADE 166
D++ + G K+ P C V I EPIPHP+N + PL S+TFL++HSLDMKF+Y DE
Sbjct: 203 DNANNQNHCGYKK----PPMTCMVVICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDE 258
Query: 167 TMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
+ + +G+ PD + +SV++++HA DS H+
Sbjct: 259 RVTELVGYEPDELLGRSVYEYYHALDSDHL 288
Score = 84 (34.6 bits), Expect = 7.5e-23, Sum P(2) = 7.5e-23
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNV--KAAT 61
+L G S+++ THPCDH E++ +L+ + + +R+ R K L S +N K
Sbjct: 126 ELTGHSVFDFTHPCDHEELREMLTFRNGPAKKRKRTNH-REKF-LPSYEMYINQSWKNRE 183
Query: 62 YKVIHCTG 69
YKV H G
Sbjct: 184 YKVSHMEG 191
>ZFIN|ZDB-GENE-041210-5 [details] [associations]
symbol:sim1b "single-minded homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-041210-5 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 eggNOG:NOG310284
HOGENOM:HOG000236298 EMBL:BX649468 OrthoDB:EOG4QC14V EMBL:FJ654702
IPI:IPI00929984 RefSeq:NP_001153057.1 UniGene:Dr.155154
Ensembl:ENSDART00000023483 GeneID:566656 KEGG:dre:566656 CTD:566656
NextBio:20888303 Uniprot:C1JIE2
Length = 586
Score = 155 (59.6 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+ H+ ++ +RS F+R+KC L RN
Sbjct: 124 QVELTGNSIYEYVHPADHDEMAAVLTPQPSYHSHFVQEYEVERSFFLRMKCVLAK--RNA 181
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 182 GLTSGGYKVIHCSGYL 197
Score = 119 (46.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + D G+ P I K+++ H
Sbjct: 219 VAVGHTLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVSDLTGYEPQDLIEKTLYHHVH 278
Query: 190 AQDSFHIQNA 199
DSFH++ A
Sbjct: 279 CCDSFHLRCA 288
>UNIPROTKB|E1BSJ1 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009880
"embryonic pattern specification" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02010800 IPI:IPI00597363
Ensembl:ENSGALT00000025849 OMA:FEPQDLI Uniprot:E1BSJ1
Length = 419
Score = 156 (60.0 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 174 GLTCSGYKVIHCSGYL 189
Score = 108 (43.1 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 211 VAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D FH++ A
Sbjct: 271 GCDVFHLRYA 280
>MGI|MGI:98306 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:98306 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V
CTD:6492 OMA:NSMPHIT EMBL:U40575 EMBL:AF038857 EMBL:AF038853
EMBL:AF038854 EMBL:AF038856 EMBL:AF044913 EMBL:AF038855 EMBL:D79209
EMBL:AB013491 IPI:IPI00117015 RefSeq:NP_035506.2 UniGene:Mm.4774
ProteinModelPortal:Q61045 SMR:Q61045 IntAct:Q61045 STRING:Q61045
PhosphoSite:Q61045 PRIDE:Q61045 DNASU:20464
Ensembl:ENSMUST00000020071 GeneID:20464 KEGG:mmu:20464
UCSC:uc007fal.1 InParanoid:Q61045 NextBio:298559 Bgee:Q61045
CleanEx:MM_SIM1 Genevestigator:Q61045 GermOnline:ENSMUSG00000019913
Uniprot:Q61045
Length = 765
Score = 158 (60.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ YKVIHC+G+L
Sbjct: 174 GLTCGGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRCA 280
>RGD|1309949 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:1309949
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 EMBL:CH474025 KO:K09100
OrthoDB:EOG4QC14V CTD:6492 OMA:NSMPHIT IPI:IPI00361456
RefSeq:NP_001101111.1 UniGene:Rn.165946 Ensembl:ENSRNOT00000057010
GeneID:309888 KEGG:rno:309888 UCSC:RGD:1309949 NextBio:661438
Uniprot:D3ZMU8
Length = 765
Score = 158 (60.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ YKVIHC+G+L
Sbjct: 174 GLTCGGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRCA 280
>UNIPROTKB|E1C5G3 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001657 "ureteric bud development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:AADN02002234
KO:K09100 CTD:6492 OMA:NSMPHIT EMBL:AADN02002235 EMBL:AADN02002236
EMBL:AADN02002237 IPI:IPI00821218 RefSeq:XP_419817.2
UniGene:Gga.31324 Ensembl:ENSGALT00000024939 GeneID:396129
KEGG:gga:396129 NextBio:20816186 Uniprot:E1C5G3
Length = 766
Score = 158 (60.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ YKVIHC+G+L
Sbjct: 174 GLTCGGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRCA 280
>UNIPROTKB|F1N178 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:DAAA02026200 EMBL:DAAA02026201 IPI:IPI00999630
UniGene:Bt.106531 Ensembl:ENSBTAT00000002960 NextBio:20877091
Uniprot:F1N178
Length = 766
Score = 158 (60.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ YKVIHC+G+L
Sbjct: 174 GLTCGGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRCA 280
>UNIPROTKB|E2QWV9 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 KO:K09100 CTD:6492
OMA:NSMPHIT EMBL:AAEX03008562 RefSeq:XP_539058.2
ProteinModelPortal:E2QWV9 Ensembl:ENSCAFT00000005680 GeneID:481937
KEGG:cfa:481937 NextBio:20856645 Uniprot:E2QWV9
Length = 766
Score = 158 (60.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ YKVIHC+G+L
Sbjct: 174 GLTCGGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRCA 280
>UNIPROTKB|P81133 [details] [associations]
symbol:SIM1 "Single-minded homolog 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001657
EMBL:Z86062 eggNOG:NOG310284 HOGENOM:HOG000236298
HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V EMBL:U70212
EMBL:AL121948 IPI:IPI00292234 RefSeq:NP_005059.2 UniGene:Hs.520293
ProteinModelPortal:P81133 SMR:P81133 STRING:P81133
PhosphoSite:P81133 DMDM:109940166 PRIDE:P81133 DNASU:6492
Ensembl:ENST00000262901 Ensembl:ENST00000369208 GeneID:6492
KEGG:hsa:6492 UCSC:uc003pqj.4 CTD:6492 GeneCards:GC06M100882
HGNC:HGNC:10882 HPA:HPA002084 HPA:HPA024385 MIM:603128
neXtProt:NX_P81133 Orphanet:171829 PharmGKB:PA35782
InParanoid:P81133 OMA:NSMPHIT PhylomeDB:P81133 ChiTaRS:SIM1
GenomeRNAi:6492 NextBio:25231 Bgee:P81133 CleanEx:HS_SIM1
Genevestigator:P81133 GermOnline:ENSG00000112246 Uniprot:P81133
Length = 766
Score = 158 (60.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ YKVIHC+G+L
Sbjct: 174 GLTCGGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRCA 280
>UNIPROTKB|F1RYR5 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:CU024902 Ensembl:ENSSSCT00000004814 Uniprot:F1RYR5
Length = 767
Score = 158 (60.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H+ ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ YKVIHC+G+L
Sbjct: 174 GLTCGGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRCA 280
>UNIPROTKB|H7BZX8 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0004871
SMART:SM00086 EMBL:AP000697 EMBL:AP000698 HGNC:HGNC:10883
ProteinModelPortal:H7BZX8 Ensembl:ENST00000431229 Uniprot:H7BZX8
Length = 480
Score = 156 (60.0 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 54 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 111
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 112 GLTCSGYKVIHCSGYL 127
Score = 107 (42.7 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 149 VAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYHHVH 208
Query: 190 AQDSFHIQNA 199
D FH++ A
Sbjct: 209 GCDVFHLRYA 218
>MGI|MGI:98307 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030324 "lung development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:98307 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 CTD:6493
OMA:KKPMLPA OrthoDB:EOG43N7CB EMBL:U42554 EMBL:D63383 EMBL:U40576
EMBL:AF023873 EMBL:AF023864 EMBL:AF023865 EMBL:AF023869
EMBL:AF023871 EMBL:AF023870 EMBL:AF023868 EMBL:AF023867
EMBL:AF023866 EMBL:AF023872 EMBL:D64135 IPI:IPI00117078
RefSeq:NP_035507.2 UniGene:Mm.4775 ProteinModelPortal:Q61079
SMR:Q61079 IntAct:Q61079 STRING:Q61079 PhosphoSite:Q61079
PRIDE:Q61079 Ensembl:ENSMUST00000072182 GeneID:20465 KEGG:mmu:20465
UCSC:uc008aae.1 InParanoid:Q61079 NextBio:298563 Bgee:Q61079
CleanEx:MM_SIM2 Genevestigator:Q61079 Uniprot:Q61079
Length = 657
Score = 156 (60.0 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 174 GLTCSGYKVIHCSGYL 189
Score = 111 (44.1 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 211 VAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRYA 280
>UNIPROTKB|E1BJ63 [details] [associations]
symbol:E1BJ63 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR013655 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 EMBL:DAAA02003571
EMBL:DAAA02003572 IPI:IPI00695521 Ensembl:ENSBTAT00000028592
Uniprot:E1BJ63
Length = 540
Score = 156 (60.0 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 1 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 58
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 59 GLTCSGYKVIHCSGYL 74
Score = 108 (43.1 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 96 VAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVH 155
Query: 190 AQDSFHIQNA 199
D FH++ A
Sbjct: 156 GCDVFHLRYA 165
>UNIPROTKB|F1MKK8 [details] [associations]
symbol:LOC782260 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS51302
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 GO:GO:0009880
OMA:KKPMLPA EMBL:DAAA02003571 EMBL:DAAA02003572 IPI:IPI00905160
Ensembl:ENSBTAT00000052408 Uniprot:F1MKK8
Length = 555
Score = 156 (60.0 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 1 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 58
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 59 GLTCSGYKVIHCSGYL 74
Score = 108 (43.1 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 96 VAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVH 155
Query: 190 AQDSFHIQNA 199
D FH++ A
Sbjct: 156 GCDVFHLRYA 165
>UNIPROTKB|E2RDR2 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 OMA:KKPMLPA
EMBL:AAEX03016522 Ensembl:ENSCAFT00000015386 Uniprot:E2RDR2
Length = 562
Score = 156 (60.0 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 174 GLTCSGYKVIHCSGYL 189
Score = 108 (43.1 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 211 VAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D FH++ A
Sbjct: 271 GCDVFHLRYA 280
>RGD|1308016 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009880 "embryonic
