Your job contains 1 sequence.
>psy10707
LSPSLVKHFSTTQVQHDAAVHSKSDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALV
VSIVMHSHWGIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEG
TKKLWAIKSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10707
(130 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039112 - symbol:CG10219 species:7227 "Drosophila ... 325 2.7e-29 1
UNIPROTKB|A8WT26 - symbol:sdhd-1 "Putative succinate dehy... 216 9.5e-18 1
UNIPROTKB|Q6AZR3 - symbol:sdhd-a "Succinate dehydrogenase... 203 2.3e-16 1
WB|WBGene00009353 - symbol:sdhd-1 species:6239 "Caenorhab... 203 2.3e-16 1
UNIPROTKB|O62215 - symbol:sdhd-1 "Putative succinate dehy... 203 2.3e-16 1
UNIPROTKB|Q6P355 - symbol:sdhd "Succinate dehydrogenase [... 201 3.7e-16 1
UNIPROTKB|Q6AZV0 - symbol:sdhd-b "Succinate dehydrogenase... 195 1.6e-15 1
UNIPROTKB|Q5ZIS0 - symbol:SDHD "Succinate dehydrogenase [... 188 8.8e-15 1
UNIPROTKB|F1NKK6 - symbol:SDHD "Succinate dehydrogenase [... 187 1.1e-14 1
UNIPROTKB|Q95123 - symbol:SDHD "Succinate dehydrogenase [... 186 1.4e-14 1
UNIPROTKB|A5GZW8 - symbol:SDHD "Succinate dehydrogenase [... 186 1.4e-14 1
UNIPROTKB|Q5G2C6 - symbol:SDHD "Succinate dehydrogenase [... 186 1.4e-14 1
UNIPROTKB|F1SMA9 - symbol:SDHD "Succinate dehydrogenase [... 182 3.8e-14 1
UNIPROTKB|O14521 - symbol:SDHD "Succinate dehydrogenase [... 181 4.9e-14 1
UNIPROTKB|P92507 - symbol:P92507 "Succinate dehydrogenase... 181 4.9e-14 1
ZFIN|ZDB-GENE-040822-17 - symbol:sdhdb "succinate dehydro... 181 4.9e-14 1
UNIPROTKB|Q5RC29 - symbol:SDHD "Succinate dehydrogenase [... 174 2.7e-13 1
MGI|MGI:1914175 - symbol:Sdhd "succinate dehydrogenase co... 174 2.7e-13 1
UNIPROTKB|E9PIC0 - symbol:SDHD "Succinate dehydrogenase [... 173 3.4e-13 1
RGD|735231 - symbol:Sdhd "succinate dehydrogenase complex... 172 4.4e-13 1
ZFIN|ZDB-GENE-040718-192 - symbol:sdhda "succinate dehydr... 172 4.4e-13 1
POMBASE|SPBP23A10.16 - symbol:sdh4 "TIM22 inner membrane ... 132 7.6e-09 1
UNIPROTKB|E9PIG3 - symbol:SDHD "Succinate dehydrogenase [... 127 2.6e-08 1
UNIPROTKB|H0YD96 - symbol:SDHD "Succinate dehydrogenase [... 117 2.9e-07 1
UNIPROTKB|G3V173 - symbol:SDHD "Succinate dehydrogenase [... 111 1.3e-06 1
UNIPROTKB|H0YD41 - symbol:SDHD "Succinate dehydrogenase [... 111 1.3e-06 1
UNIPROTKB|H3BRW5 - symbol:H3BRW5 "Uncharacterized protein... 111 1.3e-06 1
SGD|S000004154 - symbol:SHH4 "Mitochondrial inner membran... 111 1.3e-06 1
UNIPROTKB|Q7SGY6 - symbol:B18P24.060 "Succinate dehydroge... 109 2.1e-06 1
ASPGD|ASPL0000061387 - symbol:AN0896 species:162425 "Emer... 107 3.4e-06 1
UNIPROTKB|E9PK73 - symbol:SDHD "Succinate dehydrogenase [... 103 9.0e-06 1
>FB|FBgn0039112 [details] [associations]
symbol:CG10219 species:7227 "Drosophila melanogaster"
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223 EMBL:AE014297
GO:GO:0016021 GO:GO:0005506 GO:GO:0006099 GO:GO:0020037
GO:GO:0005749 GO:GO:0000104 GO:GO:0006121 GO:GO:0048039
eggNOG:NOG264646 GeneTree:ENSGT00390000010003 KO:K00237
PANTHER:PTHR13337 EMBL:AY071388 EMBL:AY071617 RefSeq:NP_651181.1
UniGene:Dm.6640 ProteinModelPortal:Q9VCI5 SMR:Q9VCI5 IntAct:Q9VCI5
MINT:MINT-284181 STRING:Q9VCI5 PRIDE:Q9VCI5
EnsemblMetazoa:FBtr0084466 GeneID:42808 KEGG:dme:Dmel_CG10219
UCSC:CG10219-RA FlyBase:FBgn0039112 InParanoid:Q9VCI5 OMA:HWGVEAM
OrthoDB:EOG46WWRR PhylomeDB:Q9VCI5 GenomeRNAi:42808 NextBio:830677
Bgee:Q9VCI5 GermOnline:CG10219 Uniprot:Q9VCI5
Length = 182
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 58/107 (54%), Positives = 78/107 (72%)
Query: 24 SDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYARPEV 83
S HT LWT+ER +SAGLLAVIPAA++ PS L+ + +S+V+H+HWG+EA+VVDY RP V
Sbjct: 71 SSHTLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVDYMRPSV 130
Query: 84 VGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAIKSK 130
VG L K+ H+++ I+S+ TL GL I N G+ G K+ WAIK K
Sbjct: 131 VGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIKRFWAIKGK 177
>UNIPROTKB|A8WT26 [details] [associations]
symbol:sdhd-1 "Putative succinate dehydrogenase
[ubiquinone] cytochrome b small subunit, mitochondrial"
species:6238 "Caenorhabditis briggsae" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS] [GO:0020037 "heme
binding" evidence=ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223
GO:GO:0016021 GO:GO:0005506 GO:GO:0006099 GO:GO:0020037
EMBL:HE601438 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
eggNOG:NOG264646 HOGENOM:HOG000290645 KO:K00237 OMA:KLERLWA
PANTHER:PTHR13337 RefSeq:XP_002631189.1 ProteinModelPortal:A8WT26
STRING:A8WT26 EnsemblMetazoa:CBG02978 GeneID:8572703
KEGG:cbr:CBG02978 CTD:8572703 WormBase:CBG02978 Uniprot:A8WT26
Length = 145
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 43/127 (33%), Positives = 75/127 (59%)
Query: 2 SPSLVKHFSTTQVQHDAAVHSK-SDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALV 60
