BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10710
(161 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ODY|E Chain E, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
pdb|2ODY|F Chain F, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
Length = 127
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 18/120 (15%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCLLP------ 107
C LP + G+C+ +FYFN TG+C F YGGC GN N F++ E+C C P
Sbjct: 6 CRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPERVNDF 65
Query: 108 ------------PEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
+ G C G +++++N +G+C F+YGGC GN N ++SEE+C CK
Sbjct: 66 ESADFKTGCEPAADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVCK 125
>pdb|1BIK|A Chain A, X-Ray Structure Of Bikunin From The Human
Inter-Alpha-Inhibitor Complex
Length = 147
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL------ 105
D C L G C G ++++N ++ C F YGGC GNGN F +E++C+ C
Sbjct: 24 DSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRTVAACN 83
Query: 106 LPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
LP G CR + Q + F+ G+CV F YGGC GNGN+F SE++C C
Sbjct: 84 LPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 132
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 40 CLQSLLFLYSVLDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEED 99
CLQ+ + C LP G CR + Q + F+ G+CV F YGGC GNGN+F SE++
Sbjct: 72 CLQTC----RTVAACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKE 127
Query: 100 CIHVCLLP 107
C C +P
Sbjct: 128 CREYCGVP 135
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
C L G C G ++++N ++ C F YGGC GNGN F +E++C++TC+
Sbjct: 26 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCR 77
>pdb|1KTH|A Chain A, The Anisotropic Refinement Of Kunitz Type Domain C5 At
0.95 Angstrom
pdb|1KNT|A Chain A, The 1.6 Angstroms Structure Of The Kunitz-Type Domain From
The Alpha3 Chain Of The Human Type Vi Collagen
pdb|2KNT|A Chain A, The 1.2 Angstrom Structure Of Kunitz Type Domain C5
pdb|1KUN|A Chain A, Solution Structure Of The Human Alpha3-Chain Type Vi
Collagen C-Terminal Kunitz Domain, Nmr, 20 Structures
Length = 58
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D+C LP + G CR + K+Y++P+T C +F YGGC GN N+F S+++C VC
Sbjct: 3 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 101 IHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
+C LP + G CR + K+Y++P+T C +F YGGC GN N+F S+++C + C
Sbjct: 2 TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55
>pdb|2JOT|A Chain A, Nuclear Magnetic Resonance Studies On Huwentoxin-Xi From
The Chinese Bird Spider Ornithoctonus Huwena
Length = 55
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 51 LDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+D C LP + G C+ F+++YFN T C +FIYGGC GNGN+F ++E C+ C
Sbjct: 1 IDTCRLPSDRGRCKASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRC 52
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 101 IHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
I C LP + G C+ F+++YFN T C +FIYGGC GNGN+F ++E C++ C
Sbjct: 1 IDTCRLPSDRGRCKASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRC 52
>pdb|4DTG|K Chain K, Hemostatic Effect Of A Monoclonal Antibody Mab 2021
Blocking The Interaction Between Fxa And Tfpi In A
Rabbit Hemophilia Model
Length = 66
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C ++C
Sbjct: 5 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 57
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C C+
Sbjct: 7 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE 58
>pdb|1TFX|C Chain C, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
pdb|1TFX|D Chain D, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
Length = 58
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C ++C
Sbjct: 3 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C C+
Sbjct: 5 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE 56
>pdb|3BYB|A Chain A, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|B Chain B, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|C Chain C, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3UIR|C Chain C, Crystal Structure Of The Plasmin-Textilinin-1 Complex
pdb|3UIR|D Chain D, Crystal Structure Of The Plasmin-Textilinin-1 Complex
Length = 59
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D C LP + G CR F FY+NP +C++FIYGGC GN N F ++E+C C
Sbjct: 5 DFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTC 57
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
C LP + G CR F FY+NP +C++FIYGGC GN N F ++E+C TC
Sbjct: 7 CELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCAA 59
>pdb|3D65|I Chain I, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom, In Complex With Trypsin
Length = 57
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D C LP + G CR F FY+NP +C++FIYGGC GN N F ++E+C C
Sbjct: 3 DFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTC 55
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
C LP + G CR F FY+NP +C++FIYGGC GN N F ++E+C TC
Sbjct: 5 CELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCAA 57
>pdb|1QLQ|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant With
Altered Binding Loop Sequence
pdb|1G6X|A Chain A, Ultra High Resolution Structure Of Bovine Pancreatic
Trypsin Inhibitor (Bpti) Mutant With Altered Binding
Loop Sequence
pdb|1K6U|A Chain A, Crystal Structure Of Cyclic Bovine Pancreatic Trypsin
Inhibitor
Length = 58