pattern specification" evidence=IEA;ISO] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:1308016 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0009880 KO:K09100 CTD:6493 OrthoDB:EOG43N7CB EMBL:CH474083
IPI:IPI00362902 RefSeq:NP_001100578.1 UniGene:Rn.113883
Ensembl:ENSRNOT00000002294 GeneID:304071 KEGG:rno:304071
UCSC:RGD:1308016 NextBio:652548 Uniprot:D4AA36
Length = 656
Score = 156 (60.0 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 174 GLTCSGYKVIHCSGYL 189
Score = 108 (43.1 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L + F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 211 VAVGQSLPPSAITEIKLHNNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D+FH++ A
Sbjct: 271 GCDTFHLRYA 280
>UNIPROTKB|Q14190 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 EMBL:CH471079
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GO:GO:0009880 EMBL:AP000697 EMBL:AP001726
eggNOG:NOG310284 HOVERGEN:HBG003936 KO:K09100 EMBL:U80456
EMBL:U80457 EMBL:AB003185 EMBL:BC110444 EMBL:D85922 EMBL:D44444
EMBL:D44445 EMBL:D44446 EMBL:D44447 EMBL:D44448 EMBL:AJ001858
EMBL:X84790 EMBL:D70838 IPI:IPI00029105 IPI:IPI00220895 PIR:A58520
PIR:I78525 PIR:I78526 RefSeq:NP_005060.1 RefSeq:NP_033664.2
UniGene:Hs.146186 ProteinModelPortal:Q14190 SMR:Q14190
IntAct:Q14190 STRING:Q14190 PhosphoSite:Q14190 DMDM:2851630
PaxDb:Q14190 PRIDE:Q14190 Ensembl:ENST00000290399
Ensembl:ENST00000430056 GeneID:6493 KEGG:hsa:6493 UCSC:uc002yvq.3
UCSC:uc002yvr.2 CTD:6493 GeneCards:GC21P038071 HGNC:HGNC:10883
HPA:HPA029295 MIM:600892 neXtProt:NX_Q14190 PharmGKB:PA35783
InParanoid:Q14190 OMA:KKPMLPA OrthoDB:EOG43N7CB PhylomeDB:Q14190
GenomeRNAi:6493 NextBio:25235 Bgee:Q14190 CleanEx:HS_SIM2
Genevestigator:Q14190 GermOnline:ENSG00000159263 Uniprot:Q14190
Length = 667
Score = 156 (60.0 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H ++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 174 GLTCSGYKVIHCSGYL 189
Score = 107 (42.7 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 211 VAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
D FH++ A
Sbjct: 271 GCDVFHLRYA 280
>UNIPROTKB|I3LA51 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 OMA:KKPMLPA
EMBL:FP325296 Ensembl:ENSSSCT00000025022 Uniprot:I3LA51
Length = 614
Score = 154 (59.3 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---H---TEDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SIYE HP DH E+ ++L+A+ H + +RS F+R+KC L RN
Sbjct: 58 QVELTGNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLSEYEIERSFFLRMKCVLAK--RNA 115
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 116 GLTCSGYKVIHCSGYL 131
Score = 108 (43.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G+ +P A ++ L S F+ + SLD+K + D + + G+ P I K+++ H
Sbjct: 153 VAVGQSLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVH 212
Query: 190 AQDSFHIQNA 199
D FH++ A
Sbjct: 213 GCDVFHLRYA 222
>ZFIN|ZDB-GENE-010803-1 [details] [associations]
symbol:sim2 "single-minded homolog 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-010803-1 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 HSSP:Q99814
eggNOG:NOG310284 OrthoDB:EOG4QC14V CTD:6493 EMBL:BC065360
EMBL:AF363019 IPI:IPI00487129 RefSeq:NP_571911.1 UniGene:Dr.15420
GeneID:114450 KEGG:dre:114450 InParanoid:Q8UVV3 OMA:ANIEPEM
NextBio:20796935 Uniprot:Q8UVV3
Length = 585
Score = 161 (61.7 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN---HT---EDIRAQRSVFIRLKCTLTSKGRNV 55
+V+L G SI+E HP DH E+ ++LS + HT +++ +RS F+R+KC L RN
Sbjct: 116 QVELTGNSIFEYIHPSDHDEMSAVLSTHQPLHTHFLQELELERSFFLRMKCVLAK--RNA 173
Query: 56 NVKAATYKVIHCTGHL 71
+ + YKVIHC+G+L
Sbjct: 174 GLTSGGYKVIHCSGYL 189
Score = 93 (37.8 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 127 SHC-FVAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSV 184
S C VA+ +P ++ L S F+ + SLD+K + D + + G P I K++
Sbjct: 203 SCCQLVAVAHSLPPSGLTEIKLHSNMFMFRASLDLKLIFLDSRVSELTGHEPQDLIEKTL 262
Query: 185 FDFHHAQDSFHIQNA 199
+ H D FH++ A
Sbjct: 263 YHHVHGCDVFHLRFA 277
>UNIPROTKB|Q0PGG7 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:30521 "Bos grunniens" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0019896 "axon
transport of mitochondrion" evidence=ISS] [GO:0035035 "histone
acetyltransferase binding" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0071456 "cellular response to hypoxia" evidence=ISS]
InterPro:IPR000014 InterPro:IPR001321 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0071456 GO:GO:0003700
GO:GO:0006351 GO:GO:0044212 GO:GO:0004871 GO:GO:0019896
GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0035035 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:DQ838046
EMBL:AY621118 ProteinModelPortal:Q0PGG7 SMR:Q0PGG7 Uniprot:Q0PGG7
Length = 823
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 24 SILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
S+ H D R + + L KG+ N + + + + CT S G T
Sbjct: 131 SVFDFTHPCDHEEMREMLTH-RNGLVKKGKEQNTQRSFFLRMKCT--------LTSRGRT 181
Query: 84 LMEPQDNIENQSDNTRRGSA-IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ NI++ + + I D + + + G K+ P C V I EPIPHP+N
Sbjct: 182 M-----NIKSATWKVLHCTGHIHVYDTNSNQSQCGYKK----PPMTCLVLICEPIPHPSN 232
Query: 143 YDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 233 IEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 36 (17.7 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 77 PASNGSTLMEPQ--DNIENQSDNTRRGSAIQDKDDSE 111
P S G + PQ D + SD + R S+ + SE
Sbjct: 482 PESLGLSFTMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|A0JND0 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:2001054 "negative regulation of
mesenchymal cell apoptotic process" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0061419
"positive regulation of transcription from RNA polymerase II
promoter in response to hypoxia" evidence=IEA] [GO:0061298 "retina
vasculature development in camera-type eye" evidence=IEA]
[GO:0061030 "epithelial cell differentiation involved in mammary
gland alveolus development" evidence=IEA] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0051541 "elastin metabolic
process" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0046886 "positive regulation of hormone
biosynthetic process" evidence=IEA] [GO:0046716 "muscle cell
homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 GO:GO:0061030 GO:GO:0003208
UniGene:Bt.4184 CTD:3091 KO:K08268 OMA:QNAQRKR GO:GO:0001922
GO:GO:0032963 GO:GO:0002248 GO:GO:0051541 GO:GO:0060574
GO:GO:2001054 GO:GO:0021502 GO:GO:0032909 GO:GO:0010573
EMBL:DAAA02029320 EMBL:BC126622 IPI:IPI00825226 RefSeq:NP_776764.2
SMR:A0JND0 STRING:A0JND0 Ensembl:ENSBTAT00000027885 GeneID:281814
KEGG:bta:281814 InParanoid:A0JND0 NextBio:20805726 Uniprot:A0JND0
Length = 823
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 24 SILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
S+ H D R + + L KG+ N + + + + CT S G T
Sbjct: 131 SVFDFTHPCDHEEMREMLTH-RNGLVKKGKEQNTQRSFFLRMKCT--------LTSRGRT 181
Query: 84 LMEPQDNIENQSDNTRRGSA-IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ NI++ + + I D + + + G K+ P C V I EPIPHP+N
Sbjct: 182 M-----NIKSATWKVLHCTGHIHVYDTNSNQSQCGYKK----PPMTCLVLICEPIPHPSN 232
Query: 143 YDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 233 IEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|Q9XTA5 [details] [associations]
symbol:HIF1A "Hypoxia-inducible factor 1-alpha"
species:9913 "Bos taurus" [GO:0019896 "axon transport of
mitochondrion" evidence=ISS] [GO:0071456 "cellular response to
hypoxia" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0071456 GO:GO:0003700 GO:GO:0006351
GO:GO:0044212 GO:GO:0004871 GO:GO:0019896 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:AB018398
IPI:IPI00689122 UniGene:Bt.4184 ProteinModelPortal:Q9XTA5
SMR:Q9XTA5 STRING:Q9XTA5 PRIDE:Q9XTA5 InParanoid:Q9XTA5
OrthoDB:EOG40CHGP Uniprot:Q9XTA5
Length = 823
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 24 SILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
S+ H D R + + L KG+ N + + + + CT S G T
Sbjct: 131 SVFDFTHPCDHEEMREMLTH-RNGLVKKGKEQNTQRSFFLRMKCT--------LTSRGRT 181
Query: 84 LMEPQDNIENQSDNTRRGSA-IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ NI++ + + I D + + + G K+ P C V I EPIPHP+N
Sbjct: 182 M-----NIKSATWKVLHCTGHIHVYDTNSNQSQCGYKK----PPMTCLVLICEPIPHPSN 232
Query: 143 YDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 233 IEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|F1PZ54 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 CTD:3091 KO:K08268
OMA:QNAQRKR EMBL:AAEX03005770 RefSeq:XP_003639249.1
Ensembl:ENSCAFT00000024897 GeneID:480348 KEGG:cfa:480348
Uniprot:F1PZ54
Length = 823
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 24 SILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
S+ H D R + + L KG+ N + + + + CT S G T
Sbjct: 131 SVFDFTHPCDHEEMREMLTH-RNGLVKKGKEQNTQRSFFLRMKCT--------LTSRGRT 181
Query: 84 LMEPQDNIENQSDNTRRGSA-IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ NI++ + + I D + + + G K+ P C V I EPIPHP+N
Sbjct: 182 M-----NIKSATWKVLHCTGHIHVYDTNSNQSQCGYKK----PPMTCLVLICEPIPHPSN 232
Query: 143 YDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 233 IEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|Q52RL7 [details] [associations]
symbol:Q52RL7 "Hypoxia inducible factor-1 alpha"
species:59538 "Pantholops hodgsonii" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:AY971808 ProteinModelPortal:Q52RL7
SMR:Q52RL7 Uniprot:Q52RL7
Length = 823
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 24 SILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
S+ H D R + + L KG+ N + + + + CT S G T
Sbjct: 131 SVFDFTHPCDHEEMREMLTH-RNGLVKKGKEQNTQRSFFLRMKCT--------LTSRGRT 181
Query: 84 LMEPQDNIENQSDNTRRGSA-IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ NI++ + + I D + + + G K+ P C V I EPIPHP+N
