BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10725
(160 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328715292|ref|XP_001943367.2| PREDICTED: glycine receptor subunit beta-type 4-like
[Acyrthosiphon pisum]
Length = 343
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/76 (84%), Positives = 71/76 (93%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DYEVDLYLRQKWQD RL+H IT++LDLNDPNLVKAIWKPEVYFPNAKHAEFQ+VTVPNV
Sbjct: 2 DYEVDLYLRQKWQDARLQHKDITESLDLNDPNLVKAIWKPEVYFPNAKHAEFQFVTVPNV 61
Query: 82 LVRINPDGEILYMLSI 97
L+RI PDG+ILYML +
Sbjct: 62 LIRIKPDGDILYMLRL 77
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 52/57 (91%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ K ++LDLNDPNLVKAIWKPEVYFPNAKHAEFQ+VTVPNVL+RI PDG+ILYML
Sbjct: 19 QHKDITESLDLNDPNLVKAIWKPEVYFPNAKHAEFQFVTVPNVLIRIKPDGDILYML 75
>gi|242000092|ref|XP_002434689.1| gamma-aminobutyric acid A recptor, subunit alpha, putative
[Ixodes scapularis]
gi|215498019|gb|EEC07513.1| gamma-aminobutyric acid A recptor, subunit alpha, putative
[Ixodes scapularis]
Length = 362
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 69/82 (84%)
Query: 16 CTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
C ++DYEVDLYLRQ WQD RL ++++ LDLNDP LV+ IWKPEV+F NAKHAEFQY
Sbjct: 3 CDLCLQDYEVDLYLRQTWQDDRLTSSNVSRPLDLNDPKLVQRIWKPEVFFANAKHAEFQY 62
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VTVPNVLVR+NP+G+ILYML +
Sbjct: 63 VTVPNVLVRVNPNGKILYMLRL 84
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 92 LYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRIN 151
LY+ +++ + LDLNDP LV+ IWKPEV+F NAKHAEFQYVTVPNVLVR+N
Sbjct: 14 LYLRQTWQDDRLTSSNVSRPLDLNDPKLVQRIWKPEVFFANAKHAEFQYVTVPNVLVRVN 73
Query: 152 PDGEILYML 160
P+G+ILYML
Sbjct: 74 PNGKILYML 82
>gi|391347839|ref|XP_003748161.1| PREDICTED: glycine receptor subunit alpha-2-like [Metaseiulus
occidentalis]
Length = 422
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
Query: 8 KELVGRSLCT--PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYF 65
E+ RS + P+ DYEVDLYLRQ WQD R K ++ ++ LDLNDP LV+ IWKPEV+F
Sbjct: 80 SEIFIRSFGSIDPSNMDYEVDLYLRQGWQDDRFKKNTFSRALDLNDPKLVQRIWKPEVFF 139
Query: 66 PNAKHAEFQYVTVPNVLVRINPDGEILYMLSI 97
NAKHAEFQ+VTVPNVLVRI P GEILYML +
Sbjct: 140 ANAKHAEFQFVTVPNVLVRIKPSGEILYMLRL 171
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 86 NPDGEI-LYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 144
N D E+ LY+ +++ K+ +ALDLNDP LV+ IWKPEV+F NAKHAEFQ+VTVP
Sbjct: 94 NMDYEVDLYLRQGWQDDRFKKNTFSRALDLNDPKLVQRIWKPEVFFANAKHAEFQFVTVP 153
Query: 145 NVLVRINPDGEILYML 160
NVLVRI P GEILYML
Sbjct: 154 NVLVRIKPSGEILYML 169
>gi|241726702|ref|XP_002413761.1| conserved hypothetical protein [Ixodes scapularis]
gi|215507577|gb|EEC17069.1| conserved hypothetical protein [Ixodes scapularis]
Length = 74
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 64/74 (86%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DYE DLYLRQ W D+RL+ ++++ LDLNDP LV+ IWKPEV+F NAKHAEFQYVTVPNV
Sbjct: 1 DYEGDLYLRQAWIDERLRKSTLSRPLDLNDPKLVQMIWKPEVFFANAKHAEFQYVTVPNV 60
Query: 82 LVRINPDGEILYML 95
LVRINP GEILYML
Sbjct: 61 LVRINPSGEILYML 74
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 48/57 (84%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++ + LDLNDP LV+ IWKPEV+F NAKHAEFQYVTVPNVLVRINP GEILYML
Sbjct: 18 RKSTLSRPLDLNDPKLVQMIWKPEVFFANAKHAEFQYVTVPNVLVRINPSGEILYML 74
>gi|241173542|ref|XP_002410862.1| conserved hypothetical protein [Ixodes scapularis]
gi|215495026|gb|EEC04667.1| conserved hypothetical protein [Ixodes scapularis]
Length = 75
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DYEVDLYLRQ+W D R + IT LDLNDP LV+ IWKPEV+F NAKHAEFQYVTVPNV
Sbjct: 2 DYEVDLYLRQRWHDDRFEQSGITGPLDLNDPKLVQRIWKPEVFFANAKHAEFQYVTVPNV 61
Query: 82 LVRINPDGEILYML 95
LVRI+P G+ILYML
Sbjct: 62 LVRISPSGDILYML 75
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%)
Query: 92 LYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRIN 151
LY+ ++ ++ LDLNDP LV+ IWKPEV+F NAKHAEFQYVTVPNVLVRI+
Sbjct: 7 LYLRQRWHDDRFEQSGITGPLDLNDPKLVQRIWKPEVFFANAKHAEFQYVTVPNVLVRIS 66
Query: 152 PDGEILYML 160
P G+ILYML
Sbjct: 67 PSGDILYML 75
>gi|391328876|ref|XP_003738909.1| PREDICTED: glycine receptor subunit alpha-2-like [Metaseiulus
occidentalis]
Length = 369
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 64/76 (84%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DYEVDLYLRQ+W D RL + +I+ LDLNDP LV+ IWKPEV+F NAKHAEFQ+VTVPNV
