BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10717
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1
SV=2
Length = 1080
Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/97 (53%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Query: 8 RFTSDG-WCRKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ DG W +K QT+VDFP++NL++S+Y + ++ +Y+L++VSNHYG ++ GHYTAYC
Sbjct: 975 RFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKYNLFSVSNHYGGLDGGHYTAYC 1034
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFYMSF 101
+N +W+KFDD +VS+IS S V+S AAYILFY S
Sbjct: 1035 KNAARQRWFKFDDHEVSDISVSSVRSSAAYILFYTSL 1071
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1
SV=1
Length = 1118
Score = 102 bits (253), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/97 (54%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Query: 8 RFTSDG-WCRKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ DG W +K QT+VDFP++NL++S+Y + ++ +Y+L++VSNHYG ++ GHYTAYC
Sbjct: 1013 RFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYC 1072
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFYMSF 101
+N +W+KFDD +VS+IS S VKS AAYILFY S
Sbjct: 1073 KNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYTSL 1109
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + + R K T V+FP+ LNMSE+ N +R YDL AVSNHYG M GHYTAY
Sbjct: 827 RFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAYA 886
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+N N KWY FDDS+VS S ++ + AAY+LFY
Sbjct: 887 KNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFY 920
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + + R K T V+FP+ LNMSE+ N +R YDL AVSNHYG M GHYTAY
Sbjct: 827 RFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAYA 886
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+N N KWY FDDS+VS S ++ + AAY+LFY
Sbjct: 887 KNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFY 920
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + + R K T V+FPV LNMSE+ + +R YDL AVSNHYG M GHYTAY
Sbjct: 825 RFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRAARPYVYDLIAVSNHYGAMGVGHYTAYA 884
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+N N KWY FDDS VS S ++ + AAY+LFY
Sbjct: 885 KNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFY 918
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 96.3 bits (238), Expect = 5e-20, Method: Composition-based stats.
Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + + R K T V+FPV LNMSE+ + +R YDL AVSNHYG M GHYTAY
Sbjct: 826 RFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGAMGVGHYTAYA 885
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+N N KWY FDDS VS S ++ + AAY+LFY
Sbjct: 886 KNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFY 919
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 95.5 bits (236), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + + R K T V+FPV LNMSE+ + +R YDL AVSNHYG M GHYTAY
Sbjct: 827 RFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSNHYGAMGVGHYTAYA 886
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+N N KWY FDDS+VS ++ + AAY+LFY
Sbjct: 887 KNKLNGKWYYFDDSNVSLACEDQIVTKAAYVLFY 920
>sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana
GN=UBP8 PE=1 SV=2
Length = 871
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNSESRDV-RYDLYAVSNHYGTMESGHYTAYCRNNY-KWYK 74
K + VDFP+DNL++S Y + RY LYA+SNHYG+M GHYTAY + +WY
Sbjct: 783 KLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYVHHGGDRWYD 842
Query: 75 FDDSDVSEISASKVKSPAAYILFYMSFI 102
FDDS V +IS K+K+ AAY+LFY +
Sbjct: 843 FDDSHVHQISQEKIKTSAAYVLFYKRLV 870
>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 OS=Homo sapiens GN=USP31
PE=2 SV=2
Length = 1352
