Query psy10722
Match_columns 106
No_of_seqs 110 out of 164
Neff 4.3
Searched_HMMs 46136
Date Fri Aug 16 16:54:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10722.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10722hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2931|consensus 100.0 1.4E-40 3E-45 270.0 7.8 97 3-106 1-99 (326)
2 PF03096 Ndr: Ndr family; Int 100.0 4.7E-38 1E-42 251.9 6.5 74 33-106 1-76 (283)
3 TIGR02427 protocat_pcaD 3-oxoa 97.1 0.0012 2.5E-08 46.0 5.0 51 43-99 2-53 (251)
4 PRK05855 short chain dehydroge 96.6 0.0064 1.4E-07 49.5 6.4 61 33-99 5-65 (582)
5 TIGR02240 PHA_depoly_arom poly 96.6 0.0072 1.6E-07 45.4 6.2 58 36-99 7-65 (276)
6 PRK00870 haloalkane dehalogena 96.5 0.019 4.1E-07 43.8 7.7 52 42-99 35-87 (302)
7 PLN02824 hydrolase, alpha/beta 96.1 0.021 4.5E-07 43.2 6.1 62 32-100 9-70 (294)
8 TIGR03056 bchO_mg_che_rel puta 96.1 0.03 6.4E-07 40.7 6.7 59 34-98 9-67 (278)
9 PRK10673 acyl-CoA esterase; Pr 96.0 0.017 3.7E-07 41.9 5.1 51 43-99 3-56 (255)
10 TIGR03611 RutD pyrimidine util 95.8 0.034 7.5E-07 39.2 5.8 51 43-99 1-53 (257)
11 PRK03204 haloalkane dehalogena 95.6 0.048 1E-06 41.9 6.4 60 31-98 14-73 (286)
12 PLN02679 hydrolase, alpha/beta 95.5 0.044 9.6E-07 43.8 6.1 52 42-99 73-128 (360)
13 PRK03592 haloalkane dehalogena 95.4 0.087 1.9E-06 39.8 7.3 61 32-100 8-68 (295)
14 PRK14875 acetoin dehydrogenase 95.0 0.051 1.1E-06 41.9 5.1 58 36-99 114-171 (371)
15 TIGR01250 pro_imino_pep_2 prol 94.8 0.12 2.6E-06 36.9 6.2 58 35-99 6-67 (288)
16 PRK10349 carboxylesterase BioH 94.6 0.041 8.8E-07 40.5 3.5 49 43-98 4-52 (256)
17 TIGR03343 biphenyl_bphD 2-hydr 94.6 0.23 4.9E-06 36.7 7.3 54 42-100 21-75 (282)
18 PRK06489 hypothetical protein; 94.5 0.092 2E-06 41.7 5.4 58 41-99 50-119 (360)
19 TIGR01738 bioH putative pimelo 94.4 0.054 1.2E-06 37.6 3.4 42 52-99 3-44 (245)
20 PLN02385 hydrolase; alpha/beta 94.2 0.2 4.3E-06 39.4 6.6 63 31-98 61-128 (349)
21 PRK05077 frsA fermentation/res 94.0 0.25 5.5E-06 41.0 7.2 68 27-99 164-236 (414)
22 PLN02578 hydrolase 93.4 0.4 8.7E-06 38.0 7.2 53 40-100 75-127 (354)
23 PLN03084 alpha/beta hydrolase 93.4 0.18 3.9E-06 41.7 5.3 51 42-98 116-166 (383)
24 PLN02298 hydrolase, alpha/beta 92.8 0.65 1.4E-05 35.9 7.4 67 28-99 29-101 (330)
25 PF04083 Abhydro_lipase: Parti 92.7 0.37 7.9E-06 30.9 4.9 40 27-66 8-56 (63)
26 PLN02894 hydrolase, alpha/beta 91.2 0.46 1E-05 39.0 5.2 50 44-99 96-145 (402)
27 PLN03087 BODYGUARD 1 domain co 91.0 0.88 1.9E-05 39.2 6.8 61 37-99 182-246 (481)
28 PRK07581 hypothetical protein; 89.5 1.1 2.5E-05 34.7 5.8 56 42-100 27-86 (339)
29 TIGR03695 menH_SHCHC 2-succiny 89.5 0.63 1.4E-05 31.9 3.9 41 53-99 1-41 (251)
30 PRK10749 lysophospholipase L2; 88.7 2.6 5.6E-05 33.0 7.3 63 32-100 31-96 (330)
31 PLN02211 methyl indole-3-aceta 88.3 0.88 1.9E-05 35.0 4.4 43 51-99 16-59 (273)
32 PRK11126 2-succinyl-6-hydroxy- 88.1 0.61 1.3E-05 33.6 3.2 41 52-99 1-41 (242)
33 PLN02872 triacylglycerol lipas 87.9 1.6 3.4E-05 36.4 5.9 69 26-97 39-119 (395)
34 PF12697 Abhydrolase_6: Alpha/ 87.5 1.2 2.6E-05 30.0 4.3 39 56-100 1-39 (228)
35 PRK08775 homoserine O-acetyltr 87.0 1.3 2.9E-05 34.7 4.8 55 41-98 46-112 (343)
36 PF13899 Thioredoxin_7: Thiore 86.5 1 2.2E-05 28.7 3.2 41 51-93 16-60 (82)
37 PRK00175 metX homoserine O-ace 86.5 1.5 3.2E-05 35.4 4.9 54 42-96 34-102 (379)
38 PRK10162 acetyl esterase; Prov 86.5 3.6 7.7E-05 32.5 6.9 61 30-95 56-122 (318)
39 PHA02857 monoglyceride lipase; 84.6 1.2 2.7E-05 33.0 3.3 44 49-98 21-65 (276)
40 TIGR01392 homoserO_Ac_trn homo 84.2 2.4 5.3E-05 33.4 5.0 53 42-96 17-83 (351)
41 PLN02980 2-oxoglutarate decarb 83.1 4.3 9.4E-05 39.7 7.1 47 46-98 1363-1410(1655)
42 TIGR03101 hydr2_PEP hydrolase, 82.8 5.2 0.00011 31.7 6.4 63 35-99 4-70 (266)
43 PLN02511 hydrolase 82.4 9.5 0.00021 31.1 7.9 68 29-99 69-143 (388)
44 PF05448 AXE1: Acetyl xylan es 80.7 3.1 6.7E-05 33.8 4.5 47 50-102 80-126 (320)
45 PLN02965 Probable pheophorbida 79.7 3.2 7E-05 30.7 4.0 39 55-99 5-44 (255)
46 TIGR01249 pro_imino_pep_1 prol 79.4 8.9 0.00019 29.5 6.5 57 35-99 8-67 (306)
47 KOG1454|consensus 78.6 8.5 0.00018 31.2 6.4 62 30-97 24-98 (326)
48 KOG4409|consensus 77.8 5.2 0.00011 34.1 5.1 64 29-98 63-129 (365)
49 TIGR02821 fghA_ester_D S-formy 76.0 14 0.0003 28.3 6.7 50 41-94 25-81 (275)
50 PRK10566 esterase; Provisional 73.7 5.6 0.00012 29.0 3.9 43 50-98 24-67 (249)
51 KOG2624|consensus 69.1 7.9 0.00017 33.0 4.2 50 24-76 41-93 (403)
52 PF12146 Hydrolase_4: Putative 68.7 12 0.00027 24.2 4.2 52 43-100 4-58 (79)
53 cd02958 UAS UAS family; UAS is 67.5 7.1 0.00015 26.1 3.0 45 51-95 16-62 (114)
54 TIGR01840 esterase_phb esteras 65.2 9.3 0.0002 27.9 3.5 44 50-97 10-55 (212)
55 TIGR03100 hydr1_PEP hydrolase, 64.9 58 0.0012 24.9 7.9 49 50-100 23-72 (274)
56 PLN02652 hydrolase; alpha/beta 64.3 24 0.00053 29.2 6.1 52 41-98 121-176 (395)
57 TIGR00976 /NonD putative hydro 62.5 28 0.0006 29.7 6.3 60 37-98 2-66 (550)
58 cd02955 SSP411 TRX domain, SSP 59.1 12 0.00027 26.4 3.1 44 50-95 13-60 (124)
59 COG0400 Predicted esterase [Ge 56.1 21 0.00045 27.5 4.1 50 49-104 14-63 (207)
60 COG0596 MhpC Predicted hydrola 54.8 48 0.001 21.9 5.2 41 53-99 21-64 (282)
61 PF00975 Thioesterase: Thioest 52.6 20 0.00044 25.7 3.4 40 54-99 1-41 (229)
62 KOG4178|consensus 51.3 61 0.0013 27.2 6.3 59 32-96 22-82 (322)
63 TIGR03502 lipase_Pla1_cef extr 50.8 20 0.00043 33.2 3.7 42 52-99 448-490 (792)
64 cd02960 AGR Anterior Gradient 48.8 32 0.00069 25.0 3.9 45 50-96 21-69 (130)
65 PF12695 Abhydrolase_5: Alpha/ 48.3 33 0.00071 22.3 3.6 38 55-98 1-39 (145)
66 PF02230 Abhydrolase_2: Phosph 47.2 17 0.00038 26.6 2.4 43 49-95 10-52 (216)
67 PLN00021 chlorophyllase 45.8 51 0.0011 26.5 5.0 42 49-96 48-90 (313)
68 PRK10985 putative hydrolase; P 44.5 1.5E+02 0.0033 23.1 7.7 62 32-97 32-99 (324)
69 TIGR01694 MTAP 5'-deoxy-5'-met 42.2 27 0.00058 26.9 2.8 37 30-66 18-57 (241)
70 PRK11071 esterase YqiA; Provis 37.9 31 0.00067 25.3 2.5 43 54-97 2-44 (190)
71 cd00707 Pancreat_lipase_like P 34.4 37 0.00081 26.5 2.5 43 50-96 33-77 (275)
72 COG3458 Acetyl esterase (deace 33.9 79 0.0017 26.7 4.4 52 43-100 73-124 (321)
73 cd02959 ERp19 Endoplasmic reti 33.9 45 0.00097 22.8 2.6 45 50-94 17-62 (117)
74 PF03959 FSH1: Serine hydrolas 33.6 41 0.00089 25.0 2.5 42 52-96 3-46 (212)
75 KOG2564|consensus 33.5 1.6E+02 0.0034 25.1 6.2 61 32-99 49-116 (343)
76 COG3167 PilO Tfp pilus assembl 33.4 36 0.00078 27.1 2.3 27 42-68 138-175 (211)
77 TIGR01607 PST-A Plasmodium sub 32.1 1.4E+02 0.003 23.7 5.5 56 43-98 10-87 (332)
78 PRK10252 entF enterobactin syn 31.3 56 0.0012 30.0 3.4 42 52-99 1067-1108(1296)
79 PLN02634 probable pectinestera 31.2 76 0.0017 26.9 4.0 32 34-65 97-128 (359)
80 KOG1455|consensus 30.8 1.7E+02 0.0036 24.7 5.8 62 31-97 27-94 (313)
81 PRK11460 putative hydrolase; P 29.9 73 0.0016 23.9 3.4 41 50-96 13-56 (232)
82 PLN03090 auxin-responsive fami 28.1 74 0.0016 22.6 2.9 36 37-85 39-74 (104)
83 KOG0322|consensus 27.9 58 0.0013 27.4 2.7 28 41-68 273-300 (323)
84 cd02783 MopB_CT_2 The MopB_CT_ 27.4 1.6E+02 0.0035 21.1 4.7 37 30-66 48-86 (156)
85 COG0429 Predicted hydrolase of 26.4 3.2E+02 0.0068 23.4 6.8 72 29-104 47-123 (345)
86 PF02519 Auxin_inducible: Auxi 26.4 74 0.0016 22.0 2.7 21 36-57 34-54 (100)
87 PF10531 SLBB: SLBB domain; I 26.2 92 0.002 18.8 2.8 23 44-67 1-23 (59)
88 PLN02176 putative pectinestera 26.1 92 0.002 26.1 3.6 31 33-63 79-109 (340)
89 smart00594 UAS UAS domain. 26.0 1E+02 0.0023 20.9 3.4 44 51-96 26-73 (122)
90 PLN02442 S-formylglutathione h 24.5 3.3E+02 0.0072 21.0 6.6 63 30-96 17-88 (283)
91 PF03373 Octapeptide: Octapept 23.1 41 0.00088 14.0 0.5 7 94-100 1-7 (8)
92 PF04199 Cyclase: Putative cyc 23.1 30 0.00066 24.7 0.2 10 87-96 51-60 (171)
93 PF08909 DUF1854: Domain of un 23.0 82 0.0018 23.2 2.5 19 31-49 73-91 (133)
94 cd02953 DsbDgamma DsbD gamma f 22.8 97 0.0021 19.8 2.6 42 51-94 10-55 (104)
95 TIGR03230 lipo_lipase lipoprot 22.7 1.3E+02 0.0029 25.9 4.1 45 50-98 38-86 (442)
96 TIGR03035 trp_arylform arylfor 22.3 30 0.00064 26.2 0.0 11 87-97 47-57 (206)
97 COG0050 TufB GTPases - transla 21.8 39 0.00086 29.0 0.7 16 83-98 72-87 (394)
98 PF14954 LIX1: Limb expression 21.8 1.1E+02 0.0025 24.9 3.2 48 34-83 37-84 (252)
99 PF01678 DAP_epimerase: Diamin 21.8 2.2E+02 0.0048 19.1 4.3 23 31-53 88-110 (121)
100 cd02951 SoxW SoxW family; SoxW 21.4 1.4E+02 0.003 19.8 3.2 43 51-95 12-59 (125)
101 COG0692 Ung Uracil DNA glycosy 21.1 70 0.0015 25.7 1.9 28 38-72 51-79 (223)
102 PF02575 YbaB_DNA_bd: YbaB/Ebf 21.1 1.3E+02 0.0028 19.5 2.9 21 32-52 21-41 (93)
103 KOG0325|consensus 20.7 37 0.0008 27.3 0.3 19 57-76 155-173 (226)
104 COG0412 Dienelactone hydrolase 20.7 2E+02 0.0043 22.1 4.3 57 32-95 3-64 (236)
105 PRK10115 protease 2; Provision 20.5 5.6E+02 0.012 23.0 7.6 65 30-98 415-487 (686)
106 PF13098 Thioredoxin_2: Thiore 20.4 35 0.00076 22.0 0.1 44 51-96 4-51 (112)
No 1
>KOG2931|consensus
Probab=100.00 E-value=1.4e-40 Score=270.02 Aligned_cols=97 Identities=47% Similarity=0.739 Sum_probs=91.5
Q ss_pred CCCCCccccceeeeccccccccccCCCCceeEEEecCCceEEEEEeCCCC--CCeEEEeccCCCcchhcccccccchhHH
Q psy10722 3 AESMDDVDLRQVQLSIPLTRSLARTDPTVEEVYVETDRGSILVAVAGNRG--KPAILTYHDLGLNYISNFQAFFNFSDMR 80 (106)
Q Consensus 3 ~~~m~dv~l~~~~~~~~~~r~~~~~~~~~qe~~V~T~~G~v~V~v~G~~~--kPailTyHDvGlNh~scF~~ff~~~~m~ 80 (106)
|++++|++++++||++.+.. ..+||+|+|.+|.|||+|||+++ |||||||||+||||+||||+|||+|+|+
T Consensus 1 M~~~~~~~~~d~~pl~~~~~-------~~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ 73 (326)
T KOG2931|consen 1 MAELQDVVSTDIKPLLEGGA-------TCQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMA 73 (326)
T ss_pred CCcccccccccchhhhcCCC-------cceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHH
Confidence 57899999999999997762 26999999999999999999877 9999999999999999999999999999
Q ss_pred HhhcCceEEEEcCCCCCCCCCCCCCC
Q psy10722 81 SLLENFSVYHVNAPGQEEGAQPLADE 106 (106)
Q Consensus 81 ei~~~f~i~HVdaPGqe~gA~~lp~~ 106 (106)
||++|||||||||||||+|||.||.|
T Consensus 74 ei~~~fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 74 EILEHFCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred HHHhheEEEecCCCccccCCccCCCC
Confidence 99999999999999999999999975
No 2
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=100.00 E-value=4.7e-38 Score=251.86 Aligned_cols=74 Identities=59% Similarity=0.961 Sum_probs=59.0
Q ss_pred eEEEecCCceEEEEEeCCCC--CCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCCCCCCCC
Q psy10722 33 EVYVETDRGSILVAVAGNRG--KPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGAQPLADE 106 (106)
Q Consensus 33 e~~V~T~~G~v~V~v~G~~~--kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA~~lp~~ 106 (106)
||+|+|++|.|+|+|||+++ |||||||||+||||+|||++|||+|+|++|++|||||||||||||+||+++|++
T Consensus 1 eh~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~ 76 (283)
T PF03096_consen 1 EHDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEG 76 (283)
T ss_dssp -EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT
T ss_pred CceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccccc
Confidence 79999999999999999876 999999999999999999999999999999999999999999999999999975
No 3
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.09 E-value=0.0012 Score=45.97 Aligned_cols=51 Identities=18% Similarity=0.395 Sum_probs=40.0
Q ss_pred EEEEEeCCC-CCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 43 ILVAVAGNR-GKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 43 v~V~v~G~~-~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
+++..+|++ ++|+||.+|..|.++ .+|..+ .+.+.++|.++-+|.||+...