Sbjct: 29 DYEVDLYLRQRWFDGRLANVNISAPLDLNDPKLVQKIWKPEVFFANAKHAEFQFVTVPNV 88
Query: 82 LVRINPDGEILYMLSI 97
LVR++P G ILYML +
Sbjct: 89 LVRLSPHGMILYMLRL 104
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 44/49 (89%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
LDLNDP LV+ IWKPEV+F NAKHAEFQ+VTVPNVLVR++P G ILYML
Sbjct: 54 LDLNDPKLVQKIWKPEVFFANAKHAEFQFVTVPNVLVRLSPHGMILYML 102
>gi|391330514|ref|XP_003739705.1| PREDICTED: glycine receptor subunit alpha-3-like [Metaseiulus
occidentalis]
Length = 439
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-------TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQ 74
DY+V+LYLR+ W D R + LDLND ++KAIWKP++YFPNAK +F
Sbjct: 102 DYDVELYLRESWDDIRFTSLQFGAGTNNDSSRLDLNDATIIKAIWKPDIYFPNAKEGKFP 161
Query: 75 YVTVPNVLVRINPDGEILYMLSI 97
+ VPNVL+RI +G +LY L +
Sbjct: 162 FCHVPNVLLRIEANGRVLYSLRL 184
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
LDLND ++KAIWKP++YFPNAK +F + VPNVL+RI +G +LY L
Sbjct: 134 LDLNDATIIKAIWKPDIYFPNAKEGKFPFCHVPNVLLRIEANGRVLYSL 182
>gi|241121565|ref|XP_002403250.1| glycine receptor alpha 1 variant, putative [Ixodes scapularis]
gi|215493391|gb|EEC03032.1| glycine receptor alpha 1 variant, putative [Ixodes scapularis]
Length = 254
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRL--KHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+Y +D+YLRQ W+D+RL H ++ T+ +N +++ IWKP+++F N K A+F +VTVP
Sbjct: 1 EYGMDIYLRQSWRDRRLNLSQHGVSSTVTINGEDIMSKIWKPDLFFRNVKDAKFHHVTVP 60
Query: 80 NVLVRINPDGEILYMLSI 97
N LV+I PDGE+L+ + +
Sbjct: 61 NKLVKIGPDGEVLFSMRL 78
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ +N +++ IWKP+++F N K A+F +VTVPN LV+I PDGE+L+ +
Sbjct: 26 STVTINGEDIMSKIWKPDLFFRNVKDAKFHHVTVPNKLVKIGPDGEVLFSM 76
>gi|391329184|ref|XP_003739056.1| PREDICTED: glycine receptor subunit alpha-3-like [Metaseiulus
occidentalis]
Length = 490
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLK--HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+Y +D+YLRQ W D+RL I T+ LN +L++ IWKP+++F N K A F VTVP
Sbjct: 152 EYGMDIYLRQSWTDKRLNLSRFGINYTVTLNGEDLMEKIWKPDLFFRNVKRAAFHRVTVP 211
Query: 80 NVLVRINPDGEILYMLSI 97
N+LVRI PDGE+LY + +
Sbjct: 212 NMLVRIAPDGEVLYSMRL 229
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
LN +L++ IWKP+++F N K A F VTVPN+LVRI PDGE+LY +
Sbjct: 181 LNGEDLMEKIWKPDLFFRNVKRAAFHRVTVPNMLVRIAPDGEVLYSM 227
>gi|427787619|gb|JAA59261.1| Putative glycine receptor alpha 3 [Rhipicephalus pulchellus]
Length = 469
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRL--KHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+Y +D+YLRQ WQD RL + + T+ +N +++ IWKP+++F N K A F YVTVP
Sbjct: 134 EYGMDIYLRQSWQDLRLNVSKYGVNSTVTINGEDIMGKIWKPDLFFRNVKEASFHYVTVP 193
Query: 80 NVLVRINPDGEILYMLSI 97
N LV++ PDGE+L+ + +
Sbjct: 194 NKLVKLGPDGEVLFSMRL 211
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ +N +++ IWKP+++F N K A F YVTVPN LV++ PDGE+L+ +
Sbjct: 159 STVTINGEDIMGKIWKPDLFFRNVKEASFHYVTVPNKLVKLGPDGEVLFSM 209
>gi|427778935|gb|JAA54919.1| Putative gaba receptor [Rhipicephalus pulchellus]
Length = 524
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLK--HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+Y +D+YLRQ WQD RL + + T+ +N +++ IWKP+++F N K A F YVTVP
Sbjct: 156 EYGMDIYLRQSWQDLRLNVSKYGVNSTVTINGEDIMGKIWKPDLFFRNVKEASFHYVTVP 215
Query: 80 NVLVRINPDGEILYMLSI 97
N LV++ PDGE+L+ + +
Sbjct: 216 NKLVKLGPDGEVLFSMRL 233
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+N +++ IWKP+++F N K A F YVTVPN LV++ PDGE+L+ +
Sbjct: 185 INGEDIMGKIWKPDLFFRNVKEASFHYVTVPNKLVKLGPDGEVLFSM 231
>gi|170048762|ref|XP_001870768.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870754|gb|EDS34137.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 515
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL H K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 254 DYSMDCYFRQYWRDKRLSFHGPIKSLSLS-IKMLERIWRPDTYFYNGKHSHVHTITVPNK 312
Query: 82 LVRINPDGEILYMLSI 97
L+R++ DGEILY + +
Sbjct: 313 LLRLSQDGEILYSMRL 328
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+R++ DGEILY +
Sbjct: 285 MLERIWRPDTYFYNGKHSHVHTITVPNKLLRLSQDGEILYSM 326
>gi|390464138|ref|XP_002749099.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Callithrix jacchus]
Length = 455
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 16 CTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
CT +Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE +
Sbjct: 75 CTCEHREYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWLPDTIFRNSKTAEAHW 133
Query: 76 VTVPNVLVRINPDGEILYMLSIIEN 100
+T PN L+RI DG+ILY L + N
Sbjct: 134 ITTPNQLLRIWNDGKILYTLRLTIN 158
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 104 KILTLNS-NMVGLIWLPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 153
>gi|350578853|ref|XP_003353474.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Sus scrofa]
Length = 416
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 17 TPAIE-DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
+P +E +Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE +
Sbjct: 13 SPLLESEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHW 71
Query: 76 VTVPNVLVRINPDGEILYMLSIIE 99
+T PN L+RI DG+ILY LS+ E
Sbjct: 72 ITTPNQLLRIWNDGKILYTLSLEE 95
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 42 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 91
>gi|355777890|gb|EHH62926.1| GABA(A) receptor subunit gamma-3, partial [Macaca fascicularis]
Length = 424
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P I +Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T
Sbjct: 46 PDIGEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWIT 104
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG+ILY L + N
Sbjct: 105 TPNQLLRIWNDGKILYTLRLTIN 127
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 84 RINPD-GEILYMLSIIENNTNKR---KQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQ 139
++ PD GE + + T+ R K L LN N+V IW P+ F N+K AE
Sbjct: 43 KLRPDIGEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAH 101
Query: 140 YVTVPNVLVRINPDGEILYML 160
++T PN L+RI DG+ILY L
Sbjct: 102 WITTPNQLLRIWNDGKILYTL 122
>gi|115532183|ref|NP_001024473.2| Protein GGR-2, isoform b [Caenorhabditis elegans]
gi|351049759|emb|CCD63813.1| Protein GGR-2, isoform b [Caenorhabditis elegans]
Length = 513
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S D+++D+Y +Q W+D RL H+ + L + D ++ +WKP+VYF NA+ A
Sbjct: 66 GMSSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVL-VKDKAVLHKMWKPDVYFANARIA 124
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
EF VT PN LV I PDG ILY
Sbjct: 125 EFHEVTQPNFLVWIQPDGSILY 146
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 107 QKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ R+ L + D ++ +WKP+VYF NA+ AEF VT PN LV I PDG ILY
Sbjct: 96 ETRRVL-VKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILY 146
>gi|115532178|ref|NP_001024472.2| Protein GGR-2, isoform a [Caenorhabditis elegans]
gi|351049758|emb|CCD63812.1| Protein GGR-2, isoform a [Caenorhabditis elegans]
Length = 546
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S D+++D+Y +Q W+D RL H+ + L + D ++ +WKP+VYF NA+ A
Sbjct: 66 GMSSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVL-VKDKAVLHKMWKPDVYFANARIA 124
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
EF VT PN LV I PDG ILY
Sbjct: 125 EFHEVTQPNFLVWIQPDGSILY 146
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 107 QKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ R+ L + D ++ +WKP+VYF NA+ AEF VT PN LV I PDG ILY
Sbjct: 96 ETRRVL-VKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILY 146
>gi|327279422|ref|XP_003224455.1| PREDICTED: glycine receptor subunit alpha-1-like [Anolis
carolinensis]
Length = 548
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ W D RL +H LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 184 DYRVNIFLRQTWNDPRLAYHEFPDDALDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 242
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 243 KLLRISKNGNVLYSIRI 259
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
ALDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 209 ALDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISKNGNVLYSI 257
>gi|51122|emb|CAA41988.1| gamma subunit of GABA-alpha receptor [Mus musculus]
Length = 467
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S KTL LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKTLTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KTLTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|347963040|ref|XP_001237369.2| AGAP000039-PA [Anopheles gambiae str. PEST]
gi|333467388|gb|EAU77351.2| AGAP000039-PA [Anopheles gambiae str. PEST]
Length = 464
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 51 DYSMDCYFRQYWRDKRLSFRGPIKSLSLS-IKMLERIWRPDTYFYNGKHSHVHTITVPNK 109
Query: 82 LVRINPDGEILYMLSI 97
L+R++ DGEILY + +
Sbjct: 110 LLRLSQDGEILYSMRL 125
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ +++ IW+P+ YF N KH+ +TVPN L+R++ DGEILY +