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1ADZ|A Chain A, The Solution Structure Of The Second Kunitz Domain Of
Tissue Factor Pathway Inhibitor, Nmr, 30 Structures
Length = 71
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCLLPP 108
C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C ++C P
Sbjct: 14 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGP 68
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C C+
Sbjct: 14 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE 65
>pdb|1UUB|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor Mutant, 3-58 Bpti (K15r, R17a, R42s)
Length = 56
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 3 CLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTCGGA 56
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 1 DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTC 53
>pdb|1AAP|A Chain A, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1AAP|B Chain B, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1TAW|B Chain B, Bovine Trypsin Complexed To Appi
Length = 58
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 50 VLDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
V +VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ VC
Sbjct: 1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ C
Sbjct: 3 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|1BRC|I Chain I, Relocating A Negative Charge In The Binding Pocket Of
Trypsin
Length = 56
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 50 VLDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
V +VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ VC
Sbjct: 1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ C
Sbjct: 3 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|1BUN|B Chain B, Structure Of Beta2-Bungarotoxin: Potassium Channel Binding
By Kunitz Modules And Targeted Phospholipase Action
Length = 61
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
C PP+ +C+ + FY+ PS +CVQF YGGCNGNGN F S+ C CL
Sbjct: 7 CDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECL 58
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDC 150
C PP+ +C+ + FY+ PS +CVQF YGGCNGNGN F S+ C
Sbjct: 7 CDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLC 53
>pdb|1CO7|I Chain I, R117h Mutant Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
Length = 99
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 39 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 92
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC+ C
Sbjct: 37 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 89
>pdb|4TPI|I Chain I, The Refined 2.2-angstroms (0.22-nm) X-ray Crystal
Structure Of The Ternary Complex Formed By Bovine
Trypsinogen, Valine-valine And The Arg15 Analogue Of
Bovine Pancreatic Trypsin Inhibitor
Length = 58
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1IRH|A Chain A, The Solution Structure Of The Third Kunitz Domain Of
Tissue Factor Pathway Inhibitor
Length = 61
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
CL P + GLCR +FY+N G+C F Y GC GN N F S+++C+R CK
Sbjct: 8 CLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACK 59
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
CL P + GLCR +FY+N G+C F Y GC GN N F S+++C+ C
Sbjct: 8 CLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRAC 58
>pdb|3P95|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor Variant (Bpti-K15rR17D)
Length = 58
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1ZJD|B Chain B, Crystal Structure Of The Catalytic Domain Of Coagulation
Factor Xi In Complex With Kunitz Protease Inhibitor
Domain Of Protease Nexin Ii
Length = 57
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ VC
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ C
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|3P92|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor Variant (Bpti-K15rR17G)
Length = 58
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1CA0|D Chain D, Bovine Chymotrypsin Complexed To Appi
pdb|1CA0|I Chain I, Bovine Chymotrypsin Complexed To Appi
Length = 54
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ VC
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ C
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|1UUA|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor, 3-58 Bpti
Length = 56
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 3 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 56
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC+ C
Sbjct: 1 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 53
>pdb|1TPA|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2KAI|I Chain I, Refined 2.5 Angstroms X-Ray Crystal Structure Of The
Complex Formed By Porcine Kallikrein A And The Bovine
Pancreatic Trypsin Inhibitor. Crystallization, Patterson
Search, Structure Determination, Refinement, Structure
And Comparison With Its Components And With The Bovine
Trypsin- Pancreatic Trypsin Inhibitor Complex
pdb|2PTC|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2TGP|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|3TPI|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|1MTN|D Chain D, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1MTN|H Chain H, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1CBW|D Chain D, Bovine Chymotrypsin Complexed To Bpti
pdb|1CBW|I Chain I, Bovine Chymotrypsin Complexed To Bpti
