RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10710
(161 letters)
>d1jc6a_ g.8.1.1 (A:) Venom basic protease inhibitor IX (VIIIb)
{Banded krait (Bungarus fasciatus) [TaxId: 8613]}
Length = 65
Score = 81.1 bits (200), Expect = 7e-22
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKGTY 158
C L PE G C FY+N +C +F YGGC GN N F + ++C RTC Y
Sbjct: 6 FCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAKY 61
Score = 78.8 bits (194), Expect = 6e-21
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
C L PE G C FY+N +C +F YGGC GN N F + ++C C
Sbjct: 5 TFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57
>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis
angusticeps) [TaxId: 8618]}
Length = 59
Score = 80.3 bits (198), Expect = 1e-21
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 102 HVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
+C+L PG C FY+N QC +F + GC GN NRF + E+C RTC G
Sbjct: 5 KLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG 59
Score = 79.1 bits (195), Expect = 4e-21
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
+C+L PG C FY+N QC +F + GC GN NRF + E+C C+
Sbjct: 5 KLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58
>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla
helianthus) [TaxId: 6123]}
Length = 55
Score = 79.5 bits (196), Expect = 2e-21
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C C+
Sbjct: 2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICR 54
Score = 76.5 bits (188), Expect = 4e-20
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 53 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
+C P + G C+GYF +FYF+ TG+C FIYGGC GNGN F++ C +C
Sbjct: 2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos
taurus) [TaxId: 9913]}
Length = 58
Score = 79.5 bits (196), Expect = 3e-21
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
CL PP G CR ++++N G C F+YGGC N F S EDC+RTC G
Sbjct: 4 FCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 77.2 bits (190), Expect = 2e-20
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D CL PP G CR ++++N G C F+YGGC N F S EDC+ C
Sbjct: 3 DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3
chain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 79.5 bits (196), Expect = 3e-21
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
+C LP + G CR + K+Y++P+T C +F YGGC GN N+F S+++C + C
Sbjct: 4 ICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP 57
Score = 78.0 bits (192), Expect = 1e-20
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D+C LP + G CR + K+Y++P+T C +F YGGC GN N+F S+++C VC
Sbjct: 3 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55
>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 79.2 bits (195), Expect = 4e-21
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
++CLLP + G CR ++Y++ T C QF+YGGC GN N F + E C C
Sbjct: 7 EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACW 60
Score = 78.8 bits (194), Expect = 6e-21
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
+CLLP + G CR ++Y++ T C QF+YGGC GN N F + E C C
Sbjct: 8 ICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACW 60
>d1tfxc_ g.8.1.1 (C:) Tissue factor pathway inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 79.1 bits (195), Expect = 4e-21
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C C+
Sbjct: 4 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE 56
Score = 78.0 bits (192), Expect = 1e-20
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
D C L +PG+CRGY ++++N T QC +F YGGC GN N F++ E+C ++C
Sbjct: 3 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 56
Score = 78.7 bits (194), Expect = 5e-21
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 50 VLDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
V +VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ VC
Sbjct: 1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
Score = 78.0 bits (192), Expect = 9e-21
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
VC E G CR ++YF+ + G+C F YGGC GN N FD+EE C+ C
Sbjct: 4 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis
polylepis polylepis) [TaxId: 8620]}
Length = 57
Score = 78.7 bits (194), Expect = 6e-21
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
C LP G C+ FY+ QC+ F Y GC GN NRF + E+C RTC G
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG 57
Score = 76.0 bits (187), Expect = 6e-20
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
C LP G C+ FY+ QC+ F Y GC GN NRF + E+C C+
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV 56
>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor
complex {Human (Homo sapiens) [TaxId: 9606]}
Length = 54
Score = 78.4 bits (193), Expect = 7e-21
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
C L G C G ++++N ++ C F YGGC GNGN F +E++C++TC+
Sbjct: 2 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCR 53
Score = 75.3 bits (185), Expect = 1e-19
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
C L G C G ++++N ++ C F YGGC GNGN F +E++C+ C
Sbjct: 2 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 52
>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor
complex {Human (Homo sapiens) [TaxId: 9606]}
Length = 56
Score = 78.4 bits (193), Expect = 8e-21
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 101 IHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTC 154
+ C LP G CR + Q + F+ G+CV F YGGC GNGN+F SE++C C
Sbjct: 1 VAACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 54
Score = 76.8 bits (189), Expect = 3e-20