Sbjct: 182 M-----NIKSATWKVLHCTGHIHVYDTNSNQSQCGYKK----PPMTCLVLICEPIPHPSN 232
Query: 143 YDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 233 IEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 490 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 518
>UNIPROTKB|F1SRU5 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001054 "negative regulation of mesenchymal cell
apoptotic process" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:0061298 "retina vasculature development
in camera-type eye" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0046886 "positive regulation of
hormone biosynthetic process" evidence=IEA] [GO:0046716 "muscle
cell homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 GO:GO:0061030
GO:GO:0003208 OMA:QNAQRKR GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 EMBL:FP236550
Ensembl:ENSSSCT00000005618 ArrayExpress:F1SRU5 Uniprot:F1SRU5
Length = 824
Score = 218 (81.8 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 24 SILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGST 83
S+ H D R + + L KG+ N + + + + CT S G T
Sbjct: 131 SVFDFTHPCDHEEMREMLTH-RNGLVKKGKEQNTQRSFFLRMKCT--------LTSRGRT 181
Query: 84 LMEPQDNIENQSDNTRRGSA-IQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPAN 142
+ NI++ + + I D + + + G K+ P C V I EPIPHP+N
Sbjct: 182 M-----NIKSATWKVLHCTGHIHVYDTNNNQSQCGYKK----PPMTCLVLICEPIPHPSN 232
Query: 143 YDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHI 196
++PL S+TFL++HSLDMKF+Y DE + + +G+ P+ + +S+++++HA DS H+
Sbjct: 233 IEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHL 287
Score = 208 (78.3 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT-----EDIRAQRSVFIRLKCTLTSKGRNVNVK 58
+L G S+++ THPCDH E++ +L+ + ++ QRS F+R+KCTLTS+GR +N+K
Sbjct: 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIK 185
Query: 59 AATYKVIHCTGHL 71
+AT+KV+HCTGH+
Sbjct: 186 SATWKVLHCTGHI 198
Score = 35 (17.4 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 83 TLMEPQDNIENQSDNTRRGSAIQDKDDSE 111
T+ + QD + SD + R S+ + SE
Sbjct: 491 TMPQIQDQPASPSDGSTRQSSPEPNSPSE 519
>FB|FBgn0015542 [details] [associations]
symbol:sima "similar" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS;NAS] [GO:0071456 "cellular response to hypoxia"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
EMBL:AE014297 GO:GO:0005634 GO:GO:0005737 GO:GO:0030308
GO:GO:0032869 GO:GO:0003677 GO:GO:0045944 GO:GO:0071456
GO:GO:0006351 GO:GO:0006974 GO:GO:0004871 SMART:SM00086
eggNOG:NOG289264 GeneTree:ENSGT00650000093281 KO:K08268 EMBL:U43090
PIR:JC4851 RefSeq:NP_524584.2 UniGene:Dm.6953
ProteinModelPortal:Q24167 SMR:Q24167 DIP:DIP-21002N IntAct:Q24167
MINT:MINT-304504 STRING:Q24167 PaxDb:Q24167
EnsemblMetazoa:FBtr0085565 GeneID:43580 KEGG:dme:Dmel_CG7951
CTD:43580 FlyBase:FBgn0015542 InParanoid:Q24167 OMA:PGPRTIT
OrthoDB:EOG4JQ2CF PhylomeDB:Q24167 ChiTaRS:sima GenomeRNAi:43580
NextBio:834672 Bgee:Q24167 GermOnline:CG7951 Uniprot:Q24167
Length = 1507
Score = 210 (79.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 44/106 (41%), Positives = 60/106 (56%)
Query: 98 TRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPL-SQTFLTKHS 156
T RG +I K S + V + +AIG PIPHP+N ++PL + TFLTKHS
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVNAKGERLLMAIGRPIPHPSNIEIPLGTSTFLTKHS 326
Query: 157 LDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFKN 202
LDM+FTY D+ M D LG++P + S+F H DS + FK+
Sbjct: 327 LDMRFTYVDDKMHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKS 372
Score = 208 (78.3 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 43/86 (50%), Positives = 58/86 (67%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS-----ANHTEDIRAQ--------RSVFIRLKCTL 48
K+D +GQ I+E +H CDH+E+K LS A +D Q R +F+RLKCTL
Sbjct: 207 KIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTL 266
Query: 49 TSKGRNVNVKAATYKVIHCTGHLVQN 74
TS+GR++N+K+A+YKVIH TGHLV N
Sbjct: 267 TSRGRSINIKSASYKVIHITGHLVVN 292
Score = 38 (18.4 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 7/39 (17%), Positives = 19/39 (48%)
Query: 88 QDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEP 126
Q + QS++ + + +DD + E + ++ + +P
Sbjct: 1278 QKQQQQQSNSVLKNLLVSGRDDDDSEAMIIDEDNSLVQP 1316
>ZFIN|ZDB-GENE-020829-1 [details] [associations]
symbol:sim1a "single-minded homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IGI;IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0021979 "hypothalamus
cell differentiation" evidence=IMP] [GO:0021536 "diencephalon
development" evidence=IMP] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-020829-1
GO:GO:0005634 GO:GO:0003677 GO:GO:0071542 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 HSSP:Q99814 eggNOG:NOG310284 GO:GO:0021979
EMBL:AY028626 IPI:IPI00494277 RefSeq:NP_835740.1 UniGene:Dr.25265
ProteinModelPortal:Q98SJ5 STRING:Q98SJ5 GeneID:260351
KEGG:dre:260351 CTD:260351 HOVERGEN:HBG003936 KO:K09100
OrthoDB:EOG4QC14V NextBio:20804722 ArrayExpress:Q98SJ5
Uniprot:Q98SJ5
Length = 745
Score = 145 (56.1 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSAN---HTE---DIRAQRSVFIRLKCTLTSKGRNVNV 57
+L G SIYE HP DH E+ ++L+A+ H+ + +RS F+R+KC L N +
Sbjct: 118 ELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVHEYEMERSFFLRMKCVLAKA--NAGL 175
Query: 58 KAATYKVIHCTGHL 71
YKVIHC+G+L
Sbjct: 176 TCGGYKVIHCSGYL 189
Score = 112 (44.5 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L S F+ + SLDMK + D + + G+ P I K+++ H
Sbjct: 211 VAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVH 270
Query: 190 AQDSFHIQNA 199
+ D+FH++ A
Sbjct: 271 SCDTFHLRCA 280
>UNIPROTKB|H0YI42 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 PROSITE:PS50112
SMART:SM00091 GO:GO:0004871 HGNC:HGNC:19311 EMBL:AL109769
EMBL:AL133305 EMBL:AL139296 EMBL:AL157689 EMBL:AL158802
EMBL:AL161851 EMBL:AL355886 Ensembl:ENST00000552874 Uniprot:H0YI42
Length = 132
Score = 102 (41.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 33 DIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTL 84
D +RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G T+
Sbjct: 3 DNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRTV 51
Score = 85 (35.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 124 TEPSHCF--VAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
T PS V + +P P +V + F+T+ ++D+ Y + + D++ P +
Sbjct: 50 TVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIV 109
Query: 181 AKSVFDFHHAQD 192
K + F HA+D
Sbjct: 110 GKRCYHFIHAED 121
>ZFIN|ZDB-GENE-050211-2 [details] [associations]
symbol:hif1al2 "hypoxia-inducible factor 1, alpha
subunit, like 2" species:7955 "Danio rerio" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-050211-2 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 EMBL:BX530031
IPI:IPI00554390 Ensembl:ENSDART00000130632 ArrayExpress:F1QQQ1
Bgee:F1QQQ1 Uniprot:F1QQQ1
Length = 663
Score = 116 (45.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAAT 61
++DL+G+S+ E HPCD EVK IL+ + VF+R+K + +N K
Sbjct: 147 QMDLIGRSLLEFLHPCDQMEVKDILTRLIGNQEPQKCEVFLRIK-------KAMNTKLTG 199
Query: 62 YKVIHCTGHLVQNQTPASN 80
+K+I C+G + TP S+
Sbjct: 200 WKIIQCSGKKRSSATPGSS 218
Score = 109 (43.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 28/86 (32%), Positives = 40/86 (46%)
Query: 117 GEKRRVVTEPSHCFVAIGE--PIPHPANYDVPLSQ-TFLTKHSLDMKFTYADETMEDFLG 173
G+KR T S C V PI D L+ TF++ HS DM FTY + +G
Sbjct: 207 GKKRSSATPGSSCLVLECRVLPIQEITEVDEALNACTFMSVHSPDMTFTYCHSRVVKLIG 266
Query: 174 FNPDIFIAKSVFDFHHAQDSFHIQNA 199
F + +SV+ ++H D I+ A
Sbjct: 267 FRDTDLLGQSVYQYYHPSDCQQIRKA 292
>UNIPROTKB|B4DR69 [details] [associations]
symbol:NPAS1 "cDNA FLJ51724, highly similar to Neuronal PAS
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR000014 SMART:SM00091 GO:GO:0004871 UniGene:Hs.79564
HGNC:HGNC:7894 EMBL:AC008755 EMBL:AK299128 IPI:IPI00910071
SMR:B4DR69 STRING:B4DR69 Ensembl:ENST00000439365 UCSC:uc010xyj.2
HOGENOM:HOG000207686 HOVERGEN:HBG103148 Uniprot:B4DR69
Length = 234
Score = 104 (41.7 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 18 DHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
D E+++ L+ + +RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 49 DTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 100
Score = 78 (32.5 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P ++PL + + SL + + + D + P + +S + F H
Sbjct: 108 VALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVH 167
Query: 190 AQDSFHIQNAFKNPC 204
QD+ I+ + + C
Sbjct: 168 GQDATRIRQSHVDSC 182
Score = 56 (24.8 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 5 LMGQSIYEVTHPCDHSEV 22
+ G S+++ HP DHSEV
Sbjct: 1 MTGSSVFDYIHPGDHSEV 18
>MGI|MGI:109205 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007610
"behavior" evidence=IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109205
GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 CTD:4861
eggNOG:NOG287666 HOGENOM:HOG000236298 HOVERGEN:HBG052655 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J EMBL:U77967 IPI:IPI00125487
RefSeq:NP_032744.1 UniGene:Mm.145821 ProteinModelPortal:P97459
SMR:P97459 STRING:P97459 PRIDE:P97459 Ensembl:ENSMUST00000002053
GeneID:18142 KEGG:mmu:18142 InParanoid:P97459 NextBio:293392
Bgee:P97459 CleanEx:MM_NPAS1 Genevestigator:P97459
GermOnline:ENSMUSG00000001988 Uniprot:P97459
Length = 594
Score = 105 (42.0 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 35 RAQ-RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
RAQ RS F+R+K TLT +G +NVKA+ YKVIH TG L
Sbjct: 242 RAQERSFFVRMKSTLTKRG--LNVKASGYKVIHVTGRL 277
Score = 72 (30.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P ++PL + + SL + + + D + P + +S + F H
Sbjct: 285 VALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVH 344
Query: 190 AQDSFHIQNA 199
QD+ I+ +
Sbjct: 345 GQDATRIRQS 354
Score = 65 (27.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV 22