+P L T +D A SK DH+ + +ER + G+L ++PA+Y + ++ L
Sbjct: 21 APRLSTIVRATSTLNDGA--SKVPDHSMHFKLERLWAVGMLPILPASYFIHGPVMDAVLT 78
Query: 61 VSIVMHSHWGIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEG 120
V++ +H HWGI +V DYARP V+G A AK H+ VY+++ + LAGL++ N G+ +
Sbjct: 79 VALTLHIHWGIHGVVYDYARPYVIGEAAAKAAHIGVYLITGLLLAGLLHFNTNDVGITKA 138
Query: 121 TKKLWAI 127
+ ++++
Sbjct: 139 FELVFSL 145
>UNIPROTKB|Q6AZR3 [details] [associations]
symbol:sdhd-a "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit A, mitochondrial" species:8355 "Xenopus
laevis" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0048039
"ubiquinone binding" evidence=ISS] InterPro:IPR007992 Pfam:PF05328
GO:GO:0016021 GO:GO:0005506 GO:GO:0006099 GO:GO:0020037
GO:GO:0005749 GO:GO:0006121 GO:GO:0048039 HSSP:Q5ZIS0
HOVERGEN:HBG003003 KO:K00237 PANTHER:PTHR13337 EMBL:BC077454
RefSeq:NP_001087943.1 UniGene:Xl.33442 ProteinModelPortal:Q6AZR3
SMR:Q6AZR3 GeneID:494586 KEGG:xla:494586 CTD:494586
Xenbase:XB-GENE-6255924 Uniprot:Q6AZR3
Length = 152
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 11 TTQVQHDAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
T+Q+ H+ S +L WT ER LS LL ++PAAYL P A++Y+L ++ +H HW
Sbjct: 39 TSQIHTSQNHHAASKAASLHWTSERALSVALLGLLPAAYLYPGAAVDYSLAAALTLHGHW 98
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
G+ +V DY V G A K+ + S++ LS +T AGL + G+ + LW++
Sbjct: 99 GLGQVVTDY----VHGDAKIKLANTSLFALSALTFAGLCYFNYHDVGICKAVAMLWSL 152
>WB|WBGene00009353 [details] [associations]
symbol:sdhd-1 species:6239 "Caenorhabditis elegans"
[GO:0005506 "iron ion binding" evidence=IEA] [GO:0005740
"mitochondrial envelope" evidence=IEA] [GO:0006099 "tricarboxylic
acid cycle" evidence=IEA] [GO:0006121 "mitochondrial electron
transport, succinate to ubiquinone" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0005506 GO:GO:0006099 GO:GO:0020037 GO:GO:0005749
GO:GO:0006121 GO:GO:0048039 EMBL:Z81525 eggNOG:NOG264646
GeneTree:ENSGT00390000010003 HOGENOM:HOG000290645 KO:K00237
OMA:KLERLWA PANTHER:PTHR13337 PIR:T21691 RefSeq:NP_496369.1
ProteinModelPortal:O62215 SMR:O62215 IntAct:O62215 STRING:O62215
PaxDb:O62215 EnsemblMetazoa:F33A8.5.1 EnsemblMetazoa:F33A8.5.2
EnsemblMetazoa:F33A8.5.3 GeneID:174692 KEGG:cel:CELE_F33A8.5
CTD:174692 WormBase:F33A8.5 InParanoid:O62215 NextBio:885090
Uniprot:O62215
Length = 145
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/127 (31%), Positives = 73/127 (57%)
Query: 2 SPSLVKHFSTTQVQHDAAVHSK-SDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALV 60
+P + T +D A SK DH+ + +ER + G+L ++PA+Y + ++ L
Sbjct: 21 APRISTIVRATSTLNDGA--SKVPDHSMHFKLERLWAVGMLPILPASYFIHGPVMDAVLT 78
Query: 61 VSIVMHSHWGIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEG 120
V++ +H HWGI +V DYARP V+G A AK H+ VY+++ + L L++ N G+ +
Sbjct: 79 VALTLHIHWGIHGVVYDYARPYVIGEAAAKAAHVGVYLITGLLLGALLHFNTNDVGITKA 138
Query: 121 TKKLWAI 127
+ ++++
Sbjct: 139 FELVFSL 145
>UNIPROTKB|O62215 [details] [associations]
symbol:sdhd-1 "Putative succinate dehydrogenase
[ubiquinone] cytochrome b small subunit, mitochondrial"
species:6239 "Caenorhabditis elegans" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS] [GO:0020037 "heme
binding" evidence=ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223
GO:GO:0016021 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005506 GO:GO:0006099 GO:GO:0020037
GO:GO:0005749 GO:GO:0006121 GO:GO:0048039 EMBL:Z81525
eggNOG:NOG264646 GeneTree:ENSGT00390000010003 HOGENOM:HOG000290645
KO:K00237 OMA:KLERLWA PANTHER:PTHR13337 PIR:T21691
RefSeq:NP_496369.1 ProteinModelPortal:O62215 SMR:O62215
IntAct:O62215 STRING:O62215 PaxDb:O62215 EnsemblMetazoa:F33A8.5.1
EnsemblMetazoa:F33A8.5.2 EnsemblMetazoa:F33A8.5.3 GeneID:174692
KEGG:cel:CELE_F33A8.5 CTD:174692 WormBase:F33A8.5 InParanoid:O62215
NextBio:885090 Uniprot:O62215
Length = 145
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/127 (31%), Positives = 73/127 (57%)
Query: 2 SPSLVKHFSTTQVQHDAAVHSK-SDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALV 60
+P + T +D A SK DH+ + +ER + G+L ++PA+Y + ++ L
Sbjct: 21 APRISTIVRATSTLNDGA--SKVPDHSMHFKLERLWAVGMLPILPASYFIHGPVMDAVLT 78
Query: 61 VSIVMHSHWGIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEG 120
V++ +H HWGI +V DYARP V+G A AK H+ VY+++ + L L++ N G+ +
Sbjct: 79 VALTLHIHWGIHGVVYDYARPYVIGEAAAKAAHVGVYLITGLLLGALLHFNTNDVGITKA 138
Query: 121 TKKLWAI 127
+ ++++
Sbjct: 139 FELVFSL 145
>UNIPROTKB|Q6P355 [details] [associations]
symbol:sdhd "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0020037 "heme binding" evidence=ISS]
[GO:0048039 "ubiquinone binding" evidence=ISS] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039 HSSP:Q5ZIS0
eggNOG:NOG264646 GeneTree:ENSGT00390000010003 HOGENOM:HOG000290645
HOVERGEN:HBG003003 KO:K00237 OrthoDB:EOG4STS5Z PANTHER:PTHR13337
CTD:6392 EMBL:CR848414 EMBL:BC064178 RefSeq:NP_989357.1
UniGene:Str.27285 ProteinModelPortal:Q6P355 SMR:Q6P355