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~-~~~~~~-----~~~l~~~~~v~~~d~~G~G~s 53 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDL-RMWDPV-----LPALTPDFRVLRYDKRGHGLS 53 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccch-hhHHHH-----HHHhhcccEEEEecCCCCCCC
Confidence 567778965 899999999999987 444332 556778999999999999653
No 4
>PRK05855 short chain dehydrogenase; Validated
Probab=96.62 E-value=0.0064 Score=49.50 Aligned_cols=61 Identities=18% Similarity=0.251 Sum_probs=48.0
Q ss_pred eEEEecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 33 EVYVETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 33 e~~V~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
++.+....+.+++.++|+.++|+||..|..|.+. .+|..+ ...+.++|.+|.+|.||+..-
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~-~~w~~~-----~~~L~~~~~Vi~~D~~G~G~S 65 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNH-EVWDGV-----APLLADRFRVVAYDVRGAGRS 65 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchH-HHHHHH-----HHHhhcceEEEEecCCCCCCC
Confidence 4445555568999999988899999999999987 455443 455678999999999999653
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=96.61 E-value=0.0072 Score=45.39 Aligned_cols=58 Identities=24% Similarity=0.392 Sum_probs=43.0
Q ss_pred EecCCceEEEEEe-CCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 36 VETDRGSILVAVA-GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 36 V~T~~G~v~V~v~-G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
+++.-.+++..+. |..++|+||.+|.+|.+. ..|. +-++.+.+++.+|-+|.||+..-
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~-~~w~-----~~~~~L~~~~~vi~~Dl~G~G~S 65 (276)
T TIGR02240 7 IDLDGQSIRTAVRPGKEGLTPLLIFNGIGANL-ELVF-----PFIEALDPDLEVIAFDVPGVGGS 65 (276)
T ss_pred eccCCcEEEEEEecCCCCCCcEEEEeCCCcch-HHHH-----HHHHHhccCceEEEECCCCCCCC
Confidence 3444456777665 456678999999999998 3453 33567778999999999999753
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=96.46 E-value=0.019 Score=43.78 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=40.8
Q ss_pred eEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhc-CceEEEEcCCCCCCC
Q psy10722 42 SILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLE-NFSVYHVNAPGQEEG 99 (106)
Q Consensus 42 ~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~-~f~i~HVdaPGqe~g 99 (106)
.+++...|++++|+||.+|..|.+. .+|..+ +..|.+ +|.++-+|-||+..-
T Consensus 35 ~i~y~~~G~~~~~~lvliHG~~~~~-~~w~~~-----~~~L~~~gy~vi~~Dl~G~G~S 87 (302)
T PRK00870 35 RMHYVDEGPADGPPVLLLHGEPSWS-YLYRKM-----IPILAAAGHRVIAPDLIGFGRS 87 (302)
T ss_pred EEEEEecCCCCCCEEEEECCCCCch-hhHHHH-----HHHHHhCCCEEEEECCCCCCCC
Confidence 4778888987889999999999876 555433 556654 699999999999754
No 7
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=96.08 E-value=0.021 Score=43.18 Aligned_cols=62 Identities=23% Similarity=0.236 Sum_probs=44.6
Q ss_pred eeEEEecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCC
Q psy10722 32 EEVYVETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 32 qe~~V~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA 100 (106)
+...++...-.+++...|+.+ |+||-.|..|.+.. +|..+ +..+.++|.+|-+|.||+..-.
T Consensus 9 ~~~~~~~~~~~i~y~~~G~~~-~~vlllHG~~~~~~-~w~~~-----~~~L~~~~~vi~~DlpG~G~S~ 70 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGTSG-PALVLVHGFGGNAD-HWRKN-----TPVLAKSHRVYAIDLLGYGYSD 70 (294)
T ss_pred CCceEEEcCeEEEEEEcCCCC-CeEEEECCCCCChh-HHHHH-----HHHHHhCCeEEEEcCCCCCCCC
Confidence 344444444466777777543 88999999999984 55433 5678889999999999997543
No 8
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=96.07 E-value=0.03 Score=40.68 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=45.7
Q ss_pred EEEecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCC
Q psy10722 34 VYVETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEE 98 (106)
Q Consensus 34 ~~V~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~ 98 (106)
..+.+.-..+++...|..+.|+||.+|..|.+. .+|..+ ++.|.++|.++=+|.||+..
T Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~-~~~~~~-----~~~l~~~~~vi~~D~~G~G~ 67 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPTAGPLLLLLHGTGAST-HSWRDL-----MPPLARSFRVVAPDLPGHGF 67 (278)
T ss_pred ceeeECCEEEEEEecCCCCCCeEEEEcCCCCCH-HHHHHH-----HHHHhhCcEEEeecCCCCCC
Confidence 344555557778888887889999999999887 555433 56777789999999999964
No 9
>PRK10673 acyl-CoA esterase; Provisional
Probab=95.99 E-value=0.017 Score=41.92 Aligned_cols=51 Identities=14% Similarity=0.210 Sum_probs=38.8
Q ss_pred EEEEEe---CCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 43 ILVAVA---GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 43 v~V~v~---G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
++++.+ ++.++|+||-.|..+.|+. +|..+ ...+.++|+++-+|.||+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~-----~~~l~~~~~vi~~D~~G~G~s 56 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLD-NLGVL-----ARDLVNDHDIIQVDMRNHGLS 56 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchh-HHHHH-----HHHHhhCCeEEEECCCCCCCC
Confidence 345554 3578999999999999984 44333 566788999999999998643
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=95.75 E-value=0.034 Score=39.23 Aligned_cols=51 Identities=18% Similarity=0.290 Sum_probs=38.8
Q ss_pred EEEEEeCC--CCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 43 ILVAVAGN--RGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 43 v~V~v~G~--~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
|+..+.|. .++|+||-.|..|.+. .+|. +.++.+.+++.++-+|.||+..-
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~-~~~~-----~~~~~l~~~~~vi~~D~~G~G~S 53 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSG-SYWA-----PQLDVLTQRFHVVTYDHRGTGRS 53 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcch-hHHH-----HHHHHHHhccEEEEEcCCCCCCC
Confidence 35566775 6789999999999987 4443 23566778999999999998643
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=95.59 E-value=0.048 Score=41.85 Aligned_cols=60 Identities=20% Similarity=0.215 Sum_probs=46.0
Q ss_pred ceeEEEecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCC
Q psy10722 31 VEEVYVETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEE 98 (106)
Q Consensus 31 ~qe~~V~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~ 98 (106)
..+..|++..+.+++...|. +|+||-.|..+.+. .+|.. -+..+.++|.++-+|-||+..
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~--~~~iv~lHG~~~~~-~~~~~-----~~~~l~~~~~vi~~D~~G~G~ 73 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGT--GPPILLCHGNPTWS-FLYRD-----IIVALRDRFRCVAPDYLGFGL 73 (286)
T ss_pred ccceEEEcCCcEEEEEECCC--CCEEEEECCCCccH-HHHHH-----HHHHHhCCcEEEEECCCCCCC
Confidence 45667888878899888884 58899999998654 34433 345677889999999999964
No 12
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=95.46 E-value=0.044 Score=43.76 Aligned_cols=52 Identities=25% Similarity=0.448 Sum_probs=41.8
Q ss_pred eEEEEEeCCC----CCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 42 SILVAVAGNR----GKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 42 ~v~V~v~G~~----~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
++++...|+. +.|+||..|..|.++ ..|..+ +..+.++|.+|.+|-||+..-
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~-~~w~~~-----~~~L~~~~~via~Dl~G~G~S 128 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASI-PHWRRN-----IGVLAKNYTVYAIDLLGFGAS 128 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCH-HHHHHH-----HHHHhcCCEEEEECCCCCCCC
Confidence 7888888976 678999999999987 344333 456778999999999999753
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=95.43 E-value=0.087 Score=39.79 Aligned_cols=61 Identities=13% Similarity=-0.005 Sum_probs=44.9
Q ss_pred eeEEEecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCC
Q psy10722 32 EEVYVETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 32 qe~~V~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA 100 (106)
+.+.+++.-..+++...|+ +|+||-+|..+.+. .+|.. -++.+.+++.+|-+|-||+..-.
T Consensus 8 ~~~~~~~~g~~i~y~~~G~--g~~vvllHG~~~~~-~~w~~-----~~~~L~~~~~via~D~~G~G~S~ 68 (295)
T PRK03592 8 EMRRVEVLGSRMAYIETGE--GDPIVFLHGNPTSS-YLWRN-----IIPHLAGLGRCLAPDLIGMGASD 68 (295)
T ss_pred cceEEEECCEEEEEEEeCC--CCEEEEECCCCCCH-HHHHH-----HHHHHhhCCEEEEEcCCCCCCCC
Confidence 3344544445688888884 57999999999877 45543 36678888999999999997543
No 14
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=95.03 E-value=0.051 Score=41.92 Aligned_cols=58 Identities=14% Similarity=0.213 Sum_probs=43.8
Q ss_pred EecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 36 VETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 36 V~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
+......++....|..++|++|.+|..|.+. .+|..+ +..|.+.+.++-+|.||+...
T Consensus 114 ~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~-----~~~l~~~~~v~~~d~~g~G~s 171 (371)
T PRK14875 114 ARIGGRTVRYLRLGEGDGTPVVLIHGFGGDL-NNWLFN-----HAALAAGRPVIALDLPGHGAS 171 (371)
T ss_pred ceEcCcEEEEecccCCCCCeEEEECCCCCcc-chHHHH-----HHHHhcCCEEEEEcCCCCCCC
Confidence 4444456777777877789999999998887 444333 556777899999999999764
No 15
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=94.84 E-value=0.12 Score=36.86 Aligned_cols=58 Identities=22% Similarity=0.306 Sum_probs=39.4
Q ss_pred EEecCCceEEEEEeCC-CCCCeEEEeccC-CCcchhcccccccchhHHHhhc--CceEEEEcCCCCCCC
Q psy10722 35 YVETDRGSILVAVAGN-RGKPAILTYHDL-GLNYISNFQAFFNFSDMRSLLE--NFSVYHVNAPGQEEG 99 (106)
Q Consensus 35 ~V~T~~G~v~V~v~G~-~~kPailTyHDv-GlNh~scF~~ff~~~~m~ei~~--~f~i~HVdaPGqe~g 99 (106)
.|.+..|.+.+...|. .++|+||.+|.. |.++ ..+. .+.++++ +|.++.+|.||+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~-~~~~------~~~~~l~~~g~~vi~~d~~G~G~s 67 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSH-EYLE------NLRELLKEEGREVIMYDQLGCGYS 67 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccH-HHHH------HHHHHHHhcCCEEEEEcCCCCCCC
Confidence 3445567788888884 457899999996 4443 3322 2445544 599999999998654
No 16
>PRK10349 carboxylesterase BioH; Provisional
Probab=94.64 E-value=0.041 Score=40.53 Aligned_cols=49 Identities=24% Similarity=0.357 Sum_probs=36.2
Q ss_pred EEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCC
Q psy10722 43 ILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEE 98 (106)
Q Consensus 43 v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~ 98 (106)
++...+|+ +.|+||-.|+.|.+.. .|. +-+..+.++|.++.+|.||+..
T Consensus 4 ~~y~~~G~-g~~~ivllHG~~~~~~-~w~-----~~~~~L~~~~~vi~~Dl~G~G~ 52 (256)
T PRK10349 4 IWWQTKGQ-GNVHLVLLHGWGLNAE-VWR-----CIDEELSSHFTLHLVDLPGFGR 52 (256)
T ss_pred cchhhcCC-CCCeEEEECCCCCChh-HHH-----HHHHHHhcCCEEEEecCCCCCC
Confidence 34445564 3357999999999883 342 3467788899999999999963
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=94.59 E-value=0.23 Score=36.66 Aligned_cols=54 Identities=17% Similarity=0.351 Sum_probs=37.6
Q ss_pred eEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCCC
Q psy10722 42 SILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 42 ~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~gA 100 (106)
.++..+.| +.|+||-.|.+|.+. .++..++. .+..+ .++|.++-+|.||+..-.
T Consensus 21 ~~~y~~~g--~~~~ivllHG~~~~~-~~~~~~~~--~~~~l~~~~~~vi~~D~~G~G~S~ 75 (282)
T TIGR03343 21 RIHYNEAG--NGEAVIMLHGGGPGA-GGWSNYYR--NIGPFVDAGYRVILKDSPGFNKSD 75 (282)
T ss_pred eEEEEecC--CCCeEEEECCCCCch-hhHHHHHH--HHHHHHhCCCEEEEECCCCCCCCC
Confidence 35555555 457899999999876 44544432 24555 457999999999996543
No 18
>PRK06489 hypothetical protein; Provisional
Probab=94.52 E-value=0.092 Score=41.68 Aligned_cols=58 Identities=16% Similarity=0.099 Sum_probs=39.3
Q ss_pred ceEEEEEeCCCC-------CCeEEEeccCCCcchhccc--ccc---cchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 41 GSILVAVAGNRG-------KPAILTYHDLGLNYISNFQ--AFF---NFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 41 G~v~V~v~G~~~-------kPailTyHDvGlNh~scF~--~ff---~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
..++....|+++ .|+||..|..|.++.+ |. .+. ..+-..-+.++|.+|.+|.|||..-
T Consensus 50 ~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~-~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S 119 (360)
T PRK06489 50 LRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS-FLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKS 119 (360)
T ss_pred ceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh-hccchhHHHhcCCCCcccccCCEEEEeCCCCCCCC
Confidence 367788888765 7999999999998743 21 110 0111112267899999999999643
No 19
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=94.39 E-value=0.054 Score=37.57 Aligned_cols=42 Identities=24% Similarity=0.473 Sum_probs=32.9
Q ss_pred CCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 52 GKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 52 ~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
++|+||.+|..|.++ ..|..+ +..+.++|.++.+|.||+...
