RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10712
         (75 letters)



>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas
          aeruginosa [TaxId: 287]}
          Length = 208

 Score = 23.5 bits (50), Expect = 2.9
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 8/53 (15%)

Query: 11 EGNFLKDKLKCPNCSTNLGAFDYVSGHKCP-----CKQQCVPFIHLVKSKIDI 58
           G  L +++  PN    +G + Y SG+        C +  +P    V  K+ I
Sbjct: 8  RGKLLSEQVSNPNIR--VGRYSYYSGYYHGHSFDDCARYLMPDRDDV-DKLVI 57


>d1dl6a_ g.41.3.1 (A:) Transcription initiation factor TFIIB,
          N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 58

 Score = 22.1 bits (47), Expect = 5.2
 Identities = 6/21 (28%), Positives = 10/21 (47%)

Query: 17 DKLKCPNCSTNLGAFDYVSGH 37
           ++ CPN    +   DY +G 
Sbjct: 10 PRVTCPNHPDAILVEDYRAGD 30


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.130    0.417 

Gapped
Lambda     K      H
   0.267   0.0519    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 279,839
Number of extensions: 10069
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 3
Length of query: 75
Length of database: 2,407,596
Length adjustment: 42
Effective length of query: 33
Effective length of database: 1,830,936
Effective search space: 60420888
Effective search space used: 60420888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.4 bits)