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 25/116 (21%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSE----------------------YTVNSESRDVR 44
RF +G R K Q V FP+ L+M+ Y + + D
Sbjct: 647 RFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYI 706
Query: 45 YDLYAVSNHYGTMESGHYTAYCRNNYK--WYKFDDSDVSEISASKVKSPAAYILFY 98
YDLYAV NH+GTM+ GHYTAYC+N+ WY FDDSDV ++S +V + AYILFY
Sbjct: 707 YDLYAVCNHHGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFY 762
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNSE-SRDVRYDLYAVSNHYGTMESGHYTAYCR--NNYKWY 73
K +T V+FP+ +L++++Y N S+ Y+LYA++NHYG M SGHYTA+ + ++ +WY
Sbjct: 829 KLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGSGHYTAHIKLLDDSRWY 888
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
FDDS +S I+ VKS AAY+LFY
Sbjct: 889 NFDDSHISHINEDDVKSGAAYVLFY 913
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + R K T VDFP+++L+MSE+ +N + RY+L AVSNHYG M GHYTA+
Sbjct: 837 RFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFA 896
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFYM 99
+N + KWY FDDS VS S ++ S AAY+LFY
Sbjct: 897 KNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQ 931
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + R K T VDFP+++L+MSE+ +N + RY+L AVSNHYG M GHYTA+
Sbjct: 808 RFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFA 867
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFYM 99
+N + KWY FDDS VS S ++ S AAY+LFY
Sbjct: 868 KNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQ 902
>sp|Q8R5K2|UBP33_MOUSE Ubiquitin carboxyl-terminal hydrolase 33 OS=Mus musculus GN=Usp33
PE=1 SV=2
Length = 909
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTV-NSESRDVRYDLYAVSNHYGTMESGHYTAYCRNNYK--WY 73
K T V FP++ L++ + +S ++ V YDL +V H+GT SGHY AYCRNN WY
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWY 654
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+S S V++ AY+LFY
Sbjct: 655 EFDDQSVTEVSESTVQNAEAYVLFY 679
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + R K T VDFP+ +L+MSE+ +N + RY+L AVSNHYG M GHYTA+
Sbjct: 808 RFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFA 867
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFYM 99
+N + KWY FDDS VS S ++ S AAY+LFY
Sbjct: 868 KNKDDGKWYYFDDSSVSSASEDQIVSKAAYVLFYQ 902
>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15
PE=2 SV=1
Length = 981
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + R K T VDFP+ +L+MSE+ +N + RY+L AVSNHYG M GHYTA+
Sbjct: 837 RFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFA 896
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFYM 99
+N + KWY FDDS VS S ++ S AAY+LFY
Sbjct: 897 KNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQ 931
>sp|Q8TEY7|UBP33_HUMAN Ubiquitin carboxyl-terminal hydrolase 33 OS=Homo sapiens GN=USP33
PE=1 SV=2
Length = 942
Score = 83.6 bits (205), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTV-NSESRDVRYDLYAVSNHYGTMESGHYTAYCRNNYK--WY 73
K T V FP++ L++ + +S ++ V YDL +V H+GT SGHY AYCRNN WY
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWY 687
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+S S V++ AY+LFY
Sbjct: 688 EFDDQSVTEVSESTVQNAEAYVLFY 712
>sp|Q5REG5|UBP33_PONAB Ubiquitin carboxyl-terminal hydrolase 33 OS=Pongo abelii GN=USP33
PE=2 SV=1
Length = 914
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTV-NSESRDVRYDLYAVSNHYGTMESGHYTAYCRNNYK--WY 73
K T V FP++ L++ + +S ++ V YDL +V H+GT SGHY AYCRNN WY
Sbjct: 596 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWY 655
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+S S V++ AY+LFY
Sbjct: 656 EFDDQSVTEVSESTVQNAEAYVLFY 680
>sp|Q28CN3|UBP33_XENTR Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis
GN=usp33 PE=2 SV=1
Length = 892