T Consensus 3 g~~~iv~~HG~~~~~-~~~~~~-----~~~l~~~~~vi~~d~~G~G~s 44 (245)
T TIGR01738 3 GNVHLVLIHGWGMNA-EVFRCL-----DEELSAHFTLHLVDLPGHGRS 44 (245)
T ss_pred CCceEEEEcCCCCch-hhHHHH-----HHhhccCeEEEEecCCcCccC
Confidence 358999999999987 344333 567778899999999998753
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=94.19 E-value=0.2 Score=39.45 Aligned_cols=63 Identities=25% Similarity=0.329 Sum_probs=44.6
Q ss_pred ceeEEEecCCc-eEEEEEeCC---CCCCeEEEeccCCCcchhcccccccchhHHHhh-cCceEEEEcCCCCCC
Q psy10722 31 VEEVYVETDRG-SILVAVAGN---RGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL-ENFSVYHVNAPGQEE 98 (106)
Q Consensus 31 ~qe~~V~T~~G-~v~V~v~G~---~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~-~~f~i~HVdaPGqe~ 98 (106)
.++..+.++.| .+.+...+. +.||+||-.|..|.+....|. +-++.+. .+|.+|-+|-|||..
T Consensus 61 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~-----~~~~~l~~~g~~v~~~D~~G~G~ 128 (349)
T PLN02385 61 TEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFE-----GIARKIASSGYGVFAMDYPGFGL 128 (349)
T ss_pred eeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHH-----HHHHHHHhCCCEEEEecCCCCCC
Confidence 35555666766 577777763 457899999999987632222 2356675 479999999999964
No 21
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=94.03 E-value=0.25 Score=40.95 Aligned_cols=68 Identities=13% Similarity=0.132 Sum_probs=48.1
Q ss_pred CCCCceeEEEecCCc-eEEEEEe---CCCCCCeEEEeccCCCcchhcccccccchhHHHhhc-CceEEEEcCCCCCCC
Q psy10722 27 TDPTVEEVYVETDRG-SILVAVA---GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLE-NFSVYHVNAPGQEEG 99 (106)
Q Consensus 27 ~~~~~qe~~V~T~~G-~v~V~v~---G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~-~f~i~HVdaPGqe~g 99 (106)
.+..+++..|.+..| .+..+++ ++.++|++|.+|..+-+-..++.. -.+.+.+ .|.++-+|-|||.+.
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~-----~~~~La~~Gy~vl~~D~pG~G~s 236 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRL-----FRDYLAPRGIAMLTIDMPSVGFS 236 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHH-----HHHHHHhCCCEEEEECCCCCCCC
Confidence 345678888888888 7887776 456789999998877543222211 2456645 599999999998754
No 22
>PLN02578 hydrolase
Probab=93.44 E-value=0.4 Score=38.03 Aligned_cols=53 Identities=19% Similarity=0.273 Sum_probs=38.8
Q ss_pred CceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCC
Q psy10722 40 RGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 40 ~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA 100 (106)
..+++...+|+ +|+||..|..|.+. ..| . .-+..+.++|.+|-+|.||+....
T Consensus 75 ~~~i~Y~~~g~--g~~vvliHG~~~~~-~~w--~---~~~~~l~~~~~v~~~D~~G~G~S~ 127 (354)
T PLN02578 75 GHKIHYVVQGE--GLPIVLIHGFGASA-FHW--R---YNIPELAKKYKVYALDLLGFGWSD 127 (354)
T ss_pred CEEEEEEEcCC--CCeEEEECCCCCCH-HHH--H---HHHHHHhcCCEEEEECCCCCCCCC
Confidence 34677777783 47789999999985 222 1 225667789999999999987544
No 23
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=93.36 E-value=0.18 Score=41.68 Aligned_cols=51 Identities=14% Similarity=0.240 Sum_probs=40.5
Q ss_pred eEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCC
Q psy10722 42 SILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEE 98 (106)
Q Consensus 42 ~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~ 98 (106)
.+++...|+.++|+||..|..|.+. ..|..+ +..+.+++.+|-+|-||+..
T Consensus 116 ~~~y~~~G~~~~~~ivllHG~~~~~-~~w~~~-----~~~L~~~~~Via~DlpG~G~ 166 (383)
T PLN03084 116 RWFCVESGSNNNPPVLLIHGFPSQA-YSYRKV-----LPVLSKNYHAIAFDWLGFGF 166 (383)
T ss_pred EEEEEecCCCCCCeEEEECCCCCCH-HHHHHH-----HHHHhcCCEEEEECCCCCCC
Confidence 5667777887889999999999887 344433 56677899999999999964
No 24
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=92.83 E-value=0.65 Score=35.90 Aligned_cols=67 Identities=16% Similarity=0.235 Sum_probs=45.0
Q ss_pred CCCceeEEEecCCce-EEEEEeCC----CCCCeEEEeccCCCcchhcccccccchhHHHhh-cCceEEEEcCCCCCCC
Q psy10722 28 DPTVEEVYVETDRGS-ILVAVAGN----RGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL-ENFSVYHVNAPGQEEG 99 (106)
Q Consensus 28 ~~~~qe~~V~T~~G~-v~V~v~G~----~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~-~~f~i~HVdaPGqe~g 99 (106)
....++..+.+..|. ++...++. +.||+||..|..|.++ + | .+ ....+.+. ++|.+|-+|.||+...
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~-~-~--~~-~~~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDI-S-W--TF-QSTAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCc-c-e--eh-hHHHHHHHhCCCEEEEecCCCCCCC
Confidence 344456678887774 77766652 4577899999999765 2 1 11 22245565 4699999999999653
No 25
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=92.66 E-value=0.37 Score=30.91 Aligned_cols=40 Identities=30% Similarity=0.349 Sum_probs=21.0
Q ss_pred CCCCceeEEEecCCceE-EE--EEeCC------CCCCeEEEeccCCCcc
Q psy10722 27 TDPTVEEVYVETDRGSI-LV--AVAGN------RGKPAILTYHDLGLNY 66 (106)
Q Consensus 27 ~~~~~qe~~V~T~~G~v-~V--~v~G~------~~kPailTyHDvGlNh 66 (106)
.....++|.|.|+-|-+ .+ ...++ .+||++|..|.+..+.
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 35677999999999954 22 22233 5899999999998876
No 26
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=91.25 E-value=0.46 Score=38.98 Aligned_cols=50 Identities=18% Similarity=0.329 Sum_probs=38.8
Q ss_pred EEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 44 LVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 44 ~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
++++.|+.++|+||.+|..|.+. .+|. +.+..+.++|.++-+|-|||...
T Consensus 96 ~~~~~~~~~~p~vvllHG~~~~~-~~~~-----~~~~~L~~~~~vi~~D~rG~G~S 145 (402)
T PLN02894 96 TVTFDSKEDAPTLVMVHGYGASQ-GFFF-----RNFDALASRFRVIAIDQLGWGGS 145 (402)
T ss_pred EEEecCCCCCCEEEEECCCCcch-hHHH-----HHHHHHHhCCEEEEECCCCCCCC
Confidence 35666778899999999999876 3332 33566778899999999999654
No 27
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=91.01 E-value=0.88 Score=39.18 Aligned_cols=61 Identities=15% Similarity=0.247 Sum_probs=42.1
Q ss_pred ecCCceEEEEEeCCCC---CCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCC
Q psy10722 37 ETDRGSILVAVAGNRG---KPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEG 99 (106)
Q Consensus 37 ~T~~G~v~V~v~G~~~---kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~g 99 (106)
.|+...+++.++|..+ +|+||-.|..|.|. ..|... ..+...+. .++|.+|-+|.||+..-
T Consensus 182 ~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~-~~W~~~-~~~~L~~~~~~~yrVia~Dl~G~G~S 246 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFISSS-AFWTET-LFPNFSDAAKSTYRLFAVDLLGFGRS 246 (481)
T ss_pred eeCCeEEEEEEecCCCCCCCCeEEEECCCCccH-HHHHHH-HHHHHHHHhhCCCEEEEECCCCCCCC
Confidence 3444589999999543 68999999999997 333321 11333322 46899999999998643
No 28
>PRK07581 hypothetical protein; Validated
Probab=89.52 E-value=1.1 Score=34.73 Aligned_cols=56 Identities=16% Similarity=0.043 Sum_probs=36.8
Q ss_pred eEEEEEeCC---CCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCCC
Q psy10722 42 SILVAVAGN---RGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 42 ~v~V~v~G~---~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~gA 100 (106)
.+++...|+ .+.|+||..|-.|.++.. +.+.+ .....+ .++|.+|-+|.||+....
T Consensus 27 ~l~y~~~G~~~~~~~~~vll~~~~~~~~~~-~~~~~--~~~~~l~~~~~~vi~~D~~G~G~S~ 86 (339)
T PRK07581 27 RLAYKTYGTLNAAKDNAILYPTWYSGTHQD-NEWLI--GPGRALDPEKYFIIIPNMFGNGLSS 86 (339)
T ss_pred eEEEEecCccCCCCCCEEEEeCCCCCCccc-chhhc--cCCCccCcCceEEEEecCCCCCCCC
Confidence 466777885 356788888888877633 22111 111245 368999999999997654
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=89.50 E-value=0.63 Score=31.95 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=30.8
Q ss_pred CCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 53 KPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 53 kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
+|+||.+|..|-+.. +|. +-...+.+.|.++-+|.||+...
T Consensus 1 ~~~vv~~hG~~~~~~-~~~-----~~~~~L~~~~~v~~~d~~g~G~s 41 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQ-----ALIELLGPHFRCLAIDLPGHGSS 41 (251)
T ss_pred CCEEEEEcCCCCchh-hHH-----HHHHHhcccCeEEEEcCCCCCCC
Confidence 588999999988763 333 23455668899999999998543
No 30
>PRK10749 lysophospholipase L2; Provisional
Probab=88.67 E-value=2.6 Score=33.04 Aligned_cols=63 Identities=13% Similarity=0.122 Sum_probs=44.2
Q ss_pred eeEEEecCCc-eEEEEEeCC-CCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCCC
Q psy10722 32 EEVYVETDRG-SILVAVAGN-RGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 32 qe~~V~T~~G-~v~V~v~G~-~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~gA 100 (106)
++..+....| .+++...|. ..+|+||-.|.+|-.+ ..+..+ +..+ .++|.++=+|.|||..-.
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~-~~y~~~-----~~~l~~~g~~v~~~D~~G~G~S~ 96 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESY-VKYAEL-----AYDLFHLGYDVLIIDHRGQGRSG 96 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchH-HHHHHH-----HHHHHHCCCeEEEEcCCCCCCCC
Confidence 5555555555 689988874 5678999999998654 233222 3345 578999999999997543
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=88.33 E-value=0.88 Score=34.98 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=33.3
Q ss_pred CCCCeEEEeccCCCcchhcccccccchhHHHhh-cCceEEEEcCCCCCCC
Q psy10722 51 RGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL-ENFSVYHVNAPGQEEG 99 (106)
Q Consensus 51 ~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~-~~f~i~HVdaPGqe~g 99 (106)
+++|+||-.|..|.+. .||..+ ...|. ++|.++-+|-||+...
T Consensus 16 ~~~p~vvliHG~~~~~-~~w~~~-----~~~L~~~g~~vi~~dl~g~G~s 59 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCWYKI-----RCLMENSGYKVTCIDLKSAGID 59 (273)
T ss_pred CCCCeEEEECCCCCCc-CcHHHH-----HHHHHhCCCEEEEecccCCCCC
Confidence 5789999999999987 565444 44553 4799999999999743
No 32
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=88.10 E-value=0.61 Score=33.58 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=31.7
Q ss_pred CCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 52 GKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 52 ~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
.+|+||..|..|.++ .+|..+ +..+ ++|.+|-+|-||+..-
T Consensus 1 ~~p~vvllHG~~~~~-~~w~~~-----~~~l-~~~~vi~~D~~G~G~S 41 (242)
T PRK11126 1 GLPWLVFLHGLLGSG-QDWQPV-----GEAL-PDYPRLYIDLPGHGGS 41 (242)
T ss_pred CCCEEEEECCCCCCh-HHHHHH-----HHHc-CCCCEEEecCCCCCCC
Confidence 368999999999998 456544 3334 5799999999999643
No 33
>PLN02872 triacylglycerol lipase
Probab=87.90 E-value=1.6 Score=36.42 Aligned_cols=69 Identities=22% Similarity=0.347 Sum_probs=46.6
Q ss_pred cCCCCceeEEEecCCce-EEEEEe-------CCCCCCeEEEeccCCCcchhcccccccch--hHH-Hhh-cCceEEEEcC
Q psy10722 26 RTDPTVEEVYVETDRGS-ILVAVA-------GNRGKPAILTYHDLGLNYISNFQAFFNFS--DMR-SLL-ENFSVYHVNA 93 (106)
Q Consensus 26 ~~~~~~qe~~V~T~~G~-v~V~v~-------G~~~kPailTyHDvGlNh~scF~~ff~~~--~m~-ei~-~~f~i~HVda 93 (106)
+.....++|.|.|+-|- |++.-. |..+||++|.+|.++.+. .+| ..+.| .+. -+. +.|.++-.|.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss-~~w--~~~~~~~sla~~La~~GydV~l~n~ 115 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAG-DAW--FLNSPEQSLGFILADHGFDVWVGNV 115 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccc-cce--eecCcccchHHHHHhCCCCcccccc
Confidence 34567799999999884 444442 224589999999998876 333 33333 122 233 4799999999
Q ss_pred CCCC
Q psy10722 94 PGQE 97 (106)
Q Consensus 94 PGqe 97 (106)
+|..
T Consensus 116 RG~~ 119 (395)
T PLN02872 116 RGTR 119 (395)
T ss_pred cccc
Confidence 9964
No 34
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=87.53 E-value=1.2 Score=30.04 Aligned_cols=39 Identities=15% Similarity=0.405 Sum_probs=29.4
Q ss_pred EEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCC
Q psy10722 56 ILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 56 ilTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA 100 (106)
||..|..|.+. ..|..+ ++.+.++|.++-+|.||+....
T Consensus 1 vv~~hG~~~~~-~~~~~~-----~~~l~~~~~v~~~d~~G~G~s~ 39 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPL-----AEALARGYRVIAFDLPGHGRSD 39 (228)
T ss_dssp EEEE-STTTTG-GGGHHH-----HHHHHTTSEEEEEECTTSTTSS
T ss_pred eEEECCCCCCH-HHHHHH-----HHHHhCCCEEEEEecCCccccc
Confidence 68899999988 555554 4556689999999999986543
No 35
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=86.95 E-value=1.3 Score=34.74 Aligned_cols=55 Identities=13% Similarity=0.248 Sum_probs=34.5
Q ss_pred ceEEEEEeCCCCCCeEEEeccCCCcchh-----------cccccccchhHHHh-hcCceEEEEcCCCCCC
Q psy10722 41 GSILVAVAGNRGKPAILTYHDLGLNYIS-----------NFQAFFNFSDMRSL-LENFSVYHVNAPGQEE 98 (106)
Q Consensus 41 G~v~V~v~G~~~kPailTyHDvGlNh~s-----------cF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~ 98 (106)
..+++...|+.+.|+||--|-.|.+. . .|..+.. ..+.| .++|.+|.+|.||+..