pdb|1BTH|P Chain P, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1BTH|Q Chain Q, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|A Chain A, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|B Chain B, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|C Chain C, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|D Chain D, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|E Chain E, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|1BHC|A Chain A, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|B Chain B, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|C Chain C, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|D Chain D, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|E Chain E, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|F Chain F, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|G Chain G, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|H Chain H, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|I Chain I, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|J Chain J, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BZX|I Chain I, The Crystal Structure Of Anionic Salmon Trypsin In Complex
With Bovine Pancreatic Trypsin Inhibitor
pdb|1B0C|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|3BTK|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1D0D|B Chain B, Crystal Structure Of Tick Anticoagulant Protein Complexed
With Bovine Pancreatic Trypsin Inhibitor
pdb|1FY8|I Chain I, Crystal Structure Of The Deltaile16val17 Rat Anionic
Trypsinogen-Bpti Complex
pdb|1EAW|B Chain B, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|1EAW|D Chain D, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|2FTL|I Chain I, Crystal Structure Of Trypsin Complexed With Bpti At 100k
pdb|2IJO|I Chain I, Crystal Structure Of The West Nile Virus Ns2b-Ns3 Protease
Complexed With Bovine Pancreatic Trypsin Inhibitor
pdb|1BPI|A Chain A, The Structure Of Bovine Pancreatic Trypsin Inhibitor At
125k: Definition Of Carboxyl-Terminal Residues
Glycine-57 And Alanine-58
pdb|4PTI|A Chain A, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|6PTI|A Chain A, Structure Of Form Iii Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2TPI|I Chain I, On The Disordered Activation Domain In Trypsinogen.
Chemical Labelling And Low-Temperature Crystallography
pdb|1OA5|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|1OA6|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|2R9P|I Chain I, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|F Chain F, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|G Chain G, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2RA3|I Chain I, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|2RA3|C Chain C, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|3FP6|I Chain I, Anionic Trypsin In Complex With Bovine Pancreatic Trypsin
Inhibitor (Bpti) Determined To The 1.49 A Resolution
Limit
pdb|3FP8|I Chain I, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Determined To The
1.46 A Resolution Limit
pdb|3GYM|I Chain I, Structure Of Prostasin In Complex With Aprotinin
pdb|3GYM|J Chain J, Structure Of Prostasin In Complex With Aprotinin
pdb|3LDI|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3U1J|E Chain E, Aprotinin Bound To Dengue Virus Protease
pdb|4DG4|E Chain E, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|C Chain C, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|F Chain F, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|H Chain H, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
Length = 58
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3TGI|I Chain I, Wild-Type Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
pdb|3TGJ|I Chain I, S195a Trypsinogen Complexed With Bovine Pancreatic Trypsin
Inhibitor (Bpti)
pdb|1F5R|I Chain I, Rat Trypsinogen Mutant Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1F7Z|I Chain I, Rat Trypsinogen K15a Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|3TGK|I Chain I, Trypsinogen Mutant D194n And Deletion Of Ile 16-Val 17
Complexed With Bovine Pancreatic Trypsin Inhibitor
(Bpti)
Length = 65
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1PIT|A Chain A, Determination Of A High-Quality Nuclear Magnetic Resonance
Solution Structure Of The Bovine Pancreatic Trypsin
Inhibitor And Comparison With Three Crystal Structures
pdb|5PTI|A Chain A, Structure Of Bovine Pancreatic Trypsin Inhibitor. Results
Of Joint Neutron And X-Ray Refinement Of Crystal Form Ii
pdb|3OTJ|I Chain I, A Crystal Structure Of Trypsin Complexed With Bpti (Bovine
Pancreatic Trypsin Inhibitor) By X-RayNEUTRON JOINT
REFINEMENT
Length = 58
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1LD5|A Chain A, Structure Of Bpti Mutant A16v
Length = 58
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|2DDI|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human Wfikkn1
pdb|2DDJ|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human Wfikkn1
Length = 70
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D C+LP G CRG+ ++ ++P QC F+YGGC GNGN F S E C C
Sbjct: 8 DACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 60
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 95 DSEEDCIHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
++E + C+LP G CRG+ ++ ++P QC F+YGGC GNGN F S E C C
Sbjct: 1 EAEAEFTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 60
>pdb|1EJM|B Chain B, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|D Chain D, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|F Chain F, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