STRING:Q6P355 Ensembl:ENSXETT00000057629 GeneID:394986
KEGG:xtr:394986 Xenbase:XB-GENE-5855162 InParanoid:Q6P355
OMA:CRANRAS Bgee:Q6P355 Uniprot:Q6P355
Length = 152
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 42/118 (35%), Positives = 67/118 (56%)
Query: 11 TTQVQHDAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
T+Q+ H+ S ++ WT ER LS LL ++PAAYL P A++Y+L ++ +H HW
Sbjct: 39 TSQIHTSPNHHAGSKAASMHWTSERALSVALLGLLPAAYLYPGAAMDYSLAAALTLHGHW 98
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
G+ +V DY V G A K+ + S++ LS +T AGL + G+ + LW++
Sbjct: 99 GLGQVVTDY----VHGDAKIKMANTSLFALSALTFAGLCYFNYHDVGICKAVSMLWSL 152
>UNIPROTKB|Q6AZV0 [details] [associations]
symbol:sdhd-b "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit B, mitochondrial" species:8355 "Xenopus
laevis" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0048039
"ubiquinone binding" evidence=ISS] InterPro:IPR007992 Pfam:PF05328
GO:GO:0016021 GO:GO:0005506 GO:GO:0006099 GO:GO:0020037
GO:GO:0005749 GO:GO:0006121 GO:GO:0048039 HSSP:Q5ZIS0
HOVERGEN:HBG003003 KO:K00237 PANTHER:PTHR13337 EMBL:BC077199
RefSeq:NP_001088989.1 UniGene:Xl.24286 ProteinModelPortal:Q6AZV0
SMR:Q6AZV0 GeneID:496372 KEGG:xla:496372 CTD:496372
Xenbase:XB-GENE-5855323 Uniprot:Q6AZV0
Length = 152
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 41/118 (34%), Positives = 66/118 (55%)
Query: 11 TTQVQHDAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
T+Q+ H+ S ++ WT ER LS LL ++PAAYL P A++Y+L ++ +H HW
Sbjct: 39 TSQIHTSPNHHAGSKAASMHWTGERALSVALLGLLPAAYLYPGAAMDYSLAAALTLHGHW 98
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
G+ +V DY V G K+ + S++ LS +T AGL + G+ + LW++
Sbjct: 99 GLGQVVTDY----VHGETKIKMANTSLFALSALTFAGLCYFNYHDVGICKAVAMLWSL 152
>UNIPROTKB|Q5ZIS0 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA] [GO:0020037 "heme binding" evidence=ISS]
[GO:0048039 "ubiquinone binding" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223 GO:GO:0016021
GO:GO:0005506 GO:GO:0006099 GO:GO:0020037 GO:GO:0005749
GO:GO:0006121 GO:GO:0048039 PDB:1YQ3 PDB:1YQ4 PDB:2FBW PDB:2H88
PDB:2H89 PDB:2WQY PDBsum:1YQ3 PDBsum:1YQ4 PDBsum:2FBW PDBsum:2H88
PDBsum:2H89 PDBsum:2WQY eggNOG:NOG264646 HOGENOM:HOG000290645
HOVERGEN:HBG003003 KO:K00237 OrthoDB:EOG4STS5Z PANTHER:PTHR13337
CTD:6392 EMBL:AJ720714 IPI:IPI00580676 RefSeq:NP_001006321.1
UniGene:Gga.34318 ProteinModelPortal:Q5ZIS0 SMR:Q5ZIS0
STRING:Q5ZIS0 GeneID:419793 KEGG:gga:419793 InParanoid:Q5ZIS0
EvolutionaryTrace:Q5ZIS0 NextBio:20822796 Uniprot:Q5ZIS0
Length = 157
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 40/108 (37%), Positives = 60/108 (55%)
Query: 21 HSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYA 79
H S +L WT ER +SA LL ++PAAYL P A++Y+L ++ +H HWG+ ++ DY
Sbjct: 54 HGSSKAASLHWTSERAVSALLLGLLPAAYLYPGPAVDYSLAAALTLHGHWGLGQVITDY- 112
Query: 80 RPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
V G K+ + +Y+LS IT GL G+ + LW+I
Sbjct: 113 ---VHGDTPIKVANTGLYVLSAITFTGLCYFNYYDVGICKAVAMLWSI 157
>UNIPROTKB|F1NKK6 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9031 "Gallus
gallus" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005740 GO:GO:0006121
GeneTree:ENSGT00390000010003 PANTHER:PTHR13337 OMA:LTLHSHW
IPI:IPI00580676 EMBL:AADN02058014 Ensembl:ENSGALT00000012795
Uniprot:F1NKK6
Length = 157
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 40/108 (37%), Positives = 60/108 (55%)
Query: 21 HSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYA 79
H S +L WT ER +SA LL ++PAAYL P A++Y+L ++ +H HWG+ ++ DY
Sbjct: 54 HGTSKAASLHWTSERAVSALLLGLLPAAYLYPGPAVDYSLAAALTLHGHWGLGQVITDY- 112
Query: 80 RPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
V G K+ + +Y+LS IT GL G+ + LW+I
Sbjct: 113 ---VHGDTPIKVANTGLYVLSAITFTGLCYFNYYDVGICKAVAMLWSI 157
>UNIPROTKB|Q95123 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9913 "Bos
taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=ISS;TAS] [GO:0005749 "mitochondrial respiratory chain
complex II" evidence=ISS] [GO:0020037 "heme binding" evidence=ISS]
[GO:0048039 "ubiquinone binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
Reactome:REACT_115420 InterPro:IPR007992 Pfam:PF05328 GO:GO:0016021
GO:GO:0005506 GO:GO:0006099 GO:GO:0020037 GO:GO:0005749
GO:GO:0006121 GO:GO:0048039 GeneTree:ENSGT00390000010003
HOVERGEN:HBG003003 KO:K00237 OrthoDB:EOG4STS5Z PANTHER:PTHR13337
EMBL:U50987 EMBL:AY770191 EMBL:BC102257 IPI:IPI00694467
RefSeq:NP_776604.1 UniGene:Bt.65279 ProteinModelPortal:Q95123
SMR:Q95123 IntAct:Q95123 STRING:Q95123 Ensembl:ENSBTAT00000021636
GeneID:281481 KEGG:bta:281481 CTD:6392 eggNOG:NOG243590
InParanoid:Q95123 NextBio:20805456 Uniprot:Q95123
Length = 158
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 44/118 (37%), Positives = 63/118 (53%)
Query: 11 TTQVQHDAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
T + + HS S +L WT ER +S LL +IPAAYL P A++Y+L ++ +HSHW
