BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10709
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DEI8|MIA40_DANRE Mitochondrial intermembrane space import and assembly protein 40
OS=Danio rerio GN=chchd4 PE=2 SV=1
Length = 146
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQP-----GLILPDGSINWNCPCLGGMA 259
MS C++EGKD IIF TKEDH PS+ EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCKQEGKDCIIFVTKEDHEAPSNAELVEDDPNDPYEDHGLILPNGDINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQNDDDD 311
+GPCG QF++AFSCFHYS +E KG +C E F+ MQ+CM +YP LY Q DD+D
Sbjct: 61 SGPCGQQFKDAFSCFHYSKEEIKGSDCVENFRGMQECMQKYPELYPQEDDND 112
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 5/84 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQP-----GLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PS+ EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCKQEGKDCIIFVTKEDHEAPSNAELVEDDPNDPYEDHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKG 79
+GPCG QF++AFSCFHYS +E KG
Sbjct: 61 SGPCGQQFKDAFSCFHYSKEEIKG 84
>sp|Q8N4Q1|MIA40_HUMAN Mitochondrial intermembrane space import and assembly protein 40
OS=Homo sapiens GN=CHCHD4 PE=1 SV=1
Length = 142
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 82/107 (76%), Gaps = 5/107 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 259
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G+INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGNINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 306
+GPCG QF+ AFSCFHYST+E KG +C + F+ MQ+CM +YP LY Q
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEEIKGSDCVDQFRAMQECMQKYPDLYPQ 107
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 70/98 (71%), Gaps = 5/98 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G+INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGNINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGDLRSTKSRATTILM 93
+GPCG QF+ AFSCFHYST+E KG + RA M
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEEIKGSDCVDQFRAMQECM 98
>sp|Q63ZK1|MI40B_XENLA Mitochondrial intermembrane space import and assembly protein 40-B
OS=Xenopus laevis GN=chchd4-b PE=2 SV=1
Length = 139
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 80/107 (74%), Gaps = 5/107 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 259
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPFEEQGLILPNGDINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 306
+GPCG QF+ AFSCFHYS +E KG +C + F+ MQ+CM +YP LY Q
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKGSDCLDQFRAMQECMQKYPELYPQ 107
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 5/84 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPFEEQGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKG 79
+GPCG QF+ AFSCFHYS +E KG
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKG 84
>sp|Q8VEA4|MIA40_MOUSE Mitochondrial intermembrane space import and assembly protein 40
OS=Mus musculus GN=Chchd4 PE=1 SV=1
Length = 139
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 82/108 (75%), Gaps = 5/108 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 259
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQN 307
+GPCG QF+ AFSCFHYST++ KG +C + F+ MQ+CM +YP LY Q+
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEDIKGSDCIDQFRAMQECMQKYPDLYPQD 108
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 5/84 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKG 79
+GPCG QF+ AFSCFHYST++ KG
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEDIKG 84
>sp|Q5BJN5|MIA40_RAT Mitochondrial intermembrane space import and assembly protein 40
OS=Rattus norvegicus GN=Chchd4 PE=2 SV=1
Length = 139
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 82/108 (75%), Gaps = 5/108 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 259
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQN 307
+GPCG QF+ AFSCFHYST++ KG +C + F+ MQ+CM +YP LY Q+
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEDIKGSDCIDQFRAMQECMQKYPDLYPQD 108
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 5/84 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKG 79
+GPCG QF+ AFSCFHYST++ KG
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEDIKG 84
>sp|Q6PBC3|MIA40_XENTR Mitochondrial intermembrane space import and assembly protein 40
OS=Xenopus tropicalis GN=chchd4 PE=2 SV=1
Length = 139