Sbjct: 74 KSLSLS-IKMLERIWRPDTYFYNGKHSHVHTITVPNKLLRLSQDGEILYSM 123
>gi|351699522|gb|EHB02441.1| Gamma-aminobutyric acid receptor subunit gamma-3 [Heterocephalus
glaber]
Length = 361
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 20 IEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+++Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T P
Sbjct: 4 VQEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTP 62
Query: 80 NVLVRINPDGEILYMLSIIEN 100
N L+RI DG+ILY L + N
Sbjct: 63 NQLLRIWNDGKILYTLRLTIN 83
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 29 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 78
>gi|307200308|gb|EFN80573.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Harpegnathos
saltator]
Length = 468
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 148 DYSMDCYFRQSWRDSRLSFLGPIKSLSLSI-KMLERIWRPDTYFYNGKHSYVHTITVPNK 206
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 207 LLRISQDGDILYSMRL 222
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ +++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 171 KSLSLSI-KMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 220
>gi|118150504|ref|NP_001071290.1| cys-loop ligand-gated ion channel subunit 8916 [Apis mellifera]
gi|110555530|gb|ABG75745.1| cys-loop ligand-gated ion channel subunit [Apis mellifera]
Length = 510
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 82 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 140
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 141 LLRISQDGDILYSMRL 156
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 113 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
>gi|410048901|ref|XP_003952664.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like,
partial [Pan troglodytes]
Length = 172
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 20 IEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
++Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T P
Sbjct: 10 FQEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTP 68
Query: 80 NVLVRINPDGEILYMLSIIEN 100
N L+RI DG+ILY L + N
Sbjct: 69 NQLLRIWNDGKILYTLRLTIN 89
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 35 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 84
>gi|348552638|ref|XP_003462134.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Cavia porcellus]
Length = 630
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 254 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 312
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 313 LLRIWNDGKILYTLRLTIN 331
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 277 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 326
>gi|260812497|ref|XP_002600957.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
gi|229286247|gb|EEN56969.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
Length = 428
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V+++LRQ+W D RLK ++L L D +L++ IW P+++F N K A F VT N
Sbjct: 81 DYRVNIFLRQRWNDPRLKFMDYNESLSL-DTSLLRKIWVPDLFFANEKGANFHAVTTENK 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
L+RI+P G+ILY + + + +R +D N+
Sbjct: 140 LLRISPAGDILYSIRLTLTLACPMRLQRFPMDRQQCNM 177
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D +L++ IW P+++F N K A F VT N L+RI+P G+ILY
Sbjct: 109 DTSLLRKIWVPDLFFANEKGANFHAVTTENKLLRISPAGDILY 151
>gi|195131085|ref|XP_002009981.1| GI14943 [Drosophila mojavensis]
gi|193908431|gb|EDW07298.1| GI14943 [Drosophila mojavensis]
Length = 592
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH+ +TVPN
Sbjct: 147 DYSMDCYFRQYWRDKRLSFQGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNK 205
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
L+R++ DG ILY + + T + K +D
Sbjct: 206 LLRLDQDGGILYSMRLTIKATCPMELKNFPMD 237
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH+ +TVPN L+R++ DG ILY +
Sbjct: 170 KSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGILYSM 219
>gi|241155307|ref|XP_002407499.1| neurotransmitter gated ion channel, putative [Ixodes scapularis]
gi|215494125|gb|EEC03766.1| neurotransmitter gated ion channel, putative [Ixodes scapularis]
Length = 280
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 20 IEDYEVDLYLRQKWQDQRL--KHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
DY++D+YLR W+D RL + I +TL LN +L+ +WKP+++F NAK VT
Sbjct: 54 FADYDMDMYLRLAWKDPRLSMRRFGINRTLTLNGQHLLSRMWKPDLFFVNAKEVRTHSVT 113
Query: 78 VPNVLVRINPDGEIL 92
+PN L++++PDG+IL
Sbjct: 114 IPNELLQLSPDGDIL 128