Sbjct: 45 TQHIHLSPSHHSGSKAASLHWTGERVVSVLLLGLIPAAYLNPCSAMDYSLAATLTLHSHW 104
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
GI +V DY V G A+ K + +LS T AGL + G+ + LW +
Sbjct: 105 GIGQVVTDY----VHGDAVQKAAKTGLLVLSAFTFAGLCYFNYHDVGICKAVAMLWKL 158
>UNIPROTKB|A5GZW8 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9823 "Sus
scrofa" [GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=IDA] [GO:0020037 "heme binding" evidence=IDA] [GO:0048039
"ubiquinone binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223
GO:GO:0016021 GO:GO:0005506 GO:GO:0006099 GO:GO:0020037
GO:GO:0005749 GO:GO:0006121 PDB:1ZOY PDB:1ZP0 PDB:3ABV PDB:3AE1
PDB:3AE2 PDB:3AE3 PDB:3AE4 PDB:3AE5 PDB:3AE6 PDB:3AE7 PDB:3AE8
PDB:3AE9 PDB:3AEA PDB:3AEB PDB:3AEC PDB:3AED PDB:3AEE PDB:3AEF
PDB:3AEG PDB:3SFD PDB:3SFE PDBsum:1ZOY PDBsum:1ZP0 PDBsum:3ABV
PDBsum:3AE1 PDBsum:3AE2 PDBsum:3AE3 PDBsum:3AE4 PDBsum:3AE5
PDBsum:3AE6 PDBsum:3AE7 PDBsum:3AE8 PDBsum:3AE9 PDBsum:3AEA
PDBsum:3AEB PDBsum:3AEC PDBsum:3AED PDBsum:3AEE PDBsum:3AEF
PDBsum:3AEG PDBsum:3SFD PDBsum:3SFE GO:GO:0048039 eggNOG:NOG264646
HOGENOM:HOG000290645 HOVERGEN:HBG003003 KO:K00237 OrthoDB:EOG4STS5Z
PANTHER:PTHR13337 CTD:6392 EMBL:DQ486897 EMBL:AY682832
EMBL:AY682219 EMBL:AY682222 RefSeq:NP_001090985.1 UniGene:Ssc.95416
ProteinModelPortal:A5GZW8 SMR:A5GZW8 STRING:A5GZW8 GeneID:100048954
KEGG:ssc:100048954 EvolutionaryTrace:A5GZW8 Uniprot:A5GZW8
Length = 159
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 6 VKHFSTTQVQHDAAVHSKSDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVM 65
V+H + H A+ + S H WT ER +S LL ++PAAYL P A++Y+L ++ +
Sbjct: 46 VQHIHLSP-SHQASSKAASLH---WTGERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTL 101
Query: 66 HSHWGIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLW 125
H HWGI +V DY R G AL K+ + LS T AGL + G+ + LW
Sbjct: 102 HGHWGIGQVVTDYVR----GDALQKVAKAGLLALSAFTFAGLCYFNYHDVGICKAVAMLW 157
Query: 126 AI 127
+
Sbjct: 158 KL 159
>UNIPROTKB|Q5G2C6 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9940 "Ovis
aries" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0048039
"ubiquinone binding" evidence=ISS] InterPro:IPR007992 Pfam:PF05328
UniPathway:UPA00223 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039 HSSP:Q5ZIS0
HOVERGEN:HBG003003 PANTHER:PTHR13337 EMBL:AY861373 EMBL:AY861374
EMBL:AY861375 EMBL:AY861376 EMBL:AY861377 EMBL:AY861378
EMBL:AY861379 RefSeq:NP_001072121.1 RefSeq:NP_001087250.1
UniGene:Oar.12987 UniGene:Oar.1617 ProteinModelPortal:Q5G2C6
SMR:Q5G2C6 GeneID:780442 GeneID:780772 Uniprot:Q5G2C6
Length = 158
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 44/118 (37%), Positives = 63/118 (53%)
Query: 11 TTQVQHDAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
T + + HS S +L WT ER +S LL +IPAAYL P A++Y+L ++ +HSHW
Sbjct: 45 TQHIHLSPSHHSGSKAASLHWTGERVVSVLLLGLIPAAYLNPCSAMDYSLAATLTLHSHW 104
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
GI +V DY V G A+ K + +LS T AGL + G+ + LW +
Sbjct: 105 GIGQVVTDY----VHGDAVQKAAKTGLLVLSAFTFAGLCYFNYHDVGICKAVAMLWKL 158
>UNIPROTKB|F1SMA9 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005740 "mitochondrial envelope" evidence=IEA]
InterPro:IPR007992 Pfam:PF05328 GO:GO:0016021 GO:GO:0005506
GO:GO:0006099 GO:GO:0020037 GO:GO:0005740 GO:GO:0006121
GeneTree:ENSGT00390000010003 PANTHER:PTHR13337 OMA:LTLHSHW
EMBL:CU655934 Ensembl:ENSSSCT00000016399 ArrayExpress:F1SMA9
Uniprot:F1SMA9
Length = 159
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 44/122 (36%), Positives = 63/122 (51%)
Query: 6 VKHFSTTQVQHDAAVHSKSDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVM 65
V+H + H A+ + S H WT ER +S LL ++PAAYL P A++Y+L ++ +
Sbjct: 46 VQHIHLSP-SHQASSKAASLH---WTGERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTL 101
Query: 66 HSHWGIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLW 125
H HWGI +V DY R G AL K + LS T AGL + G+ + LW
Sbjct: 102 HGHWGIGQVVTDYVR----GDALQKAAKAGLLALSAFTFAGLCYFNYHDVGICKAVAMLW 157
Query: 126 AI 127
+
Sbjct: 158 KL 159
>UNIPROTKB|O14521 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=TAS] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA;IDA;TAS] [GO:0000104 "succinate dehydrogenase
activity" evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS;IDA;TAS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0020037 "heme binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=TAS] [GO:0005740
"mitochondrial envelope" evidence=TAS] [GO:0022904 "respiratory
electron transport chain" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223 GO:GO:0016021
EMBL:CH471065 GO:GO:0044281 GO:GO:0005506 GO:GO:0009055
GO:GO:0006099 GO:GO:0020037 DrugBank:DB00139 GO:GO:0022904
GO:GO:0005749 GO:GO:0000104 GO:GO:0006121 MIM:606864 Orphanet:97286
Orphanet:29072 GO:GO:0048039 MIM:171300 MIM:612359 Orphanet:201
eggNOG:NOG264646 HOGENOM:HOG000290645 HOVERGEN:HBG003003 KO:K00237