+V+L G S+++ HP DHSEV
Sbjct: 174 QVELTGSSVFDYIHPGDHSEV 194
>UNIPROTKB|F1RM06 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:VYPHLQR EMBL:FP103026
Ensembl:ENSSSCT00000003447 Uniprot:F1RM06
Length = 598
Score = 104 (41.7 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 18 DHSEVKSILSANHTE---DIRAQ-RSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
D E+ S A+ TE R Q RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 228 DTPEIVSAPEASPTEMSPSSRVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL 283
Score = 72 (30.4 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P ++PL + + SL + + + D + P + +S + F H
Sbjct: 291 VALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVH 350
Query: 190 AQDSFHIQNA 199
QD+ I+ +
Sbjct: 351 GQDATRIRQS 360
Score = 65 (27.9 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV 22
+V+L G S+++ HP DHSEV
Sbjct: 174 QVELTGSSVFDYIHPGDHSEV 194
>UNIPROTKB|Q99742 [details] [associations]
symbol:NPAS1 "Neuronal PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0007417 "central
nervous system development" evidence=TAS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:U77968 EMBL:AB054002 EMBL:BC039016 EMBL:U51628 IPI:IPI00293815
RefSeq:NP_002508.2 UniGene:Hs.79564 ProteinModelPortal:Q99742
SMR:Q99742 STRING:Q99742 DMDM:59803108 PRIDE:Q99742
Ensembl:ENST00000449844 GeneID:4861 KEGG:hsa:4861 UCSC:uc002pfw.3
CTD:4861 GeneCards:GC19P047523 HGNC:HGNC:7894 MIM:603346
neXtProt:NX_Q99742 PharmGKB:PA31695 eggNOG:NOG287666
HOGENOM:HOG000236298 HOVERGEN:HBG052655 InParanoid:Q99742 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J PhylomeDB:Q99742 GenomeRNAi:4861
NextBio:18726 ArrayExpress:Q99742 Bgee:Q99742 CleanEx:HS_NPAS1
Genevestigator:Q99742 GermOnline:ENSG00000130751 Uniprot:Q99742
Length = 590
Score = 104 (41.7 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 18 DHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
D E+++ L+ + +RS F+R+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 225 DTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRG--LHVKASGYKVIHVTGRL 276
Score = 72 (30.4 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P ++PL + + SL + + + D + P + +S + F H
Sbjct: 284 VALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVH 343
Query: 190 AQDSFHIQNA 199
QD+ I+ +
Sbjct: 344 GQDATRIRQS 353
Score = 63 (27.2 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV 22
+V++ G S+++ HP DHSEV
Sbjct: 174 QVEMTGSSVFDYIHPGDHSEV 194
>ZFIN|ZDB-GENE-000509-2 [details] [associations]
symbol:arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-2
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG107503 OrthoDB:EOG4DFPNB GO:GO:0009648
eggNOG:NOG285764 EMBL:BC128806 IPI:IPI00482035 UniGene:Dr.81323
ProteinModelPortal:A1A5T9 InParanoid:A1A5T9 ArrayExpress:A1A5T9
Uniprot:A1A5T9
Length = 631
Score = 120 (47.3 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 125 EPSH--CFVAIGEPIPH--P-ANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDI 178
E SH C VA+G PH P AN ++ + T F+T++++D KFT+ D+ LG+ P
Sbjct: 322 ESSHFSCLVAMGRVHPHTLPQANGEIKVKPTEFVTRYAMDGKFTFVDQRATTILGYLPQE 381
Query: 179 FIAKSVFDFHHAQDSFHI 196
+ S +++ H D H+
Sbjct: 382 LLGTSCYEYFHLDDLPHL 399
Score = 65 (27.9 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN 29
+ +L+GQS+++ HP D +VK LSA+
Sbjct: 201 RTELIGQSLFDYVHPKDIGKVKEQLSAS 228
Score = 49 (22.3 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 36 AQRSVFIRLKCT-LTSK-------GRNVNVKAATYKVIHCTGHL 71
A+RS F R+K +T K G + ++ Y +HCTG++
Sbjct: 260 ARRSFFCRMKYNKITVKEEKDFQAGASKKKESQRYCTVHCTGYM 303
Score = 40 (19.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 76 TPASNGSTLMEPQDNIENQSDNTRRGSAI---QDKDDS--EPEEEVGEKRRVVTEP 126
TP S S+LME + DN SA +D +D E++ K + + EP
Sbjct: 39 TPTS-ASSLMELPRKRKGSMDNLEMKSASNLDEDMEDDAGRSEDDQHLKIKCIREP 93
>FB|FBgn0264075 [details] [associations]
symbol:tgo "tango" species:7227 "Drosophila melanogaster"
[GO:0007422 "peripheral nervous system development" evidence=TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=TAS;IPI]
[GO:0005634 "nucleus" evidence=IC;ISS;IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=TAS] [GO:0007425 "epithelial cell fate
determination, open tracheal system" evidence=NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA;TAS;IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0071456 "cellular
response to hypoxia" evidence=IDA] [GO:0032869 "cellular response
to insulin stimulus" evidence=IDA] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043234 "protein
complex" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008347 "glial cell migration"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0043234 GO:GO:0007420 GO:GO:0032869
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 GO:GO:0071456
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048813 GO:GO:0004871 GO:GO:0007517 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
KO:K09097 EMBL:AB002556 EMBL:AF016053 EMBL:AF020426 EMBL:AF154417
EMBL:AY069581 EMBL:M14550 RefSeq:NP_731308.1 UniGene:Dm.3376
ProteinModelPortal:O15945 SMR:O15945 IntAct:O15945 MINT:MINT-875932
STRING:O15945 PaxDb:O15945 EnsemblMetazoa:FBtr0082005 GeneID:41084
KEGG:dme:Dmel_CG11987 CTD:41084 FlyBase:FBgn0015014
InParanoid:O15945 OMA:QPVTEGY OrthoDB:EOG4GTHV2 PhylomeDB:O15945
GenomeRNAi:41084 NextBio:822075 Bgee:O15945 GermOnline:CG11987
GO:GO:0007425 GO:GO:0008347 Uniprot:O15945
Length = 642
Score = 151 (58.2 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 50/211 (23%), Positives = 99/211 (46%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAA--T 61
D G S+YE HP D +++ LS +++ A R + ++ T+ +G +++ +
Sbjct: 127 DWYGTSLYEHIHPDDREKIREQLSTQESQN--AGRILDLK-SGTVKKEGHQSSMRLSMGA 183
Query: 62 YKVIHCTGHL--VQNQTPASNGSTLMEPQDNIENQSDNTRRGSA-----IQDKDDSEPEE 114
+ C + V ++ S ++ ++++ D T I++ ++
Sbjct: 184 RRGFICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTDMFP 243
Query: 115 EVGEKRRVVTEPSHC-FVAIGE-PIPHPANYDVPLSQT---FLTKHSLDMKFTYADETME 169
+ +R V SHC VAIG + A D+ S F+T+H++D KFT+ D+ +
Sbjct: 244 NMHMERDVDDMSSHCCLVAIGRLQVTSTAANDMSGSNNQSEFITRHAMDGKFTFVDQRVL 303
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQNAF 200
+ LG+ P + K +DF H +D H++ +F
Sbjct: 304 NILGYTPTELLGKICYDFFHPEDQSHMKESF 334
>UNIPROTKB|J9P6G5 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:AAEX03000848 EMBL:AAEX03000849 EMBL:AAEX03000850
EMBL:AAEX03000851 RefSeq:XP_541539.2 Ensembl:ENSCAFT00000047187
GeneID:484424 KEGG:cfa:484424 Uniprot:J9P6G5
Length = 594
Score = 98 (39.6 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 247 ERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL 279
Score = 72 (30.4 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 131 VAIGEPIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P ++PL + + SL + + + D + P + +S + F H
Sbjct: 287 VALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVH 346
Query: 190 AQDSFHIQNA 199
QD+ I+ +
Sbjct: 347 GQDAARIRQS 356
Score = 65 (27.9 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV 22
+V+L G S+++ HP DHSEV
Sbjct: 175 QVELTGSSVFDYIHPGDHSEV 195
>FB|FBgn0262139 [details] [associations]
symbol:trh "trachealess" species:7227 "Drosophila
melanogaster" [GO:0072175 "epithelial tube formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA;TAS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007424 "open tracheal system
development" evidence=NAS;IMP;TAS] [GO:0007431 "salivary gland
development" evidence=NAS;IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=TAS;IPI] [GO:0035277
"spiracle morphogenesis, open tracheal system" evidence=IMP]
[GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;TAS;IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0007425 "epithelial cell fate determination, open tracheal
system" evidence=IMP;TAS] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP;TAS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 EMBL:AE014296 GO:GO:0007435 GO:GO:0043565
GO:GO:0035277 GO:GO:0048813 GO:GO:0004871 GO:GO:0000981
GO:GO:0046982 SMART:SM00086 GO:GO:0046331 SUPFAM:SSF47459
GO:GO:0007425 GO:GO:0007443 eggNOG:NOG287666 KO:K09098
GO:GO:0072175 CTD:7200 EMBL:U33427 EMBL:U42699 EMBL:BT031114
EMBL:AY094911 RefSeq:NP_001036575.1 RefSeq:NP_001097461.2
RefSeq:NP_523872.2 UniGene:Dm.7330 ProteinModelPortal:Q24119
SMR:Q24119 STRING:Q24119 GeneID:38065 KEGG:dme:Dmel_CG42865
FlyBase:FBgn0262139 InParanoid:Q24119 OMA:PNASESH OrthoDB:EOG4JWSVB
GenomeRNAi:38065 NextBio:806807 Bgee:Q24119 GermOnline:CG6883
Uniprot:Q24119
Length = 1022
Score = 134 (52.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 42/188 (22%), Positives = 88/188 (46%)
Query: 14 THPCDHSEVKSILSANHTEDIRA-QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLV 72
TH ++ +V + ++ T + RS +R+K TLT +G + K++ Y+ T +
Sbjct: 279 THGTNNPDVAASMTQASTSGYKGYDRSFCVRMKSTLTKRG--CHFKSSGYRASDATSNC- 335
Query: 73 QNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEKRRVVTEPSHCFVA 132
N ASN + N++N N S + P+ R+ P VA
Sbjct: 336 NNGNNASNNAK------NVKNPGSNY---SVVLLLCKLRPQYTFSHSRKS-QPPLLGMVA 385
Query: 133 IGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQ 191
+ +P P+ +++ L F+T+ + D++ + + + D L ++P+ + KS++ HA+
Sbjct: 386 LAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAE 445
Query: 192 DSFHIQNA 199
D+ ++ +
Sbjct: 446 DANRLRKS 453
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHT 31
+V++ G SI++ H DHSE+ L + T
Sbjct: 213 QVEMTGSSIFDYIHQADHSEIADQLGLSLT 242
>UNIPROTKB|F6ZT88 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] InterPro:IPR000014
InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112 SMART:SM00091
InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355 GO:GO:0004871
SMART:SM00086 Ensembl:ENSMODT00000022361 Uniprot:F6ZT88
Length = 726