T Consensus 46 ~~l~y~~~G~~~~p~vll~g~~~~~~-~~~~~~~~~~~~~w~~~v~--~~~~L~~~~~~Vi~~Dl~G~g~ 112 (343)
T PRK08775 46 LRLRYELIGPAGAPVVFVAGGISAHR-HVAATATFPEKGWWEGLVG--SGRALDPARFRLLAFDFIGADG 112 (343)
T ss_pred ceEEEEEeccCCCCEEEEecCCCccc-ccccccCCCCCCcchhccC--CCCccCccccEEEEEeCCCCCC
Confidence 46788888976667655555555543 3 3333321 11356 4789999999999853
No 36
>PF13899 Thioredoxin_7: Thioredoxin-like; PDB: 2LST_A 3PH9_A 1UC7_A 2JU5_A 1VRS_D 2FWG_A 2FWF_A 2FWH_A 2FWE_A 3FK8_A ....
Probab=86.53 E-value=1 Score=28.70 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=32.9
Q ss_pred CCCCeEEEeccCCCcchhcc---cccccchhHHH-hhcCceEEEEcC
Q psy10722 51 RGKPAILTYHDLGLNYISNF---QAFFNFSDMRS-LLENFSVYHVNA 93 (106)
Q Consensus 51 ~~kPailTyHDvGlNh~scF---~~ff~~~~m~e-i~~~f~i~HVda 93 (106)
.+||.+|-++--++- .|- ..+|+.|++++ +.++|..+.||.
T Consensus 16 ~~kpvlv~f~a~wC~--~C~~l~~~~~~~~~v~~~~~~~fv~v~vd~ 60 (82)
T PF13899_consen 16 EGKPVLVDFGADWCP--PCKKLEREVFSDPEVQEALNKNFVLVKVDV 60 (82)
T ss_dssp HTSEEEEEEETTTTH--HHHHHHHHTTTSHHHHHHHHHCSEEEEEET
T ss_pred cCCCEEEEEECCCCH--hHHHHHHHHcCCHHHHHHHHCCEEEEEEEc
Confidence 589999999755543 453 36789999999 799999999997
No 37
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=86.47 E-value=1.5 Score=35.37 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=37.0
Q ss_pred eEEEEEeCCC---CCCeEEEeccCCCcchhccccc---------ccc--hhHHHh-hcCceEEEEcCCCC
Q psy10722 42 SILVAVAGNR---GKPAILTYHDLGLNYISNFQAF---------FNF--SDMRSL-LENFSVYHVNAPGQ 96 (106)
Q Consensus 42 ~v~V~v~G~~---~kPailTyHDvGlNh~scF~~f---------f~~--~~m~ei-~~~f~i~HVdaPGq 96 (106)
.++..+.|+. ++|+||..|.+|.|+. ++..+ +.. ..-+.+ .++|.||-+|.||+
T Consensus 34 ~~~y~~~G~~~~~~~p~vvl~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~ 102 (379)
T PRK00175 34 ELAYETYGTLNADRSNAVLICHALTGDHH-VAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGG 102 (379)
T ss_pred eEEEEeccccCCCCCCEEEEeCCcCCchh-hcccccccCCCCcchhhccCCCCccCccceEEEeccCCCC
Confidence 5777888953 3799999999999995 33211 110 011244 67999999999994
No 38
>PRK10162 acetyl esterase; Provisional
Probab=86.45 E-value=3.6 Score=32.53 Aligned_cols=61 Identities=15% Similarity=0.088 Sum_probs=43.1
Q ss_pred CceeEEEecCCceEEEEEeC--CCCCCeEEEeccCCCcch--hcccccccchhHHHhhc--CceEEEEcCCC
Q psy10722 30 TVEEVYVETDRGSILVAVAG--NRGKPAILTYHDLGLNYI--SNFQAFFNFSDMRSLLE--NFSVYHVNAPG 95 (106)
Q Consensus 30 ~~qe~~V~T~~G~v~V~v~G--~~~kPailTyHDvGlNh~--scF~~ff~~~~m~ei~~--~f~i~HVdaPG 95 (106)
..++..|.++.|.+.+.++- ...+|+||-+|.=|.-.. ..+ ..-++.|.+ ++.|+.||.+.
T Consensus 56 ~~~~~~i~~~~g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~-----~~~~~~la~~~g~~Vv~vdYrl 122 (318)
T PRK10162 56 ATRAYMVPTPYGQVETRLYYPQPDSQATLFYLHGGGFILGNLDTH-----DRIMRLLASYSGCTVIGIDYTL 122 (318)
T ss_pred eEEEEEEecCCCceEEEEECCCCCCCCEEEEEeCCcccCCCchhh-----hHHHHHHHHHcCCEEEEecCCC
Confidence 35778888889988888874 445799999999774321 122 223566643 79999999764
No 39
>PHA02857 monoglyceride lipase; Provisional
Probab=84.55 E-value=1.2 Score=32.99 Aligned_cols=44 Identities=11% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCCCCCeEEEeccCCCcchhcccccccchhHHHhhc-CceEEEEcCCCCCC
Q psy10722 49 GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLE-NFSVYHVNAPGQEE 98 (106)
Q Consensus 49 G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~-~f~i~HVdaPGqe~ 98 (106)
+...+|.||-.|..|.+. ..|..+ ++.+.+ .+.+|-+|.||+..
T Consensus 21 ~~~~~~~v~llHG~~~~~-~~~~~~-----~~~l~~~g~~via~D~~G~G~ 65 (276)
T PHA02857 21 ITYPKALVFISHGAGEHS-GRYEEL-----AENISSLGILVFSHDHIGHGR 65 (276)
T ss_pred CCCCCEEEEEeCCCcccc-chHHHH-----HHHHHhCCCEEEEccCCCCCC
Confidence 345677888889999875 444333 556644 69999999999953
No 40
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=84.22 E-value=2.4 Score=33.41 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=37.2
Q ss_pred eEEEEEeCC---CCCCeEEEeccCCCcchh----------cccccccchhHHHh-hcCceEEEEcCCCC
Q psy10722 42 SILVAVAGN---RGKPAILTYHDLGLNYIS----------NFQAFFNFSDMRSL-LENFSVYHVNAPGQ 96 (106)
Q Consensus 42 ~v~V~v~G~---~~kPailTyHDvGlNh~s----------cF~~ff~~~~m~ei-~~~f~i~HVdaPGq 96 (106)
.+++..+|. ..+|+||..|.+|-|+.+ .|..+.. ..+.+ .++|.||-+|.||+
T Consensus 17 ~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~--~~~~l~~~~~~vi~~D~~G~ 83 (351)
T TIGR01392 17 RVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIG--PGRAIDTDRYFVVCSNVLGG 83 (351)
T ss_pred eEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccC--CCCCcCCCceEEEEecCCCC
Confidence 678888895 457899999999998743 1222211 01244 57899999999994
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=83.13 E-value=4.3 Score=39.71 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=36.3
Q ss_pred EEeCC-CCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCC
Q psy10722 46 AVAGN-RGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEE 98 (106)
Q Consensus 46 ~v~G~-~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~ 98 (106)
.-.|+ .++|+||..|..|.|.. .|.. -+..+.+++.+|.+|.||+..
T Consensus 1363 ~~~G~~~~~~~vVllHG~~~s~~-~w~~-----~~~~L~~~~rVi~~Dl~G~G~ 1410 (1655)
T PLN02980 1363 HEVGQNAEGSVVLFLHGFLGTGE-DWIP-----IMKAISGSARCISIDLPGHGG 1410 (1655)
T ss_pred EecCCCCCCCeEEEECCCCCCHH-HHHH-----HHHHHhCCCEEEEEcCCCCCC
Confidence 33464 45789999999999985 3433 366778889999999999964
No 42
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=82.81 E-value=5.2 Score=31.66 Aligned_cols=63 Identities=8% Similarity=0.175 Sum_probs=40.3
Q ss_pred EEecCCceEEEEEeC---CCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCC
Q psy10722 35 YVETDRGSILVAVAG---NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEG 99 (106)
Q Consensus 35 ~V~T~~G~v~V~v~G---~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~g 99 (106)
-++++.|.+....+- .+.+|+||-.|..|-+. .+....+. .-.+.+ ...|.++-+|.||+.+-
T Consensus 4 ~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~-~~~~~~~~-~la~~La~~Gy~Vl~~Dl~G~G~S 70 (266)
T TIGR03101 4 FLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEM-NKSRRMVA-LQARAFAAGGFGVLQIDLYGCGDS 70 (266)
T ss_pred EecCCCCcEEEEEecCCCCCCceEEEEECCCcccc-cchhHHHH-HHHHHHHHCCCEEEEECCCCCCCC
Confidence 456677877666664 33478999999988532 11111211 124555 36799999999998654
No 43
>PLN02511 hydrolase
Probab=82.42 E-value=9.5 Score=31.10 Aligned_cols=68 Identities=12% Similarity=0.139 Sum_probs=45.0
Q ss_pred CCceeEEEecCCc-eEEEEEe------CCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 29 PTVEEVYVETDRG-SILVAVA------GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 29 ~~~qe~~V~T~~G-~v~V~v~------G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
..++.+.++|+.| .+.+--. +..++|+||-+|.++-+..+. +...-...-+.++|.++-+|.||+..-
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~---y~~~~~~~~~~~g~~vv~~d~rG~G~s 143 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDS---YVRHMLLRARSKGWRVVVFNSRGCADS 143 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCH---HHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 4567788999875 4444221 346789999999997775432 222111222468899999999998643
No 44
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=80.71 E-value=3.1 Score=33.75 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=27.0
Q ss_pred CCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGAQP 102 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA~~ 102 (106)
+.+.|+||.||+-|-+...-++ ...-....++++.+|+.||....+.
T Consensus 80 ~~~~Pavv~~hGyg~~~~~~~~------~~~~a~~G~~vl~~d~rGqg~~~~d 126 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSGDPFD------LLPWAAAGYAVLAMDVRGQGGRSPD 126 (320)
T ss_dssp SSSEEEEEEE--TT--GGGHHH------HHHHHHTT-EEEEE--TTTSSSS-B
T ss_pred CCCcCEEEEecCCCCCCCCccc------ccccccCCeEEEEecCCCCCCCCCC
Confidence 5788999999999988543221 1223367899999999999954443
No 45
>PLN02965 Probable pheophorbidase
Probab=79.71 E-value=3.2 Score=30.75 Aligned_cols=39 Identities=13% Similarity=0.037 Sum_probs=30.1
Q ss_pred eEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCC
Q psy10722 55 AILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEG 99 (106)
Q Consensus 55 ailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~g 99 (106)
+||..|..|.|. .||. +-+..| ..+|.++-+|-||+..-
T Consensus 5 ~vvllHG~~~~~-~~w~-----~~~~~L~~~~~~via~Dl~G~G~S 44 (255)
T PLN02965 5 HFVFVHGASHGA-WCWY-----KLATLLDAAGFKSTCVDLTGAGIS 44 (255)
T ss_pred EEEEECCCCCCc-CcHH-----HHHHHHhhCCceEEEecCCcCCCC
Confidence 488899999886 4543 336677 66799999999999744
No 46
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=79.40 E-value=8.9 Score=29.47 Aligned_cols=57 Identities=12% Similarity=0.193 Sum_probs=38.5
Q ss_pred EEecCCc-eEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHH-h-hcCceEEEEcCCCCCCC
Q psy10722 35 YVETDRG-SILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRS-L-LENFSVYHVNAPGQEEG 99 (106)
Q Consensus 35 ~V~T~~G-~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~e-i-~~~f~i~HVdaPGqe~g 99 (106)
.+....| .++....|+++.++||..|..+.+.. +. .+.. + .++|.+|-+|.||+..-
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~-~~-------~~~~~~~~~~~~vi~~D~~G~G~S 67 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGT-DP-------GCRRFFDPETYRIVLFDQRGCGKS 67 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCC-CH-------HHHhccCccCCEEEEECCCCCCCC
Confidence 4444443 68888889777788999999766652 21 1111 1 25799999999998643
No 47
>KOG1454|consensus
Probab=78.59 E-value=8.5 Score=31.18 Aligned_cols=62 Identities=24% Similarity=0.329 Sum_probs=43.7
Q ss_pred CceeEEEecCCc--eEEEEEeCCC---------CCCeEEEeccCCCcchhcccccccchhHHHhhcC--ceEEEEcCCCC
Q psy10722 30 TVEEVYVETDRG--SILVAVAGNR---------GKPAILTYHDLGLNYISNFQAFFNFSDMRSLLEN--FSVYHVNAPGQ 96 (106)
Q Consensus 30 ~~qe~~V~T~~G--~v~V~v~G~~---------~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~--f~i~HVdaPGq 96 (106)
+..+..++-+.| .......|.. .+|+||-.|..|-|. |++=.+ |-.+.+. ..|+-||-||+
T Consensus 24 ~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~---~~w~~~---~~~L~~~~~~~v~aiDl~G~ 97 (326)
T KOG1454|consen 24 TLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASS---FSWRRV---VPLLSKAKGLRVLAIDLPGH 97 (326)
T ss_pred cccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCc---ccHhhh---ccccccccceEEEEEecCCC
Confidence 445666666777 5666666644 799999999999964 333333 5556555 78999999996
Q ss_pred C
Q psy10722 97 E 97 (106)
Q Consensus 97 e 97 (106)
.
T Consensus 98 g 98 (326)
T KOG1454|consen 98 G 98 (326)
T ss_pred C
Confidence 5
No 48
>KOG4409|consensus
Probab=77.84 E-value=5.2 Score=34.07 Aligned_cols=64 Identities=20% Similarity=0.271 Sum_probs=45.0
Q ss_pred CCceeEEEecCCce--EEEEEeC-CCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCC
Q psy10722 29 PTVEEVYVETDRGS--ILVAVAG-NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEE 98 (106)
Q Consensus 29 ~~~qe~~V~T~~G~--v~V~v~G-~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~ 98 (106)
..+....|..+.+. =++++.= ..+|++|+..|..|---.. .|-| +..|.+++++|-||-||-.-
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~---f~~N---f~~La~~~~vyaiDllG~G~ 129 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGL---FFRN---FDDLAKIRNVYAIDLLGFGR 129 (365)
T ss_pred CCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHH---HHHh---hhhhhhcCceEEecccCCCC
Confidence 34455666666432 3555554 5789999999999987633 2334 67777799999999999753
No 49
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=75.96 E-value=14 Score=28.28 Aligned_cols=50 Identities=8% Similarity=0.046 Sum_probs=34.2
Q ss_pred ceEEEEEeC-----CCCCCeEEEeccCCCcchhcccccccchhHHHhhc--CceEEEEcCC
Q psy10722 41 GSILVAVAG-----NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLE--NFSVYHVNAP 94 (106)
Q Consensus 41 G~v~V~v~G-----~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~--~f~i~HVdaP 94 (106)
..+.+.|+- ..+.|+|+.+|..|-++.+ +.+...++.+.. ++.|+-.|.+
T Consensus 25 ~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~----~~~~~~~~~la~~~g~~Vv~Pd~~ 81 (275)
T TIGR02821 25 VPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHEN----FMIKAGAQRFAAEHGLALVAPDTS 81 (275)
T ss_pred CceEEEEEcCCCccCCCCCEEEEccCCCCCccH----HHhhhHHHHHHhhcCcEEEEeCCC
Confidence 455566664 3468999999999988743 233334556643 7899999984
No 50
>PRK10566 esterase; Provisional
Probab=73.72 E-value=5.6 Score=28.99 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=30.5
Q ss_pred CCCCCeEEEeccCCCcchhcccccccchhHHHhh-cCceEEEEcCCCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL-ENFSVYHVNAPGQEE 98 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~-~~f~i~HVdaPGqe~ 98 (106)
+.++|+||.+|..|-+- ..|. .-.+.+. ..|.++-+|.||+..