OrthoDB:EOG4STS5Z PANTHER:PTHR13337 OMA:LTLHSHW CTD:6392
EMBL:AB006202 EMBL:AB026906 EMBL:AK075360 EMBL:BT007238
EMBL:CR456932 EMBL:AP002007 EMBL:BC005263 EMBL:BC009574
EMBL:BC012603 EMBL:BC015188 EMBL:BC015992 EMBL:BC022350
EMBL:BC070307 EMBL:BC071755 EMBL:BC071756 IPI:IPI00297325
RefSeq:NP_002993.1 UniGene:Hs.356270 ProteinModelPortal:O14521
SMR:O14521 STRING:O14521 PaxDb:O14521 PRIDE:O14521 DNASU:6392
Ensembl:ENST00000375549 GeneID:6392 KEGG:hsa:6392 UCSC:uc001pmz.3
GeneCards:GC11P111991 H-InvDB:HIX0029526 HGNC:HGNC:10683
HPA:HPA045727 MIM:114900 MIM:168000 MIM:602690 neXtProt:NX_O14521
Orphanet:877 PharmGKB:PA35608 InParanoid:O14521
BioCyc:MetaCyc:ENSG00000150781-MONOMER ChiTaRS:SDHD GenomeRNAi:6392
NextBio:24838 ArrayExpress:O14521 Bgee:O14521 CleanEx:HS_SDHD
Genevestigator:O14521 GermOnline:ENSG00000204370 Uniprot:O14521
Length = 159
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 44/118 (37%), Positives = 63/118 (53%)
Query: 14 VQH---DAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
VQH + HS S +L WT ER +S LL ++PAAYL P A++Y+L ++ +H HW
Sbjct: 46 VQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHW 105
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
G+ +V DY V G AL K + LS +T AGL + G+ + LW +
Sbjct: 106 GLGQVVTDY----VHGDALQKAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWKL 159
>UNIPROTKB|P92507 [details] [associations]
symbol:P92507 "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:6253 "Ascaris
suum" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0048039
"ubiquinone binding" evidence=ISS] InterPro:IPR007992 Pfam:PF05328
UniPathway:UPA00223 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
PANTHER:PTHR13337 EMBL:D78158 PDB:3VR8 PDB:3VRB PDBsum:3VR8
PDBsum:3VRB ProteinModelPortal:P92507 SABIO-RK:P92507
Uniprot:P92507
Length = 156
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 26 HTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYARPEVVG 85
H TL+ IER+ +A ++ +IPAAY + ++ L +++ +H HWG+ +V DY RP V+G
Sbjct: 55 HGTLFKIERYFAAAMVPLIPAAYFIHGREMDLCLALALTLHVHWGVWGVVNDYGRPFVLG 114
Query: 86 VALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
LA + YI + LAGL+ + G+ + +W +
Sbjct: 115 DTLAAAVRVGAYIFTACLLAGLLYFNEHDVGLTRAFEMVWEL 156
>ZFIN|ZDB-GENE-040822-17 [details] [associations]
symbol:sdhdb "succinate dehydrogenase complex,
subunit D, integral membrane protein b" species:7955 "Danio rerio"
[GO:0005740 "mitochondrial envelope" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0020037 "heme binding"
evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA;ISS] [GO:0005749 "mitochondrial respiratory chain
complex II" evidence=ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR007992 Pfam:PF05328
UniPathway:UPA00223 ZFIN:ZDB-GENE-040822-17 GO:GO:0016021
GO:GO:0005506 GO:GO:0006099 GO:GO:0020037 GO:GO:0005749
GO:GO:0006121 GO:GO:0048039 HSSP:Q5ZIS0 eggNOG:NOG264646
GeneTree:ENSGT00390000010003 HOGENOM:HOG000290645
HOVERGEN:HBG003003 KO:K00237 OrthoDB:EOG4STS5Z PANTHER:PTHR13337
EMBL:BC079507 IPI:IPI00492124 RefSeq:NP_001004004.1
UniGene:Dr.77224 ProteinModelPortal:Q68FN7 SMR:Q68FN7 STRING:Q68FN7
Ensembl:ENSDART00000039865 GeneID:445500 KEGG:dre:445500 CTD:445500
InParanoid:Q68FN7 OMA:LTLHSHW NextBio:20832170 Bgee:Q68FN7
Uniprot:Q68FN7
Length = 158
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 27 TTLWTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYARPEVVGV 86
T WT ER LS LL++ P AY PS A++Y+L ++ +H HWG+ +V DY V G
Sbjct: 62 TMHWTGERILSIALLSLAPVAYFCPSPAVDYSLAAALTLHGHWGLGQVVTDY----VHGD 117
Query: 87 ALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWA 126
A K+ + +++LS +T AGL + G+ + LW+
Sbjct: 118 AKIKMANAGLFVLSTVTFAGLCYFNYHDVGICKAVALLWS 157
>UNIPROTKB|Q5RC29 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9601 "Pongo
abelii" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0048039
"ubiquinone binding" evidence=ISS] InterPro:IPR007992 Pfam:PF05328
UniPathway:UPA00223 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005749 GO:GO:0000104 GO:GO:0006121
GO:GO:0048039 GeneTree:ENSGT00390000010003 HOVERGEN:HBG003003
KO:K00237 OrthoDB:EOG4STS5Z PANTHER:PTHR13337 OMA:LTLHSHW CTD:6392
EMBL:CR858453 RefSeq:NP_001125372.1 UniGene:Pab.18216
ProteinModelPortal:Q5RC29 SMR:Q5RC29 Ensembl:ENSPPYT00000004615
GeneID:100172275 KEGG:pon:100172275 InParanoid:Q5RC29
Uniprot:Q5RC29
Length = 159
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 21 HSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYA 79
HS S +L WT ER +S LL ++PAAYL P A++Y+L ++ +H HWG+ +V DY
Sbjct: 56 HSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAATLTLHGHWGLGQVVTDY- 114
Query: 80 RPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
V G A K + LS +T AGL + G+ + LW +
Sbjct: 115 ---VHGDASQKAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWKL 159
>MGI|MGI:1914175 [details] [associations]
