BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy10711
MFIITFISYRIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMT
AAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQ
QDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST
FEVFSNVSLPLPSNDYCSLRVSF

High Scoring Gene Products

Symbol, full name Information P value
Ubpy
UBPY ortholog
protein from Drosophila melanogaster 3.4e-37
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 4.6e-34
Usp8
ubiquitin specific peptidase 8
gene from Rattus norvegicus 6.0e-32
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 2.6e-31
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 4.2e-29
I3LRX7
Uncharacterized protein
protein from Sus scrofa 1.5e-28
Usp15
ubiquitin specific peptidase 15
gene from Rattus norvegicus 6.7e-28
Usp15
ubiquitin specific peptidase 15
protein from Mus musculus 7.1e-28
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 8.8e-28
usp4
ubiquitin specific protease 4 (proto-oncogene)
gene_product from Danio rerio 1.2e-27
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.4e-27
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 1.5e-27
USP15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Homo sapiens 1.5e-27
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.5e-27
LOC100737425
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 1.5e-27
usp15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Xenopus (Silurana) tropicalis 1.9e-27
USP15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Bos taurus 2.3e-27
Usp4
ubiquitin specific peptidase 4 (proto-oncogene)
protein from Mus musculus 2.4e-27
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Bos taurus 2.4e-27
Usp4
ubiquitin specific peptidase 4 (proto-oncogene)
gene from Rattus norvegicus 3.0e-27
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Homo sapiens 3.0e-27
LOC100512072
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 3.0e-27
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Pongo abelii 3.0e-27
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 6.3e-27
Usp8
ubiquitin specific peptidase 8
protein from Mus musculus 7.7e-27
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 7.8e-27
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 1.6e-26
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 2.4e-26
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.8e-26
USP8
Ubiquitin carboxyl-terminal hydrolase 8
protein from Homo sapiens 2.8e-26
F1RYL9
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 3.4e-26
usp11
ubiquitin specific peptidase 11
gene_product from Danio rerio 6.1e-26
USP50
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 1.8e-25
Usp50
ubiquitin specific peptidase 50
protein from Mus musculus 1.8e-25
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 3.4e-25
Usp21
ubiquitin specific peptidase 21
gene from Rattus norvegicus 3.4e-25
Usp21
ubiquitin specific peptidase 21
protein from Mus musculus 3.4e-25
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Gallus gallus 3.6e-25
LOC100156336
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 3.6e-25
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 4.8e-25
USP21
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 5.5e-25
USP21
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 5.5e-25
USP21
Ubiquitin carboxyl-terminal hydrolase 21
protein from Homo sapiens 5.5e-25
LOC100152455
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 5.5e-25
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 5.5e-25
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 5.5e-25
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 5.8e-25
USP50
Uncharacterized protein
protein from Canis lupus familiaris 5.9e-25
USP21
Ubiquitin carboxyl-terminal hydrolase 21
protein from Bos taurus 7.0e-25
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 8.1e-25
Usp11
ubiquitin specific peptidase 11
protein from Mus musculus 8.1e-25
usp2a
ubiquitin specific peptidase 2a
gene_product from Danio rerio 8.5e-25
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 8.6e-25
DDB_G0293770
putative ubiquitin carboxyl-terminal hydrolase (UCH)
gene from Dictyostelium discoideum 1.1e-24
LOC100520041
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 3.3e-24
UBP12
Ubiquitin-specific protease
gene from Saccharomyces cerevisiae 4.7e-24
USP2
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 6.8e-24
Gga.30068
Uncharacterized protein
protein from Gallus gallus 1.4e-23
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Bos taurus 1.8e-23
cyk-3 gene from Caenorhabditis elegans 1.9e-23
USP2
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.3e-23
LOC100520041
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 2.3e-23
Usp2
ubiquitin specific peptidase 2
protein from Mus musculus 2.3e-23
UBP10
AT4G10590
protein from Arabidopsis thaliana 3.2e-23
usp8
ubiquitin specific peptidase 8
gene_product from Danio rerio 3.4e-23
Usp2
ubiquitin specific peptidase 2
gene from Rattus norvegicus 3.9e-23
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Homo sapiens 4.8e-23
UBP9
AT4G10570
protein from Arabidopsis thaliana 5.4e-23
DOA4 gene_product from Candida albicans 1.1e-22
DOA4
Ubiquitin carboxyl-terminal hydrolase
protein from Candida albicans SC5314 1.1e-22
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 1.1e-22
Usp19
ubiquitin specific peptidase 19
gene from Rattus norvegicus 1.2e-22
Usp19
ubiquitin specific peptidase 19
protein from Mus musculus 1.2e-22
USP19
Ubiquitin carboxyl-terminal hydrolase 19
protein from Homo sapiens 1.5e-22
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 1.5e-22
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 1.6e-22
LAMC1
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 1.7e-22
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 1.7e-22
usp33
Ubiquitin carboxyl-terminal hydrolase 33
protein from Xenopus (Silurana) tropicalis 1.8e-22
usp33
ubiquitin specific peptidase 33
gene_product from Danio rerio 2.4e-22
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.5e-22
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.5e-22
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.8e-22
CG8334 protein from Drosophila melanogaster 4.5e-22
USP49
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 5.9e-22
USP44
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 6.1e-22
USP50
Inactive ubiquitin carboxyl-terminal hydrolase 50
protein from Homo sapiens 7.0e-22
H34C03.2 gene from Caenorhabditis elegans 7.7e-22
I3L7M6
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 1.0e-21
CG8494 protein from Drosophila melanogaster 1.3e-21

The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy10711
        (203 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0038862 - symbol:Ubpy "UBPY ortholog" species:7227...   409  3.4e-37   1
UNIPROTKB|E1BF70 - symbol:USP8 "Ubiquitin carboxyl-termin...   370  4.6e-34   1
RGD|1304979 - symbol:Usp8 "ubiquitin specific peptidase 8...   350  6.0e-32   1
UNIPROTKB|H7C189 - symbol:USP4 "Ubiquitin carboxyl-termin...   350  2.6e-31   1
UNIPROTKB|E9PCQ3 - symbol:USP15 "Ubiquitin carboxyl-termi...   320  4.2e-29   2
UNIPROTKB|I3LRX7 - symbol:I3LRX7 "Uncharacterized protein...   320  1.5e-28   1
RGD|628795 - symbol:Usp15 "ubiquitin specific peptidase 1...   323  6.7e-28   1
MGI|MGI:101857 - symbol:Usp15 "ubiquitin specific peptida...   323  7.1e-28   1
UNIPROTKB|F1NE88 - symbol:USP4 "Ubiquitin carboxyl-termin...   322  8.8e-28   1
UNIPROTKB|F1NE89 - symbol:USP4 "Ubiquitin carboxyl-termin...   322  8.8e-28   1
ZFIN|ZDB-GENE-041008-187 - symbol:usp4 "ubiquitin specifi...   321  1.2e-27   1
UNIPROTKB|E1C719 - symbol:USP15 "Ubiquitin carboxyl-termi...   320  1.4e-27   1
UNIPROTKB|J9PBI4 - symbol:USP15 "Ubiquitin carboxyl-termi...   320  1.4e-27   1
UNIPROTKB|F1NFR2 - symbol:USP15 "Ubiquitin carboxyl-termi...   320  1.4e-27   1
UNIPROTKB|E1C718 - symbol:USP15 "Ubiquitin carboxyl-termi...   320  1.5e-27   1
UNIPROTKB|Q9Y4E8 - symbol:USP15 "Ubiquitin carboxyl-termi...   320  1.5e-27   1
UNIPROTKB|E2R988 - symbol:USP15 "Ubiquitin carboxyl-termi...   320  1.5e-27   1
UNIPROTKB|F1SKD5 - symbol:LOC100737425 "Ubiquitin carboxy...   320  1.5e-27   1
UNIPROTKB|F6Z5C0 - symbol:usp15 "Ubiquitin carboxyl-termi...   319  1.9e-27   1
UNIPROTKB|Q2HJE4 - symbol:USP15 "Ubiquitin carboxyl-termi...   318  2.3e-27   1
MGI|MGI:98905 - symbol:Usp4 "ubiquitin specific peptidase...   318  2.4e-27   1
UNIPROTKB|A6QR55 - symbol:USP4 "Ubiquitin carboxyl-termin...   318  2.4e-27   1
RGD|1587387 - symbol:Usp4 "ubiquitin specific peptidase 4...   317  3.0e-27   1
UNIPROTKB|Q13107 - symbol:USP4 "Ubiquitin carboxyl-termin...   317  3.0e-27   1
UNIPROTKB|F1SPT0 - symbol:USP4 "Ubiquitin carboxyl-termin...   317  3.0e-27   1
UNIPROTKB|Q5RCD3 - symbol:USP4 "Ubiquitin carboxyl-termin...   317  3.0e-27   1
UNIPROTKB|E2R6J5 - symbol:USP4 "Ubiquitin carboxyl-termin...   314  6.3e-27   1
MGI|MGI:1934029 - symbol:Usp8 "ubiquitin specific peptida...   314  7.7e-27   1
UNIPROTKB|Q0IIM6 - symbol:USP8 "Ubiquitin carboxyl-termin...   314  7.8e-27   1
UNIPROTKB|E1C0G5 - symbol:E1C0G5 "Ubiquitin carboxyl-term...   311  1.6e-26   1
UNIPROTKB|B4DKA8 - symbol:USP8 "Ubiquitin carboxyl-termin...   309  2.4e-26   1
UNIPROTKB|E2RH35 - symbol:USP8 "Ubiquitin carboxyl-termin...   309  2.8e-26   1
UNIPROTKB|P40818 - symbol:USP8 "Ubiquitin carboxyl-termin...   309  2.8e-26   1
UNIPROTKB|F1RYL9 - symbol:USP8 "Ubiquitin carboxyl-termin...   308  3.4e-26   1
ZFIN|ZDB-GENE-081104-421 - symbol:usp11 "ubiquitin specif...   305  6.1e-26   1
UNIPROTKB|E1BF60 - symbol:USP50 "Ubiquitin carboxyl-termi...   289  1.8e-25   1
MGI|MGI:1922333 - symbol:Usp50 "ubiquitin specific peptid...   289  1.8e-25   1
UNIPROTKB|A1L506 - symbol:USP11 "Ubiquitin carboxyl-termi...   296  3.4e-25   1
RGD|1588822 - symbol:Usp21 "ubiquitin specific peptidase ...   198  3.4e-25   2
MGI|MGI:1353665 - symbol:Usp21 "ubiquitin specific peptid...   198  3.4e-25   2
UNIPROTKB|O57429 - symbol:USP2 "Ubiquitin carboxyl-termin...   286  3.6e-25   1
UNIPROTKB|F1RYM1 - symbol:USP50 "Ubiquitin carboxyl-termi...   286  3.6e-25   1
UNIPROTKB|F1LYZ4 - symbol:F1LYZ4 "Uncharacterized protein...   285  4.6e-25   1
UNIPROTKB|A5PKF9 - symbol:USP11 "Ubiquitin carboxyl-termi...   296  4.8e-25   1
UNIPROTKB|F1MH36 - symbol:USP21 "Ubiquitin carboxyl-termi...   198  5.5e-25   2
UNIPROTKB|E2RGE7 - symbol:USP21 "Ubiquitin carboxyl-termi...   198  5.5e-25   2
UNIPROTKB|Q9UK80 - symbol:USP21 "Ubiquitin carboxyl-termi...   198  5.5e-25   2
UNIPROTKB|F1S196 - symbol:USP21 "Ubiquitin carboxyl-termi...   198  5.5e-25   2
UNIPROTKB|K7GLG2 - symbol:USP11 "Ubiquitin carboxyl-termi...   294  5.5e-25   1
UNIPROTKB|J9PB02 - symbol:USP11 "Ubiquitin carboxyl-termi...   294  5.5e-25   1
UNIPROTKB|J9P3M3 - symbol:USP11 "Ubiquitin carboxyl-termi...   294  5.8e-25   1
UNIPROTKB|F1PQR0 - symbol:USP50 "Uncharacterized protein"...   284  5.9e-25   1
UNIPROTKB|Q2KJ72 - symbol:USP21 "Ubiquitin carboxyl-termi...   197  7.0e-25   2
UNIPROTKB|F1RWV6 - symbol:USP11 "Ubiquitin carboxyl-termi...   294  8.1e-25   1
MGI|MGI:2384312 - symbol:Usp11 "ubiquitin specific peptid...   294  8.1e-25   1
UNIPROTKB|Q5D006 - symbol:Usp11 "Ubiquitin carboxyl-termi...   294  8.1e-25   1
ZFIN|ZDB-GENE-041212-59 - symbol:usp2a "ubiquitin specifi...   290  8.5e-25   1
UNIPROTKB|F1PWM6 - symbol:USP11 "Ubiquitin carboxyl-termi...   294  8.6e-25   1
DICTYBASE|DDB_G0293770 - symbol:DDB_G0293770 "putative ub...   294  1.1e-24   1
UNIPROTKB|F1SAF6 - symbol:USP2 "Ubiquitin carboxyl-termin...   277  3.3e-24   1
SGD|S000003733 - symbol:UBP12 "Ubiquitin-specific proteas...   190  4.7e-24   2
UNIPROTKB|E9PPM2 - symbol:USP2 "Ubiquitin carboxyl-termin...   274  6.8e-24   1
UNIPROTKB|F1NES4 - symbol:LOC100858727 "Uncharacterized p...   279  1.4e-23   1
ASPGD|ASPL0000007671 - symbol:AN6354 species:162425 "Emer...   180  1.7e-23   2
UNIPROTKB|Q2KHV7 - symbol:USP2 "Ubiquitin carboxyl-termin...   278  1.8e-23   1
WB|WBGene00000874 - symbol:cyk-3 species:6239 "Caenorhabd...   158  1.9e-23   2
UNIPROTKB|E2RSX3 - symbol:USP2 "Ubiquitin carboxyl-termin...   277  2.3e-23   1
UNIPROTKB|I3LI16 - symbol:USP2 "Ubiquitin carboxyl-termin...   277  2.3e-23   1
MGI|MGI:1858178 - symbol:Usp2 "ubiquitin specific peptida...   277  2.3e-23   1
TAIR|locus:2139222 - symbol:UBP10 "AT4G10590" species:370...   279  3.2e-23   1
ZFIN|ZDB-GENE-030131-1949 - symbol:usp8 "ubiquitin specif...   280  3.4e-23   1
RGD|621073 - symbol:Usp2 "ubiquitin specific peptidase 2"...   275  3.9e-23   1
UNIPROTKB|Q5U349 - symbol:Usp2 "Ubiquitin carboxyl-termin...   275  3.9e-23   1
UNIPROTKB|O75604 - symbol:USP2 "Ubiquitin carboxyl-termin...   274  4.8e-23   1
TAIR|locus:2139202 - symbol:UBP9 "AT4G10570" species:3702...   277  5.4e-23   1
CGD|CAL0003741 - symbol:DOA4 species:5476 "Candida albica...   190  1.1e-22   2
UNIPROTKB|Q59ZY4 - symbol:DOA4 "Ubiquitin carboxyl-termin...   190  1.1e-22   2
UNIPROTKB|E7ESU0 - symbol:USP19 "Ubiquitin carboxyl-termi...   275  1.1e-22   1
RGD|1303276 - symbol:Usp19 "ubiquitin specific peptidase ...   276  1.2e-22   1
MGI|MGI:1918722 - symbol:Usp19 "ubiquitin specific peptid...   276  1.2e-22   1
UNIPROTKB|O94966 - symbol:USP19 "Ubiquitin carboxyl-termi...   275  1.5e-22   1
UNIPROTKB|E7EST9 - symbol:USP19 "Ubiquitin carboxyl-termi...   275  1.5e-22   1
UNIPROTKB|B5MEG5 - symbol:USP19 "Ubiquitin carboxyl-termi...   275  1.6e-22   1
UNIPROTKB|E7EN22 - symbol:USP19 "Ubiquitin carboxyl-termi...   275  1.6e-22   1
UNIPROTKB|F1SKI2 - symbol:USP19 "Ubiquitin carboxyl-termi...   275  1.7e-22   1
UNIPROTKB|F1MUD4 - symbol:USP19 "Ubiquitin carboxyl-termi...   275  1.7e-22   1
UNIPROTKB|Q28CN3 - symbol:usp33 "Ubiquitin carboxyl-termi...   198  1.8e-22   2
ZFIN|ZDB-GENE-040426-2323 - symbol:usp33 "ubiquitin speci...   195  2.4e-22   2
UNIPROTKB|E2R1W4 - symbol:USP19 "Ubiquitin carboxyl-termi...   273  2.5e-22   1
UNIPROTKB|J9NU38 - symbol:USP19 "Ubiquitin carboxyl-termi...   273  2.5e-22   1
UNIPROTKB|F1PF24 - symbol:USP19 "Ubiquitin carboxyl-termi...   273  2.8e-22   1
FB|FBgn0036913 - symbol:CG8334 species:7227 "Drosophila m...   272  4.5e-22   1
UNIPROTKB|F1NPW7 - symbol:USP49 "Ubiquitin carboxyl-termi...   164  5.9e-22   2
UNIPROTKB|F1P4C5 - symbol:USP44 "Ubiquitin carboxyl-termi...   166  6.1e-22   2
UNIPROTKB|F1LPJ7 - symbol:Usp33 "Ubiquitin carboxyl-termi...   186  6.7e-22   2
UNIPROTKB|F1LRN2 - symbol:Usp33 "Ubiquitin carboxyl-termi...   186  6.9e-22   2
UNIPROTKB|E9PP86 - symbol:USP50 "Inactive ubiquitin carbo...   255  7.0e-22   1
WB|WBGene00019259 - symbol:H34C03.2 species:6239 "Caenorh...   266  7.7e-22   1
UNIPROTKB|I3L7M6 - symbol:USP33 "Ubiquitin carboxyl-termi...   186  1.0e-21   2
FB|FBgn0033916 - symbol:CG8494 species:7227 "Drosophila m...   187  1.3e-21   2

WARNING:  Descriptions of 377 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0038862 [details] [associations]
            symbol:Ubpy "UBPY ortholog" species:7227 "Drosophila
            melanogaster" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0090263 "positive regulation of
            canonical Wnt receptor signaling pathway" evidence=IMP] [GO:0008587
            "imaginal disc-derived wing margin morphogenesis" evidence=IMP]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0045880 "positive
            regulation of smoothened signaling pathway" evidence=IGI]
            [GO:0016579 "protein deubiquitination" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005622
            Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0090263 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0008587 GO:GO:0045880 HSSP:Q93009
            InterPro:IPR015063 Pfam:PF08969 EMBL:AY122247
            ProteinModelPortal:Q8MQX4 SMR:Q8MQX4 MEROPS:C19.A47 PRIDE:Q8MQX4
            UCSC:CG5798-RA FlyBase:FBgn0038862 InParanoid:Q8MQX4
            OrthoDB:EOG470RZ7 ArrayExpress:Q8MQX4 Bgee:Q8MQX4 Uniprot:Q8MQX4
        Length = 896

 Score = 409 (149.0 bits), Expect = 3.4e-37, P = 3.4e-37
 Identities = 93/199 (46%), Positives = 125/199 (62%)

Query:    13 IIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAE 72
             +I   VG GLTGLKNLGNTCY+NSILQCLSNT  L EY +++  ++  +  +KT+G++ E
Sbjct:   553 VIGQNVGRGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIE 612

Query:    73 EFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILID 132
             E   +   LW G  +Y    K     +L    +  VG+ ++ FRG +QQDSHEFLTIL+D
Sbjct:   613 EVAALIKELWNG--QY----KCVASRDL----RYVVGQYQKIFRGVDQQDSHEFLTILMD 662

Query:   133 TLHEDLK-----------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTF 181
              LH DL+            + EK+W EF K  +S+I  LFYGQ+KSTV C  C + S+T+
Sbjct:   663 WLHSDLQTLHVPRQREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATY 722

Query:   182 EVFSNVSLPLPSN-DYCSL 199
             E FSN+SL LP N + C L
Sbjct:   723 ESFSNLSLELPPNSNVCQL 741


>UNIPROTKB|E1BF70 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:DAAA02029069 EMBL:DAAA02029070
            IPI:IPI00825651 Ensembl:ENSBTAT00000015809 ArrayExpress:E1BF70
            Uniprot:E1BF70
        Length = 421

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 88/196 (44%), Positives = 110/196 (56%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEE 73
             +F   GP LTGL+NLGNTCY+NSILQCL NT  L +YF    +       ++T  ++AEE
Sbjct:    86 VFGGSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFN---RNCYQDDINRTCCEVAEE 142

Query:    74 FQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDT 133
             F +I   LW G  RY SP+ FK+           +GK+   F GY QQDS E L  L+D 
Sbjct:   143 FGIIMKALWTGQYRYISPKDFKIT----------IGKINDQFAGYSQQDSQELLLFLMDG 192

Query:   134 LHEDLKESG---EKSWGEFRKK------NKSIISELFYGQLKSTVICCNCQETSSTFEVF 184
             LHEDL +      K    FR+       N+SII  LF GQ KSTV C  C + S TFE F
Sbjct:   193 LHEDLNKVRLYFSKLRRLFRRSCKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAF 252

Query:   185 SNVSLPLPSNDYCSLR 200
               +SLPL S   C+L+
Sbjct:   253 MYLSLPLASTSKCTLQ 268


>RGD|1304979 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10116
            "Rattus norvegicus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
            evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=ISO] [GO:0007265 "Ras
            protein signal transduction" evidence=ISO] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0019897 "extrinsic to
            plasma membrane" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
            [GO:0031313 "extrinsic to endosome membrane" evidence=ISO]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            [GO:0001669 "acrosomal vesicle" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1304979 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00782723 Ensembl:ENSRNOT00000057174
            UCSC:RGD:1304979 ArrayExpress:D4A7S5 Uniprot:D4A7S5
        Length = 416

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 84/190 (44%), Positives = 103/190 (54%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEE 73
             +F   GP LTGL+NLGNTCY+NSILQCL N   L +YF     +           ++AEE
Sbjct:    86 VFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQD--DINRDVFSEVAEE 143

Query:    74 FQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDT 133
             F +I   LW G  RY SP+ FKV           +GK+   F G  QQDS E L  L+D 
Sbjct:   144 FGIIMKALWTGQYRYISPKDFKVT----------IGKINDQFAGSSQQDSQELLLFLMDG 193

Query:   134 LHEDLKES--GEKSWG-EFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
             LHEDL +   G    G +   +  SII  LF GQ KSTV C  C + S TFE F  +SLP
Sbjct:   194 LHEDLNKVRVGHTRTGHQIPLQMVSIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLP 253

Query:   191 LPSNDYCSLR 200
             L S   C+L+
Sbjct:   254 LASTSKCTLQ 263


>UNIPROTKB|H7C189 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC121247 HGNC:HGNC:12627 ChiTaRS:USP4
            ProteinModelPortal:H7C189 Ensembl:ENST00000431357 Uniprot:H7C189
        Length = 621

 Score = 350 (128.3 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 72/178 (40%), Positives = 108/178 (60%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQ 75
             + PGL GL NLGNTC++NS LQCLSNT+PL +YF+  E++  +         G++AE + 
Sbjct:    54 IQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 113

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LH
Sbjct:   114 ELIKQMWSGRDAHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLH 163

Query:   136 EDLKES-GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLP 192
             EDL     +++W   R +N S+I + F+G  KST++C  C + S TF+ F  ++LPLP
Sbjct:   164 EDLNRVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLP 221


>UNIPROTKB|E9PCQ3 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221 EMBL:AC048342
            EMBL:AC079035 EMBL:AC117370 HGNC:HGNC:12613 ChiTaRS:USP15
            IPI:IPI00219505 ProteinModelPortal:E9PCQ3 SMR:E9PCQ3 PRIDE:E9PCQ3
            Ensembl:ENST00000393654 ArrayExpress:E9PCQ3 Bgee:E9PCQ3
            Uniprot:E9PCQ3
        Length = 956

 Score = 320 (117.7 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   261 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 320

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   321 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 370

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   371 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 430

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   431 VTFDPFCYLTLPLPMKKERTLEV 453

 Score = 41 (19.5 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query:     1 MFIITFISYRIKIIFWTVGPGLTGLKNLGNTC 32
             +FI+  I  + +   W  GP    +KN  N C
Sbjct:   209 LFIVLVIEQKNEDGTWPRGPSTPNVKN-SNYC 239


>UNIPROTKB|I3LRX7 [details] [associations]
            symbol:I3LRX7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 Ensembl:ENSSSCT00000030942 OMA:NINNRNP
            Uniprot:I3LRX7
        Length = 489

 Score = 320 (117.7 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   103 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 162

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   163 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 212

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   213 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 272

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   273 VTFDPFCYLTLPLPMKKERTLEV 295


>RGD|628795 [details] [associations]
            symbol:Usp15 "ubiquitin specific peptidase 15" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO;IDA] [GO:0005160 "transforming
            growth factor beta receptor binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007179 "transforming growth
            factor beta receptor signaling pathway" evidence=ISO;ISS]
            [GO:0008152 "metabolic process" evidence=ISO] [GO:0016579 "protein
            deubiquitination" evidence=ISO;IDA] [GO:0030509 "BMP signaling
            pathway" evidence=ISO;ISS] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=ISO;ISS] [GO:0046332 "SMAD binding"
            evidence=ISO] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISO;ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 RGD:628795
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030509 GO:GO:0007179
            GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 HSSP:Q93009
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            MEROPS:C19.022 OrthoDB:EOG4DNF3R EMBL:AF106657 IPI:IPI00205801
            RefSeq:NP_660185.1 UniGene:Rn.161933 ProteinModelPortal:Q9R085
            SMR:Q9R085 STRING:Q9R085 PhosphoSite:Q9R085 PRIDE:Q9R085
            GeneID:171329 KEGG:rno:171329 NextBio:622082 Genevestigator:Q9R085
            Uniprot:Q9R085
        Length = 952

 Score = 323 (118.8 bits), Expect = 6.7e-28, P = 6.7e-28
 Identities = 76/203 (37%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   257 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 316

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   317 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 366

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   367 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 426

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     SL V
Sbjct:   427 VTFDPFCYLTLPLPMKKERSLEV 449


>MGI|MGI:101857 [details] [associations]
            symbol:Usp15 "ubiquitin specific peptidase 15" species:10090
            "Mus musculus" [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=ISO]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IDA] [GO:0005160 "transforming growth factor beta
            receptor binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0007179 "transforming growth factor beta
            receptor signaling pathway" evidence=ISO] [GO:0008152 "metabolic
            process" evidence=IDA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030509 "BMP
            signaling pathway" evidence=ISO] [GO:0035520 "monoubiquitinated
            protein deubiquitination" evidence=ISO] [GO:0046332 "SMAD binding"
            evidence=ISO] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISO] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:101857
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030509 GO:GO:0007179
            GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 EMBL:CH466578
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 MEROPS:C19.022 OMA:RMDPLAK
            OrthoDB:EOG4DNF3R CTD:9958 ChiTaRS:USP15 EMBL:AF468037
            EMBL:AK046332 EMBL:AK083303 EMBL:AK133852 EMBL:AK145749
            EMBL:AK161469 EMBL:AK168755 EMBL:AK122301 EMBL:BC050042
            IPI:IPI00154012 IPI:IPI00222152 IPI:IPI00222154 IPI:IPI00403342
            RefSeq:NP_081880.2 UniGene:Mm.244209 UniGene:Mm.470032
            ProteinModelPortal:Q8R5H1 SMR:Q8R5H1 STRING:Q8R5H1
            PhosphoSite:Q8R5H1 PaxDb:Q8R5H1 PRIDE:Q8R5H1
            Ensembl:ENSMUST00000020334 GeneID:14479 KEGG:mmu:14479
            UCSC:uc007hgn.1 UCSC:uc007hgt.1 UCSC:uc011xpf.1 InParanoid:Q8R5H1
            NextBio:286150 Bgee:Q8R5H1 CleanEx:MM_USP15 Genevestigator:Q8R5H1
            GermOnline:ENSMUSG00000020124 Uniprot:Q8R5H1
        Length = 981

 Score = 323 (118.8 bits), Expect = 7.1e-28, P = 7.1e-28
 Identities = 76/203 (37%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   286 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 345

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   346 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 395

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   396 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 455

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     SL V
Sbjct:   456 VTFDPFCYLTLPLPMKKERSLEV 478


>UNIPROTKB|F1NE88 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02056463 EMBL:AADN02056462
            IPI:IPI00586703 Ensembl:ENSGALT00000006026 Uniprot:F1NE88
        Length = 963

 Score = 322 (118.4 bits), Expect = 8.8e-28, P = 8.8e-28
 Identities = 76/195 (38%), Positives = 110/195 (56%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKT---SGKLAEEFQL 76
             PGL GL NLGNTC++NS LQCLSNT PL +YF+ E K      +S      G++AE +  
Sbjct:   323 PGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFL-EDKYEAEINHSNPLGMRGEIAEAYAE 381

Query:    77 IFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
             +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LHE
Sbjct:   382 LIKQIWSGRQSHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLHE 431

Query:   137 DL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQET 177
             DL           K++         +++W   R +N SII ++F+G  KST++C  C + 
Sbjct:   432 DLNRVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKV 491

Query:   178 SSTFEVFSNVSLPLP 192
             S TF+ F  ++LPLP
Sbjct:   492 SVTFDPFCYLTLPLP 506


>UNIPROTKB|F1NE89 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:CERISRY EMBL:AADN02056463
            EMBL:AADN02056462 IPI:IPI00596700 Ensembl:ENSGALT00000006024
            Uniprot:F1NE89
        Length = 966

 Score = 322 (118.4 bits), Expect = 8.8e-28, P = 8.8e-28
 Identities = 76/195 (38%), Positives = 110/195 (56%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKT---SGKLAEEFQL 76
             PGL GL NLGNTC++NS LQCLSNT PL +YF+ E K      +S      G++AE +  
Sbjct:   326 PGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFL-EDKYEAEINHSNPLGMRGEIAEAYAE 384

Query:    77 IFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
             +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LHE
Sbjct:   385 LIKQIWSGRQSHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLHE 434

Query:   137 DL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQET 177
             DL           K++         +++W   R +N SII ++F+G  KST++C  C + 
Sbjct:   435 DLNRVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKV 494

Query:   178 SSTFEVFSNVSLPLP 192
             S TF+ F  ++LPLP
Sbjct:   495 SVTFDPFCYLTLPLP 509


>ZFIN|ZDB-GENE-041008-187 [details] [associations]
            symbol:usp4 "ubiquitin specific protease 4
            (proto-oncogene)" species:7955 "Danio rerio" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-041008-187 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            KO:K11835 GeneTree:ENSGT00670000097750 CTD:7375 EMBL:BX957236
            IPI:IPI00492306 RefSeq:XP_002662556.2 UniGene:Dr.125623
            UniGene:Dr.161797 UniGene:Dr.37682 Ensembl:ENSDART00000039868
            GeneID:449927 KEGG:dre:449927 NextBio:20832950 Uniprot:E7EZD6
        Length = 1009

 Score = 321 (118.1 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 75/194 (38%), Positives = 106/194 (54%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS LQCLSNT PL EYF+ + ++  +         G++AE +  +
Sbjct:   316 PGLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADL 375

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W   S Y +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LHED
Sbjct:   376 VKQMWLSRSSYVAPRTFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLHED 425

Query:   138 LKESGEK-------------------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L    +K                   +W   R +N SII ++F+G  KST++C  C + S
Sbjct:   426 LNRVKKKPYLALRDAEGRPDEIVAKEAWANHRLRNDSIIVDIFHGLFKSTLVCPECSKVS 485

Query:   179 STFEVFSNVSLPLP 192
              TF+ F  ++LPLP
Sbjct:   486 VTFDPFCYLTLPLP 499


>UNIPROTKB|E1C719 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00822334 Ensembl:ENSGALT00000015893 Uniprot:E1C719
        Length = 953

 Score = 320 (117.7 bits), Expect = 1.4e-27, P = 1.4e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   257 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 316

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   317 IKQMWSGKYSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 366

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   367 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 426

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   427 VTFDPFCYLTLPLPMKKERTLEV 449


>UNIPROTKB|J9PBI4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AAEX03006985
            Ensembl:ENSCAFT00000048170 Uniprot:J9PBI4
        Length = 953

 Score = 320 (117.7 bits), Expect = 1.4e-27, P = 1.4e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   258 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 317

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   318 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 367

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   368 LNRIRKKPYIQLKDADGRPDKIVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 427

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   428 VTFDPFCYLTLPLPMKKERTLEV 450


>UNIPROTKB|F1NFR2 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00575554 Ensembl:ENSGALT00000030681 Uniprot:F1NFR2
        Length = 955

 Score = 320 (117.7 bits), Expect = 1.4e-27, P = 1.4e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   259 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 318

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   319 IKQMWSGKYSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 368

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   369 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 428

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   429 VTFDPFCYLTLPLPMKKERTLEV 451


>UNIPROTKB|E1C718 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007179 "transforming growth factor beta receptor
            signaling pathway" evidence=IEA] [GO:0030509 "BMP signaling
            pathway" evidence=IEA] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=IEA] [GO:0046332 "SMAD binding"
            evidence=IEA] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AADN02009940
            EMBL:AADN02009941 IPI:IPI00580087 Ensembl:ENSGALT00000015894
            Uniprot:E1C718
        Length = 981

 Score = 320 (117.7 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   285 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 344

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   345 IKQMWSGKYSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 394

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   395 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 454

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   455 VTFDPFCYLTLPLPMKKERTLEV 477


>UNIPROTKB|Q9Y4E8 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0016579
            "protein deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=IDA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=IMP;IDA;TAS] [GO:0030509 "BMP signaling pathway"
            evidence=IDA] [GO:0046332 "SMAD binding" evidence=IPI] [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=IMP]
            [GO:0005160 "transforming growth factor beta receptor binding"
            evidence=IPI] [GO:0030512 "negative regulation of transforming
            growth factor beta receptor signaling pathway" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111102 GO:GO:0006508
            GO:GO:0030509 GO:GO:0007179 GO:GO:0060389 GO:GO:0006511
            GO:GO:0008233 SUPFAM:SSF55205 GO:GO:0004197 GO:GO:0030512
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 eggNOG:COG5560
            HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864 MEROPS:C19.022
            OMA:RMDPLAK OrthoDB:EOG4DNF3R EMBL:AF106069 EMBL:AB011101
            EMBL:AF153604 EMBL:AK023703 EMBL:AK292337 EMBL:AC048342
            EMBL:AC079035 EMBL:AC117370 EMBL:BC020688 EMBL:BC063454
            EMBL:BC125123 EMBL:AF013990 IPI:IPI00000728 IPI:IPI00219504
            IPI:IPI01015293 RefSeq:NP_001239007.1 RefSeq:NP_001239008.1
            RefSeq:NP_006304.1 UniGene:Hs.434951 PDB:1W6V PDB:3LMN PDB:3PPA
            PDB:3PV1 PDB:3T9L PDB:4A3O PDB:4A3P PDBsum:1W6V PDBsum:3LMN
            PDBsum:3PPA PDBsum:3PV1 PDBsum:3T9L PDBsum:4A3O PDBsum:4A3P
            ProteinModelPortal:Q9Y4E8 SMR:Q9Y4E8 IntAct:Q9Y4E8 STRING:Q9Y4E8
            PhosphoSite:Q9Y4E8 DMDM:28381406 PaxDb:Q9Y4E8 PRIDE:Q9Y4E8
            DNASU:9958 Ensembl:ENST00000280377 Ensembl:ENST00000312635
            Ensembl:ENST00000353364 GeneID:9958 KEGG:hsa:9958 UCSC:uc001srb.2
            UCSC:uc001src.2 CTD:9958 GeneCards:GC12P062706 H-InvDB:HIX0010773
            HGNC:HGNC:12613 HPA:HPA006237 MIM:604731 neXtProt:NX_Q9Y4E8
            PharmGKB:PA37239 InParanoid:Q9Y4E8 PhylomeDB:Q9Y4E8 ChiTaRS:USP15
            EvolutionaryTrace:Q9Y4E8 GenomeRNAi:9958 NextBio:37576
            ArrayExpress:Q9Y4E8 Bgee:Q9Y4E8 CleanEx:HS_USP15
            Genevestigator:Q9Y4E8 GermOnline:ENSG00000135655 Uniprot:Q9Y4E8
        Length = 981

 Score = 320 (117.7 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   286 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 345

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   346 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 395

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   396 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 455

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   456 VTFDPFCYLTLPLPMKKERTLEV 478


>UNIPROTKB|E2R988 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=IEA]
            [GO:0046332 "SMAD binding" evidence=IEA] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=IEA]
            [GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005160 "transforming growth factor
            beta receptor binding" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00670000097750 OMA:RMDPLAK
            EMBL:AAEX03006985 Ensembl:ENSCAFT00000000496 Uniprot:E2R988
        Length = 982

 Score = 320 (117.7 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   287 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 346

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   347 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 396

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   397 LNRIRKKPYIQLKDADGRPDKIVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 456

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   457 VTFDPFCYLTLPLPMKKERTLEV 479


>UNIPROTKB|F1SKD5 [details] [associations]
            symbol:LOC100737425 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AEMK01054830
            EMBL:AEMK01054840 EMBL:CU570842 EMBL:CU856603 EMBL:CU928889
            Ensembl:ENSSSCT00000000493 Uniprot:F1SKD5
        Length = 982

 Score = 320 (117.7 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   287 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 346

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   347 IKQMWSGKFSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 396

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   397 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 456

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   457 VTFDPFCYLTLPLPMKKERTLEV 479


>UNIPROTKB|F6Z5C0 [details] [associations]
            symbol:usp15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 KO:K11835 MEROPS:C19.022
            EMBL:AAMC01103598 EMBL:AAMC01103599 EMBL:AAMC01103600
            EMBL:AAMC01103601 EMBL:BC166318 RefSeq:NP_001121498.1
            GeneID:100158604 KEGG:xtr:100158604 Xenbase:XB-GENE-1008519
            Uniprot:F6Z5C0
        Length = 982

 Score = 319 (117.4 bits), Expect = 1.9e-27, P = 1.9e-27
 Identities = 75/203 (36%), Positives = 112/203 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS +QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   285 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAEL 344

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   345 IKQMWSGKYSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 394

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   395 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPECSKIS 454

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   455 VTFDPFCYLTLPLPMKKERALEV 477


>UNIPROTKB|Q2HJE4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=ISS] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR013792 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205
            GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 EMBL:DAAA02013374 EMBL:DAAA02013375
            EMBL:DAAA02013376 EMBL:DAAA02013377 EMBL:DAAA02013378 EMBL:BC105521
            IPI:IPI00697254 RefSeq:NP_001039895.1 RefSeq:XP_003586138.1
            UniGene:Bt.29017 ProteinModelPortal:Q2HJE4 SMR:Q2HJE4
            MEROPS:C19.022 PRIDE:Q2HJE4 Ensembl:ENSBTAT00000037574
            GeneID:538284 KEGG:bta:538284 InParanoid:Q2HJE4 OMA:RMDPLAK
            OrthoDB:EOG4DNF3R NextBio:20877322 Uniprot:Q2HJE4
        Length = 952

 Score = 318 (117.0 bits), Expect = 2.3e-27, P = 2.3e-27
 Identities = 75/203 (36%), Positives = 111/203 (54%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PGL GL NLGNTC++NS  QCLSNT PL EYF+ + ++  +         G++A+ +  +
Sbjct:   257 PGLCGLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 316

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W+G   Y +P+ FK +   VG+F  +       F GY+QQD  E L  L+D LHED
Sbjct:   317 IKQMWSGKYSYVTPRAFKTQ---VGRFAPQ-------FSGYQQQDCQELLAFLLDGLHED 366

Query:   138 L-----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L           K++         E++W    K+N SII ++F+G  KST++C  C + S
Sbjct:   367 LNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKIS 426

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  ++LPLP     +L V
Sbjct:   427 VTFDPFCYLTLPLPMKKERTLEV 449


>MGI|MGI:98905 [details] [associations]
            symbol:Usp4 "ubiquitin specific peptidase 4 (proto-oncogene)"
            species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISO] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=ISO] [GO:0031647 "regulation of protein
            stability" evidence=ISO] [GO:0031685 "adenosine receptor binding"
            evidence=ISO] [GO:0034394 "protein localization to cell surface"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:98905
            Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053 EMBL:CH466560
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            HOVERGEN:HBG000864 GeneTree:ENSGT00670000097750 CTD:7375
            OMA:CERISRY OrthoDB:EOG4C5CHR MEROPS:C19.010 EMBL:L00681
            EMBL:AF026469 EMBL:AK089425 EMBL:AK143582 EMBL:AK149964
            EMBL:AK169933 EMBL:AK171271 IPI:IPI00115701 PIR:I58376
            RefSeq:NP_035808.2 UniGene:Mm.3974 PDB:3JYU PDBsum:3JYU
            ProteinModelPortal:P35123 SMR:P35123 STRING:P35123
            PhosphoSite:P35123 PaxDb:P35123 PRIDE:P35123
            Ensembl:ENSMUST00000035237 GeneID:22258 KEGG:mmu:22258
            InParanoid:Q8BTL9 EvolutionaryTrace:P35123 NextBio:302345
            Bgee:P35123 CleanEx:MM_USP4 Genevestigator:P35123
            GermOnline:ENSMUSG00000032612 Uniprot:P35123
        Length = 962

 Score = 318 (117.0 bits), Expect = 2.4e-27, P = 2.4e-27
 Identities = 73/196 (37%), Positives = 111/196 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQ 75
             + PGL GL NLGNTC++NS LQCLSNT+PL EYF+  E++  +         G++AE + 
Sbjct:   297 IQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYA 356

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  ++D LH
Sbjct:   357 ELIKQMWSGRDTHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFILDGLH 406

Query:   136 EDL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL           K++         +++W   R +N S+I + F+G  KST++C  C +
Sbjct:   407 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  ++LPLP
Sbjct:   467 VSVTFDPFCYLTLPLP 482


>UNIPROTKB|A6QR55 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0034394 "protein
            localization to cell surface" evidence=ISS] [GO:0031647 "regulation
            of protein stability" evidence=ISS] [GO:0031397 "negative
            regulation of protein ubiquitination" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] [GO:0031685 "adenosine
            receptor binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 EMBL:BC150120 IPI:IPI00697204
            RefSeq:NP_001093789.1 UniGene:Bt.52457 ProteinModelPortal:A6QR55
            SMR:A6QR55 PRIDE:A6QR55 Ensembl:ENSBTAT00000015787 GeneID:508042
            KEGG:bta:508042 CTD:7375 InParanoid:A6QR55 OMA:CERISRY
            OrthoDB:EOG4C5CHR NextBio:20868329 Uniprot:A6QR55
        Length = 963

 Score = 318 (117.0 bits), Expect = 2.4e-27, P = 2.4e-27
 Identities = 74/196 (37%), Positives = 111/196 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQ 75
             V PGL GL NLGNTC++NS LQCLSNT+PL +YF+  E++  +         G++AE + 
Sbjct:   297 VQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 356

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LH
Sbjct:   357 ELIKQMWSGRDAHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLH 406

Query:   136 EDL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL           K++         +++W   R +N S+I + F+G  KST++C  C +
Sbjct:   407 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  ++LPLP
Sbjct:   467 VSVTFDPFCYLTLPLP 482


>RGD|1587387 [details] [associations]
            symbol:Usp4 "ubiquitin specific peptidase 4 (proto-oncogene)"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISO;ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;ISS]
            [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
            evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=ISO;ISS] [GO:0031397 "negative
            regulation of protein ubiquitination" evidence=ISO;ISS] [GO:0031647
            "regulation of protein stability" evidence=ISO;ISS] [GO:0031685
            "adenosine receptor binding" evidence=IEA;ISO] [GO:0034394 "protein
            localization to cell surface" evidence=ISO;ISS] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            RGD:1587387 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0031647 EMBL:CH473954 GO:GO:0006511
            PROSITE:PS50053 GO:GO:0034394 GO:GO:0031397 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 KO:K11835 HOVERGEN:HBG000864 CTD:7375
            EMBL:BC166460 IPI:IPI00914176 RefSeq:NP_001128484.1
            UniGene:Rn.92126 ProteinModelPortal:B2GUZ1 SMR:B2GUZ1
            PhosphoSite:B2GUZ1 PRIDE:B2GUZ1 GeneID:290864 KEGG:rno:290864
            NextBio:631779 Genevestigator:B2GUZ1 Uniprot:B2GUZ1
        Length = 961

 Score = 317 (116.6 bits), Expect = 3.0e-27, P = 3.0e-27
 Identities = 73/196 (37%), Positives = 110/196 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQ 75
             + PGL GL NLGNTC++NS LQCLSNT PL EYF+  E++  +         G++AE + 
Sbjct:   297 IQPGLCGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYA 356

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  ++D LH
Sbjct:   357 ELIKQMWSGRDTHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFILDGLH 406

Query:   136 EDL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL           K++         +++W   R +N S+I + F+G  KST++C  C +
Sbjct:   407 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  ++LPLP
Sbjct:   467 VSVTFDPFCYLTLPLP 482


>UNIPROTKB|Q13107 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IMP] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031685
            "adenosine receptor binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0034394 "protein localization to cell surface"
            evidence=IDA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=IMP] [GO:0031647 "regulation of protein
            stability" evidence=IDA] [GO:0005764 "lysosome" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0046872
            GO:GO:0005764 GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 EMBL:AC121247 eggNOG:COG5560 HOGENOM:HOG000264375
            KO:K11835 HOVERGEN:HBG000864 CTD:7375 OMA:CERISRY EMBL:U20657
            EMBL:AF017305 EMBL:AF017306 EMBL:AK291795 EMBL:BC068017
            EMBL:BC125130 IPI:IPI00011836 IPI:IPI00216257 IPI:IPI00927927
            PIR:T09478 RefSeq:NP_001238806.1 RefSeq:NP_003354.2
            RefSeq:NP_955475.1 UniGene:Hs.403828 UniGene:Hs.77500 PDB:2Y6E
            PDBsum:2Y6E ProteinModelPortal:Q13107 SMR:Q13107 IntAct:Q13107
            STRING:Q13107 MEROPS:C19.010 PhosphoSite:Q13107 DMDM:116242839
            PaxDb:Q13107 PRIDE:Q13107 Ensembl:ENST00000265560
            Ensembl:ENST00000351842 Ensembl:ENST00000416417 GeneID:7375
            KEGG:hsa:7375 UCSC:uc003cwp.2 UCSC:uc003cwr.2 GeneCards:GC03M049290
            HGNC:HGNC:12627 HPA:HPA018499 MIM:603486 neXtProt:NX_Q13107
            PharmGKB:PA37252 InParanoid:Q13107 PhylomeDB:Q13107 ChiTaRS:USP4
            EvolutionaryTrace:Q13107 GenomeRNAi:7375 NextBio:28880
            ArrayExpress:Q13107 Bgee:Q13107 CleanEx:HS_USP4
            Genevestigator:Q13107 GermOnline:ENSG00000114316 Uniprot:Q13107
        Length = 963