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTV-NSESRDVRYDLYAVSNHYGTMESGHYTAYCRNNYK--WY 73
K T V FP++ L++ + +S S+ V YDL +V H+GT SGHY AYCRNN WY
Sbjct: 578 KIGTHVSFPLEGLDLQPFLAKDSPSQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWY 637
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+S + V++ AY+LFY
Sbjct: 638 EFDDQSVTEVSEATVQNAEAYVLFY 662
>sp|P51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11
PE=1 SV=3
Length = 963
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRD----VRYDLYAVSNHYGTMESGHY 62
RF+ + R+K T V+FP+ +L+ SE+ + ++ +YDL AVSNHYG M GHY
Sbjct: 830 RFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHY 889
Query: 63 TAYC--RNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
T + +++ +W+ FDD+ VS ++ ++++S AAY+LFY
Sbjct: 890 TTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFY 927
>sp|A6QNM7|UBP33_BOVIN Ubiquitin carboxyl-terminal hydrolase 33 OS=Bos taurus GN=USP33
PE=2 SV=1
Length = 912
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTV-NSESRDVRYDLYAVSNHYGTMESGHYTAYCRNNYK--WY 73
K T V FP++ L++ + +S + V YDL +V H+GT SGHY AYCRNN WY
Sbjct: 598 KISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWY 657
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+S S V++ AY+LFY
Sbjct: 658 EFDDQSVTEVSESTVQNAEAYVLFY 682
>sp|Q8BUM9|UBP43_MOUSE Ubiquitin carboxyl-terminal hydrolase 43 OS=Mus musculus GN=Usp43
PE=2 SV=2
Length = 1132
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 26/117 (22%)
Query: 8 RFTSDGWCRKKQTT-VDFPVDNLNMSEY----TVNSES-------------------RDV 43
RF G R K +T V FP+ LNM+ + + NS++ D
Sbjct: 591 RFCQVGERRNKLSTLVKFPLSGLNMAPHVARRSTNSKAGPGPWSSWKQPICLPTTYPLDF 650
Query: 44 RYDLYAVSNHYGTMESGHYTAYCRNNY--KWYKFDDSDVSEISASKVKSPAAYILFY 98
YDLYAV NH+G+++ GHYTAYCRN+ +WY +DDS V + +V + AYILFY
Sbjct: 651 LYDLYAVCNHHGSLQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFY 707
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RFT + + K T V+FPV +L++S+Y N + Y+LYAVSNHYG + GHYTAY
Sbjct: 799 RFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGGHYTAYA 858
Query: 67 R--NNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+ ++ KWY FDDS VS ++ S++++ AAY+LFY
Sbjct: 859 KLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFY 892
>sp|Q70EL4|UBP43_HUMAN Ubiquitin carboxyl-terminal hydrolase 43 OS=Homo sapiens GN=USP43
PE=1 SV=2
Length = 1123
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 26/117 (22%)
Query: 8 RFTSDGWCRKKQTT-VDFPVDNLNMSEYTVNSESR-----------------------DV 43
RF G R K +T V FP+ LNM+ + + D
Sbjct: 591 RFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPDCLPTSYPLDF 650
Query: 44 RYDLYAVSNHYGTMESGHYTAYCRNNY--KWYKFDDSDVSEISASKVKSPAAYILFY 98
YDLYAV NH+G ++ GHYTAYCRN+ +WY +DDS V + +V + AYILFY
Sbjct: 651 LYDLYAVCNHHGNLQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFY 707
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 16 RKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYCRNNYK--WY 73
RK +T + +P+ NL+++ Y + +Y+L AV NH+G ++ GHYTA+C+N++ WY
Sbjct: 277 RKLRTDIHYPLTNLDLTPYICPIFRKYPKYNLCAVVNHFGDLDGGHYTAFCKNSFTQAWY 336
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
FDD+ VSEI + V++ AY+LFY
Sbjct: 337 SFDDTRVSEIPDTSVQNATAYLLFY 361
>sp|Q99K46|UBP11_MOUSE Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11
PE=2 SV=4
Length = 921
Score = 80.5 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTV---NSESRDV-RYDLYAVSNHYGTMESGHY 62
RF+ R+K T V FP+ +L+ SE+ + N S D+ +YDL AVSNHYG M GHY
Sbjct: 789 RFSFSKISREKLDTLVQFPIRDLDFSEFVIKPKNESSPDLYKYDLIAVSNHYGGMRDGHY 848
Query: 63 TAYC--RNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
T + +++ +W+ FDD+ VS ++ ++++S AAY+LFY
Sbjct: 849 TTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFY 886
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RFT + + K T V+FPV +L++S+Y N + Y+LYAVSNHYG + GHYTAY