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 5/107 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQP-----GLILPDGSINWNCPCLGGMA 259
MS C++EGKD IIF TKEDH PSS EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPYEDHGLILPNGDINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 306
+GPCG QF+ AFSCFHYS +E KG +C + F+ MQ+CM +YP +Y Q
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKGSDCLDQFRAMQECMQKYPDIYPQ 107
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQP-----GLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPYEDHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKG 79
+GPCG QF+ AFSCFHYS +E KG
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKG 84
>sp|Q6NU12|MI40A_XENLA Mitochondrial intermembrane space import and assembly protein 40-A
OS=Xenopus laevis GN=chchd4-a PE=2 SV=1
Length = 139
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 78/105 (74%), Gaps = 5/105 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQ-----PGLILPDGSINWNCPCLGGMA 259
MS C++EGKD IIF TKEDH PSS EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPYEDQGLILPNGDINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLY 304
+GPCG QF+ AFSCFHYS +E KG +C + F+ MQ+CM +YP LY
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKGSDCLDQFRGMQECMQKYPDLY 105
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQ-----PGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPYEDQGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKG 79
+GPCG QF+ AFSCFHYS +E KG
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKG 84
>sp|Q2KHZ4|MIA40_BOVIN Mitochondrial intermembrane space import and assembly protein 40
OS=Bos taurus GN=CHCHD4 PE=2 SV=1
Length = 137
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 80/107 (74%), Gaps = 5/107 (4%)
Query: 205 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 259
M+ C++EGKD IIF TKEDH PS+ EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MAYCRQEGKDRIIFVTKEDHETPSNAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 260 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 306
+GPCG QF+ AFSCFHYS ++ KG +C + F+ MQ+CM +YP LY Q
Sbjct: 61 SGPCGEQFKAAFSCFHYSKEDVKGSDCVDQFRAMQECMQKYPDLYPQ 107
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
M+ C++EGKD IIF TKEDH PS+ EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MAYCRQEGKDRIIFVTKEDHETPSNAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGDLRSTKSRATTILM 93
+GPCG QF+ AFSCFHYS ++ KG + RA M
Sbjct: 61 SGPCGEQFKAAFSCFHYSKEDVKGSDCVDQFRAMQECM 98
>sp|P0CM68|MIA40_CRYNJ Mitochondrial intermembrane space import and assembly protein 40
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=MIA40 PE=3 SV=1
Length = 242
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 214 DFIIFATKEDHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFS 272
D + A + I E EP G P+ G INW+CPCLGGMATGPCG QF+ AFS
Sbjct: 105 DSVEKAADDAAQILEEKEAEASEPSQGAYNPETGEINWDCPCLGGMATGPCGEQFKAAFS 164
Query: 273 CFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQND 308
CF YS EPKGV+C E FK MQDC ++P +Y + D
Sbjct: 165 CFVYSEAEPKGVDCVELFKVMQDCFREHPEIYGEVD 200
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 10 DFIIFATKEDHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFS 68
D + A + I E EP G P+ G INW+CPCLGGMATGPCG QF+ AFS
Sbjct: 105 DSVEKAADDAAQILEEKEAEASEPSQGAYNPETGEINWDCPCLGGMATGPCGEQFKAAFS 164
Query: 69 CFHYSTDEPKG 79
CF YS EPKG
Sbjct: 165 CFVYSEAEPKG 175
>sp|P0CM69|MIA40_CRYNB Mitochondrial intermembrane space import and assembly protein 40
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=MIA40 PE=3 SV=1
Length = 242
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 214 DFIIFATKEDHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFS 272
D + A + I E EP G P+ G INW+CPCLGGMATGPCG QF+ AFS
Sbjct: 105 DSVEKAADDAAQILEEKEAEASEPSQGAYNPETGEINWDCPCLGGMATGPCGEQFKAAFS 164
Query: 273 CFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQND 308
CF YS EPKGV+C E FK MQDC ++P +Y + D
Sbjct: 165 CFVYSEAEPKGVDCVELFKVMQDCFREHPEIYGEVD 200
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 10 DFIIFATKEDHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFS 68
D + A + I E EP G P+ G INW+CPCLGGMATGPCG QF+ AFS
Sbjct: 105 DSVEKAADDAAQILEEKEAEASEPSQGAYNPETGEINWDCPCLGGMATGPCGEQFKAAFS 164
Query: 69 CFHYSTDEPKG 79
CF YS EPKG
Sbjct: 165 CFVYSEAEPKG 175