Length = 58
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3L33|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
pdb|3L33|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
pdb|3L33|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
pdb|3L33|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor(Appi)
Length = 52
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 53 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ VC
Sbjct: 1 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ C
Sbjct: 1 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52
>pdb|3BTQ|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTH|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8M|B Chain B, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8M|D Chain D, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3L3T|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
pdb|3L3T|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
pdb|3L3T|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
pdb|3L3T|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor Protein
Inhibitor Variant (Appir15k)
Length = 57
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+VC E G C+ ++YF+ + G+C F YGGC GN N FD+EE C+ VC
Sbjct: 1 EVCSEQAETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
VC E G C+ ++YF+ + G+C F YGGC GN N FD+EE C+ C
Sbjct: 1 EVCSEQAETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|1YC0|I Chain I, Short Form Hgfa With First Kunitz Domain From Hai-1
Length = 75
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL + G CRG F ++Y++P+ C F+YGGC GN N + EE+CI C+G
Sbjct: 22 CLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRGV 75
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL + G CRG F ++Y++P+ C F+YGGC GN N + EE+CI C
Sbjct: 20 DYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 72
>pdb|3BTE|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta-Trypsin And Ten P1 Variants Of Bpti.
pdb|1T7C|B Chain B, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T7C|D Chain D, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1T8L|B Chain B, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8L|D Chain D, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 59
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 6 CLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 59
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 4 DFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 56
>pdb|1BTI|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++ +N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++ +N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3BTM|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTT|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8N|B Chain B, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8N|D Chain D, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCTARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCTARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|9PTI|A Chain A, Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized)
Length = 58
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N F S EDC RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTCGGA 58
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTC 55
>pdb|1YKT|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
CL PP G C+ ++++N G C F+YGGC N F S EDC+RTC
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1JV8|A Chain A, Nmr Structure Of Bpti Mutant G37a
pdb|1JV9|A Chain A, Nmr Structure Of Bpti Mutant G37a
Length = 58
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YG C N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTCGGA 58
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YG C N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTC 55
>pdb|1BPT|A Chain A, Crevice-Forming Mutants Of Bpti: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ +++ N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ +++ N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3BTW|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8O|B Chain B, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8O|D Chain D, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCWARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCWARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTD|I Chain I, The Crystal Structures Of The Complexes Between The Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1P2J|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCLARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCLARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1P2K|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTG|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1P2I|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCGARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCGARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1FAK|I Chain I, Human Tissue Factor Complexed With Coagulation Factor Viia
Inhibited With A Bpti-Mutant
Length = 55
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
CL PP G CR ++++N G C F YGGC N F+S EDC+RTC
Sbjct: 5 CLEPPYDGPCRALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F YGGC N F+S EDC+ C
Sbjct: 3 DFCLEPPYDGPCRALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55
>pdb|3BTF|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti.