 Score = 317 (116.6 bits), Expect = 3.0e-27, P = 3.0e-27
 Identities = 73/196 (37%), Positives = 111/196 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQ 75
             + PGL GL NLGNTC++NS LQCLSNT+PL +YF+  E++  +         G++AE + 
Sbjct:   297 IQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 356

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LH
Sbjct:   357 ELIKQMWSGRDAHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLH 406

Query:   136 EDL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL           K++         +++W   R +N S+I + F+G  KST++C  C +
Sbjct:   407 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  ++LPLP
Sbjct:   467 VSVTFDPFCYLTLPLP 482


>UNIPROTKB|F1SPT0 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0034394 "protein localization to cell
            surface" evidence=IEA] [GO:0031685 "adenosine receptor binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11835
            GeneTree:ENSGT00670000097750 OMA:CERISRY EMBL:FP326740
            RefSeq:NP_001230117.1 UniGene:Ssc.23825 UniGene:Ssc.2787
            Ensembl:ENSSSCT00000012460 GeneID:100512072 KEGG:ssc:100512072
            Uniprot:F1SPT0
        Length = 963

 Score = 317 (116.6 bits), Expect = 3.0e-27, P = 3.0e-27
 Identities = 74/196 (37%), Positives = 111/196 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQ 75
             V PGL GL NLGNTC++NS LQCLSNT+PL +YF+  E++  +         G++AE + 
Sbjct:   297 VQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 356

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LH
Sbjct:   357 ELIKQMWSGRDAHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLH 406

Query:   136 EDL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL           K++         +++W   R +N S+I + F+G  KST++C  C +
Sbjct:   407 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  ++LPLP
Sbjct:   467 ISVTFDPFCYLTLPLP 482


>UNIPROTKB|Q5RCD3 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=ISS] [GO:0031647 "regulation of
            protein stability" evidence=ISS] [GO:0034394 "protein localization
            to cell surface" evidence=ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 KO:K11835 HOVERGEN:HBG000864 CTD:7375 EMBL:CR858339
            RefSeq:NP_001125307.1 UniGene:Pab.8716 HSSP:Q9Y4E8
            ProteinModelPortal:Q5RCD3 SMR:Q5RCD3 PRIDE:Q5RCD3 GeneID:100172206
            KEGG:pon:100172206 InParanoid:Q5RCD3 Uniprot:Q5RCD3
        Length = 963

 Score = 317 (116.6 bits), Expect = 3.0e-27, P = 3.0e-27
 Identities = 73/196 (37%), Positives = 111/196 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQ 75
             + PGL GL NLGNTC++NS LQCLSNT+PL +YF+  E++  +         G++AE + 
Sbjct:   297 IQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 356

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LH
Sbjct:   357 ELIKQMWSGRDAHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLH 406

Query:   136 EDL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL           K++         +++W   R +N S+I + F+G  KST++C  C +
Sbjct:   407 EDLNRVKKKPYLELKDANGRPDVVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  ++LPLP
Sbjct:   467 VSVTFDPFCYLTLPLP 482


>UNIPROTKB|E2R6J5 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0034394 "protein
            localization to cell surface" evidence=IEA] [GO:0031685 "adenosine
            receptor binding" evidence=IEA] [GO:0031647 "regulation of protein
            stability" evidence=IEA] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11835
            GeneTree:ENSGT00670000097750 CTD:7375 OMA:CERISRY EMBL:AAEX03012231
            RefSeq:XP_533829.3 Ensembl:ENSCAFT00000018443 GeneID:476624
            KEGG:cfa:476624 NextBio:20852247 Uniprot:E2R6J5
        Length = 964

 Score = 314 (115.6 bits), Expect = 6.3e-27, P = 6.3e-27
 Identities = 72/196 (36%), Positives = 111/196 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQ 75
             + PGL GL NLGNTC++NS LQCLSNT+PL +YF+ + ++  +         G++AE + 
Sbjct:   297 IQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYA 356

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   +W+G   + +P+ FK +   VG+F  +       F GY+QQDS E L  L+D LH
Sbjct:   357 ELIKQMWSGRDTHVAPRMFKTQ---VGRFAPQ-------FSGYQQQDSQELLAFLLDGLH 406

Query:   136 EDL-----------KESG--------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL           K++         +++W   R +N S+I + F+G  KST++C  C +
Sbjct:   407 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  ++LPLP
Sbjct:   467 VSVTFDPFCYLTLPLP 482


>MGI|MGI:1934029 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10090
            "Mus musculus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0001669 "acrosomal vesicle" evidence=IDA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
            "endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
            [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0005886 "plasma
            membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0007032 "endosome organization" evidence=ISO;IMP]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007265 "Ras protein
            signal transduction" evidence=IPI] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO;IDA;IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
            evidence=ISO] [GO:0030496 "midbody" evidence=ISO;IDA] [GO:0031313
            "extrinsic to endosome membrane" evidence=IDA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 MGI:MGI:1934029 GO:GO:0005829
            GO:GO:0005886 GO:GO:0005634 GO:GO:0007265 GO:GO:0007049
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0030496 GO:GO:0007032
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 KO:K11839
            GO:GO:0031313 EMBL:AL732330 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969 EMBL:AB045709
            EMBL:AF057146 EMBL:AK122195 EMBL:BC027052 EMBL:BC050947
            EMBL:BC061465 EMBL:BC066126 IPI:IPI00171977 RefSeq:NP_062703.2
            UniGene:Mm.272629 UniGene:Mm.490069 ProteinModelPortal:Q80U87
            SMR:Q80U87 IntAct:Q80U87 MINT:MINT-144852 STRING:Q80U87
            PhosphoSite:Q80U87 PaxDb:Q80U87 PRIDE:Q80U87
            Ensembl:ENSMUST00000028841 GeneID:84092 KEGG:mmu:84092
            UCSC:uc008meb.1 NextBio:350878 Bgee:Q80U87 CleanEx:MM_USP8
            Genevestigator:Q80U87 GermOnline:ENSMUSG00000027363 Uniprot:Q80U87
        Length = 1080

 Score = 314 (115.6 bits), Expect = 7.7e-27, P = 7.7e-27
 Identities = 79/204 (38%), Positives = 108/204 (52%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF-----VTEFKRSMTAAYSKTSG 68
             +F   GP LTGL+NLGNTCY+NSILQCL N   L +YF       +  RS    +    G
Sbjct:   730 VFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHK---G 786

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFRG---YEQQDSH 124
             ++AEEF +I   LW G  RY SP+ FKV    +GK  ++  G  ++  +    +     H
Sbjct:   787 EVAEEFGIIMKALWTGQYRYISPKDFKVT---IGKINDQFAGSSQQDSQELLLFLMDGLH 843

Query:   125 EFLTILIDTL--------HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             E L    +          H D  ++ E +W + ++ N+SII  LF GQ KSTV C  C+ 
Sbjct:   844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCRR 903

Query:   177 TSSTFEVFSNVSLPLPSNDYCSLR 200
              S TFE F  +SLPL S   C+L+
Sbjct:   904 RSRTFEAFMYLSLPLASTSKCTLQ 927


>UNIPROTKB|Q0IIM6 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            eggNOG:COG5533 KO:K11839 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OMA:KINDQFA OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969
            EMBL:DAAA02029069 EMBL:DAAA02029070 EMBL:BC122571 IPI:IPI00697060
            RefSeq:NP_001069594.1 UniGene:Bt.9664 SMR:Q0IIM6 STRING:Q0IIM6
            Ensembl:ENSBTAT00000033814 GeneID:538743 KEGG:bta:538743
            InParanoid:Q0IIM6 NextBio:20877551 Uniprot:Q0IIM6
        Length = 1085

 Score = 314 (115.6 bits), Expect = 7.8e-27, P = 7.8e-27
 Identities = 79/204 (38%), Positives = 109/204 (53%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF-----VTEFKRSMTAAYSKTSG 68
             +F   GP LTGL+NLGNTCY+NSILQCL NT  L +YF       +  RS    +    G
Sbjct:   735 VFGGSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHK---G 791

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFRG---YEQQDSH 124
             ++AEEF +I   LW G  RY SP+ FK+    +GK  ++  G  ++  +    +     H
Sbjct:   792 EVAEEFGIIMKALWTGQYRYISPKDFKIT---IGKINDQFAGYSQQDSQELLLFLMDGLH 848

Query:   125 EFLTILIDTL--------HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             E L    +          H D  ++ E +W + ++ N+SII  LF GQ KSTV C  C +
Sbjct:   849 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHK 908

Query:   177 TSSTFEVFSNVSLPLPSNDYCSLR 200
              S TFE F  +SLPL S   C+L+
Sbjct:   909 KSRTFEAFMYLSLPLASTSKCTLQ 932


>UNIPROTKB|E1C0G5 [details] [associations]
            symbol:E1C0G5 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0000281 "cytokinesis after
            mitosis" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0007032 "endosome
            organization" evidence=IEA] [GO:0007265 "Ras protein signal
            transduction" evidence=IEA] [GO:0019897 "extrinsic to plasma
            membrane" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:AADN02041582 IPI:IPI00592203
            Ensembl:ENSGALT00000009484 Uniprot:E1C0G5
        Length = 1082

 Score = 311 (114.5 bits), Expect = 1.6e-26, P = 1.6e-26
 Identities = 78/202 (38%), Positives = 111/202 (54%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAA-YSKTSGKLA 71
             +F   GP LTGL+NLGNTCY+NSILQCL N   L EYF    ++  +  + +    G++A
Sbjct:   732 VFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSNFLGHKGEVA 791

Query:    72 EEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFRG---YEQQDSHEFL 127
             EEF +I   LW G  +Y SP+ FK+    +GK  ++  G  ++  +    +     HE L
Sbjct:   792 EEFGVIMKALWTGQYKYISPKDFKIT---IGKINDQFAGYSQQDSQELLLFLMDGLHEDL 848

Query:   128 TILIDTL--------H-EDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
                 +          H +DLK + E +W + ++ N+SII  LF GQ KSTV C  C + S
Sbjct:   849 NKADNRKRYKEENNDHLDDLK-AAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKS 907

Query:   179 STFEVFSNVSLPLPSNDYCSLR 200
              TFE F  +SLPL S   C+L+
Sbjct:   908 RTFEAFMYLSLPLASTSKCTLQ 929


>UNIPROTKB|B4DKA8 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 UniGene:Hs.443731 HGNC:HGNC:12631
            HOGENOM:HOG000231497 HOVERGEN:HBG012631 ChiTaRS:USP8
            InterPro:IPR015063 Pfam:PF08969 EMBL:AC012170 EMBL:AK296480
            IPI:IPI00941811 SMR:B4DKA8 STRING:B4DKA8 Ensembl:ENST00000425032
            UCSC:uc010ufh.2 Uniprot:B4DKA8
        Length = 1012

 Score = 309 (113.8 bits), Expect = 2.4e-26, P = 2.4e-26
 Identities = 78/204 (38%), Positives = 108/204 (52%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF-----VTEFKRSMTAAYSKTSG 68
             +F   GP LTGL+NLGNTCY+NSILQCL N   L +YF       +  RS    +    G
Sbjct:   662 VFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHK---G 718

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFRG---YEQQDSH 124
             ++AEEF +I   LW G  RY SP+ FK+    +GK  ++  G  ++  +    +     H
Sbjct:   719 EVAEEFGIIMKALWTGQYRYISPKDFKIT---IGKINDQFAGYSQQDSQELLLFLMDGLH 775

Query:   125 EFLTILIDTL--------HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             E L    +          H D  ++ E +W + ++ N+SII  LF GQ KSTV C  C +
Sbjct:   776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHK 835

Query:   177 TSSTFEVFSNVSLPLPSNDYCSLR 200
              S TFE F  +SLPL S   C+L+
Sbjct:   836 KSRTFEAFMYLSLPLASTSKCTLQ 859


>UNIPROTKB|E2RH35 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 KO:K11839 GeneTree:ENSGT00670000097591
            CTD:9101 OMA:KINDQFA InterPro:IPR015063 Pfam:PF08969
            EMBL:AAEX03016119 RefSeq:XP_535474.1 Ensembl:ENSCAFT00000024054
            GeneID:478299 KEGG:cfa:478299 Uniprot:E2RH35
        Length = 1116

 Score = 309 (113.8 bits), Expect = 2.8e-26, P = 2.8e-26
 Identities = 78/204 (38%), Positives = 108/204 (52%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF-----VTEFKRSMTAAYSKTSG 68
             +F   GP LTGL+NLGNTCY+NSILQCL N   L +YF       +  RS    +    G
Sbjct:   766 VFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHK---G 822

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFRG---YEQQDSH 124
             ++AEEF +I   LW G  RY SP+ FK+    +GK  ++  G  ++  +    +     H
Sbjct:   823 EVAEEFGIIMKALWTGQYRYISPKDFKIT---IGKINDQFAGYSQQDSQELLLFLMDGLH 879

Query:   125 EFLTILIDTL--------HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             E L    +          H D  ++ E +W + ++ N+SII  LF GQ KSTV C  C +
Sbjct:   880 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHK 939

Query:   177 TSSTFEVFSNVSLPLPSNDYCSLR 200
              S TFE F  +SLPL S   C+L+
Sbjct:   940 KSRTFEAFMYLSLPLASTSKCTLQ 963


>UNIPROTKB|P40818 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase 8"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0007265 "Ras protein signal transduction"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0010008
            "endosome membrane" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IDA] [GO:0005769 "early endosome"
            evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IDA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0019897 "extrinsic to
            plasma membrane" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
            [GO:0000281 "cytokinesis after mitosis" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0016579 "protein deubiquitination"
            evidence=IMP] [GO:0030496 "midbody" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005829
            GO:GO:0005634 Reactome:REACT_111102 GO:GO:0007265 GO:GO:0008283
            GO:GO:0019897 GO:GO:0010008 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000281
            GO:GO:0006511 GO:GO:0030496 GO:GO:0007032 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5533 PDB:2GWF PDBsum:2GWF KO:K11839
            PDB:3N3K PDBsum:3N3K BRENDA:3.1.2.15 EMBL:D29956 EMBL:BX537420
            EMBL:BC038801 EMBL:BC051345 EMBL:BC110590 IPI:IPI00030915
            RefSeq:NP_001122082.1 RefSeq:NP_001122083.1 RefSeq:NP_005145.3
            UniGene:Hs.443731 PDB:1WHB PDB:2A9U PDB:2GFO PDBsum:1WHB
            PDBsum:2A9U PDBsum:2GFO ProteinModelPortal:P40818 SMR:P40818
            DIP:DIP-40365N IntAct:P40818 MINT:MINT-244406 STRING:P40818
            MEROPS:C19.011 PhosphoSite:P40818 DMDM:731046 PaxDb:P40818
            PeptideAtlas:P40818 PRIDE:P40818 Ensembl:ENST00000307179
            Ensembl:ENST00000396444 Ensembl:ENST00000433963 GeneID:9101
            KEGG:hsa:9101 UCSC:uc001zyl.4 CTD:9101 GeneCards:GC15P050716
            H-InvDB:HIX0172812 HGNC:HGNC:12631 HPA:HPA004869 MIM:603158
            neXtProt:NX_P40818 PharmGKB:PA37256 HOGENOM:HOG000231497
            HOVERGEN:HBG012631 InParanoid:P40818 OMA:KINDQFA OrthoDB:EOG4XKV6B
            PhylomeDB:P40818 ChiTaRS:USP8 EvolutionaryTrace:P40818
            GenomeRNAi:9101 NextBio:34117 ArrayExpress:P40818 Bgee:P40818
            CleanEx:HS_USP8 Genevestigator:P40818 GermOnline:ENSG00000138592
            InterPro:IPR015063 Pfam:PF08969 Uniprot:P40818
        Length = 1118

 Score = 309 (113.8 bits), Expect = 2.8e-26, P = 2.8e-26
 Identities = 78/204 (38%), Positives = 108/204 (52%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF-----VTEFKRSMTAAYSKTSG 68
             +F   GP LTGL+NLGNTCY+NSILQCL N   L +YF       +  RS    +    G
Sbjct:   768 VFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHK---G 824

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFRG---YEQQDSH 124
             ++AEEF +I   LW G  RY SP+ FK+    +GK  ++  G  ++  +    +     H
Sbjct:   825 EVAEEFGIIMKALWTGQYRYISPKDFKIT---IGKINDQFAGYSQQDSQELLLFLMDGLH 881

Query:   125 EFLTILIDTL--------HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             E L    +          H D  ++ E +W + ++ N+SII  LF GQ KSTV C  C +
Sbjct:   882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHK 941

Query:   177 TSSTFEVFSNVSLPLPSNDYCSLR 200
              S TFE F  +SLPL S   C+L+
Sbjct:   942 KSRTFEAFMYLSLPLASTSKCTLQ 965


>UNIPROTKB|F1RYL9 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:CU469118 EMBL:CU582768 Ensembl:ENSSSCT00000005124
            Uniprot:F1RYL9
        Length = 1089

 Score = 308 (113.5 bits), Expect = 3.4e-26, P = 3.4e-26
 Identities = 76/201 (37%), Positives = 108/201 (53%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAA-YSKTSGKLA 71
             +F   GP LTGL+NLGNTCY+NSILQCL N   L +YF    ++  +  +      G++A
Sbjct:   739 VFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSNLLGHKGEVA 798

Query:    72 EEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFRG---YEQQDSHEFL 127
             EEF +I   LW G  RY SP+ FK+    +GK  ++  G  ++  +    +     HE L
Sbjct:   799 EEFGIIMKALWTGQYRYISPKDFKIT---IGKINDQFAGYSQQDSQELLLFLMDGLHEDL 855

Query:   128 TILIDTL--------HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSS 179
                 +          H D  ++ E +W + ++ N+SII  LF GQ KSTV C  C + S 
Sbjct:   856 NKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSR 915

Query:   180 TFEVFSNVSLPLPSNDYCSLR 200
             TFE F  +SLPL S   C+L+
Sbjct:   916 TFEAFMYLSLPLASTSKCTLQ 936


>ZFIN|ZDB-GENE-081104-421 [details] [associations]
            symbol:usp11 "ubiquitin specific peptidase 11"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 ZFIN:ZDB-GENE-081104-421 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000097750 EMBL:CR457452
            EMBL:CR847787 IPI:IPI00890594 Ensembl:ENSDART00000075624
            ArrayExpress:F1QPF4 Bgee:F1QPF4 Uniprot:F1QPF4
        Length = 990

 Score = 305 (112.4 bits), Expect = 6.1e-26, P = 6.1e-26
 Identities = 74/196 (37%), Positives = 108/196 (55%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSNT PL EYF+   +   +  +      G++AE +  +
Sbjct:   239 PGVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYADV 298

Query:    78 FNMLWAGDSRYFS--PQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
                +W+G  R++S  P+ FK K   VG F  +       F GY+Q DS E L+ L+D LH
Sbjct:   299 IKQMWSG--RHYSVVPRVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLH 346

Query:   136 EDL-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL                   +E  E++W    ++N S+I + F+G  KST++C  C +
Sbjct:   347 EDLNRVKKKEYIELRDADGRPDQEVAEEAWRNHLRRNDSVIVDTFHGLFKSTLVCPECNK 406

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  +S+PLP
Sbjct:   407 VSVTFDPFCYLSVPLP 422


>UNIPROTKB|E1BF60 [details] [associations]
            symbol:USP50 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:DAAA02029067
            EMBL:DAAA02029068 EMBL:DAAA02029069 IPI:IPI00686382
            Ensembl:ENSBTAT00000015823 Uniprot:E1BF60
        Length = 374

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 71/190 (37%), Positives = 103/190 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             G+TGL+NLGNTCY+N+ILQCL + SPL EYF++        A  K   ++A  F  +   
Sbjct:    47 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSG---KYINALQKDCSEVATAFAYVMTD 103

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W GDS   SP       E+   F+  +G +   F    QQD+ EFL  +++ LHE LK+
Sbjct:   104 MWLGDSDCVSP-------EI---FRSALGNLYPVFMKKTQQDAQEFLIYVLNELHEALKK 153

Query:   141 SGEKSWGEFRK----------KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
               ++   E R              SII+ LF GQL  +++C  C+  +   EVF+ +SLP
Sbjct:   154 YHQRKAYEKRSIPRCCRKMIANESSIITRLFEGQLSYSIVCLKCENCTYKNEVFTIISLP 213

Query:   191 LPSNDYCSLR 200
             +PS   CSL+
Sbjct:   214 IPSEYECSLQ 223


>MGI|MGI:1922333 [details] [associations]
            symbol:Usp50 "ubiquitin specific peptidase 50" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1922333 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000231498
            GeneTree:ENSGT00670000097591 MEROPS:C19.058 HOVERGEN:HBG098592
            EMBL:AK007018 EMBL:AK015766 EMBL:BC061020 IPI:IPI00420445
            IPI:IPI00461643 RefSeq:NP_083439.2 UniGene:Mm.389373
            ProteinModelPortal:Q6P8X6 SMR:Q6P8X6 PhosphoSite:Q6P8X6
            PRIDE:Q6P8X6 Ensembl:ENSMUST00000028842 GeneID:75083 KEGG:mmu:75083
            CTD:373509 InParanoid:Q6P8X6 OMA:HFQGVTG NextBio:342171 Bgee:Q6P8X6
            CleanEx:MM_USP50 Genevestigator:Q6P8X6
            GermOnline:ENSMUSG00000027364 Uniprot:Q6P8X6
        Length = 390

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 75/190 (39%), Positives = 107/190 (56%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             G+TGL+NLGNTCY+N+ILQCL + SPL EYF++   + +TA   K   ++   F  +   
Sbjct:    43 GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSG--KYITAL-KKDCSEVTTAFAYLMTD 99

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W GDS   SP       E+   F   VG +   F    QQD+ EFL  +++ LHE LK+
Sbjct:   100 MWLGDSDCVSP-------EI---FLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKK 149

Query:   141 S-----GEKSWGEF--RK---KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
                    EK  G+   RK   +  SII+ LF GQL  ++ C  C+  +   EVF+ +SLP
Sbjct:   150 HCRRRVNEKRTGQSCCRKVPAQETSIITRLFEGQLSYSITCLKCESCTHKNEVFTILSLP 209

Query:   191 LPSNDYCSLR 200
             +PS+  CSL+
Sbjct:   210 IPSDYECSLQ 219


>UNIPROTKB|A1L506 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            MEROPS:C19.014 HOVERGEN:HBG000864 OrthoDB:EOG4QRH3H CTD:8237
            GeneTree:ENSGT00670000097750 EMBL:DAAA02073014 EMBL:DAAA02073015
            EMBL:BT029793 IPI:IPI00824936 IPI:IPI00905233 RefSeq:NP_001073777.1
            UniGene:Bt.43412 Ensembl:ENSBTAT00000055593 GeneID:538948
            KEGG:bta:538948 InParanoid:A1L506 NextBio:20877682 Uniprot:A1L506
        Length = 756

 Score = 296 (109.3 bits), Expect = 3.4e-25, P = 3.4e-25
 Identities = 72/205 (35%), Positives = 106/205 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++A+ +  +
Sbjct:    99 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADL 158

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   PQ FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   159 VKQAWSGHHRSIVPQVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 208

Query:   138 L-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                   +E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   209 LNRIKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 268

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +S+PLP +    + V F
Sbjct:   269 VTFDPFCYLSVPLPVSHKRVMEVFF 293


>RGD|1588822 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10116
            "Rattus norvegicus" [GO:0003713 "transcription coactivator
            activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=ISO;ISS]
            [GO:0016578 "histone deubiquitination" evidence=ISO;ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=ISO;ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1588822 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0006351
            GO:GO:0003713 GO:GO:0006511 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 CTD:27005
            HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD EMBL:BC166443
            IPI:IPI00896130 RefSeq:NP_001121110.1 UniGene:Rn.136743
            ProteinModelPortal:B2GUX4 PRIDE:B2GUX4 GeneID:688466
            KEGG:rno:688466 UCSC:RGD:1588822 NextBio:736555 ArrayExpress:B2GUX4
            Genevestigator:B2GUX4 Uniprot:B2GUX4
        Length = 565

 Score = 198 (74.8 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
 Identities = 44/130 (33%), Positives = 74/130 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQL 76
             +G G  GL+NLGNTC++N++LQCLS+T PLR++ +  +F++ +       + +L E F  
Sbjct:   207 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG--GRAQELTEAFAD 264

Query:    77 IFNMLWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             +   LW  DS    +P +F+   +          K   +F GY QQD+ EFL +L++ LH
Sbjct:   265 VIGALWHPDSCEAVNPTRFRAVFQ----------KYVPSFSGYSQQDAQEFLKLLMERLH 314

Query:   136 EDLKESGEKS 145
              ++   G ++
Sbjct:   315 LEINRRGRRA 324

 Score = 121 (47.7 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
 Identities = 28/73 (38%), Positives = 42/73 (57%)

Query:   134 LHEDLKESGEKS----WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSL 189
             LHE+ + S +      W  + ++  S I +LF GQLKS + C  C   S+TFEVF ++SL
Sbjct:   343 LHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSL 402

Query:   190 PLPSNDYCSLRVS 202
             P+P   +   +VS
Sbjct:   403 PIPKKGFAGGKVS 415


>MGI|MGI:1353665 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10090
            "Mus musculus" [GO:0003713 "transcription coactivator activity"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO;IDA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISO;IDA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019784
            "NEDD8-specific protease activity" evidence=ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1353665 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0046872 GO:GO:0006351 GO:GO:0003713
            GO:GO:0006511 GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 eggNOG:COG5533 HOGENOM:HOG000231498 MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 EMBL:AF177759 EMBL:AK011148
            EMBL:BC021903 IPI:IPI00830385 RefSeq:NP_038947.2 UniGene:Mm.27510
            ProteinModelPortal:Q9QZL6 SMR:Q9QZL6 STRING:Q9QZL6
            PhosphoSite:Q9QZL6 PRIDE:Q9QZL6 Ensembl:ENSMUST00000111306
            GeneID:30941 KEGG:mmu:30941 UCSC:uc011wwa.1
            GeneTree:ENSGT00670000098024 NextBio:307382 Bgee:Q9QZL6
            CleanEx:MM_USP21 Genevestigator:Q9QZL6
            GermOnline:ENSMUSG00000053483 Uniprot:Q9QZL6
        Length = 566

 Score = 198 (74.8 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
 Identities = 44/130 (33%), Positives = 74/130 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQL 76
             +G G  GL+NLGNTC++N++LQCLS+T PLR++ +  +F++ +       + +L E F  
Sbjct:   207 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG--GRAQELTEAFAD 264

Query:    77 IFNMLWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             +   LW  DS    +P +F+   +          K   +F GY QQD+ EFL +L++ LH
Sbjct:   265 VIGALWHPDSCEAVNPTRFRAVFQ----------KYVPSFSGYSQQDAQEFLKLLMERLH 314

Query:   136 EDLKESGEKS 145
              ++   G ++
Sbjct:   315 LEINRRGRRA 324

 Score = 121 (47.7 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
 Identities = 28/73 (38%), Positives = 42/73 (57%)

Query:   134 LHEDLKESGEKS----WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSL 189
             LHE+ + S +      W  + ++  S I +LF GQLKS + C  C   S+TFEVF ++SL
Sbjct:   344 LHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSL 403

Query:   190 PLPSNDYCSLRVS 202
             P+P   +   +VS
Sbjct:   404 PIPKKGFAGGKVS 416


>UNIPROTKB|O57429 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0048471 GO:GO:0046872
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOVERGEN:HBG011164 MEROPS:C19.013 EMBL:AF016107
            IPI:IPI00577228 UniGene:Gga.454 ProteinModelPortal:O57429
            SMR:O57429 Uniprot:O57429
        Length = 357

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 72/196 (36%), Positives = 103/196 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             GLTGL+NLGNTC++NSILQCLSNT  LR+Y +  ++ R +    S+    L  EF  +  
Sbjct:    17 GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNN-SRMRTALMSEFAKLIQ 75

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
             +LW       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++ 
Sbjct:    76 LLWTS-----SPNDSVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVN 126

Query:   140 E----------------SGEKS---WGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                EKS   W  ++++  S +S+LF GQLKS++ C  C   S+ 
Sbjct:   127 RVLVRPRANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTA 186

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+P   Y
Sbjct:   187 FDPFWDLSLPIPKKGY 202


>UNIPROTKB|F1RYM1 [details] [associations]
            symbol:USP50 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:CU469118
            Ensembl:ENSSSCT00000005123 Uniprot:F1RYM1
        Length = 376

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 73/190 (38%), Positives = 106/190 (55%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             G+TGL+NLGNTCY+N+ILQCL + SPL EYF++   + +TA   K   ++A  F  +   
Sbjct:    45 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSG--KYITAL-QKDCSEVATAFAYVMTD 101

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W GDS   SP+ F+     +G     +  MK+T     QQD+ EFL  +++ LHE LK+
Sbjct:   102 MWLGDSECVSPEIFR---SALGNLYPAL--MKKT-----QQDAQEFLIYVLNELHEALKK 151

Query:   141 SGEKSWGEFRK----------KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
                +   E R              SII+ LF GQL  ++IC  C+  +   EVF+ + LP
Sbjct:   152 YHRRRSYENRSIPRCCRKMIASESSIITRLFEGQLSYSIICLKCENCTYKNEVFTVLPLP 211

Query:   191 LPSNDYCSLR 200
             +PS   CSL+
Sbjct:   212 IPSEYECSLQ 221


>UNIPROTKB|F1LYZ4 [details] [associations]
            symbol:F1LYZ4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000097591 IPI:IPI00767267
            Ensembl:ENSRNOT00000015238 Uniprot:F1LYZ4
        Length = 390

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 75/190 (39%), Positives = 106/190 (55%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             G+TGL+NLGNTCY+N+ILQCL +TSPL EYF++   + +TA   K   ++   F  +   
Sbjct:    43 GVTGLRNLGNTCYMNAILQCLCSTSPLVEYFLSG--KYITAL-QKDCSEVTTAFAYLMTD 99

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W GDS   SP       E+   F   VG +   F    QQD+ EFL  +++ LHE LK+
Sbjct:   100 MWLGDSDCVSP-------EI---FLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKK 149

Query:   141 -----SGEKSWGE--FRK---KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
                  + EK   +   RK      SII+ LF GQL  ++ C  C+  +   EVF+ +SLP
Sbjct:   150 HCRGRASEKRTAQNCCRKVPAHETSIITRLFEGQLSYSITCLKCETCTYKNEVFTILSLP 209

Query:   191 LPSNDYCSLR 200
             +PS   CSL+
Sbjct:   210 IPSEYECSLQ 219


>UNIPROTKB|A5PKF9 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 HOGENOM:HOG000264375
            MEROPS:C19.014 HOVERGEN:HBG000864 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:DAAA02073014 EMBL:DAAA02073015
            IPI:IPI00824936 UniGene:Bt.43412 EMBL:BC142473
            Ensembl:ENSBTAT00000022310 InParanoid:A5PKF9 Uniprot:A5PKF9
        Length = 910

 Score = 296 (109.3 bits), Expect = 4.8e-25, P = 4.8e-25
 Identities = 72/205 (35%), Positives = 106/205 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++A+ +  +
Sbjct:   253 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADL 312

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   PQ FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   313 VKQAWSGHHRSIVPQVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 362

Query:   138 L-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                   +E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   363 LNRIKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 422

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +S+PLP +    + V F
Sbjct:   423 VTFDPFCYLSVPLPVSHKRVMEVFF 447


>UNIPROTKB|F1MH36 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 IPI:IPI00715496 UniGene:Bt.24990 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:DAAA02006959
            Ensembl:ENSBTAT00000029184 Uniprot:F1MH36
        Length = 565

 Score = 198 (74.8 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 44/130 (33%), Positives = 74/130 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQL 76
             +G G  GL+NLGNTC++N++LQCLS+T PLR++ +  +F++ +       + +L E F  
Sbjct:   207 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG--GRAQELTEAFAD 264

Query:    77 IFNMLWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             +   LW  DS    +P +F+   +          K   +F GY QQD+ EFL +L++ LH
Sbjct:   265 VIGALWHPDSCEAVNPTRFRAVFQ----------KYVPSFSGYSQQDAQEFLKLLMERLH 314

Query:   136 EDLKESGEKS 145
              ++   G ++
Sbjct:   315 LEINRRGRRA 324

 Score = 119 (46.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             W  + ++  S I +LF GQLKS + C  C   S+TFEVF ++SLP+P   +   +VS
Sbjct:   359 WKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVS 415


>UNIPROTKB|E2RGE7 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0019784 "NEDD8-specific
            protease activity" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 CTD:27005 KO:K11833 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:AAEX03018447 EMBL:AAEX03018448
            RefSeq:XP_536136.3 ProteinModelPortal:E2RGE7
            Ensembl:ENSCAFT00000020298 GeneID:478979 KEGG:cfa:478979
            NextBio:20854234 Uniprot:E2RGE7
        Length = 565

 Score = 198 (74.8 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 44/130 (33%), Positives = 74/130 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQL 76
             +G G  GL+NLGNTC++N++LQCLS+T PLR++ +  +F++ +       + +L E F  
Sbjct:   207 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG--GRAQELTEAFAD 264

Query:    77 IFNMLWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             +   LW  DS    +P +F+   +          K   +F GY QQD+ EFL +L++ LH
Sbjct:   265 VIGALWHPDSCEAVNPTRFRAVFQ----------KYVPSFSGYSQQDAQEFLKLLMERLH 314

Query:   136 EDLKESGEKS 145
              ++   G ++
Sbjct:   315 LEINRRGRRA 324

 Score = 119 (46.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             W  + ++  S I +LF GQLKS + C  C   S+TFEVF ++SLP+P   +   +VS
Sbjct:   359 WKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVS 415


>UNIPROTKB|Q9UK80 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS;IDA;TAS] [GO:0006464 "cellular
            protein modification process" evidence=NAS] [GO:0008234
            "cysteine-type peptidase activity" evidence=ISS;IMP] [GO:0003713
            "transcription coactivator activity" evidence=ISS] [GO:0016578
            "histone deubiquitination" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=IDA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            EMBL:CH471121 EMBL:AL590714 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 PDB:2Y5B PDB:3I3T
            PDB:3MTN PDBsum:2Y5B PDBsum:3I3T PDBsum:3MTN MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD
            EMBL:AF177758 EMBL:AF233442 EMBL:AK292319 EMBL:AF217979
            EMBL:AB208899 EMBL:BC003130 EMBL:BC090946 EMBL:BC136291
            IPI:IPI00007262 IPI:IPI00376946 IPI:IPI00873033
            RefSeq:NP_001014443.1 RefSeq:NP_036607.3 UniGene:Hs.8015
            ProteinModelPortal:Q9UK80 SMR:Q9UK80 IntAct:Q9UK80 STRING:Q9UK80
            PhosphoSite:Q9UK80 DMDM:10720334 PRIDE:Q9UK80
            Ensembl:ENST00000289865 Ensembl:ENST00000368001
            Ensembl:ENST00000368002 GeneID:27005 KEGG:hsa:27005 UCSC:uc010pkc.2
            GeneCards:GC01P161129 HGNC:HGNC:12620 HPA:HPA028397 MIM:604729
            neXtProt:NX_Q9UK80 PharmGKB:PA37246 OMA:NVQPRVG BRENDA:3.1.2.15
            EvolutionaryTrace:Q9UK80 GenomeRNAi:27005 NextBio:49506
            PMAP-CutDB:Q9UK80 Bgee:Q9UK80 CleanEx:HS_USP21
            Genevestigator:Q9UK80 GermOnline:ENSG00000143258 Uniprot:Q9UK80
        Length = 565

 Score = 198 (74.8 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 44/130 (33%), Positives = 74/130 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQL 76
             +G G  GL+NLGNTC++N++LQCLS+T PLR++ +  +F++ +       + +L E F  
Sbjct:   207 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG--GRAQELTEAFAD 264

Query:    77 IFNMLWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             +   LW  DS    +P +F+   +          K   +F GY QQD+ EFL +L++ LH
Sbjct:   265 VIGALWHPDSCEAVNPTRFRAVFQ----------KYVPSFSGYSQQDAQEFLKLLMERLH 314

Query:   136 EDLKESGEKS 145
              ++   G ++
Sbjct:   315 LEINRRGRRA 324

 Score = 119 (46.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             W  + ++  S I +LF GQLKS + C  C   S+TFEVF ++SLP+P   +   +VS
Sbjct:   359 WKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVS 415


>UNIPROTKB|F1S196 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 KO:K11833 OMA:NVQPRVG GeneTree:ENSGT00670000098024
            EMBL:CU463216 RefSeq:XP_001927817.1 UniGene:Ssc.6203
            Ensembl:ENSSSCT00000006971 GeneID:100152455 KEGG:ssc:100152455
            Uniprot:F1S196
        Length = 565

 Score = 198 (74.8 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 44/130 (33%), Positives = 74/130 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQL 76
             +G G  GL+NLGNTC++N++LQCLS+T PLR++ +  +F++ +       + +L E F  
Sbjct:   207 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG--GRAQELTEAFAD 264

Query:    77 IFNMLWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             +   LW  DS    +P +F+   +          K   +F GY QQD+ EFL +L++ LH
Sbjct:   265 VIGALWHPDSCEAVNPTRFRAVFQ----------KYVPSFSGYSQQDAQEFLKLLMERLH 314

Query:   136 EDLKESGEKS 145
              ++   G ++
Sbjct:   315 LEINRRGRRA 324

 Score = 119 (46.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             W  + ++  S I +LF GQLKS + C  C   S+TFEVF ++SLP+P   +   +VS
Sbjct:   359 WKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVS 415


>UNIPROTKB|K7GLG2 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GeneTree:ENSGT00670000097750 EMBL:FP710256
            Ensembl:ENSSSCT00000034750 Uniprot:K7GLG2
        Length = 756

 Score = 294 (108.6 bits), Expect = 5.5e-25, P = 5.5e-25
 Identities = 72/205 (35%), Positives = 105/205 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:    99 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADL 158

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   159 VKQAWSGHHRSIVPHVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 208

Query:   138 L-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                   +E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   209 LNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 268

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +S+PLP +    + V F
Sbjct:   269 VTFDPFCYLSVPLPVSHKRVMEVFF 293


>UNIPROTKB|J9PB02 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            Ensembl:ENSCAFT00000044288 Uniprot:J9PB02
        Length = 757

 Score = 294 (108.6 bits), Expect = 5.5e-25, P = 5.5e-25
 Identities = 72/205 (35%), Positives = 105/205 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:    99 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPLGMKGEIAEAYADL 158

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   159 VKQAWSGHHRSIVPHVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 208

Query:   138 L-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                   +E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   209 LNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 268

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +S+PLP +    + V F
Sbjct:   269 VTFDPFCYLSVPLPVSHKRVMEVFF 293


>UNIPROTKB|J9P3M3 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11835
            CTD:8237 GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            RefSeq:NP_001183969.1 Ensembl:ENSCAFT00000047257 GeneID:404014
            KEGG:cfa:404014 Uniprot:J9P3M3
        Length = 770

 Score = 294 (108.6 bits), Expect = 5.8e-25, P = 5.8e-25
 Identities = 72/205 (35%), Positives = 105/205 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:    99 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPLGMKGEIAEAYADL 158

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   159 VKQAWSGHHRSIVPHVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 208

Query:   138 L-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                   +E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   209 LNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 268

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +S+PLP +    + V F
Sbjct:   269 VTFDPFCYLSVPLPVSHKRVMEVFF 293


>UNIPROTKB|F1PQR0 [details] [associations]
            symbol:USP50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:AAEX03016119
            EMBL:AAEX03016120 Ensembl:ENSCAFT00000024071 Uniprot:F1PQR0
        Length = 334

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 74/192 (38%), Positives = 107/192 (55%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             G+TGL+NLGNTCY+N+ILQCL + SPL EYFV+   + +TA   +   ++A  F  +   
Sbjct:    42 GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFVSG--KYITAL-QRDCREVATAFAYVMTD 98

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W GDS   SP+ F+            +G +   F    QQD+ EFL  +++ LHE LK+
Sbjct:    99 MWLGDSECVSPEVFR----------SALGSLYPAFMKKTQQDAQEFLIYVLNELHEALKK 148

Query:   141 -------SGEKS--WGEFRK---KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
                    S EK       RK      SII++LF GQL  +++C  C+  +   EVF+ +S
Sbjct:   149 IQYHRKRSHEKGSVLRCCRKVIASESSIITQLFEGQLNYSIMCLKCENCTYKNEVFTVLS 208

Query:   189 LPLPSNDYCSLR 200
             LP+PS   CSL+
Sbjct:   209 LPIPSEYECSLQ 220


>UNIPROTKB|Q2KJ72 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0019784 "NEDD8-specific protease
            activity" evidence=ISS] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0016578 "histone
            deubiquitination" evidence=ISS] [GO:0003713 "transcription
            coactivator activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0019784
            eggNOG:COG5533 HOGENOM:HOG000231498 HSSP:P43593 EMBL:BC105488
            IPI:IPI00715496 RefSeq:NP_001039841.1 UniGene:Bt.24990
            ProteinModelPortal:Q2KJ72 MEROPS:C19.034 GeneID:534273
            KEGG:bta:534273 CTD:27005 HOVERGEN:HBG011164 InParanoid:Q2KJ72
            KO:K11833 OrthoDB:EOG4229JD NextBio:20876334 Uniprot:Q2KJ72
        Length = 565

 Score = 197 (74.4 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
 Identities = 44/130 (33%), Positives = 74/130 (56%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQL 76
             +G G  GL+NLGNTC++N++LQCLS+T PLR++ +  +F++ +       + +L E F  
Sbjct:   207 LGSGHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGG--GRAQELTEAFAD 264

Query:    77 IFNMLWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             +   LW  DS    +P +F+   +          K   +F GY QQD+ EFL +L++ LH
Sbjct:   265 VIGALWHPDSCEAVNPTRFRAVFQ----------KYVPSFSGYSQQDAQEFLKLLMERLH 314

Query:   136 EDLKESGEKS 145
              ++   G ++
Sbjct:   315 LEINRRGRRA 324

 Score = 119 (46.9 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             W  + ++  S I +LF GQLKS + C  C   S+TFEVF ++SLP+P   +   +VS
Sbjct:   359 WKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVS 415


>UNIPROTKB|F1RWV6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:GICGLTN
            EMBL:FP710256 Ensembl:ENSSSCT00000013421 Uniprot:F1RWV6
        Length = 921

 Score = 294 (108.6 bits), Expect = 8.1e-25, P = 8.1e-25
 Identities = 72/205 (35%), Positives = 105/205 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:   259 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADL 318

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   319 VKQAWSGHHRSIVPHVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 368

Query:   138 L-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                   +E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   369 LNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 428

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +S+PLP +    + V F
Sbjct:   429 VTFDPFCYLSVPLPVSHKRVMEVFF 453


>MGI|MGI:2384312 [details] [associations]
            symbol:Usp11 "ubiquitin specific peptidase 11" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] Reactome:REACT_93132
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:2384312
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:CH466625 EMBL:AL807240
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 MEROPS:C19.014
            HOVERGEN:HBG000864 OrthoDB:EOG4QRH3H CTD:8237 EMBL:AK166523
            EMBL:BC005470 IPI:IPI00378163 RefSeq:NP_663603.3 UniGene:Mm.34489
            ProteinModelPortal:Q99K46 SMR:Q99K46 STRING:Q99K46
            PhosphoSite:Q99K46 PaxDb:Q99K46 PRIDE:Q99K46
            Ensembl:ENSMUST00000033383 GeneID:236733 KEGG:mmu:236733
            GeneTree:ENSGT00670000097750 InParanoid:B1AXB2 NextBio:383051
            Bgee:Q99K46 CleanEx:MM_USP11 Genevestigator:Q99K46
            GermOnline:ENSMUSG00000031066 Uniprot:Q99K46
        Length = 921

 Score = 294 (108.6 bits), Expect = 8.1e-25, P = 8.1e-25
 Identities = 75/203 (36%), Positives = 104/203 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G+LAE +  +
Sbjct:   254 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADL 313

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   314 VKQTWSGYHRSIVPNVFKNK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 363

Query:   138 LK-------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                    E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   364 LNRVKKKEYVELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 423

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  +S+PLP    CS RV
Sbjct:   424 VTFDPFCYLSVPLP---VCSRRV 443


>UNIPROTKB|Q5D006 [details] [associations]
            symbol:Usp11 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 RGD:1303052
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:CH474009 HOGENOM:HOG000264375
            KO:K11835 MEROPS:C19.014 HOVERGEN:HBG000864 CTD:8237 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:BC090333 IPI:IPI00421768
            RefSeq:NP_001008861.2 UniGene:Rn.2492 Ensembl:ENSRNOT00000051956
            GeneID:408217 KEGG:rno:408217 InParanoid:Q5D006 NextBio:696448
            Genevestigator:Q5D006 Uniprot:Q5D006
        Length = 921

 Score = 294 (108.6 bits), Expect = 8.1e-25, P = 8.1e-25
 Identities = 75/203 (36%), Positives = 104/203 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G+LAE +  +
Sbjct:   254 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADL 313

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   314 VKQTWSGYHRSIVPNVFKNK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 363

Query:   138 LK-------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                    E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   364 LNRVKKKEYVELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 423

Query:   179 STFEVFSNVSLPLPSNDYCSLRV 201
              TF+ F  +S+PLP    CS RV
Sbjct:   424 VTFDPFCYLSVPLP---VCSRRV 443


>ZFIN|ZDB-GENE-041212-59 [details] [associations]
            symbol:usp2a "ubiquitin specific peptidase 2a"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            ZFIN:ZDB-GENE-041212-59 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000098024 EMBL:BX548078 IPI:IPI00993616
            Ensembl:ENSDART00000123148 ArrayExpress:E7FEC1 Bgee:E7FEC1
            Uniprot:E7FEC1
        Length = 600