>sp|P36046|MIA40_YEAST Mitochondrial intermembrane space import and assembly protein 40
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MIA40 PE=1 SV=2
Length = 403
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 9/109 (8%)
Query: 240 GLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMA 298
G PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG++C E F+ MQDC
Sbjct: 283 GAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFR 342
Query: 299 QYPTLYKQN---DDDDEDLDDDVKDVSIR-----KEAQEKADRIIEQAD 339
+YP Y + DDE+ D VK +I A+E A + EQ+D
Sbjct: 343 KYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSD 391
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 36 GLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
G PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG
Sbjct: 283 GAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKG 327
>sp|Q4P8D2|MIA40_USTMA Mitochondrial intermembrane space import and assembly protein 40
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=MIA40
PE=3 SV=1
Length = 247
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 51/67 (76%)
Query: 246 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 305
G INW+CPCLGGMA GPCG QF+ AFSCF YS EPKG++C + FK MQDC ++P +YK
Sbjct: 143 GEINWDCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKGIDCVDKFKAMQDCFREHPDVYK 202
Query: 306 QNDDDDE 312
+DDE
Sbjct: 203 DEIEDDE 209
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
G INW+CPCLGGMA GPCG QF+ AFSCF YS EPKG
Sbjct: 143 GEINWDCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKG 180
>sp|Q6CSA1|MIA40_KLULA Mitochondrial intermembrane space import and assembly protein 40
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=MIA40
PE=3 SV=1
Length = 406
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%)
Query: 246 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 305
G INW+CPCLGGMA GPCG +F+ AFSCF YS +PKG+NC E F TMQ+C +YP Y
Sbjct: 276 GEINWDCPCLGGMAYGPCGEEFKSAFSCFVYSEADPKGINCVEKFSTMQNCFRKYPDYYA 335
Query: 306 QNDDDDEDLDDDVKDV 321
+ D+E+ + +
Sbjct: 336 EQIKDEEEASAEASKI 351
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
G INW+CPCLGGMA GPCG +F+ AFSCF YS +PKG
Sbjct: 276 GEINWDCPCLGGMAYGPCGEEFKSAFSCFVYSEADPKG 313
>sp|P0C1D2|MIA40_EMENI Mitochondrial intermembrane space import and assembly protein 40
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=mia40 PE=3 SV=1
Length = 283
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 226 IPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGV 284
+ S+ EL Q P+ G INW+CPCLGGMA GPCG +FR AFSCF YS +EPKG+
Sbjct: 125 LKSAEELEAEADQQAAFNPETGEINWDCPCLGGMAYGPCGEEFRAAFSCFVYSEEEPKGM 184
Query: 285 NCFEAFKTMQDCMAQYPTLYKQNDDDD 311
+C + FK MQDC +P +Y DDD
Sbjct: 185 DCIDKFKAMQDCFRAHPDVYGAELDDD 211
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 22 IPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
+ S+ EL Q P+ G INW+CPCLGGMA GPCG +FR AFSCF YS +EPKG
Sbjct: 125 LKSAEELEAEADQQAAFNPETGEINWDCPCLGGMAYGPCGEEFRAAFSCFVYSEEEPKG 183
>sp|Q4IK03|MIA40_GIBZE Mitochondrial intermembrane space import and assembly protein 40
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=MIA40 PE=3 SV=2
Length = 368
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 238 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDC 296
Q G P+ G INW+CPCLGGMA GPCG +F+ AFSCF +S +EPKG++C + F+ MQ+C
Sbjct: 137 QQGAFNPETGEINWDCPCLGGMADGPCGEEFKTAFSCFVFSQEEPKGMDCIDKFQGMQEC 196
Query: 297 MAQYPTLYKQNDDDDED 313
+YP +Y DDED
Sbjct: 197 FKKYPDIYGAELADDED 213
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 34 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
Q G P+ G INW+CPCLGGMA GPCG +F+ AFSCF +S +EPKG
Sbjct: 137 QQGAFNPETGEINWDCPCLGGMADGPCGEEFKTAFSCFVFSQEEPKG 183
>sp|Q7S3S2|MIA40_NEUCR Mitochondrial intermembrane space import and assembly protein 40
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=mia-40 PE=3 SV=1
Length = 298
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%)
Query: 246 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 305
G INW+CPCLGGMA GPCG +F+ AFSCF YST+EPKG++C E F MQDC +YP +Y
Sbjct: 185 GEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKGMDCIEKFSHMQDCFRKYPEVYG 244
Query: 306 QNDDDD 311
DD
Sbjct: 245 AELADD 250
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
G INW+CPCLGGMA GPCG +F+ AFSCF YST+EPKG