symbol:Sdhd "succinate dehydrogenase complex, subunit D,
integral membrane protein" species:10090 "Mus musculus" [GO:0000104
"succinate dehydrogenase activity" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005740 "mitochondrial envelope"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006099 "tricarboxylic acid cycle" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR007992 Pfam:PF05328
UniPathway:UPA00223 MGI:MGI:1914175 GO:GO:0016021 GO:GO:0005506
GO:GO:0006099 GO:GO:0020037 GO:GO:0005749 GO:GO:0006121
GO:GO:0048039 eggNOG:NOG264646 GeneTree:ENSGT00390000010003
HOGENOM:HOG000290645 HOVERGEN:HBG003003 KO:K00237 OrthoDB:EOG4STS5Z
PANTHER:PTHR13337 OMA:LTLHSHW CTD:6392 ChiTaRS:SDHD EMBL:AK013962
EMBL:AK135970 EMBL:BC145731 EMBL:BC145733 IPI:IPI00187452
RefSeq:NP_080124.1 UniGene:Mm.10406 ProteinModelPortal:Q9CXV1
SMR:Q9CXV1 STRING:Q9CXV1 PaxDb:Q9CXV1 PRIDE:Q9CXV1
Ensembl:ENSMUST00000000175 GeneID:66925 KEGG:mmu:66925
UCSC:uc009pjv.2 InParanoid:A6H629 NextBio:323033 Bgee:Q9CXV1
Genevestigator:Q9CXV1 GermOnline:ENSMUSG00000000171 Uniprot:Q9CXV1
Length = 159
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 41/118 (34%), Positives = 59/118 (50%)
Query: 11 TTQVQHDAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
T + + HS S +L WT ER +S LL +IPA YL P ++Y+L ++ +HSHW
Sbjct: 46 TQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLIPAGYLNPCSVVDYSLAAALTLHSHW 105
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
G+ +V DY V G L K + LS +T AGL + G+ LW +
Sbjct: 106 GLGQVVTDY----VHGDTLPKAARAGLLALSALTFAGLCYFNYHDVGICRAVAMLWKL 159
>UNIPROTKB|E9PIC0 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9606 "Homo
sapiens" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005740 GO:GO:0006121 PANTHER:PTHR13337
EMBL:AP002007 HGNC:HGNC:10683 ChiTaRS:SDHD IPI:IPI00985489
ProteinModelPortal:E9PIC0 SMR:E9PIC0 Ensembl:ENST00000525291
ArrayExpress:E9PIC0 Bgee:E9PIC0 Uniprot:E9PIC0
Length = 120
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 37/98 (37%), Positives = 54/98 (55%)
Query: 30 WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYARPEVVGVALA 89
WT ER +S LL ++PAAYL P A++Y+L ++ +H HWG+ +V DY V G AL
Sbjct: 27 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY----VHGDALQ 82
Query: 90 KIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
K + LS +T AGL + G+ + LW +
Sbjct: 83 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWKL 120
>RGD|735231 [details] [associations]
symbol:Sdhd "succinate dehydrogenase complex, subunit D, integral
membrane protein" species:10116 "Rattus norvegicus" [GO:0000104
"succinate dehydrogenase activity" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005740
"mitochondrial envelope" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=ISO;ISS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0020037 "heme binding" evidence=ISS]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048039 "ubiquinone binding"
evidence=ISS] InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223
RGD:735231 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099 GO:GO:0020037
GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
GeneTree:ENSGT00390000010003 HOGENOM:HOG000290645
HOVERGEN:HBG003003 KO:K00237 PANTHER:PTHR13337 CTD:6392
eggNOG:NOG243590 EMBL:BC059160 IPI:IPI00778578 RefSeq:NP_942083.1
UniGene:Rn.3040 ProteinModelPortal:Q6PCT8 SMR:Q6PCT8 STRING:Q6PCT8
Ensembl:ENSRNOT00000059169 GeneID:363061 KEGG:rno:363061
UCSC:RGD:735231 InParanoid:Q6PCT8 SABIO-RK:Q6PCT8 NextBio:682290
ArrayExpress:Q6PCT8 Genevestigator:Q6PCT8
GermOnline:ENSRNOG00000022980 Uniprot:Q6PCT8
Length = 159
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 44/118 (37%), Positives = 61/118 (51%)
Query: 12 TQVQHDAAVH-SKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
TQ H + H S S +L WT ER +S LL +IPA YL P ++Y+L ++ +HSHW
Sbjct: 46 TQHIHLSPSHQSGSKAASLHWTSERVVSVLLLGLIPAGYLNPCSVVDYSLAAALTLHSHW 105
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLWAI 127
GI +V DY V G AL K + +S +T AGL + G+ LW +
Sbjct: 106 GIGQVVTDY----VHGDALQKATKAGLLAVSALTFAGLCYFNYHDVGICRAVAMLWKL 159
>ZFIN|ZDB-GENE-040718-192 [details] [associations]
symbol:sdhda "succinate dehydrogenase complex,
subunit D, integral membrane protein a" species:7955 "Danio rerio"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005740
"mitochondrial envelope" evidence=IEA] [GO:0048039 "ubiquinone
binding" evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA;ISS] [GO:0005749 "mitochondrial respiratory chain
complex II" evidence=ISS] [GO:0020037 "heme binding" evidence=ISS]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR007992 Pfam:PF05328
ZFIN:ZDB-GENE-040718-192 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
EMBL:BC076319 IPI:IPI00772919 RefSeq:NP_001002489.1
UniGene:Dr.90484 HSSP:Q5ZIS0 ProteinModelPortal:Q6DGM2 SMR:Q6DGM2
STRING:Q6DGM2 Ensembl:ENSDART00000078115 GeneID:436762