Sbjct: 798 RFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYA 857
Query: 67 R--NNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+ ++ +WY FDDS VS ++ S++K+ AAY+LFY
Sbjct: 858 KLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFY 891
>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
GN=Usp50 PE=2 SV=1
Length = 390
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 16 RKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYCRNNYK--WY 73
RK +T + +P+ NL+++ Y + Y+L AV NH+G ++ GHYTA+C+N+ WY
Sbjct: 276 RKLRTDIHYPLTNLDLTPYICPVFRKHPMYNLCAVVNHFGDLDGGHYTAFCKNSVTQAWY 335
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
FDD+ VSEI + V++ AY+LFY
Sbjct: 336 SFDDTRVSEIPDTSVQTATAYLLFY 360
>sp|A5PMR2|UBP33_DANRE Ubiquitin carboxyl-terminal hydrolase 33 OS=Danio rerio GN=usp33
PE=2 SV=1
Length = 897
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTV-NSESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWY 73
K T V FP++ L M + +S + YDL +V H+GT SGHY AYCRN N WY
Sbjct: 583 KIGTHVSFPLEGLEMQPFLAKDSSALTTTYDLLSVICHHGTASSGHYIAYCRNELNQLWY 642
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+S S V++ AY+LFY
Sbjct: 643 EFDDQSVTEVSESCVQNAEAYVLFY 667
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 7 HRF-TSDGWCRKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAY 65
+RF TS G +K VDFP+ L++ ++ + V Y LYA+ NH G++ GHYTA
Sbjct: 465 NRFSTSRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPV-YQLYALCNHSGSVHYGHYTAL 523
Query: 66 CRNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
CR W+ ++DS VS +S ++V S Y+LFY
Sbjct: 524 CRCQTGWHVYNDSRVSPVSENQVASSEGYVLFY 556
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWYK 74
K T V+FP+ +L++ E+ + + V Y+LYAVSNH GT GHYTAYCR+ +W+
Sbjct: 514 KLTTFVNFPLRDLDLREFASENTNHAV-YNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHT 572
Query: 75 FDDSDVSEISASKVKSPAAYILFY 98
F+DS V+ +S+S+V++ AY+LFY
Sbjct: 573 FNDSSVTPMSSSQVRTSDAYLLFY 596
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWYK 74
K T V+FP+ +L++ E+ S + V Y+LYAVSNH GT GHYTAYC++ + +W+
Sbjct: 266 KLTTFVNFPLKDLDLREFASQSCNHAV-YNLYAVSNHSGTTMGGHYTAYCKSPISSEWHS 324
Query: 75 FDDSDVSEISASKVKSPAAYILFY 98
F+DS V+ +S+S V+S AY+LFY
Sbjct: 325 FNDSRVTPMSSSHVRSSDAYLLFY 348
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWYK 74
K T V+FP+ +L++ E+ + + V Y+LYAVSNH GT GHYTAYCR+ +W+
Sbjct: 522 KLTTFVNFPLRDLDLREFASENTNHAV-YNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHT 580
Query: 75 FDDSDVSEISASKVKSPAAYILFY 98
F+DS V+ +S+S+V++ AY+LFY
Sbjct: 581 FNDSSVTPMSSSQVRTSDAYLLFY 604
>sp|F6Z5C0|UBP15_XENTR Ubiquitin carboxyl-terminal hydrolase 15 OS=Xenopus tropicalis
GN=usp15 PE=2 SV=2
Length = 982
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RF+ + R K T VDFP+ +L+MS + +N + Y+L AVSNHYG M GHYTA+
Sbjct: 837 RFSYSRYMRDKLDTLVDFPISDLDMSTFLINPNAGPCCYNLIAVSNHYGGMGGGHYTAFA 896
Query: 67 RN--NYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+N + KWY FDDS VS S ++ S AAY+LFY
Sbjct: 897 KNKDDGKWYYFDDSSVSTASEEQIVSKAAYVLFY 930
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 7 HRF-TSDGWCRKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAY 65
+RF TS G +K VDFP+ L++ ++ + V Y LYA+ NH G++ GHYTA
Sbjct: 464 NRFSTSRGSIKKSSVGVDFPLQRLSLGDFASDKVGSPV-YQLYALCNHSGSVHYGHYTAL 522
Query: 66 CRNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
CR W+ ++DS VS +S ++V S Y+LFY
Sbjct: 523 CRCQTGWHVYNDSRVSPVSENQVASSEGYVLFY 555
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWYK 74
K T V+FP+ +L++ E+ + + V Y+LYAVSNH GT GHYTAYCR+ +W+
Sbjct: 527 KLTTFVNFPLRDLDLREFASENTNHAV-YNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHT 585
Query: 75 FDDSDVSEISASKVKSPAAYILFY 98
F+DS V+ +S+S+V++ AY+LFY