 Score = 290 (107.1 bits), Expect = 8.5e-25, P = 8.5e-25
 Identities = 72/196 (36%), Positives = 102/196 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +    R      ++T   L EEF  +   
Sbjct:   266 GLVGLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLIQT 325

Query:    81 LW-AGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH---- 135
             +W +  S   SP +FK           ++ +    F GY QQD+ EFL  L+D LH    
Sbjct:   326 MWTSSSSEAVSPSEFKT----------QIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 375

Query:   136 ----------EDL-----KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                       ED      +E G+K W ++ ++  S I +LF GQLKS++ C  C   S+ 
Sbjct:   376 RVTVRPRGNTEDFDHLPDEEKGKKMWSKYLEREDSKIVDLFVGQLKSSLTCSECGYCSTV 435

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+    Y
Sbjct:   436 FDPFWDLSLPIAKKGY 451


>UNIPROTKB|F1PWM6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            Ensembl:ENSCAFT00000023833 Uniprot:F1PWM6
        Length = 955

 Score = 294 (108.6 bits), Expect = 8.6e-25, P = 8.6e-25
 Identities = 72/205 (35%), Positives = 105/205 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:   293 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPLGMKGEIAEAYADL 352

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LHED
Sbjct:   353 VKQAWSGHHRSIVPHVFKTK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLHED 402

Query:   138 L-------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L                   +E  +++W   +++N S+I + F+G  KST++C +C   S
Sbjct:   403 LNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVS 462

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +S+PLP +    + V F
Sbjct:   463 VTFDPFCYLSVPLPVSHKRVMEVFF 487


>DICTYBASE|DDB_G0293770 [details] [associations]
            symbol:DDB_G0293770 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            dictyBase:DDB_G0293770 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AAFI02000219 KO:K11835 RefSeq:XP_628978.1
            ProteinModelPortal:Q54BB6 EnsemblProtists:DDB0237691 GeneID:8629409
            KEGG:ddi:DDB_G0293770 OMA:YTAFALN ProtClustDB:CLSZ2497072
            Uniprot:Q54BB6
        Length = 1085

 Score = 294 (108.6 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 75/205 (36%), Positives = 104/205 (50%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+TGL NLGNTC++NS LQCLSNT PL +YF++ +++  +         G LA ++  +
Sbjct:   335 PGITGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYAEL 394

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                +W G      P+KFK + E   +F  +       F GY Q DS E L  L+D LHED
Sbjct:   395 ITEIWEGTYSSVYPRKFKGQIE---RFAPQ-------FAGYHQHDSQELLAFLLDGLHED 444

Query:   138 LKESGEK-------------------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L +  +K                    W   + +N S+I + F  QLKS ++C  CQ  S
Sbjct:   445 LNKVKKKPFHEGKDYDGRPDDVIAKEQWEMHKSRNNSVIVDWFQSQLKSKLVCPVCQNIS 504

Query:   179 STFEVFSNVSLPLPSNDYCSLRVSF 203
              TF+ F  +SLPLPS        SF
Sbjct:   505 ITFDPFMYLSLPLPSETIKQFNFSF 529


>UNIPROTKB|F1SAF6 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 OMA:SASHRSY EMBL:CU915638
            RefSeq:XP_003357373.1 Ensembl:ENSSSCT00000016486 GeneID:100520041
            KEGG:ssc:100520041 ArrayExpress:F1SAF6 Uniprot:F1SAF6
        Length = 396

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 69/196 (35%), Positives = 102/196 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIFN 79
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +   + R ++ + S  +  L EEF  +  
Sbjct:    56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTA-LMEEFAKLIQ 114

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++ 
Sbjct:   115 TIWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 165

Query:   140 -------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                E G + W ++ ++  S I +LF GQLKS++ C +C   S+ 
Sbjct:   166 RVTVRPKSSPEGLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTV 225

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+    Y
Sbjct:   226 FDPFWDLSLPIAKRGY 241


>SGD|S000003733 [details] [associations]
            symbol:UBP12 "Ubiquitin-specific protease" species:4932
            "Saccharomyces cerevisiae" [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00695 SGD:S000003733 GO:GO:0005634
            GO:GO:0005737 EMBL:BK006943 EMBL:X77688 GO:GO:0006511 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5560 KO:K11835 GeneTree:ENSGT00670000097750
            OrthoDB:EOG4FR40X EMBL:Z49472 PIR:S46636 RefSeq:NP_012338.1
            ProteinModelPortal:P39538 SMR:P39538 DIP:DIP-6312N IntAct:P39538
            MINT:MINT-704453 STRING:P39538 MEROPS:C19.103 PaxDb:P39538
            PeptideAtlas:P39538 PRIDE:P39538 EnsemblFungi:YJL197W GeneID:853242
            KEGG:sce:YJL197W CYGD:YJL197w HOGENOM:HOG000057142 OMA:WYHTFTI
            NextBio:973472 Genevestigator:P39538 GermOnline:YJL197W
            Uniprot:P39538
        Length = 1254

 Score = 190 (71.9 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
 Identities = 51/133 (38%), Positives = 66/133 (49%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFV-----TEFKRSMTAAYSKTSGKLAEEFQ 75
             G TGL NLGNTCY+NS LQCL +   LR+YF+      E        Y    G +A  F 
Sbjct:   362 GTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPLGYH---GYVARAFS 418

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
              +   L+   +R    Q+       +  FK  +G     F GY QQDS EFL  L+D+LH
Sbjct:   419 DLVQKLF--QNRMSIMQRNAAFPPSM--FKSTIGHFNSMFSGYMQQDSQEFLAFLLDSLH 474

Query:   136 EDLKESGEKSWGE 148
             EDL    +K + E
Sbjct:   475 EDLNRIIKKEYTE 487

 Score = 128 (50.1 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   138 LKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLP 192
             +K+  + +W    K+N S+I++LF G  KST+ C  CQ  S TF+ +++V+LPLP
Sbjct:   503 VKKLADDTWEMHLKRNCSVITDLFVGMYKSTLYCPECQNVSITFDPYNDVTLPLP 557


>UNIPROTKB|E9PPM2 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            CTD:9099 EMBL:AP003396 RefSeq:NP_001230688.1 UniGene:Hs.524085
            DNASU:9099 GeneID:9099 KEGG:hsa:9099 HGNC:HGNC:12618 ChiTaRS:USP2
            GenomeRNAi:9099 NextBio:34107 IPI:IPI01009002
            ProteinModelPortal:E9PPM2 SMR:E9PPM2 Ensembl:ENST00000455332
            UCSC:uc001pwn.4 ArrayExpress:E9PPM2 Bgee:E9PPM2 Uniprot:E9PPM2
        Length = 362

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 69/196 (35%), Positives = 99/196 (50%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIFN 79
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +   + R +    S     L EEF  +  
Sbjct:    22 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHG-SNAHTALVEEFAKLIQ 80

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++ 
Sbjct:    81 TIWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 131

Query:   140 -------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                E G + W ++ ++  S I +LF GQLKS++ C +C   S+ 
Sbjct:   132 RVTLRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTV 191

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+    Y
Sbjct:   192 FDPFWDLSLPIAKRGY 207


>UNIPROTKB|F1NES4 [details] [associations]
            symbol:LOC100858727 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS01360
            PROSITE:PS50235 PROSITE:PS50865 GO:GO:0005829 GO:GO:0046872
            GO:GO:0008270 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0006511
            GO:GO:0004843 GO:GO:0004221 InterPro:IPR007052 PROSITE:PS51203
            GO:GO:0048642 GeneTree:ENSGT00670000097750 InterPro:IPR015054
            Pfam:PF08959 EMBL:AADN02014171 IPI:IPI00585404
            Ensembl:ENSGALT00000011032 Uniprot:F1NES4
        Length = 610

 Score = 279 (103.3 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 72/196 (36%), Positives = 97/196 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK---TSGKLAEEFQ 75
             PG TGL NLGNTC++NS++Q LSNT  LR+YF    F+  +   Y+    T G+LA  F 
Sbjct:   221 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEIN--YNNPLGTGGRLAIGFA 278

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             ++   LW G    F P K K            V      F GY Q D+ EF+  L+D LH
Sbjct:   279 MLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGLH 328

Query:   136 EDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL               G       E++W   + +N S I +LF GQ KS ++C  C +
Sbjct:   329 EDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSK 388

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  + +PLP
Sbjct:   389 VSITFDPFLYLPVPLP 404


>ASPGD|ASPL0000007671 [details] [associations]
            symbol:AN6354 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5560 KO:K11835 OrthoDB:EOG4FR40X
            RefSeq:XP_663958.1 ProteinModelPortal:Q5AZC6
            EnsemblFungi:CADANIAT00006630 GeneID:2871251 KEGG:ani:AN6354.2
            HOGENOM:HOG000166458 OMA:CVRSVEE Uniprot:Q5AZC6
        Length = 1418

 Score = 180 (68.4 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
 Identities = 46/131 (35%), Positives = 69/131 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKT-SGKLAEEF-QLI 77
             G TGL NLGNTCY+NS LQC+ +   L  YF+ + +K+ +  +     +G +A+ +  L+
Sbjct:   458 GNTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDVAKAYANLL 517

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
              N+        F+P++ K            +G+    F GY QQDS EFL  L+D L ED
Sbjct:   518 RNIYDEAGHGSFAPRQLK----------NTIGRYGPAFSGYGQQDSQEFLLFLLDGLQED 567

Query:   138 LKESGEKSWGE 148
             L    +K + E
Sbjct:   568 LNRIQKKPYIE 578

 Score = 134 (52.2 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
 Identities = 25/68 (36%), Positives = 42/68 (61%)

Query:   136 EDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             E LKE  +K W  ++ +N S+I++LF G  KST++C  C + S  F+ F+N++L LP  +
Sbjct:   591 EALKEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPVCDKVSIIFDPFNNLTLQLPIEN 650

Query:   196 YCSLRVSF 203
               S  + +
Sbjct:   651 LWSKSIFY 658


>UNIPROTKB|Q2KHV7 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0050821 "protein stabilization"
            evidence=ISS] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0031625 "ubiquitin
            protein ligase binding" evidence=IEA] [GO:0030332 "cyclin binding"
            evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0046872 GO:GO:0045931
            GO:GO:0008234 GO:GO:0000122 GO:GO:0007049 GO:GO:0007517
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            EMBL:BC112866 IPI:IPI00694687 RefSeq:NP_001039728.1
            UniGene:Bt.21721 ProteinModelPortal:Q2KHV7 SMR:Q2KHV7
            MEROPS:C19.013 PRIDE:Q2KHV7 Ensembl:ENSBTAT00000012857
            GeneID:522980 KEGG:bta:522980 CTD:9099 HOGENOM:HOG000048720
            InParanoid:Q2KHV7 OMA:GFKPGPP OrthoDB:EOG47M1XH NextBio:20873641
            Uniprot:Q2KHV7
        Length = 606

 Score = 278 (102.9 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 69/196 (35%), Positives = 102/196 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIFN 79
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +   + R ++ + S+    L EEF  +  
Sbjct:   266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHS-SRAHTALMEEFAKLIQ 324

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++ 
Sbjct:   325 TIWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 375

Query:   140 -------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                E G + W ++ ++  S I +LF GQLKS++ C +C   S+ 
Sbjct:   376 RVIARPKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTV 435

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+    Y
Sbjct:   436 FDPFWDLSLPITKRGY 451


>WB|WBGene00000874 [details] [associations]
            symbol:cyk-3 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 Pfam:PF00443 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            GO:GO:0009792 GO:GO:0006915 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 EMBL:FO081350
            KO:K11837 GeneTree:ENSGT00680000099843 UniGene:Cel.17005
            GeneID:175853 KEGG:cel:CELE_ZK328.1 CTD:175853 NextBio:889976
            RefSeq:NP_001022992.1 ProteinModelPortal:Q8WT44 SMR:Q8WT44
            IntAct:Q8WT44 MINT:MINT-6668483 STRING:Q8WT44 MEROPS:C19.A44
            PRIDE:Q8WT44 EnsemblMetazoa:ZK328.1b UCSC:ZK328.1b
            WormBase:ZK328.1b HOGENOM:HOG000018770 InParanoid:Q8WT44
            OMA:IALANHY ArrayExpress:Q8WT44 Uniprot:Q8WT44
        Length = 1178

 Score = 158 (60.7 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
 Identities = 27/57 (47%), Positives = 43/57 (75%)

Query:   139 KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             +E  E+SW E+ K+N+S++++LF GQL+S +IC  CQ +SS FE F+++SLP+   D
Sbjct:   716 EEKAERSWTEYEKQNESLVTQLFTGQLRSRLICRTCQSSSSVFEPFTSLSLPIGFED 772

 Score = 154 (59.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
 Identities = 39/127 (30%), Positives = 56/127 (44%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAE---EFQL 76
             PG  GL N GN CY N+ +QCL+  SPL +YF+ E         +   G  AE   E+  
Sbjct:   567 PGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAK 626

Query:    77 IFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
             +   +WA   +  +P  F           + +      F   EQ D  EF+  L+D LH 
Sbjct:   627 LLREMWAAKKKNIAPNDFN----------DAIRLSSDMFECSEQHDCQEFVAFLLDQLHT 676

Query:   137 DLKESGE 143
              + ES +
Sbjct:   677 SMYESNK 683


>UNIPROTKB|E2RSX3 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0050821 "protein
            stabilization" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 CTD:9099 OMA:GFKPGPP EMBL:AAEX03003436
            EMBL:AAEX03003437 RefSeq:XP_859639.1 ProteinModelPortal:E2RSX3
            Ensembl:ENSCAFT00000019129 GeneID:608188 KEGG:cfa:608188
            NextBio:20893859 Uniprot:E2RSX3
        Length = 606

 Score = 277 (102.6 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 69/196 (35%), Positives = 101/196 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIFN 79
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +   + R ++ + S     L EEF  +  
Sbjct:   266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHS-SNVHTALMEEFAKLIQ 324

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++ 
Sbjct:   325 TIWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 375

Query:   140 -------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                E G + W ++ ++  S I +LF GQLKS++ C +C   S+ 
Sbjct:   376 RVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTV 435

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+    Y
Sbjct:   436 FDPFWDLSLPIAKRGY 451


>UNIPROTKB|I3LI16 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0050821 "protein stabilization"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 EMBL:CU915638 GeneID:100520041
            KEGG:ssc:100520041 RefSeq:XP_003129987.1 Ensembl:ENSSSCT00000024719
            Uniprot:I3LI16
        Length = 606

 Score = 277 (102.6 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 69/196 (35%), Positives = 102/196 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIFN 79
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +   + R ++ + S  +  L EEF  +  
Sbjct:   266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTA-LMEEFAKLIQ 324

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++ 
Sbjct:   325 TIWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 375

Query:   140 -------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                E G + W ++ ++  S I +LF GQLKS++ C +C   S+ 
Sbjct:   376 RVTVRPKSSPEGLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTV 435

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+    Y
Sbjct:   436 FDPFWDLSLPIAKRGY 451


>MGI|MGI:1858178 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005813 "centrosome" evidence=ISO] [GO:0005938 "cell cortex"
            evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030332 "cyclin
            binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=ISO] [GO:0042802 "identical protein binding"
            evidence=IDA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA]
            [GO:0048642 "negative regulation of skeletal muscle tissue
            development" evidence=ISO] [GO:0048643 "positive regulation of
            skeletal muscle tissue development" evidence=ISO] [GO:0050821
            "protein stabilization" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1858178 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 GO:GO:0046872
            GO:GO:0045931 GO:GO:0008234 GO:GO:0000122 GO:GO:0007049
            GO:GO:0042802 GO:GO:0007517 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642
            HOGENOM:HOG000231498 HOVERGEN:HBG011164 KO:K11833
            GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AY255637 EMBL:AY255638
            EMBL:AY255639 EMBL:AY255640 EMBL:AB041799 EMBL:AK138799
            EMBL:BC017517 EMBL:AF079565 IPI:IPI00377286 IPI:IPI00409197
            IPI:IPI00785316 IPI:IPI00785464 RefSeq:NP_058088.2
            RefSeq:NP_932759.1 RefSeq:NP_932760.2 UniGene:Mm.272770
            ProteinModelPortal:O88623 SMR:O88623 STRING:O88623
            PhosphoSite:O88623 PRIDE:O88623 Ensembl:ENSMUST00000034508
            Ensembl:ENSMUST00000065461 Ensembl:ENSMUST00000114830
            Ensembl:ENSMUST00000176416 Ensembl:ENSMUST00000177054 GeneID:53376
            KEGG:mmu:53376 UCSC:uc009pbn.1 UCSC:uc009pbp.1 UCSC:uc012grp.1
            InParanoid:O88623 NextBio:310185 Bgee:O88623 CleanEx:MM_USP2
            Genevestigator:O88623 GermOnline:ENSMUSG00000032010 Uniprot:O88623
        Length = 613

 Score = 277 (102.6 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 68/195 (34%), Positives = 97/195 (49%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +           S     L EEF  +   
Sbjct:   273 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 332

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL-- 138
             +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++  
Sbjct:   333 IWTS-----SPNDVVSPSE----FKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNR 383

Query:   139 -----------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTF 181
                              +E G + W ++ ++  S I +LF GQLKS++ C +C   S+ F
Sbjct:   384 VAARPKASPETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVF 443

Query:   182 EVFSNVSLPLPSNDY 196
             + F ++SLP+    Y
Sbjct:   444 DPFWDLSLPIAKRGY 458


>TAIR|locus:2139222 [details] [associations]
            symbol:UBP10 "AT4G10590" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL161517 EMBL:AL049523 EMBL:AF118222 HSSP:P40818
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            ProtClustDB:CLSN2689389 EMBL:AY054463 EMBL:BT010363 IPI:IPI00534120
            PIR:T04194 RefSeq:NP_567363.1 RefSeq:NP_849356.1 UniGene:At.10964
            UniGene:At.67146 ProteinModelPortal:Q93Y01 SMR:Q93Y01
            MEROPS:C19.A03 PaxDb:Q93Y01 PRIDE:Q93Y01 EnsemblPlants:AT4G10590.1
            EnsemblPlants:AT4G10590.2 GeneID:826651 KEGG:ath:AT4G10590
            TAIR:At4g10590 InParanoid:Q93Y01 OMA:MDQDILL PhylomeDB:Q93Y01
            Genevestigator:Q93Y01 Uniprot:Q93Y01
        Length = 910

 Score = 279 (103.3 bits), Expect = 3.2e-23, P = 3.2e-23
 Identities = 72/202 (35%), Positives = 105/202 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK-TSGKLAEEFQLIFN 79
             GL GL NLGNTC++NS LQCL++T P+ EYF+ ++   +         G+LA  F  +  
Sbjct:   301 GLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLK 360

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL- 138
              LW+      +P+ FK K   + +F  +       F GY Q DS E L  L+D LHEDL 
Sbjct:   361 KLWSSGRNSVAPRAFKTK---LARFAPQ-------FSGYNQHDSQELLAFLLDGLHEDLN 410

Query:   139 ----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                       K+S         E+ W   + +N S+I ++  GQ KST++C  C + S T
Sbjct:   411 KVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPACGKISIT 470

Query:   181 FEVFSNVSLPLPSNDYCSLRVS 202
             F+ F  +S+PLPS    S+ V+
Sbjct:   471 FDPFMYLSVPLPSTLTRSMTVT 492


>ZFIN|ZDB-GENE-030131-1949 [details] [associations]
            symbol:usp8 "ubiquitin specific peptidase 8"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 ZFIN:ZDB-GENE-030131-1949
            GO:GO:0008234 Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 InterPro:IPR015063 Pfam:PF08969
            EMBL:CU928201 IPI:IPI00613650 Ensembl:ENSDART00000093376
            Uniprot:E7F1N3
        Length = 1099

 Score = 280 (103.6 bits), Expect = 3.4e-23, P = 3.4e-23
 Identities = 69/198 (34%), Positives = 102/198 (51%)

Query:    14 IFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRS--MTAAYSKTSGKLA 71
             +F   GP LTGL+NLGNTCY+NSILQCL NT  + +YF   + +     A      G++A
Sbjct:   756 VFGGQGPLLTGLRNLGNTCYMNSILQCLCNTVAMADYFNRNYYQDDINRANILGHKGEVA 815

Query:    72 EEFQLIFNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTIL 130
             EEF ++   LW G  +  SP  FK    ++  +F     +  +    +     HE L   
Sbjct:   816 EEFSVVMKALWLGQYKMISPLDFKGTICKINSRFSSYEHQDSQELLLFLMDGLHEDLNKA 875

Query:   131 I--------DTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
                      +  H D   + + +W + ++ N+SII  LF GQ KSTV C +CQ  S TFE
Sbjct:   876 DKRRGYKEEEIEHLDDVSAADLAWSKHKQLNESIIVALFQGQFKSTVQCMSCQHKSRTFE 935

Query:   183 VFSNVSLPLPSNDYCSLR 200
              F  ++L + ++  CSL+
Sbjct:   936 TFMYLTLEMTASSKCSLQ 953


>RGD|621073 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=IEA;ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;ISS;IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
            "centrosome" evidence=IDA] [GO:0005938 "cell cortex"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA;ISO;ISS;IDA]
            [GO:0030332 "cyclin binding" evidence=IEA;ISO] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IEA;ISO] [GO:0042802
            "identical protein binding" evidence=IEA;ISO] [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0048471 "perinuclear region
            of cytoplasm" evidence=IEA;ISO;IDA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IDA]
            [GO:0048643 "positive regulation of skeletal muscle tissue
            development" evidence=IDA] [GO:0050821 "protein stabilization"
            evidence=IEA;ISO;ISS] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:621073 GO:GO:0005938 GO:GO:0005634 GO:GO:0005813 GO:GO:0048471
            GO:GO:0050821 GO:GO:0046872 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0007049 GO:GO:0007517 GO:GO:0006511
            EMBL:CH473975 GO:GO:0016579 GO:GO:0004221 GO:GO:0048643
            eggNOG:COG5533 HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            MEROPS:C19.013 CTD:9099 OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453
            EMBL:AF202454 EMBL:AF106658 EMBL:AF106659 EMBL:BC085719
            IPI:IPI00213304 IPI:IPI00213307 RefSeq:NP_446226.2
            UniGene:Rn.203590 ProteinModelPortal:Q5U349 SMR:Q5U349
            DIP:DIP-48683N STRING:Q5U349 Ensembl:ENSRNOT00000009975
            Ensembl:ENSRNOT00000036051 GeneID:115771 KEGG:rno:115771
            UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 275 (101.9 bits), Expect = 3.9e-23, P = 3.9e-23
 Identities = 68/195 (34%), Positives = 97/195 (49%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +           S     L EEF  +   
Sbjct:   278 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 337

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL-- 138
             +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++  
Sbjct:   338 IWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNR 388

Query:   139 -----------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTF 181
                              +E G + W ++ ++  S I +LF GQLKS++ C +C   S+ F
Sbjct:   389 VAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVF 448

Query:   182 EVFSNVSLPLPSNDY 196
             + F ++SLP+    Y
Sbjct:   449 DPFWDLSLPIAKRGY 463


>UNIPROTKB|Q5U349 [details] [associations]
            symbol:Usp2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:10116 "Rattus norvegicus" [GO:0005938 "cell cortex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:621073 GO:GO:0005938
            GO:GO:0005634 GO:GO:0005813 GO:GO:0048471 GO:GO:0050821
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008234 GO:GO:0000122
            GO:GO:0007049 GO:GO:0007517 GO:GO:0006511 EMBL:CH473975
            GO:GO:0016579 GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533
            HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498 HOVERGEN:HBG011164
            KO:K11833 GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453 EMBL:AF202454
            EMBL:AF106658 EMBL:AF106659 EMBL:BC085719 IPI:IPI00213304
            IPI:IPI00213307 RefSeq:NP_446226.2 UniGene:Rn.203590
            ProteinModelPortal:Q5U349 SMR:Q5U349 DIP:DIP-48683N STRING:Q5U349
            Ensembl:ENSRNOT00000009975 Ensembl:ENSRNOT00000036051 GeneID:115771
            KEGG:rno:115771 UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 275 (101.9 bits), Expect = 3.9e-23, P = 3.9e-23
 Identities = 68/195 (34%), Positives = 97/195 (49%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +           S     L EEF  +   
Sbjct:   278 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 337

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL-- 138
             +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++  
Sbjct:   338 IWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNR 388

Query:   139 -----------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTF 181
                              +E G + W ++ ++  S I +LF GQLKS++ C +C   S+ F
Sbjct:   389 VAARPKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVF 448

Query:   182 EVFSNVSLPLPSNDY 196
             + F ++SLP+    Y
Sbjct:   449 DPFWDLSLPIAKRGY 463


>UNIPROTKB|O75604 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA] [GO:0048642
            "negative regulation of skeletal muscle tissue development"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            [GO:0050821 "protein stabilization" evidence=IMP;IDA] [GO:0045931
            "positive regulation of mitotic cell cycle" evidence=IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IMP;IDA] [GO:0030332 "cyclin
            binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 EMBL:CH471065
            GO:GO:0046872 GO:GO:0045931 GO:GO:0000122 GO:GO:0007049
            GO:GO:0007517 GO:GO:0006511 GO:GO:0004197 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642 PDB:3NHE
            PDBsum:3NHE PDB:2HD5 PDBsum:2HD5 PDB:2IBI PDB:3V6C PDB:3V6E
            PDBsum:2IBI PDBsum:3V6C PDBsum:3V6E HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH EMBL:AF079564 EMBL:AF440755 EMBL:AK057225
            EMBL:AK292255 EMBL:EF445044 EMBL:AP003396 EMBL:BC002854
            EMBL:BC002955 EMBL:BC041366 IPI:IPI00216783 IPI:IPI00298910
            IPI:IPI00969446 IPI:IPI00969474 RefSeq:NP_001230688.1
            RefSeq:NP_004196.4 RefSeq:NP_741994.1 UniGene:Hs.524085
            ProteinModelPortal:O75604 SMR:O75604 DIP:DIP-29134N IntAct:O75604
            MINT:MINT-4304073 STRING:O75604 PhosphoSite:O75604 PaxDb:O75604
            PRIDE:O75604 DNASU:9099 Ensembl:ENST00000260187
            Ensembl:ENST00000525735 GeneID:9099 KEGG:hsa:9099 UCSC:uc001pwl.4
            UCSC:uc001pwm.4 GeneCards:GC11M119259 HGNC:HGNC:12618 HPA:HPA006777
            HPA:HPA007222 MIM:604725 neXtProt:NX_O75604 PharmGKB:PA37244
            InParanoid:O75604 OMA:SASHRSY PhylomeDB:O75604 ChEMBL:CHEMBL1293227
            ChiTaRS:USP2 EvolutionaryTrace:O75604 GenomeRNAi:9099 NextBio:34107
            ArrayExpress:O75604 Bgee:O75604 CleanEx:HS_USP2
            Genevestigator:O75604 GermOnline:ENSG00000036672 Uniprot:O75604
        Length = 605

 Score = 274 (101.5 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 69/196 (35%), Positives = 99/196 (50%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIFN 79
             GL GL+NLGNTC++NSILQCLSNT  LR+Y +   + R +    S     L EEF  +  
Sbjct:   265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHG-SNAHTALVEEFAKLIQ 323

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              +W       SP       E    FK ++ +    F GY QQD+ EFL  L+D LH ++ 
Sbjct:   324 TIWTS-----SPNDVVSPSE----FKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 374

Query:   140 -------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                E G + W ++ ++  S I +LF GQLKS++ C +C   S+ 
Sbjct:   375 RVTLRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTV 434

Query:   181 FEVFSNVSLPLPSNDY 196
             F+ F ++SLP+    Y
Sbjct:   435 FDPFWDLSLPIAKRGY 450


>TAIR|locus:2139202 [details] [associations]
            symbol:UBP9 "AT4G10570" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL161517 EMBL:AL049523 EMBL:AF118222 EMBL:BT004132
            IPI:IPI00521385 PIR:T04192 RefSeq:NP_192795.3 UniGene:At.48842
            HSSP:P40818 ProteinModelPortal:Q9ZSB5 SMR:Q9ZSB5 MEROPS:C19.A02
            PaxDb:Q9ZSB5 PRIDE:Q9ZSB5 EnsemblPlants:AT4G10570.1 GeneID:826649
            KEGG:ath:AT4G10570 TAIR:At4g10570 eggNOG:COG5560
            HOGENOM:HOG000264375 InParanoid:Q9ZSB5 KO:K11835 OMA:ENSANEC
            PhylomeDB:Q9ZSB5 ProtClustDB:CLSN2689389 Genevestigator:Q9ZSB5
            Uniprot:Q9ZSB5
        Length = 923

 Score = 277 (102.6 bits), Expect = 5.4e-23, P = 5.4e-23
 Identities = 70/193 (36%), Positives = 101/193 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK-TSGKLAEEFQLIFN 79
             GL GL NLGNTC++NS LQCL++T P+ EYF+ ++   +         G+LA  F  +  
Sbjct:   302 GLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLK 361

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL- 138
              LW+      +P+ FK K   + +F  +       F GY Q DS E L  L+D LHEDL 
Sbjct:   362 KLWSSGRNAVAPRAFKTK---LARFAPQ-------FSGYNQHDSQELLAFLLDGLHEDLN 411

Query:   139 ----------KES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                       K+S         E+ W   + +N S+I ++  GQ KST++C  C + S T
Sbjct:   412 KVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPVCGKISIT 471

Query:   181 FEVFSNVSLPLPS 193
             F+ F  +S+PLPS
Sbjct:   472 FDPFMYLSVPLPS 484


>CGD|CAL0003741 [details] [associations]
            symbol:DOA4 species:5476 "Candida albicans" [GO:0071285
            "cellular response to lithium ion" evidence=IMP] [GO:0005768
            "endosome" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006275
            "regulation of DNA replication" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0010992 "ubiquitin homeostasis"
            evidence=IEA] [GO:0010995 "free ubiquitin chain depolymerization"
            evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IEA]
            [GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
            GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
            RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
            KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
        Length = 811

 Score = 190 (71.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 51/129 (39%), Positives = 70/129 (54%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF---VTE------FKRSMTAAYSK-TSGKLAE 72
             TGL NLGN+CY+N ++QCL+ T  L  +F   +TE      +KR +       T G L  
Sbjct:   421 TGLVNLGNSCYMNCVIQCLAATPQLTSFFFPTITESFSDHSYKRHINVNNKLGTKGMLTT 480

Query:    73 EF-QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILI 131
              F +LI +ML   + R FSP KFK   +++G          R F  ++QQD  EFL  L+
Sbjct:   481 SFVELILSML-NNNGRSFSPSKFK---KIMGSLSPA-----RQFASFDQQDCIEFLNFLL 531

Query:   132 DTLHEDLKE 140
             D LHEDL +
Sbjct:   532 DALHEDLNQ 540

 Score = 110 (43.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 24/57 (42%), Positives = 33/57 (57%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             W  + K N SII + F GQ  S + C  C  TS+T+  FS +SLP+P     S++VS
Sbjct:   576 WERYLKLNFSIIVDYFQGQYLSQLKCLECGFTSTTYNAFSILSLPIPEKLNKSMKVS 632


>UNIPROTKB|Q59ZY4 [details] [associations]
            symbol:DOA4 "Ubiquitin carboxyl-terminal hydrolase"
            species:237561 "Candida albicans SC5314" [GO:0071285 "cellular
            response to lithium ion" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
            GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
            RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
            KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
        Length = 811

 Score = 190 (71.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 51/129 (39%), Positives = 70/129 (54%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF---VTE------FKRSMTAAYSK-TSGKLAE 72
             TGL NLGN+CY+N ++QCL+ T  L  +F   +TE      +KR +       T G L  
Sbjct:   421 TGLVNLGNSCYMNCVIQCLAATPQLTSFFFPTITESFSDHSYKRHINVNNKLGTKGMLTT 480

Query:    73 EF-QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILI 131
              F +LI +ML   + R FSP KFK   +++G          R F  ++QQD  EFL  L+
Sbjct:   481 SFVELILSML-NNNGRSFSPSKFK---KIMGSLSPA-----RQFASFDQQDCIEFLNFLL 531

Query:   132 DTLHEDLKE 140
             D LHEDL +
Sbjct:   532 DALHEDLNQ 540

 Score = 110 (43.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 24/57 (42%), Positives = 33/57 (57%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             W  + K N SII + F GQ  S + C  C  TS+T+  FS +SLP+P     S++VS
Sbjct:   576 WERYLKLNFSIIVDYFQGQYLSQLKCLECGFTSTTYNAFSILSLPIPEKLNKSMKVS 632


>UNIPROTKB|E7ESU0 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            PROSITE:PS51203 EMBL:AC135506 HGNC:HGNC:12617 ChiTaRS:USP19
            InterPro:IPR015054 Pfam:PF08959 IPI:IPI01010013
            ProteinModelPortal:E7ESU0 SMR:E7ESU0 Ensembl:ENST00000398896
            UCSC:uc003cwa.3 ArrayExpress:E7ESU0 Bgee:E7ESU0 Uniprot:E7ESU0
        Length = 1089

 Score = 275 (101.9 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 73/197 (37%), Positives = 97/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   302 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 358

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G    F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   359 AVLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 408

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   409 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 468

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   469 KVSITFDPFLYLPVPLP 485


>RGD|1303276 [details] [associations]
            symbol:Usp19 "ubiquitin specific peptidase 19" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=ISO;ISS] [GO:0005829 "cytosol" evidence=ISO] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0014732 "skeletal muscle
            atrophy" evidence=IEP] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IMP]
            [GO:0030433 "ER-associated protein catabolic process"
            evidence=ISO;ISS] [GO:0031647 "regulation of protein stability"
            evidence=IDA] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=ISO;ISS] [GO:0048642 "negative regulation of
            skeletal muscle tissue development" evidence=ISO;ISS] [GO:0090068
            "positive regulation of cell cycle process" evidence=IMP]
            [GO:1900037 "regulation of cellular response to hypoxia"
            evidence=ISO;ISS] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            RGD:1303276 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
            GO:GO:0031647 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0030433
            GO:GO:1900037 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0034976 InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969
            PROSITE:PS51203 GO:GO:0048642 GO:GO:0014732 GO:GO:0090068
            MEROPS:C19.024 CTD:10869 HOVERGEN:HBG061889 KO:K11847
            InterPro:IPR015054 Pfam:PF08959 EMBL:AY605065 IPI:IPI00421941
            RefSeq:NP_001001516.1 UniGene:Rn.13484 HSSP:O94966
            ProteinModelPortal:Q6J1Y9 SMR:Q6J1Y9 PhosphoSite:Q6J1Y9
            PRIDE:Q6J1Y9 GeneID:361190 KEGG:rno:361190 NextBio:675485
            Genevestigator:Q6J1Y9 Uniprot:Q6J1Y9
        Length = 1357

 Score = 276 (102.2 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 73/197 (37%), Positives = 98/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   533 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 589

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G  + F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   590 AVLLRALWKGTHQAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 639

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   640 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 699

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   700 KVSITFDPFLYLPVPLP 716


>MGI|MGI:1918722 [details] [associations]
            symbol:Usp19 "ubiquitin specific peptidase 19" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IMP] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0005789 "endoplasmic reticulum membrane" evidence=ISO]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
            [GO:0031647 "regulation of protein stability" evidence=ISO]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IMP]
            [GO:0090068 "positive regulation of cell cycle process"
            evidence=ISO] [GO:1900037 "regulation of cellular response to
            hypoxia" evidence=ISO] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            MGI:MGI:1918722 GO:GO:0016021 GO:GO:0005829 GO:GO:0005789
            GO:GO:0046872 GO:GO:0008270 GO:GO:0031647 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0030433 GO:GO:1900037 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0034976 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0048642
            GO:GO:0014732 GO:GO:0090068 HSSP:P40818 eggNOG:COG5560
            GeneTree:ENSGT00670000097750 MEROPS:C19.024 CTD:10869
            HOGENOM:HOG000074206 HOVERGEN:HBG061889 KO:K11847 ChiTaRS:USP19
            InterPro:IPR015054 Pfam:PF08959 EMBL:AK122396 EMBL:AK146504
            EMBL:AK160807 EMBL:AK171942 EMBL:BC046824 EMBL:BC060613
            IPI:IPI00420483 IPI:IPI00457619 RefSeq:NP_001161843.1
            RefSeq:NP_001161844.1 RefSeq:NP_001161845.1 RefSeq:NP_082080.3
            RefSeq:NP_663382.2 UniGene:Mm.289706 ProteinModelPortal:Q3UJD6
            SMR:Q3UJD6 STRING:Q3UJD6 PhosphoSite:Q3UJD6 PaxDb:Q3UJD6
            PRIDE:Q3UJD6 Ensembl:ENSMUST00000006854 Ensembl:ENSMUST00000085044
            GeneID:71472 KEGG:mmu:71472 UCSC:uc009rpt.2 UCSC:uc009rpu.2
            OMA:PQCKQHR OrthoDB:EOG4NVZJG NextBio:333851 Bgee:Q3UJD6
            CleanEx:MM_USP19 Genevestigator:Q3UJD6 Uniprot:Q3UJD6
        Length = 1360

 Score = 276 (102.2 bits), Expect = 1.2e-22, P = 1.2e-22
 Identities = 73/197 (37%), Positives = 98/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   536 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 592

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G  + F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   593 AVLLRALWKGTHQAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 642

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   643 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 702

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   703 KVSITFDPFLYLPVPLP 719


>UNIPROTKB|O94966 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase 19"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0090068 "positive regulation of cell cycle process"
            evidence=ISS] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=IEP] [GO:0014732 "skeletal muscle atrophy"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:1900037 "regulation of cellular response to hypoxia"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0048642 "negative regulation of skeletal muscle tissue
            development" evidence=ISS] [GO:0030433 "ER-associated protein
            catabolic process" evidence=IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IDA] [GO:0031647 "regulation of protein
            stability" evidence=ISS] [GO:0005789 "endoplasmic reticulum
            membrane" evidence=IDA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
            GO:GO:0031647 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0030433
            GO:GO:1900037 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0034976 InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969
            PROSITE:PS51203 GO:GO:0048642 GO:GO:0014732 GO:GO:0090068
            eggNOG:COG5560 EMBL:AB020698 EMBL:AK294756 EMBL:AC135506
            EMBL:BC048269 EMBL:BC065909 EMBL:BC082241 EMBL:BC106029
            EMBL:BC142660 EMBL:BC146752 IPI:IPI00016589 IPI:IPI00654743
            IPI:IPI00797161 IPI:IPI00853489 IPI:IPI00927646
            RefSeq:NP_001186089.1 RefSeq:NP_001186090.1 RefSeq:NP_001186091.1
            RefSeq:NP_006668.1 UniGene:Hs.255596 UniGene:Hs.734003 PDB:1WH0
            PDBsum:1WH0 ProteinModelPortal:O94966 SMR:O94966 IntAct:O94966
            MINT:MINT-4658026 STRING:O94966 MEROPS:C19.024 PhosphoSite:O94966
            PaxDb:O94966 PRIDE:O94966 Ensembl:ENST00000398888
            Ensembl:ENST00000417901 Ensembl:ENST00000434032 GeneID:10869
            KEGG:hsa:10869 UCSC:uc003cwb.3 UCSC:uc003cwd.2 CTD:10869
            GeneCards:GC03M049120 HGNC:HGNC:12617 MIM:614471 neXtProt:NX_O94966
            PharmGKB:PA37243 HOGENOM:HOG000074206 HOVERGEN:HBG061889 KO:K11847
            ChiTaRS:USP19 EvolutionaryTrace:O94966 GenomeRNAi:10869
            NextBio:41271 ArrayExpress:O94966 Bgee:O94966 CleanEx:HS_USP19
            Genevestigator:O94966 GermOnline:ENSG00000172046 InterPro:IPR015054
            Pfam:PF08959 Uniprot:O94966
        Length = 1318

 Score = 275 (101.9 bits), Expect = 1.5e-22, P = 1.5e-22
 Identities = 73/197 (37%), Positives = 97/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   494 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 550

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G    F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   551 AVLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 600

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   601 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 660

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   661 KVSITFDPFLYLPVPLP 677


>UNIPROTKB|E7EST9 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AC135506
            HGNC:HGNC:12617 ChiTaRS:USP19 InterPro:IPR015054 Pfam:PF08959
            IPI:IPI00796756 ProteinModelPortal:E7EST9 SMR:E7EST9
            Ensembl:ENST00000398898 ArrayExpress:E7EST9 Bgee:E7EST9
            Uniprot:E7EST9
        Length = 1321

 Score = 275 (101.9 bits), Expect = 1.5e-22, P = 1.5e-22
 Identities = 73/197 (37%), Positives = 97/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   534 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 590

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G    F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   591 AVLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 640

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   641 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 700

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   701 KVSITFDPFLYLPVPLP 717


>UNIPROTKB|B5MEG5 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AC135506
            HGNC:HGNC:12617 HOGENOM:HOG000074206 HOVERGEN:HBG061889
            ChiTaRS:USP19 InterPro:IPR015054 Pfam:PF08959 IPI:IPI00789672
            ProteinModelPortal:B5MEG5 SMR:B5MEG5 STRING:B5MEG5 PRIDE:B5MEG5
            Ensembl:ENST00000398892 UCSC:uc003cwc.2 ArrayExpress:B5MEG5
            Bgee:B5MEG5 Uniprot:B5MEG5
        Length = 1358

 Score = 275 (101.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 73/197 (37%), Positives = 97/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   534 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 590

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G    F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   591 AVLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 640

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   641 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 700

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   701 KVSITFDPFLYLPVPLP 717


>UNIPROTKB|E7EN22 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AC135506
            RefSeq:NP_001186091.1 UniGene:Hs.255596 UniGene:Hs.734003
            GeneID:10869 KEGG:hsa:10869 CTD:10869 HGNC:HGNC:12617 KO:K11847
            ChiTaRS:USP19 GenomeRNAi:10869 NextBio:41271 InterPro:IPR015054
            Pfam:PF08959 IPI:IPI00927399 ProteinModelPortal:E7EN22 SMR:E7EN22
            PRIDE:E7EN22 Ensembl:ENST00000453664 UCSC:uc011bcg.2
            ArrayExpress:E7EN22 Bgee:E7EN22 Uniprot:E7EN22
        Length = 1372

 Score = 275 (101.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 73/197 (37%), Positives = 97/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   585 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 641

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G    F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   642 AVLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 691

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   692 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 751

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   752 KVSITFDPFLYLPVPLP 768


>UNIPROTKB|F1SKI2 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0048642 "negative regulation of
            skeletal muscle tissue development" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GO:GO:0048642 GeneTree:ENSGT00670000097750 InterPro:IPR015054
            Pfam:PF08959 OMA:PQCKQHR EMBL:CU856115 Ensembl:ENSSSCT00000012453
            Uniprot:F1SKI2
        Length = 1424

 Score = 275 (101.9 bits), Expect = 1.7e-22, P = 1.7e-22
 Identities = 73/197 (37%), Positives = 97/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   637 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 693

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G    F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   694 AVLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 743

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   744 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 803

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   804 KVSITFDPFLYLPVPLP 820


>UNIPROTKB|F1MUD4 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0048642 "negative regulation of
            skeletal muscle tissue development" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GO:GO:0048642 GeneTree:ENSGT00670000097750 InterPro:IPR015054
            Pfam:PF08959 OMA:PQCKQHR EMBL:DAAA02054428 IPI:IPI00725491
            Ensembl:ENSBTAT00000025198 Uniprot:F1MUD4
        Length = 1436

 Score = 275 (101.9 bits), Expect = 1.7e-22, P = 1.7e-22
 Identities = 73/197 (37%), Positives = 97/197 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAA--YSK---TSGKLAEEF 74
             PG TGL NLGNTC++NS++Q LSNT  LR++F     RS  A   Y+    T G+LA  F
Sbjct:   649 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFF---HDRSFEAEINYNNPLGTGGRLAIGF 705

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              ++   LW G    F P K K            V      F GY Q D+ EF+  L+D L
Sbjct:   706 AVLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGL 755

Query:   135 HEDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQ 175
             HEDL               G       E++W   + +N S I +LF GQ KS ++C  C 
Sbjct:   756 HEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCA 815

Query:   176 ETSSTFEVFSNVSLPLP 192
             + S TF+ F  + +PLP
Sbjct:   816 KVSITFDPFLYLPVPLP 832


>UNIPROTKB|Q28CN3 [details] [associations]
            symbol:usp33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0016477 "cell
            migration" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 EMBL:CR926290
            EMBL:BC171081 RefSeq:NP_001016228.1 UniGene:Str.42260
            ProteinModelPortal:Q28CN3 SMR:Q28CN3 GeneID:548982 KEGG:xtr:548982
            Xenbase:XB-GENE-1016674 Uniprot:Q28CN3
        Length = 892

 Score = 198 (74.8 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 49/122 (40%), Positives = 67/122 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL  YF+           ++T  K  L + +Q + 
Sbjct:   146 GLTGLKNIGNTCYMNAALQALSNCPPLTHYFLD------CGGLARTDKKPALCKSYQKLM 199

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
             + +W     + +   F +   L    K     +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   200 SDIW-----HKNRPGFVIPTNLFQGIKS----VNPTFRGYSQQDAQEFLRCLMDVLHEEL 250

Query:   139 KE 140
             KE
Sbjct:   251 KE 252

 Score = 101 (40.6 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query:   150 RKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             +KK  S+I+++F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   426 QKKYHSVIADIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPIPGKE 471


>ZFIN|ZDB-GENE-040426-2323 [details] [associations]
            symbol:usp33 "ubiquitin specific peptidase 33"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-040426-2323 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:BX649634 EMBL:BC066557 IPI:IPI00512747
            RefSeq:NP_998392.1 UniGene:Dr.32515 ProteinModelPortal:A5PMR2
            SMR:A5PMR2 Ensembl:ENSDART00000018114 GeneID:406508 KEGG:dre:406508
            NextBio:20818084 ArrayExpress:A5PMR2 Bgee:A5PMR2 Uniprot:A5PMR2
        Length = 897

 Score = 195 (73.7 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
 Identities = 52/122 (42%), Positives = 66/122 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+            KT  K  L + +Q + 
Sbjct:   154 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLE------CGGLVKTDKKPALCKSYQKLI 207