KEGG:dre:436762 CTD:436762 eggNOG:NOG264646
GeneTree:ENSGT00390000010003 HOGENOM:HOG000290645
HOVERGEN:HBG003003 InParanoid:Q6DGM2 KO:K00237 OMA:KLERLWA
OrthoDB:EOG4STS5Z NextBio:20831198 Bgee:Q6DGM2 PANTHER:PTHR13337
Uniprot:Q6DGM2
Length = 154
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 22 SKSDHTTLWTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIEALVVDYARP 81
S S H WT ER ++ LL + PAAYL P ++Y++ ++ MH HWGI ++ DY
Sbjct: 56 SASQH---WTGERVMTLVLLGMAPAAYLCPGPVVDYSIAAALTMHGHWGIGQVLTDYVHG 112
Query: 82 EVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLW 125
EV + LAK+ +++LS T GL N G+ + LW
Sbjct: 113 EVK-IKLAKV---GIFLLSTATFFGLCYFNYNDVGLCKAVVMLW 152
>POMBASE|SPBP23A10.16 [details] [associations]
symbol:sdh4 "TIM22 inner membrane protein import
complex anchor subunit Tim18" species:4896 "Schizosaccharomyces
pombe" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0020037 "heme binding" evidence=ISM;ISS] [GO:0042721
"mitochondrial inner membrane protein insertion complex"
evidence=ISS] [GO:0043495 "protein anchor" evidence=NAS]
[GO:0045039 "protein import into mitochondrial inner membrane"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048039 "ubiquinone binding" evidence=ISS] InterPro:IPR007992
Pfam:PF05328 UniPathway:UPA00223 PomBase:SPBP23A10.16 GO:GO:0016021
GO:GO:0005506 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006099
GO:GO:0020037 GO:GO:0043495 GO:GO:0005749 GO:GO:0006121
GO:GO:0048039 eggNOG:NOG264646 PANTHER:PTHR13337
HOGENOM:HOG000204209 OrthoDB:EOG4W9NDM PIR:T50403
RefSeq:NP_595828.2 STRING:Q9P7X0 EnsemblFungi:SPBP23A10.16.1
GeneID:2541292 NextBio:20802402 GO:GO:0042721 GO:GO:0045039
Uniprot:Q9P7X0
Length = 159
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 16 HDAAV---HSKSDHTTLWTIERFLSAGLL--AVIPAAYLVPSVALEYALVVSIVMHSHWG 70
+DAAV HSK + W ER ++ ++ +IP ++ AL +++ H+H G
Sbjct: 44 NDAAVFPHHSKLHGSYHWDFERIIAIAMVPQVMIPLFTGTSHPLMDAALACTLITHAHLG 103
Query: 71 IEALVVDYARPEVVGVALAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLW 125
E+ V+DY P L+ + H + +++TL G+ N G+ EG KKLW
Sbjct: 104 FESCVIDYF-PARRFKKLSPLMHWILRGCTVLTLIGVYEFNTNDIGLTEGIKKLW 157
>UNIPROTKB|E9PIG3 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9606 "Homo
sapiens" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005740 GO:GO:0006121 PANTHER:PTHR13337
EMBL:AP002007 HGNC:HGNC:10683 ChiTaRS:SDHD IPI:IPI00978980
ProteinModelPortal:E9PIG3 SMR:E9PIG3 Ensembl:ENST00000526592
ArrayExpress:E9PIG3 Bgee:E9PIG3 Uniprot:E9PIG3
Length = 143
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 14 VQH---DAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHW 69
VQH + HS S +L WT ER +S LL ++PAAYL P A++Y+L ++ +H HW
Sbjct: 46 VQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHW 105
Query: 70 GIEALVVDYARPEVVGVALAKIFHLSVYILSIITL 104
+E AR ++ G A +++ S + + I L
Sbjct: 106 -LECNGAILARHDL-GSARSQLTATSAFRVQAILL 138
>UNIPROTKB|H0YD96 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9606 "Homo
sapiens" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005740 GO:GO:0006121 PANTHER:PTHR13337
EMBL:AP002007 HGNC:HGNC:10683 ChiTaRS:SDHD Ensembl:ENST00000534010
Uniprot:H0YD96
Length = 55
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 30 WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSHWGIE 72
WT ER +S LL ++PAAYL P A++Y+L ++ +H HW I+
Sbjct: 10 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWKIK 52
>UNIPROTKB|G3V173 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9606 "Homo
sapiens" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 EMBL:CH471065 GO:GO:0005506
GO:GO:0006099 GO:GO:0020037 GO:GO:0005740 GO:GO:0006121
PANTHER:PTHR13337 EMBL:AP002007 UniGene:Hs.356270 HGNC:HGNC:10683
ChiTaRS:SDHD ProteinModelPortal:G3V173 SMR:G3V173
Ensembl:ENST00000528021 ArrayExpress:G3V173 Bgee:G3V173
Uniprot:G3V173
Length = 104
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 14 VQH---DAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSH 68
VQH + HS S +L WT ER +S LL ++PAAYL P A++Y+L ++ +H H
Sbjct: 46 VQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGH 104
>UNIPROTKB|H0YD41 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9606 "Homo
sapiens" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005740 GO:GO:0006121 PANTHER:PTHR13337
EMBL:AP002007 HGNC:HGNC:10683 ChiTaRS:SDHD Ensembl:ENST00000530923
Uniprot:H0YD41
Length = 101
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 14 VQH---DAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSH 68
VQH + HS S +L WT ER +S LL ++PAAYL P A++Y+L ++ +H H
Sbjct: 43 VQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGH 101
>UNIPROTKB|H3BRW5 [details] [associations]
symbol:H3BRW5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005740 EMBL:AP002884 GO:GO:0006121
PANTHER:PTHR13337 EMBL:AP002007 SMR:H3BRW5 Ensembl:ENST00000531744
Ensembl:ENST00000532699 Uniprot:H3BRW5