pdb|1P2Q|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2Q|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCFARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA 58
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCFARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1NAG|A Chain A, Crevice-forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTCGGA 58
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTC 55
>pdb|1FAN|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGGC N S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTCGGA 58
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGGC N S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTC 55
>pdb|2FI4|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser) In
Complex With Trypsin
Length = 58
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G + ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G + ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|2FI5|I Chain I, Crystal Structure Of A Bpti Variant (Cys38->ser) In
Complex With Trypsin
Length = 58
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+YGG N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCGGA 58
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+YGG N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|1ZR0|B Chain B, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
pdb|1ZR0|D Chain D, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
Length = 63
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
++CLLP + G CR ++Y++ T C QF+YGGC GN N F + E C C
Sbjct: 7 EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
+CLLP + G CR ++Y++ T C QF+YGGC GN N F + E C C
Sbjct: 7 EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59
>pdb|2FTM|B Chain B, Crystal Structure Of Trypsin Complexed With The Bpti
Variant (Tyr35- >gly)
pdb|8PTI|A Chain A, Crystal Structure Of A Y35g Mutant Of Bovine Pancreatic
Trypsin Inhibitor
Length = 58
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G C F+ GGC N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTCGGA 58
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G C F+ GGC N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTC 55
>pdb|1JC6|A Chain A, Solution Structure Of Bungarus Faciatus Ix, A Kunitz-Type
Chymotrypsin Inhibitor
Length = 65
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGTY 158
C L PE G C FY+N +C +F YGGC GN N F + ++C RTC Y
Sbjct: 7 CNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAKY 61
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
C L PE G C FY+N +C +F YGGC GN N F + ++C C
Sbjct: 7 CNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57
>pdb|1DTX|A Chain A, Crystal Structure Of Alpha-Dendrotoxin From The Green
Mamba Venom And Its Comparison With The Structure Of
Bovine Pancreatic Trypsin Inhibitor
Length = 59
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
+C+L PG C FY+N QC +F + GC GN NRF + E+C RTC G
Sbjct: 6 LCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG 59
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
+C+L PG C FY+N QC +F + GC GN NRF + E+C C+
Sbjct: 5 KLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58
>pdb|7PTI|A Chain A, Structural Effects Induced By Removal Of A Disulfide
Bridge. The X-Ray Structure Of The C30a(Slash)c51a
Mutant Of Basic Pancreatic Trypsin Inhibitor At 1.6
Angstroms
Length = 58
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G F+YGGC N F S ED +RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTCGGA 58
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G F+YGGC N F S ED + C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTC 55
>pdb|1AAL|A Chain A, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
pdb|1AAL|B Chain B, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
Length = 58
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G C+ ++++N G F+YGGC N F S ED +RTC G
Sbjct: 5 CLEPPYTGPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTCGGA 58
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G C+ ++++N G F+YGGC N F S ED + C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTC 55
>pdb|1DEM|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
pdb|1DEN|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
Length = 60
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
+C+L PG C FY+N QC F + GC GN NRF + E+C RTC
Sbjct: 6 LCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTC 57
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 50 VLDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
+ +C+L PG C FY+N QC F + GC GN NRF + E+C C+
Sbjct: 3 LRKLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTCI 58
>pdb|2FI3|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser,
Cys38->ser) In Complex With Trypsin
Length = 58
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G + ++++N G C F+YGG N F S EDC+RTC G
Sbjct: 5 CLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCGGA 58
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G + ++++N G C F+YGG N F S EDC+ C
Sbjct: 3 DFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|1DTK|A Chain A, The Nmr Solution Structure Of Dendrotoxin K From The Venom
Of Dendroaspis Polylepis Polylepis
Length = 57
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
C LP G C+ FY+ QC+ F Y GC GN NRF + E+C RTC G
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG 57
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
C LP G C+ FY+ QC+ F Y GC GN NRF + E+C C+
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV 56
>pdb|1BRB|I Chain I, Crystal Structures Of Rat Anionic Trypsin Complexed With
The Protein Inhibitors Appi And Bpti
Length = 58
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 107 PPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