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW     + +   + V   L    K  V  M   FRGY QQDS EFL  L+D LHE+L
Sbjct:   208 TDLW-----HKNRNAYVVPTNLFQGIKA-VNPM---FRGYSQQDSQEFLRCLMDQLHEEL 258

Query:   139 KE 140
             KE
Sbjct:   259 KE 260

 Score = 103 (41.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
 Identities = 20/46 (43%), Positives = 29/46 (63%)

Query:   150 RKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             ++K  SIISE+F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   431 QRKYHSIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIPGKE 476


>UNIPROTKB|E2R1W4 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GeneTree:ENSGT00670000097750 InterPro:IPR015054 Pfam:PF08959
            EMBL:AAEX03012231 Ensembl:ENSCAFT00000018474 Uniprot:E2R1W4
        Length = 1315

 Score = 273 (101.2 bits), Expect = 2.5e-22, P = 2.5e-22
 Identities = 71/196 (36%), Positives = 97/196 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK---TSGKLAEEFQ 75
             PG TGL NLGNTC++NS++Q LSNT  LR++F    F+  +   Y+    T G+LA  F 
Sbjct:   491 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEIN--YNNPLGTGGRLAIGFA 548

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             ++   LW G    F P K K            V      F GY Q D+ EF+  L+D LH
Sbjct:   549 VLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGLH 598

Query:   136 EDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL               G       E++W   + +N S I +LF GQ KS ++C  C +
Sbjct:   599 EDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAK 658

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  + +PLP
Sbjct:   659 VSITFDPFLYLPVPLP 674


>UNIPROTKB|J9NU38 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GeneTree:ENSGT00670000097750 InterPro:IPR015054 Pfam:PF08959
            EMBL:AAEX03012231 Ensembl:ENSCAFT00000043874 Uniprot:J9NU38
        Length = 1334

 Score = 273 (101.2 bits), Expect = 2.5e-22, P = 2.5e-22
 Identities = 71/196 (36%), Positives = 97/196 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK---TSGKLAEEFQ 75
             PG TGL NLGNTC++NS++Q LSNT  LR++F    F+  +   Y+    T G+LA  F 
Sbjct:   536 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEIN--YNNPLGTGGRLAIGFA 593

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             ++   LW G    F P K K            V      F GY Q D+ EF+  L+D LH
Sbjct:   594 VLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGLH 643

Query:   136 EDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL               G       E++W   + +N S I +LF GQ KS ++C  C +
Sbjct:   644 EDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAK 703

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  + +PLP
Sbjct:   704 VSITFDPFLYLPVPLP 719


>UNIPROTKB|F1PF24 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GeneTree:ENSGT00670000097750 InterPro:IPR015054 Pfam:PF08959
            OMA:PQCKQHR EMBL:AAEX03012231 Ensembl:ENSCAFT00000018484
            Uniprot:F1PF24
        Length = 1447

 Score = 273 (101.2 bits), Expect = 2.8e-22, P = 2.8e-22
 Identities = 71/196 (36%), Positives = 97/196 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK---TSGKLAEEFQ 75
             PG TGL NLGNTC++NS++Q LSNT  LR++F    F+  +   Y+    T G+LA  F 
Sbjct:   660 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEIN--YNNPLGTGGRLAIGFA 717

Query:    76 LIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
             ++   LW G    F P K K            V      F GY Q D+ EF+  L+D LH
Sbjct:   718 VLLRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGLH 767

Query:   136 EDLKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
             EDL               G       E++W   + +N S I +LF GQ KS ++C  C +
Sbjct:   768 EDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAK 827

Query:   177 TSSTFEVFSNVSLPLP 192
              S TF+ F  + +PLP
Sbjct:   828 VSITFDPFLYLPVPLP 843


>FB|FBgn0036913 [details] [associations]
            symbol:CG8334 species:7227 "Drosophila melanogaster"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            InterPro:IPR001125 InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13499 PRINTS:PR00450
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            EMBL:AE014296 GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 KO:K11837
            GeneTree:ENSGT00680000099843 RefSeq:NP_649153.1 UniGene:Dm.15133
            ProteinModelPortal:Q9VW49 SMR:Q9VW49 MEROPS:C19.A48
            EnsemblMetazoa:FBtr0074890 GeneID:40169 KEGG:dme:Dmel_CG8334
            UCSC:CG8334-RA FlyBase:FBgn0036913 InParanoid:Q9VW49 OMA:QFWYLIS
            OrthoDB:EOG43TX9J PhylomeDB:Q9VW49 GenomeRNAi:40169 NextBio:817379
            ArrayExpress:Q9VW49 Bgee:Q9VW49 Uniprot:Q9VW49
        Length = 1736

 Score = 272 (100.8 bits), Expect = 4.5e-22, P = 4.5e-22
 Identities = 71/196 (36%), Positives = 102/196 (52%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK--TSGKLAEEFQLI 77
             PG TGL NLGNTC++N+ LQ L NT PL +YF  E  R    A +K  T G+LA  +  +
Sbjct:   674 PGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAEL 733

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEV--GKMKRTFRGYEQQ-DS-HEFLTILIDT 133
                +W   +R  +P K +     V K+  +   G    +    E   D+ HE L  +++ 
Sbjct:   734 LKEVWTATTRSVAPLKLRF---CVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEK 790

Query:   134 LHEDLKESGEK--------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFS 185
              + +LK+S  +        +W +   +N+SII +LFYGQLKS V C  C   S  F+ FS
Sbjct:   791 PYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFS 850

Query:   186 NVSLPLPSNDYCSLRV 201
              +SLPLP  +Y    V
Sbjct:   851 LLSLPLPVENYIYFEV 866


>UNIPROTKB|F1NPW7 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 EMBL:AADN02066916 EMBL:AADN02066917
            IPI:IPI00593248 Ensembl:ENSGALT00000005483 ArrayExpress:F1NPW7
            Uniprot:F1NPW7
        Length = 520

 Score = 164 (62.8 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
 Identities = 44/137 (32%), Positives = 68/137 (49%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   190 LCHELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 239

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D + ++L+  G K       S  +  K+   +++ +F+GQL S V C  C   S+T E
Sbjct:   240 LLDKVQQELESEGTKRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCITCNYKSNTVE 299

Query:   183 VFSNVSLPLPSNDYCSL 199
              F ++SL  P   Y S+
Sbjct:   300 PFWDLSLEFPER-YHSI 315

 Score = 124 (48.7 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
 Identities = 23/34 (67%), Positives = 28/34 (82%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT 53
             PG+TGL+NLGNTCY+NSILQ LS+    RE F+T
Sbjct:    81 PGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLT 114

 Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 11/39 (28%), Positives = 14/39 (35%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVF 184
             W E   + K  +  LF   L     CC    +S   E F
Sbjct:   391 WSERNHREKIGVHVLFDQVLNMEPYCCRDSLSSLDKETF 429


>UNIPROTKB|F1P4C5 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0051322 "anaphase" evidence=IEA] [GO:0060564 "negative
            regulation of mitotic anaphase-promoting complex activity"
            evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
            assembly checkpoint" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 GeneTree:ENSGT00690000101718 EMBL:AADN02005945
            IPI:IPI00600923 Ensembl:ENSGALT00000018595 Uniprot:F1P4C5
        Length = 717

 Score = 166 (63.5 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
 Identities = 41/136 (30%), Positives = 70/136 (51%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   386 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 435

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D + ++L+ +G +       +  +  K+  ++++ +F+GQL S V C  C   S+T E
Sbjct:   436 LLDKVQQELETTGTRYPALIPAAQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIE 495

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P   +C+
Sbjct:   496 PFWDLSLEFPERYHCN 511

 Score = 126 (49.4 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query:    17 TVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGK 69
             TV PG+TGL+NLGNTCY+NSILQ LS+    RE F+  +  ++     +  SGK
Sbjct:   269 TVTPGVTGLRNLGNTCYMNSILQVLSHLLIFRECFLKLDLNQTQELLATAASGK 322


>UNIPROTKB|F1LPJ7 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000101718 OMA:TMEEDKS
            IPI:IPI00369811 Ensembl:ENSRNOT00000066125 ArrayExpress:F1LPJ7
            Uniprot:F1LPJ7
        Length = 909

 Score = 186 (70.5 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
 Identities = 45/122 (36%), Positives = 65/122 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   151 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 204

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW          K +    +     + +  +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   205 TELW---------HKSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEEL 255

Query:   139 KE 140
             KE
Sbjct:   256 KE 257

 Score = 108 (43.1 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query:   135 HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             H+  + S  K   +  KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  
Sbjct:   422 HKKAQSSSPKRKKQ-HKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGK 480

Query:   195 D 195
             +
Sbjct:   481 E 481


>UNIPROTKB|F1LRN2 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0044297 GO:GO:0004221 IPI:IPI00949514
            Ensembl:ENSRNOT00000016022 ArrayExpress:F1LRN2 Uniprot:F1LRN2
        Length = 919

 Score = 186 (70.5 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
 Identities = 45/122 (36%), Positives = 65/122 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   169 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 222

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW          K +    +     + +  +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   223 TELW---------HKSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEEL 273

Query:   139 KE 140
             KE
Sbjct:   274 KE 275

 Score = 108 (43.1 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query:   135 HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             H+  + S  K   +  KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  
Sbjct:   440 HKKAQSSSPKRKKQ-HKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGK 498

Query:   195 D 195
             +
Sbjct:   499 E 499


>UNIPROTKB|E9PP86 [details] [associations]
            symbol:USP50 "Inactive ubiquitin carboxyl-terminal
            hydrolase 50" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            IPI:IPI00940487 UniGene:Hs.677758 HGNC:HGNC:20079 NextBio:100122
            CTD:373509 OMA:HFQGVTG EMBL:AC012170 RefSeq:NP_987090.2
            ProteinModelPortal:E9PP86 SMR:E9PP86 DNASU:373509
            Ensembl:ENST00000532404 GeneID:373509 KEGG:hsa:373509
            UCSC:uc021sky.1 GenomeRNAi:373509 ArrayExpress:E9PP86 Bgee:E9PP86
            Uniprot:E9PP86
        Length = 334

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 72/192 (37%), Positives = 105/192 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             G+TGL NLGNTC +N+I QCL +  PL EYF+T   + +TA  +  S ++A  F  +   
Sbjct:    42 GVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTG--KYITALQNDCS-EVATAFAYLMTD 98

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W GDS   SP       E+   F   +G +   F    QQD+ EFL  +++ LHE LK+
Sbjct:    99 MWLGDSDCVSP-------EI---FWSALGNLYPAFTKKMQQDAQEFLICVLNELHEALKK 148

Query:   141 ---SGEKSWGE------FRK---KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
                S  +S+ +       RK      SII++LF  QL  +++C  C++ +   EVF+  S
Sbjct:   149 YHYSRRRSYEKGSTQRCCRKWITTETSIITQLFEEQLNYSIVCLKCEKCTYKNEVFTVFS 208

Query:   189 LPLPSNDYCSLR 200
             LP+PS   CSLR
Sbjct:   209 LPIPSKYECSLR 220


>WB|WBGene00019259 [details] [associations]
            symbol:H34C03.2 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            GeneTree:ENSGT00670000097750 EMBL:FO080598 PIR:T33734
            RefSeq:NP_501035.1 ProteinModelPortal:Q9TYY8 SMR:Q9TYY8
            PaxDb:Q9TYY8 EnsemblMetazoa:H34C03.2 GeneID:177437
            KEGG:cel:CELE_H34C03.2 UCSC:H34C03.2 CTD:177437 WormBase:H34C03.2
            HOGENOM:HOG000017757 InParanoid:Q9TYY8 OMA:WKAFGIP NextBio:896816
            Uniprot:Q9TYY8
        Length = 900

 Score = 266 (98.7 bits), Expect = 7.7e-22, P = 7.7e-22
 Identities = 67/188 (35%), Positives = 95/188 (50%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG  GL NLGNTC++ S  QCLSN  PLREYF+   ++  +       T G LA     +
Sbjct:   272 PGACGLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGEL 331

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTIL-----I 131
                +W+GD    +P+KFK +  +   +F     +       Y     HE L  +     I
Sbjct:   332 MKGMWSGDYASINPRKFKSIIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIKKKPYI 391

Query:   132 DTLHEDLK----ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNV 187
             +   ED K    E   KSW  ++ +N SII +  +GQLKST+IC  C++ S  F+ F  +
Sbjct:   392 EDSDEDAKLPEAEYAAKSWEVYKMRNDSIIVDTLHGQLKSTLICPVCEKISIKFDPFGYL 451

Query:   188 SLPLPSND 195
             SLPLP  +
Sbjct:   452 SLPLPPKE 459


>UNIPROTKB|I3L7M6 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:CU915644
            Ensembl:ENSSSCT00000026836 Uniprot:I3L7M6
        Length = 901

 Score = 186 (70.5 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
 Identities = 49/121 (40%), Positives = 66/121 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLA-EEFQLIFN 79
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K A + +  +  
Sbjct:   152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPACKSYLKLMT 205

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   SR   P      +   G     +  +  TFRGY QQD+ EFL  L+D LHE+LK
Sbjct:   206 ELWH-KSR---PGSVVPTNLFQG-----IKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 256

Query:   140 E 140
             E
Sbjct:   257 E 257

 Score = 106 (42.4 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query:   135 HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             H+  + +      +  KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  
Sbjct:   422 HKKAQSASSPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGK 481

Query:   195 D 195
             +
Sbjct:   482 E 482


>FB|FBgn0033916 [details] [associations]
            symbol:CG8494 species:7227 "Drosophila melanogaster"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0007399
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 HSSP:Q93009
            MEROPS:C19.A26 UCSC:CG8494-RA FlyBase:FBgn0033916 ChiTaRS:CG8494
            EMBL:AY118676 ProteinModelPortal:Q8MSP3 PRIDE:Q8MSP3
            InParanoid:Q8MSP3 Bgee:Q8MSP3 Uniprot:Q8MSP3
        Length = 990

 Score = 187 (70.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
 Identities = 46/127 (36%), Positives = 67/127 (52%)

Query:    19 GPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-----EFKRSMTAAYSKTSGKLAEE 73
             G GL GL+N+ NTCY+NS LQ LSN  P+  YF+      E+    +A   K  G LA+ 
Sbjct:    91 GTGLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKPGG-LAKS 149

Query:    74 FQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDT 133
             ++ +   +W        P++F     ++   +  V  M   FRGY+Q D+ EFL   +D 
Sbjct:   150 YRRLMQEIWQDVD---DPKEFIAPRGILYGIRT-VHPM---FRGYQQHDTQEFLRCFMDQ 202

Query:   134 LHEDLKE 140
             LHE+L E
Sbjct:   203 LHEELTE 209

 Score = 105 (42.0 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
 Identities = 19/46 (41%), Positives = 32/46 (69%)

Query:   154 KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSL 199
             +SIIS++F G+L S+V C  C   S+  E F ++SLP+P+ D+ ++
Sbjct:   321 RSIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNV 366


>UNIPROTKB|Q0V9G5 [details] [associations]
            symbol:usp44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0051322 "anaphase" evidence=ISS] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=ISS] [GO:0090231 "regulation of spindle
            checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0090231
            eggNOG:COG5533 GO:GO:0051322 GO:GO:0060564 CTD:84101
            HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 EMBL:BC121579
            RefSeq:NP_001072389.1 UniGene:Str.5094 ProteinModelPortal:Q0V9G5
            GeneID:779843 KEGG:xtr:779843 Xenbase:XB-GENE-1014112
            Uniprot:Q0V9G5
        Length = 652

 Score = 161 (61.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 42/130 (32%), Positives = 67/130 (51%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   383 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 432

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D + ++L+ +G +       S  +  K+  +I++ +F+GQL S V C  C   S+T E
Sbjct:   433 LLDKVQQELETTGTRYPTLIPASQRKLIKQVLNIVNNIFHGQLLSQVTCLACDHKSNTIE 492

Query:   183 VFSNVSLPLP 192
              F ++SL  P
Sbjct:   493 PFWDLSLEFP 502

 Score = 126 (49.4 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query:    17 TVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGK 69
             TV PG+TGL+NLGNTCY+NSILQ LS+    RE F+  +  ++     +  SGK
Sbjct:   268 TVTPGVTGLRNLGNTCYMNSILQILSHLHVFRECFLQLDLNQTQELLAAAGSGK 321


>MGI|MGI:2159711 [details] [associations]
            symbol:Usp33 "ubiquitin specific peptidase 33" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IMP] [GO:0008152 "metabolic
            process" evidence=ISA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISO] [GO:0016477 "cell migration"
            evidence=IMP] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0044297 "cell
            body" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 MGI:MGI:2159711 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 HSSP:Q93009
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:AF383174 EMBL:BC005506 EMBL:BC031366
            EMBL:BC089315 EMBL:AK143844 IPI:IPI00319995 IPI:IPI00798461
            RefSeq:NP_001239415.1 RefSeq:NP_573510.2 UniGene:Mm.258320
            ProteinModelPortal:Q8R5K2 SMR:Q8R5K2 STRING:Q8R5K2
            PhosphoSite:Q8R5K2 PaxDb:Q8R5K2 PRIDE:Q8R5K2 DNASU:170822
            Ensembl:ENSMUST00000026507 Ensembl:ENSMUST00000117492 GeneID:170822
            KEGG:mmu:170822 UCSC:uc008rti.1 UCSC:uc008rtj.1 InParanoid:Q8R5K2
            NextBio:370477 Bgee:Q8R5K2 Genevestigator:Q8R5K2 Uniprot:Q8R5K2
        Length = 909

 Score = 186 (70.5 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
 Identities = 45/122 (36%), Positives = 65/122 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 205

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW          K +    +     + +  +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   206 TELW---------HKSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEEL 256

Query:   139 KE 140
             KE
Sbjct:   257 KE 258

 Score = 104 (41.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:   151 KKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   437 KKYRSVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKE 481


>UNIPROTKB|J9NW59 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            EMBL:AAEX03004889 Ensembl:ENSCAFT00000045024 Uniprot:J9NW59
        Length = 912

 Score = 184 (69.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
 Identities = 50/122 (40%), Positives = 66/122 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 205

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW   SR   P    V   L    K     +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   206 TELWH-KSR---PGSV-VPTTLFQGIKT----VNPTFRGYSQQDAQEFLRCLMDLLHEEL 256

Query:   139 KE 140
             KE
Sbjct:   257 KE 258

 Score = 106 (42.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query:   135 HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             H+  + +      +  KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  
Sbjct:   423 HKKAQSASSPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGK 482

Query:   195 D 195
             +
Sbjct:   483 E 483


>UNIPROTKB|Q5REG5 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037
            CTD:23032 EMBL:CR857564 EMBL:CR860104 RefSeq:NP_001124855.1
            UniGene:Pab.19411 ProteinModelPortal:Q5REG5 SMR:Q5REG5
            GeneID:100171716 KEGG:pon:100171716 InParanoid:Q5REG5
            Uniprot:Q5REG5
        Length = 914

 Score = 185 (70.2 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
 Identities = 48/122 (39%), Positives = 66/122 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 205

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW   SR   P      +   G     +  +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   206 TELWH-KSR---PGSVVPTNLFQG-----IKTVNPTFRGYSQQDAQEFLRCLMDLLHEEL 256

Query:   139 KE 140
             KE
Sbjct:   257 KE 258

 Score = 105 (42.0 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:   151 KKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   437 KKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKE 481


>UNIPROTKB|A0JM59 [details] [associations]
            symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560 CTD:10868
            HOVERGEN:HBG054196 KO:K11848 EMBL:BC125749 RefSeq:NP_001090641.1
            UniGene:Str.43868 ProteinModelPortal:A0JM59 SMR:A0JM59
            GeneID:100036606 KEGG:xtr:100036606 Xenbase:XB-GENE-966528
            Uniprot:A0JM59
        Length = 884

 Score = 183 (69.5 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
 Identities = 43/120 (35%), Positives = 65/120 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KN+GN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   143 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLISE 198

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             LW          K +  + +       +  +   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   199 LW---------HKKRPSYVVPSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLHEELKE 249

 Score = 106 (42.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query:   141 SGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             SG K   E R +  S+IS++F G + S V C  C   S+T E F ++SLP+P  +
Sbjct:   401 SGGKKRSEVRYR--SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIPGKE 453


>UNIPROTKB|A6QNM7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9913 "Bos taurus" [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0001664
            "G-protein coupled receptor binding" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:BC148905 IPI:IPI00708909
            RefSeq:NP_001094609.1 UniGene:Bt.46098 ProteinModelPortal:A6QNM7
            SMR:A6QNM7 STRING:A6QNM7 MEROPS:C19.037 Ensembl:ENSBTAT00000027667
            GeneID:531706 KEGG:bta:531706 CTD:23032 InParanoid:A6QNM7
            OMA:TMEEDKS OrthoDB:EOG4B8JC9 NextBio:20875513 Uniprot:A6QNM7
        Length = 912

 Score = 184 (69.8 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
 Identities = 50/122 (40%), Positives = 66/122 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 205

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW   SR   P    V   L    K     +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   206 TELWH-KSR---PGSV-VPTTLFQGIKT----VNPTFRGYSQQDAQEFLRCLMDLLHEEL 256

Query:   139 KE 140
             KE
Sbjct:   257 KE 258

 Score = 105 (42.0 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:   151 KKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   439 KKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKE 483


>UNIPROTKB|B1WBD7 [details] [associations]
            symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0004221 CTD:10868 HOVERGEN:HBG054196 KO:K11848
            EMBL:BC161716 RefSeq:NP_001121345.1 UniGene:Xl.16107
            ProteinModelPortal:B1WBD7 SMR:B1WBD7 GeneID:100158436
            KEGG:xla:100158436 Xenbase:XB-GENE-966533 Uniprot:B1WBD7
        Length = 840

 Score = 182 (69.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
 Identities = 43/120 (35%), Positives = 65/120 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KN+GN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:    99 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLVSE 154

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             LW          K +  + +       +  +   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   155 LW---------HKKRPSYVVPSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLHEELKE 205

 Score = 106 (42.4 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query:   141 SGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             SG K   E R +  S+IS++F G + S V C  C   S+T E F ++SLP+P  +
Sbjct:   357 SGGKKRSEVRYR--SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIPGKE 409


>UNIPROTKB|Q8TEY7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9606 "Homo sapiens" [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0030891 "VCB complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=TAS] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=IMP] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IMP] [GO:0008270 "zinc ion
            binding" evidence=IDA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IDA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0007411 "axon guidance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 EMBL:AF383172 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 GO:GO:0030891
            eggNOG:COG5560 HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848
            MEROPS:C19.037 CTD:23032 OMA:TMEEDKS EMBL:AF383173 EMBL:AB029020
            EMBL:AK022864 EMBL:BC016663 IPI:IPI00236901 IPI:IPI00377264
            IPI:IPI00402757 RefSeq:NP_055832.3 RefSeq:NP_963918.1
            RefSeq:NP_963920.1 UniGene:Hs.480597 PDB:2UZG PDBsum:2UZG
            ProteinModelPortal:Q8TEY7 SMR:Q8TEY7 DIP:DIP-48942N IntAct:Q8TEY7
            MINT:MINT-1370210 STRING:Q8TEY7 PhosphoSite:Q8TEY7 DMDM:116242838
            PaxDb:Q8TEY7 PRIDE:Q8TEY7 DNASU:23032 Ensembl:ENST00000357428
            Ensembl:ENST00000370792 Ensembl:ENST00000370793
            Ensembl:ENST00000370794 GeneID:23032 KEGG:hsa:23032 UCSC:uc001dhs.3
            UCSC:uc001dhw.3 GeneCards:GC01M078161 H-InvDB:HIX0159957
            HGNC:HGNC:20059 HPA:HPA005719 neXtProt:NX_Q8TEY7
            PharmGKB:PA134955343 InParanoid:Q8TEY7 PhylomeDB:Q8TEY7
            ChiTaRS:USP33 EvolutionaryTrace:Q8TEY7 GenomeRNAi:23032
            NextBio:44018 ArrayExpress:Q8TEY7 Bgee:Q8TEY7 CleanEx:HS_USP33
            Genevestigator:Q8TEY7 GermOnline:ENSG00000077254 Uniprot:Q8TEY7
        Length = 942

 Score = 184 (69.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 50/122 (40%), Positives = 66/122 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 236

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW   SR   P    V   L    K     +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   237 TELWH-KSR---PGSV-VPTTLFQGIKT----VNPTFRGYSQQDAQEFLRCLMDLLHEEL 287

Query:   139 KE 140
             KE
Sbjct:   288 KE 289

 Score = 105 (42.0 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:   151 KKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   469 KKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKE 513


>UNIPROTKB|E1BLZ0 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0090266 "regulation of mitotic cell
            cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
            GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834 OMA:AIKSQNY
            EMBL:DAAA02012807 IPI:IPI00703062 RefSeq:NP_001192766.1
            UniGene:Bt.36835 PRIDE:E1BLZ0 Ensembl:ENSBTAT00000026571
            GeneID:517022 KEGG:bta:517022 NextBio:20872356 Uniprot:E1BLZ0
        Length = 709

 Score = 168 (64.2 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 45/136 (33%), Positives = 68/136 (50%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   378 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYGQQDAQEFLCE 427

Query:   130 LIDTLHEDLKESGEKSWGEF----RKKNK---SIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D +  +L+ +G +S        RK  K   ++++ +F+GQL S V C  C   S+T E
Sbjct:   428 LLDKIQHELETTGTRSPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDSKSNTIE 487

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P    CS
Sbjct:   488 PFWDLSLEFPERYQCS 503

 Score = 118 (46.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 22/36 (61%), Positives = 29/36 (80%)

Query:    17 TVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             TV PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   264 TVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 299


>UNIPROTKB|F1P6Y2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:AAEX03004889
            Ensembl:ENSCAFT00000032445 Uniprot:F1P6Y2
        Length = 947

 Score = 184 (69.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 50/122 (40%), Positives = 66/122 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 236

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW   SR   P    V   L    K     +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   237 TELWH-KSR---PGSV-VPTTLFQGIKT----VNPTFRGYSQQDAQEFLRCLMDLLHEEL 287

Query:   139 KE 140
             KE
Sbjct:   288 KE 289

 Score = 105 (42.0 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:   151 KKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   472 KKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKE 516


>TAIR|locus:505006627 [details] [associations]
            symbol:UBP8 "ubiquitin-specific protease 8"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL589883 HSSP:P54578 eggNOG:COG5560 KO:K11835 EMBL:AK226691
            EMBL:AF302662 IPI:IPI00547490 IPI:IPI01019477 RefSeq:NP_568411.4
            RefSeq:NP_851052.4 UniGene:At.23027 ProteinModelPortal:Q9C585
            SMR:Q9C585 MEROPS:C19.A01 PaxDb:Q9C585 PRIDE:Q9C585 GeneID:832263
            KEGG:ath:AT5G22030 TAIR:At5g22030 InParanoid:Q9C585
            PhylomeDB:Q9C585 Genevestigator:Q9C585 Uniprot:Q9C585
        Length = 871

 Score = 261 (96.9 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 67/192 (34%), Positives = 100/192 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK-TSGKLAEEFQLIFN 79
             GLTGL+NLGNTC++NS LQCL++T  L ++F+ E+ + +         G++A  F  +  
Sbjct:   277 GLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLR 336

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LWA  +   +P+ FK K   + +F  +       F G+ Q DS E L  L+D LHEDL 
Sbjct:   337 SLWAPGASTVAPRTFKAK---LARFAPQ-------FSGFNQHDSQELLAFLLDGLHEDLN 386

Query:   140 -------------------ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                                E  ++ W     +N SII ++  GQ KST++C  C++ S  
Sbjct:   387 RVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVM 446

Query:   181 FEVFSNVSLPLP 192
             F+ F  +SLPLP
Sbjct:   447 FDPFMYLSLPLP 458


>UNIPROTKB|Q6NTR6 [details] [associations]
            symbol:usp44-a "Ubiquitin carboxyl-terminal hydrolase 44-A"
            species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
            "anaphase" evidence=ISS] [GO:0060564 "negative regulation of
            mitotic anaphase-promoting complex activity" evidence=ISS]
            [GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
            GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC068889
            RefSeq:NP_001084641.1 UniGene:Xl.6668 ProteinModelPortal:Q6NTR6
            GeneID:414600 KEGG:xla:414600 CTD:414600 Xenbase:XB-GENE-1014118
            Uniprot:Q6NTR6
        Length = 690

 Score = 159 (61.0 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
 Identities = 41/130 (31%), Positives = 67/130 (51%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   383 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 432

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D + ++L+ +G +       S  +  K+  ++++ +F+GQL S V C  C   S+T E
Sbjct:   433 LLDKVQQELETTGTRYPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLVCDHKSNTIE 492

Query:   183 VFSNVSLPLP 192
              F ++SL  P
Sbjct:   493 PFWDLSLEFP 502

 Score = 126 (49.4 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query:    17 TVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGK 69
             TV PG+TGL+NLGNTCY+NSILQ LS+    RE F+  +  ++     +  SGK
Sbjct:   268 TVTPGVTGLRNLGNTCYMNSILQILSHLHVFRECFLQLDLNQTQELLAAAGSGK 321


>UNIPROTKB|F1P4F0 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:AADN02026599
            EMBL:AADN02026598 IPI:IPI00581772 Ensembl:ENSGALT00000006585
            Uniprot:F1P4F0
        Length = 903

 Score = 182 (69.1 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 43/120 (35%), Positives = 65/120 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   138 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLVSE 193

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W          K +  + +       +  +   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   194 VW---------HKKRPSYVVPSSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKE 244

 Score = 105 (42.0 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 21/60 (35%), Positives = 38/60 (63%)

Query:   138 LKESGEKSWGEFRK--KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             LK++  ++ G+ +K  + +S+IS++F G + S V C  C   S+T E F ++SLP+P  +
Sbjct:   411 LKKAQMQASGKKKKELRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKE 470

 Score = 37 (18.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
 Identities = 16/65 (24%), Positives = 32/65 (49%)

Query:   136 EDLKESGEKSWG-EFRKKNKSIISELFYGQLKSTVICCNCQ----ETSSTFEVFSNVSLP 190
             ++LK  G+  +  E  KK ++ +      +L   ++C + +    E   +F++ S+VS P
Sbjct:   537 DELKAIGDNMYSCERCKKLRNGVKYCKVLRLPE-ILCIHLKRFRHEVMYSFKINSHVSFP 595

Query:   191 LPSND 195
             L   D
Sbjct:   596 LEGLD 600


>UNIPROTKB|E1BWB2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0044297
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11848 CTD:23032
            EMBL:AADN02012750 IPI:IPI00598742 RefSeq:XP_422389.2
            UniGene:Gga.26668 ProteinModelPortal:E1BWB2
            Ensembl:ENSGALT00000014598 GeneID:424553 KEGG:gga:424553
            NextBio:20826873 Uniprot:E1BWB2
        Length = 910

 Score = 183 (69.5 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 47/122 (38%), Positives = 65/122 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL  +F+           ++T  K  + + +  + 
Sbjct:   150 GLTGLKNIGNTCYMNAALQALSNCPPLTHFFLD------CGGLARTDKKPAICKSYLKLM 203

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW  +     P          G F + +  +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   204 TELWHKNR----PGSVVP----TGLF-QGIKSVNPTFRGYSQQDAQEFLRCLMDLLHEEL 254

Query:   139 KE 140
             KE
Sbjct:   255 KE 256

 Score = 104 (41.7 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query:   151 KKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             KK +S+IS++F G + S+V C  C   S T E F ++SLP+P  +
Sbjct:   437 KKYRSVISDIFDGTIISSVQCLTCDRLSVTLETFQDLSLPIPGKE 481


>RGD|1305621 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10116
            "Rattus norvegicus" [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA;ISO] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA;ISO] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA;ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA;ISO] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 RGD:1305621 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:CH474001 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ IPI:IPI00869542 RefSeq:NP_001101297.1
            Ensembl:ENSRNOT00000010786 GeneID:311856 KEGG:rno:311856
            UCSC:RGD:1305621 NextBio:664327 Uniprot:D3ZLQ8
        Length = 915

 Score = 181 (68.8 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 43/120 (35%), Positives = 65/120 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLISE 198

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W          K +  + +       +  +   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   199 VW---------HKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKE 249

 Score = 106 (42.4 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query:   138 LKESGEKSWGEFRKKN---KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             LK++   S G  R+K    +S+IS++F G + S V C  C   S+T E F ++SLP+P  
Sbjct:   424 LKKAQVPSTGGRRRKEQSYRSVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGK 483

Query:   195 D 195
             +
Sbjct:   484 E 484

 Score = 38 (18.4 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query:   176 ETSSTFEVFSNVSLPLPSND 195
             E   +F+V S+VS PL   D
Sbjct:   593 EVMYSFKVSSHVSFPLEGLD 612


>UNIPROTKB|Q5R5Z6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0004221 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:CR860704 RefSeq:NP_001126647.1
            UniGene:Pab.18678 ProteinModelPortal:Q5R5Z6 SMR:Q5R5Z6
            GeneID:100173645 KEGG:pon:100173645 InParanoid:Q5R5Z6
            Uniprot:Q5R5Z6
        Length = 913

 Score = 180 (68.4 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 43/120 (35%), Positives = 65/120 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   142 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLVSE 197

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W          K +  + +       +  +   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   198 VW---------HKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKE 248

 Score = 107 (42.7 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query:   138 LKESGEKSWGEFRKKN---KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             LK++   S G  R+K    +S+IS++F G + S V C  C   S+T E F ++SLP+P  
Sbjct:   422 LKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSATVETFQDLSLPIPGK 481

Query:   195 D 195
             +
Sbjct:   482 E 482

 Score = 36 (17.7 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query:   176 ETSSTFEVFSNVSLPLPSND 195
             E   +F++ S+VS PL   D
Sbjct:   591 EVMYSFKINSHVSFPLEGLD 610


>MGI|MGI:1921520 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISO] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 MGI:MGI:1921520
            GO:GO:0048471 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:CH466542
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 EMBL:AL844546 HSSP:Q93009 eggNOG:COG5560 CTD:10868
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            MEROPS:C19.025 EMBL:AF449715 EMBL:AK173083 EMBL:AK054279
            EMBL:AK163663 EMBL:BC079674 IPI:IPI00469997 RefSeq:NP_083122.1
            UniGene:Mm.346654 ProteinModelPortal:Q8C6M1 SMR:Q8C6M1
            PhosphoSite:Q8C6M1 PRIDE:Q8C6M1 Ensembl:ENSMUST00000102849
            Ensembl:ENSMUST00000170476 GeneID:74270 KEGG:mmu:74270
            UCSC:uc008jde.2 InParanoid:Q8C6M1 NextBio:340299 Bgee:Q8C6M1
            Genevestigator:Q8C6M1 Uniprot:Q8C6M1
        Length = 916

 Score = 181 (68.8 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 43/120 (35%), Positives = 65/120 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLISE 198

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W          K +  + +       +  +   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   199 VW---------HKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKE 249

 Score = 106 (42.4 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query:   138 LKESGEKSWGEFRKKN---KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             LK++   S G  R+K    +S+IS++F G + S V C  C   S+T E F ++SLP+P  
Sbjct:   425 LKKAQVPSTGGRRRKEQSYRSVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGK 484

Query:   195 D 195
             +
Sbjct:   485 E 485

 Score = 38 (18.4 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query:   176 ETSSTFEVFSNVSLPLPSND 195
             E   +F+V S+VS PL   D
Sbjct:   594 EVMYSFKVSSHVSFPLEGLD 613


>UNIPROTKB|Q9Y2K6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IDA] [GO:0070536
            "protein K63-linked deubiquitination" evidence=IDA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IMP] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IMP] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 EMBL:CH471090 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:AL158207 eggNOG:COG5560 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            EMBL:AY074877 EMBL:AB023220 EMBL:BC039593 EMBL:Y17457 EMBL:Y17459
            IPI:IPI00328285 RefSeq:NP_001008563.2 RefSeq:NP_001103773.2
            RefSeq:NP_006667.3 UniGene:Hs.5452 ProteinModelPortal:Q9Y2K6
            SMR:Q9Y2K6 IntAct:Q9Y2K6 STRING:Q9Y2K6 MEROPS:C19.025
            PhosphoSite:Q9Y2K6 DMDM:116242837 PRIDE:Q9Y2K6
            Ensembl:ENST00000315480 Ensembl:ENST00000358355
            Ensembl:ENST00000372429 GeneID:10868 KEGG:hsa:10868 UCSC:uc004byr.2
            GeneCards:GC09P132596 H-InvDB:HIX0008459 HGNC:HGNC:12619
            HPA:HPA006287 neXtProt:NX_Q9Y2K6 PharmGKB:PA37245 InParanoid:Q9Y2K6
            PhylomeDB:Q9Y2K6 ChiTaRS:USP20 GenomeRNAi:10868 NextBio:41265
            ArrayExpress:Q9Y2K6 Bgee:Q9Y2K6 CleanEx:HS_USP20
            Genevestigator:Q9Y2K6 GermOnline:ENSG00000136878 Uniprot:Q9Y2K6
        Length = 914

 Score = 180 (68.4 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 43/120 (35%), Positives = 65/120 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLVSE 198

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             +W          K +  + +       +  +   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   199 VW---------HKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKE 249

 Score = 107 (42.7 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query:   138 LKESGEKSWGEFRKKN---KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             LK++   S G  R+K    +S+IS++F G + S V C  C   S+T E F ++SLP+P  
Sbjct:   423 LKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGK 482

Query:   195 D 195
             +
Sbjct:   483 E 483

 Score = 36 (17.7 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query:   176 ETSSTFEVFSNVSLPLPSND 195
             E   +F++ S+VS PL   D
Sbjct:   592 EVMYSFKINSHVSFPLEGLD 611


>MGI|MGI:2685391 [details] [associations]
            symbol:Usp49 "ubiquitin specific peptidase 49" species:10090
            "Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 MGI:MGI:2685391 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 UniGene:Mm.59393
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000015084 KO:K11834
            MEROPS:C19.073 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK CTD:25862
            OMA:VRGQKQD EMBL:BC060712 IPI:IPI00420459 RefSeq:NP_940813.1
            ProteinModelPortal:Q6P9L4 SMR:Q6P9L4 STRING:Q6P9L4
            PhosphoSite:Q6P9L4 PRIDE:Q6P9L4 Ensembl:ENSMUST00000024779
            GeneID:224836 KEGG:mmu:224836 UCSC:uc008cvv.1 InParanoid:Q6P9L4
            NextBio:377415 Bgee:Q6P9L4 CleanEx:MM_USP49 Genevestigator:Q6P9L4
            GermOnline:ENSMUSG00000023984 Uniprot:Q6P9L4
        Length = 685

 Score = 161 (61.7 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   354 LCHELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 403

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+  + ++L+  G         S  +  K+   +++ +F+GQL S V C +C   S+T E
Sbjct:   404 LLHKVQQELESEGSTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIE 463

Query:   183 VFSNVSLPLPSNDYC 197
              F ++SL  P   +C
Sbjct:   464 PFWDLSLEFPERYHC 478

 Score = 123 (48.4 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NSILQ LS+    RE F+
Sbjct:   245 VAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFL 279


>RGD|1310513 [details] [associations]
            symbol:Usp49 "ubiquitin specific peptidase 49" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            RGD:1310513 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834
            OrthoDB:EOG4XGZZK CTD:25862 OMA:VRGQKQD EMBL:AC129162
            IPI:IPI00371730 RefSeq:NP_001129942.1 UniGene:Rn.147913
            Ensembl:ENSRNOT00000018550 GeneID:316211 KEGG:rno:316211
            UCSC:RGD:1310513 NextBio:670532 Uniprot:D3ZJ49
        Length = 685

 Score = 161 (61.7 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   354 LCHELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 403

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+  + ++L+  G         S  +  K+   +++ +F+GQL S V C +C   S+T E
Sbjct:   404 LLHKVQQELESEGSTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCVSCNYKSNTIE 463

Query:   183 VFSNVSLPLPSNDYC 197
              F ++SL  P   +C
Sbjct:   464 PFWDLSLEFPERYHC 478

 Score = 123 (48.4 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NSILQ LS+    RE F+
Sbjct:   245 VAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFL 279


>UNIPROTKB|I3LBG3 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
            [GO:0001664 "G-protein coupled receptor binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:CU459043
            Ensembl:ENSSSCT00000023659 Uniprot:I3LBG3
        Length = 918

 Score = 178 (67.7 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
 Identities = 47/121 (38%), Positives = 66/121 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q +   
Sbjct:   152 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLVTE 207

Query:    81 LWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
             +W      Y  P    + H +     + V  M   FRGY QQD+ EFL  L+D LHE+LK
Sbjct:   208 VWHRKRPSYVVPTS--LSHGI-----KLVNPM---FRGYAQQDTQEFLRCLMDQLHEELK 257

Query:   140 E 140
             E
Sbjct:   258 E 258

 Score = 109 (43.4 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query:   138 LKESGEKSWGEFRKKN---KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             LK++   S G  R+K    +S+IS++F G + S V C  C   S+T E F ++SLP+P  
Sbjct:   425 LKKAQVPSTGSRRRKEQQYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGK 484

Query:   195 D 195
             +
Sbjct:   485 E 485

 Score = 43 (20.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query:   136 EDLKESGEKSWG-EFRKKNKSIISELFYGQLKSTVICCNCQ----ETSSTFEVFSNVSLP 190
             ++LK  G+  +  E  KK ++ +      QL   ++C + +    E   +F++ S+VS P
Sbjct:   552 DELKAPGDNMYSCERCKKLRNGVKYCKVLQLPE-ILCIHLKRFRHEVMYSFKISSHVSFP 610

Query:   191 LPSND 195
             L   D
Sbjct:   611 LEGLD 615


>UNIPROTKB|Q5T3E1 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
            GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AL160163 EMBL:AL365205 HOGENOM:HOG000015084 HOVERGEN:HBG018027
            UniGene:Hs.665742 HGNC:HGNC:20078 IPI:IPI00639902 SMR:Q5T3E1
            STRING:Q5T3E1 Ensembl:ENST00000373010 Uniprot:Q5T3E1
        Length = 585

 Score = 160 (61.4 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   357 LCRELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 406

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+  + ++L+  G         S  +  K+   +++ +F+GQL S V C +C   S+T E
Sbjct:   407 LLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIE 466

Query:   183 VFSNVSLPLPSNDYC 197
              F ++SL  P   +C
Sbjct:   467 PFWDLSLEFPERYHC 481

 Score = 122 (48.0 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
 Identities = 26/53 (49%), Positives = 34/53 (64%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK-TSGK 69
             + PG+TGL+NLGNTCY+NSILQ LS+    RE F+          + K T+GK
Sbjct:   248 MAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSKTEHLFPKATNGK 300


>TAIR|locus:2037985 [details] [associations]
            symbol:UBP11 "AT1G32850" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC006424 HSSP:P40818 eggNOG:COG5560 HOGENOM:HOG000264375
            KO:K11835 ProtClustDB:CLSN2689389 IPI:IPI00534425 PIR:C86453
            RefSeq:NP_174562.2 UniGene:At.51891 ProteinModelPortal:Q9MAQ3
            SMR:Q9MAQ3 MEROPS:C19.A04 EnsemblPlants:AT1G32850.1 GeneID:840179
            KEGG:ath:AT1G32850 TAIR:At1g32850 InParanoid:Q9MAQ3 OMA:HCSASEC
            PhylomeDB:Q9MAQ3 Genevestigator:Q9MAQ3 Uniprot:Q9MAQ3
        Length = 892

 Score = 259 (96.2 bits), Expect = 4.3e-21, P = 4.3e-21
 Identities = 64/192 (33%), Positives = 101/192 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK-TSGKLAEEFQLIFN 79
             GL GL+NLGNTC++NS LQCL++T P+ EYF+ +++  + A       G+LA  F  +  
Sbjct:   299 GLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLR 358

Query:    80 MLWAGDSRYFSPQKFKVK-HELVGKFKEEVGKMKRTFRGYEQQDSHEFLTIL-----IDT 133
              LW+      +P+ FK K      +F        +    +     HE L  +     I+ 
Sbjct:   359 KLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEA 418

Query:   134 LHEDLK---ESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
                D +   E  E+ W   + +N S+I ++F GQ KST++C +C + S TF+ F  +SLP
Sbjct:   419 KDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLSLP 478

Query:   191 LPSNDYCSLRVS 202
             LPS+   S+ V+
Sbjct:   479 LPSSRTRSMTVT 490


>UNIPROTKB|E1BGQ9 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862
            OMA:VRGQKQD EMBL:DAAA02055061 IPI:IPI00716640 RefSeq:XP_002697284.1
            RefSeq:XP_595518.4 ProteinModelPortal:E1BGQ9
            Ensembl:ENSBTAT00000011820 GeneID:517349 KEGG:bta:517349
            NextBio:20872416 Uniprot:E1BGQ9
        Length = 683

 Score = 164 (62.8 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
 Identities = 47/156 (30%), Positives = 74/156 (47%)

Query:    53 TEFKRSMTAAYSKT-SGK---LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEV 108
             T   RS+    +K  S K   L  E   +F ++W+G     SP  F + H         V
Sbjct:   331 TSLSRSLELIQNKEPSSKHISLCHELHTLFRVMWSGKWALVSP--FAMLHS--------V 380

Query:   109 GKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESGEK-------SWGEFRKKNKSIISELF 161
               +   FRGY+QQD+ EFL  L+  + ++L+  G         S  +  K+   +++ +F
Sbjct:   381 WSLIPAFRGYDQQDAQEFLCELLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIF 440

Query:   162 YGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYC 197
             +GQL S V C +C   S+T E F ++SL  P   +C
Sbjct:   441 HGQLLSQVTCVSCNYKSNTIEPFWDLSLEFPERYHC 476

 Score = 119 (46.9 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
 Identities = 22/35 (62%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             + PG+TGL+NLGNTCY+NSILQ LS+    RE F+
Sbjct:   242 MAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFL 276


>UNIPROTKB|F1PD56 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0008277 "regulation
            of G-protein coupled receptor protein signaling pathway"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
            OMA:ADYGQIS EMBL:AAEX03006844 RefSeq:XP_537816.3
            Ensembl:ENSCAFT00000031793 GeneID:480696 KEGG:cfa:480696
            Uniprot:F1PD56
        Length = 915