Score = 106 (42.4 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 31 TEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTL 84
T D +RS FIR+K TLT +G V++K++ YKVIH TG L + + S+G T+
Sbjct: 49 TTDNTLERSFFIRMKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRTV 99
Score = 85 (35.0 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 124 TEPSHCF--VAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
T PS V + +P P +V + F+T+ ++D+ Y + + D++ P +
Sbjct: 98 TVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIV 157
Query: 181 AKSVFDFHHAQD 192
K + F HA+D
Sbjct: 158 GKRCYHFIHAED 169
>ZFIN|ZDB-GENE-030408-1 [details] [associations]
symbol:arntl1b "aryl hydrocarbon receptor nuclear
translocator-like 1b" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0009648 "photoperiodism" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-030408-1
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009648 EMBL:CR318647 IPI:IPI00859492
Ensembl:ENSDART00000098259 OMA:REKINTH Uniprot:E7F4H0
Length = 646
Score = 110 (43.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 129 CFVAIGE--P--IPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG P +P P N D+ + T ++++H++D KF + D+ L + P + S
Sbjct: 339 CLVAIGRLHPHIVPQPVNGDIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 398
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 399 FYEYFHQDDIGHL 411
Score = 68 (29.0 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 212 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 239
Score = 40 (19.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 36 AQRSVFIRLKCT-----LTSKG--RNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLM 85
A+RS F R+KC + K + K A K IH TG+L ++ P G
Sbjct: 269 ARRSFFCRMKCNRSMVKMEDKDFPSTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGLDED 327
Query: 86 EPQDN 90
DN
Sbjct: 328 NEPDN 332
>FB|FBgn0004666 [details] [associations]
symbol:sim "single-minded" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007418
"ventral midline development" evidence=IMP] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;IPI] [GO:0007417 "central nervous system
development" evidence=NAS] [GO:0007398 "ectoderm development"
evidence=TAS] [GO:0007628 "adult walking behavior"
evidence=IMP;TAS] [GO:0040011 "locomotion" evidence=TAS]
[GO:0007420 "brain development" evidence=IMP] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007419 "ventral cord development"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0007420 GO:GO:0007419 GO:GO:0045944
GO:GO:0005667 GO:GO:0035225 GO:GO:0000978 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007398 GO:GO:0007628 GO:GO:0007418 eggNOG:NOG310284
KO:K09100 EMBL:AF071934 EMBL:AY129457 EMBL:M19020 PIR:A29945
PIR:A41647 RefSeq:NP_524340.2 RefSeq:NP_731771.3 UniGene:Dm.4557
ProteinModelPortal:P05709 SMR:P05709 STRING:P05709 GeneID:41612
KEGG:dme:Dmel_CG7771 CTD:41612 FlyBase:FBgn0004666
InParanoid:P05709 OrthoDB:EOG4MPG5H GenomeRNAi:41612 NextBio:824647
Bgee:P05709 GermOnline:CG7771 Uniprot:P05709
Length = 697
Score = 98 (39.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 131 VAIGEPIPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHH 189
VA+G +P A ++ L Q F+ + LDMK + D + G+ P I K+++ + H
Sbjct: 259 VAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIH 318
Query: 190 AQD 192
A D
Sbjct: 319 AAD 321
Score = 89 (36.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 13 VTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
V HP + + +HT +I +++ F+R+KC L RN + + +KVIHC+G+L
Sbjct: 187 VQHPSAYDHDRG----SHTIEI--EKTFFLRMKCVLAK--RNAGLTTSGFKVIHCSGYL 237
Score = 59 (25.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILS 27
+V+L G SI+E H D E+ +ILS
Sbjct: 139 QVELTGNSIFEYIHNYDQDEMNAILS 164
>ZFIN|ZDB-GENE-000509-1 [details] [associations]
symbol:arntl1a "aryl hydrocarbon receptor nuclear
translocator-like 1a" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0007623 "circadian rhythm" evidence=IGI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-1
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC GO:GO:0009648
EMBL:CR759966 EMBL:AF144689 EMBL:AF144690 IPI:IPI00490446
RefSeq:NP_571652.1 UniGene:Dr.75458 DIP:DIP-46453N STRING:Q9I879
Ensembl:ENSDART00000023959 Ensembl:ENSDART00000148660 GeneID:58098
KEGG:dre:58098 CTD:58098 InParanoid:Q9I879 NextBio:20892352
Uniprot:Q9I879
Length = 626
Score = 109 (43.4 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 129 CFVAIGE--P--IPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG P +P P N D+ + T ++++H++D KF + D+ L + P + S
Sbjct: 317 CLVAIGRLHPHIVPQPMNGDIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 376
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 377 FYEYFHQDDIGHL 389
Score = 68 (29.0 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 190 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 217
Score = 40 (19.1 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 247 ARRSFFCRMKCNRPS 261
>UNIPROTKB|Q91YA9 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:1026970 "Nannospalax galili"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
Length = 626
Score = 108 (43.1 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P PA D+ + T ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHVVPQPAGGDIKVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 40 (19.1 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 243 ARRSFFCRMKCNRPS 257
>MGI|MGI:1096381 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear
translocator-like" species:10090 "Mus musculus" [GO:0000060
"protein import into nucleus, translocation" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
"circadian regulation of gene expression" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
Length = 632
Score = 107 (42.7 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P PAN ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 319 CLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 378
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 379 CYEYFHQDDIGHL 391
Score = 68 (29.0 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 220
Score = 41 (19.5 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 36 AQRSVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLME 86
A+RS F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 250 ARRSFFCRMKCNRPSVKVEDKDFASTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGLDEDN 308
Query: 87 PQDN 90
DN
Sbjct: 309 EPDN 312
>UNIPROTKB|E1BLF5 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
NextBio:20875311 Uniprot:E1BLF5
Length = 626
Score = 107 (42.7 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P PAN ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 40 (19.1 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 243 ARRSFFCRMKCNRPS 257
>UNIPROTKB|E2R130 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
Ensembl:ENSCAFT00000012969 Uniprot:E2R130
Length = 627
Score = 107 (42.7 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N D+ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHVVPQPVNGDIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 40 (19.1 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 243 ARRSFFCRMKCNRPS 257
>UNIPROTKB|J9P3T5 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03015178
Ensembl:ENSCAFT00000046810 Uniprot:J9P3T5
Length = 593
Score = 99 (39.9 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKFTYADETM 168
EEE K+ + C VAIG P+ P N ++ + T F+T+ +++ KF Y D+
Sbjct: 289 EEERDNKKN--SSNFTCLVAIGRLHPYIVPQNSGEIKVKPTEFITRFAMNGKFVYVDQRA 346
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
LG+ P + S +++ H D ++ + K
Sbjct: 347 TAILGYLPQELLGTSCYEYFHQDDHSNLTDKHK 379
Score = 64 (27.6 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 36 AQRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQ 88
++RS F R+K C ++ K + + + K IHCTG+L ++ P G L E +
Sbjct: 236 SRRSFFCRMKSCKISVKEEHECLSTSKKKDHRKFCTIHCTGYL-RSWPPNIVG--LEEER 292
Query: 89 DNIENQSDNT 98
DN +N S+ T
Sbjct: 293 DNKKNSSNFT 302
Score = 53 (23.7 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN 29
+ L G+S+++ HP D ++VK LS++
Sbjct: 177 QASLTGRSLFDFLHPKDVAKVKEQLSSS 204
>UNIPROTKB|J9NTT7 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:EKINTNC EMBL:AAEX03012928
Ensembl:ENSCAFT00000044767 Uniprot:J9NTT7
Length = 659
Score = 107 (42.7 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N D+ + S ++++H++D KF + D+ L + P + S
Sbjct: 345 CLVAIGRLHSHVVPQPVNGDIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 404
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 405 CYEYFHQDDIGHL 417
Score = 68 (29.0 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 218 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 245
Score = 40 (19.1 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 275 ARRSFFCRMKCNRPS 289
>UNIPROTKB|F1PZY3 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AAEX03015178 Ensembl:ENSCAFT00000017664
Uniprot:F1PZY3
Length = 624
Score = 99 (39.9 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKFTYADETM 168
EEE K+ + C VAIG P+ P N ++ + T F+T+ +++ KF Y D+
Sbjct: 320 EEERDNKKN--SSNFTCLVAIGRLHPYIVPQNSGEIKVKPTEFITRFAMNGKFVYVDQRA 377
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
LG+ P + S +++ H D ++ + K
Sbjct: 378 TAILGYLPQELLGTSCYEYFHQDDHSNLTDKHK 410
Score = 64 (27.6 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 36 AQRSVFIRLK-CTLTSKGRNVNVKAATYK------VIHCTGHLVQNQTPASNGSTLMEPQ 88
++RS F R+K C ++ K + + + K IHCTG+L ++ P G L E +
Sbjct: 267 SRRSFFCRMKSCKISVKEEHECLSTSKKKDHRKFCTIHCTGYL-RSWPPNIVG--LEEER 323
Query: 89 DNIENQSDNT 98
DN +N S+ T
Sbjct: 324 DNKKNSSNFT 333
Score = 53 (23.7 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN 29
+ L G+S+++ HP D ++VK LS++
Sbjct: 208 QASLTGRSLFDFLHPKDVAKVKEQLSSS 235
>UNIPROTKB|Q9I8T7 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