PP G C+ ++++N G C F+YGGC N F S EDC+RT G
Sbjct: 8 PPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTAGGA 58
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHV 103
D PP G C+ ++++N G C F+YGGC N F S EDC+
Sbjct: 3 DFAGEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRT 54
>pdb|2ZJX|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Containing Only
The [5,55] Disulfide Bond
pdb|2ZJX|B Chain B, Bovine Pancreatic Trypsin Inhibitor (Bpti) Containing Only
The [5,55] Disulfide Bond
Length = 58
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G + ++++N G F+YGG N F S ED +RTC G
Sbjct: 5 CLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGARAKRNNFKSAEDALRTCGGA 58
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G + ++++N G F+YGG N F S ED + C
Sbjct: 3 DFCLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGARAKRNNFKSAEDALRTC 55
>pdb|2ZVX|A Chain A, Structure Of A Bpti-[5,55] Variant Containing GlyVAL AT
THE 1438TH POSITIONS
pdb|2ZVX|B Chain B, Structure Of A Bpti-[5,55] Variant Containing GlyVAL AT
THE 1438TH POSITIONS
Length = 58
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G + ++++N G F+YGG N F S ED +RTC G
Sbjct: 5 CLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGVRAKRNNFKSAEDALRTCGGA 58
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G + ++++N G F+YGG N F S ED + C
Sbjct: 3 DFCLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGVRAKRNNFKSAEDALRTC 55
>pdb|1BF0|A Chain A, Calcicludine (Cac) From Green Mamba Dendroaspis
Angusticeps, Nmr, 15 Structures
Length = 60
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
C P G C+ F FYF + +C+ F++ GC GN NRF + +C + C G
Sbjct: 7 CKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLGK 60
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
C P G C+ F FYF + +C+ F++ GC GN NRF + +C CL
Sbjct: 7 CKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCL 58
>pdb|3FP7|J Chain J, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Cleaved At The
Scissile Bond (Lys15-Ala16) Determined To The 1.46 A
Resolution Limit
Length = 43
Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 119 KFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 5 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 42
Score = 40.4 bits (93), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 69 KFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
++++N G C F+YGGC N F S EDC+ C
Sbjct: 5 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 40
>pdb|2KCR|A Chain A, Solution Structure Of Anntoxin
Length = 61
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
+ C L G G F +Y++ +T C F Y G GNGNRF + EDC TC
Sbjct: 5 YRCQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATC 57
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCLLPP 108
C L G G F +Y++ +T C F Y G GNGNRF + EDC C+
Sbjct: 7 CQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATCVTAE 61
>pdb|3OFW|A Chain A, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Carribean Sea Anemone
Stichodactyla Helianthus
Length = 60
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCLL 106
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C +C L
Sbjct: 5 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRL 59
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C C+
Sbjct: 6 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 58
>pdb|1LD6|A Chain A, Structure Of Bpti_8a Mutant
Length = 58
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGT 157
CL PP G CR ++++N G C F YG C N F S EDC+RTC G
Sbjct: 5 CLEPPYAGACRAAAARYFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTCGGA 58
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F YG C N F S EDC+ C
Sbjct: 3 DFCLEPPYAGACRAAAARYFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTC 55
>pdb|3M7Q|B Chain B, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Pancreatic Trypsin
Length = 61
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C +C
Sbjct: 5 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 57
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C C+
Sbjct: 6 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRA 59
>pdb|1SHP|A Chain A, The Nmr Solution Structure Of A Kunitz-Type Proteinase
Inhibitor From The Sea Anemone Stichodactyla Helianthus
Length = 55
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C +C
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C C+
Sbjct: 2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRA 55
>pdb|3T62|D Chain D, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|E Chain E, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|F Chain F, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
Length = 54
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C +C
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C C+
Sbjct: 2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 54
>pdb|1YLC|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 105 LLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRT 153
L PP G C+ ++++N G F+YGGC N F S ED +RT
Sbjct: 6 LEPPYTGPCKARIIRYFYNAKAGLXQTFVYGGCRAKRNNFKSAEDXMRT 54
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHV 103
D L PP G C+ ++++N G F+YGGC N F S ED +
Sbjct: 3 DFXLEPPYTGPCKARIIRYFYNAKAGLXQTFVYGGCRAKRNNFKSAEDXMRT 54
>pdb|1Y62|A Chain A, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|B Chain B, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|C Chain C, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|D Chain D, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|E Chain E, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|1Y62|F Chain F, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel Kunitz-
Fold Cone Snail Neurotoxin.