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 53 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
C LP G CR + Q + F+ G+CV F YGGC GNGN+F SE++C C
Sbjct: 3 ACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 54
>d1bf0a_ g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dendroaspis
angusticeps) [TaxId: 8618]}
Length = 60
Score = 78.4 bits (193), Expect = 9e-21
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCKG 156
C P G C+ F FYF + +C+ F++ GC GN NRF + +C + C G
Sbjct: 6 YCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG 59
Score = 76.8 bits (189), Expect = 3e-20
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 48 YSVLDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
+ C P G C+ F FYF + +C+ F++ GC GN NRF + +C CL
Sbjct: 1 WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCL 58
>d1irha_ g.8.1.1 (A:) Tissue factor pathway inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 61
Score = 78.0 bits (192), Expect = 1e-20
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 104 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
CL P + GLCR +FY+N G+C F Y GC GN N F S+++C+R CK
Sbjct: 8 CLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACK 59
Score = 76.4 bits (188), Expect = 4e-20
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVC 104
CL P + GLCR +FY+N G+C F Y GC GN N F S+++C+ C
Sbjct: 6 SWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRAC 58
>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain
{Many-banded krait (Bungarus multicinctus) [TaxId:
8616]}
Length = 61
Score = 78.0 bits (192), Expect = 1e-20
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 103 VCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRTCK 155
C PP+ +C+ + FY+ PS +CVQF YGGCNGNGN F S+ C C
Sbjct: 6 DCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECL 58
Score = 76.8 bits (189), Expect = 3e-20
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 52 DVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIHVCL 105
C PP+ +C+ + FY+ PS +CVQF YGGCNGNGN F S+ C CL
Sbjct: 5 PDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECL 58
>d1ldja3 e.40.1.1 (A:411-686) Cullin homolog 1, cul-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 276
Score = 26.5 bits (58), Expect = 1.8
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
Query: 54 CLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYG------GCNGNGNRFDSEEDCIHVCLL 106
LP E F FY + +G+ + ++Y N NR+ + + +L
Sbjct: 143 FALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAIL 201
>d1jmxa4 b.1.18.14 (A:364-494) Quinohemoprotein amine
dehydrogenase A chain, domains 4 and 5 {Pseudomonas
putida [TaxId: 303]}
Length = 131
Score = 24.8 bits (54), Expect = 3.5
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 26 DKNPLRVGIEPATWCLQ 42
+ PLR+G PA+W ++
Sbjct: 40 NGQPLRIGYLPASWKVE 56
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 210
Score = 25.2 bits (54), Expect = 4.0
Identities = 3/47 (6%), Positives = 8/47 (17%)
Query: 56 LPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIH 102
P + ++ + + D E
Sbjct: 85 WHPVLRTLKNRIEENTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGR 131
Score = 24.9 bits (53), Expect = 5.2
Identities = 4/48 (8%), Positives = 9/48 (18%)
Query: 106 LPPEPGLCRGYFQKFYFNPSTGQCVQFIYGGCNGNGNRFDSEEDCIRT 153
P + ++ + + D E R
Sbjct: 85 WHPVLRTLKNRIEENTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRC 132
>d1v74a_ d.243.1.1 (A:) Colicin D nuclease domain {Escherichia
coli [TaxId: 562]}
Length = 107
Score = 23.7 bits (51), Expect = 7.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 69 KFYFNPSTGQCV 80
K YFNP+T V
Sbjct: 66 KVYFNPNTMNVV 77
Score = 23.7 bits (51), Expect = 7.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 119 KFYFNPSTGQCV 130
K YFNP+T V
Sbjct: 66 KVYFNPNTMNVV 77
>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus
thermolithotrophicus [TaxId: 2186]}
Length = 151
Score = 24.0 bits (51), Expect = 8.7
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 77 GQCVQFIYGGCNGNGNRFDSEEDCIHVCLLPPEPGLCRGYFQKFYFNPSTGQCVQFIYGG 136
G ++ Y G +G+ FD+ + + P R Y + F GQ +Q
Sbjct: 5 GVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPD--REY-EPLEFVVGEGQLIQGFEEA 61
Query: 137 CN 138
Sbjct: 62 VL 63
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT
{Helicobacter pylori [TaxId: 210]}
Length = 349
Score = 24.2 bits (52), Expect = 9.3
Identities = 18/130 (13%), Positives = 35/130 (26%), Gaps = 18/130 (13%)
Query: 23 EKNDKNPLRVGIEPATWCLQSLLFLYSVLDVCLLPPEPGLCRGYFQKFYFNPSTGQCVQF 82
K N L +P+ + L +V++ P + G NP+ F
Sbjct: 143 YKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFAS----FVASNPNAPIRNAF 198
Query: 83 I-----YGGCNGNGNRFDSEEDCIHVCL---------LPPEPGLCRGYFQKFYFNPSTGQ 128
G G+ ++ + L E GY + +
Sbjct: 199 YDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSH 258
Query: 129 CVQFIYGGCN 138
+ +G +
Sbjct: 259 TIPIYWGSPS 268
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.146 0.501
Gapped
Lambda K H
0.267 0.0549 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 683,639
Number of extensions: 33743
Number of successful extensions: 153
Number of sequences better than 10.0: 1
Number of HSP's gapped: 151
Number of HSP's successfully gapped: 51
Length of query: 161
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 83
Effective length of database: 1,336,656
Effective search space: 110942448
Effective search space used: 110942448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 49 (23.1 bits)