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
+R + L LN +L+ +WKP+++F NAK VT+PN L++++PDG+IL
Sbjct: 75 RRFGINRTLTLNGQHLLSRMWKPDLFFVNAKEVRTHSVTIPNELLQLSPDGDIL 128
>gi|383863328|ref|XP_003707133.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 535
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 108 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 166
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 167 LLRISQDGDILYSMRL 182
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 139 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 180
>gi|340727211|ref|XP_003401942.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 520
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 93 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 151
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 152 LLRISQDGDILYSMRL 167
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 124 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 165
>gi|109080436|ref|XP_001115799.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Macaca mulatta]
Length = 449
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 20 IEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
++Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T P
Sbjct: 71 FQEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTP 129
Query: 80 NVLVRINPDGEILYMLSIIEN 100
N L+RI DG+ILY L + N
Sbjct: 130 NQLLRIWNDGKILYTLRLTIN 150
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 96 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 145
>gi|307189539|gb|EFN73916.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Camponotus
floridanus]
Length = 505
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 66 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 124
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 125 LLRISQDGDILYSMRL 140
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 97 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 138
>gi|355692547|gb|EHH27150.1| GABA(A) receptor subunit gamma-3, partial [Macaca mulatta]
Length = 388
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 20 IEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
++Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T P
Sbjct: 10 FQEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTP 68
Query: 80 NVLVRINPDGEILYMLSIIEN 100
N L+RI DG+ILY L + N
Sbjct: 69 NQLLRIWNDGKILYTLRLTIN 89
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 35 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 84
>gi|126342458|ref|XP_001376848.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Monodelphis domestica]
Length = 562
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 189 EYTIDIFFAQSWYDRRLRFNSTLKALTLNS-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 247
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 248 LLRIWNDGKVLYTLRL 263
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
KAL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 212 KALTLNS-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 261
>gi|380023906|ref|XP_003695750.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Apis florea]
Length = 303
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 82 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 140
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 141 LLRISQDGDILYSMRL 156
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ +++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 105 KSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
>gi|345324534|ref|XP_003430829.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Ornithorhynchus anatinus]
Length = 602
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 208 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 266
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 267 LLRIWNDGKILYTLRLTIN 285
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 231 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 280
>gi|322782659|gb|EFZ10522.1| hypothetical protein SINV_01657 [Solenopsis invicta]
Length = 569
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 117 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 175
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 176 LLRISQDGDILYSMRL 191
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 148 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 189
>gi|341887122|gb|EGT43057.1| CBN-GGR-2 protein [Caenorhabditis brenneri]