Length = 140
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 14 VQH---DAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMHSH 68
VQH + HS S +L WT ER +S LL ++PAAYL P A++Y+L ++ +H H
Sbjct: 46 VQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGH 104
>SGD|S000004154 [details] [associations]
symbol:SHH4 "Mitochondrial inner membrane protein of unknown
function" species:4932 "Saccharomyces cerevisiae" [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005740 "mitochondrial
envelope" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA;IDA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223
SGD:S000004154 GO:GO:0016021 GO:GO:0005743 GO:GO:0005506
GO:GO:0006099 EMBL:BK006945 GO:GO:0020037 EMBL:U51921 GO:GO:0006121
KO:K00237 PANTHER:PTHR13337 eggNOG:NOG305898 HOGENOM:HOG000204209
OrthoDB:EOG4W9NDM GeneTree:ENSGT00390000009201 PIR:S68480
RefSeq:NP_013265.1 ProteinModelPortal:Q06236 SMR:Q06236
DIP:DIP-5582N MINT:MINT-512248 STRING:Q06236 EnsemblFungi:YLR164W
GeneID:850861 KEGG:sce:YLR164W CYGD:YLR164w NextBio:967182
Genevestigator:Q06236 GermOnline:YLR164W Uniprot:Q06236
Length = 168
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 22 SKSDHTTLWTIERFLSAGLLAVI--PAAYLVP-SVALEYALVVSIVMHSHWGIEALVVDY 78
S++ + W +ER LS +L +I P P S + L + ++ H H G ++ ++DY
Sbjct: 53 SRAQGSYHWIVERGLSLAVLPLIAVPLVTTGPISTFTDTFLSLVLLGHCHIGFQSCIIDY 112
Query: 79 ARPEVVGVALAKIFHLSVYILSI---ITLAGLMNLILNGGGVVEGTKKLW 125
V G K+ H ++Y+LS+ ++ G+ L G++ K LW
Sbjct: 113 ISERVYG----KVHHYAMYLLSLGSFLSFVGIYKLESQEAGLIASLKSLW 158
>UNIPROTKB|Q7SGY6 [details] [associations]
symbol:B18P24.060 "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:367110
"Neurospora crassa OR74A" [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005749 "mitochondrial respiratory
chain complex II" evidence=ISS] [GO:0020037 "heme binding"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
InterPro:IPR007992 Pfam:PF05328 UniPathway:UPA00223 GO:GO:0016021
GO:GO:0005506 GO:GO:0006099 GO:GO:0020037 GO:GO:0005749
GO:GO:0006121 GO:GO:0048039 eggNOG:NOG264646 KO:K00237
PANTHER:PTHR13337 HOGENOM:HOG000204209 OrthoDB:EOG4W9NDM
EMBL:BX842626 EMBL:AABX02000007 RefSeq:XP_965417.1
UniGene:Ncr.14404 ProteinModelPortal:Q7SGY6 STRING:Q7SGY6
EnsemblFungi:EFNCRT00000002361 GeneID:3881567 KEGG:ncr:NCU03031
Uniprot:Q7SGY6
Length = 166
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 30 WTIERFLSAGLLAVIPAAYLVPSV--ALEYALVVSIVMHSHWGIEALVVDYARPEVVGVA 87
WT +R ++AGL+ + A + S+ ++ L +I++HSH G ++VDY + V A
Sbjct: 68 WTFDRVVAAGLIPLTVAPFAAGSLNPTMDAVLAATILIHSHTGFGNIIVDYVPSKRVPKA 127
Query: 88 LAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLW 125
K+F + +++ L G+ E K++W
Sbjct: 128 -RKVFTWGLNAATVLVGLALYEFETTDVGLTETIKRVW 164
>ASPGD|ASPL0000061387 [details] [associations]
symbol:AN0896 species:162425 "Emericella nidulans"
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=IEA] [GO:0005740 "mitochondrial envelope"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR007992 Pfam:PF05328 GO:GO:0016021 EMBL:BN001308
GO:GO:0005506 GO:GO:0006099 GO:GO:0020037 GO:GO:0005740
GO:GO:0006121 PANTHER:PTHR13337 OMA:VNDAYVP
EnsemblFungi:CADANIAT00001761 Uniprot:C8VUS7
Length = 167
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 28/98 (28%), Positives = 51/98 (52%)
Query: 30 WTIERFLSAGLLAVIPAAYLVPSV-ALEYALVVSI-VMHSHWGIEALVVDYARPEVVGVA 87
WT ER ++ GL+ + A + S+ + A++ S+ V+HSH G +A ++DY V
Sbjct: 69 WTFERLVAVGLIPLTIAPFAAGSLNPVTDAVLCSLLVLHSHVGFQASIIDYFPTRRVPKT 128
Query: 88 LAKIFHLSVYILSIITLAGLMNLILNGGGVVEGTKKLW 125
+ + + + ++ T GL L N G+ E K++W
Sbjct: 129 -STLLNWLLRGFTLTTAVGLYELETNDVGLTETIKRVW 165
>UNIPROTKB|E9PK73 [details] [associations]
symbol:SDHD "Succinate dehydrogenase [ubiquinone]
cytochrome b small subunit, mitochondrial" species:9606 "Homo
sapiens" [GO:0005740 "mitochondrial envelope" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007992
Pfam:PF05328 GO:GO:0016021 GO:GO:0005506 GO:GO:0006099
GO:GO:0020037 GO:GO:0005740 GO:GO:0006121 PANTHER:PTHR13337
EMBL:AP002007 HGNC:HGNC:10683 ChiTaRS:SDHD IPI:IPI00976555
ProteinModelPortal:E9PK73 SMR:E9PK73 Ensembl:ENST00000528182
ArrayExpress:E9PK73 Bgee:E9PK73 Uniprot:E9PK73
Length = 131
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 14 VQH---DAAVHSKSDHTTL-WTIERFLSAGLLAVIPAAYLVPSVALEYALVVSIVMH 66
VQH + HS S +L WT ER +S LL ++PAAYL P A++Y+L ++ +H
Sbjct: 46 VQHIHLSPSHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLH 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 130 130 0.00091 102 3 11 22 0.50 30
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 569 (61 KB)
Total size of DFA: 124 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:05
No. of threads or processors used: 24
Search cpu time: 13.21u 0.06s 13.27t Elapsed: 00:00:16
Total cpu time: 13.21u 0.06s 13.27t Elapsed: 00:00:28
Start: Thu Aug 15 12:43:18 2013 End: Thu Aug 15 12:43:46 2013