T Consensus 24 ~~~~p~vv~~HG~~~~~-~~~~-----~~~~~l~~~G~~v~~~d~~g~G~ 67 (249)
T PRK10566 24 DTPLPTVFFYHGFTSSK-LVYS-----YFAVALAQAGFRVIMPDAPMHGA 67 (249)
T ss_pred CCCCCEEEEeCCCCccc-chHH-----HHHHHHHhCCCEEEEecCCcccc
Confidence 34579999999988764 3232 2345664 469999999999753
No 51
>KOG2624|consensus
Probab=69.07 E-value=7.9 Score=32.98 Aligned_cols=50 Identities=24% Similarity=0.246 Sum_probs=35.1
Q ss_pred cccCCCCceeEEEecCCce---EEEEEeCCCCCCeEEEeccCCCcchhcccccccc
Q psy10722 24 LARTDPTVEEVYVETDRGS---ILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNF 76 (106)
Q Consensus 24 ~~~~~~~~qe~~V~T~~G~---v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~ 76 (106)
...+...+++|.|.|.-|- +|=+-+|+.+||+++..|.+=.+. ..++.|-
T Consensus 41 i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS---~~Wv~n~ 93 (403)
T KOG2624|consen 41 IEKYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASS---SSWVLNG 93 (403)
T ss_pred HHHcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeecccccc---ccceecC
Confidence 3345567799999999885 333444568999999999886654 3355553
No 52
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=68.74 E-value=12 Score=24.25 Aligned_cols=52 Identities=12% Similarity=0.271 Sum_probs=37.5
Q ss_pred EEEEEeC-CC-CCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCCC
Q psy10722 43 ILVAVAG-NR-GKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 43 v~V~v~G-~~-~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~gA 100 (106)
|.+..+- +. .|.+|+-.|.+|-.. ..|..| ++.| .+.+.|+=.|-+||-.-.
T Consensus 4 L~~~~w~p~~~~k~~v~i~HG~~eh~-~ry~~~-----a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 4 LFYRRWKPENPPKAVVVIVHGFGEHS-GRYAHL-----AEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred EEEEEecCCCCCCEEEEEeCCcHHHH-HHHHHH-----HHHHHhCCCEEEEECCCcCCCCC
Confidence 4445544 33 388999999998665 445444 5666 789999999999997543
No 53
>cd02958 UAS UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. FAF1 is a longer protein, compared to the other members of this family, having additional N-terminal domains, a ubiquitin-associated UBA domain and a nuclear targeting domain. FAF1 is an apoptotic signaling molecule that acts downstream in the Fas signal transduction pathway. It interacts with the cytoplasmic domain of Fas, but not to a Fas mutant that is deficient in signal transduction. ETEA is the protein product of a highly expressed gene in T-cells and eosinophils of atopic dermatitis patients. The presence of the ubiquitin-associated UBX domain in the proteins of this family suggests the possibility of their involvement in ubiquitination. Recently, FAF1 has been shown to interact with valosin-containing protein (VCP),
Probab=67.50 E-value=7.1 Score=26.09 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=34.1
Q ss_pred CCCCeEEEeccCCC-cchhcccccccchhHHHh-hcCceEEEEcCCC
Q psy10722 51 RGKPAILTYHDLGL-NYISNFQAFFNFSDMRSL-LENFSVYHVNAPG 95 (106)
Q Consensus 51 ~~kPailTyHDvGl-Nh~scF~~ff~~~~m~ei-~~~f~i~HVdaPG 95 (106)
.+||.+|-+|.=.+ .++..=...|..+++++. .++|.++.+|+-.
T Consensus 16 ~~K~llv~~~~~~c~~c~~~~~~vl~~~~v~~~l~~~~v~~~~d~~~ 62 (114)
T cd02958 16 EKKWLLVYLQSEDEFDSQVLNRDLWSNESVKEFIRENFIFWQCDIDS 62 (114)
T ss_pred hCceEEEEEecCCcchHHHHHHHHcCCHHHHHHHHhCEEEEEecCCC
Confidence 68999999998776 333322357889999887 4699999999864
No 54
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=65.22 E-value=9.3 Score=27.92 Aligned_cols=44 Identities=9% Similarity=0.146 Sum_probs=30.3
Q ss_pred CCCCCeEEEeccCCCcchhcccccccchhHHHhh--cCceEEEEcCCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL--ENFSVYHVNAPGQE 97 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~--~~f~i~HVdaPGqe 97 (106)
+.++|+|+.+|..|-+... +.. + ..+.++. ..|.|+-+|.||+.
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~--~-~~~~~~a~~~g~~Vv~Pd~~g~~ 55 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVI--D-WGWKAAADRYGFVLVAPEQTSYN 55 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hhh--h-cChHHHHHhCCeEEEecCCcCcc
Confidence 3578999999999987633 211 1 1144443 56999999999974
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=64.86 E-value=58 Score=24.88 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=28.9
Q ss_pred CCCCCeEEEeccCCCcchhcccccccchhHHHhh-cCceEEEEcCCCCCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL-ENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~-~~f~i~HVdaPGqe~gA 100 (106)
+.+++++|-+|- |.++...-...+ ..-++.+. +.|.++-+|-||+....
T Consensus 23 ~~~~~~vv~i~g-g~~~~~g~~~~~-~~la~~l~~~G~~v~~~Dl~G~G~S~ 72 (274)
T TIGR03100 23 ASHTTGVLIVVG-GPQYRVGSHRQF-VLLARRLAEAGFPVLRFDYRGMGDSE 72 (274)
T ss_pred CCCCCeEEEEeC-CccccCCchhHH-HHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 445667777773 444422111111 22356664 56999999999998644
No 56
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=64.32 E-value=24 Score=29.22 Aligned_cols=52 Identities=13% Similarity=0.214 Sum_probs=36.2
Q ss_pred ceEEEEEeC---CCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCC
Q psy10722 41 GSILVAVAG---NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEE 98 (106)
Q Consensus 41 G~v~V~v~G---~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~ 98 (106)
+.+.+..++ ...||+||-.|..|.+. ..|. +-...+ .+.|.+|-+|.|||..
T Consensus 121 ~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~-~~~~-----~~a~~L~~~Gy~V~~~D~rGhG~ 176 (395)
T PLN02652 121 NALFCRSWAPAAGEMRGILIIIHGLNEHS-GRYL-----HFAKQLTSCGFGVYAMDWIGHGG 176 (395)
T ss_pred CEEEEEEecCCCCCCceEEEEECCchHHH-HHHH-----HHHHHHHHCCCEEEEeCCCCCCC
Confidence 356666665 24578999999998764 3332 224556 4589999999999953
No 57
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=62.55 E-value=28 Score=29.72 Aligned_cols=60 Identities=15% Similarity=0.222 Sum_probs=38.2
Q ss_pred ecCCc-eEEEEEe---CCCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCC
Q psy10722 37 ETDRG-SILVAVA---GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEE 98 (106)
Q Consensus 37 ~T~~G-~v~V~v~---G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~ 98 (106)
.+..| .|+..++ |+.++|+||.+|-.|-+..... .+.....+.+ .+.|.++-+|.+|+..
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~--~~~~~~~~~l~~~Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRW--GLDKTEPAWFVAQGYAVVIQDTRGRGA 66 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhcc--ccccccHHHHHhCCcEEEEEecccccc
Confidence 34445 5666666 4557899999998886532111 1122234455 6799999999999754
No 58
>cd02955 SSP411 TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif. The human/rat protein, called SSP411, is specifically expressed in the testis in an age-dependent manner. The SSP411 mRNA is increased during spermiogenesis and is localized in round and elongated spermatids, suggesting a function in fertility regulation.
Probab=59.09 E-value=12 Score=26.42 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=31.7
Q ss_pred CCCCCeEEEeccCCCcchhc--cc-ccccchhHHHh-hcCceEEEEcCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISN--FQ-AFFNFSDMRSL-LENFSVYHVNAPG 95 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~sc--F~-~ff~~~~m~ei-~~~f~i~HVdaPG 95 (106)
+.+||++|-|+--.+- .| +. .-|..|+..+. .++|++++||+..
T Consensus 13 ~~~KpVll~f~a~WC~--~Ck~me~~~f~~~~V~~~l~~~fv~VkvD~~~ 60 (124)
T cd02955 13 REDKPIFLSIGYSTCH--WCHVMEHESFEDEEVAAILNENFVPIKVDREE 60 (124)
T ss_pred HcCCeEEEEEccCCCH--hHHHHHHHccCCHHHHHHHhCCEEEEEEeCCc
Confidence 4689999988765553 34 32 45777777776 5799999999854
No 59
>COG0400 Predicted esterase [General function prediction only]
Probab=56.11 E-value=21 Score=27.53 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=38.3
Q ss_pred CCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCCCCCC
Q psy10722 49 GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGAQPLA 104 (106)
Q Consensus 49 G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA~~lp 104 (106)
+++..|.||.+|.+|-|..+ |+. -.+-+..+..++-+-.|=.++|+..+.
T Consensus 14 ~~p~~~~iilLHG~Ggde~~----~~~--~~~~~~P~~~~is~rG~v~~~g~~~~f 63 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELD----LVP--LPELILPNATLVSPRGPVAENGGPRFF 63 (207)
T ss_pred CCCCCcEEEEEecCCCChhh----hhh--hhhhcCCCCeEEcCCCCccccCcccce
Confidence 47888999999999999866 333 355678888888888877777776553
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=54.76 E-value=48 Score=21.94 Aligned_cols=41 Identities=12% Similarity=0.238 Sum_probs=28.8
Q ss_pred CCeEEEeccCCCcchhcccccccchhHHHhhc---CceEEEEcCCCCCCC
Q psy10722 53 KPAILTYHDLGLNYISNFQAFFNFSDMRSLLE---NFSVYHVNAPGQEEG 99 (106)
Q Consensus 53 kPailTyHDvGlNh~scF~~ff~~~~m~ei~~---~f~i~HVdaPGqe~g 99 (106)
+|.++-.|..+.++.. |.. .+..+.. +|.++.+|-||+...
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~d~~g~g~s 64 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRP-----VFKVLPALAARYRVIAPDLRGHGRS 64 (282)
T ss_pred CCeEEEeCCCCCchhh-hHH-----HHHHhhccccceEEEEecccCCCCC
Confidence 6699999999998833 333 1222322 299999999998764
No 61
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=52.61 E-value=20 Score=25.71 Aligned_cols=40 Identities=20% Similarity=0.522 Sum_probs=30.7
Q ss_pred CeEEEeccCCCcchhcccccccchhHHHhhcC-ceEEEEcCCCCCCC
Q psy10722 54 PAILTYHDLGLNYISNFQAFFNFSDMRSLLEN-FSVYHVNAPGQEEG 99 (106)
Q Consensus 54 PailTyHDvGlNh~scF~~ff~~~~m~ei~~~-f~i~HVdaPGqe~g 99 (106)
++++.+|..|=+ .++|..| .+.|... ..||=|..||...+
T Consensus 1 ~~lf~~p~~gG~-~~~y~~l-----a~~l~~~~~~v~~i~~~~~~~~ 41 (229)
T PF00975_consen 1 RPLFCFPPAGGS-ASSYRPL-----ARALPDDVIGVYGIEYPGRGDD 41 (229)
T ss_dssp -EEEEESSTTCS-GGGGHHH-----HHHHTTTEEEEEEECSTTSCTT
T ss_pred CeEEEEcCCccC-HHHHHHH-----HHhCCCCeEEEEEEecCCCCCC
Confidence 368899999984 4887666 5566776 99999999998743
No 62
>KOG4178|consensus
Probab=51.27 E-value=61 Score=27.21 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=39.9
Q ss_pred eeEEEecCCc-eEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcC-ceEEEEcCCCC
Q psy10722 32 EEVYVETDRG-SILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLEN-FSVYHVNAPGQ 96 (106)
Q Consensus 32 qe~~V~T~~G-~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~-f~i~HVdaPGq 96 (106)
-+|...|-+| .+|+.+.|....|+||+.|..=-+. +++-+. +..++.. +.++-+|-+|-
T Consensus 22 ~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~w---yswr~q---~~~la~~~~rviA~DlrGy 82 (322)
T KOG4178|consen 22 ISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESW---YSWRHQ---IPGLASRGYRVIAPDLRGY 82 (322)
T ss_pred cceeeEEEccEEEEEEeecCCCCCEEEEEccCCccc---hhhhhh---hhhhhhcceEEEecCCCCC
Confidence 3455555555 6788889999999999999875544 445555 6677666 45555555544
No 63
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=50.76 E-value=20 Score=33.25 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=31.9
Q ss_pred CCCeEEEeccCCCcchhcccccccchhHHHhh-cCceEEEEcCCCCCCC
Q psy10722 52 GKPAILTYHDLGLNYISNFQAFFNFSDMRSLL-ENFSVYHVNAPGQEEG 99 (106)
Q Consensus 52 ~kPailTyHDvGlNh~scF~~ff~~~~m~ei~-~~f~i~HVdaPGqe~g 99 (106)
.+|+|+..|.++-+.. .|..+ .+.+. +.|.++.+|.|||...
T Consensus 448 g~P~VVllHG~~g~~~-~~~~l-----A~~La~~Gy~VIaiDlpGHG~S 490 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-NALAF-----AGTLAAAGVATIAIDHPLHGAR 490 (792)
T ss_pred CCcEEEEeCCCCCCHH-HHHHH-----HHHHHhCCcEEEEeCCCCCCcc
Confidence 4679999999999874 34322 45564 6799999999999765
No 64
>cd02960 AGR Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of the cement gland and the induction of forebrain fate. The human homologs, hAG-2 and hAG-3, are secreted proteins associated with estrogen-positive breast tumors. Yeast two-hybrid studies identified the metastasis-associated C4.4a protein and dystroglycan as binding partners, indicating possible roles in the development and progression of breast cancer. hAG-2 has also been implicated in prostate cancer. Its gene was cloned as an androgen-inducible gene and it was shown to be overexpressed in prostate cancer cells at the mRNA and protein levels. AGR proteins contain one conserved cysteine corresponding to the first cysteine in the CXXC motif of TRX. They show high sequence similarity to ERp19.