Length = 534
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S D+++D+Y +Q W+D RL H+ + L + D ++ +W P+VYF NA+ A
Sbjct: 63 GMSSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVL-VKDKAVLHKMWHPDVYFANARIA 121
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
EF VT PN LV I PDG ILY
Sbjct: 122 EFHEVTQPNFLVWIQPDGSILY 143
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 107 QKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ R+ L + D ++ +W P+VYF NA+ AEF VT PN LV I PDG ILY
Sbjct: 93 ETRRVL-VKDKAVLHKMWHPDVYFANARIAEFHEVTQPNFLVWIQPDGSILY 143
>gi|268579645|ref|XP_002644805.1| C. briggsae CBR-GGR-2 protein [Caenorhabditis briggsae]
Length = 499
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S D+++D+Y +Q W+D RL H+ + L + D ++ +W P+VYF NA+ A
Sbjct: 14 GMSSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVL-VKDKAVLHKMWHPDVYFANARIA 72
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
EF VT PN LV I PDG ILY
Sbjct: 73 EFHEVTQPNFLVWIQPDGSILY 94
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 107 QKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ R+ L + D ++ +W P+VYF NA+ AEF VT PN LV I PDG ILY
Sbjct: 44 ETRRVL-VKDKAVLHKMWHPDVYFANARIAEFHEVTQPNFLVWIQPDGSILY 94
>gi|308511531|ref|XP_003117948.1| CRE-GGR-2 protein [Caenorhabditis remanei]
gi|308238594|gb|EFO82546.1| CRE-GGR-2 protein [Caenorhabditis remanei]
Length = 535
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S D+++D+Y +Q W+D RL H+ + L + D ++ +W P+VYF NA+ A
Sbjct: 63 GMSSFRTQTMDFQLDVYFQQFWRDPRLAHNETRRVL-VKDKAVLHKMWHPDVYFANARIA 121
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
EF VT PN LV I PDG ILY
Sbjct: 122 EFHEVTQPNFLVWIQPDGSILY 143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 107 QKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ R+ L + D ++ +W P+VYF NA+ AEF VT PN LV I PDG ILY
Sbjct: 93 ETRRVL-VKDKAVLHKMWHPDVYFANARIAEFHEVTQPNFLVWIQPDGSILY 143
>gi|426378401|ref|XP_004055915.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like,
partial [Gorilla gorilla gorilla]
Length = 154
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 1 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 59
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 60 LLRIWNDGKILYTLRLTIN 78
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 24 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 73
>gi|195392958|ref|XP_002055121.1| GJ18972 [Drosophila virilis]
gi|194149631|gb|EDW65322.1| GJ18972 [Drosophila virilis]
Length = 534
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH+ +TVPN
Sbjct: 112 DYSMDCYFRQYWRDKRLSFQGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNK 170
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
L+R++ DG ILY + + T + K +D
Sbjct: 171 LLRLDQDGGILYSMRLTIKATCPMELKNFPMD 202
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++ IW+P+ YF N KH+ +TVPN L+R++ DG ILY +
Sbjct: 143 MLDKIWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGILYSM 184
>gi|195457044|ref|XP_002075401.1| GK17720 [Drosophila willistoni]
gi|194171486|gb|EDW86387.1| GK17720 [Drosophila willistoni]
Length = 562
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH+ +TVPN
Sbjct: 107 DYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNK 165
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNLV 120
L+R++ DG ILY + + T + K +D LV
Sbjct: 166 LLRLDQDGGILYSMRLTIKATCPMELKNFPMDRQSCPLV 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH+ +TVPN L+R++ DG ILY +
Sbjct: 130 KSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGILYSM 179
>gi|350423054|ref|XP_003493370.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 535
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 107 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 165
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 166 LLRISQDGDILYSMRL 181
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 138 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 179
>gi|334311152|ref|XP_001379288.2| PREDICTED: glycine receptor subunit alpha-1-like [Monodelphis
domestica]
Length = 532
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITK-TLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 168 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 226
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 227 KLLRISRNGNVLYSIRI 243
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 193 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 241