 Score = 179 (68.1 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
 Identities = 47/121 (38%), Positives = 67/121 (55%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLVSE 198

Query:    81 LW-AGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
             +W      Y  P    + H +     + V  M   FRGY QQD+ EFL  L+D LHE+LK
Sbjct:   199 VWHRRRPSYVVPTS--LSHGI-----KLVNPM---FRGYAQQDTQEFLCCLMDQLHEELK 248

Query:   140 E 140
             E
Sbjct:   249 E 249

 Score = 107 (42.7 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query:   138 LKESGEKSWGEFRKKN---KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
             LK++   S G  R+K    +S+IS++F G + S V C  C   S+T E F ++SLP+P  
Sbjct:   424 LKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGK 483

Query:   195 D 195
             +
Sbjct:   484 E 484

 Score = 37 (18.1 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query:   176 ETSSTFEVFSNVSLPLPSND 195
             E   +F++ S+VS PL   D
Sbjct:   593 EVMYSFKISSHVSFPLEGLD 612


>UNIPROTKB|Q70CQ1 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0005737 EMBL:CH471081 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 EMBL:AL365205
            HOGENOM:HOG000015084 KO:K11834 MEROPS:C19.073 HOVERGEN:HBG018027
            OrthoDB:EOG4XGZZK EMBL:AJ586139 EMBL:BC014176 IPI:IPI00156871
            IPI:IPI00455818 RefSeq:NP_061031.2 UniGene:Hs.665742
            ProteinModelPortal:Q70CQ1 SMR:Q70CQ1 IntAct:Q70CQ1 STRING:Q70CQ1
            PhosphoSite:Q70CQ1 DMDM:52000871 PaxDb:Q70CQ1 PRIDE:Q70CQ1
            DNASU:25862 Ensembl:ENST00000297229 Ensembl:ENST00000373006
            Ensembl:ENST00000373009 Ensembl:ENST00000394253 GeneID:25862
            KEGG:hsa:25862 UCSC:uc003ori.3 CTD:25862 GeneCards:GC06M041762
            H-InvDB:HIX0164985 HGNC:HGNC:20078 HPA:HPA030254 HPA:HPA030255
            neXtProt:NX_Q70CQ1 PharmGKB:PA134954570 InParanoid:Q70CQ1
            OMA:VRGQKQD GenomeRNAi:25862 NextBio:47231 ArrayExpress:Q70CQ1
            Bgee:Q70CQ1 CleanEx:HS_USP49 Genevestigator:Q70CQ1
            GermOnline:ENSG00000164663 Uniprot:Q70CQ1
        Length = 688

 Score = 160 (61.4 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   357 LCRELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 406

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+  + ++L+  G         S  +  K+   +++ +F+GQL S V C +C   S+T E
Sbjct:   407 LLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIE 466

Query:   183 VFSNVSLPLPSNDYC 197
              F ++SL  P   +C
Sbjct:   467 PFWDLSLEFPERYHC 481

 Score = 122 (48.0 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
 Identities = 26/53 (49%), Positives = 34/53 (64%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK-TSGK 69
             + PG+TGL+NLGNTCY+NSILQ LS+    RE F+          + K T+GK
Sbjct:   248 MAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSKTEHLFPKATNGK 300


>ZFIN|ZDB-GENE-050208-484 [details] [associations]
            symbol:usp49 "ubiquitin specific peptidase 49"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            ZFIN:ZDB-GENE-050208-484 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5077 EMBL:AL645789 GeneTree:ENSGT00690000101718
            HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
            CTD:25862 OMA:VRGQKQD EMBL:BC171546 EMBL:BC171548 IPI:IPI00503837
            RefSeq:NP_001038361.1 UniGene:Dr.13979 Ensembl:ENSDART00000037069
            GeneID:559473 KEGG:dre:559473 InParanoid:Q1MTK1 NextBio:20882985
            Uniprot:Q1MTK1
        Length = 649

 Score = 156 (60.0 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
 Identities = 43/136 (31%), Positives = 67/136 (49%)

Query:    64 SKTSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDS 123
             S+    L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+
Sbjct:   343 SRQQVSLCHELHTLFRVMWSGRWSLVSP--FAMLHS--------VWNLIPAFRGYDQQDA 392

Query:   124 HEFLTILIDTLHEDLKESGEKSWGEF----RKKNKSIISEL---FYGQLKSTVICCNCQE 176
              EFL  L+D + ++L+    +         RK +K ++  L   F+GQL S V C +C+ 
Sbjct:   393 QEFLCELLDKVQQELESDAPRKHFLIPITQRKLSKQVLKVLNTIFHGQLLSQVTCLSCKR 452

Query:   177 TSSTFEVFSNVSLPLP 192
              S+T E F ++SL  P
Sbjct:   453 KSNTVEPFWDLSLEFP 468

 Score = 125 (49.1 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT 53
             + PG+TGL+NLGNTCY+NSILQ LS+    RE F+T
Sbjct:   260 LAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLT 295


>UNIPROTKB|E2R0T7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 EMBL:AAEX03009951
            Ensembl:ENSCAFT00000010306 Uniprot:E2R0T7
        Length = 668

 Score = 168 (64.2 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
 Identities = 43/136 (31%), Positives = 68/136 (50%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   380 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 429

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D +  +L+ +G +       S  +  K+  ++++ +F+GQL S V C  C   S+T E
Sbjct:   430 LLDKIQHELETTGTRLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIE 489

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P    CS
Sbjct:   490 PFWDLSLEFPERYQCS 505

 Score = 113 (44.8 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   267 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 301


>UNIPROTKB|I3LA47 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0090266 "regulation of mitotic cell
            cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
            GeneTree:ENSGT00690000101718 KO:K11834 OMA:AIKSQNY EMBL:FP340372
            RefSeq:XP_003126758.2 Ensembl:ENSSSCT00000025589 GeneID:100516911
            KEGG:ssc:100516911 Uniprot:I3LA47
        Length = 709

 Score = 168 (64.2 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
 Identities = 43/136 (31%), Positives = 68/136 (50%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   378 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 427

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D +  +L+ +G +       S  +  K+  ++++ +F+GQL S V C  C   S+T E
Sbjct:   428 LLDKIQHELETTGTRLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIE 487

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P    CS
Sbjct:   488 PFWDLSLEFPERYQCS 503

 Score = 113 (44.8 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   265 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 299


>UNIPROTKB|E2R0W7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0090266 "regulation of
            mitotic cell cycle spindle assembly checkpoint" evidence=IEA]
            [GO:0060564 "negative regulation of mitotic anaphase-promoting
            complex activity" evidence=IEA] [GO:0051322 "anaphase"
            evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
            OMA:AIKSQNY EMBL:AAEX03009951 RefSeq:XP_532654.1
            ProteinModelPortal:E2R0W7 Ensembl:ENSCAFT00000010298 GeneID:475430
            KEGG:cfa:475430 NextBio:20851273 Uniprot:E2R0W7
        Length = 711

 Score = 168 (64.2 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
 Identities = 43/136 (31%), Positives = 68/136 (50%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   380 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 429

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D +  +L+ +G +       S  +  K+  ++++ +F+GQL S V C  C   S+T E
Sbjct:   430 LLDKIQHELETTGTRLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIE 489

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P    CS
Sbjct:   490 PFWDLSLEFPERYQCS 505

 Score = 113 (44.8 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   267 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 301


>MGI|MGI:3045318 [details] [associations]
            symbol:Usp44 "ubiquitin specific peptidase 44" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0051301 "cell division" evidence=IEA] [GO:0051322 "anaphase"
            evidence=ISO] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=ISO] [GO:0090231
            "regulation of spindle checkpoint" evidence=ISO] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50271
            MGI:MGI:3045318 GO:GO:0005634 GO:GO:0043161 GO:GO:0051301
            GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0090266 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0051322 GO:GO:0060564 CTD:84101
            HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
            EMBL:AK088109 EMBL:CJ236846 EMBL:AC124686 EMBL:BC111886
            IPI:IPI00224757 RefSeq:NP_001193780.1 UniGene:Mm.276331
            ProteinModelPortal:Q8C2S0 SMR:Q8C2S0 STRING:Q8C2S0
            PhosphoSite:Q8C2S0 GeneID:327799 KEGG:mmu:327799 UCSC:uc011xlw.1
            eggNOG:KOG1867 InParanoid:Q8C2S0 NextBio:397964 Bgee:Q8C2S0
            Genevestigator:Q8C2S0 Uniprot:Q8C2S0
        Length = 711

 Score = 168 (64.2 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
 Identities = 43/142 (30%), Positives = 68/142 (47%)

Query:    64 SKTSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDS 123
             S     L  E  ++F ++W+G+    SP  F + H         V ++   FRGY QQD+
Sbjct:   374 SSPYSSLCHELHILFQVMWSGEWALVSP--FAMLHS--------VWRLIPAFRGYAQQDA 423

Query:   124 HEFLTILIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQE 176
              EFL  L+D +  +L+ +G K       S     ++  ++++ +F+GQ  S V C  C  
Sbjct:   424 QEFLCELLDKIQRELETTGTKLPALIPTSQRRLIEQVLNVVNNIFHGQFLSQVTCLACDN 483

Query:   177 TSSTFEVFSNVSLPLPSNDYCS 198
              S T E F ++SL  P    CS
Sbjct:   484 KSDTIESFWDLSLEFPERYQCS 505

 Score = 113 (44.8 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   267 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 301


>UNIPROTKB|E2RP15 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 OMA:VRGQKQD
            EMBL:AAEX03008323 RefSeq:XP_532134.3 Ensembl:ENSCAFT00000002525
            GeneID:474899 KEGG:cfa:474899 NextBio:20850836 Uniprot:E2RP15
        Length = 681

 Score = 160 (61.4 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   350 LCHELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 399

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+  + ++L+  G         S  +  K+   +++ +F+GQL S V C +C   S+T E
Sbjct:   400 LLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIE 459

Query:   183 VFSNVSLPLPSNDYC 197
              F ++SL  P   +C
Sbjct:   460 PFWDLSLEFPERYHC 474

 Score = 120 (47.3 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
 Identities = 22/35 (62%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             + PG+TGL+NLGNTCY+NSILQ LS+    RE F+
Sbjct:   242 MAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFL 276


>UNIPROTKB|I3LRM6 [details] [associations]
            symbol:I3LRM6 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:VRGQKQD EMBL:CU468691
            Ensembl:ENSSSCT00000023974 Uniprot:I3LRM6
        Length = 628

 Score = 160 (61.4 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   326 LCHELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 375

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+  + ++L+  G         S  +  K+   +++ +F+GQL S V C +C   S+T E
Sbjct:   376 LLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIE 435

Query:   183 VFSNVSLPLPSNDYC 197
              F ++SL  P   +C
Sbjct:   436 PFWDLSLEFPERYHC 450

 Score = 119 (46.9 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
 Identities = 22/35 (62%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             + PG+TGL+NLGNTCY+NSILQ LS+    RE F+
Sbjct:   237 MAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFL 271


>UNIPROTKB|Q70EL3 [details] [associations]
            symbol:USP50 "Inactive ubiquitin carboxyl-terminal
            hydrolase 50" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000231498 EMBL:AJ583818
            EMBL:BN000339 IPI:IPI00940487 UniGene:Hs.677758
            ProteinModelPortal:Q70EL3 SMR:Q70EL3 IntAct:Q70EL3 STRING:Q70EL3
            MEROPS:C19.058 PhosphoSite:Q70EL3 DMDM:74723115 PaxDb:Q70EL3
            PRIDE:Q70EL3 UCSC:uc021skx.1 GeneCards:GC15M050792
            H-InvDB:HIX0038100 HGNC:HGNC:20079 HPA:HPA039470 neXtProt:NX_Q70EL3
            HOVERGEN:HBG098592 InParanoid:Q70EL3 OrthoDB:EOG4JM7PX
            NextBio:100122 CleanEx:HS_USP50 Genevestigator:Q70EL3
            Uniprot:Q70EL3
        Length = 339

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 70/194 (36%), Positives = 102/194 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTS--GKLAEEFQLIF 78
             G+TGL NLGNTC +N+I QCL +  PL EYF+T    +    +   S   ++A  F  + 
Sbjct:    42 GVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQKFLLPSDCSEVATAFAYLM 101

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               +W GDS   SP       E+   F   +G +   F    QQD+ EFL  +++ LHE L
Sbjct:   102 TDMWLGDSDCVSP-------EI---FWSALGNLYPAFTKKMQQDAQEFLICVLNELHEAL 151

Query:   139 KE---SGEKSWGE------FRK---KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSN 186
             K+   S  +S+ +       RK      SII++LF  QL  +++C  C++ +   EVF+ 
Sbjct:   152 KKYHYSRRRSYEKGSTQRCCRKWITTETSIITQLFEEQLNYSIVCLKCEKCTYKNEVFTV 211

Query:   187 VSLPLPSNDYCSLR 200
              SLP+PS   CSLR
Sbjct:   212 FSLPIPSKYECSLR 225


>CGD|CAL0000531 [details] [associations]
            symbol:orf19.6260 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 CGD:CAL0000531 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 EMBL:AACQ01000037 KO:K11835 MEROPS:C19.103
            RefSeq:XP_718847.1 ProteinModelPortal:Q5AAY9 STRING:Q5AAY9
            GeneID:3639521 KEGG:cal:CaO19.6260 Uniprot:Q5AAY9
        Length = 1372

 Score = 171 (65.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 46/134 (34%), Positives = 65/134 (48%)

Query:    19 GPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKT-SGKLAEEFQL 76
             G G  GL N+GNTCY+NS LQCL +   +  YF    +K+ +         G +A  F  
Sbjct:   323 GGGHLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGYHGDVANAFGS 382

Query:    77 IFNMLW--AGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
             +    +    +S   SP++FK            +G+    F GY QQDS E L+ L+D L
Sbjct:   383 LLKQAFDHVKNSSSISPREFK----------STIGRYSSMFSGYLQQDSQELLSWLLDAL 432

Query:   135 HEDLKESGEKSWGE 148
             HEDL    +K + E
Sbjct:   433 HEDLNRIHQKPYCE 446

 Score = 116 (45.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 20/47 (42%), Positives = 34/47 (72%)

Query:   146 WGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLP 192
             W + + +N S+I +LF G  +ST+IC +C + S TF+ F++++LPLP
Sbjct:   469 WNQHKARNDSVIIDLFTGLYQSTLICPDCGKKSITFDPFNDLTLPLP 515

 Score = 40 (19.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:   124 HEFLTILIDTLHEDLKE 140
             HEFL + ID    DLK+
Sbjct:    87 HEFLNLPIDNF-SDLKD 102

 Score = 36 (17.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query:   179 STFEVFSNVSLPLPS 193
             S F+  SN+ LP PS
Sbjct:   912 SLFDSTSNLPLPPPS 926


>UNIPROTKB|F1RUW2 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 EMBL:CU914409
            RefSeq:XP_003128438.3 Ensembl:ENSSSCT00000001812 GeneID:100520499
            KEGG:ssc:100520499 OMA:INCKISE Uniprot:F1RUW2
        Length = 682

 Score = 160 (61.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V  +   FRGY+QQD+ EFL  
Sbjct:   351 LCHELHTLFRVMWSGKWALVSP--FAMLHS--------VWSLIPAFRGYDQQDAQEFLCE 400

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+  + ++L+  G         S  +  K+   +++ +F+GQL S V C +C   S+T E
Sbjct:   401 LLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIE 460

Query:   183 VFSNVSLPLPSNDYC 197
              F ++SL  P   +C
Sbjct:   461 PFWDLSLEFPERYHC 475

 Score = 119 (46.9 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
 Identities = 22/35 (62%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             + PG+TGL+NLGNTCY+NSILQ LS+    RE F+
Sbjct:   242 MAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFL 276


>UNIPROTKB|Q9H0E7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
            division" evidence=IEA] [GO:0051322 "anaphase" evidence=IMP]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=IMP] [GO:0090231 "regulation of spindle
            checkpoint" evidence=IMP] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0090266 "regulation of mitotic cell cycle spindle assembly
            checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5077 GO:GO:0051322 GO:GO:0060564 CTD:84101
            HOGENOM:HOG000015084 KO:K11834 OMA:AIKSQNY HOVERGEN:HBG018027
            EMBL:AL136825 EMBL:AK315697 EMBL:AC018475 EMBL:BC030704
            IPI:IPI00030306 RefSeq:NP_001035862.1 RefSeq:NP_115523.2
            UniGene:Hs.646421 ProteinModelPortal:Q9H0E7 SMR:Q9H0E7
            IntAct:Q9H0E7 STRING:Q9H0E7 MEROPS:C19.057 PhosphoSite:Q9H0E7
            DMDM:300669621 PaxDb:Q9H0E7 PRIDE:Q9H0E7 DNASU:84101
            Ensembl:ENST00000258499 Ensembl:ENST00000393091
            Ensembl:ENST00000537435 GeneID:84101 KEGG:hsa:84101 UCSC:uc001teg.3
            GeneCards:GC12M095910 H-InvDB:HIX0010895 HGNC:HGNC:20064
            HPA:HPA026543 MIM:610993 neXtProt:NX_Q9H0E7 PharmGKB:PA134931457
            InParanoid:Q9H0E7 OrthoDB:EOG4XGZZK PhylomeDB:Q9H0E7
            GenomeRNAi:84101 NextBio:73349 ArrayExpress:Q9H0E7 Bgee:Q9H0E7
            CleanEx:HS_USP44 Genevestigator:Q9H0E7 GermOnline:ENSG00000136014
            Uniprot:Q9H0E7
        Length = 712

 Score = 166 (63.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
 Identities = 43/136 (31%), Positives = 67/136 (49%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   381 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 430

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D +  +L+ +G         S  +  K+  ++++ +F+GQL S V C  C   S+T E
Sbjct:   431 LLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIE 490

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P    CS
Sbjct:   491 PFWDLSLEFPERYQCS 506

 Score = 113 (44.8 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   268 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 302


>UNIPROTKB|Q5XGZ2 [details] [associations]
            symbol:usp44-b "Ubiquitin carboxyl-terminal hydrolase 44-B"
            species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
            "anaphase" evidence=ISS] [GO:0060564 "negative regulation of
            mitotic anaphase-promoting complex activity" evidence=ISS]
            [GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
            GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC084285
            RefSeq:NP_001088277.1 UniGene:Xl.49566 ProteinModelPortal:Q5XGZ2
            GeneID:495110 KEGG:xla:495110 CTD:495110 Xenbase:XB-GENE-6254317
            Uniprot:Q5XGZ2
        Length = 690

 Score = 152 (58.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 40/136 (29%), Positives = 68/136 (50%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   F GY QQD+ EFL  
Sbjct:   383 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFHGYAQQDAQEFLCE 432

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D + ++L+ +G +       S  +  ++  ++++ +F+GQL S V C  C   S+T E
Sbjct:   433 LLDKVQQELETTGTRYPALIPTSQRKLIRQVLNVVNNIFHGQLLSQVTCLVCDHKSNTIE 492

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P   + S
Sbjct:   493 PFWDLSLEFPERYHFS 508

 Score = 126 (49.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query:    17 TVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGK 69
             TV PG+TGL+NLGNTCY+NSILQ LS+    RE F+  +  ++     +  SGK
Sbjct:   268 TVTPGVTGLRNLGNTCYMNSILQILSHLHVFRECFLQLDLNQTQELLAADGSGK 321


>UNIPROTKB|D2HBJ8 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9646 "Ailuropoda melanoleuca" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=ISS] [GO:0051322 "anaphase"
            evidence=ISS] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=ISS] [GO:0090231
            "regulation of spindle checkpoint" evidence=ISS] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0051322 GO:GO:0060564 GeneTree:ENSGT00690000101718
            EMBL:GL192660 RefSeq:XP_002919284.1 Ensembl:ENSAMET00000002387
            GeneID:100470180 KEGG:aml:100470180 CTD:84101 HOGENOM:HOG000015084
            KO:K11834 OMA:AIKSQNY Uniprot:D2HBJ8
        Length = 711

 Score = 165 (63.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 42/136 (30%), Positives = 68/136 (50%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   380 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 429

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D +  +L+ +G +       S  +  K+  ++++ +F+GQL S V C  C   S+T E
Sbjct:   430 LLDKIQHELETTGTRLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIE 489

Query:   183 VFSNVSLPLPSNDYCS 198
              F ++SL  P    C+
Sbjct:   490 PFWDLSLEFPERYQCN 505

 Score = 113 (44.8 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   267 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 301


>POMBASE|SPCC1494.05c [details] [associations]
            symbol:ubp12 "CSN-associated deubiquitinating enzyme
            Ubp12" species:4896 "Schizosaccharomyces pombe" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISM] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 PomBase:SPCC1494.05c
            GO:GO:0005829 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 KO:K11835 PIR:T41006 RefSeq:NP_588530.1
            ProteinModelPortal:O60079 STRING:O60079 MEROPS:C19.A64
            EnsemblFungi:SPCC1494.05c.1 GeneID:2538990 KEGG:spo:SPCC1494.05c
            OMA:HERVENK OrthoDB:EOG4FR40X NextBio:20800165 Uniprot:O60079
        Length = 979

 Score = 253 (94.1 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 65/201 (32%), Positives = 103/201 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSK-TSGKLAEEFQLI 77
             PG  GL NLGNTCY+NS LQCL++T  LR++F + E+K  +  +      G++A  F  +
Sbjct:   308 PGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPLGMGGQVASIFASL 367

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEV---GKM-KRTFRGYEQQDSHEFLTI---- 129
                L++ +   F+P++FK     +GKF       G+   + F  +     HE L      
Sbjct:   368 IKSLYSPEHSSFAPRQFKAT---IGKFNHSFLGYGQQDSQEFLAFLLDGLHEDLNRIYQK 424

Query:   130 -------LIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
                    L +   E +K + E+ W   + +N S+I +LF G  +ST++C  C   S TF+
Sbjct:   425 PYTSKPDLYEVDEEKIKNTAEECWRLHKLRNDSLIVDLFQGMYRSTLVCPVCNTVSITFD 484

Query:   183 VFSNVSLPLPSNDYCSLRVSF 203
              F +++LPLP     S  V+F
Sbjct:   485 PFMDLTLPLPVKQVWSHTVTF 505


>ZFIN|ZDB-GENE-040426-1219 [details] [associations]
            symbol:usp20 "ubiquitin specific protease 20"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS] [GO:0021551
            "central nervous system morphogenesis" evidence=IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-040426-1219
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 GO:GO:0021551
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:BX927184
            IPI:IPI00920034 Ensembl:ENSDART00000006021 ArrayExpress:F1QTS8
            Bgee:F1QTS8 Uniprot:F1QTS8
        Length = 913

 Score = 180 (68.4 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
 Identities = 47/120 (39%), Positives = 66/120 (55%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KN+GN+CY+N+ LQ LSN  PL ++F  +    +     K +  L + +Q + + 
Sbjct:   146 GLTGMKNIGNSCYMNAALQALSNCPPLTQFF--QDCSGLVRTDKKPA--LCKSYQKLISE 201

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             LW     +     + V   L    K  V  M   FRGY QQD+ EFL  L+D LHE+LKE
Sbjct:   202 LW-----HKKRPSYVVPTTLFHGIKL-VNPM---FRGYAQQDTQEFLRCLMDQLHEELKE 252

 Score = 99 (39.9 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query:   154 KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             +S+IS++F G + S V C  C   S+T E F ++SLP+P  +
Sbjct:   442 RSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKE 483

 Score = 36 (17.7 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query:   176 ETSSTFEVFSNVSLPLPSND 195
             E   +F++ S+VS PL   D
Sbjct:   592 EVMYSFKINSHVSFPLEGLD 611


>UNIPROTKB|A7Z056 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISS] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0006897 "endocytosis"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            EMBL:BC153254 IPI:IPI00700030 RefSeq:NP_001098803.1
            UniGene:Bt.26746 ProteinModelPortal:A7Z056 SMR:A7Z056 STRING:A7Z056
            PRIDE:A7Z056 Ensembl:ENSBTAT00000027070 GeneID:505839
            KEGG:bta:505839 CTD:10868 GeneTree:ENSGT00690000101718
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 InParanoid:A7Z056 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ NextBio:20867329 ArrayExpress:A7Z056
            Uniprot:A7Z056
        Length = 912

 Score = 179 (68.1 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
 Identities = 47/121 (38%), Positives = 67/121 (55%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GLTG+KNLGN+CY+N+ LQ LSN  PL ++F+      +     K +  L + +Q + + 
Sbjct:   143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE--CGGLVRTDKKPA--LCKSYQKLVSE 198

Query:    81 LWAGDS-RYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
             +W      Y  P    + H +     + V  M   FRGY QQD+ EFL  L+D LHE+LK
Sbjct:   199 VWHRKRPSYVVPTS--LSHGI-----KLVNPM---FRGYAQQDTQEFLRCLMDQLHEELK 248

Query:   140 E 140
             E
Sbjct:   249 E 249

 Score = 100 (40.3 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query:   147 GEFRKKN---KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             G  R+K    +S+IS++F G + S V C  C   S+T E F ++SLP+P  +
Sbjct:   430 GSRRRKEQSYRSVISDIFDGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKE 481

 Score = 37 (18.1 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query:   176 ETSSTFEVFSNVSLPLPSND 195
             E   +F++ S+VS PL   D
Sbjct:   590 EVMYSFKISSHVSFPLEGLD 609


>TAIR|locus:2058490 [details] [associations]
            symbol:UBP5 "ubiquitin-specific protease 5" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA;TAS] [GO:0000956 "nuclear-transcribed mRNA catabolic
            process" evidence=RCA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:AC002409 eggNOG:COG5560
            HOGENOM:HOG000264375 KO:K11835 EMBL:AF048705 EMBL:AY099701
            EMBL:BT000300 IPI:IPI00536303 PIR:T00757 RefSeq:NP_565944.1
            UniGene:At.12368 ProteinModelPortal:O22207 SMR:O22207 IntAct:O22207
            MEROPS:C19.093 PaxDb:O22207 PRIDE:O22207 EnsemblPlants:AT2G40930.1
            GeneID:818691 KEGG:ath:AT2G40930 GeneFarm:4913 TAIR:At2g40930
            InParanoid:O22207 OMA:ADEYWAN PhylomeDB:O22207
            ProtClustDB:CLSN2688853 Genevestigator:O22207 GermOnline:AT2G40930
            Uniprot:O22207
        Length = 924

 Score = 251 (93.4 bits), Expect = 3.3e-20, P = 3.3e-20
 Identities = 69/202 (34%), Positives = 99/202 (49%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTS-GKLAEEFQLIFN 79
             GLTGL NLGNTC++NS +QCL +T     YF  ++ + +         G+LA  F  +  
Sbjct:   315 GLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLR 374

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL- 138
              LWA      +P+ FK K   + +F  +       F GY Q DS E L  L+D LHEDL 
Sbjct:   375 KLWAPGRTPIAPRPFKAK---LARFAPQ-------FSGYNQHDSQELLAFLLDGLHEDLN 424

Query:   139 ------------------KESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
                               +E  ++ W     +N SII ++  GQ KST++C  C + S T
Sbjct:   425 RVKHKPYINSRDADGRPDEEVADEFWKNHIARNDSIIVDVCQGQYKSTLVCPICNKVSVT 484

Query:   181 FEVFSNVSLPLPSNDYCSLRVS 202
             F+ F  +SLPL  N   ++ V+
Sbjct:   485 FDPFMYLSLPLQFNTTRAITVT 506


>UNIPROTKB|F1NZV6 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            InterPro:IPR001125 InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13202 PRINTS:PR00450
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 GO:GO:0004221 OMA:SDNNNQC
            GeneTree:ENSGT00680000099843 EMBL:AADN02025765 IPI:IPI00580446
            Ensembl:ENSGALT00000008580 Uniprot:F1NZV6
        Length = 1601

 Score = 251 (93.4 bits), Expect = 7.0e-20, P = 7.0e-20
 Identities = 62/194 (31%), Positives = 102/194 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL  YF++    ++ + T       G +A+ +  +
Sbjct:   721 GATGLSNLGNTCFMNSSIQCVSNTQPLTRYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 779

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
                LW+G  +  +P K +    +   +F     +  +    +     HE L  + D  + 
Sbjct:   780 VQELWSGTQKNIAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHDKPYV 839

Query:   137 DLKES-GE-------KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
             +LK+S G        ++W    ++N+SI+ +LF+GQLKS V C  C   S  F+ F+ +S
Sbjct:   840 ELKDSDGRPDWEVAAEAWENHLRRNRSIVVDLFHGQLKSQVKCKTCGHISVRFDPFNFLS 899

Query:   189 LPLPSNDYCSLRVS 202
             LPLP + Y  L ++
Sbjct:   900 LPLPMDSYMHLEIT 913


>UNIPROTKB|P35125 [details] [associations]
            symbol:USP6 "Ubiquitin carboxyl-terminal hydrolase 6"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006464 "cellular protein modification
            process" evidence=NAS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=TAS] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0060627 "regulation of vesicle-mediated
            transport" evidence=IDA] [GO:0055037 "recycling endosome"
            evidence=IDA] [GO:0005516 "calmodulin binding" evidence=IPI]
            [GO:0003676 "nucleic acid binding" evidence=TAS] [GO:0005764
            "lysosome" evidence=TAS] InterPro:IPR000195 InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF00566 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50086 PROSITE:PS50235 SMART:SM00164
            GO:GO:0005886 GO:GO:0060627 GO:GO:0003676 GO:GO:0005764
            GO:GO:0055037 Pathway_Interaction_DB:arf6cyclingpathway
            GO:GO:0006511 eggNOG:COG5210 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0005097 GO:GO:0032851
            SUPFAM:SSF47923 KO:K11837 EMBL:X63546 EMBL:X63547 EMBL:AY143550
            EMBL:AY163314 IPI:IPI00423562 IPI:IPI00423563 IPI:IPI00423565
            PIR:S57867 PIR:S57868 PIR:S57874 RefSeq:NP_004496.2
            UniGene:Hs.448851 ProteinModelPortal:P35125 SMR:P35125
            IntAct:P35125 MINT:MINT-2865848 STRING:P35125 MEROPS:C19.009
            PhosphoSite:P35125 DMDM:50403738 PaxDb:P35125 PRIDE:P35125
            DNASU:9098 Ensembl:ENST00000250066 Ensembl:ENST00000304328
            Ensembl:ENST00000332776 Ensembl:ENST00000572949
            Ensembl:ENST00000574788 GeneID:9098 KEGG:hsa:9098 UCSC:uc002gau.1
            UCSC:uc010ckz.1 CTD:9098 GeneCards:GC17P005019 H-InvDB:HIX0202554
            HGNC:HGNC:12629 HPA:HPA011742 MIM:604334 neXtProt:NX_P35125
            PharmGKB:PA37254 HOGENOM:HOG000154762 InParanoid:P35125 OMA:LAEVHDS
            OrthoDB:EOG469QSX PhylomeDB:P35125 ChiTaRS:USP6 GenomeRNAi:9098
            NextBio:34099 ArrayExpress:P35125 Bgee:P35125 CleanEx:HS_USP6
            Genevestigator:P35125 GermOnline:ENSG00000129204 Uniprot:P35125
        Length = 1406

 Score = 250 (93.1 bits), Expect = 7.6e-20, P = 7.6e-20
 Identities = 62/194 (31%), Positives = 103/194 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL +YF++    ++ + T       G +A+ +  +
Sbjct:   530 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 588

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
                LW+G  +  +P K +    +   KF     +  +    +     HE L  + +  + 
Sbjct:   589 VQELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYV 648

Query:   137 DLKES-GE-------KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
             +LK+S G        ++W    ++N+SII +LF+GQL+S V C  C   S  F+ F+ +S
Sbjct:   649 ELKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLS 708

Query:   189 LPLPSNDYCSLRVS 202
             LPLP + Y  L ++
Sbjct:   709 LPLPMDSYMDLEIT 722


>SGD|S000000946 [details] [associations]
            symbol:UBP5 "Putative ubiquitin-specific protease"
            species:4932 "Saccharomyces cerevisiae" [GO:0004843
            "ubiquitin-specific protease activity" evidence=TAS] [GO:0016579
            "protein deubiquitination" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0000131
            "incipient cellular bud site" evidence=IDA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0005935 "cellular bud neck" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 SGD:S000000946 Pfam:PF00581
            GO:GO:0005935 EMBL:BK006939 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0000131 EMBL:U18917
            eggNOG:COG5533 KO:K11839 RefSeq:NP_011071.3 GeneID:856887
            KEGG:sce:YER144C KO:K03120 RefSeq:NP_011075.3 GeneID:856891
            KEGG:sce:YER148W GeneTree:ENSGT00670000097591 OrthoDB:EOG4HX88F
            HOGENOM:HOG000248489 EMBL:U10082 PIR:S50277
            ProteinModelPortal:P39944 SMR:P39944 DIP:DIP-1716N IntAct:P39944
            MINT:MINT-409937 STRING:P39944 MEROPS:C19.006 EnsemblFungi:YER144C
            CYGD:YER144c NextBio:983284 Genevestigator:P39944
            GermOnline:YER144C Uniprot:P39944
        Length = 805

 Score = 167 (63.8 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
 Identities = 42/125 (33%), Positives = 64/125 (51%)

Query:    22 LTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTS-GKLAEEFQLIFN 79
             + GL+N+GN CY+N ILQCL  T  L   F+   +   +    S+ S G LA+ F ++ N
Sbjct:   445 IVGLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYLNFINFDSSRGSKGLLAKNFAILVN 504

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              +    +  F+P   +       +FK+  G +   +    QQD  EF   L+D LHEDL 
Sbjct:   505 NMHRHGA--FTPPNVRTIPVQTIQFKKICGHINPMYSDSMQQDCQEFCQFLLDGLHEDLN 562

Query:   140 ESGEK 144
             ++G K
Sbjct:   563 QNGSK 567

 Score = 104 (41.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query:   138 LKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYC 197
             ++++    W  F   + S I +LF GQ  S + C  C+ TS+T++ FS +S+P+P    C
Sbjct:   586 IRKASALEWERFLLTDFSAIIDLFQGQYASRLQCQVCEHTSTTYQTFSVLSVPVPRVKTC 645

Query:   198 SL 199
             ++
Sbjct:   646 NI 647


>FB|FBgn0031187 [details] [associations]
            symbol:CG14619 species:7227 "Drosophila melanogaster"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014298 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 KO:K11833
            GeneTree:ENSGT00670000098024 UniGene:Dm.1945 MEROPS:C19.A24
            GeneID:33132 KEGG:dme:Dmel_CG14619 UCSC:CG14619-RA
            FlyBase:FBgn0031187 GenomeRNAi:33132 NextBio:782065 EMBL:BT003648
            EMBL:BT100212 RefSeq:NP_001245799.1 RefSeq:NP_001245800.1
            RefSeq:NP_728455.1 SMR:Q8IQ27 EnsemblMetazoa:FBtr0077349
            EnsemblMetazoa:FBtr0309238 EnsemblMetazoa:FBtr0309239
            InParanoid:Q8IQ27 Uniprot:Q8IQ27
        Length = 938

 Score = 245 (91.3 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 60/189 (31%), Positives = 100/189 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSM--TAAYSKTSGKLAEEFQLIF 78
             GL GL+N+GNTC++NS++QCLS+T  L     T F RS   + + S    ++  EF  + 
Sbjct:   611 GLCGLRNIGNTCFMNSVIQCLSHTQEL-----TRFLRSHHGSRSLSTKDQQILHEFAKLI 665

Query:    79 NMLWAGDSRYFSPQK----FKVKHELVGKF-KEEVGKMKRTFRGYEQQDSHEFL---TIL 130
               +W  +    +P +    F  KH +   + +++  +  R F        +  +   T+ 
Sbjct:   666 QEMWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLN 725

Query:   131 IDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
             ID    D K++ + +W  + +   S++ +LF GQLKST+ C  C  TS TF+ F ++S+P
Sbjct:   726 IDDNLSDNKKA-DLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVP 784

Query:   191 LPSNDYCSL 199
             LPS+  C L
Sbjct:   785 LPSSSRCKL 793


>UNIPROTKB|K7EQL6 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 HGNC:HGNC:19143 EMBL:AC025048 EMBL:AC003962
            EMBL:AC037475 EMBL:AC104763 Ensembl:ENST00000592339 Uniprot:K7EQL6
        Length = 1274

 Score = 246 (91.7 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 60/194 (30%), Positives = 103/194 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL +YF++    ++ + T       G +A+ +  +
Sbjct:   402 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 460

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
                LW+G  +  +P K +    +   +F     +  +    +     HE L  + +  + 
Sbjct:   461 VQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYV 520

Query:   137 DLKES-GE-------KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
             +LK+S G        ++W    ++N+SI+ +LF+GQL+S V C  C   S  F+ F+ +S
Sbjct:   521 ELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLS 580

Query:   189 LPLPSNDYCSLRVS 202
             LPLP + Y  L ++
Sbjct:   581 LPLPMDSYMHLEIT 594


>TAIR|locus:2183760 [details] [associations]
            symbol:UBP22 "ubiquitin-specific protease 22"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AL365234 eggNOG:COG5533 KO:K11366 HSSP:P40818 EMBL:AF302670
            IPI:IPI00533926 PIR:T50788 RefSeq:NP_568239.1 UniGene:At.6008
            ProteinModelPortal:Q9LEW0 SMR:Q9LEW0 MEROPS:C19.A11 PaxDb:Q9LEW0
            PRIDE:Q9LEW0 EnsemblPlants:AT5G10790.1 GeneID:830946
            KEGG:ath:AT5G10790 TAIR:At5g10790 HOGENOM:HOG000007260
            InParanoid:Q9LEW0 OMA:RTKTKEN PhylomeDB:Q9LEW0
            ProtClustDB:CLSN2689591 Genevestigator:Q9LEW0 Uniprot:Q9LEW0
        Length = 557

 Score = 240 (89.5 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 61/181 (33%), Positives = 97/181 (53%)

Query:    16 WTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAE-- 72
             WT   GL GL NLG+TC++N++LQ L +  PLR ++++ +  R +     +T G L    
Sbjct:   170 WTFPLGLRGLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPR--RTMGLLCLPC 227

Query:    73 EFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILID 132
             +  +IF+ +++GD   +SP      H L   ++            YEQQDSHEF   L+D
Sbjct:   228 DLDVIFSAMFSGDRTPYSPA-----HLLYSWWQHSTN-----LATYEQQDSHEFFISLLD 277

Query:   133 TLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLP 192
              +HE+  E   K   +  ++ + I  + F G L+S V C  C  TS+T++ F ++SL L 
Sbjct:   278 RIHEN--EGKSKCLYQDNEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLD 335

Query:   193 S 193
             S
Sbjct:   336 S 336


>RGD|1306657 [details] [associations]
            symbol:Usp32 "ubiquitin specific peptidase 32" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00695 Prosite:PS00018 RGD:1306657
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 EMBL:CH473948 GO:GO:0004221 CTD:84669 KO:K11837
            OrthoDB:EOG49S65F GeneTree:ENSGT00680000099843 IPI:IPI00870119
            RefSeq:NP_001100502.1 UniGene:Rn.16359 Ensembl:ENSRNOT00000036814
            GeneID:303394 KEGG:rno:303394 NextBio:651274 Uniprot:D3ZBB7
        Length = 1431

 Score = 246 (91.7 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 60/194 (30%), Positives = 103/194 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL +YF++    ++ + T       G +A+ +  +
Sbjct:   559 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 617

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
                LW+G  +  +P K +    +   +F     +  +    +     HE L  + +  + 
Sbjct:   618 VQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYV 677

Query:   137 DLKES-GE-------KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
             +LK+S G        ++W    ++N+SI+ +LF+GQL+S V C  C   S  F+ F+ +S
Sbjct:   678 ELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLS 737

Query:   189 LPLPSNDYCSLRVS 202
             LPLP + Y  L ++
Sbjct:   738 LPLPMDSYMHLEIT 751


>UNIPROTKB|F1N3S5 [details] [associations]
            symbol:Bt.110642 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0005509 "calcium ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00018 GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 OMA:SDNNNQC
            GeneTree:ENSGT00680000099843 EMBL:DAAA02048411 EMBL:DAAA02048412
            EMBL:DAAA02048413 EMBL:DAAA02048414 IPI:IPI00705388
            Ensembl:ENSBTAT00000026766 Uniprot:F1N3S5
        Length = 1542

 Score = 246 (91.7 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 60/194 (30%), Positives = 103/194 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL +YF++    ++ + T       G +A+ +  +
Sbjct:   670 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 728

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
                LW+G  +  +P K +    +   +F     +  +    +     HE L  + +  + 
Sbjct:   729 VQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYV 788

Query:   137 DLKES-GE-------KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
             +LK+S G        ++W    ++N+SI+ +LF+GQL+S V C  C   S  F+ F+ +S
Sbjct:   789 ELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLS 848

Query:   189 LPLPSNDYCSLRVS 202
             LPLP + Y  L ++
Sbjct:   849 LPLPMDSYMHLEIT 862


>UNIPROTKB|G5E9A6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005737 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL096791 EMBL:CH471164 UniGene:Hs.171501 HGNC:HGNC:12609
            ChiTaRS:USP11 ProteinModelPortal:G5E9A6 SMR:G5E9A6 PRIDE:G5E9A6
            Ensembl:ENST00000377107 ArrayExpress:G5E9A6 Bgee:G5E9A6
            Uniprot:G5E9A6
        Length = 920

 Score = 243 (90.6 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 64/198 (32%), Positives = 97/198 (48%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:   263 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADL 322

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFR---GYEQQDSHEFLTI---- 129
                 W+G  R   P  FK K   VG F  + +G  +   +    +     HE L      
Sbjct:   323 VKQAWSGHHRSIVPHVFKNK---VGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKK 379

Query:   130 ----LIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFS 185
                 L D      +E  +++W   +++N S+I + F+G  KST++C +C   S TF+ F 
Sbjct:   380 EYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFC 439

Query:   186 NVSLPLPSNDYCSLRVSF 203
              +S+PLP +    L V F
Sbjct:   440 YLSVPLPISHKRVLEVFF 457


>UNIPROTKB|Q8NFA0 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase 32"
            species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016579 "protein
            deubiquitination" evidence=TAS] InterPro:IPR001125
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            Pfam:PF13202 PRINTS:PR00450 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00054
            SMART:SM00695 Prosite:PS00018 GO:GO:0005794 GO:GO:0016020
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 eggNOG:COG5210 GO:GO:0016579 GO:GO:0004221
            CleanEx:HS_USP10 EMBL:AF533230 EMBL:AF350251 EMBL:AF155116
            IPI:IPI00185661 RefSeq:NP_115971.2 UniGene:Hs.132868
            ProteinModelPortal:Q8NFA0 SMR:Q8NFA0 IntAct:Q8NFA0 STRING:Q8NFA0
            MEROPS:C19.044 PhosphoSite:Q8NFA0 DMDM:47606649 PaxDb:Q8NFA0
            PRIDE:Q8NFA0 DNASU:84669 Ensembl:ENST00000300896 GeneID:84669
            KEGG:hsa:84669 UCSC:uc002iyn.1 CTD:84669 GeneCards:GC17M058254
            HGNC:HGNC:19143 HPA:HPA044365 MIM:607740 neXtProt:NX_Q8NFA0
            PharmGKB:PA134982542 HOGENOM:HOG000007511 HOVERGEN:HBG057958
            InParanoid:Q8NFA0 KO:K11837 OMA:SDNNNQC OrthoDB:EOG49S65F
            PhylomeDB:Q8NFA0 ChiTaRS:USP32 GenomeRNAi:84669 NextBio:74669
            ArrayExpress:Q8NFA0 Bgee:Q8NFA0 CleanEx:HS_USP32
            Genevestigator:Q8NFA0 GermOnline:ENSG00000170832 Uniprot:Q8NFA0
        Length = 1604

 Score = 246 (91.7 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 60/194 (30%), Positives = 103/194 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL +YF++    ++ + T       G +A+ +  +
Sbjct:   732 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 790

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
                LW+G  +  +P K +    +   +F     +  +    +     HE L  + +  + 
Sbjct:   791 VQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYV 850

Query:   137 DLKES-GE-------KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
             +LK+S G        ++W    ++N+SI+ +LF+GQL+S V C  C   S  F+ F+ +S
Sbjct:   851 ELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLS 910

Query:   189 LPLPSNDYCSLRVS 202
             LPLP + Y  L ++
Sbjct:   911 LPLPMDSYMHLEIT 924


>UNIPROTKB|F1PDR8 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0005509 "calcium ion
            binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13202 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00054 SMART:SM00695 Prosite:PS00018 GO:GO:0008234
            GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0006511
            GO:GO:0004221 OMA:SDNNNQC GeneTree:ENSGT00680000099843
            EMBL:AAEX03006607 EMBL:AAEX03006603 EMBL:AAEX03006604
            EMBL:AAEX03006605 EMBL:AAEX03006606 Ensembl:ENSCAFT00000028225
            Uniprot:F1PDR8
        Length = 1633

 Score = 246 (91.7 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 60/194 (30%), Positives = 103/194 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL +YF++    ++ + T       G +A+ +  +
Sbjct:   761 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 819

Query:    78 FNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE 136
                LW+G  +  +P K +    +   +F     +  +    +     HE L  + +  + 
Sbjct:   820 VQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYV 879

Query:   137 DLKES-GE-------KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVS 188
             +LK+S G        ++W    ++N+SI+ +LF+GQL+S V C  C   S  F+ F+ +S
Sbjct:   880 ELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVRCKTCGHISVRFDPFNFLS 939

Query:   189 LPLPSNDYCSLRVS 202
             LPLP + Y  L ++
Sbjct:   940 LPLPMDSYMHLEIT 953


>UNIPROTKB|P51784 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase 11"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IDA] Reactome:REACT_17015 InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            EMBL:AL096791 eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            MEROPS:C19.014 HOVERGEN:HBG000864 EMBL:BC140849 EMBL:BC000350
            EMBL:AB073597 EMBL:U44839 IPI:IPI00184533 RefSeq:NP_004642.2
            UniGene:Hs.171501 ProteinModelPortal:P51784 SMR:P51784
            DIP:DIP-27567N IntAct:P51784 MINT:MINT-1147600 STRING:P51784
            PhosphoSite:P51784 DMDM:251757432 PaxDb:P51784 PRIDE:P51784
            Ensembl:ENST00000218348 GeneID:8237 KEGG:hsa:8237 UCSC:uc004dhp.3
            CTD:8237 GeneCards:GC0XP047093 HGNC:HGNC:12609 HPA:HPA003103
            HPA:HPA037536 MIM:300050 neXtProt:NX_P51784 PharmGKB:PA37235
            InParanoid:P51784 OMA:GICGLTN PhylomeDB:P51784 ChiTaRS:USP11
            GenomeRNAi:8237 NextBio:30985 ArrayExpress:P51784 Bgee:P51784
            CleanEx:HS_USP11 Genevestigator:P51784 GermOnline:ENSG00000102226
            Uniprot:P51784
        Length = 963