Sbjct: 586 FNDSSVTPMSSSQVRTSDAYLLFY 609
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAYC 66
RFT + + K T V+F + +L++S+Y N + + Y+LYA+SNHYG + GHYTAY
Sbjct: 784 RFTYSRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGGHYTAYA 843
Query: 67 R--NNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
+ + KWY FDDS VS ++ S++K+ AAY+LFY
Sbjct: 844 KLMDETKWYNFDDSRVSAVNESEIKTSAAYVLFY 877
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 7 HRFT-SDGWCRKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAY 65
+RF+ S G +K VDFP+ L++ ++ + V Y LYA+ NH G++ GHYTA
Sbjct: 464 NRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPV-YQLYALCNHSGSVHYGHYTAL 522
Query: 66 CRNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
CR W+ ++DS VS +S ++V S Y+LFY
Sbjct: 523 CRCQTGWHVYNDSRVSPVSENQVASSEGYVLFY 555
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 7 HRFT-SDGWCRKKQTTVDFPVDNLNMSEYTVNSESRDVRYDLYAVSNHYGTMESGHYTAY 65
+RF+ S G +K VDFP+ L++ ++ + V Y LYA+ NH G++ GHYTA
Sbjct: 464 NRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPV-YQLYALCNHSGSVHYGHYTAL 522
Query: 66 CRNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
CR W+ ++DS VS +S ++V S Y+LFY
Sbjct: 523 CRCQTGWHVYNDSRVSPVSENQVASSEGYVLFY 555
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 75.9 bits (185), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 9 FTSDGWCRKKQTTVDFPVDNLNMSEYTVNSESRDV-RYDLYAVSNHYGTMESGHYTAYC- 66
F S W K V+FPV NL++S++ + + + YDLYAV NHYG M GHYTA
Sbjct: 1151 FRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACAR 1210
Query: 67 --------RNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
R++ W FDDS V+ + S+V + AY+LFY
Sbjct: 1211 LPSDRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFY 1250
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 75.9 bits (185), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 9 FTSDGWCRKKQTTVDFPVDNLNMSEYTVNSESRDV-RYDLYAVSNHYGTMESGHYTAYC- 66
F S W K V+FPV NL++S++ + + + YDLYAV NHYG M GHYTA
Sbjct: 1154 FRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACAR 1213
Query: 67 --------RNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
R++ W FDDS V+ + S+V + AY+LFY
Sbjct: 1214 LPNDRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFY 1253
>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19
PE=1 SV=2
Length = 1318
Score = 75.9 bits (185), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 9 FTSDGWCRKKQTTVDFPVDNLNMSEYTVNSESRDV-RYDLYAVSNHYGTMESGHYTAYC- 66
F S W K V+FPV NL++S++ + + + YDLYAV NHYG M GHYTA
Sbjct: 1112 FRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACAR 1171
Query: 67 --------RNNYKWYKFDDSDVSEISASKVKSPAAYILFY 98
R++ W FDDS V+ + S+V + AY+LFY
Sbjct: 1172 LPNDRSSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFY 1211
>sp|A5PN09|UBP20_DANRE Ubiquitin carboxyl-terminal hydrolase 20 OS=Danio rerio GN=usp20
PE=2 SV=1
Length = 911
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVN-SESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWY 73
K + V FP++ L++ + S S+ YDL +V H+GT SGHY AYC+N N +WY
Sbjct: 598 KINSHVSFPLEGLDLKPFLAKESPSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWY 657
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+ + V++ AY+LFY
Sbjct: 658 EFDDQYVTEVHETVVQNAEAYVLFY 682
>sp|P39538|UBP12_YEAST Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP12 PE=1 SV=1
Length = 1254
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 8 RFTSD-GWCRKKQTTVDFPVDNLNMSEYTV-NSESRDVRYDLYAVSNHYGTMESGHYTAY 65
RF S + K TV+FP+ +L++S Y V + R + YDLYAV NHYG + GHYTAY
Sbjct: 1013 RFESQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAY 1072
Query: 66 CRN--NYKWYKFDDSDVSEISASKVKSPAAYILFYM 99
+N + KWY FDDS V+E + + +AY+LFY+
Sbjct: 1073 VKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYI 1108