Probab=48.84 E-value=32 Score=24.96 Aligned_cols=45 Identities=18% Similarity=0.277 Sum_probs=33.2
Q ss_pred CCCCCeEEEeccCCCcchhcc---cccccchhHHHhh-cCceEEEEcCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNF---QAFFNFSDMRSLL-ENFSVYHVNAPGQ 96 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF---~~ff~~~~m~ei~-~~f~i~HVdaPGq 96 (106)
+.+||++|-+|-=.+- .|- ..+|..++.++++ ++|..+.+++-+-
T Consensus 21 ~~~Kpvmv~f~sdwC~--~Ck~l~k~~f~~~eV~~~l~~~Fv~V~l~~d~t 69 (130)
T cd02960 21 KSNKPLMVIHHLEDCP--HSQALKKAFAEHKEIQKLAQEDFIMLNLVHETT 69 (130)
T ss_pred HCCCeEEEEEeCCcCH--hHHHHHHHhhCCHHHHHHHHhCeEEEEEEeccC
Confidence 4789988887764443 353 3679999999986 6999999986433
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=48.34 E-value=33 Score=22.35 Aligned_cols=38 Identities=18% Similarity=0.454 Sum_probs=28.5
Q ss_pred eEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCC
Q psy10722 55 AILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEE 98 (106)
Q Consensus 55 ailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~ 98 (106)
+||.+|..|-|. ..|..+ .+.+ .+.|.++-+|.||...
T Consensus 1 ~vv~~HG~~~~~-~~~~~~-----~~~l~~~G~~v~~~~~~~~~~ 39 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPL-----AEALAEQGYAVVAFDYPGHGD 39 (145)
T ss_dssp EEEEECTTTTTT-HHHHHH-----HHHHHHTTEEEEEESCTTSTT
T ss_pred CEEEECCCCCCH-HHHHHH-----HHHHHHCCCEEEEEecCCCCc
Confidence 588999999986 445444 4456 5579999999998764
No 66
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=47.21 E-value=17 Score=26.61 Aligned_cols=43 Identities=21% Similarity=0.322 Sum_probs=22.6
Q ss_pred CCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCC
Q psy10722 49 GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPG 95 (106)
Q Consensus 49 G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPG 95 (106)
.++++|.+|.+|..|-|. ..| ...........+..++-..||-
T Consensus 10 ~~~~~~lvi~LHG~G~~~-~~~---~~~~~~~~~~~~~~~i~p~ap~ 52 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSE-DLF---ALLAELNLALPNTRFISPRAPS 52 (216)
T ss_dssp SST-SEEEEEE--TTS-H-HHH---HHHHHHHTCSTTEEEEEE---E
T ss_pred CCCCceEEEEECCCCCCc-chh---HHHHhhcccCCceEEEeccCCC
Confidence 378899999999999998 322 2222222235677777777763
No 67
>PLN00021 chlorophyllase
Probab=45.77 E-value=51 Score=26.54 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=30.1
Q ss_pred CCCCCCeEEEeccCCCcchhcccccccchhHHHhhc-CceEEEEcCCCC
Q psy10722 49 GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLE-NFSVYHVNAPGQ 96 (106)
Q Consensus 49 G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~-~f~i~HVdaPGq 96 (106)
...+.|+||.+|+.|.+. ..+.. -++.|.+ .|.++-+|-+|.
T Consensus 48 ~~g~~PvVv~lHG~~~~~-~~y~~-----l~~~Las~G~~VvapD~~g~ 90 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLYN-SFYSQ-----LLQHIASHGFIVVAPQLYTL 90 (313)
T ss_pred CCCCCCEEEEECCCCCCc-ccHHH-----HHHHHHhCCCEEEEecCCCc
Confidence 356789999999999875 22222 2456654 599999998884
No 68
>PRK10985 putative hydrolase; Provisional
Probab=44.47 E-value=1.5e+02 Score=23.11 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=39.8
Q ss_pred eeEEEecCCce-EEEEEeC----CCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCC
Q psy10722 32 EEVYVETDRGS-ILVAVAG----NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQE 97 (106)
Q Consensus 32 qe~~V~T~~G~-v~V~v~G----~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe 97 (106)
..+.+.|+.|. +...... +.++|++|-+|.++-++.+- +. ..-++.+ .+.|.++=.|.+|+.
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~---~~-~~~~~~l~~~G~~v~~~d~rG~g 99 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSP---YA-HGLLEAAQKRGWLGVVMHFRGCS 99 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCH---HH-HHHHHHHHHCCCEEEEEeCCCCC
Confidence 45668888764 3333221 34689999999887775331 21 1123445 567889999999985
No 69
>TIGR01694 MTAP 5'-deoxy-5'-methylthioadenosine phosphorylase. In between the trusted and noise cutoffs are: 1) several archaeal sequences which appear to contain several residues characteristic of phosphorylases which act on guanosine or inosine (according to the crystal structure of MTAP and alignments). In any case, these residues are not conserved. 2) sequences from Mycobacterium tuberculosis and Streptomyces coelicolor which have better, although not perfect retention of the active site residues, but considering the general observation that bacteria utilize the MTA/SAH nucleotidase enzyme and a kinase to do this reaction, these have been excluded pending stronger evidence of their function, and 3) a sequence from Drosophila which appears to be a recent divergence (long branch in neighbor-joining trees) and lacks some of the conserved active site residues.
Probab=42.19 E-value=27 Score=26.89 Aligned_cols=37 Identities=32% Similarity=0.385 Sum_probs=25.9
Q ss_pred CceeEEEecCCceEE-EEEeCC-CCCCeEE-EeccCCCcc
Q psy10722 30 TVEEVYVETDRGSIL-VAVAGN-RGKPAIL-TYHDLGLNY 66 (106)
Q Consensus 30 ~~qe~~V~T~~G~v~-V~v~G~-~~kPail-TyHDvGlNh 66 (106)
+..+..++||||.+. ....|. .++|+++ ..|.+|-+|
T Consensus 18 ~~~~~~~~tp~g~~~~~~~~G~~~g~~vv~~~~~G~g~~~ 57 (241)
T TIGR01694 18 DVEEVNVDTPYGNPSAPIVVGRVAGVDVAFLPRHGRGHDI 57 (241)
T ss_pred cceEEEEECCCCCCCCCEEEEEECCEEEEEEeCCCCCCcc
Confidence 447889999999764 333452 4566665 999999855
No 70
>PRK11071 esterase YqiA; Provisional
Probab=37.91 E-value=31 Score=25.26 Aligned_cols=43 Identities=12% Similarity=0.023 Sum_probs=27.0
Q ss_pred CeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCC
Q psy10722 54 PAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQE 97 (106)
Q Consensus 54 PailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe 97 (106)
|+||-.|..|.+..+ |..-.--+-+++...++.++-+|-||+-
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~l~~~~~~~~v~~~dl~g~~ 44 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNWLAQHHPDIEMIVPQLPPYP 44 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHHHHHhCCCCeEEeCCCCCCH
Confidence 789999999999854 2210001112222236889999999973
No 71
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=34.39 E-value=37 Score=26.49 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=29.7
Q ss_pred CCCCCeEEEeccCCCcchhcccccccchhHHHhh--cCceEEEEcCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL--ENFSVYHVNAPGQ 96 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~--~~f~i~HVdaPGq 96 (106)
+.++|++|-.|..+-|....+ ...-.+.++ +.+.|+-||-+|+
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~----~~~l~~~ll~~~~~nVi~vD~~~~ 77 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESW----ISDLRKAYLSRGDYNVIVVDWGRG 77 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcH----HHHHHHHHHhcCCCEEEEEECccc
Confidence 577899999999988762221 111123343 5799999999987
No 72
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=33.88 E-value=79 Score=26.69 Aligned_cols=52 Identities=13% Similarity=0.330 Sum_probs=35.6
Q ss_pred EEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCCC
Q psy10722 43 ILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEGA 100 (106)
Q Consensus 43 v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~gA 100 (106)
+-+=..++.++|+|+-||.-|-+.---+ ..++. -...+.+.-.|..||....
T Consensus 73 lvlP~~~~~~~P~vV~fhGY~g~~g~~~-~~l~w-----a~~Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 73 LVLPRHEKGKLPAVVQFHGYGGRGGEWH-DMLHW-----AVAGYAVFVMDVRGQGSSS 124 (321)
T ss_pred EEeecccCCccceEEEEeeccCCCCCcc-ccccc-----cccceeEEEEecccCCCcc
Confidence 3333445689999999999999872111 12222 1568899999999998663
No 73
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=33.87 E-value=45 Score=22.84 Aligned_cols=45 Identities=20% Similarity=0.342 Sum_probs=29.3
Q ss_pred CCCCCeEEEeccCCCcchhccc-ccccchhHHHhhcCceEEEEcCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQ-AFFNFSDMRSLLENFSVYHVNAP 94 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~-~ff~~~~m~ei~~~f~i~HVdaP 94 (106)
+.+||++|-|+--.+-+=--+. .|...++..++..+|..+.+|.-
T Consensus 17 ~~~kpVlV~F~a~WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~ 62 (117)
T cd02959 17 DSGKPLMLLIHKTWCGACKALKPKFAESKEISELSHNFVMVNLEDD 62 (117)
T ss_pred HcCCcEEEEEeCCcCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCC
Confidence 3689999999965554311122 34444555556678999999964
No 74
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=33.56 E-value=41 Score=25.00 Aligned_cols=42 Identities=31% Similarity=0.510 Sum_probs=20.6
Q ss_pred CCCeEEEeccCCCcchhcccccccchhH-HHhhc-CceEEEEcCCCC
Q psy10722 52 GKPAILTYHDLGLNYISNFQAFFNFSDM-RSLLE-NFSVYHVNAPGQ 96 (106)
Q Consensus 52 ~kPailTyHDvGlNh~scF~~ff~~~~m-~ei~~-~f~i~HVdaPGq 96 (106)
+|+.||.+|.-|.|- .-|+.= ...+ +.|.+ .+-++-+|+|=-
T Consensus 3 ~k~riLcLHG~~~na-~if~~q--~~~l~~~l~~~~~ef~f~dgP~~ 46 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA-EIFRQQ--TSALRKALKKLDFEFVFVDGPHE 46 (212)
T ss_dssp ---EEEEE--TT--H-HHHHHH--THHHHHHHHHTT-EEEEE--SEE
T ss_pred CCceEEEeCCCCcCH-HHHHHH--HHHHHHHHhhCcEEEEEecCCcc
Confidence 789999999999997 434422 2223 44455 799999998843
No 75
>KOG2564|consensus
Probab=33.55 E-value=1.6e+02 Score=25.10 Aligned_cols=61 Identities=23% Similarity=0.250 Sum_probs=42.3
Q ss_pred eeEEEecCC--ceEEEEEeCC--CCCCeEEEeccCCCcchhcccccccchhHHHh---hcCceEEEEcCCCCCCC
Q psy10722 32 EEVYVETDR--GSILVAVAGN--RGKPAILTYHDLGLNYISNFQAFFNFSDMRSL---LENFSVYHVNAPGQEEG 99 (106)
Q Consensus 32 qe~~V~T~~--G~v~V~v~G~--~~kPailTyHDvGlNh~scF~~ff~~~~m~ei---~~~f~i~HVdaPGqe~g 99 (106)
++.+|.-+. +.+.++..+. ..-|.++..|.-|..-.| |..| .+|| .+.-| +-.|..||.+-
T Consensus 49 ekedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LS-fA~~-----a~el~s~~~~r~-~a~DlRgHGeT 116 (343)
T KOG2564|consen 49 EKEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALS-FAIF-----ASELKSKIRCRC-LALDLRGHGET 116 (343)
T ss_pred cccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchh-HHHH-----HHHHHhhcceeE-EEeeccccCcc
Confidence 666777655 4577777774 577899999999987633 5444 4555 33334 78999999763
No 76
>COG3167 PilO Tfp pilus assembly protein PilO [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=33.35 E-value=36 Score=27.12 Aligned_cols=27 Identities=33% Similarity=0.613 Sum_probs=21.2
Q ss_pred eEEEEEeCC-----------CCCCeEEEeccCCCcchh
Q psy10722 42 SILVAVAGN-----------RGKPAILTYHDLGLNYIS 68 (106)
Q Consensus 42 ~v~V~v~G~-----------~~kPailTyHDvGlNh~s 68 (106)
++.+-|.|. ..-|-|||+||+-+--++
T Consensus 138 Pisi~v~G~YHdia~F~~~VasLpRIiTl~d~~i~~~~ 175 (211)
T COG3167 138 PISISVTGSYHDIAQFVSDVASLPRIITLHDLKIKPVP 175 (211)
T ss_pred ceEEEEcccHHHHHHHHHHHhhcceeeeeecceeccCC
Confidence 577777784 678889999999876544
No 77
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=32.07 E-value=1.4e+02 Score=23.68 Aligned_cols=56 Identities=18% Similarity=0.266 Sum_probs=34.2
Q ss_pred EEEEEeC-CCCCCeEEEeccCCCcchhccc------------------ccccc--hhHHHh-hcCceEEEEcCCCCCC
Q psy10722 43 ILVAVAG-NRGKPAILTYHDLGLNYISNFQ------------------AFFNF--SDMRSL-LENFSVYHVNAPGQEE 98 (106)
Q Consensus 43 v~V~v~G-~~~kPailTyHDvGlNh~scF~------------------~ff~~--~~m~ei-~~~f~i~HVdaPGqe~ 98 (106)
|++..+- +.-|.+|+-.|.+|--..+-|. .++.+ .-++.+ .+.|.|+-+|-|||..
T Consensus 10 l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~ 87 (332)
T TIGR01607 10 LKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGE 87 (332)
T ss_pred EEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCC
Confidence 4444443 3345688888888766543221 12111 224566 5689999999999974
No 78
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=31.28 E-value=56 Score=29.99 Aligned_cols=42 Identities=19% Similarity=0.371 Sum_probs=32.4
Q ss_pred CCCeEEEeccCCCcchhcccccccchhHHHhhcCceEEEEcCCCCCCC
Q psy10722 52 GKPAILTYHDLGLNYISNFQAFFNFSDMRSLLENFSVYHVNAPGQEEG 99 (106)
Q Consensus 52 ~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~f~i~HVdaPGqe~g 99 (106)
++|+++.+|..|-+. .+|..+ .+.+..++.+|-++.||++..
T Consensus 1067 ~~~~l~~lh~~~g~~-~~~~~l-----~~~l~~~~~v~~~~~~g~~~~ 1108 (1296)
T PRK10252 1067 DGPTLFCFHPASGFA-WQFSVL-----SRYLDPQWSIYGIQSPRPDGP 1108 (1296)
T ss_pred CCCCeEEecCCCCch-HHHHHH-----HHhcCCCCcEEEEECCCCCCC
Confidence 357899999999987 555444 445667899999999999743
No 79
>PLN02634 probable pectinesterase
Probab=31.18 E-value=76 Score=26.87 Aligned_cols=32 Identities=13% Similarity=0.157 Sum_probs=23.7
Q ss_pred EEEecCCceEEEEEeCCCCCCeEEEeccCCCc
Q psy10722 34 VYVETDRGSILVAVAGNRGKPAILTYHDLGLN 65 (106)
Q Consensus 34 ~~V~T~~G~v~V~v~G~~~kPailTyHDvGlN 65 (106)
+.|.-+..+-.|+++|+....++|||.|...+
T Consensus 97 EkV~Ip~~k~~ItL~G~g~~~TiIt~~~~a~~ 128 (359)
T PLN02634 97 EKVVVPATKPYITFQGAGRDVTAIEWHDRASD 128 (359)
T ss_pred EEEEEcCCCCeEEEEecCCCceEEEecccccc
Confidence 33444445667899998888999999987654
No 80
>KOG1455|consensus
Probab=30.81 E-value=1.7e+02 Score=24.68 Aligned_cols=62 Identities=21% Similarity=0.398 Sum_probs=42.0
Q ss_pred ceeEEEecCCceEEEEEe-----CCCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCC
Q psy10722 31 VEEVYVETDRGSILVAVA-----GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQE 97 (106)
Q Consensus 31 ~qe~~V~T~~G~v~V~v~-----G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe 97 (106)
..+--++++.|.--.|-. |..-|-.|+-.|..|--+..-|+.+ +.-+ ..+|.+|-+|-+||.