 Score = 243 (90.6 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 64/198 (32%), Positives = 97/198 (48%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:   306 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADL 365

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEE-VGKMKRTFR---GYEQQDSHEFLTI---- 129
                 W+G  R   P  FK K   VG F  + +G  +   +    +     HE L      
Sbjct:   366 VKQAWSGHHRSIVPHVFKNK---VGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKK 422

Query:   130 ----LIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFS 185
                 L D      +E  +++W   +++N S+I + F+G  KST++C +C   S TF+ F 
Sbjct:   423 EYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFC 482

Query:   186 NVSLPLPSNDYCSLRVSF 203
              +S+PLP +    L V F
Sbjct:   483 YLSVPLPISHKRVLEVFF 500


>ZFIN|ZDB-GENE-030131-3055 [details] [associations]
            symbol:usp19 "ubiquitin specific peptidase 19"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0021551 "central nervous system
            morphogenesis" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            ZFIN:ZDB-GENE-030131-3055 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            eggNOG:COG5560 GeneTree:ENSGT00670000097750 HOGENOM:HOG000074206
            HOVERGEN:HBG061889 InterPro:IPR015054 Pfam:PF08959 OMA:PQCKQHR
            OrthoDB:EOG4NVZJG EMBL:AL953864 IPI:IPI00490903
            Ensembl:ENSDART00000147778 Uniprot:B7ZDA8
        Length = 1478

 Score = 244 (91.0 bits), Expect = 3.5e-19, P = 3.5e-19
 Identities = 69/194 (35%), Positives = 92/194 (47%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG TGL NLGNTC++NS++Q LSNT  LR+YF    F+  +       T G+LA  F ++
Sbjct:   635 PGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRGFESEINCNNPLGTGGRLAIGFAVL 694

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                LW G    F P K K            V      F GY Q D+ EF+  L+D LHED
Sbjct:   695 LRALWKGTHHAFQPSKLKAI----------VASKASQFTGYAQHDAQEFMAFLLDGLHED 744

Query:   138 LKE------------SG-------EKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             L               G       E++W   + +N S I +LF GQ KS ++       S
Sbjct:   745 LNRIQNKPYTETVDSDGRQDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLV-------S 797

Query:   179 STFEVFSNVSLPLP 192
              TF+ F  + +PLP
Sbjct:   798 ITFDPFLYLPVPLP 811


>ZFIN|ZDB-GENE-100211-1 [details] [associations]
            symbol:usp43a "ubiquitin specific peptidase 43a"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-100211-1 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00680000099843 EMBL:AL929281
            EMBL:CR933785 EMBL:CU929170 IPI:IPI00852216
            Ensembl:ENSDART00000085669 Uniprot:F1Q8C6
        Length = 1154

 Score = 179 (68.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 46/133 (34%), Positives = 68/133 (51%)

Query:    16 WTVG---PGLTGLKNLGNTCYINSILQCLSNTSPLREYF-VTEFKRSMTAAY-------S 64
             W  G   PG+ GLKN GNTC++N+++QCLSNT  L EY  + ++K  +            
Sbjct:   104 WCYGEKTPGVQGLKNHGNTCFMNAVVQCLSNTELLAEYLGLEQYKYELNERRINGMMKSE 163

Query:    65 KTSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSH 124
             +  G++ ++   +   LW  D   ++PQ       L   FK  V K    F+G  Q D+ 
Sbjct:   164 EVRGEVTDKLASLVRALWTND---YTPQ-------LSVDFKSVVAKYGSQFKGNAQHDAL 213

Query:   125 EFLTILIDTLHED 137
             EFL  L+D +HED
Sbjct:   214 EFLLWLLDCVHED 226

 Score = 86 (35.3 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query:   155 SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLRVS 202
             S + E F  Q +S++ C +C + S+TF+ F  +SLP+P     +L V+
Sbjct:   267 SFVQEHFQAQYRSSLTCPHCLKQSNTFDPFLCISLPIPLRQTRALNVT 314


>RGD|1303052 [details] [associations]
            symbol:Usp11 "ubiquitin specific peptidase 11" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=TAS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;TAS]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS50235 RGD:1303052 GO:GO:0005634 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004221 MEROPS:C19.014 HOVERGEN:HBG000864
            IPI:IPI00421768 UniGene:Rn.2492 EMBL:BN000322
            ProteinModelPortal:Q6IE71 PRIDE:Q6IE71 UCSC:RGD:1303052
            InParanoid:Q6IE71 ArrayExpress:Q6IE71 Genevestigator:Q6IE71
            Uniprot:Q6IE71
        Length = 700

 Score = 234 (87.4 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 63/195 (32%), Positives = 99/195 (50%)

Query:    20 PGLTGLKNLGNTCYINSILQ-CLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQL 76
             PG+ GL NLGNTC++NS LQ CLSN   L EYF+   +   +         G+LAE +  
Sbjct:    32 PGICGLTNLGNTCFMNSALQQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYAD 91

Query:    77 IFNMLWAGDSRYFSPQKFKVK--H---ELVGKFKEEVGKMKRTFRGYEQQDSH-----EF 126
             +    W+G  R   P  FK K  H   + +G  + +  ++         +D +     E+
Sbjct:    92 LVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEY 151

Query:   127 LTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSN 186
             + +       DL E  +++W   +++N S+I + F+G  KST++C +C   S TF+ F  
Sbjct:   152 VELCNGAGRPDL-EVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCY 210

Query:   187 VSLPLPSNDYCSLRV 201
             +S+PLP    CS RV
Sbjct:   211 LSVPLP---VCSRRV 222


>SGD|S000002476 [details] [associations]
            symbol:DOA4 "Ubiquitin isopeptidase" species:4932
            "Saccharomyces cerevisiae" [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IMP;IDA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=TAS] [GO:0006897 "endocytosis" evidence=IMP] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0006275 "regulation of DNA
            replication" evidence=IMP] [GO:0004175 "endopeptidase activity"
            evidence=IGI;IPI] [GO:0000502 "proteasome complex" evidence=IPI]
            [GO:0010995 "free ubiquitin chain depolymerization" evidence=IDA]
            [GO:0010992 "ubiquitin homeostasis" evidence=IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0005768 "endosome"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;IMP]
            [GO:0043162 "ubiquitin-dependent protein catabolic process via the
            multivesicular body sorting pathway" evidence=IMP] [GO:0031902
            "late endosome membrane" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 SGD:S000002476 GO:GO:0005739 GO:GO:0006275
            GO:GO:0031902 GO:GO:0005768 GO:GO:0006897 EMBL:BK006938
            GO:GO:0004175 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000502 EMBL:Z46796
            EMBL:X84162 EMBL:Z49209 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5533 GO:GO:0043162 GO:GO:0010992 RefSeq:NP_010354.3
            GeneID:851641 KEGG:sce:YDR069C KO:K11839 RefSeq:NP_010358.3
            GeneID:851645 KEGG:sce:YDR073W KO:K11774
            GeneTree:ENSGT00670000097591 OrthoDB:EOG4HX88F EMBL:U02518
            EMBL:L08070 EMBL:Z74365 PIR:S39344 ProteinModelPortal:P32571
            SMR:P32571 DIP:DIP-5298N IntAct:P32571 MINT:MINT-550253
            STRING:P32571 MEROPS:C19.005 PaxDb:P32571 EnsemblFungi:YDR069C
            CYGD:YDR069c HOGENOM:HOG000248489 OMA:YIVFYER NextBio:969209
            Genevestigator:P32571 GermOnline:YDR069C GO:GO:0010995
            Uniprot:P32571
        Length = 926

 Score = 164 (62.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 41/121 (33%), Positives = 61/121 (50%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIFNML 81
             GL+NLGN+CY+N I+QC+  T  L + F+ +         SK   K  LA+ F  + +M+
Sbjct:   563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622

Query:    82 WAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKES 141
             +    +    +K  +      KFK   G +   F+   QQD  EF   L+D LHEDL + 
Sbjct:   623 YK--EQVDGSKKISISPI---KFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQC 677

Query:   142 G 142
             G
Sbjct:   678 G 678

 Score = 98 (39.6 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 19/58 (32%), Positives = 33/58 (56%)

Query:   138 LKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
             L+ +    W  F   + S+I +LF GQ  S + C  C  TS+T++ F+ +S+P+P  +
Sbjct:   699 LRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKN 756


>RGD|1562211 [details] [associations]
            symbol:Usp51 "ubiquitin specific peptidase 51" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 RGD:1562211
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 KO:K11366
            GeneTree:ENSGT00690000101718 OrthoDB:EOG48PMJS CTD:158880
            EMBL:CH474063 IPI:IPI00561109 RefSeq:NP_001101722.1
            UniGene:Rn.56303 Ensembl:ENSRNOT00000029397 GeneID:317398
            KEGG:rno:317398 UCSC:RGD:1562211 NextBio:671739 Uniprot:D3ZUR6
        Length = 696

 Score = 233 (87.1 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 62/183 (33%), Positives = 97/183 (53%)

Query:    10 RIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK 69
             R K +++TVG  L GL NLGNTC++N I+Q L+    L+E+F+++  + M  + S     
Sbjct:   349 RKKTVYYTVG--LRGLINLGNTCFMNCIVQALTRIPLLKEFFLSDKHKCMMTSPSLC--- 403

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F  +++G+     P  +K+ H L+    E +        GY QQD+HEFL  
Sbjct:   404 LVCEMSSLFQAMYSGNQSPHIP--YKLLH-LIWIHAEHLA-------GYRQQDAHEFLIA 453

Query:   130 LIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSL 189
             ++D LH   ++ G +  G     N  II  +F G L+S V C  C   S+T +   ++SL
Sbjct:   454 ILDVLHRHSRDDGIEQEGNLNHCN-CIIDYIFTGGLQSDVTCQVCHGVSTTIDPCWDISL 512

Query:   190 PLP 192
              LP
Sbjct:   513 DLP 515


>WB|WBGene00008547 [details] [associations]
            symbol:F07A11.4 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50865 GO:GO:0008270 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5560
            GeneTree:ENSGT00670000097750 KO:K11847 EMBL:Z66511 GeneID:174780
            KEGG:cel:CELE_F07A11.4 CTD:174780 PIR:T20528 RefSeq:NP_001254304.1
            ProteinModelPortal:Q19132 MEROPS:C19.A39 PaxDb:Q19132
            EnsemblMetazoa:F07A11.4 UCSC:F07A11.4 WormBase:F07A11.4a
            HOGENOM:HOG000016865 InParanoid:Q19132 OMA:RNDSIFV NextBio:885468
            Uniprot:Q19132
        Length = 1095

 Score = 232 (86.7 bits), Expect = 4.5e-18, P = 4.5e-18
 Identities = 63/189 (33%), Positives = 92/189 (48%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV-TEFKRSMTAAYSKTS-GKLAEEFQ 75
             V  G TGL+N+GNTC++N++LQ L N   LREYF+   ++  +       S G+LA+ F 
Sbjct:   418 VEQGYTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFA 477

Query:    76 LIFNMLWAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI----- 129
                + +W+G  +   P + K +  E   +F          F  +     HE +       
Sbjct:   478 DFMHQMWSGHQKAIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKP 537

Query:   130 LIDTL--H--EDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFS 185
             L  T+  H   DL  S E +W     +N SI  +LF+GQLKS V C NC   S TF+ F 
Sbjct:   538 LTGTVESHGRHDLDVSNE-AWKNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFV 596

Query:   186 NVSLPLPSN 194
              + +P P N
Sbjct:   597 YLPVPFPKN 605


>UNIPROTKB|F1NW53 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:SYQEPSD GeneTree:ENSGT00680000099843 EMBL:AADN02023614
            IPI:IPI00597852 Ensembl:ENSGALT00000010155 Uniprot:F1NW53
        Length = 1310

 Score = 231 (86.4 bits), Expect = 7.3e-18, P = 7.3e-18
 Identities = 63/190 (33%), Positives = 93/190 (48%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMT--AAYSKTSGKLAEEFQLI 77
             PG+ GL+N GNTC++N+ILQCLSNT    E+   E  R            G++ E+   +
Sbjct:   100 PGVAGLRNHGNTCFMNAILQCLSNTELFAEFLALEQFRGPAEPGPPPPAPGEVTEQLAQL 159

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                LW  +   ++PQ  +        FK  V K    +RG  Q D+ EFL  L+D +HED
Sbjct:   160 VRALWTLE---YTPQHSR-------DFKNIVSKNAMQYRGNAQHDAQEFLLWLLDRVHED 209

Query:   138 LKE----SGEKSW-----------GEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L      SG               G     + + + ELF  Q +S++ C +CQ+ S+TF+
Sbjct:   210 LNNVVNYSGMPPLKPPLEDDVLLEGPAFPISSTFVQELFQAQYRSSLTCPHCQKQSNTFD 269

Query:   183 VFSNVSLPLP 192
              F  +SLP+P
Sbjct:   270 PFLCISLPIP 279


>UNIPROTKB|F1PGC7 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:SYQEPSD GeneTree:ENSGT00680000099843 EMBL:AAEX03004452
            EMBL:AAEX03004453 Ensembl:ENSCAFT00000028068 Uniprot:F1PGC7
        Length = 1270

 Score = 222 (83.2 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
 Identities = 63/199 (31%), Positives = 99/199 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSM----------TAAYSKTSG 68
             PG+ GL+N GNTC++N+ LQCLSNT    EY    +++                 ++  G
Sbjct:    42 PGVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPVGRGTQGQG 101

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLT 128
             ++ E+   +   LW  +   ++PQ  +        FK  V K    +RG  Q D+ EFL 
Sbjct:   102 EVTEQLAHLVRALWTLE---YTPQHSR-------DFKSIVSKNALQYRGNSQHDAQEFLL 151

Query:   129 ILIDTLHEDL----KESGEK-----SWGEFRKKNKSI------ISELFYGQLKSTVICCN 173
              L+D +HEDL    K+SG+      S  +   +  S       + ELF  Q +S++ C +
Sbjct:   152 WLLDRVHEDLNHAVKQSGQPPVKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLTCPH 211

Query:   174 CQETSSTFEVFSNVSLPLP 192
             CQ+ S+TF+ F  +SLP+P
Sbjct:   212 CQKQSNTFDPFLCISLPIP 230

 Score = 36 (17.7 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query:   185 SNVSLPLPSNDYCSLRVSF 203
             S+V+ PL  ND C +R S+
Sbjct:   768 SSVTSPLAVNDNC-IRPSW 785


>UNIPROTKB|F1PLI6 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0030374 "ligand-dependent nuclear receptor transcription
            coactivator activity" evidence=IEA] [GO:0016578 "histone
            deubiquitination" evidence=IEA] [GO:0016574 "histone
            ubiquitination" evidence=IEA] [GO:0010485 "H4 histone
            acetyltransferase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            GO:GO:0010485 GeneTree:ENSGT00690000101718 OMA:IHEHAKA
            EMBL:AAEX03003735 EMBL:AAEX03003736 Ensembl:ENSCAFT00000029408
            Uniprot:F1PLI6
        Length = 471

 Score = 223 (83.6 bits), Expect = 8.7e-18, P = 8.7e-18
 Identities = 62/176 (35%), Positives = 90/176 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R         S  L  E   +F  
Sbjct:   120 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHR---CEMQSPSSCLVCEMSSLFQE 176

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
              ++G      P  +K+ H LV           R   GYEQQD+HEFL   +D LH   K 
Sbjct:   177 FYSGHRSPHIP--YKLLH-LVWTHA-------RHLAGYEQQDAHEFLIAALDVLHRHCK- 225

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +  +    N    II ++F G L+S V C  C   S+T + F ++SL LP +
Sbjct:   226 -GDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 280


>UNIPROTKB|E1BKF4 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:RSISMKA GeneTree:ENSGT00680000099843 EMBL:DAAA02048838
            EMBL:DAAA02048839 IPI:IPI00904143 Ensembl:ENSBTAT00000000131
            Uniprot:E1BKF4
        Length = 1121

 Score = 229 (85.7 bits), Expect = 9.7e-18, P = 9.7e-18
 Identities = 64/191 (33%), Positives = 98/191 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R+          ++ E+   +  
Sbjct:    97 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALRRYRAEPGR-----AEVTEQLAALVR 151

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   152 ALW---TREYTPQ-------LSAEFKNAVSKYGAQFQGNAQHDALEFLLWLLDRVHEDLE 201

Query:   140 ESG-----EKSWGEFRKKNKSIISEL-------------FYGQLKSTVICCNCQETSSTF 181
              S      +K   E RK +++++S               F  Q +S++ C +C + S+TF
Sbjct:   202 GSSRGPGSDKLQPEARKTSENLLSPSAPLSMGQSFVQSHFQAQYRSSLTCPHCLKQSNTF 261

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   262 DPFLCVSLPIP 272


>UNIPROTKB|F1SS87 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            CTD:124739 KO:K11856 OMA:RSISMKA GeneTree:ENSGT00680000099843
            EMBL:CU929537 RefSeq:XP_003132035.1 UniGene:Ssc.22285
            Ensembl:ENSSSCT00000019584 GeneID:100515447 KEGG:ssc:100515447
            Uniprot:F1SS87
        Length = 1123

 Score = 229 (85.7 bits), Expect = 9.7e-18, P = 9.7e-18
 Identities = 64/191 (33%), Positives = 97/191 (50%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R++         ++ E+   +  
Sbjct:   100 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAVPGR-----AEVTEQLAALVR 154

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   155 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLE 204

Query:   140 ESG-----EKSWGEFRKKNK-------------SIISELFYGQLKSTVICCNCQETSSTF 181
              S      +K   E RK ++             S +   F  Q +S++ C +C + S+TF
Sbjct:   205 GSARGPTADKLLPEARKTSENPPSPSAQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTF 264

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   265 DPFLCVSLPIP 275


>ZFIN|ZDB-GENE-060512-211 [details] [associations]
            symbol:usp22 "ubiquitin specific peptidase 22"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
            cycle" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            ZFIN:ZDB-GENE-060512-211 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 GO:GO:0006351 GO:GO:0016568
            GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 KO:K11366 HOGENOM:HOG000007260
            CTD:23326 HOVERGEN:HBG058014 OrthoDB:EOG48PMJS EMBL:BC116508
            EMBL:BC146618 IPI:IPI00855315 IPI:IPI00923761 RefSeq:NP_001038713.1
            UniGene:Dr.87145 ProteinModelPortal:A6H8I0 STRING:A6H8I0
            MEROPS:C19.035 PRIDE:A6H8I0 GeneID:692275 KEGG:dre:692275
            NextBio:20902479 Bgee:A6H8I0 Uniprot:A6H8I0
        Length = 506

 Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 62/174 (35%), Positives = 89/174 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R      S +   L  E   +F  
Sbjct:   157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD--RHKCEMQSNSC--LVCEMSQLFQE 212

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
              ++G      P  F++ H LV           R   GYEQQD+HEFL   +D LH   K+
Sbjct:   213 FYSGHRSPHIP--FRLLH-LVWTHA-------RHLAGYEQQDAHEFLIAALDVLHRHCKD 262

Query:   141 SGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
                K        N  II ++F G L+S V C  C   S+T + F ++SL LP +
Sbjct:   263 DNGKKANNPNHCN-CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 315


>UNIPROTKB|P0C8Z3 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase 22"
            species:9913 "Bos taurus" [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
            [GO:0010485 "H4 histone acetyltransferase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000124 "SAGA complex" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0006351
            GO:GO:0007049 GO:GO:0000124 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0030374 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0016574 GO:GO:0010485 eggNOG:COG5533 KO:K11366
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000007260 EMBL:EE333442
            EMBL:EH202007 EMBL:EV691513 IPI:IPI00707759 RefSeq:NP_001160039.1
            UniGene:Bt.12486 Ensembl:ENSBTAT00000011818 GeneID:509694
            KEGG:bta:509694 CTD:23326 HOVERGEN:HBG058014 OMA:DMEMIAK
            OrthoDB:EOG48PMJS NextBio:20869082 ArrayExpress:P0C8Z3
            Uniprot:P0C8Z3
        Length = 514

 Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 62/176 (35%), Positives = 90/176 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R         S  L  E   +F  
Sbjct:   163 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHR---CEMQSPSSCLVCEMSSLFQE 219

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
              ++G      P  +K+ H LV           R   GYEQQD+HEFL   +D LH   K 
Sbjct:   220 FYSGHRSPHIP--YKLLH-LVWTHA-------RHLAGYEQQDAHEFLIAALDVLHRHCK- 268

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +  +    N    II ++F G L+S V C  C   S+T + F ++SL LP +
Sbjct:   269 -GDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 323


>ZFIN|ZDB-GENE-040426-774 [details] [associations]
            symbol:usp44 "ubiquitin specific peptidase 44"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
            [GO:0051322 "anaphase" evidence=ISS] [GO:0090231 "regulation of
            spindle checkpoint" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0060564 "negative regulation of
            mitotic anaphase-promoting complex activity" evidence=ISS]
            [GO:0021551 "central nervous system morphogenesis" evidence=IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0007067
            "mitosis" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0051301 "cell division"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 ZFIN:ZDB-GENE-040426-774 GO:GO:0005634 GO:GO:0051301
            GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0021551 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 CTD:84101 HOGENOM:HOG000015084 KO:K11834
            EMBL:BC048060 IPI:IPI00512839 RefSeq:NP_956551.1 UniGene:Dr.78996
            ProteinModelPortal:Q7ZUM8 MEROPS:C19.073 PRIDE:Q7ZUM8 GeneID:393227
            KEGG:dre:393227 HOVERGEN:HBG018027 InParanoid:Q7ZUM8
            NextBio:20814291 ArrayExpress:Q7ZUM8 Uniprot:Q7ZUM8
        Length = 695

 Score = 141 (54.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 41/130 (31%), Positives = 65/130 (50%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   387 LCHELHTLFPVMWSGKWALVSP--FAMLHS--------VWQLIPAFRGYAQQDAQEFLCE 436

Query:   130 LIDTLHEDLKESGEKS-----WGEFR--KKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             L+D +  +L+ +   +       + R  K+  S+++ +F+GQL S V C  C   S+T E
Sbjct:   437 LLDKVQHELERTRTLTPATVPANQRRLIKQVLSVVNTIFHGQLLSQVRCLACDHRSNTIE 496

Query:   183 VFSNVSLPLP 192
              F ++SL  P
Sbjct:   497 PFWDLSLEFP 506

 Score = 130 (50.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query:    17 TVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQ 75
             TV PG+TGL+NLGNTCY+NSILQ LS+    RE F+  +  +++    S  S KL    Q
Sbjct:   289 TVTPGVTGLRNLGNTCYMNSILQVLSHLHVFRECFLRLDLNQALELLASAVSRKLGLSAQ 348

Query:    76 LI 77
              +
Sbjct:   349 RV 350


>UNIPROTKB|Q9UPT9 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase 22"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IDA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IMP;IDA] [GO:0009790 "embryo development" evidence=NAS]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0016574
            "histone ubiquitination" evidence=IDA] [GO:0016578 "histone
            deubiquitination" evidence=IDA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IMP] [GO:0010485 "H4 histone
            acetyltransferase activity" evidence=IDA] [GO:0070461 "SAGA-type
            complex" evidence=IDA] [GO:0043967 "histone H4 acetylation"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0006351
            GO:GO:0009790 GO:GO:0007049 GO:GO:0043967 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            eggNOG:COG5533 KO:K11366 HOGENOM:HOG000007260 CTD:23326
            HOVERGEN:HBG058014 OrthoDB:EOG48PMJS MEROPS:C19.035 EMBL:AB028986
            EMBL:BC007196 EMBL:BC025317 EMBL:BC110499 EMBL:BC126898
            EMBL:BX640815 IPI:IPI00852960 IPI:IPI00923593 RefSeq:NP_056091.1
            UniGene:Hs.462492 ProteinModelPortal:Q9UPT9 SMR:Q9UPT9
            IntAct:Q9UPT9 MINT:MINT-1390273 STRING:Q9UPT9 PhosphoSite:Q9UPT9
            DMDM:78103328 PaxDb:Q9UPT9 PRIDE:Q9UPT9 Ensembl:ENST00000261497
            Ensembl:ENST00000537526 GeneID:23326 KEGG:hsa:23326 UCSC:uc002gyl.4
            UCSC:uc002gyn.4 GeneCards:GC17M020902 HGNC:HGNC:12621 HPA:HPA044980
            MIM:612116 neXtProt:NX_Q9UPT9 PharmGKB:PA37247 InParanoid:Q9UPT9
            ChiTaRS:USP22 GenomeRNAi:23326 NextBio:45232 ArrayExpress:Q9UPT9
            Bgee:Q9UPT9 CleanEx:HS_USP22 Genevestigator:Q9UPT9
            GermOnline:ENSG00000124422 Uniprot:Q9UPT9
        Length = 525

 Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 62/176 (35%), Positives = 90/176 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R         S  L  E   +F  
Sbjct:   174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHR---CEMQSPSSCLVCEMSSLFQE 230

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
              ++G      P  +K+ H LV           R   GYEQQD+HEFL   +D LH   K 
Sbjct:   231 FYSGHRSPHIP--YKLLH-LVWTHA-------RHLAGYEQQDAHEFLIAALDVLHRHCK- 279

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +  +    N    II ++F G L+S V C  C   S+T + F ++SL LP +
Sbjct:   280 -GDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 334


>MGI|MGI:2144157 [details] [associations]
            symbol:Usp22 "ubiquitin specific peptidase 22" species:10090
            "Mus musculus" [GO:0000124 "SAGA complex" evidence=ISO] [GO:0003713
            "transcription coactivator activity" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;IDA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IC] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
            evidence=ISO] [GO:0016578 "histone deubiquitination" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=ISO;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=ISO] [GO:0043967 "histone H4 acetylation"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=ISO] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2144157
            GO:GO:0045893 GO:GO:0046872 GO:GO:0045931 GO:GO:0008270
            GO:GO:0006351 GO:GO:0007049 GO:GO:0000124 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:AL646093 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0016574 GO:GO:0010485 eggNOG:COG5533 KO:K11366
            GeneTree:ENSGT00690000101718 CTD:23326 HOVERGEN:HBG058014
            OrthoDB:EOG48PMJS MEROPS:C19.035 EMBL:AK084022 EMBL:AK220368
            EMBL:AK155071 EMBL:AK160992 EMBL:BC058419 EMBL:BC080737
            IPI:IPI00228479 RefSeq:NP_001004143.2 UniGene:Mm.30602
            ProteinModelPortal:Q5DU02 SMR:Q5DU02 STRING:Q5DU02
            PhosphoSite:Q5DU02 PRIDE:Q5DU02 Ensembl:ENSMUST00000041683
            GeneID:216825 KEGG:mmu:216825 UCSC:uc007jhc.2 InParanoid:Q3U2W4
            OMA:IHEHAKA NextBio:375358 Bgee:Q5DU02 CleanEx:MM_USP22
            Genevestigator:Q5DU02 GermOnline:ENSMUSG00000042506 Uniprot:Q5DU02
        Length = 525

 Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 62/176 (35%), Positives = 90/176 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R         S  L  E   +F  
Sbjct:   174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHR---CEMQSPSSCLVCEMSSLFQE 230

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
              ++G      P  +K+ H LV           R   GYEQQD+HEFL   +D LH   K 
Sbjct:   231 FYSGHRSPHIP--YKLLH-LVWTHA-------RHLAGYEQQDAHEFLIAALDVLHRHCK- 279

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +  +    N    II ++F G L+S V C  C   S+T + F ++SL LP +
Sbjct:   280 -GDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 334


>RGD|1310354 [details] [associations]
            symbol:Usp22 "ubiquitin specific peptidase 22" species:10116
            "Rattus norvegicus" [GO:0000124 "SAGA complex" evidence=IEA;ISO]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0010485 "H4 histone acetyltransferase activity"
            evidence=IEA;ISO] [GO:0016574 "histone ubiquitination"
            evidence=IEA;ISO] [GO:0016578 "histone deubiquitination"
            evidence=IEA;ISO] [GO:0016579 "protein deubiquitination"
            evidence=ISO] [GO:0030374 "ligand-dependent nuclear receptor
            transcription coactivator activity" evidence=IEA;ISO] [GO:0043967
            "histone H4 acetylation" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA;ISO] [GO:0070461 "SAGA-type complex" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1310354 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            GO:GO:0010485 KO:K11366 GeneTree:ENSGT00690000101718 CTD:23326
            OrthoDB:EOG48PMJS OMA:IHEHAKA IPI:IPI00369544 RefSeq:NP_001178573.1
            UniGene:Rn.230625 Ensembl:ENSRNOT00000050061 GeneID:303201
            KEGG:rno:303201 UCSC:RGD:1310354 NextBio:650853 Uniprot:D3ZTX7
        Length = 525

 Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 62/176 (35%), Positives = 90/176 (51%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R         S  L  E   +F  
Sbjct:   174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHR---CEMQSPSSCLVCEMSSLFQE 230

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
              ++G      P  +K+ H LV           R   GYEQQD+HEFL   +D LH   K 
Sbjct:   231 FYSGHRSPHIP--YKLLH-LVWTHA-------RHLAGYEQQDAHEFLIAALDVLHRHCK- 279

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +  +    N    II ++F G L+S V C  C   S+T + F ++SL LP +
Sbjct:   280 -GDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 334


>UNIPROTKB|F1LRS9 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            IPI:IPI01016284 Ensembl:ENSRNOT00000016290 ArrayExpress:F1LRS9
            Uniprot:F1LRS9
        Length = 839

 Score = 186 (70.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 45/122 (36%), Positives = 65/122 (53%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK--LAEEFQLIF 78
             GLTGLKN+GNTCY+N+ LQ LSN  PL ++F+           ++T  K  + + +  + 
Sbjct:   164 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLD------CGGLARTDKKPAICKSYLKLM 217

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
               LW          K +    +     + +  +  TFRGY QQD+ EFL  L+D LHE+L
Sbjct:   218 TELW---------HKSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEEL 268

Query:   139 KE 140
             KE
Sbjct:   269 KE 270

 Score = 66 (28.3 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query:   135 HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS 178
             H+  + S  K   +  KK +S+IS++F G + S+V C  C   S
Sbjct:   435 HKKAQSSSPKRKKQ-HKKYRSVISDIFDGTIISSVQCLTCDRVS 477


>UNIPROTKB|F1NG36 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OMA:IHEHAKA EMBL:AADN02023754 EMBL:AADN02023755 IPI:IPI00596070
            Ensembl:ENSGALT00000007615 Uniprot:F1NG36
        Length = 483

 Score = 220 (82.5 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 62/176 (35%), Positives = 93/176 (52%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R      S +S  L  E   +F  
Sbjct:   132 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD--RHKCEMQSPSSC-LVCEMSTLFQE 188

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
              ++G   + SP    + + L+      V    R   GYEQQD+HEFL   +D LH   K 
Sbjct:   189 FYSG---HRSPH---IPYRLL----HLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK- 237

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +  +    N    II ++F G L+S V C  C   S+T + F ++SL LP +
Sbjct:   238 -GDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 292


>UNIPROTKB|E2RFR2 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:RSISMKA GeneTree:ENSGT00680000099843 EMBL:AAEX03003657
            EMBL:AAEX03003658 EMBL:AAEX03003659 Ensembl:ENSCAFT00000027639
            Uniprot:E2RFR2
        Length = 1121

 Score = 226 (84.6 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 67/191 (35%), Positives = 98/191 (51%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R   AA  +   ++ E+   +  
Sbjct:    88 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYR---AAPGRA--EVTEQLAALVR 142

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   143 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNAQHDALEFLLWLLDRVHEDLE 192

Query:   140 ESG-----EKSWGEFRK--KN-----------KSIISELFYGQLKSTVICCNCQETSSTF 181
              S      EK   E  K  +N           +S +   F  Q +S++ C +C + S+TF
Sbjct:   193 GSSRGPGAEKLQPEANKTPENLPSPPAQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTF 252

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   253 DPFLCVSLPIP 263


>UNIPROTKB|B7ZVX5 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase 43"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC027045 EMBL:AC118755
            IPI:IPI00166377 RefSeq:NP_001254505.1 UniGene:Hs.709621
            GeneID:124739 KEGG:hsa:124739 CTD:124739 HGNC:HGNC:20072
            HOVERGEN:HBG094126 KO:K11856 EMBL:BC136368 EMBL:BC171759
            STRING:B7ZVX5 Ensembl:ENST00000570475 UCSC:uc010vva.2
            Uniprot:B7ZVX5
        Length = 1118

 Score = 225 (84.3 bits), Expect = 2.6e-17, P = 2.6e-17
 Identities = 67/191 (35%), Positives = 100/191 (52%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R   AA  +   ++ E+   +  
Sbjct:    98 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYR---AAPGRA--EVTEQLAALVR 152

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   153 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLE 202

Query:   140 ESG-----EKSWGEFRKKNKSIIS---EL----------FYGQLKSTVICCNCQETSSTF 181
              S      EK   E  K +++ +S   +L          F  Q +S++ C +C + S+TF
Sbjct:   203 GSSRGPVSEKLPPEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTF 262

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   263 DPFLCVSLPIP 273


>UNIPROTKB|Q70EL4 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase 43"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CH471108 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 EMBL:AC027045 HSSP:P54578 eggNOG:COG5560
            EMBL:AJ583817 EMBL:AK055188 EMBL:AK090821 EMBL:AC118755
            EMBL:BC144041 IPI:IPI00166377 IPI:IPI00176488 IPI:IPI00739286
            RefSeq:NP_001254505.1 RefSeq:NP_694942.3 UniGene:Hs.709621
            ProteinModelPortal:Q70EL4 IntAct:Q70EL4 MINT:MINT-3976419
            STRING:Q70EL4 MEROPS:C19.976 PhosphoSite:Q70EL4 DMDM:296452852
            PaxDb:Q70EL4 PRIDE:Q70EL4 Ensembl:ENST00000285199
            Ensembl:ENST00000570827 Ensembl:ENST00000573955
            Ensembl:ENST00000574408 GeneID:124739 KEGG:hsa:124739
            UCSC:uc002gma.4 UCSC:uc002gmc.4 CTD:124739 GeneCards:GC17P009489
            H-InvDB:HIX0013531 HGNC:HGNC:20072 HPA:HPA023389 HPA:HPA027762
            neXtProt:NX_Q70EL4 PharmGKB:PA134865304 HOGENOM:HOG000293426
            HOVERGEN:HBG094126 InParanoid:Q70EL4 KO:K11856 OMA:RSISMKA
            OrthoDB:EOG4DR9BH GenomeRNAi:124739 NextBio:81362
            ArrayExpress:Q70EL4 Bgee:Q70EL4 CleanEx:HS_USP43
            Genevestigator:Q70EL4 GermOnline:ENSG00000154914 Uniprot:Q70EL4
        Length = 1123

 Score = 225 (84.3 bits), Expect = 2.6e-17, P = 2.6e-17
 Identities = 67/191 (35%), Positives = 100/191 (52%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R   AA  +   ++ E+   +  
Sbjct:    98 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYR---AAPGRA--EVTEQLAALVR 152

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   153 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLE 202

Query:   140 ESG-----EKSWGEFRKKNKSIIS---EL----------FYGQLKSTVICCNCQETSSTF 181
              S      EK   E  K +++ +S   +L          F  Q +S++ C +C + S+TF
Sbjct:   203 GSSRGPVSEKLPPEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTF 262

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   263 DPFLCVSLPIP 273


>RGD|1562061 [details] [associations]
            symbol:Usp17l5 "ubiquitin specific peptidase 17-like 5"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
            Ensembl:ENSRNOT00000023213 Uniprot:F1M413
        Length = 504

 Score = 140 (54.3 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
 Identities = 28/80 (35%), Positives = 49/80 (61%)

Query:   114 TFRGYEQQDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCN 173
             TF  + Q+D+HEFL   ++T+HE      ++S  E   K+ S+I ++F GQ++S + C +
Sbjct:   125 TFHKHRQEDAHEFLMFTLNTMHESCLRGCKQS--ETTSKDSSLIYDIFGGQMRSQIKCHH 182

Query:   174 CQETSSTFEVFSNVSLPLPS 193
             CQ T  +++ F N+ L + S
Sbjct:   183 CQGTLDSYDPFLNLFLDICS 202

 Score = 124 (48.7 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
 Identities = 24/74 (32%), Positives = 44/74 (59%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG +GL+N+GN+CY+N++LQCL++T PL +Y +++ + S    Y +     A E  +  +
Sbjct:    49 PG-SGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQ-EHSQRCCYPEGCNMCAMEAHVTQS 106

Query:    80 MLWAGDSRYFSPQK 93
             +L +       P +
Sbjct:   107 LLHSHSGGVMKPSE 120


>RGD|1565607 [details] [associations]
            symbol:RGD1565607 "similar to mouse deubiquitinating enzyme 6"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
            Ensembl:ENSRNOT00000023213 Uniprot:F1M413
        Length = 504

 Score = 140 (54.3 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
 Identities = 28/80 (35%), Positives = 49/80 (61%)

Query:   114 TFRGYEQQDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCN 173
             TF  + Q+D+HEFL   ++T+HE      ++S  E   K+ S+I ++F GQ++S + C +
Sbjct:   125 TFHKHRQEDAHEFLMFTLNTMHESCLRGCKQS--ETTSKDSSLIYDIFGGQMRSQIKCHH 182

Query:   174 CQETSSTFEVFSNVSLPLPS 193
             CQ T  +++ F N+ L + S
Sbjct:   183 CQGTLDSYDPFLNLFLDICS 202

 Score = 124 (48.7 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
 Identities = 24/74 (32%), Positives = 44/74 (59%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG +GL+N+GN+CY+N++LQCL++T PL +Y +++ + S    Y +     A E  +  +
Sbjct:    49 PG-SGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQ-EHSQRCCYPEGCNMCAMEAHVTQS 106

Query:    80 MLWAGDSRYFSPQK 93
             +L +       P +
Sbjct:   107 LLHSHSGGVMKPSE 120


>UNIPROTKB|F1MF37 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:SYQEPSD GeneTree:ENSGT00680000099843 EMBL:DAAA02057720
            IPI:IPI00713142 Ensembl:ENSBTAT00000015592 Uniprot:F1MF37
        Length = 1269

 Score = 221 (82.9 bits), Expect = 8.2e-17, P = 8.2e-17
 Identities = 65/199 (32%), Positives = 98/199 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYS-----------KTSG 68
             PG+ GL+N GNTC++N+ LQCLSNT    EY      R+     S           +  G
Sbjct:    42 PGVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGEQGQG 101

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLT 128
             ++ E+   +   LW  +   ++PQ  +        FK  V K    +RG  Q D+ EFL 
Sbjct:   102 EVTEQLAHLVRALWTLE---YTPQHSR-------DFKSIVSKNALQYRGNSQHDAQEFLL 151

Query:   129 ILIDTLHEDL----KESGEK-----SWGEFRKKNKSI------ISELFYGQLKSTVICCN 173
              L+D +HEDL    K+SG+      S  +   +  S       + ELF  Q +S++ C +
Sbjct:   152 WLLDRVHEDLNHAVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLTCPH 211

Query:   174 CQETSSTFEVFSNVSLPLP 192
             CQ+ S+TF+ F  +SLP+P
Sbjct:   212 CQKQSNTFDPFLCISLPIP 230


>DICTYBASE|DDB_G0284381 [details] [associations]
            symbol:DDB_G0284381 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            dictyBase:DDB_G0284381 GO:GO:0008234 GO:GO:0006511
            EMBL:AAFI02000064 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            RefSeq:XP_638597.1 ProteinModelPortal:Q54PQ7
            EnsemblProtists:DDB0237697 GeneID:8624568 KEGG:ddi:DDB_G0284381
            OMA:AYELPHA Uniprot:Q54PQ7
        Length = 1089

 Score = 220 (82.5 bits), Expect = 8.5e-17, P = 8.5e-17
 Identities = 58/188 (30%), Positives = 99/188 (52%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTS-----GKLAEEFQLIF 78
             GL NLGNTC++NS +QCL++T PL EYF++   R +    +KT+     G++A+ +  + 
Sbjct:   404 GLSNLGNTCFMNSSIQCLAHTGPLVEYFLSG--RYL-GDINKTNPLGMKGQIADIYGKLM 460

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRT----FRGYEQQDSHEFLTILIDTL 134
               +W+G S   +P+  K    ++GK+  +   + +        +     HE L  +I   
Sbjct:   461 KDMWSGSS-CVAPKHLKW---IIGKYAPQFSGISQQDSQELLSFLLDGLHEDLNKVIKKP 516

Query:   135 HEDLKES----------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVF 184
             +++ K+             + W    K+N+SII  LF GQ KST++C  C + S TF+ +
Sbjct:   517 YQEEKDEPKEPREDIVVANEQWDNHIKRNQSIIVNLFQGQYKSTLVCAKCSKVSITFDPY 576

Query:   185 SNVSLPLP 192
               V+LP+P
Sbjct:   577 MFVTLPIP 584


>UNIPROTKB|Q70CQ4 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase 31"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            HSSP:P54578 eggNOG:COG5560 EMBL:AJ586135 EMBL:AK126447
            EMBL:AK126752 EMBL:AB033029 EMBL:BX648357 IPI:IPI00297289
            IPI:IPI00445176 RefSeq:NP_065769.3 UniGene:Hs.183817
            ProteinModelPortal:Q70CQ4 STRING:Q70CQ4 MEROPS:C19.071
            PhosphoSite:Q70CQ4 DMDM:134047944 PaxDb:Q70CQ4 PRIDE:Q70CQ4
            Ensembl:ENST00000219689 GeneID:57478 KEGG:hsa:57478 UCSC:uc002dll.3
            CTD:57478 GeneCards:GC16M022986 H-InvDB:HIX0012889 HGNC:HGNC:20060
            HPA:HPA006937 neXtProt:NX_Q70CQ4 PharmGKB:PA164742780
            HOGENOM:HOG000154758 HOVERGEN:HBG094125 InParanoid:Q70CQ4 KO:K11852
            OMA:SYQEPSD OrthoDB:EOG43TZTQ PhylomeDB:Q70CQ4 ChiTaRS:USP31
            GenomeRNAi:57478 NextBio:63727 Bgee:Q70CQ4 CleanEx:HS_USP31
            Genevestigator:Q70CQ4 GermOnline:ENSG00000103404 Uniprot:Q70CQ4
        Length = 1352

 Score = 221 (82.9 bits), Expect = 8.9e-17, P = 8.9e-17
 Identities = 63/199 (31%), Positives = 99/199 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSM----------TAAYSKTSG 68
             PG+ GL+N GNTC++N+ LQCLSNT    EY    +++                 ++  G
Sbjct:   125 PGVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQG 184

Query:    69 KLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLT 128
             ++ E+   +   LW  +   ++PQ  +        FK  V K    +RG  Q D+ EFL 
Sbjct:   185 EVTEQLAHLVRALWTLE---YTPQHSR-------DFKTIVSKNALQYRGNSQHDAQEFLL 234

Query:   129 ILIDTLHEDL----KESGEK-----SWGEFRKKNKSI------ISELFYGQLKSTVICCN 173
              L+D +HEDL    K+SG+      S  +   +  S       + ELF  Q +S++ C +
Sbjct:   235 WLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLTCPH 294

Query:   174 CQETSSTFEVFSNVSLPLP 192
             CQ+ S+TF+ F  +SLP+P
Sbjct:   295 CQKQSNTFDPFLCISLPIP 313


>RGD|2303824 [details] [associations]
            symbol:Usp43 "ubiquitin specific peptidase 43" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:2303824 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            IPI:IPI00951601 Ensembl:ENSRNOT00000065911 UCSC:RGD:2303824
            ArrayExpress:F1M3F6 Uniprot:F1M3F6
        Length = 1113

 Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 65/191 (34%), Positives = 94/191 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R++         ++ E+   +  
Sbjct:    79 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAVPGR-----AEVTEQLAALVR 133

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   134 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLE 183

Query:   140 ESGEKSWGEFRKKNKSIISE-L-----------------FYGQLKSTVICCNCQETSSTF 181
              S      E      S ISE L                 F  Q +S++ C +C + S+TF
Sbjct:   184 GSTHGQGSEQLPPEASKISEDLRSSAAPPSLGPSFVQSHFQAQYRSSLTCPHCLKQSNTF 243

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   244 DPFLCVSLPIP 254


>UNIPROTKB|F1M2M9 [details] [associations]
            symbol:Usp43_predicted "Protein Usp43_predicted"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221 IPI:IPI00845884
            Ensembl:ENSRNOT00000004963 ArrayExpress:F1M2M9 Uniprot:F1M2M9
        Length = 1113

 Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 65/191 (34%), Positives = 94/191 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R++         ++ E+   +  
Sbjct:    79 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAVPGR-----AEVTEQLAALVR 133

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   134 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLE 183

Query:   140 ESGEKSWGEFRKKNKSIISE-L-----------------FYGQLKSTVICCNCQETSSTF 181
              S      E      S ISE L                 F  Q +S++ C +C + S+TF
Sbjct:   184 GSTHGQGSEQLPPEASKISEDLRSSAAPPSLGPSFVQSHFQAQYRSSLTCPHCLKQSNTF 243

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   244 DPFLCVSLPIP 254


>UNIPROTKB|F1LZN0 [details] [associations]
            symbol:Usp43_predicted "Ubiquitin carboxyl-terminal
            hydrolase" species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00952243 Ensembl:ENSRNOT00000066429
            ArrayExpress:F1LZN0 Uniprot:F1LZN0
        Length = 1118

 Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 65/191 (34%), Positives = 94/191 (49%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R++         ++ E+   +  
Sbjct:    79 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAVPGR-----AEVTEQLAALVR 133

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   134 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLE 183