Uniprot:Q9I8T7
Length = 633
Score = 106 (42.4 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 129 CFVAIGE--P--IPHPANYDVPLSQT-FLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG P +P P N ++ + T ++++H++D KF + D+ L + P + S
Sbjct: 320 CLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 379
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 380 CYEYFHQDDIGHL 392
Score = 68 (29.0 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 193 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 220
Score = 40 (19.1 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 250 ARRSFFCRMKCNRPS 264
>UNIPROTKB|F8W6J9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
Length = 526
Score = 103 (41.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 243 ARRSFFCRMKCNRPS 257
>UNIPROTKB|Q5R4T2 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9601 "Pongo abelii"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
KEGG:pon:100173916 Uniprot:Q5R4T2
Length = 625
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 312 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 371
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 372 CYEYFHQDDIGHL 384
Score = 68 (29.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 36 AQRSVFIRLKCTLTS-KGRNVNVKAATYK--------VIHCTGHLVQNQTPASNGSTLME 86
A+RS F R+KC S K + + + K IH TG+L ++ P G
Sbjct: 243 ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKDRKSFCTIHSTGYL-KSWPPTKMGLDEDN 301
Query: 87 PQDN 90
DN
Sbjct: 302 EPDN 305
>UNIPROTKB|O88529 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10036 "Mesocricetus auratus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
Length = 626
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/65 (30%), Positives = 26/65 (40%)
Query: 36 AQRSVFIRLKCTLTSK-------GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLM 85
A+RS F R+KC S + K A K IH TG+L ++ P G
Sbjct: 243 ARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGLDED 301
Query: 86 EPQDN 90
DN
Sbjct: 302 NEPDN 306
>RGD|62003 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0032922 "circadian regulation of gene expression"
evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/65 (30%), Positives = 26/65 (40%)
Query: 36 AQRSVFIRLKCTLTSK-------GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLM 85
A+RS F R+KC S + K A K IH TG+L ++ P G
Sbjct: 243 ARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGLDED 301
Query: 86 EPQDN 90
DN
Sbjct: 302 SEPDN 306
>UNIPROTKB|Q9EPW1 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/65 (30%), Positives = 26/65 (40%)
Query: 36 AQRSVFIRLKCTLTSK-------GRNVNVKAATYK---VIHCTGHLVQNQTPASNGSTLM 85
A+RS F R+KC S + K A K IH TG+L ++ P G
Sbjct: 243 ARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYL-KSWPPTKMGLDED 301
Query: 86 EPQDN 90
DN
Sbjct: 302 SEPDN 306
>UNIPROTKB|O00327 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
"Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
Ensembl:ENST00000361003 Ensembl:ENST00000389707
Ensembl:ENST00000396441 Ensembl:ENST00000401424
Ensembl:ENST00000403290 Ensembl:ENST00000403482
Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
GermOnline:ENSG00000133794 Uniprot:O00327
Length = 626
Score = 103 (41.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 243 ARRSFFCRMKCNRPS 257
>UNIPROTKB|A0MLS5 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9796 "Equus caballus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
Uniprot:A0MLS5
Length = 626
Score = 103 (41.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 129 CFVAIGE----PIPHPANYDVPL-SQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAKS 183
C VAIG +P P N ++ + S ++++H++D KF + D+ L + P + S
Sbjct: 313 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
Query: 184 VFDFHHAQDSFHI 196
+++ H D H+
Sbjct: 373 CYEYFHQDDIGHL 385
Score = 68 (29.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHT 31
DL+GQS+++ HP D ++VK LS++ T
Sbjct: 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 36 AQRSVFIRLKCTLTS 50
A+RS F R+KC S
Sbjct: 243 ARRSFFCRMKCNRPS 257
>UNIPROTKB|F1NQL8 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00819869 EMBL:AADN02006684
Ensembl:ENSGALT00000037361 ArrayExpress:F1NQL8 Uniprot:F1NQL8
Length = 623
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/212 (22%), Positives = 92/212 (43%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTED----IRAQRSVFIRLKCTLTSKGRNVNV 57
+ L+GQS+++ HP D ++VK LS++ + + + + N
Sbjct: 204 QTSLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKTGLQVHTDFQAGPARLNSGA 263
Query: 58 KAATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVG 117
+ + + I C+ V+ + L P+ ++++ T + + P EVG
Sbjct: 264 RRSFFCRIKCSRTTVKEEKEC-----LPNPKKKVDHRKYCTIHCTGYMK---NWPPSEVG 315
Query: 118 -EKRRVVTEPS---HCFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKFTYADETME 169
E+ V + S +C VAIG P+ P ++ + T F+T+ ++D KF Y D+
Sbjct: 316 VEEENDVEKNSSNFNCLVAIGRLHPYIVPQKSGEIKVKATEFVTRFAMDGKFVYVDQRAT 375
Query: 170 DFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
LG+ P + S +++ H D H+ K
Sbjct: 376 AILGYLPQELLGTSCYEYCHQDDHNHLAEKHK 407
>RGD|1310040 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:1310040 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:CH473979 CTD:4861
KO:K09098 OMA:VYPHLQR OrthoDB:EOG4M0F1J IPI:IPI00373182
RefSeq:NP_001100949.1 UniGene:Rn.211375 Ensembl:ENSRNOT00000020855
GeneID:308387 KEGG:rno:308387 UCSC:RGD:1310040 NextBio:658741
Uniprot:D3ZJ66
Length = 595
Score = 102 (41.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 37 QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+RS F+R+K TLT +G +NVKA+ YKVIH TG L
Sbjct: 246 ERSFFVRMKSTLTKRG--LNVKASGYKVIHVTGRL 278
Score = 65 (27.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV 22
+V+L G S+++ HP DHSEV
Sbjct: 174 QVELTGSSVFDYIHPGDHSEV 194
>UNIPROTKB|Q8QGQ7 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048511 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P27540 HOVERGEN:HBG107503 EMBL:AF246958
IPI:IPI00819869 RefSeq:NP_989464.1 UniGene:Gga.2818
ProteinModelPortal:Q8QGQ7 GeneID:373925 KEGG:gga:373925 CTD:56938
eggNOG:NOG288887 KO:K09099 NextBio:20813457 Uniprot:Q8QGQ7
Length = 622
Score = 107 (42.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 112 PEEEVG-EKRRVVTEPS---HCFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKFTY 163
P EVG E+ V + S +C VAIG P+ P ++ + T F+T+ ++D KF Y
Sbjct: 309 PPSEVGVEEENDVEKNSSNFNCLVAIGRLHPYIVPQKSGEIKVKATEFVTRFAMDGKFVY 368
Query: 164 ADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
D+ LG+ P + S +++ H D H+ K
Sbjct: 369 VDQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHK 406
Score = 59 (25.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN 29
+ L+GQS+++ HP D ++VK LS++
Sbjct: 204 QTSLIGQSLFDYLHPKDVAKVKEQLSSS 231
>UNIPROTKB|E1C1C5 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AADN02006684 IPI:IPI00598933
Ensembl:ENSGALT00000022820 ArrayExpress:E1C1C5 Uniprot:E1C1C5
Length = 624
Score = 107 (42.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 112 PEEEVG-EKRRVVTEPS---HCFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKFTY 163
P EVG E+ V + S +C VAIG P+ P ++ + T F+T+ ++D KF Y
Sbjct: 309 PPSEVGVEEENDVEKNSSNFNCLVAIGRLHPYIVPQKSGEIKVKATEFVTRFAMDGKFVY 368
Query: 164 ADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
D+ LG+ P + S +++ H D H+ K
Sbjct: 369 VDQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHK 406
Score = 59 (25.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN 29
+ L+GQS+++ HP D ++VK LS++
Sbjct: 204 QTSLIGQSLFDYLHPKDVAKVKEQLSSS 231
>UNIPROTKB|E1B815 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:DAAA02047406 IPI:IPI00717601 RefSeq:NP_001179586.1
UniGene:Bt.109442 Ensembl:ENSBTAT00000020691 GeneID:528272
KEGG:bta:528272 NextBio:20874783 Uniprot:E1B815
Length = 587
Score = 99 (39.9 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 26 LSANHTEDIRA----QRSVFIRLKCTLTSKGRNVNVKAATYKVIHCTGHL 71
+ A+ TE R+ +RS FIR+K TLT +G ++VKA+ YKVIH TG L
Sbjct: 225 IEASPTEVSRSSRVQERSFFIRMKSTLTKRG--LHVKASGYKVIHVTGRL 272
Score = 65 (27.9 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 2 KVDLMGQSIYEVTHPCDHSEV 22
+V+L G S+++ HP DHSEV
Sbjct: 167 QVELTGSSVFDYIHPGDHSEV 187
Score = 36 (17.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 105 QDKDDSEPEEEVG 117
+D +DSE EE G
Sbjct: 470 EDPEDSEDEEPSG 482
>ZFIN|ZDB-GENE-001207-3 [details] [associations]
symbol:arnt2 "aryl hydrocarbon receptor nuclear
translocator 2" species:7955 "Danio rerio" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0048798 "swim bladder inflation" evidence=IMP]
[GO:0021591 "ventricular system development" evidence=IMP]
[GO:0072576 "liver morphogenesis" evidence=IMP] [GO:0003208
"cardiac ventricle morphogenesis" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] [GO:0021536 "diencephalon development" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-001207-3 GO:GO:0005737 GO:GO:0045893 GO:GO:0003677
GO:GO:0071542 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0016337 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0021591 GO:GO:0003208 GO:GO:0072576 GO:GO:0021979
EMBL:BX936312 EMBL:CABZ01029550 EMBL:CABZ01029551 EMBL:CABZ01029561
EMBL:CABZ01029562 EMBL:CABZ01029563 EMBL:CABZ01029564 EMBL:CU652843
EMBL:CU695017 EMBL:FP017235 EMBL:FP236184 IPI:IPI00504497
Ensembl:ENSDART00000129575 ArrayExpress:F1QVH4 Bgee:F1QVH4
GO:GO:0048798 Uniprot:F1QVH4
Length = 738
Score = 103 (41.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 128 HCFVAIG--EPIPHPANYDVP-LS--QTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+C VAIG + P + D+ LS FL++H+ D T+ D + +G+ P + K
Sbjct: 324 YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGYQPQDLLGK 383
Query: 183 SVFDFHHAQDSFHIQNAFK 201
+ +F H +D H++ +F+
Sbjct: 384 DILEFCHPEDQSHLRESFQ 402