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~-----a~~l~~~g~~v~a~D~~GhG 94 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQST-----AKRLAKSGFAVYAIDYEGHG 94 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHH-----HHHHHhCCCeEEEeeccCCC
Confidence 355667778885444433 1244558889999998764433333 4444 889999999999985
No 81
>PRK11460 putative hydrolase; Provisional
Probab=29.88 E-value=73 Score=23.92 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=26.9
Q ss_pred CCCCCeEEEeccCCCcchhcccccccchhHHHhh---cCceEEEEcCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL---ENFSVYHVNAPGQ 96 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~---~~f~i~HVdaPGq 96 (106)
.+.+|.||.+|..|-|-. .|.++ .+.+. .+..++-+++|..
T Consensus 13 ~~~~~~vIlLHG~G~~~~-~~~~l-----~~~l~~~~~~~~~i~~~g~~~ 56 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPV-AMGEI-----GSWFAPAFPDALVVSVGGPEP 56 (232)
T ss_pred CCCCcEEEEEeCCCCChH-HHHHH-----HHHHHHHCCCCEEECCCCCCC
Confidence 567889999999999973 34333 23343 3446677777753
No 82
>PLN03090 auxin-responsive family protein; Provisional
Probab=28.15 E-value=74 Score=22.62 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=23.5
Q ss_pred ecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhhcC
Q psy10722 37 ETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLLEN 85 (106)
Q Consensus 37 ~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~~~ 85 (106)
.++.|-+-|+| |+..|.-++-. .++++|..++|++.
T Consensus 39 ~vpkG~~aVyV-G~~~~RfvVp~------------~~L~hP~F~~LL~~ 74 (104)
T PLN03090 39 DVPKGHFPVYV-GENRSRYIVPI------------SFLTHPEFQSLLQQ 74 (104)
T ss_pred CCCCCcEEEEE-CCCCEEEEEEH------------HHcCCHHHHHHHHH
Confidence 35789999987 66555555431 35677777777543
No 83
>KOG0322|consensus
Probab=27.94 E-value=58 Score=27.42 Aligned_cols=28 Identities=29% Similarity=0.341 Sum_probs=22.6
Q ss_pred ceEEEEEeCCCCCCeEEEeccCCCcchh
Q psy10722 41 GSILVAVAGNRGKPAILTYHDLGLNYIS 68 (106)
Q Consensus 41 G~v~V~v~G~~~kPailTyHDvGlNh~s 68 (106)
|.++|+=+-.-+--|+|+||--|.|..+
T Consensus 273 ~RiRVyswrtl~pLAVLkyHsagvn~vA 300 (323)
T KOG0322|consen 273 HRIRVYSWRTLNPLAVLKYHSAGVNAVA 300 (323)
T ss_pred CcEEEEEeccCCchhhhhhhhcceeEEE
Confidence 6777777766666699999999999854
No 84
>cd02783 MopB_CT_2 The MopB_CT_2 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=27.38 E-value=1.6e+02 Score=21.13 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=25.1
Q ss_pred CceeEEEecCCceEEEEEeC-CCCCC-eEEEeccCCCcc
Q psy10722 30 TVEEVYVETDRGSILVAVAG-NRGKP-AILTYHDLGLNY 66 (106)
Q Consensus 30 ~~qe~~V~T~~G~v~V~v~G-~~~kP-ailTyHDvGlNh 66 (106)
+.+...|.++.|.+.+.++= +.-+| +|..+|-+|..+
T Consensus 48 dGd~V~v~s~~G~~~~~a~v~~~i~~g~v~~~~~~~~~~ 86 (156)
T cd02783 48 DGDWVWVESVNGRVKGQARFTETVEPGTVWTWNAIGKRP 86 (156)
T ss_pred CCCEEEEEcCCeeEEEEEEECCCcCCCeEEEEccccccc
Confidence 44778999999998877764 22333 666677766643
No 85
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=26.45 E-value=3.2e+02 Score=23.35 Aligned_cols=72 Identities=21% Similarity=0.197 Sum_probs=51.7
Q ss_pred CCceeEEEecCCce-EEEEEeC---CCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCCCCCCC
Q psy10722 29 PTVEEVYVETDRGS-ILVAVAG---NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEEGAQPL 103 (106)
Q Consensus 29 ~~~qe~~V~T~~G~-v~V~v~G---~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~gA~~l 103 (106)
+.+..+.|+|+.|. +...-.. ++++|-+|-+|.+-=+..+ + +-..-|+.+ .+.|-++=.++-|+..-+...
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s---~-y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~ 122 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNS---P-YARGLMRALSRRGWLVVVFHFRGCSGEANTS 122 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcC---H-HHHHHHHHHHhcCCeEEEEecccccCCcccC
Confidence 45577799999864 4554444 6899999999987554433 2 344556777 788999999999998766655
Q ss_pred C
Q psy10722 104 A 104 (106)
Q Consensus 104 p 104 (106)
|
T Consensus 123 p 123 (345)
T COG0429 123 P 123 (345)
T ss_pred c
Confidence 4
No 86
>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []. Proteins from this ARG7 auxin responsive genes family have no identified functional role [].
Probab=26.44 E-value=74 Score=21.98 Aligned_cols=21 Identities=19% Similarity=0.411 Sum_probs=14.8
Q ss_pred EecCCceEEEEEeCCCCCCeEE
Q psy10722 36 VETDRGSILVAVAGNRGKPAIL 57 (106)
Q Consensus 36 V~T~~G~v~V~v~G~~~kPail 57 (106)
...|.|-+.|+| |+..|.-+|
T Consensus 34 ~~vp~G~~~VyV-G~~~~Rfvv 54 (100)
T PF02519_consen 34 SDVPKGHFAVYV-GEERRRFVV 54 (100)
T ss_pred CCCCCCeEEEEe-CccceEEEe
Confidence 556789999998 775555444
No 87
>PF10531 SLBB: SLBB domain; InterPro: IPR019554 The soluble ligand-binding beta-grasp domain (SLBB) contains a beta-grasp fold. They are found in a diverse set of proteins that include the animal vitamin B12 uptake proteins; transcobalamin, intrinsic factor and the bacterial polysaccharide export proteins []. Some proteins may be part of a membrane complex involved in electron transport, others are probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium.; PDB: 3IAS_S 2FUG_A 3I9V_A 3M9S_1 3IAM_A 2YBB_1 2W8I_E 2W8H_E 2J58_D.
Probab=26.25 E-value=92 Score=18.77 Aligned_cols=23 Identities=22% Similarity=0.369 Sum_probs=17.8
Q ss_pred EEEEeCCCCCCeEEEeccCCCcch
Q psy10722 44 LVAVAGNRGKPAILTYHDLGLNYI 67 (106)
Q Consensus 44 ~V~v~G~~~kPailTyHDvGlNh~ 67 (106)
.|+|.|+-++|-.+.+.. |++-.
T Consensus 1 ~V~V~G~V~~PG~~~~~~-g~tl~ 23 (59)
T PF10531_consen 1 TVTVSGEVNRPGTYELPP-GTTLS 23 (59)
T ss_dssp EEEEECSBSS-EEEEEET-T-BHH
T ss_pred CEEEEEEeCCCEEEEECC-CCcHH
Confidence 489999999999999988 77653
No 88
>PLN02176 putative pectinesterase
Probab=26.12 E-value=92 Score=26.12 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=23.8
Q ss_pred eEEEecCCceEEEEEeCCCCCCeEEEeccCC
Q psy10722 33 EVYVETDRGSILVAVAGNRGKPAILTYHDLG 63 (106)
Q Consensus 33 e~~V~T~~G~v~V~v~G~~~kPailTyHDvG 63 (106)
.+.|.-+..+-.|+++|+....+||||.|-+
T Consensus 79 ~EkV~Ip~~k~~vtl~G~g~~~TiIt~~~~~ 109 (340)
T PLN02176 79 REKVTIPKEKGYIYMQGKGIEKTIIAYGDHQ 109 (340)
T ss_pred EEEEEECCCCccEEEEEcCCCceEEEEeCCc
Confidence 3455556666778899988888999998865
No 89
>smart00594 UAS UAS domain.
Probab=26.04 E-value=1e+02 Score=20.91 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=32.1
Q ss_pred CCCCeEEEeccCCCcchhcc---cccccchhHHHh-hcCceEEEEcCCCC
Q psy10722 51 RGKPAILTYHDLGLNYISNF---QAFFNFSDMRSL-LENFSVYHVNAPGQ 96 (106)
Q Consensus 51 ~~kPailTyHDvGlNh~scF---~~ff~~~~m~ei-~~~f~i~HVdaPGq 96 (106)
.+|+.+|-+|.=. |..|- ...|..+++.++ .++|.++.+|+..-
T Consensus 26 ~~K~~lv~~~~~~--c~~c~~~~r~vl~~~~V~~~i~~~fv~~~~dv~~~ 73 (122)
T smart00594 26 QRRLLWLYLHSQD--SPDSQVFNRDVLCNEAVKSLIRENFIFWQVDVDTS 73 (122)
T ss_pred hcCCEEEEEeCCC--CchHHHHHHHHccCHHHHHHHHcCEEEEEecCCCh
Confidence 6789999988754 33443 256888999888 55899999997643
No 90
>PLN02442 S-formylglutathione hydrolase
Probab=24.45 E-value=3.3e+02 Score=20.98 Aligned_cols=63 Identities=10% Similarity=0.023 Sum_probs=39.7
Q ss_pred CceeEEEecC--CceEEEEEe---C--CCCCCeEEEeccCCCcchhcccccccchhHHHh--hcCceEEEEcCCCC
Q psy10722 30 TVEEVYVETD--RGSILVAVA---G--NRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL--LENFSVYHVNAPGQ 96 (106)
Q Consensus 30 ~~qe~~V~T~--~G~v~V~v~---G--~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei--~~~f~i~HVdaPGq 96 (106)
.+....+..+ ...+.+.|+ + .++.|+|+-+|..+-+... +.+...++.+ ...+.|+=.|.+++
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~----~~~~~~~~~~~~~~g~~Vv~pd~~~~ 88 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDEN----FIQKSGAQRAAAARGIALVAPDTSPR 88 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHH----HHHhhhHHHHHhhcCeEEEecCCCCC
Confidence 3345555554 247777776 2 3578999999987766532 2222334445 34888999987654
No 91
>PF03373 Octapeptide: Octapeptide repeat; InterPro: IPR005038 This octapeptide repeat is found in several bacterial proteins. The function of this repeat is unknown.; GO: 0019865 immunoglobulin binding
Probab=23.09 E-value=41 Score=13.99 Aligned_cols=7 Identities=43% Similarity=1.051 Sum_probs=5.1
Q ss_pred CCCCCCC
Q psy10722 94 PGQEEGA 100 (106)
Q Consensus 94 PGqe~gA 100 (106)
||.|++-
T Consensus 1 PgkeDnn 7 (8)
T PF03373_consen 1 PGKEDNN 7 (8)
T ss_pred Ccccccc
Confidence 7888763
No 92
>PF04199 Cyclase: Putative cyclase; InterPro: IPR007325 Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form a part of the active site.; PDB: 2B0A_A 3KRV_A 1R61_A.
Probab=23.08 E-value=30 Score=24.69 Aligned_cols=10 Identities=30% Similarity=0.644 Sum_probs=6.9
Q ss_pred eEEEEcCCCC
Q psy10722 87 SVYHVNAPGQ 96 (106)
Q Consensus 87 ~i~HVdaPGq 96 (106)
+-=|+|||+|
T Consensus 51 ~GTHiDap~H 60 (171)
T PF04199_consen 51 TGTHIDAPAH 60 (171)
T ss_dssp SSSEEE-GGG
T ss_pred ccCCCccccc
Confidence 3359999999
No 93
>PF08909 DUF1854: Domain of unknown function (DUF1854); InterPro: IPR015005 These protein is functionally uncharacterised. It is found at the C terminus of a number of ATP transporter proteins suggesting it may be involved in ligand binding.
Probab=22.97 E-value=82 Score=23.23 Aligned_cols=19 Identities=37% Similarity=0.426 Sum_probs=16.9
Q ss_pred ceeEEEecCCceEEEEEeC
Q psy10722 31 VEEVYVETDRGSILVAVAG 49 (106)
Q Consensus 31 ~qe~~V~T~~G~v~V~v~G 49 (106)
.-.-.|+|.+|...++++|
T Consensus 73 p~~W~VeTdrG~t~f~l~g 91 (133)
T PF08909_consen 73 PSTWDVETDRGPTRFVLKG 91 (133)
T ss_pred CcEEEEEecCCcEEEEEcC
Confidence 3567999999999999999
No 94
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=22.83 E-value=97 Score=19.80 Aligned_cols=42 Identities=12% Similarity=0.241 Sum_probs=27.4
Q ss_pred CCCCeEEEeccCCCcchhcc--c-ccccchhHHHhhc-CceEEEEcCC
Q psy10722 51 RGKPAILTYHDLGLNYISNF--Q-AFFNFSDMRSLLE-NFSVYHVNAP 94 (106)
Q Consensus 51 ~~kPailTyHDvGlNh~scF--~-~ff~~~~m~ei~~-~f~i~HVdaP 94 (106)
.+||+||-|+--.+- .|- . .++..+.+++..+ ++.++.||+-
T Consensus 10 ~~k~vlv~f~a~wC~--~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 55 (104)
T cd02953 10 QGKPVFVDFTADWCV--TCKVNEKVVFSDPEVQAALKKDVVLLRADWT 55 (104)
T ss_pred cCCeEEEEEEcchhH--HHHHHHHHhcCCHHHHHHHhCCeEEEEEecC
Confidence 568888888854444 353 2 2344566766644 8999999964
No 95
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=22.74 E-value=1.3e+02 Score=25.90 Aligned_cols=45 Identities=13% Similarity=0.228 Sum_probs=31.0
Q ss_pred CCCCCeEEEeccCCCcchhcccccccchhHH-Hhh---cCceEEEEcCCCCCC
Q psy10722 50 NRGKPAILTYHDLGLNYISNFQAFFNFSDMR-SLL---ENFSVYHVNAPGQEE 98 (106)
Q Consensus 50 ~~~kPailTyHDvGlNh~scF~~ff~~~~m~-ei~---~~f~i~HVdaPGqe~ 98 (106)
+.++|++|..|..+.+. .+..+ .+.|. .+. .++.||-||-||+..