pdb|2CA7|A Chain A, Conkunitzin-S1 Is The First Member Of A New Kunitz-Type
Neurotoxin Family- Structural And Functional
Characterization
Length = 60
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 98 EDCIHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
+D +C LP + G ++ Y+N + QC++F Y G GN N F DC RTC
Sbjct: 1 KDRPSLCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTC 57
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 53 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
+C LP + G ++ Y+N + QC++F Y G GN N F DC CL
Sbjct: 6 LCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTCL 58
>pdb|1YLD|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 105 LLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRT 153
L PP G C+ ++++N G F+YGGC N F S ED +RT
Sbjct: 6 LEPPYTGPCKARIIRYFYNAPDGLXQTFVYGGCRAKRNNFKSAEDXMRT 54
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHV 103
D L PP G C+ ++++N G F+YGGC N F S ED +
Sbjct: 3 DFXLEPPYTGPCKARIIRYFYNAPDGLXQTFVYGGCRAKRNNFKSAEDXMRT 54
>pdb|3UOU|B Chain B, Crystal Structure Of The Kunitz-Type Protease Inhibitor
Shpi-1 Lys13leu Mutant In Complex With Pancreatic
Elastase
Length = 55
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+C P + G C GYF +FYF+ TG+C FIYGGC GNGN F++ C +C
Sbjct: 1 SICSEPKKVGRCLGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
+C P + G C GYF +FYF+ TG+C FIYGGC GNGN F++ C C+
Sbjct: 2 ICSEPKKVGRCLGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRA 55
>pdb|2J6D|A Chain A, Conkunitzin-S2 - Cone Snail Neurotoxin - Denovo Structure
Length = 65
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCLLP 107
C LP + G Q+ Y+N + QCV F Y G GNGN F DC C P
Sbjct: 10 CNLPADSGSGTKPEQRIYYNSAKKQCVTFTYNGKGGNGNNFSRTNDCRQTCQYP 63
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 98 EDCIHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
+D C LP + G Q+ Y+N + QCV F Y G GNGN F DC +TC+
Sbjct: 4 KDRPSYCNLPADSGSGTKPEQRIYYNSAKKQCVTFTYNGKGGNGNNFSRTNDCRQTCQ 61
>pdb|3AUD|A Chain A, Simplified Bpti Variant With Poly Asn Amino Acid Tag
(C5n) At The C- Terminus
pdb|3AUD|B Chain B, Simplified Bpti Variant With Poly Asn Amino Acid Tag
(C5n) At The C- Terminus
pdb|3AUD|C Chain C, Simplified Bpti Variant With Poly Asn Amino Acid Tag
(C5n) At The C- Terminus
Length = 65
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQTFVYGGVRAKRNNF 45
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQTFVYGGVRAKRNNF 45
>pdb|3AUC|A Chain A, A Simplified Bpti Variant With Poly Ser (C5s) Amino Acid
Tag At The C- Terminus
pdb|3AUC|B Chain B, A Simplified Bpti Variant With Poly Ser (C5s) Amino Acid
Tag At The C- Terminus
Length = 65
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQTFVYGGVRAKRNNF 45
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQTFVYGGVRAKRNNF 45
>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type
Peptidylprolyl Isomerase
Length = 135
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 73 NPSTGQCVQFIYGGCNGNGNRFDSEED 99
P+TG V+ Y G NG +FDS D
Sbjct: 29 KPTTGTTVKVHYVGTLENGTKFDSSRD 55
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 123 NPSTGQCVQFIYGGCNGNGNRFDSEED 149
P+TG V+ Y G NG +FDS D
Sbjct: 29 KPTTGTTVKVHYVGTLENGTKFDSSRD 55
>pdb|3CI7|A Chain A, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
pdb|3CI7|B Chain B, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
pdb|3CI7|C Chain C, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
pdb|3CI7|D Chain D, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
Length = 58
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGARAKRNNF 45
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGARAKRNNF 45
>pdb|3AUG|A Chain A, A Simplified Bpti Variant With Poly Pro Amino Acid Tag
(C5p) At The C- Terminus
pdb|3AUG|C Chain C, A Simplified Bpti Variant With Poly Pro Amino Acid Tag