Sbjct: 185 GEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKG 222
>sp|Q6FW26|MIA40_CANGA Mitochondrial intermembrane space import and assembly protein 40
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=MIA40 PE=3 SV=1
Length = 404
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Query: 238 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDC 296
Q PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG++C E F+ MQDC
Sbjct: 276 QESAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEAEPKGIDCVEKFQHMQDC 335
Query: 297 MAQYPTLYKQ---NDDDDEDLD 315
+YP Y + + DDE++D
Sbjct: 336 FRRYPEHYAEQLADPADDENVD 357
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 34 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
Q PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG
Sbjct: 276 QESAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEAEPKG 322
>sp|Q757A5|MIA40_ASHGO Mitochondrial intermembrane space import and assembly protein 40
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=MIA40 PE=3 SV=1
Length = 266
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 238 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDC 296
Q G PD G INW+CPCLGGMA GPCG +F+ AF+CF YS EPKG++C E F+ MQDC
Sbjct: 172 QQGAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFACFVYSEAEPKGIDCVEKFQVMQDC 231
Query: 297 MAQYPTLYKQNDDDDED 313
Q+P Y + + +E
Sbjct: 232 FRQHPEHYAEQLESEEQ 248
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 34 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
Q G PD G INW+CPCLGGMA GPCG +F+ AF+CF YS EPKG
Sbjct: 172 QQGAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFACFVYSEAEPKG 218
>sp|Q4WGL2|MIA40_ASPFU Mitochondrial intermembrane space import and assembly protein 40
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=mia40 PE=3 SV=1
Length = 297
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 223 DHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEP 281
+ A+ S EL Q P+ G INW+CPCLGGMA GPCG +F+ AFSCF YST+EP
Sbjct: 122 EAALKSPQELEDEAGQEAAFNPETGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEP 181
Query: 282 KGVNCFEAFKTMQDCMAQYPTLY 304
KG++C + FK MQ+C +YP +Y
Sbjct: 182 KGMDCIDKFKGMQECFRRYPDVY 204
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 19 DHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEP 77
+ A+ S EL Q P+ G INW+CPCLGGMA GPCG +F+ AFSCF YST+EP
Sbjct: 122 EAALKSPQELEDEAGQEAAFNPETGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEP 181
Query: 78 KG 79
KG
Sbjct: 182 KG 183
>sp|O94030|MIA40_CANAL Mitochondrial intermembrane space import and assembly protein 40
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=MIA40 PE=3 SV=2
Length = 252
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 220 TKEDHAIPSSVELPPPEP-----QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSC 273
+K + A S P EP Q PD G INW+CPCLGGMA GPCG +F+EAFSC
Sbjct: 114 SKANVADKKSNSQPEGEPEGEGKQEAAFNPDTGEINWDCPCLGGMAHGPCGEEFKEAFSC 173
Query: 274 FHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQN--DDDDEDLDDDVKDVSIRKEAQEKA 331
F +S EPKG++C + F+ M+ C +YP YK DD +E+ +V + E +
Sbjct: 174 FVFSETEPKGIDCIKKFENMRSCFKRYPEHYKDELYDDGEEEASTEV----VEHVVLETS 229
Query: 332 DRIIEQADSG 341
+ IEQ + G
Sbjct: 230 EPAIEQIEQG 239
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 16 TKEDHAIPSSVELPPPEP-----QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSC 69
+K + A S P EP Q PD G INW+CPCLGGMA GPCG +F+EAFSC
Sbjct: 114 SKANVADKKSNSQPEGEPEGEGKQEAAFNPDTGEINWDCPCLGGMAHGPCGEEFKEAFSC 173
Query: 70 FHYSTDEPKG 79
F +S EPKG
Sbjct: 174 FVFSETEPKG 183
>sp|Q6BSK8|MIA40_DEBHA Mitochondrial intermembrane space import and assembly protein 40
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=MIA40 PE=3 SV=1
Length = 249
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 246 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 305
G INW+CPCLGGMA GPCG +F+EAF+CF YS EPKG+ C + F++M++C ++P YK
Sbjct: 140 GEINWDCPCLGGMAHGPCGEEFKEAFACFIYSESEPKGIECIKKFESMRNCFREHPEHYK 199
Query: 306 QNDDDDEDLDDDVKDVSIRK 325
+ DDE+ + V DV+ +K
Sbjct: 200 EELYDDEEQEPLV-DVNEKK 218
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
G INW+CPCLGGMA GPCG +F+EAF+CF YS EPKG
Sbjct: 140 GEINWDCPCLGGMAHGPCGEEFKEAFACFIYSESEPKG 177
>sp|P87059|MIA40_SCHPO Mitochondrial intermembrane space import and assembly protein 40
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mia40 PE=3 SV=1