T Consensus 38 n~~~ptvIlIHG~~~s~--~~~~w--~~~l~~al~~~~~d~nVI~VDw~g~g~ 86 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTG--MFESW--VPKLVAALYEREPSANVIVVDWLSRAQ 86 (442)
T ss_pred CCCCCeEEEECCCCcCC--cchhh--HHHHHHHHHhccCCCEEEEEECCCcCC
Confidence 67899999999998753 22222 23343 333 369999999999853
No 96
>TIGR03035 trp_arylform arylformamidase. One of several pathways of tryptophan degradation is as follows: tryptophan 2,3-dioxygenase (1.13.11.11) uses 02 to convert Trp to L-formylkynurenine. Arylformamidase (3.5.1.9) hydrolyzes the product to L-kynurenine and formate. Kynureninase (3.7.1.3) hydrolyzes L-kynurenine to anthranilate plus alanine. Members of the seed alignment for this model are bacterial predicted metal-dependent hydrolases. All are supported as arylformamidase (3.5.1.9) by an operon structure in which kynureninase and/or tryptophan 2,3-dioxygenase genes are adjacent. The members from Bacillus cereus, Pseudomonas aeruginosa and Ralstonia metallidurans were characterized. An example from Pseudomonas fluorescens is given the gene symbol qbsH instead of kynB because of its role in quinolobactin biosynthesis, which begins with tryptophan. All members of this family should be arylformamidase (3.5.1.9).
Probab=22.28 E-value=30 Score=26.17 Aligned_cols=11 Identities=27% Similarity=0.256 Sum_probs=9.1
Q ss_pred eEEEEcCCCCC
Q psy10722 87 SVYHVNAPGQE 97 (106)
Q Consensus 87 ~i~HVdaPGqe 97 (106)
+-=|||||+|=
T Consensus 47 ~GTHiDAP~Hf 57 (206)
T TIGR03035 47 TGAHADAPLHY 57 (206)
T ss_pred cccccccchhh
Confidence 36799999985
No 97
>COG0050 TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis]
Probab=21.80 E-value=39 Score=28.99 Aligned_cols=16 Identities=31% Similarity=0.542 Sum_probs=12.8
Q ss_pred hcCceEEEEcCCCCCC
Q psy10722 83 LENFSVYHVNAPGQEE 98 (106)
Q Consensus 83 ~~~f~i~HVdaPGqe~ 98 (106)
+.+-..-|||+|||.+
T Consensus 72 t~~rhyahVDcPGHaD 87 (394)
T COG0050 72 TANRHYAHVDCPGHAD 87 (394)
T ss_pred cCCceEEeccCCChHH
Confidence 4566778999999975
No 98
>PF14954 LIX1: Limb expression 1
Probab=21.79 E-value=1.1e+02 Score=24.89 Aligned_cols=48 Identities=17% Similarity=0.083 Sum_probs=34.9
Q ss_pred EEEecCCceEEEEEeCCCCCCeEEEeccCCCcchhcccccccchhHHHhh
Q psy10722 34 VYVETDRGSILVAVAGNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSLL 83 (106)
Q Consensus 34 ~~V~T~~G~v~V~v~G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei~ 83 (106)
....-+.|.+-|+-..-...|+.+.|= -|---|||.+|-+||.-.|-.
T Consensus 37 r~a~~~~~~lv~YEs~ps~~ppyVcyV--TLPGGSCFGnfq~C~tkAEAR 84 (252)
T PF14954_consen 37 RGADLKSEALVVYESVPSPSPPYVCYV--TLPGGSCFGNFQNCPTKAEAR 84 (252)
T ss_pred ccccCCCCCeeeeeccCCCCCCeEEEE--eCCCCCccCccccCCcHHHHH
Confidence 344456788888888877778777763 344558999999999877653
No 99
>PF01678 DAP_epimerase: Diaminopimelate epimerase; InterPro: IPR001653 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Two lysine biosynthesis pathways evolved separately in organisms, the diaminopimelic acid (DAP) and aminoadipic acid (AAA) pathways. The DAP pathway synthesizes L-lysine from aspartate and pyruvate, and diaminopimelic acid is an intermediate. This pathway is utilised by most bacteria, some archaea, some fungi, some algae, and plants. The AAA pathway synthesizes L-lysine from alpha-ketoglutarate and acetyl coenzyme A (acetyl-CoA), and alpha-aminoadipic acid is an intermediate. This pathway is utilised by most fungi, some algae, the bacterium Thermus thermophilus, and probably some archaea, such as Sulfolobus, Thermoproteus, and Pyrococcus. No organism is known to possess both pathways []. There four known variations of the DAP pathway in bacteria: the succinylase, acetylase, aminotransferase, and dehydrogenase pathways. These pathways share the steps converting L-aspartate to L-2,3,4,5- tetrahydrodipicolinate (THDPA), but the subsequent steps leading to the production of meso-diaminopimelate, the immediate precursor of L-lysine, are different []. The succinylase pathway acylates THDPA with succinyl-CoA to generate N-succinyl-LL-2-amino-6-ketopimelate and forms meso-DAP by subsequent transamination, desuccinylation, and epimerization. This pathway is utilised by proteobacteria and many firmicutes and actinobacteria. The acetylase pathway is analogous to the succinylase pathway but uses N-acetyl intermediates. This pathway is limited to certain Bacillus species, in which the corresponding genes have not been identified. The aminotransferase pathway converts THDPA directly to LL-DAP by diaminopimelate aminotransferase (DapL) without acylation. This pathway is shared by cyanobacteria, Chlamydia, the archaeon Methanothermobacter thermautotrophicus, and the plant Arabidopsis thaliana. The dehydrogenase pathway forms meso-DAP directly from THDPA, NADPH, and NH4 _ by using diaminopimelate dehydrogenase (Ddh). This pathway is utilised by some Bacillus and Brevibacterium species and Corynebacterium glutamicum. Most bacteria use only one of the four variants, although certain bacteria, such as C. glutamicum and Bacillus macerans, possess both the succinylase and dehydrogenase pathways. This entry represents diaminopimelate epimerase (5.1.1.7 from EC), which catalyses the isomerisation of L,L-dimaminopimelate to meso-DAP in the biosynthetic pathway leading from aspartate to lysine. It is a member of the broader family of PLP-independent amino acid racemases. This enzyme is a monomeric protein of about 30 kDa consisting of two domains which are homologus in structure though they share little sequence similarity []. Each domain consists of mixed beta-sheets which fold into a barrel around the central helix. The active site cleft is formed from both domains and contains two conserved cysteines thought to function as the acid and base in the catalytic reaction []. Other PLP-independent racemases such as glutamate racemase have been shown to share a similar structure and mechanism of catalysis.; GO: 0008837 diaminopimelate epimerase activity, 0009089 lysine biosynthetic process via diaminopimelate; PDB: 2OTN_A 3FVE_A 2Q9J_A 2GKJ_A 1GQZ_A 2Q9H_A 1BWZ_A 2GKE_A 3EKM_C 3EJX_D ....
Probab=21.77 E-value=2.2e+02 Score=19.13 Aligned_cols=23 Identities=35% Similarity=0.398 Sum_probs=20.3
Q ss_pred ceeEEEecCCceEEEEEeCCCCC
Q psy10722 31 VEEVYVETDRGSILVAVAGNRGK 53 (106)
Q Consensus 31 ~qe~~V~T~~G~v~V~v~G~~~k 53 (106)
.++..|.|+-|.+.|.+..+.++
T Consensus 88 ~~~v~v~t~gG~l~v~~~~~~~~ 110 (121)
T PF01678_consen 88 KDEVTVETPGGILRVEVDEDGNN 110 (121)
T ss_dssp SSEEEEEETTEEEEEEEETTSSS
T ss_pred ceEEEEEeCCcEEEEEEEcCCCE
Confidence 47899999999999999987765
No 100
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=21.45 E-value=1.4e+02 Score=19.79 Aligned_cols=43 Identities=26% Similarity=0.463 Sum_probs=28.5
Q ss_pred CC-CCeEEEeccCCCcchhcc--c-ccccchhHHHh-hcCceEEEEcCCC
Q psy10722 51 RG-KPAILTYHDLGLNYISNF--Q-AFFNFSDMRSL-LENFSVYHVNAPG 95 (106)
Q Consensus 51 ~~-kPailTyHDvGlNh~scF--~-~ff~~~~m~ei-~~~f~i~HVdaPG 95 (106)
.+ ||++|.|+.-.+-+ |- . .+++.+..++. .++|.++-||+..
T Consensus 12 ~~~k~vlv~f~a~wC~~--C~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~ 59 (125)
T cd02951 12 DGKKPLLLLFSQPGCPY--CDKLKRDYLNDPAVQAYIRAHFVVVYINIDG 59 (125)
T ss_pred cCCCcEEEEEeCCCCHH--HHHHHHHhcCcHHHHHHHHhheEEEEEEccC
Confidence 45 89999998766654 53 2 24444555444 4678899998764
No 101
>COG0692 Ung Uracil DNA glycosylase [DNA replication, recombination, and repair]
Probab=21.13 E-value=70 Score=25.71 Aligned_cols=28 Identities=25% Similarity=0.349 Sum_probs=24.8
Q ss_pred cCCceEEEEEeC-CCCCCeEEEeccCCCcchhcccc
Q psy10722 38 TDRGSILVAVAG-NRGKPAILTYHDLGLNYISNFQA 72 (106)
Q Consensus 38 T~~G~v~V~v~G-~~~kPailTyHDvGlNh~scF~~ 72 (106)
|+...|.|.|-| |+ ||.-|.-|--||+-
T Consensus 51 tp~~~vKVVIlGQDP-------Yh~p~qAhGLsFSV 79 (223)
T COG0692 51 TPFDDVKVVILGQDP-------YHGPGQAHGLSFSV 79 (223)
T ss_pred CChhheEEEEEecCC-------CCCCCccceeeeec
Confidence 788999999999 76 99999999999974
No 102
>PF02575 YbaB_DNA_bd: YbaB/EbfC DNA-binding family; InterPro: IPR004401 The function of this protein is unknown. It is restricted to bacteria and a few plants, such as Arabidopsis. The plant form contains an additional N-terminal region that may serve as a transit peptide and shows a close relationship to the cyanobacterial member, suggesting that it is a chloroplast protein. Members of this family are found in a single copy per bacterial genome, but are broadly distributed. A crystal structure of one member, YbaB from Haemophilus influenzae, revealed a core structure consisting of two layers, alpha/beta; YbaB forms a tight dimer with a 3-layer structure, beta/alpha/beta []. YbaB is co-transcribed with RecR, which appears to protect DNA strands of the replilcation fork when it is blocked by DNA damage. A deletion of the YbaB operon resulted in increased sensitivity to DNA-damaging agents compared with the wild-type strain.; PDB: 1PUG_B 3F42_B 1YBX_B 1J8B_A.
Probab=21.09 E-value=1.3e+02 Score=19.49 Aligned_cols=21 Identities=33% Similarity=0.355 Sum_probs=16.0
Q ss_pred eeEEEecCCceEEEEEeCCCC
Q psy10722 32 EEVYVETDRGSILVAVAGNRG 52 (106)
Q Consensus 32 qe~~V~T~~G~v~V~v~G~~~ 52 (106)
.+.....+.|.|+|+|-|+..
T Consensus 21 ~~~~~~s~~g~V~V~v~g~g~ 41 (93)
T PF02575_consen 21 IEVTGTSGDGLVTVTVNGNGE 41 (93)
T ss_dssp SEEEEEETCCTEEEEEETTS-
T ss_pred CEEEEEECCCEEEEEEecCce
Confidence 455667778999999999753
No 103
>KOG0325|consensus
Probab=20.72 E-value=37 Score=27.31 Aligned_cols=19 Identities=42% Similarity=0.871 Sum_probs=14.4
Q ss_pred EEeccCCCcchhcccccccc
Q psy10722 57 LTYHDLGLNYISNFQAFFNF 76 (106)
Q Consensus 57 lTyHDvGlNh~scF~~ff~~ 76 (106)
+|||.++||.-+-. .+||+
T Consensus 155 IT~HGlaLN~~tDL-~~fnh 173 (226)
T KOG0325|consen 155 ITYHGLALNVNTDL-TYFNH 173 (226)
T ss_pred EeecceEEEeccCc-chhhc
Confidence 89999999996654 34554
No 104
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.70 E-value=2e+02 Score=22.10 Aligned_cols=57 Identities=21% Similarity=0.343 Sum_probs=34.6
Q ss_pred eeEEEecCCceEEEEEe---CCCCCCeEEEeccCCCcchhcccccccchh-HHHh-hcCceEEEEcCCC
Q psy10722 32 EEVYVETDRGSILVAVA---GNRGKPAILTYHDLGLNYISNFQAFFNFSD-MRSL-LENFSVYHVNAPG 95 (106)
Q Consensus 32 qe~~V~T~~G~v~V~v~---G~~~kPailTyHDvGlNh~scF~~ff~~~~-m~ei-~~~f~i~HVdaPG 95 (106)
++..+.++.+.+.-++. |....|++|-+||+.=.+ . +..+ .+.| .+.+.++=.|-=+
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~-~------~i~~~a~rlA~~Gy~v~~Pdl~~ 64 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLN-P------HIRDVARRLAKAGYVVLAPDLYG 64 (236)
T ss_pred cceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCc-h------HHHHHHHHHHhCCcEEEechhhc
Confidence 45677777766655544 455669999999984443 1 1222 2444 6677777666433
No 105
>PRK10115 protease 2; Provisional
Probab=20.54 E-value=5.6e+02 Score=23.01 Aligned_cols=65 Identities=20% Similarity=0.227 Sum_probs=41.8
Q ss_pred CceeEEEecCCc-eEEE-EEe-----CCCCCCeEEEeccCCCcchhcccccccchhHHHh-hcCceEEEEcCCCCCC
Q psy10722 30 TVEEVYVETDRG-SILV-AVA-----GNRGKPAILTYHDLGLNYISNFQAFFNFSDMRSL-LENFSVYHVNAPGQEE 98 (106)
Q Consensus 30 ~~qe~~V~T~~G-~v~V-~v~-----G~~~kPailTyHDvGlNh~scF~~ff~~~~m~ei-~~~f~i~HVdaPGqe~ 98 (106)
..++..+.+..| .|.+ .++ ++.++|.||..|. |-. .++.+-|+ +.++.+ .+.+++.-++.-|.-+
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hG-g~~--~~~~p~f~-~~~~~l~~rG~~v~~~n~RGs~g 487 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYG-SYG--ASIDADFS-FSRLSLLDRGFVYAIVHVRGGGE 487 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEC-CCC--CCCCCCcc-HHHHHHHHCCcEEEEEEcCCCCc
Confidence 335555666667 5665 344 2466799999998 443 45555554 445666 6678888888887643
No 106
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=20.43 E-value=35 Score=21.96 Aligned_cols=44 Identities=30% Similarity=0.478 Sum_probs=26.7
Q ss_pred CCCCeEEEeccCCCcchhcc---cccccchhH-HHhhcCceEEEEcCCCC
Q psy10722 51 RGKPAILTYHDLGLNYISNF---QAFFNFSDM-RSLLENFSVYHVNAPGQ 96 (106)
Q Consensus 51 ~~kPailTyHDvGlNh~scF---~~ff~~~~m-~ei~~~f~i~HVdaPGq 96 (106)
.+||.++.|+|-++-| |- ..++..++. ..+..++.++.++....
T Consensus 4 ~~k~~v~~F~~~~C~~--C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (112)
T PF13098_consen 4 NGKPIVVVFTDPWCPY--CKKLEKELFPDNDVARYLKDDFQVIFVNIDDS 51 (112)
T ss_dssp TSSEEEEEEE-TT-HH--HHHHHHHHHHHHHHHCEEHCECEEEECESHSH
T ss_pred CCCEEEEEEECCCCHH--HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCc
Confidence 5789999999999876 64 222222222 22344789999987643
Done!