Query:   140 ESGEKSWGEFRKKNKSIISE-L-----------------FYGQLKSTVICCNCQETSSTF 181
              S      E      S ISE L                 F  Q +S++ C +C + S+TF
Sbjct:   184 GSTHGQGSEQLPPEASKISEDLRSSAAPPSLGPSFVQSHFQAQYRSSLTCPHCLKQSNTF 243

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   244 DPFLCVSLPIP 254


>MGI|MGI:2444541 [details] [associations]
            symbol:Usp43 "ubiquitin specific peptidase 43" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:2444541 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 HSSP:P40818 eggNOG:COG5560 CTD:124739
            HOGENOM:HOG000293426 HOVERGEN:HBG094126 KO:K11856 OMA:RSISMKA
            OrthoDB:EOG4DR9BH EMBL:AL732570 EMBL:AK083271 EMBL:BC021474
            IPI:IPI00225521 IPI:IPI00788336 RefSeq:NP_776115.2
            UniGene:Mm.158885 ProteinModelPortal:Q8BUM9 MEROPS:C19.979
            PhosphoSite:Q8BUM9 PRIDE:Q8BUM9 Ensembl:ENSMUST00000021288
            GeneID:216835 KEGG:mmu:216835 UCSC:uc007jne.1
            GeneTree:ENSGT00680000099843 InParanoid:Q8BUM9 NextBio:375380
            Bgee:Q8BUM9 CleanEx:MM_USP43 Genevestigator:Q8BUM9
            GermOnline:ENSMUSG00000020905 Uniprot:Q8BUM9
        Length = 1132

 Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 65/191 (34%), Positives = 97/191 (50%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG  GLKN GNTC++N+++QCLSNT  L E+      R   AA  +   ++ E+   +  
Sbjct:    98 PGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYR---AAPGRA--EVTEQLAALVR 152

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLK 139
              LW   +R ++PQ       L  +FK  V K    F+G  Q D+ EFL  L+D +HEDL+
Sbjct:   153 ALW---TREYTPQ-------LSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLE 202

Query:   140 ESG-----EKSWGEFRKKNK-------------SIISELFYGQLKSTVICCNCQETSSTF 181
              S      E+   E  K ++             S +   F  Q +S++ C +C + S+TF
Sbjct:   203 GSAHGLVSEQLPPEVSKISEDLRPSAAPTSLGPSFVQSHFQAQYRSSLTCPHCLKQSNTF 262

Query:   182 EVFSNVSLPLP 192
             + F  VSLP+P
Sbjct:   263 DPFLCVSLPIP 273


>FB|FBgn0050421 [details] [associations]
            symbol:CG30421 species:7227 "Drosophila melanogaster"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 UCSC:CG30421-RA
            FlyBase:FBgn0050421 EMBL:AY060809 ProteinModelPortal:Q95SG4
            MEROPS:C19.A45 PRIDE:Q95SG4 InParanoid:Q95SG4 Bgee:Q95SG4
            Uniprot:Q95SG4
        Length = 1272

 Score = 218 (81.8 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 59/193 (30%), Positives = 93/193 (48%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIF 78
             PG+ GLKN GNTC++N++LQCLS+T  L EYFV + +K  +       S K   + +L  
Sbjct:   262 PGVMGLKNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKINSRKFGTKRELTE 321

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL 138
              +  A   +     K +  H     FK  V +    FR   Q D+ EFL  L+D +HEDL
Sbjct:   322 QL--ANVLKALWTCKNESDHST--SFKAVVDRYGTQFRSSTQHDAQEFLFWLLDKVHEDL 377

Query:   139 KESGEKSWGEFRKK-------------------NKSIISELFYGQLKSTVICCNCQETSS 179
               + ++ +   +                     N S +  +F  Q +S++ C  C++ S+
Sbjct:   378 NTASKRRYKSLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQSN 437

Query:   180 TFEVFSNVSLPLP 192
             TF+ F  +S+ LP
Sbjct:   438 TFDPFHCISVQLP 450


>ZFIN|ZDB-GENE-050227-1 [details] [associations]
            symbol:fbxl22 "F-box and leucine-rich repeat protein
            22" species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 ZFIN:ZDB-GENE-050227-1
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00390000003748 EMBL:CR391977 IPI:IPI00495297
            Ensembl:ENSDART00000088884 Bgee:E7FC36 Uniprot:E7FC36
        Length = 527

 Score = 210 (79.0 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 66/199 (33%), Positives = 98/199 (49%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYFV----TEFKRSMTAA----YSKTSG----KL 70
             TGL+NLGNTC++N+ILQ LSN      YF        +   TA     ++++ G     L
Sbjct:   163 TGLRNLGNTCFMNAILQSLSNIQVFSCYFKELPSVALRSGKTAGRRMYHTRSQGDSSVSL 222

Query:    71 AEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
              EEF+     LW G    FSP   F V           + K+  +FRGY+QQD+HEFL  
Sbjct:   223 VEEFRKTLCSLWQGSQTAFSPDALFYV-----------IWKIMPSFRGYQQQDAHEFLRY 271

Query:   130 LIDTLHEDLK--ESGEKS----------WGE---FRKKNKSIISELFYGQLKSTVICCNC 174
             L+D LH +++  ++G  S            E   F     +I++ +F G L++ V C  C
Sbjct:   272 LLDHLHREMQGNKNGSPSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVYCLIC 331

Query:   175 QETSSTFEVFSNVSLPLPS 193
                S  F+ F ++SL +P+
Sbjct:   332 GTESRKFDPFLDLSLDIPN 350


>RGD|1588758 [details] [associations]
            symbol:LOC689730 "similar to ubiquitin specific peptidase 17
            (homolog)" species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1588758 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
            IPI:IPI00557791 Ensembl:ENSRNOT00000042131 Uniprot:F1LVL3
        Length = 523

 Score = 135 (52.6 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
 Identities = 27/80 (33%), Positives = 48/80 (60%)

Query:   114 TFRGYEQQDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCN 173
             TF  + Q+D+HEFL   ++ +HE      ++S  E   K+ S+I ++F GQ++S + C +
Sbjct:   125 TFHKHRQEDAHEFLMFTLNAMHESCLRGCKQS--ETSSKDSSLIYDIFGGQMRSQIKCHH 182

Query:   174 CQETSSTFEVFSNVSLPLPS 193
             CQ T  +++ F N+ L + S
Sbjct:   183 CQGTLDSYDPFLNLFLDICS 202

 Score = 122 (48.0 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
 Identities = 24/74 (32%), Positives = 44/74 (59%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFN 79
             PG +GL+N+GN+CY+N++LQCL++T PL +Y +++ + S    Y +     A E  +  +
Sbjct:    49 PG-SGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQ-EHSQRCCYPEGCKMCAMEAHVTQS 106

Query:    80 MLWAGDSRYFSPQK 93
             +L +       P +
Sbjct:   107 LLHSHSGGVMKPSE 120


>UNIPROTKB|Q70EK9 [details] [associations]
            symbol:USP51 "Ubiquitin carboxyl-terminal hydrolase 51"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 KO:K11366 HOGENOM:HOG000007260
            HOVERGEN:HBG058014 OrthoDB:EOG48PMJS EMBL:AJ583823 EMBL:AL732358
            EMBL:BC035907 EMBL:BN000340 IPI:IPI00398738 RefSeq:NP_958443.1
            UniGene:Hs.40061 UniGene:Hs.607524 ProteinModelPortal:Q70EK9
            SMR:Q70EK9 MEROPS:C19.065 PhosphoSite:Q70EK9 DMDM:52000873
            PRIDE:Q70EK9 DNASU:158880 Ensembl:ENST00000500968 GeneID:158880
            KEGG:hsa:158880 UCSC:uc004dun.2 CTD:158880 GeneCards:GC0XM055511
            HGNC:HGNC:23086 HPA:HPA001942 neXtProt:NX_Q70EK9
            PharmGKB:PA134888611 InParanoid:Q70EK9 OMA:FISFPLE PhylomeDB:Q70EK9
            GenomeRNAi:158880 NextBio:87839 Bgee:Q70EK9 CleanEx:HS_USP51
            Genevestigator:Q70EK9 GermOnline:ENSG00000185295 Uniprot:Q70EK9
        Length = 711

 Score = 210 (79.0 bits), Expect = 5.3e-16, P = 5.3e-16
 Identities = 60/187 (32%), Positives = 97/187 (51%)

Query:    10 RIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK 69
             R K   +TVG  L GL NLGNTC++N I+Q L++   L+++F+++  + +  + S     
Sbjct:   352 RRKKSVYTVG--LRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC--- 406

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F+ +++G      P  +K+ H L+    E +        GY QQD+HEFL  
Sbjct:   407 LVCEMSSLFHAMYSGSRTPHIP--YKLLH-LIWIHAEHLA-------GYRQQDAHEFLIA 456

Query:   130 LIDTLHEDLKESGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNV 187
             ++D LH   K+  +    E    N    II ++F G L+S V C  C   S+T +   ++
Sbjct:   457 ILDVLHRHSKD--DSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDI 514

Query:   188 SLPLPSN 194
             SL LP +
Sbjct:   515 SLDLPGS 521


>UNIPROTKB|Q5JXD3 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase 11"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AL096791 UniGene:Hs.171501
            HGNC:HGNC:12609 ChiTaRS:USP11 IPI:IPI01015533 SMR:Q5JXD3
            MINT:MINT-1384809 Ensembl:ENST00000377078 Uniprot:Q5JXD3
        Length = 140

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 47/118 (39%), Positives = 62/118 (52%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSK-TSGKLAEEFQLI 77
             PG+ GL NLGNTC++NS LQCLSN   L EYF+   +   +         G++AE +  +
Sbjct:    33 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADL 92

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH 135
                 W+G  R   P  FK K   VG F  +       F GY+Q DS E L+ L+D LH
Sbjct:    93 VKQAWSGHHRSIVPHVFKNK---VGHFASQ-------FLGYQQHDSQELLSFLLDGLH 140


>UNIPROTKB|F1MTL6 [details] [associations]
            symbol:USP27X "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11366
            GeneTree:ENSGT00690000101718 CTD:389856 EMBL:DAAA02073086
            IPI:IPI00921773 RefSeq:NP_001138547.1 UniGene:Bt.88841
            Ensembl:ENSBTAT00000056161 GeneID:781718 KEGG:bta:781718
            OMA:YQCFVWC NextBio:20924995 Uniprot:F1MTL6
        Length = 438

 Score = 204 (76.9 bits), Expect = 8.6e-16, P = 8.6e-16
 Identities = 60/176 (34%), Positives = 89/176 (50%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R    +       L  E   +F  
Sbjct:    76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC---LVCEMSSLFRE 132

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             L++G+     P  +K+ H LV           R   GY QQD+HEFL   +D LH   K 
Sbjct:   133 LYSGNPSPHVP--YKLLH-LVWIHA-------RHLAGYRQQDAHEFLIAALDVLHRHCK- 181

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +       N    II ++F G L+S V C  C   S+T +   ++SL LP +
Sbjct:   182 -GDDAGKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236


>UNIPROTKB|F1RTR5 [details] [associations]
            symbol:LOC100519179 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 KO:K11366 GeneTree:ENSGT00690000101718
            OMA:FISFPLE EMBL:FP017286 RefSeq:XP_003135158.1 UniGene:Ssc.94644
            Ensembl:ENSSSCT00000013504 GeneID:100519179 KEGG:ssc:100519179
            Uniprot:F1RTR5
        Length = 710

 Score = 208 (78.3 bits), Expect = 8.6e-16, P = 8.6e-16
 Identities = 59/185 (31%), Positives = 94/185 (50%)

Query:    10 RIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK 69
             R K   +TVG  L GL NLGNTC++N I+Q L++   L+++F+++  + +  + S     
Sbjct:   351 RRKKSVYTVG--LRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC--- 405

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F+ +++G+     P  +K+ H L+    E +        GY QQD+HEFL  
Sbjct:   406 LVCEMSSLFHAMYSGNRTPHIP--YKLLH-LIWIHAEHLA-------GYRQQDAHEFLIA 455

Query:   130 LIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSL 189
             ++D LH   KE               II  +F G L+S V C  C   S+T +   ++SL
Sbjct:   456 ILDVLHRHSKEDSVGQEASNPNCCNCIIDHIFTGGLQSDVTCQVCHTVSTTIDPCWDISL 515

Query:   190 PLPSN 194
              LP +
Sbjct:   516 DLPGS 520


>UNIPROTKB|F1PHD5 [details] [associations]
            symbol:USP51 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            EMBL:AAEX03026345 OMA:YQCFVWC Ensembl:ENSCAFT00000025289
            Uniprot:F1PHD5
        Length = 514

 Score = 205 (77.2 bits), Expect = 9.9e-16, P = 9.9e-16
 Identities = 60/176 (34%), Positives = 89/176 (50%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R    +       L  E   +F  
Sbjct:   153 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC---LVCEMSSLFRE 209

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             L++G+     P  +K+ H LV           R   GY QQD+HEFL   +D LH   K 
Sbjct:   210 LYSGNPSPHVP--YKLLH-LVWIHA-------RHLAGYRQQDAHEFLIAALDVLHRHCK- 258

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +       N    II ++F G L+S V C  C   S+T +   ++SL LP +
Sbjct:   259 -GDDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 313


>UNIPROTKB|F1RW22 [details] [associations]
            symbol:LOC100515460 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OMA:YQCFVWC EMBL:FP085546 Ensembl:ENSSSCT00000013455 Uniprot:F1RW22
        Length = 523

 Score = 205 (77.2 bits), Expect = 1.0e-15, P = 1.0e-15
 Identities = 60/176 (34%), Positives = 89/176 (50%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R    +       L  E   +F  
Sbjct:   173 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC---LVCEMSSLFRE 229

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             L++G+     P  +K+ H LV           R   GY QQD+HEFL   +D LH   K 
Sbjct:   230 LYSGNPSPHVP--YKLLH-LVWIHA-------RHLAGYRQQDAHEFLIAALDVLHRHCK- 278

Query:   141 SGEKSWGEFRKKN--KSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
              G+ +       N    II ++F G L+S V C  C   S+T +   ++SL LP +
Sbjct:   279 -GDDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 333


>UNIPROTKB|A6NNY8 [details] [associations]
            symbol:USP27X "Ubiquitin carboxyl-terminal hydrolase 27"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AF238380 KO:K11366 HOVERGEN:HBG058014 EMBL:DR004246
            IPI:IPI00399220 RefSeq:NP_001138545.1 UniGene:Hs.143587
            ProteinModelPortal:A6NNY8 SMR:A6NNY8 IntAct:A6NNY8
            PhosphoSite:A6NNY8 PRIDE:A6NNY8 GeneID:389856 KEGG:hsa:389856
            UCSC:uc004dop.3 CTD:389856 GeneCards:GC0XP049646 H-InvDB:HIX0077135
            HGNC:HGNC:13486 neXtProt:NX_A6NNY8 PharmGKB:PA134993614
            InParanoid:A6NNY8 GenomeRNAi:389856 NextBio:103162
            CleanEx:HS_USP27X Genevestigator:A6NNY8 Uniprot:A6NNY8
        Length = 438

 Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 58/174 (33%), Positives = 85/174 (48%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R    +       L  E   +F  
Sbjct:    76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC---LVCEMSSLFRE 132

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             L++G+     P  +K+ H LV           R   GY QQD+HEFL   +D LH   K 
Sbjct:   133 LYSGNPSPHVP--YKLLH-LVWIHA-------RHLAGYRQQDAHEFLIAALDVLHRHCKG 182

Query:   141 SGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
                            II ++F G L+S V C  C   S+T +   ++SL LP +
Sbjct:   183 DDVGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236


>MGI|MGI:1859645 [details] [associations]
            symbol:Usp27x "ubiquitin specific peptidase 27, X
            chromosome" species:10090 "Mus musculus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1859645 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 KO:K11366
            GeneTree:ENSGT00690000101718 HOVERGEN:HBG058014 CTD:389856
            EMBL:AF229643 EMBL:AK028249 EMBL:AK030383 EMBL:AL663104
            IPI:IPI00224850 RefSeq:NP_062334.2 UniGene:Mm.483107
            UniGene:Mm.488988 ProteinModelPortal:Q8CEG8 SMR:Q8CEG8
            PhosphoSite:Q8CEG8 PRIDE:Q8CEG8 Ensembl:ENSMUST00000115744
            Ensembl:ENSMUST00000178293 GeneID:54651 KEGG:mmu:54651
            InParanoid:Q9JIG5 OrthoDB:EOG4VT5X3 NextBio:311508 Bgee:Q8CEG8
            Genevestigator:Q8CEG8 Uniprot:Q8CEG8
        Length = 438

 Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 58/174 (33%), Positives = 85/174 (48%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R    +       L  E   +F  
Sbjct:    76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC---LVCEMSSLFRE 132

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             L++G+     P  +K+ H LV           R   GY QQD+HEFL   +D LH   K 
Sbjct:   133 LYSGNPSPHVP--YKLLH-LVWIHA-------RHLAGYRQQDAHEFLIAALDVLHRHCKG 182

Query:   141 SGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
                            II ++F G L+S V C  C   S+T +   ++SL LP +
Sbjct:   183 DDVGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236


>RGD|1564628 [details] [associations]
            symbol:Usp27x "ubiquitin specific peptidase 27, X-linked"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1564628 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OrthoDB:EOG4VT5X3 IPI:IPI00362588 Ensembl:ENSRNOT00000003800
            Uniprot:D3ZGB0
        Length = 438

 Score = 202 (76.2 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 58/174 (33%), Positives = 85/174 (48%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNM 80
             GL GL NLGNTC++N I+Q L++T  LR++F+++  R    +       L  E   +F  
Sbjct:    76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC---LVCEMSSLFRE 132

Query:    81 LWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE 140
             L++G+     P  +K+ H LV           R   GY QQD+HEFL   +D LH   K 
Sbjct:   133 LYSGNPSPHVP--YKLLH-LVWIHA-------RHLAGYRQQDAHEFLIAALDVLHRHCKG 182

Query:   141 SGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSN 194
                            II ++F G L+S V C  C   S+T +   ++SL LP +
Sbjct:   183 DDVGKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236


>UNIPROTKB|K7EKZ1 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase 32"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001125 InterPro:IPR001394
            InterPro:IPR002048 InterPro:IPR006615 InterPro:IPR011992
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 Pfam:PF13202
            PRINTS:PR00450 PROSITE:PS00972 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            Gene3D:1.10.238.10 InterPro:IPR018247 HGNC:HGNC:19143 EMBL:AC025048
            EMBL:AC003962 EMBL:AC037475 EMBL:AC104763 Ensembl:ENST00000590133
            Uniprot:K7EKZ1
        Length = 847

 Score = 206 (77.6 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 47/129 (36%), Positives = 70/129 (54%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE---FKRSMTAAYSKTSGKLAEEFQLI 77
             G TGL NLGNTC++NS +QC+SNT PL +YF++    ++ + T       G +A+ +  +
Sbjct:   729 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGM-KGHMAKCYGDL 787

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
                LW+G  +  +P K +            + K    F G++QQDS E L  L+D LHED
Sbjct:   788 VQELWSGTQKNVAPLKLRWT----------IAKYAPRFNGFQQQDSQELLAFLLDGLHED 837

Query:   138 LKESGEKSW 146
             L    EK +
Sbjct:   838 LNRVHEKPY 846


>POMBASE|SPCC16A11.12c [details] [associations]
            symbol:ubp1 "ubiquitin C-terminal hydrolase Ubp1"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 PomBase:SPCC16A11.12c
            GO:GO:0005783 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5560 PIR:T41085
            RefSeq:NP_587999.1 ProteinModelPortal:Q9USM5 MEROPS:C19.A55
            EnsemblFungi:SPCC16A11.12c.1 GeneID:2539228 KEGG:spo:SPCC16A11.12c
            KO:K11870 OMA:MESITLE OrthoDB:EOG4Q887G NextBio:20800398
            Uniprot:Q9USM5
        Length = 849

 Score = 202 (76.2 bits), Expect = 5.0e-15, P = 5.0e-15
 Identities = 61/194 (31%), Positives = 96/194 (49%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKT---SGKLAEEFQL 76
             GL GL NLGN+CY+NS LQC+ +T  L +YF+++ +++ +   Y+      GK+A  +  
Sbjct:   277 GLCGLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDIN--YNNPLGMMGKVALSYAS 334

Query:    77 IFNMLW-AGDSRYFSPQKFKVKHELVGKFKEEVGKMKRT----FRGYEQQDSHEFLT-IL 130
             +  M+    D    SP  FK    ++G+F       ++     F  +     HE L  I 
Sbjct:   335 LLKMIHHTADMHSVSPSSFKF---IIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQ 391

Query:   131 IDTLHE--DLKES--------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSST 180
             I    E  DL +           + W    K+N SII +LF G  KST+ C  C + S+ 
Sbjct:   392 IKPYFERPDLFDEHPLHVQRVANQCWDIHTKRNDSIIVQLFQGMYKSTLECSICYQKSTA 451

Query:   181 FEVFSNVSLPLPSN 194
             F+ F  ++LPLP++
Sbjct:   452 FDPFMYLTLPLPTS 465


>TAIR|locus:2010622 [details] [associations]
            symbol:UBP2 "ubiquitin-specific protease 2" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS;IMP] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000502 "proteasome complex" evidence=TAS] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000502
            GO:GO:0006511 EMBL:AC004809 GO:GO:0004221 eggNOG:COG5533 KO:K11844
            HOGENOM:HOG000090316 EMBL:AF302659 EMBL:AY062463 IPI:IPI00535986
            PIR:H86181 RefSeq:NP_563719.1 UniGene:At.22815
            ProteinModelPortal:Q8W4N3 SMR:Q8W4N3 STRING:Q8W4N3 MEROPS:C19.090
            PaxDb:Q8W4N3 PRIDE:Q8W4N3 EnsemblPlants:AT1G04860.1 GeneID:839397
            KEGG:ath:AT1G04860 TAIR:At1g04860 InParanoid:Q8W4N3 OMA:TVSSTEC
            PhylomeDB:Q8W4N3 ProtClustDB:CLSN2916966 Genevestigator:Q8W4N3
            GermOnline:AT1G04860 Uniprot:Q8W4N3
        Length = 961

 Score = 202 (76.2 bits), Expect = 6.0e-15, P = 6.0e-15
 Identities = 57/172 (33%), Positives = 87/172 (50%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLW- 82
             GL NLGNTC+ NSI+Q L +   LR++F+ E         S   G LA   + +F     
Sbjct:   232 GLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENG-------SGVGGPLASSLRKLFTETKP 284

Query:    83 -AGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH-EDLKE 140
              AG     +P+ F       G F  +  +    FRGY+Q DSHE L  L+D+L  E+   
Sbjct:   285 EAGLKSVINPRAF------FGSFCSKAPQ----FRGYDQHDSHELLRCLLDSLSTEESAL 334

Query:   141 SGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLP 192
               ++   +  +K+ ++I  +F G+  S V C  C  +S  +E F ++SLP+P
Sbjct:   335 RKKRGVSDNDEKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSLPVP 386


>UNIPROTKB|F1S096 [details] [associations]
            symbol:LOC100738199 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0042393 "histone binding" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0016578 "histone deubiquitination" evidence=IEA] [GO:0006281
            "DNA repair" evidence=IEA] [GO:0000790 "nuclear chromatin"
            evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000102047 EMBL:CU550694
            Ensembl:ENSSSCT00000005040 OMA:ATAICAT ArrayExpress:F1S096
            Uniprot:F1S096
        Length = 291

 Score = 189 (71.6 bits), Expect = 7.1e-15, P = 7.1e-15
 Identities = 51/130 (39%), Positives = 69/130 (53%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMTAA----YSKTSG----KL 70
             TGL+NLGNTC++N+ILQ LSN      YF      E +   TA     ++++ G     L
Sbjct:    76 TGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSL 135

Query:    71 AEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
              EEF+     LW G    FSP+  F V           V K+   FRGY+QQD+HEF+  
Sbjct:   136 VEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGYQQQDAHEFMRY 184

Query:   130 LIDTLHEDLK 139
             L+D LH +L+
Sbjct:   185 LLDHLHLELQ 194

 Score = 138 (53.6 bits), Expect = 8.1e-08, P = 8.1e-08
 Identities = 46/150 (30%), Positives = 69/150 (46%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   125 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 173

Query:   119 EQQDSHEFLTILIDTLHEDL--------KESGEKSWGEFRKKNK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L        + S  +        NK       ++++ +F G
Sbjct:   174 QQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGG 233

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   234 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 263


>WB|WBGene00013506 [details] [associations]
            symbol:usp-3 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 EMBL:AL132902 GeneTree:ENSGT00690000102047
            MEROPS:C19.026 RefSeq:NP_493434.3 ProteinModelPortal:Q9GRV2
            SMR:Q9GRV2 PaxDb:Q9GRV2 EnsemblMetazoa:Y71A12B.9 GeneID:190579
            KEGG:cel:CELE_Y71A12B.9 UCSC:Y71A12B.9 CTD:190579
            WormBase:Y71A12B.9 HOGENOM:HOG000020065 NextBio:946258
            Uniprot:Q9GRV2
        Length = 550

 Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 56/186 (30%), Positives = 98/186 (52%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRS---MTAAYSKTSGK---LAEEFQLI 77
             G++N+GNTC++N++LQ L++ S  REY ++              K  G    L +E++  
Sbjct:   230 GMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEYR-- 287

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
               +L +  +R F       +     +F+E    +   FRG+ Q DSHEF+   +D+LH +
Sbjct:   288 -KLLISQSARSFR------EPTAPNEFREAFISVCPRFRGFRQHDSHEFMRYFMDSLHTE 340

Query:   138 LKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYC 197
             +++   K  G    K+  I S+ F G L+S+VIC  C+  S+  + F ++SL +P+    
Sbjct:   341 MRKC-RKLPGMPDDKHTPI-SKYFEGTLQSSVICQTCRNCSNKIDEFMDLSLDIPAQRNA 398

Query:   198 S-LRVS 202
             S +R+S
Sbjct:   399 SKVRLS 404


>UNIPROTKB|F1NQJ6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
            [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
            GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
            OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
            Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
        Length = 521

 Score = 193 (73.0 bits), Expect = 2.0e-14, P = 2.0e-14
 Identities = 59/178 (33%), Positives = 86/178 (48%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMTAA----YSKTSG----KL 70
             TGL+NLGNTC++N+ILQ LSN      YF      E +   TA     ++++ G     L
Sbjct:   158 TGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSL 217

Query:    71 AEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
              EEF+     LW G    FSP+  F V  +++  F           RGY+QQD+HEF+  
Sbjct:   218 VEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFSS---------RGYQQQDAHEFMRY 268

Query:   130 LIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNV 187
             L+D LH +L+       G F   ++S+I +       S+  C N   T  T  +F  +
Sbjct:   269 LLDHLHLELQ-------GGFNGVSRSVILQENSSLTASSKCCINGASTVVT-AIFGGI 318

 Score = 134 (52.2 bits), Expect = 9.9e-07, P = 9.9e-07
 Identities = 44/150 (29%), Positives = 69/150 (46%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V  +++  F           RGY
Sbjct:   207 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFSS---------RGY 257

Query:   119 EQQDSHEFLTILIDTLHEDLKES-GEKSWGEFRKKNKS--------------IISELFYG 163
             +QQD+HEF+  L+D LH +L+      S     ++N S              +++ +F G
Sbjct:   258 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLTASSKCCINGASTVVTAIFGG 317

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   318 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 347


>UNIPROTKB|H0YLB7 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            ProteinModelPortal:H0YLB7 SMR:H0YLB7 Ensembl:ENST00000559711
            Bgee:H0YLB7 Uniprot:H0YLB7
        Length = 431

 Score = 190 (71.9 bits), Expect = 2.8e-14, P = 2.8e-14
 Identities = 55/148 (37%), Positives = 75/148 (50%)

Query:     5 TFISYRIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMT 60
             T  S  +K+   T     TGL+NLGNTC++N+ILQ LSN      YF      E +   T
Sbjct:    52 TLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKT 111

Query:    61 AA----YSKTSG----KLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKM 111
             A     ++++ G     L EEF+     LW G    FSP+  F V           V K+
Sbjct:   112 AGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKI 160

Query:   112 KRTFRGYEQQDSHEFLTILIDTLHEDLK 139
                FRGY+QQD+HEF+  L+D LH +L+
Sbjct:   161 MPNFRGYQQQDAHEFMRYLLDHLHLELQ 188

 Score = 137 (53.3 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   119 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 167

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SGEKSWGEFRKK------NK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L+   +G       ++       NK       ++++ +F G
Sbjct:   168 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGG 227

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   228 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 257


>ZFIN|ZDB-GENE-030131-5739 [details] [associations]
            symbol:usp42 "ubiquitin specific peptidase 42"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-030131-5739 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
            EMBL:CR932017 IPI:IPI00506707 Ensembl:ENSDART00000003375
            ArrayExpress:F1QSB4 Bgee:F1QSB4 Uniprot:F1QSB4
        Length = 1047

 Score = 196 (74.1 bits), Expect = 2.9e-14, P = 2.9e-14
 Identities = 55/177 (31%), Positives = 88/177 (49%)

Query:    16 WTVGPGL-TGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEF 74
             W  G  +  GL NLGNTC++NS LQCL+ T+PL  Y +T  + S T            + 
Sbjct:   106 WNQGHRIGAGLHNLGNTCFLNSTLQCLTYTAPLANYMLTR-EHSKTCHEPGFCMMCTMQN 164

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
              +I   ++A       P    V +EL     + +GK    FR   Q+D+HEFL   +D +
Sbjct:   165 HII--QVFANSGNVIKP--ISVLNEL-----KRIGKH---FRFGSQEDAHEFLRYTVDAM 212

Query:   135 HEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
              +     G K   + + +  + + ++F G L+S V C NC+  S TF+ + ++SL +
Sbjct:   213 QKSCLP-GNKL--DRQTQATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEI 266


>UNIPROTKB|H0YKU8 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            Ensembl:ENST00000559257 Uniprot:H0YKU8
        Length = 443

 Score = 190 (71.9 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 55/148 (37%), Positives = 75/148 (50%)

Query:     5 TFISYRIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMT 60
             T  S  +K+   T     TGL+NLGNTC++N+ILQ LSN      YF      E +   T
Sbjct:    64 TLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKT 123

Query:    61 AA----YSKTSG----KLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKM 111
             A     ++++ G     L EEF+     LW G    FSP+  F V           V K+
Sbjct:   124 AGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKI 172

Query:   112 KRTFRGYEQQDSHEFLTILIDTLHEDLK 139
                FRGY+QQD+HEF+  L+D LH +L+
Sbjct:   173 MPNFRGYQQQDAHEFMRYLLDHLHLELQ 200

 Score = 137 (53.3 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   131 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 179

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SGEKSWGEFRKK------NK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L+   +G       ++       NK       ++++ +F G
Sbjct:   180 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGG 239

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   240 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 269


>UNIPROTKB|Q6JHV3 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
            EMBL:AY461579 IPI:IPI01015614 SMR:Q6JHV3 STRING:Q6JHV3
            Ensembl:ENST00000268049 UCSC:uc002amh.3 Uniprot:Q6JHV3
        Length = 498

 Score = 190 (71.9 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 55/148 (37%), Positives = 75/148 (50%)

Query:     5 TFISYRIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMT 60
             T  S  +K+   T     TGL+NLGNTC++N+ILQ LSN      YF      E +   T
Sbjct:   119 TLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKT 178

Query:    61 AA----YSKTSG----KLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKM 111
             A     ++++ G     L EEF+     LW G    FSP+  F V           V K+
Sbjct:   179 AGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKI 227

Query:   112 KRTFRGYEQQDSHEFLTILIDTLHEDLK 139
                FRGY+QQD+HEF+  L+D LH +L+
Sbjct:   228 MPNFRGYQQQDAHEFMRYLLDHLHLELQ 255

 Score = 137 (53.3 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   186 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 234

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SGEKSWGEFRKK------NK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L+   +G       ++       NK       ++++ +F G
Sbjct:   235 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGG 294

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   295 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 324


>UNIPROTKB|H0YMI4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            HGNC:HGNC:12626 ChiTaRS:USP3 ProteinModelPortal:H0YMI4 SMR:H0YMI4
            Ensembl:ENST00000558285 Bgee:H0YMI4 Uniprot:H0YMI4
        Length = 503

 Score = 190 (71.9 bits), Expect = 4.0e-14, P = 4.0e-14
 Identities = 55/148 (37%), Positives = 75/148 (50%)

Query:     5 TFISYRIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMT 60
             T  S  +K+   T     TGL+NLGNTC++N+ILQ LSN      YF      E +   T
Sbjct:   124 TLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKT 183

Query:    61 AA----YSKTSG----KLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKM 111
             A     ++++ G     L EEF+     LW G    FSP+  F V           V K+
Sbjct:   184 AGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKI 232

Query:   112 KRTFRGYEQQDSHEFLTILIDTLHEDLK 139
                FRGY+QQD+HEF+  L+D LH +L+
Sbjct:   233 MPNFRGYQQQDAHEFMRYLLDHLHLELQ 260

 Score = 137 (53.3 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   191 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 239

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SGEKSWGEFRKK------NK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L+   +G       ++       NK       ++++ +F G
Sbjct:   240 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGG 299

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   300 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 329


>UNIPROTKB|Q9Y6I4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
            [GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
            "regulation of protein stability" evidence=IDA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
            evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
            GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
            EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
            EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
            EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
            RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
            ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
            MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
            DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
            GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
            GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
            neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
            InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
            Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
            GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
        Length = 520

 Score = 190 (71.9 bits), Expect = 4.3e-14, P = 4.3e-14
 Identities = 55/148 (37%), Positives = 75/148 (50%)

Query:     5 TFISYRIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMT 60
             T  S  +K+   T     TGL+NLGNTC++N+ILQ LSN      YF      E +   T
Sbjct:   141 TLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKT 200

Query:    61 AA----YSKTSG----KLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKM 111
             A     ++++ G     L EEF+     LW G    FSP+  F V           V K+
Sbjct:   201 AGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKI 249

Query:   112 KRTFRGYEQQDSHEFLTILIDTLHEDLK 139
                FRGY+QQD+HEF+  L+D LH +L+
Sbjct:   250 MPNFRGYQQQDAHEFMRYLLDHLHLELQ 277

 Score = 137 (53.3 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   208 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 256

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SGEKSWGEFRKK------NK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L+   +G       ++       NK       ++++ +F G
Sbjct:   257 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGG 316

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   317 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 346


>UNIPROTKB|F1N0I6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
            IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
        Length = 521

 Score = 190 (71.9 bits), Expect = 4.3e-14, P = 4.3e-14
 Identities = 51/130 (39%), Positives = 70/130 (53%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMTAA----YSKTSGK----L 70
             TGL+NLGNTC++N+ILQ LSN      YF      E +   TA     ++++ G+    L
Sbjct:   160 TGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGENNVSL 219

Query:    71 AEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
              EEF+     LW G    FSP+  F V           V K+   FRGY+QQD+HEF+  
Sbjct:   220 VEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGYQQQDAHEFMRY 268

Query:   130 LIDTLHEDLK 139
             L+D LH +L+
Sbjct:   269 LLDHLHLELQ 278

 Score = 140 (54.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 46/150 (30%), Positives = 70/150 (46%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +  + +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   209 TRSQGENNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 257

Query:   119 EQQDSHEFLTILIDTLHEDL--------KESGEKSWGEFRKKNK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L        + S  +        NK       ++++ +F G
Sbjct:   258 QQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGG 317

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   318 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 347


>MGI|MGI:2152450 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
            "Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
            protein stability" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
            HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
            CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
            UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
            PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
            Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
            UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
            CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
            Uniprot:Q91W36
        Length = 520

 Score = 189 (71.6 bits), Expect = 5.5e-14, P = 5.5e-14
 Identities = 51/130 (39%), Positives = 69/130 (53%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMTAA----YSKTSG----KL 70
             TGL+NLGNTC++N+ILQ LSN      YF      E +   TA     ++++ G     L
Sbjct:   159 TGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSL 218

Query:    71 AEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
              EEF+     LW G    FSP+  F V           V K+   FRGY+QQD+HEF+  
Sbjct:   219 VEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGYQQQDAHEFMRY 267

Query:   130 LIDTLHEDLK 139
             L+D LH +L+
Sbjct:   268 LLDHLHLELQ 277

 Score = 138 (53.6 bits), Expect = 2.6e-07, P = 2.6e-07
 Identities = 46/150 (30%), Positives = 72/150 (48%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +   ++  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   208 TRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 256

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SGEKSWGEFRKK------NK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L+   +G       ++       NK       ++++ +F G
Sbjct:   257 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGG 316

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   317 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 346


>UNIPROTKB|E2QZQ0 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
            EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
            Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
            NextBio:20861160 Uniprot:E2QZQ0
        Length = 520

 Score = 189 (71.6 bits), Expect = 5.5e-14, P = 5.5e-14
 Identities = 51/130 (39%), Positives = 69/130 (53%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMTAA----YSKTSG----KL 70
             TGL+NLGNTC++N+ILQ LSN      YF      E +   TA     ++++ G     L
Sbjct:   159 TGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSL 218

Query:    71 AEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
              EEF+     LW G    FSP+  F V           V K+   FRGY+QQD+HEF+  
Sbjct:   219 VEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGYQQQDAHEFMRY 267

Query:   130 LIDTLHEDLK 139
             L+D LH +L+
Sbjct:   268 LLDHLHLELQ 277

 Score = 137 (53.3 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 46/150 (30%), Positives = 71/150 (47%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +    +  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   208 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 256

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SGEKSWGEFRKK------NK-------SIISELFYG 163
             +QQD+HEF+  L+D LH +L+   +G       ++       NK       ++++ +F G
Sbjct:   257 QQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGG 316

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   317 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 346


>RGD|1308852 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
            "Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
            repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
            evidence=ISO] [GO:0031647 "regulation of protein stability"
            evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
            HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
            RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
            GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
            Genevestigator:Q4JL29 Uniprot:Q4JL29
        Length = 520

 Score = 187 (70.9 bits), Expect = 9.0e-14, P = 9.0e-14
 Identities = 51/130 (39%), Positives = 68/130 (52%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYF----VTEFKRSMTAA----YSKTSG----KL 70
             TGL+NLGNTC++N+ILQ LSN      YF      E +   TA     ++++ G     L
Sbjct:   159 TGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSL 218

Query:    71 AEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
              EEF+     LW G    FSP+  F V           V K+   FRGY QQD+HEF+  
Sbjct:   219 VEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGYRQQDAHEFMRY 267

Query:   130 LIDTLHEDLK 139
             L+D LH +L+
Sbjct:   268 LLDHLHLELQ 277

 Score = 137 (53.3 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 48/150 (32%), Positives = 71/150 (47%)

Query:    60 TAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQK-FKVKHELVGKFKEEVGKMKRTFRGY 118
             T +   ++  L EEF+     LW G    FSP+  F V           V K+   FRGY
Sbjct:   208 TRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYV-----------VWKIMPNFRGY 256

Query:   119 EQQDSHEFLTILIDTLHEDLKE--SG--------EKSWGEFRKK---N--KSIISELFYG 163
              QQD+HEF+  L+D LH +L+   +G        E S      K   N   ++++ +F G
Sbjct:   257 RQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSANNKCCINGASTVVTTIFGG 316

Query:   164 QLKSTVICCNCQETSSTFEVFSNVSLPLPS 193
              L++ V C  C   S  F+ F ++SL +PS
Sbjct:   317 ILQNEVNCLICGTESRKFDPFLDLSLDIPS 346


>GENEDB_PFALCIPARUM|PFE0835w [details] [associations]
            symbol:PFE0835w "ubiquitin carboxyl-terminal
            hydrolase 2, putative" species:5833 "Plasmodium falciparum"
            [GO:0016579 "protein deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            GO:GO:0016579 GO:GO:0004221 EMBL:AL844504 KO:K11835
            RefSeq:XP_001351724.1 ProteinModelPortal:Q8I3U1 IntAct:Q8I3U1
            MINT:MINT-1582960 EnsemblProtists:PFE0835w:mRNA GeneID:812982
            KEGG:pfa:PFE0835w EuPathDB:PlasmoDB:PF3D7_0516700
            HOGENOM:HOG000283724 OMA:NDINMNS ProtClustDB:CLSZ2431924
            Uniprot:Q8I3U1
        Length = 1332

 Score = 190 (71.9 bits), Expect = 1.7e-13, P = 1.7e-13
 Identities = 64/201 (31%), Positives = 95/201 (47%)

Query:    10 RIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKT-- 66
             RI  IF   G G  GL NLGNTC++NS LQCLS       YF+   F   +   YS    
Sbjct:   301 RISYIF-DKG-GDRGLINLGNTCFLNSSLQCLSKILKFSNYFLNGSFWNHIN--YSNPVG 356

Query:    67 -SGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEV-GKMKRTFR---GYEQQ 121
               G+LA+ +      +W  + R   P   KV  E + + ++E  G  +   +    +   
Sbjct:   357 QHGRLAKAYYETLTEMWKINKRD-CPYAPKVLKEAISEKRDEFYGYQQHDSQELLAFLLD 415

Query:   122 DSHEFLTILIDT-LHEDLKESG---------EKSWGEFRKKNKSIISELFYGQLKSTVIC 171
               HE L ++     +E+  + G         E SW   ++ N SII +LF GQ +S + C
Sbjct:   416 GLHEDLNLIRKKPYYEEKLQGGVDKLDVDVAEASWNRHKEINNSIIVDLFQGQYRSRLQC 475

Query:   172 CNCQETSSTFEVFSNVSLPLP 192
               C++ S TF+ F  +S+PLP
Sbjct:   476 PKCKKVSITFDPFMYLSIPLP 496


>UNIPROTKB|Q8I3U1 [details] [associations]
            symbol:PFE0835w "Ubiquitin carboxyl-terminal hydrolase"
            species:36329 "Plasmodium falciparum 3D7" [GO:0016579 "protein
            deubiquitination" evidence=ISS] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 EMBL:AL844504 KO:K11835 RefSeq:XP_001351724.1
            ProteinModelPortal:Q8I3U1 IntAct:Q8I3U1 MINT:MINT-1582960
            EnsemblProtists:PFE0835w:mRNA GeneID:812982 KEGG:pfa:PFE0835w
            EuPathDB:PlasmoDB:PF3D7_0516700 HOGENOM:HOG000283724 OMA:NDINMNS
            ProtClustDB:CLSZ2431924 Uniprot:Q8I3U1
        Length = 1332

 Score = 190 (71.9 bits), Expect = 1.7e-13, P = 1.7e-13
 Identities = 64/201 (31%), Positives = 95/201 (47%)

Query:    10 RIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKT-- 66
             RI  IF   G G  GL NLGNTC++NS LQCLS       YF+   F   +   YS    
Sbjct:   301 RISYIF-DKG-GDRGLINLGNTCFLNSSLQCLSKILKFSNYFLNGSFWNHIN--YSNPVG 356

Query:    67 -SGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEV-GKMKRTFR---GYEQQ 121
               G+LA+ +      +W  + R   P   KV  E + + ++E  G  +   +    +   
Sbjct:   357 QHGRLAKAYYETLTEMWKINKRD-CPYAPKVLKEAISEKRDEFYGYQQHDSQELLAFLLD 415

Query:   122 DSHEFLTILIDT-LHEDLKESG---------EKSWGEFRKKNKSIISELFYGQLKSTVIC 171
               HE L ++     +E+  + G         E SW   ++ N SII +LF GQ +S + C
Sbjct:   416 GLHEDLNLIRKKPYYEEKLQGGVDKLDVDVAEASWNRHKEINNSIIVDLFQGQYRSRLQC 475

Query:   172 CNCQETSSTFEVFSNVSLPLP 192
               C++ S TF+ F  +S+PLP
Sbjct:   476 PKCKKVSITFDPFMYLSIPLP 496


>TAIR|locus:2046392 [details] [associations]
            symbol:UBP1 "ubiquitin-specific protease 1" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AC003974 eggNOG:COG5560 KO:K11844 EMBL:AF302658
            IPI:IPI00548853 PIR:T00790 RefSeq:NP_565753.1 UniGene:At.38022
            ProteinModelPortal:Q9FPT5 SMR:Q9FPT5 MEROPS:C19.091
            EnsemblPlants:AT2G32780.1 GeneID:817839 KEGG:ath:AT2G32780
            TAIR:At2g32780 HOGENOM:HOG000090316 InParanoid:Q9FPT5 OMA:FFDEPEI
            PhylomeDB:Q9FPT5 ProtClustDB:CLSN2917217 Genevestigator:Q9FPT5
            GermOnline:AT2G32780 Uniprot:Q9FPT5
        Length = 1083

 Score = 188 (71.2 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 60/181 (33%), Positives = 90/181 (49%)

Query:    19 GPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIF 78
             G  + GL NLGNTC+ NS++Q L +   LRE+F+   K  ++      SG L    + +F
Sbjct:   198 GYAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFL---KEDLSV-----SGPLVSSLKELF 249

Query:    79 NMLWAGDSRYFSPQKFKVK-HELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLH-E 136
                 A  +   S  + ++   +L   F   V      FRGY+Q DSHE L  L+D L  E
Sbjct:   250 ----AESNSEASVFRNEINPRDLF--FS--VCSQAPQFRGYQQHDSHELLRCLLDGLSIE 301

Query:   137 DL---KESGEKSWGEFRKKNK-SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLP 192
             +    K+ G     +     K ++I  +F G++ STV C  C   S  +E F ++SLP+P
Sbjct:   302 ESSLRKKLGVSDSNDSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPVP 361

Query:   193 S 193
             S
Sbjct:   362 S 362


>DICTYBASE|DDB_G0274827 [details] [associations]
            symbol:DDB_G0274827 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0274827 GO:GO:0008234 EMBL:AAFI02000012
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 KO:K11855
            RefSeq:XP_643982.1 ProteinModelPortal:Q86J16
            EnsemblProtists:DDB0237738 GeneID:8619408 KEGG:ddi:DDB_G0274827
            OMA:SHEFIRF ProtClustDB:CLSZ2846888 Uniprot:Q86J16
        Length = 919

 Score = 187 (70.9 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 54/174 (31%), Positives = 86/174 (49%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYFVT-EFKRSMTAAYSKTSGKLAEEFQLIFNML 81
             +GL N+GNTC++NS+LQCL+ T PL  + ++ E  R   A     SG     F  IF  L
Sbjct:   234 SGLNNVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQCQA-----SG-----F-CIFCSL 282