Length = 313
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 244 PD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPT 302
PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG+ C + F+ MQ C ++P
Sbjct: 190 PDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSKSEPKGMECLDKFQAMQACFQKHPE 249
Query: 303 LYKQNDDDDEDLDDDVKD 320
+Y+ + E+ D + +
Sbjct: 250 IYQDMVGESEEEDAETNE 267
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 40 PD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKG 79
PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG
Sbjct: 190 PDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSKSEPKG 230
>sp|Q2USJ2|MIA40_ASPOR Mitochondrial intermembrane space import and assembly protein 40
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=mia40 PE=3 SV=1
Length = 187
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 223 DHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEP 281
+ A+ S EL Q P+ G INW+CPCLGGMA GPCG +F+ AFSCF YS +EP
Sbjct: 116 EGAVKSPQELEEEAGQEAAFNPETGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEEEP 175
Query: 282 KGVNCFEAFK 291
KG++C E FK
Sbjct: 176 KGMDCIEKFK 185
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 19 DHAIPSSVELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEP 77
+ A+ S EL Q P+ G INW+CPCLGGMA GPCG +F+ AFSCF YS +EP
Sbjct: 116 EGAVKSPQELEEEAGQEAAFNPETGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEEEP 175
Query: 78 KG 79
KG
Sbjct: 176 KG 177
>sp|P34415|YLZ2_CAEEL Uncharacterized protein F42H10.2 OS=Caenorhabditis elegans
GN=F42H10.2 PE=4 SV=1
Length = 115
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 235 PEPQPGLILPDGSINWNCPCLGGMATGPCGVQFREAFSCFHYSTD-EPKGVNCFEAFKTM 293
P PG DG IN+ C C+G + PCG +FREA +C ++D E + C + +
Sbjct: 38 PSNNPGPTTADGQINFECHCVGHLVGSPCGFEFREAITCQKTNSDGEIEQGACGKELMSF 97
Query: 294 QDCMAQ 299
+C+ +
Sbjct: 98 MECVTR 103
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 31 PEPQPGLILPDGSINWNCPCLGGMATGPCGVQFREAFSCFHYSTD 75
P PG DG IN+ C C+G + PCG +FREA +C ++D
Sbjct: 38 PSNNPGPTTADGQINFECHCVGHLVGSPCGFEFREAITCQKTNSD 82
>sp|Q9CQH8|RPP14_MOUSE Ribonuclease P protein subunit p14 OS=Mus musculus GN=Rpp14 PE=2
SV=1
Length = 122
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 138 TGAGVPIDLLKFNPAQTRAILRCPASFFIKLQTSLTTCGYYNNHPARFITHRTSPCLLNL 197
GA +P+D+L ++ AILR +S +KL +SLT G Y + F + SP LL L
Sbjct: 53 VGAALPVDVLTYDEKTLSAILRICSSGLVKLWSSLTLFGAYKSKKCAFRVIQVSPFLLAL 112
>sp|Q5RB79|RPP14_PONAB Ribonuclease P protein subunit p14 OS=Pongo abelii GN=RPP14 PE=2
SV=3
Length = 124
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 140 AGVPIDLLKFNPAQTRAILRCPASFFIKLQTSLTTCGYYNNHPARFITHRTSPCLLNL 197
A +P+D+L + AILR +S +KL +SLT G Y F + SP LL L
Sbjct: 57 AALPLDILTYEEKTLSAILRICSSGLVKLWSSLTLLGSYKGKKCAFRVIQVSPFLLAL 114
>sp|O95059|RPP14_HUMAN Ribonuclease P protein subunit p14 OS=Homo sapiens GN=RPP14 PE=1
SV=3
Length = 124
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 140 AGVPIDLLKFNPAQTRAILRCPASFFIKLQTSLTTCGYYNNHPARFITHRTSPCLLNL 197
A +P+D+L + AILR +S +KL +SLT G Y F + SP LL L
Sbjct: 57 AALPLDILTYEEKTLSAILRICSSGLVKLWSSLTLLGSYKGKKCAFRVIQVSPFLLAL 114
>sp|Q0D5G4|Y7633_ORYSJ B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp.
japonica GN=Os07g0563300 PE=2 SV=2
Length = 955
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 177 YYNNHPARFITHRTSPCL--LNLLSRLTLTMSTCQREGKDFIIF-------ATKEDHAIP 227
+ NN+ ++ +PC+ + L + T+T S EGK + F A ++ P
Sbjct: 507 WPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRIDPEGKLVMGFRKATNLSAEQDQPTKP 566
Query: 228 SSVELPPPEPQPGLILPDGSINWNCP 253
++ LPPPE +++PD S N P
Sbjct: 567 ANGVLPPPEANNKVVVPDSSPNAAVP 592
>sp|P61701|SYA_GEOSL Alanine--tRNA ligase OS=Geobacter sulfurreducens (strain ATCC 51573
/ DSM 12127 / PCA) GN=alaS PE=3 SV=1
Length = 875
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 71 HYSTDEPKGDLRSTKSRATTILMCDGVLKSNETFKDWLSNIYRKSIQ 117
H D+ + + RATT L+CDGVL SNE L I R++ +
Sbjct: 267 HSEKDDVSMRVMADHVRATTFLICDGVLPSNEGRGYVLRRIMRRAAR 313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,116,041
Number of Sequences: 539616
Number of extensions: 6363135
Number of successful extensions: 25873
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 25742
Number of HSP's gapped (non-prelim): 102
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)