(C5p) At The C- Terminus
Length = 65
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|3AUE|A Chain A, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|B Chain B, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|C Chain C, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|D Chain D, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|E Chain E, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|F Chain F, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|G Chain G, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|H Chain H, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
Length = 65
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|3AUB|A Chain A, A Simplified Bpti Variant Stabilized By The A14g And
A38v Substitutions
pdb|3AUB|B Chain B, A Simplified Bpti Variant Stabilized By The A14g And
A38v Substitutions
Length = 58
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|2LFK|A Chain A, Nmr Solution Structure Of Native Tdpi-Short
pdb|2LFL|A Chain A, Nmr Solution Structure Of The Intermediate Iiib Of
Tdpi-Short
Length = 57
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 95 DSEEDCIHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
D EE + + P GLC+ F ++Y G C + +Y GC G + +C R C
Sbjct: 2 DKEECTVPIGWSEPVKGLCKARFTRYY---CMGNCCK-VYEGCYTGG--YSRMGECARNC 55
Query: 155 KG 156
G
Sbjct: 56 PG 57
>pdb|3AUI|A Chain A, A Simplified Bpti Variant With Poly Glu Amino Acid Tag
(C3e) At The C- Terminus
pdb|3AUI|B Chain B, A Simplified Bpti Variant With Poly Glu Amino Acid Tag
(C3e) At The C- Terminus
Length = 63
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|3AUH|A Chain A, A Simplified Bpti Variant With Poly Arg Amino Acid Tag
(C3r) At The C- Terminus
pdb|3AUH|C Chain C, A Simplified Bpti Variant With Poly Arg Amino Acid Tag
(C3r) At The C- Terminus
pdb|3AUH|E Chain E, A Simplified Bpti Variant With Poly Arg Amino Acid Tag
(C3r) At The C- Terminus
pdb|3AUH|G Chain G, A Simplified Bpti Variant With Poly Arg Amino Acid Tag
(C3r) At The C- Terminus
Length = 63
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 94
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRF 144
CL PP G + ++++N + G F+YGG N F
Sbjct: 5 CLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|1YAT|A Chain A, Improved Calcineurin Inhibition By Yeast Fkbp12-Drug
Complexes. Crystallographic And Functional Analysis
Length = 113
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 74 PSTGQCVQFIYGGCNGNGNRFDSEED 99
P TG V Y G NG +FDS D
Sbjct: 22 PKTGDLVTIHYTGTLENGQKFDSSVD 47
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 124 PSTGQCVQFIYGGCNGNGNRFDSEED 149
P TG V Y G NG +FDS D
Sbjct: 22 PKTGDLVTIHYTGTLENGQKFDSSVD 47
>pdb|1TXZ|A Chain A, Crystal Structure Of Yeast Ymx7, An
Adp-ribose-1''-monophosphatase, Complexed With
Adp-ribose
pdb|1TY8|A Chain A, Crystal Structure Of Yeast Ymx7, An
Adp-Ribose-1''-Monophosphatase, Complexed With Adp
Length = 284
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 25 NDKNPLRVGIEP---ATWCLQSLLFLYSVLDVCLLPPEPGLCRGY 66
N +NPL+ G EP A W +L+ +D ++ PGLC GY
Sbjct: 158 NPQNPLKTGFEPVFNAMW--NALMHSPKDIDGLII---PGLCTGY 197
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.146 0.501
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,973,014
Number of Sequences: 62578
Number of extensions: 269860
Number of successful extensions: 718
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 535
Number of HSP's gapped (non-prelim): 185
length of query: 161
length of database: 14,973,337
effective HSP length: 91
effective length of query: 70
effective length of database: 9,278,739
effective search space: 649511730
effective search space used: 649511730
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 47 (22.7 bits)