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIE 92
A Y V+HCTG+ ++ PA G T+ P ++ E
Sbjct: 290 AQYSVVHCTGY-IKAWPPA--GMTI--PDEDTE 317
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 7 GQSIYEVTHPCDHSEVKSILSAN 29
G +++E HP D +++ LS +
Sbjct: 195 GSTLFEQVHPDDVDKLREQLSTS 217
>UNIPROTKB|F1SHH0 [details] [associations]
symbol:LOC100739785 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0042711 "maternal behavior" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 OMA:FENPKAA EMBL:CU467954
EMBL:CU468220 Ensembl:ENSSSCT00000002197 Uniprot:F1SHH0
Length = 650
Score = 85 (35.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 124 TEPSHCF--VAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
T PS V + +P P +V + F+T+ ++D+ Y + + D++ P +
Sbjct: 37 TVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIV 96
Query: 181 AKSVFDFHHAQD 192
K + F HA+D
Sbjct: 97 GKRCYHFIHAED 108
Score = 76 (31.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 44 LKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTL 84
+K TLT +G V++K++ YKVIH TG L + + S+G T+
Sbjct: 1 MKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRTV 38
>UNIPROTKB|F1PI90 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0042711 "maternal behavior"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0007626 GO:GO:0004871 GO:GO:0035176
SMART:SM00086 GeneTree:ENSGT00700000104038 GO:GO:0042711
EMBL:AAEX03005658 EMBL:AAEX03005657 Ensembl:ENSCAFT00000020917
Uniprot:F1PI90
Length = 657
Score = 85 (35.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 124 TEPSHCF--VAIGEPIPHPANYDVPLS-QTFLTKHSLDMKFTYADETMEDFLGFNPDIFI 180
T PS V + +P P +V + F+T+ ++D+ Y + + D++ P +
Sbjct: 37 TVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIV 96
Query: 181 AKSVFDFHHAQD 192
K + F HA+D
Sbjct: 97 GKRCYHFIHAED 108
Score = 76 (31.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 44 LKCTLTSKGRNVNVKAATYKVIHCTGHLVQNQTPASNGSTL 84
+K TLT +G V++K++ YKVIH TG L + + S+G T+
Sbjct: 1 MKSTLTKRG--VHIKSSGYKVIHITGRL-RLRVSLSHGRTV 38
>RGD|620230 [details] [associations]
symbol:Arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:10116 "Rattus norvegicus" [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IEP;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:620230 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 HOVERGEN:HBG107503 IPI:IPI00781061
EMBL:AF327071 UniGene:Rn.41612 ProteinModelPortal:Q924H3
Genevestigator:Q924H3 Uniprot:Q924H3
Length = 565
Score = 98 (39.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 113 EEEVGEKRRVVTEPSHCFVAIGEPIPH---PANYDVPLSQT-FLTKHSLDMKFTYADETM 168
E+E+G + + P C VA+G P+ P N + + F+T+ +++ KF Y D+
Sbjct: 265 EKEMGSGKD--SGPLTCLVAMGRLQPYTVPPKNGKINVRPAEFITRFAMNGKFVYVDQRA 322
Query: 169 EDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
LG+ P + S +++ H D ++ + K
Sbjct: 323 TAILGYLPQELLGTSCYEYFHQDDHSNLSDKHK 355
Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN 29
+ LMGQ++++ HP D ++VK LS +
Sbjct: 153 QASLMGQNLFDFLHPKDVAKVKEQLSCD 180
>UNIPROTKB|F1SG81 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0045944 GO:GO:0005667 GO:GO:0004871 GO:GO:0000982
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:IPQCNPM EMBL:CU633729
Ensembl:ENSSSCT00000000594 Uniprot:F1SG81
Length = 489
Score = 98 (39.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 110 SEPEEEVG-EKRRVVTEPSH---CFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKF 161
S P VG E+ R + S C VAIG P+ P N ++ + T F+T+ +++ KF
Sbjct: 215 SWPPNIVGMEEERDAKKDSRNFTCLVAIGRLHPYIVPQNSGEIQVKPTEFITRFAMNGKF 274
Query: 162 TYADETMED----FLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
Y D++++ LG+ P + S +++ H D ++ N K
Sbjct: 275 VYVDQSLKTRATAILGYLPQELLGTSCYEYFHQDDHSNLTNKHK 318
Score = 57 (25.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSAN 29
+ L GQS+++ HP D ++VK LS++
Sbjct: 112 QASLTGQSLFDFLHPKDVAKVKEQLSSS 139
>UNIPROTKB|F1PPH3 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0017162 "aryl
hydrocarbon receptor binding" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:VCMDMSG EMBL:AAEX03002373 EMBL:AAEX03002374 EMBL:AAEX03002375
Ensembl:ENSCAFT00000022111 Uniprot:F1PPH3
Length = 717
Score = 100 (40.3 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 128 HCFVAIG--EPIPHPANYDVP---LSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+C VAIG + P D+ + FL++H+ D T+ D +G+ P + K
Sbjct: 309 YCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGK 368
Query: 183 SVFDFHHAQDSFHIQNAFK 201
+ +F H++D H++ +F+
Sbjct: 369 DILEFCHSEDQSHLRESFQ 387
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNI 91
A Y V+HCTG+ ++ PA G T+ E ++
Sbjct: 275 AQYAVVHCTGY-IKAWPPA--GMTIPEEDADV 303
Score = 39 (18.8 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 7 GQSIYEVTHPCDHSEVKSIL 26
G ++YE HP D +++ L
Sbjct: 180 GSTLYEQVHPDDVEKLREQL 199
>FB|FBgn0023094 [details] [associations]
symbol:cyc "cycle" species:7227 "Drosophila melanogaster"
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=NAS;IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007623 "circadian rhythm"
evidence=NAS;TAS] [GO:0008062 "eclosion rhythm" evidence=NAS;TAS]
[GO:0045475 "locomotor rhythm" evidence=NAS;TAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045187
"regulation of circadian sleep/wake cycle, sleep" evidence=IMP;TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS;TAS] [GO:0007622 "rhythmic behavior" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
[GO:0042594 "response to starvation" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0042594 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0004871
GO:GO:0046982 GO:GO:0048148 GO:GO:0045475 GO:GO:0032922
SMART:SM00086 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K02296 GO:GO:0008062
EMBL:AF065473 EMBL:AF067206 EMBL:AF069998 EMBL:AY119284
EMBL:BT025197 RefSeq:NP_524168.2 UniGene:Dm.1004
ProteinModelPortal:O61734 SMR:O61734 IntAct:O61734
MINT:MINT-1328881 STRING:O61734 PRIDE:O61734
EnsemblMetazoa:FBtr0074924 GeneID:40162 KEGG:dme:Dmel_CG8727
CTD:40162 FlyBase:FBgn0023094 InParanoid:O61734 OMA:EQCPRER
OrthoDB:EOG46WWQT PhylomeDB:O61734 GenomeRNAi:40162 NextBio:817333
Bgee:O61734 GermOnline:CG8727 Uniprot:O61734
Length = 413
Score = 88 (36.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 104 IQDKD-DSEPEEEVGEKRRVVTEPSHCFVAIGEPIPHPANYDVPLSQT---------FLT 153
I+D+D D++ +E+ T S C VAIG P+ N VP S F++
Sbjct: 262 IKDEDQDADSDEQT-------TNLS-CLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFIS 313
Query: 154 KHSLDMKFTYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
+HS + KF + D+ +GF P + S +++ H +D + + K
Sbjct: 314 RHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHK 361
Score = 64 (27.6 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA 28
+ DL+GQS ++V HP D +VK LS+
Sbjct: 144 QADLLGQSWFDVLHPKDIGKVKEQLSS 170
>UNIPROTKB|E1BS65 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AADN02041540 EMBL:AADN02041541
EMBL:AADN02041542 EMBL:AADN02041543 IPI:IPI00575824
Ensembl:ENSGALT00000010398 ArrayExpress:E1BS65 Uniprot:E1BS65
Length = 704
Score = 99 (39.9 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 128 HCFVAIG--EPIPHPANYDV---PLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+C VAIG + P D+ + FL++H+ D T+ D +G+ P + K
Sbjct: 297 YCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGK 356
Query: 183 SVFDFHHAQDSFHIQNAFK 201
+ +F H +D H++ +F+
Sbjct: 357 DILEFCHPEDQSHLRESFQ 375
Score = 52 (23.4 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNI 91
A Y V+HCTG+ ++ PA G T+ E ++
Sbjct: 263 AQYAVVHCTGY-IKAWPPA--GMTIPEEDADV 291
Score = 39 (18.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 7 GQSIYEVTHPCDHSEVKSIL 26
G ++YE HP D +++ L
Sbjct: 168 GSTLYEQVHPDDVEKLREQL 187
>UNIPROTKB|E1BS64 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:VCMDMSG EMBL:AADN02041540 EMBL:AADN02041541 EMBL:AADN02041542
EMBL:AADN02041543 IPI:IPI00587220 Ensembl:ENSGALT00000010400
ArrayExpress:E1BS64 Uniprot:E1BS64
Length = 725
Score = 99 (39.9 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 128 HCFVAIG--EPIPHPANYDV---PLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+C VAIG + P D+ + FL++H+ D T+ D +G+ P + K
Sbjct: 312 YCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGVITFVDPRCISVIGYQPQDLLGK 371
Query: 183 SVFDFHHAQDSFHIQNAFK 201
+ +F H +D H++ +F+
Sbjct: 372 DILEFCHPEDQSHLRESFQ 390
Score = 52 (23.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNI 91
A Y V+HCTG+ ++ PA G T+ E ++
Sbjct: 278 AQYAVVHCTGY-IKAWPPA--GMTIPEEDADV 306
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 7 GQSIYEVTHPCDHSEVKSIL 26
G ++YE HP D +++ L
Sbjct: 183 GSTLYEQVHPDDVEKLREQL 202
>FB|FBgn0023076 [details] [associations]
symbol:Clk "Clock" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;NAS;TAS]
[GO:0007623 "circadian rhythm" evidence=NAS;IMP;TAS] [GO:0046982
"protein heterodimerization activity" evidence=NAS;IPI] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=NAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045475
"locomotor rhythm" evidence=IMP;NAS;TAS] [GO:0008062 "eclosion
rhythm" evidence=NAS;TAS] [GO:0045187 "regulation of circadian
sleep/wake cycle, sleep" evidence=IMP] [GO:0007622 "rhythmic
behavior" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IDA;NAS;TAS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0032922
"circadian regulation of gene expression" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 GO:GO:0046982
GO:GO:0048148 GO:GO:0045475 GO:GO:0032922 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG300360 KO:K02223 EMBL:AF065133 EMBL:AF069997
EMBL:AF067207 PIR:T13062 PIR:T13068 PIR:T13071
RefSeq:NP_001014574.1 RefSeq:NP_001014576.1 RefSeq:NP_523964.2
UniGene:Dm.7596 ProteinModelPortal:O61735 SMR:O61735 IntAct:O61735
MINT:MINT-7025605 STRING:O61735 PaxDb:O61735