>sp|B1WBD7|UBP20_XENLA Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus laevis GN=usp20
PE=2 SV=1
Length = 840
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 22 VDFPVDNLNMSEYTVNS-ESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWYKFDDS 78
V FP++ LN+ + SR YDL AV H+G+ SGHY +YC+N N +WY+FDD
Sbjct: 529 VSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSASSGHYISYCQNVINGQWYEFDDQ 588
Query: 79 DVSEISASKVKSPAAYILFY 98
V+E+ + V++ AY+LFY
Sbjct: 589 YVTEVHETVVQNAEAYVLFY 608
>sp|A0JM59|UBP20_XENTR Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis
GN=usp20 PE=2 SV=1
Length = 884
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 22 VDFPVDNLNMSEYTVNS-ESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWYKFDDS 78
V FP++ LN+ + SR YDL AV H+G+ SGHY +YC+N N +WY+FDD
Sbjct: 573 VSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSASSGHYISYCQNVINGQWYEFDDQ 632
Query: 79 DVSEISASKVKSPAAYILFY 98
V+E+ + V++ AY+LFY
Sbjct: 633 YVTEVHETVVQNAEAYVLFY 652
>sp|A7Z056|UBP20_BOVIN Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus GN=USP20
PE=2 SV=1
Length = 912
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNS-ESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWY 73
K + V FP++ L++ + S+ YDL +V H+GT SGHY AYC+N N +WY
Sbjct: 596 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWY 655
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+ + V++ AY+LFY
Sbjct: 656 EFDDQYVTEVHETVVQNAEAYVLFY 680
>sp|Q8C6M1|UBP20_MOUSE Ubiquitin carboxyl-terminal hydrolase 20 OS=Mus musculus GN=Usp20
PE=1 SV=1
Length = 916
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNS-ESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWY 73
K + V FP++ L++ + S+ YDL +V H+GT SGHY AYC+N N +WY
Sbjct: 600 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTAGSGHYIAYCQNVINGQWY 659
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+ + V++ AY+LFY
Sbjct: 660 EFDDQYVTEVHETVVQNVEAYVLFY 684
>sp|Q5R5Z6|UBP20_PONAB Ubiquitin carboxyl-terminal hydrolase 20 OS=Pongo abelii GN=USP20
PE=2 SV=1
Length = 913
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNS-ESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWY 73
K + V FP++ L++ + S+ YDL +V H+GT SGHY AYC+N N +WY
Sbjct: 597 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWY 656
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+ + V++ Y+LFY
Sbjct: 657 EFDDQYVTEVHETVVQNAEGYVLFY 681
>sp|Q9Y2K6|UBP20_HUMAN Ubiquitin carboxyl-terminal hydrolase 20 OS=Homo sapiens GN=USP20
PE=1 SV=2
Length = 914
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 17 KKQTTVDFPVDNLNMSEYTVNS-ESRDVRYDLYAVSNHYGTMESGHYTAYCRN--NYKWY 73
K + V FP++ L++ + S+ YDL +V H+GT SGHY AYC+N N +WY
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWY 657
Query: 74 KFDDSDVSEISASKVKSPAAYILFY 98
+FDD V+E+ + V++ Y+LFY
Sbjct: 658 EFDDQYVTEVHETVVQNAEGYVLFY 682
>sp|Q01988|UBP11_CANFA Ubiquitin carboxyl-terminal hydrolase 11 (Fragment) OS=Canis
familiaris GN=USP11 PE=2 SV=1
Length = 445
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 8 RFTSDGWCRKK-QTTVDFPVDNLNMSEYTVNSESRDV----RYDLYAVSNHYGTMESGHY 62
RF+ + R+K T V+FP+ +L+ SE+ + ++ +YDL AVSNHYG + GHY
Sbjct: 312 RFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESAPELYKYDLIAVSNHYGGLRDGHY 371
Query: 63 TAYCRNNYKWYK--FDDSDVSEISASKVKSPAAYILFYM 99
T + N FDD+ VS ++ ++++S AAY+LFY
Sbjct: 372 TTFACNKDSGQSDYFDDNSVSPVTENQIESKAAYVLFYQ 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,313,155
Number of Sequences: 539616
Number of extensions: 1394490
Number of successful extensions: 3110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 2791
Number of HSP's gapped (non-prelim): 289
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)