Query:    82 WAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKES 141
                +++     K   K     +    + K+  TFR   Q+DSHEF+  +I++L +     
Sbjct:   283 ---ETQVLQSHKCGGKSITPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESLQKVSLSK 339

Query:   142 GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSND 195
               K     R    ++I  +F G L+S V C  CQ  S+T++ F ++ + +   D
Sbjct:   340 YPKGSINHRDAMTTVIGSIFGGYLRSQVKCSQCQYESNTYDPFMDLCVDINQAD 393


>WB|WBGene00008441 [details] [associations]
            symbol:E01B7.1 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0010171 "body
            morphogenesis" evidence=IMP] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
            GO:GO:0040018 Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            GO:GO:0006511 GO:GO:0004221 EMBL:AL132898 KO:K11839
            GeneTree:ENSGT00670000097591 EMBL:Z83222 RefSeq:NP_507513.2
            ProteinModelPortal:G5EBW2 SMR:G5EBW2 EnsemblMetazoa:E01B7.1
            GeneID:180175 KEGG:cel:CELE_E01B7.1 CTD:180175 WormBase:E01B7.1
            OMA:PSLAYIL NextBio:908320 Uniprot:G5EBW2
        Length = 811

 Score = 186 (70.5 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 61/200 (30%), Positives = 95/200 (47%)

Query:    20 PGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSK--TSGKLAEEFQLI 77
             PG  GL N+GNTC++++ LQCL  T  L E F  +   S     S+  + G ++  F  +
Sbjct:   475 PGAVGLFNMGNTCFMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLGSKGVISAGFASL 534

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED 137
              +M+W G      P +F    +L   F + V +     R   Q D+ EF   L+D LHED
Sbjct:   535 SDMIWNGTFTAIRPSRFL---QL---FSDTVYQPLSDGR---QHDASEFQIFLLDALHED 585

Query:   138 LKE----SGEKSW----------GEFRKKNK----SIISELFYGQLKSTVICCNCQETSS 179
               +    S E+++           +F KK+     S ++ L      S + C  C  +S+
Sbjct:   586 TNQAQRISFEQNYHGGAGIAKEAADFLKKHYQFSLSPVNRLLGSITVSEIRCLTCGASSA 645

Query:   180 TFEVFSNVSLPLPSNDYCSL 199
             TFE  + +S+ +PSN  CSL
Sbjct:   646 TFEENTIISVEIPSNSSCSL 665


>TAIR|locus:2174403 [details] [associations]
            symbol:UBP23 "ubiquitin-specific protease 23"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0009165 "nucleotide
            biosynthetic process" evidence=RCA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AB013396
            eggNOG:COG5077 HSSP:P54578 KO:K11855 EMBL:AF302671 IPI:IPI00532960
            RefSeq:NP_568873.1 UniGene:At.22531 ProteinModelPortal:Q9FPS4
            SMR:Q9FPS4 STRING:Q9FPS4 MEROPS:C19.A12 PaxDb:Q9FPS4 PRIDE:Q9FPS4
            EnsemblPlants:AT5G57990.1 GeneID:835910 KEGG:ath:AT5G57990
            GeneFarm:1994 TAIR:At5g57990 HOGENOM:HOG000078724 InParanoid:Q9FPS4
            OMA:AHEYMIN PhylomeDB:Q9FPS4 ProtClustDB:CLSN2716507
            Genevestigator:Q9FPS4 Uniprot:Q9FPS4
        Length = 859

 Score = 186 (70.5 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 55/184 (29%), Positives = 89/184 (48%)

Query:    13 IIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAE 72
             I F  +G    GL+NLGNTC++NS+LQCL+ T PL     T   +     Y   +G  A 
Sbjct:   100 ITFRKIG---AGLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQK----YCHVAGFCAL 152

Query:    73 -EFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILI 131
                Q         + R  +P+      +LV   +     + R FR   Q+D+HE++  L+
Sbjct:   153 CAIQKHVRTARQANGRILAPK------DLVSNLR----CISRNFRNCRQEDAHEYMINLL 202

Query:   132 DTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
             + +H+    SG  S      + +S++ ++F G L+S V C  C   S+ F+ F ++SL +
Sbjct:   203 ECMHKCSLPSGVPSESSDAYR-RSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI 261

Query:   192 PSND 195
                D
Sbjct:   262 SKAD 265


>UNIPROTKB|Q9H9J4 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5533 KO:K11855 OMA:ALHSENP EMBL:AJ601395 EMBL:AY618868
            EMBL:AC004895 EMBL:BC060846 EMBL:BC132862 EMBL:AK022759
            IPI:IPI00784612 IPI:IPI01009873 RefSeq:NP_115548.1 UniGene:Hs.31856
            ProteinModelPortal:Q9H9J4 SMR:Q9H9J4 IntAct:Q9H9J4 STRING:Q9H9J4
            MEROPS:C19.048 PhosphoSite:Q9H9J4 DMDM:85681903 PaxDb:Q9H9J4
            PRIDE:Q9H9J4 Ensembl:ENST00000306177 GeneID:84132 KEGG:hsa:84132
            UCSC:uc011jwo.1 UCSC:uc011jwp.2 CTD:84132 GeneCards:GC07P006144
            H-InvDB:HIX0006462 HGNC:HGNC:20068 HPA:HPA006752 neXtProt:NX_Q9H9J4
            PharmGKB:PA134902515 HOGENOM:HOG000236355 HOVERGEN:HBG080724
            InParanoid:Q9H9J4 OrthoDB:EOG4RV2RB GenomeRNAi:84132 NextBio:73425
            PMAP-CutDB:Q9H9J4 ArrayExpress:Q9H9J4 Bgee:Q9H9J4 CleanEx:HS_USP42
            Genevestigator:Q9H9J4 GermOnline:ENSG00000106346 Uniprot:Q9H9J4
        Length = 1324

 Score = 187 (70.9 bits), Expect = 3.6e-13, P = 3.6e-13
 Identities = 52/168 (30%), Positives = 87/168 (51%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL+NLGNTC+ N+ LQCL+ T PL  Y ++         +SKT    AE F ++  M  A
Sbjct:   112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-------EHSKTCH--AEGFCMMCTMQ-A 161

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESGE 143
               ++  S     +K   V     E+ ++ R FR   Q+D+HEFL   +D + +       
Sbjct:   162 HITQALSNPGDVIKPMFV---INEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSN 218

Query:   144 KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
             K   +   +  +++ ++F G L+S V C NC+  S TF+ + +++L +
Sbjct:   219 KL--DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI 264


>UNIPROTKB|E2RHU7 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11855
            GeneTree:ENSGT00670000097591 OMA:ALHSENP CTD:84132
            EMBL:AAEX03004287 RefSeq:XP_536882.2 Ensembl:ENSCAFT00000024838
            GeneID:479754 KEGG:cfa:479754 Uniprot:E2RHU7
        Length = 1331

 Score = 187 (70.9 bits), Expect = 3.6e-13, P = 3.6e-13
 Identities = 52/168 (30%), Positives = 87/168 (51%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL+NLGNTC+ N+ LQCL+ T PL  Y ++         +SKT    AE F ++  M  A
Sbjct:   112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-------EHSKTCH--AEGFCMMCTMQ-A 161

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESGE 143
               ++  S     +K   V     E+ ++ R FR   Q+D+HEFL   +D + +       
Sbjct:   162 HITQALSNPGDVIKPMFV---INEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSN 218

Query:   144 KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
             K   +   +  +++ ++F G L+S V C NC+  S TF+ + +++L +
Sbjct:   219 KL--DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI 264


>UNIPROTKB|E1B9W9 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AAFC03050082 IPI:IPI00711714
            UniGene:Bt.42050 Ensembl:ENSBTAT00000000967 OMA:ALHSENP
            Uniprot:E1B9W9
        Length = 1333

 Score = 187 (70.9 bits), Expect = 3.6e-13, P = 3.6e-13
 Identities = 52/168 (30%), Positives = 87/168 (51%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL+NLGNTC+ N+ LQCL+ T PL  Y ++         +SKT    AE F ++  M  A
Sbjct:   112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-------EHSKTCH--AEGFCMMCTMQ-A 161

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESGE 143
               ++  S     +K   V     E+ ++ R FR   Q+D+HEFL   +D + +       
Sbjct:   162 HITQALSNPGDVIKPMFV---INEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSN 218

Query:   144 KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
             K   +   +  +++ ++F G L+S V C NC+  S TF+ + +++L +
Sbjct:   219 KL--DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI 264


>FB|FBgn0013717 [details] [associations]
            symbol:not "non-stop" species:7227 "Drosophila melanogaster"
            [GO:0007412 "axon target recognition" evidence=IMP] [GO:0021782
            "glial cell development" evidence=IMP] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IGI]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0008347 "glial cell migration" evidence=IMP] [GO:0016579
            "protein deubiquitination" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006325 "chromatin organization"
            evidence=IMP] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0016578
            "histone deubiquitination" evidence=IMP] [GO:0007411 "axon
            guidance" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00355
            GO:GO:0007411 GO:GO:0045893 EMBL:AE014296 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 GO:GO:0006351 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008347
            GO:GO:0016578 GO:GO:0004221 GO:GO:0007412 eggNOG:COG5533
            GO:GO:0021782 EMBL:AF179590 EMBL:AY058707 RefSeq:NP_524140.2
            UniGene:Dm.2731 HSSP:P54578 ProteinModelPortal:Q9VVR1 SMR:Q9VVR1
            IntAct:Q9VVR1 MINT:MINT-6179419 STRING:Q9VVR1 MEROPS:C19.095
            PaxDb:Q9VVR1 PRIDE:Q9VVR1 GeneID:40030 KEGG:dme:Dmel_CG4166
            UCSC:CG4166-RB CTD:40030 FlyBase:FBgn0013717 InParanoid:Q9U6Q9
            KO:K11366 OrthoDB:EOG4M37QR GenomeRNAi:40030 NextBio:816633
            Bgee:Q9VVR1 Uniprot:Q9VVR1
        Length = 735

 Score = 183 (69.5 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 66/191 (34%), Positives = 93/191 (48%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGK-LAEEFQLIFN 79
             GL GL NLG TC++N I+Q L +T  L +YF+++  R      SK+S K L  E   +F 
Sbjct:   395 GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSD--RHDCG--SKSSHKCLVCEVSRLFQ 450

Query:    80 MLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHED-L 138
               ++G SR  SP      H L+      +    +   GYEQQD+HEF    +D LH   +
Sbjct:   451 EFYSG-SR--SPLSL---HRLL----HLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCV 500

Query:   139 K-----ESGEKSWGEFRKKNKS-------------IISELFYGQLKSTVICCNCQETSST 180
             K     ES   S G     N S             II ++F G L+S V+C  C   S+T
Sbjct:   501 KAKAEHESKSNSSGSGSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTT 560

Query:   181 FEVFSNVSLPL 191
             ++ F ++SL L
Sbjct:   561 YDPFWDISLDL 571


>TAIR|locus:2090985 [details] [associations]
            symbol:UBP25 "ubiquitin-specific protease 25"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0008234 GO:GO:0006511 EMBL:AB022220 GO:GO:0004221
            eggNOG:COG5077 HSSP:P54578 KO:K11855 EMBL:AF302673 EMBL:AY064992
            EMBL:BT021128 IPI:IPI00539796 RefSeq:NP_566486.1 UniGene:At.6074
            ProteinModelPortal:Q9FPS2 SMR:Q9FPS2 IntAct:Q9FPS2 MEROPS:C19.A13
            PRIDE:Q9FPS2 EnsemblPlants:AT3G14400.1 GeneID:820662
            KEGG:ath:AT3G14400 TAIR:At3g14400 HOGENOM:HOG000084095
            InParanoid:Q9FPS2 OMA:SEKAYIL PhylomeDB:Q9FPS2
            ProtClustDB:CLSN2688374 Genevestigator:Q9FPS2 Uniprot:Q9FPS2
        Length = 661

 Score = 182 (69.1 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 52/174 (29%), Positives = 80/174 (45%)

Query:    19 GPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIF 78
             GP L GL+NLGNTCY+NS+LQCL+ T PL  + +T    S    Y     K    F ++ 
Sbjct:    21 GPPL-GLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIV- 78

Query:    79 NMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHE-D 137
                   + R        +  +   K    +      F+   Q+D+HEFL  +ID  H   
Sbjct:    79 ------EKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTS 132

Query:   138 LKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
             L+    +  G       S++ E+F G L+S V C +C   S+  +   ++SL +
Sbjct:   133 LRLKKLRYNGNEPFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEI 186


>SGD|S000004836 [details] [associations]
            symbol:UBP8 "Ubiquitin-specific protease that is a component
            of the SAGA complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0000124 "SAGA complex" evidence=IDA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IMP] [GO:0046695
            "SLIK (SAGA-like) complex" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0032947 "protein complex scaffold" evidence=IMP;IDA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0034729 "histone H3-K79 methylation"
            evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
            [GO:0071819 "DUBm complex" evidence=IDA] [GO:0016578 "histone
            deubiquitination" evidence=IMP] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 SGD:S000004836 GO:GO:0006355 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006351 EMBL:BK006946 GO:GO:0000124
            GO:GO:0046695 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0032947 GO:GO:0051568 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 EMBL:Z49939 eggNOG:COG5533 KO:K11366 PDB:3M99
            PDB:3MHH PDB:3MHS PDB:4FIP PDB:4FJC PDB:4FK5 PDBsum:3M99
            PDBsum:3MHH PDBsum:3MHS PDBsum:4FIP PDBsum:4FJC PDBsum:4FK5
            GO:GO:0071819 GO:GO:0034729 GeneTree:ENSGT00690000101718
            OrthoDB:EOG4X3M8J PIR:S57591 RefSeq:NP_013950.1
            ProteinModelPortal:P50102 SMR:P50102 DIP:DIP-1506N IntAct:P50102
            MINT:MINT-393758 STRING:P50102 MEROPS:C19.087 PaxDb:P50102
            PeptideAtlas:P50102 EnsemblFungi:YMR223W GeneID:855263
            KEGG:sce:YMR223W CYGD:YMR223w HOGENOM:HOG000216626 OMA:KANEDWS
            EvolutionaryTrace:P50102 NextBio:978861 Genevestigator:P50102
            GermOnline:YMR223W Uniprot:P50102
        Length = 471

 Score = 179 (68.1 bits), Expect = 5.4e-13, P = 5.4e-13
 Identities = 52/182 (28%), Positives = 91/182 (50%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFK------RSMTAAYSKTSGKLAEEF 74
             GL+GL N+G+TC+++SILQCL +      + +++        RS    +S    K+  E 
Sbjct:   135 GLSGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHEL 194

Query:    75 QLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
                 N   A  S   + ++    + L   +K     + +   GY QQD+HEF   +I+ +
Sbjct:   195 YGALNTKQASSSSTSTNRQTGFIYLLTCAWK-----INQNLAGYSQQDAHEFWQFIINQI 249

Query:   135 HE----DLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETS-STFEVFSNVSL 189
             H+    DL  + E S     K+ + I+  +F G L+S+++C  CQ  S +T + F ++SL
Sbjct:   250 HQSYVLDLPNAKEVSRAN-NKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSL 308

Query:   190 PL 191
              +
Sbjct:   309 DI 310


>MGI|MGI:1924050 [details] [associations]
            symbol:Usp42 "ubiquitin specific peptidase 42" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=TAS] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1924050 GO:GO:0030154 EMBL:CH466529
            GO:GO:0008234 GO:GO:0007283 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 KO:K11855 GeneTree:ENSGT00670000097591
            OMA:ALHSENP CTD:84132 HOGENOM:HOG000236355 HOVERGEN:HBG080724
            OrthoDB:EOG4RV2RB EMBL:BC137852 IPI:IPI00352204 RefSeq:NP_084025.2
            UniGene:Mm.259620 ProteinModelPortal:B2RQC2 SMR:B2RQC2
            PhosphoSite:B2RQC2 PRIDE:B2RQC2 Ensembl:ENSMUST00000053287
            GeneID:76800 KEGG:mmu:76800 UCSC:uc009akp.1 InParanoid:B2RQC2
            NextBio:345843 Bgee:B2RQC2 Genevestigator:B2RQC2 Uniprot:B2RQC2
        Length = 1324

 Score = 185 (70.2 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 51/168 (30%), Positives = 85/168 (50%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL+NLGNTC+ N+ LQCL+ T PL  Y ++         +SKT    AE F ++  M   
Sbjct:   111 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-------EHSKTCH--AEGFCMMCTMQTH 161

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESGE 143
                   +P    +K   V     E+ ++ R FR   Q+D+HEFL   +D + +       
Sbjct:   162 ITQALSNPGDV-IKPMFV---INEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSN 217

Query:   144 KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
             K   +   +  +++ ++F G L+S V C NC+  S TF+ + +++L +
Sbjct:   218 KL--DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI 263


>RGD|1305231 [details] [associations]
            symbol:Usp42 "ubiquitin specific peptidase 42" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO;ISS]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1305231 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 EMBL:CH474012 GO:GO:0016579
            GO:GO:0004221 KO:K11855 GeneTree:ENSGT00670000097591 CTD:84132
            OrthoDB:EOG4RV2RB IPI:IPI00769124 RefSeq:NP_001099379.1
            UniGene:Rn.25011 Ensembl:ENSRNOT00000001404 GeneID:288482
            KEGG:rno:288482 NextBio:628152 Uniprot:D3ZU96
        Length = 1325

 Score = 185 (70.2 bits), Expect = 5.9e-13, P = 5.9e-13
 Identities = 51/168 (30%), Positives = 85/168 (50%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL+NLGNTC+ N+ LQCL+ T PL  Y ++         +SKT    AE F ++  M   
Sbjct:   111 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-------EHSKTCH--AEGFCMMCTMQTH 161

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESGE 143
                   +P    +K   V     E+ ++ R FR   Q+D+HEFL   +D + +       
Sbjct:   162 ITQALSNPGDV-IKPMFV---INEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSN 217

Query:   144 KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
             K   +   +  +++ ++F G L+S V C NC+  S TF+ + +++L +
Sbjct:   218 KL--DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI 263


>RGD|1308216 [details] [associations]
            symbol:Usp44 "ubiquitin specific peptidase 44" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0051322 "anaphase"
            evidence=IEA] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=IEA] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1308216
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0090231 EMBL:CH473960 GO:GO:0051322
            GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
            OrthoDB:EOG4XGZZK IPI:IPI00870073 RefSeq:NP_001101553.1
            UniGene:Rn.64954 Ensembl:ENSRNOT00000007465 GeneID:314746
            KEGG:rno:314746 UCSC:RGD:1308216 NextBio:668165 Uniprot:D4A251
        Length = 481

 Score = 119 (46.9 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
 Identities = 34/113 (30%), Positives = 55/113 (48%)

Query:    64 SKTSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDS 123
             S     L  E   +F ++W+G+    SP  F + H         V K+   FRGY QQD+
Sbjct:   376 SSPYSSLCHELHTLFQVMWSGEWALVSP--FAMLHS--------VWKLIPAFRGYAQQDA 425

Query:   124 HEFLTILIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKSTV 169
              EFL  L+D +  +L+ +G K       S     ++  ++++ +F+GQL S V
Sbjct:   426 QEFLCELLDKIQRELETTGTKLPALIPTSQRRLIEQVLNVVNNIFHGQLLSQV 478

 Score = 113 (44.8 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   266 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 300


>UNIPROTKB|E1C4I0 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:ALHSENP EMBL:AADN02023911
            IPI:IPI00603557 Ensembl:ENSGALT00000005338 Uniprot:E1C4I0
        Length = 1234

 Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 55/168 (32%), Positives = 83/168 (49%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL NLGNTC+INS LQCL+ T PL  Y ++  + + +  Y         E  +   +  A
Sbjct:   107 GLFNLGNTCFINSALQCLTYTPPLANYMLS-LEHTQSCNYQGFCMMCTMETHINRVLCCA 165

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESGE 143
              D+    P  F V HEL     + +GK    FR   Q+D+HEFL   +D + +       
Sbjct:   166 HDA--IKPA-FVV-HEL-----KRIGKH---FRFGAQEDAHEFLRFTVDAMQQACLHGCT 213

Query:   144 KSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
                 +   +  +II ++F G L+S V C NC+  S T+E F ++ L +
Sbjct:   214 IL--DRSSQATTIIHQIFGGFLRSRVKCLNCKAVSDTYEAFLDIPLDI 259


>UNIPROTKB|J9NSR8 [details] [associations]
            symbol:LOC609310 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 GeneTree:ENSGT00670000097591
            OMA:PELEECG EMBL:AAEX03010573 Ensembl:ENSCAFT00000038090
            Uniprot:J9NSR8
        Length = 531

 Score = 121 (47.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
 Identities = 24/77 (31%), Positives = 46/77 (59%)

Query:   115 FRGYEQQDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNC 174
             F  ++Q+D+HE+L  ++D + +      + S  E R ++ ++I +LF G  +S + C +C
Sbjct:   153 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPE-RPQDSTLIQQLFEGYWRSQIQCLHC 211

Query:   175 QETSSTFEVFSNVSLPL 191
             Q  SST E + ++SL +
Sbjct:   212 QGISSTLEPYLDISLDI 228

 Score = 108 (43.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
 Identities = 17/31 (54%), Positives = 25/31 (80%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTE 54
             GL+N+GNTCY+N+ LQCL+ T PL  Y +++
Sbjct:    81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQ 111


>DICTYBASE|DDB_G0274207 [details] [associations]
            symbol:DDB_G0274207 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0274207 GO:GO:0008234 EMBL:AAFI02000012
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5560 OMA:FFDEPEI
            RefSeq:XP_644261.1 ProteinModelPortal:Q86KB3
            EnsemblProtists:DDB0237696 GeneID:8619689 KEGG:ddi:DDB_G0274207
            Uniprot:Q86KB3
        Length = 1258

 Score = 179 (68.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 46/117 (39%), Positives = 63/117 (53%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLI 77
             +G G+ GL NLGNTC+ NSI+Q L++ + LR+ F+ E   + +  +S  SG L  E    
Sbjct:   155 IGDGIKGLDNLGNTCFFNSIMQNLTHLNILRDLFLREPGSTNSKIHS--SGPLTMEMYYF 212

Query:    78 FNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTL 134
             FN ++       SP          G F E   K  R FRG++QQDSHE L  L+D L
Sbjct:   213 FNKMYKSKQPRISPS---------GLFSEIARKSPR-FRGFKQQDSHELLRYLLDGL 259

 Score = 173 (66.0 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 52/147 (35%), Positives = 75/147 (51%)

Query:    55 FKRSMTAAYSK--TSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMK 112
             F R   +  SK  +SG L  E    FN ++       SP          G F E   K  
Sbjct:   188 FLREPGSTNSKIHSSGPLTMEMYYFFNKMYKSKQPRISPS---------GLFSEIARKSP 238

Query:   113 RTFRGYEQQDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICC 172
             R FRG++QQDSHE L  L+D L  + +++  K     R+K+ + I ++F GQL S ++C 
Sbjct:   239 R-FRGFKQQDSHELLRYLLDGLITE-EQNVTK-----RRKDPTYIDKVFGGQLISIIVCF 291

Query:   173 NCQETSSTFEVFSNVSLPLPSNDYCSL 199
              C   S T+E F ++SLP+PS +  SL
Sbjct:   292 RCGYHSKTYEPFLDLSLPIPSGNEQSL 318


>UNIPROTKB|I3LLE9 [details] [associations]
            symbol:USP46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:CU469206
            EMBL:FP325228 ProteinModelPortal:I3LLE9 Ensembl:ENSSSCT00000030149
            Uniprot:I3LLE9
        Length = 354

 Score = 168 (64.2 bits), Expect = 4.4e-12, P = 4.4e-12
 Identities = 60/184 (32%), Positives = 85/184 (46%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    24 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 73

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    74 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 129

Query:   143 -EKSWGEFR--------KKNK---SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +        + NK   + + E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   130 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 189

Query:   191 LPSN 194
             +  N
Sbjct:   190 VEQN 193


>UNIPROTKB|E1C8J6 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0007610
            "behavior" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:AADN02031293 KO:K11842
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH CTD:64854
            EMBL:AADN02031294 IPI:IPI00681234 RefSeq:XP_420711.1
            UniGene:Gga.10414 Ensembl:ENSGALT00000032088 GeneID:422758
            KEGG:gga:422758 NextBio:20825346 Uniprot:E1C8J6
        Length = 366

 Score = 168 (64.2 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 60/184 (32%), Positives = 85/184 (46%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L    P RE  V  +K     A  K    L      +F+ +  
Sbjct:    36 GLVNFGNTCYCNSVLQALYFCRPFREN-VLSYK-----AQQKKKENLLTCLADLFHSI-- 87

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    88 ------ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 141

Query:   143 -EKSWGEFR--------KKNKSIIS---ELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +        + NK  ++   E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   142 QEKQNGKLKNGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201

Query:   191 LPSN 194
             +  N
Sbjct:   202 VEQN 205


>UNIPROTKB|P62068 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0032228
            "regulation of synaptic transmission, GABAergic" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0007610 "behavior"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610
            GO:GO:0032228 EMBL:CH471057 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11842
            OrthoDB:EOG42Z4Q8 HPA:HPA007288 HOVERGEN:HBG054038 OMA:TEPTWVH
            EMBL:GU455414 EMBL:AK022614 EMBL:AK024318 EMBL:AK296493
            EMBL:AK299883 EMBL:AK302438 EMBL:BC037574 IPI:IPI00303458
            IPI:IPI00909695 IPI:IPI00935919 IPI:IPI00936274
            RefSeq:NP_001127695.1 RefSeq:NP_073743.2 UniGene:Hs.7966
            ProteinModelPortal:P62068 SMR:P62068 IntAct:P62068 STRING:P62068
            MEROPS:C19.052 DMDM:49065850 PRIDE:P62068 DNASU:64854
            Ensembl:ENST00000441222 Ensembl:ENST00000508499 GeneID:64854
            KEGG:hsa:64854 UCSC:uc003gzm.4 UCSC:uc003gzn.3 UCSC:uc011bzr.2
            UCSC:uc011bzs.2 CTD:64854 GeneCards:GC04M053376 HGNC:HGNC:20075
            MIM:612849 neXtProt:NX_P62068 PharmGKB:PA134922048
            InParanoid:P62068 GenomeRNAi:64854 NextBio:66987
            ArrayExpress:P62068 Bgee:P62068 CleanEx:HS_USP46
            Genevestigator:P62068 GermOnline:ENSG00000109189 Uniprot:P62068
        Length = 366

 Score = 168 (64.2 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 60/184 (32%), Positives = 85/184 (46%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    36 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 85

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    86 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 141

Query:   143 -EKSWGEFR--------KKNK---SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +        + NK   + + E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   142 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201

Query:   191 LPSN 194
             +  N
Sbjct:   202 VEQN 205


>UNIPROTKB|Q5RBQ4 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0007610 "behavior" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0032228
            "regulation of synaptic transmission, GABAergic" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 HSSP:Q93009
            KO:K11842 HOGENOM:HOG000231498 HOVERGEN:HBG054038 CTD:64854
            EMBL:CR858584 EMBL:CR858606 RefSeq:NP_001127337.1
            RefSeq:NP_001128936.1 UniGene:Pab.19202 UniGene:Pab.19798
            ProteinModelPortal:Q5RBQ4 SMR:Q5RBQ4 PRIDE:Q5RBQ4 GeneID:100174399
            GeneID:100189895 KEGG:pon:100174399 KEGG:pon:100189895
            InParanoid:Q5RBN2 Uniprot:Q5RBQ4
        Length = 366

 Score = 168 (64.2 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 60/184 (32%), Positives = 85/184 (46%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    36 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 85

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    86 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 141

Query:   143 -EKSWGEFR--------KKNK---SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +        + NK   + + E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   142 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201

Query:   191 LPSN 194
             +  N
Sbjct:   202 VEQN 205


>MGI|MGI:1916977 [details] [associations]
            symbol:Usp46 "ubiquitin specific peptidase 46" species:10090
            "Mus musculus" [GO:0001662 "behavioral fear response" evidence=IMP]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007610 "behavior"
            evidence=IMP] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0032228 "regulation of
            synaptic transmission, GABAergic" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1916977 GO:GO:0032228 GO:GO:0006511
            GO:GO:0001662 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5077 KO:K11842 GeneTree:ENSGT00650000093027
            HOGENOM:HOG000231498 OrthoDB:EOG42Z4Q8 HOVERGEN:HBG054038
            OMA:TEPTWVH MEROPS:C19.052 CTD:64854 EMBL:AK145298 EMBL:BC039916
            IPI:IPI00228384 RefSeq:NP_808229.1 UniGene:Mm.48795
            ProteinModelPortal:P62069 SMR:P62069 STRING:P62069 PaxDb:P62069
            PRIDE:P62069 Ensembl:ENSMUST00000068058 GeneID:69727 KEGG:mmu:69727
            InParanoid:Q3ULU5 NextBio:330198 Bgee:P62069 CleanEx:MM_USP46
            Genevestigator:P62069 GermOnline:ENSMUSG00000054814 Uniprot:P62069
        Length = 366

 Score = 168 (64.2 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 60/184 (32%), Positives = 85/184 (46%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    36 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 85

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    86 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 141

Query:   143 -EKSWGEFR--------KKNK---SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +        + NK   + + E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   142 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201

Query:   191 LPSN 194
             +  N
Sbjct:   202 VEQN 205


>RGD|1564751 [details] [associations]
            symbol:Usp50 "ubiquitin specific peptidase 50" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 Pfam:PF00443
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221 IPI:IPI00952069
            Ensembl:ENSRNOT00000064117 Uniprot:F1M3I6
        Length = 194

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 54/171 (31%), Positives = 79/171 (46%)

Query:    40 CLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHE 99
             C  N +  R +   +F     A Y     ++   F  +   +W GDS   SP       E
Sbjct:     2 CYRNMASHRPFPADDFG----AYYILDCSEVTTAFAYLMTDMWLGDSDCVSP-------E 50

Query:   100 LVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE-----SGEKSWGE--FRK- 151
             +   F   VG +   F    QQD+ EFL  +++ LHE LK+     + EK   +   RK 
Sbjct:    51 I---FLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRGRASEKRTAQNCCRKV 107

Query:   152 --KNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLPSNDYCSLR 200
                  SII+ LF GQL  ++ C  C+  +   EVF+ +SLP+PS   CSL+
Sbjct:   108 PAHETSIITRLFEGQLSYSITCLKCETCTYKNEVFTILSLPIPSEYECSLQ 158


>UNIPROTKB|F1NVC5 [details] [associations]
            symbol:USP12P1 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 EMBL:AADN02013537 IPI:IPI00590579
            Ensembl:ENSGALT00000022631 OMA:NCEAVSS ArrayExpress:F1NVC5
            Uniprot:F1NVC5
        Length = 375

 Score = 168 (64.2 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 59/183 (32%), Positives = 83/183 (45%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F R    AY K   +  E      + L+ 
Sbjct:    46 GLVNFGNTCYCNSVLQAL--------YFCRPF-REKVLAY-KVQPRKKESLLTCLSDLFN 95

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    96 S----IATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKK 151

Query:   143 -EKSWGEFR----------KKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPL 191
              EK  G+ +          K + + + E+F G L +   C NC+  SS  E F ++S+ +
Sbjct:   152 QEKQNGKLQNGSIESEEGDKTDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDV 211

Query:   192 PSN 194
               N
Sbjct:   212 EQN 214


>UNIPROTKB|F1MZM8 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0032228 "regulation of synaptic
            transmission, GABAergic" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0007610 "behavior"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GeneTree:ENSGT00650000093027
            OMA:TEPTWVH EMBL:DAAA02017666 EMBL:DAAA02017667 IPI:IPI00731835
            UniGene:Bt.25057 Ensembl:ENSBTAT00000004472 NextBio:20872216
            Uniprot:F1MZM8
        Length = 382

 Score = 168 (64.2 bits), Expect = 5.4e-12, P = 5.4e-12
 Identities = 60/184 (32%), Positives = 85/184 (46%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    52 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 101

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:   102 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 157

Query:   143 -EKSWGEFR--------KKNK---SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +        + NK   + + E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   158 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 217

Query:   191 LPSN 194
             +  N
Sbjct:   218 VEQN 221


>UNIPROTKB|E1C253 [details] [associations]
            symbol:USP31 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00680000099843 EMBL:AADN02023614
            IPI:IPI00682856 Ensembl:ENSGALT00000033662 Uniprot:E1C253
        Length = 810

 Score = 173 (66.0 bits), Expect = 5.9e-12, P = 5.9e-12
 Identities = 54/176 (30%), Positives = 81/176 (46%)

Query:    34 INSILQCLSNTSPLREYFVTEFKRSMT--AAYSKTSGKLAEEFQLIFNMLWAGDSRYFSP 91
             +N+ILQCLSNT    E+   E  R            G++ E+   +   LW  +   ++P
Sbjct:     1 MNAILQCLSNTELFAEFLALEQFRGPAEPGPPPPAPGEVTEQLAQLVRALWTLE---YTP 57

Query:    92 QKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKE----SGEKSW- 146
             Q  +        FK  V K    +RG  Q D+ EFL  L+D +HEDL      SG     
Sbjct:    58 QHSR-------DFKNIVSKNAMQYRGNAQHDAQEFLLWLLDRVHEDLNNVVNYSGMPPLK 110

Query:   147 ----------GEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLPLP 192
                       G     + + + ELF  Q +S++ C +CQ+ S+TF+ F  +SLP+P
Sbjct:   111 PPLEDDVLLEGPAFPISSTFVQELFQAQYRSSLTCPHCQKQSNTFDPFLCISLPIP 166


>UNIPROTKB|J9JHA0 [details] [associations]
            symbol:J9JHA0 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 OMA:QNLKTTK
            GeneTree:ENSGT00670000097591 EMBL:AAEX03012849
            Ensembl:ENSCAFT00000046526 Uniprot:J9JHA0
        Length = 376

 Score = 113 (44.8 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
 Identities = 21/77 (27%), Positives = 44/77 (57%)

Query:   115 FRGYEQQDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNC 174
             F  ++Q+D+HE+L  ++D + +      + S  +   ++ ++I  +F G  +S + C +C
Sbjct:    86 FHTHKQEDAHEYLMFILDAMQQACLPEDKPSDSQ-HAQDSTLIQHIFGGYWRSQIQCLHC 144

Query:   175 QETSSTFEVFSNVSLPL 191
             Q  SST E + ++SL +
Sbjct:   145 QSISSTLEPYLDISLDI 161

 Score = 108 (43.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
 Identities = 21/44 (47%), Positives = 30/44 (68%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTS 67
             GL+N+GNTCY+N+ LQCL+ T PL  Y +   ++  TA   +TS
Sbjct:    15 GLQNMGNTCYVNATLQCLTYTEPLASYML---QKHGTACRKQTS 55


>UNIPROTKB|J9P7S0 [details] [associations]
            symbol:USP31 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00680000099843
            EMBL:AAEX03004452 EMBL:AAEX03004453 Ensembl:ENSCAFT00000048254
            Uniprot:J9P7S0
        Length = 1131

 Score = 164 (62.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
 Identities = 54/185 (29%), Positives = 87/185 (47%)

Query:    34 INSILQCLSNTSPLREYFVT-EFKRSM----------TAAYSKTSGKLAEEFQLIFNMLW 82
             +N+ LQCLSNT    EY    +++                 ++  G++ E+   +   LW
Sbjct:     1 MNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPVGRGTQGQGEVTEQLAHLVRALW 60

Query:    83 AGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDL---- 138
               +   ++PQ  +        FK  V K    +RG  Q D+ EFL  L+D +HEDL    
Sbjct:    61 TLE---YTPQHSR-------DFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLNHAV 110

Query:   139 KESGEK-----SWGEFRKKNKSI------ISELFYGQLKSTVICCNCQETSSTFEVFSNV 187
             K+SG+      S  +   +  S       + ELF  Q +S++ C +CQ+ S+TF+ F  +
Sbjct:   111 KQSGQPPVKPPSETDMMPEGPSFPVCSTFVQELFQAQYRSSLTCPHCQKQSNTFDPFLCI 170

Query:   188 SLPLP 192
             SLP+P
Sbjct:   171 SLPIP 175

 Score = 36 (17.7 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query:   185 SNVSLPLPSNDYCSLRVSF 203
             S+V+ PL  ND C +R S+
Sbjct:   711 SSVTSPLAVNDNC-IRPSW 728


>UNIPROTKB|F1M625 [details] [associations]
            symbol:Usp46 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1564808 GO:GO:0007610
            GO:GO:0032228 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00650000093027 IPI:IPI00361813
            Ensembl:ENSRNOT00000002879 Uniprot:F1M625
        Length = 365

 Score = 166 (63.5 bits), Expect = 7.9e-12, P = 7.9e-12
 Identities = 59/184 (32%), Positives = 83/184 (45%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    35 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 84

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    85 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 140

Query:   143 -EKSWGEFRKKNKSI-----------ISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +  N +            + E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   141 QEKQNGKLKNGNMNEPAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 200

Query:   191 LPSN 194
             +  N
Sbjct:   201 VEQN 204


>RGD|1564808 [details] [associations]
            symbol:Usp46 "ubiquitin specific peptidase 46" species:10116
            "Rattus norvegicus" [GO:0001662 "behavioral fear response"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0007610 "behavior" evidence=ISO] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0032228 "regulation of
            synaptic transmission, GABAergic" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1564808 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 KO:K11842 CTD:64854 EMBL:GU455413
            RefSeq:NP_001178525.1 UniGene:Rn.12107 GeneID:289584
            KEGG:rno:289584 Uniprot:G8ACC6
        Length = 366

 Score = 166 (63.5 bits), Expect = 7.9e-12, P = 7.9e-12
 Identities = 59/184 (32%), Positives = 83/184 (45%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    36 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 85

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    86 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 141

Query:   143 -EKSWGEFRKKNKSI-----------ISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +  N +            + E+F G L +   C NC+  SS  E F ++S+ 
Sbjct:   142 QEKQNGKLKNGNMNEPAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 201

Query:   191 LPSN 194
             +  N
Sbjct:   202 VEQN 205


>ASPGD|ASPL0000046903 [details] [associations]
            symbol:AN2072 species:162425 "Emericella nidulans"
            [GO:0010992 "ubiquitin homeostasis" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0006275 "regulation of DNA
            replication" evidence=IEA] [GO:0010995 "free ubiquitin chain
            depolymerization" evidence=IEA] [GO:0043162 "ubiquitin-dependent
            protein catabolic process via the multivesicular body sorting
            pathway" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
            [GO:0000502 "proteasome complex" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0004175 "endopeptidase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 Pfam:PF00443 PROSITE:PS50235
            EMBL:BN001307 EMBL:AACD01000032 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 KO:K11839 OMA:YIVFYER
            RefSeq:XP_659676.1 ProteinModelPortal:Q5BBK8
            EnsemblFungi:CADANIAT00008742 GeneID:2875212 KEGG:ani:AN2072.2
            HOGENOM:HOG000183002 OrthoDB:EOG4FJCHV Uniprot:Q5BBK8
        Length = 1022

 Score = 173 (66.0 bits), Expect = 8.1e-12, P = 8.1e-12
 Identities = 48/188 (25%), Positives = 88/188 (46%)

Query:    23 TGLKNLGNTCYINSILQCLSNTSPLREYFVTE-FKRSMTAAYSKTSGKLAEEFQLIFNML 81
             TGL N G TCY+NS +QCLS T  + ++F+ + F+  +   +  + G +   +  +   L
Sbjct:   654 TGLANFGVTCYMNSTIQCLSATVLMSKFFIDDRFRFYVQKNWKGSQGVMPGLYANLIRSL 713

Query:    82 WAGDSRYFSPQKFK-VKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILID-------T 133
             W  D +   P  F+     L  ++  +  +  + F  +     HE L +          T
Sbjct:   714 WKNDVQVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNVNWQRTQLRPLT 773

Query:   134 LHEDLKES-------GEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFEVFSN 186
               E+++          +  W  +  + +S IS LF GQ  S + C  C+ TS+T+E F +
Sbjct:   774 FEEEMQRERMPVAKVSKIEWDRYCHREESFISSLFAGQHASRLRCTTCKRTSTTYEAFYS 833

Query:   187 VSLPLPSN 194
             +S+ +P++
Sbjct:   834 ISVEIPAS 841


>DICTYBASE|DDB_G0271798 [details] [associations]
            symbol:DDB_G0271798 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 dictyBase:DDB_G0271798
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 EMBL:AAFI02000006
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 KO:K11366 RefSeq:XP_645473.2
            EnsemblProtists:DDB0304675 GeneID:8618101 KEGG:ddi:DDB_G0271798
            OMA:RRTHKID Uniprot:Q55AP9
        Length = 836

 Score = 123 (48.4 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
 Identities = 33/78 (42%), Positives = 41/78 (52%)

Query:   115 FRGYEQQDSHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNC 174
             F GYEQQD+HEF    ++ +H      G    G   K    II   F G LKS V C  C
Sbjct:   455 FIGYEQQDAHEFFISSLNGIHS---HCG----GTTGKDCDCIIHCTFGGALKSEVSCLTC 507

Query:   175 QETSSTFEVFSNVSLPLP 192
             Q TSST + F ++SL +P
Sbjct:   508 QFTSSTSDPFIDISLDIP 525

 Score = 103 (41.3 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query:    21 GLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKR 57
             GL GL NLGNTC++NSILQ   +   LR YF+++  +
Sbjct:   248 GLRGLNNLGNTCFMNSILQSFLHNPLLRNYFLSDMHK 284


>UNIPROTKB|E2R587 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:AAEX03009057
            EMBL:AAEX03009058 Ensembl:ENSCAFT00000039391 Uniprot:E2R587
        Length = 355

 Score = 165 (63.1 bits), Expect = 9.5e-12, P = 9.5e-12
 Identities = 60/184 (32%), Positives = 84/184 (45%)

Query:    24 GLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAYSKTSGKLAEEFQLIFNMLWA 83
             GL N GNTCY NS+LQ L        YF   F+ ++ A Y K   K  E        L+ 
Sbjct:    26 GLVNFGNTCYCNSVLQAL--------YFCRPFRENVLA-Y-KAQQKKKENLLTCLADLFH 75

Query:    84 GDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTILIDTLHEDLKESG- 142
                   + QK KV      KF   + K    F  Y QQD+HEFL  L++T+ + L+E   
Sbjct:    76 S----IATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 131

Query:   143 -EKSWGEFR--------KKNK---SIISELFYGQLKSTVICCNCQETSSTFEVFSNVSLP 190
              EK  G+ +        + NK   + + E+F G L +   C NC+  SS  E F  +S+ 
Sbjct:   132 QEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLALSVD 191

Query:   191 LPSN 194
             +  N
Sbjct:   192 VEQN 195


>POMBASE|SPCC1682.12c [details] [associations]
            symbol:ubp16 "ubiquitin C-terminal hydrolase Ubp16"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PomBase:SPCC1682.12c GO:GO:0005730
            EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 HSSP:P54578
            OrthoDB:EOG4JHGQN KO:K11855 PIR:T41069 RefSeq:NP_587805.1
            ProteinModelPortal:O74442 MEROPS:C19.A66
            EnsemblFungi:SPCC1682.12c.1 GeneID:2538947 KEGG:spo:SPCC1682.12c
            OMA:YSHETEN NextBio:20800122 Uniprot:O74442
        Length = 457

 Score = 167 (63.8 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 41/187 (21%), Positives = 91/187 (48%)

Query:     4 ITFISYRIKIIFWTVGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFVTEFKRSMTAAY 63
             I F   ++ + +  + P   GL NLGNTC++NS+LQ ++ T PL +Y ++  + S++   
Sbjct:   106 ILFPEEKLSMEWDNIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSG-QHSLSCRM 164

Query:    64 SK-TSGKLAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQD 122
             +     ++ +     +       +  F P   +   +++             FR Y Q+D
Sbjct:   165 NACVLCRMEQHVARAYPNKGTKRASAFKPSGIQSMLKVISSH----------FRPYRQED 214

Query:   123 SHEFLTILIDTLHEDLKESGEKSWGEFRKKNKSIISELFYGQLKSTVICCNCQETSSTFE 182
             +HEF+  L+D   +   ++ +    +   +  S++  +F G L+  ++C  C++ S+T++
Sbjct:   215 AHEFMRYLVDAWQKSCLQNHKNL--DHPSRETSVVHRIFGGYLRQQILCSVCKKPSNTYQ 272

Query:   183 VFSNVSL 189
                ++S+
Sbjct:   273 ALLDLSV 279


>UNIPROTKB|F8VRI7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC018475 HGNC:HGNC:20064
            IPI:IPI01022768 ProteinModelPortal:F8VRI7 SMR:F8VRI7
            Ensembl:ENST00000552440 ArrayExpress:F8VRI7 Bgee:F8VRI7
            Uniprot:F8VRI7
        Length = 496

 Score = 113 (44.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:    18 VGPGLTGLKNLGNTCYINSILQCLSNTSPLREYFV 52
             V PG+TGL+NLGNTCY+NS+LQ LS+    R+ F+
Sbjct:   268 VTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFL 302

 Score = 109 (43.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 31/105 (29%), Positives = 52/105 (49%)

Query:    70 LAEEFQLIFNMLWAGDSRYFSPQKFKVKHELVGKFKEEVGKMKRTFRGYEQQDSHEFLTI 129
             L  E   +F ++W+G     SP  F + H         V ++   FRGY QQD+ EFL  
Sbjct:   381 LCHELHTLFQVMWSGKWALVSP--FAMLHS--------VWRLIPAFRGYAQQDAQEFLCE 430

Query:   130 LIDTLHEDLKESGEK-------SWGEFRKKNKSIISELFYGQLKS 167
             L+D +  +L+ +G         S  +  K+  ++++ +F+GQL S
Sbjct:   431 LLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLS 475

WARNING:  HSPs involving 227 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      203       203   0.00092  111 3  11 22  0.45    32
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  477
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  181 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:08
  No. of threads or processors used:  24
  Search cpu time:  21.37u 0.07s 21.44t   Elapsed:  00:00:10
  Total cpu time:  21.42u 0.08s 21.50t   Elapsed:  00:00:18
  Start:  Thu Aug 15 13:01:46 2013   End:  Thu Aug 15 13:02:04 2013
WARNINGS ISSUED:  2

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