EnsemblMetazoa:FBtr0100132 GeneID:38872 KEGG:dme:Dmel_CG7391
UCSC:CG7391-RA CTD:363233 FlyBase:FBgn0023076 InParanoid:O61735
OMA:IVACHEE OrthoDB:EOG4HHMHD PhylomeDB:O61735 GenomeRNAi:38872
NextBio:810786 Bgee:O61735 GermOnline:CG7391 GO:GO:0008062
Uniprot:O61735
Length = 1027
Score = 116 (45.9 bits), Expect = 0.00052, P = 0.00052
Identities = 47/193 (24%), Positives = 82/193 (42%)
Query: 4 DLMGQSIYEVTHPCDHSEVKSILSANHTEDIRA-QRSVFIRLKCTLTS---KGRNVNVKA 59
DL +IY++ + DH + +I N T I Q + + T + +G V A
Sbjct: 129 DLYNMTIYDLAYEMDHEALLNIFM-NPTPVIEPRQTDISSSNQITFYTHLRRGGMEKVDA 187
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNIENQSDNTRRGSAIQDKDDSEPEEEVGEK 119
Y+++ G+ +N T S GS+ + N S+ + + + P EV +K
Sbjct: 188 NAYELVKFVGYF-RNDTNTSTGSS-----SEVSNGSNG--QPAVLPRIFQQNPNAEV-DK 238
Query: 120 RRVVTEPSHCFVAIGEPIPHPANYDVPLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIF 179
+ V V + I + D P S F +KHS++ KF + D +G+ P
Sbjct: 239 KLVFVGTGR--VQNPQLIREMSIID-PTSNEFTSKHSMEWKFLFLDHRAPPIIGYMPFEV 295
Query: 180 IAKSVFDFHHAQD 192
+ S +D++H D
Sbjct: 296 LGTSGYDYYHFDD 308
>UNIPROTKB|F1N4Q7 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0045944 GO:GO:0005667 GO:GO:0004871 GO:GO:0000982
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:IPQCNPM EMBL:DAAA02014003
IPI:IPI00837789 Ensembl:ENSBTAT00000043261 Uniprot:F1N4Q7
Length = 629
Score = 92 (37.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 129 CFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKFTYADETMED----FLGFNPDIFI 180
C VA+G PH P N ++ + T F+T+ +++ KF Y D++ + LG+ P +
Sbjct: 335 CLVAVGRLQPHIVPQNSGEIKVKPTEFITRFAVNGKFVYVDQSFKTRATAILGYLPQELL 394
Query: 181 AKSVFDFHHAQDSFHIQNAFK 201
S +++ H D ++ + K
Sbjct: 395 GTSCYEYFHQDDHSNLTDKHK 415
Score = 63 (27.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSANHTEDIRAQRSVFIRLKCTL 48
+ L+GQS+++ HP D S+VK LS++ DI + R I K L
Sbjct: 209 QASLIGQSLFDFLHPKDVSKVKEQLSSS---DI-SPREKLIDAKAAL 251
Score = 61 (26.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 36 AQRSVFIRLK-CTLTSKGRNV---NVKAATYK---VIHCTGHLVQNQTPASNGSTLMEPQ 88
++RS F R+K C ++ K + N K ++ +HCTG+L ++ P N + + E +
Sbjct: 268 SRRSFFCRIKSCKISVKEEHEYLPNSKKKDHRKFCTVHCTGYL-RSWPP--NIAGMEEER 324
Query: 89 DNIENQSDNT 98
DN +++S+ T
Sbjct: 325 DNKKDRSNFT 334
>UNIPROTKB|H0Y5R1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC068794
EMBL:AC092829 HGNC:HGNC:18984 Ensembl:ENST00000457040
Uniprot:H0Y5R1
Length = 588
Score = 97 (39.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 110 SEPEEEVG--EKRRVVTEPSH--CFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKF 161
S P VG E+R + S+ C VAIG P+ P N ++ + T F+T+ +++ KF
Sbjct: 274 SWPPNIVGMEEERNSKKDNSNFTCLVAIGRLQPYIVPQNSGEINVKPTEFITRFAVNGKF 333
Query: 162 TYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
Y D+ LG+ P + S +++ H D ++ + K
Sbjct: 334 VYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHK 373
Score = 56 (24.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA 28
+ L GQS+++ HP D ++VK LS+
Sbjct: 171 QASLTGQSLFDFLHPKDVAKVKEQLSS 197
>MGI|MGI:107188 [details] [associations]
symbol:Arnt2 "aryl hydrocarbon receptor nuclear translocator
2" species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=ISO;TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;NAS] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009410 "response to xenobiotic
stimulus" evidence=TAS] [GO:0009636 "response to toxic substance"
evidence=TAS] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:107188 GO:GO:0005737
GO:GO:0007165 GO:GO:0043066 GO:GO:0032355 GO:GO:0003677
GO:GO:0008284 GO:GO:0009636 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:9915
HOGENOM:HOG000234380 HOVERGEN:HBG000164 KO:K15589 OMA:VCMDMSG
OrthoDB:EOG4K3KVQ EMBL:D63644 EMBL:AB093225 EMBL:BC054546
IPI:IPI00403978 IPI:IPI00828407 RefSeq:NP_031514.2 UniGene:Mm.38594
ProteinModelPortal:Q61324 SMR:Q61324 IntAct:Q61324 STRING:Q61324
PhosphoSite:Q61324 PRIDE:Q61324 Ensembl:ENSMUST00000085077
GeneID:11864 KEGG:mmu:11864 UCSC:uc009ief.1 UCSC:uc009ieh.1
InParanoid:Q61324 NextBio:279871 Bgee:Q61324 CleanEx:MM_ARNT2
Genevestigator:Q61324 GermOnline:ENSMUSG00000015709 Uniprot:Q61324
Length = 712
Score = 98 (39.6 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 128 HCFVAIG--EPIPHPANYDVP---LSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+C VAIG + P D+ + FL++H+ D T+ D +G+ P + K
Sbjct: 309 YCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGK 368
Query: 183 SVFDFHHAQDSFHIQNAFK 201
+ +F H +D H++ +F+
Sbjct: 369 DILEFCHPEDQSHLRESFQ 387
Score = 52 (23.4 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNI 91
A Y V+HCTG+ ++ PA G T+ E ++
Sbjct: 275 AQYAVVHCTGY-IKAWPPA--GMTIPEEDADV 303
Score = 39 (18.8 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 7 GQSIYEVTHPCDHSEVKSIL 26
G ++YE HP D +++ L
Sbjct: 180 GSTLYEQVHPDDVEKLREQL 199
>UNIPROTKB|Q9HBZ2 [details] [associations]
symbol:ARNT2 "Aryl hydrocarbon receptor nuclear
translocator 2" species:9606 "Homo sapiens" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS;IPI] [GO:0007417 "central
nervous system development" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0017162 "aryl
hydrocarbon receptor binding" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0043066 GO:GO:0032355
GO:GO:0003677 GO:GO:0008284 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 EMBL:CH471136 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF185610 EMBL:AF185593
EMBL:AF185594 EMBL:AF185595 EMBL:AF185596 EMBL:AF185597
EMBL:AF185598 EMBL:AF185599 EMBL:AF185600 EMBL:AF185601
EMBL:AF185602 EMBL:AF185603 EMBL:AF185604 EMBL:AF185605
EMBL:AF185606 EMBL:AF185607 EMBL:AF185608 EMBL:AF185609
EMBL:AB002305 EMBL:AK295763 EMBL:BX647212 EMBL:BC036099
IPI:IPI00478506 IPI:IPI00796054 RefSeq:NP_055677.3
UniGene:Hs.459070 ProteinModelPortal:Q9HBZ2 SMR:Q9HBZ2
IntAct:Q9HBZ2 MINT:MINT-2867815 STRING:Q9HBZ2 PhosphoSite:Q9HBZ2
DMDM:125987793 PRIDE:Q9HBZ2 DNASU:9915 Ensembl:ENST00000303329
Ensembl:ENST00000527771 Ensembl:ENST00000533983 GeneID:9915
KEGG:hsa:9915 UCSC:uc002bfr.3 CTD:9915 GeneCards:GC15P080696
H-InvDB:HIX0012493 HGNC:HGNC:16876 HPA:CAB005081 HPA:HPA001056
MIM:606036 neXtProt:NX_Q9HBZ2 PharmGKB:PA24995 HOGENOM:HOG000234380
HOVERGEN:HBG000164 InParanoid:Q9HBZ2 KO:K15589 OMA:VCMDMSG
OrthoDB:EOG4K3KVQ ChiTaRS:ARNT2 GenomeRNAi:9915 NextBio:37404
ArrayExpress:Q9HBZ2 Bgee:Q9HBZ2 CleanEx:HS_ARNT2
Genevestigator:Q9HBZ2 GermOnline:ENSG00000172379 GO:GO:0017162
Uniprot:Q9HBZ2
Length = 717
Score = 98 (39.6 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 128 HCFVAIG--EPIPHPANYDV---PLSQTFLTKHSLDMKFTYADETMEDFLGFNPDIFIAK 182
+C VAIG + P D+ + FL++H+ D T+ D +G+ P + K
Sbjct: 309 YCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGK 368
Query: 183 SVFDFHHAQDSFHIQNAFK 201
+ +F H +D H++ +F+
Sbjct: 369 DILEFCHPEDQSHLRESFQ 387
Score = 52 (23.4 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 60 ATYKVIHCTGHLVQNQTPASNGSTLMEPQDNI 91
A Y V+HCTG+ ++ PA G T+ E ++
Sbjct: 275 AQYAVVHCTGY-IKAWPPA--GMTIPEEDADV 303
Score = 39 (18.8 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 7 GQSIYEVTHPCDHSEVKSIL 26
G ++YE HP D +++ L
Sbjct: 180 GSTLYEQVHPDDVEKLREQL 199
>UNIPROTKB|Q8WYA1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0009649 "entrainment of circadian clock"
evidence=NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007623 "circadian
rhythm" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0009649 GO:GO:0007623 GO:GO:0045944
GO:GO:0005667 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG107503 CTD:56938 eggNOG:NOG288887 KO:K09099
EMBL:AB039921 EMBL:AF256215 EMBL:AF231338 EMBL:AF231339
EMBL:AF246960 EMBL:AF246961 EMBL:AF246962 EMBL:AF246963
EMBL:AK296706 EMBL:AC068794 EMBL:AC092829 EMBL:BC000172
EMBL:BC125061 EMBL:BC125062 IPI:IPI00142781 IPI:IPI00163662
IPI:IPI00465306 IPI:IPI00788724 IPI:IPI00789255 IPI:IPI00795339
IPI:IPI00827866 IPI:IPI00827897 IPI:IPI01009213
RefSeq:NP_001234931.1 RefSeq:NP_001234932.1 RefSeq:NP_001234933.1
RefSeq:NP_001234934.1 RefSeq:NP_064568.3 UniGene:Hs.434269
UniGene:Hs.445447 PDB:2KDK PDBsum:2KDK ProteinModelPortal:Q8WYA1
SMR:Q8WYA1 IntAct:Q8WYA1 STRING:Q8WYA1 PhosphoSite:Q8WYA1
DMDM:124007121 PaxDb:Q8WYA1 PRIDE:Q8WYA1 Ensembl:ENST00000261178
Ensembl:ENST00000266503 Ensembl:ENST00000311001
Ensembl:ENST00000395901 Ensembl:ENST00000542388
Ensembl:ENST00000544915 Ensembl:ENST00000546179 GeneID:56938
KEGG:hsa:56938 UCSC:uc001rht.2 UCSC:uc001rhu.2 UCSC:uc001rhv.2
UCSC:uc001rhw.3 UCSC:uc009zji.2 GeneCards:GC12P027485
H-InvDB:HIX0037110 HGNC:HGNC:18984 MIM:614517 neXtProt:NX_Q8WYA1
PharmGKB:PA134896555 InParanoid:Q8WYA1 OMA:IPQCNPM PhylomeDB:Q8WYA1
GenomeRNAi:56938 NextBio:62501 ArrayExpress:Q8WYA1 Bgee:Q8WYA1
CleanEx:HS_ARNTL2 Genevestigator:Q8WYA1 Uniprot:Q8WYA1
Length = 636
Score = 97 (39.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 110 SEPEEEVG--EKRRVVTEPSH--CFVAIGEPIPH--PANY-DVPLSQT-FLTKHSLDMKF 161
S P VG E+R + S+ C VAIG P+ P N ++ + T F+T+ +++ KF
Sbjct: 322 SWPPNIVGMEEERNSKKDNSNFTCLVAIGRLQPYIVPQNSGEINVKPTEFITRFAVNGKF 381
Query: 162 TYADETMEDFLGFNPDIFIAKSVFDFHHAQDSFHIQNAFK 201
Y D+ LG+ P + S +++ H D ++ + K
Sbjct: 382 VYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHK 421
Score = 56 (24.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 2 KVDLMGQSIYEVTHPCDHSEVKSILSA 28
+ L GQS+++ HP D ++VK LS+
Sbjct: 219 QASLTGQSLFDFLHPKDVAKVKEQLSS 245
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 211 211 0.00081 112 3 11 22 0.38 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 116
No. of states in DFA: 576 (61 KB)
Total size of DFA: 173 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.76u 0.09s 22.85t Elapsed: 00:00:23
Total cpu time: 22.78u 0.09s 22.87t Elapsed: 00:00:23
Start: Thu Aug 15 12:36:26 2013 End: Thu Aug 15 12:36:49 2013
WARNINGS ISSUED: 1