>gi|195044262|ref|XP_001991786.1| GH12851 [Drosophila grimshawi]
gi|193901544|gb|EDW00411.1| GH12851 [Drosophila grimshawi]
Length = 552
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH+ +TVPN
Sbjct: 108 DYSMDCYFRQYWRDKRLSFQGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNK 166
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
L+R++ DG ILY + + T + K +D
Sbjct: 167 LLRLDQDGGILYSMRLTIKATCPMELKNFPMD 198
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++ IW+P+ YF N KH+ +TVPN L+R++ DG ILY +
Sbjct: 139 MLDKIWRPDTYFYNGKHSHIHTITVPNKLLRLDQDGGILYSM 180
>gi|395546001|ref|XP_003774883.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Sarcophilus harrisii]
Length = 597
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 92 EYTIDIFFAQSWYDRRLRFNSTLKGLTLNS-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 150
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 151 LLRIWNDGKVLYTLRL 166
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 115 KGLTLNS-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 164
>gi|410920938|ref|XP_003973940.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Takifugu rubripes]
Length = 410
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 5 AAQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVY 64
A K+ GR+L E+Y++D+ Q W D RL+++S K L LN N+V IW P+
Sbjct: 14 ALHKKGQGRTLLLEP-EEYQIDIIFAQTWTDSRLRYNSTMKLLTLNS-NMVGLIWLPDTI 71
Query: 65 FPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIEN 100
F N+K A+ ++T+PN L+RI DG+ILY L + N
Sbjct: 72 FRNSKTADSHWITMPNQLLRIWNDGKILYTLRLTIN 107
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K A+ ++T+PN L+RI DG+ILY L
Sbjct: 53 KLLTLNS-NMVGLIWLPDTIFRNSKTADSHWITMPNQLLRIWNDGKILYTL 102
>gi|332026034|gb|EGI66185.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Acromyrmex
echinatior]
Length = 429
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 94 DYSMDCYFRQSWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 152
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 153 LLRISQDGDILYSMRL 168
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ +++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 117 KSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 166
>gi|270006459|gb|EFA02907.1| cys-loop ligand-gated ion channel subunit [Tribolium castaneum]
Length = 538
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D Y RQ W+DQRL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 116 EYSMDCYFRQYWRDQRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 174
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 175 LLRISQDGDILYSMRL 190
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 147 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 188
>gi|158262729|ref|NP_001103425.1| cys-loop ligand-gated ion channel subunit precursor [Tribolium
castaneum]
gi|156447625|gb|ABU63605.1| cys-loop ligand-gated ion channel subunit [Tribolium castaneum]
Length = 549
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D Y RQ W+DQRL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 116 EYSMDCYFRQYWRDQRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 174
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG+ILY + +
Sbjct: 175 LLRISQDGDILYSMRL 190
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ DG+ILY +
Sbjct: 147 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 188
>gi|432098881|gb|ELK28376.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Myotis davidii]
Length = 497
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
E+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 139 EEYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPN 197
Query: 81 VLVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 198 RMLRIWNDGRVLYTLRL 214
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 163 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 212
>gi|380806509|gb|AFE75130.1| gamma-aminobutyric acid receptor subunit gamma-3 precursor, partial
[Macaca mulatta]
Length = 212
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 8 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 66
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 67 LLRIWNDGKILYTLRLTIN 85
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 31 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 80
>gi|260822687|ref|XP_002606733.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
gi|229292077|gb|EEN62743.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
Length = 466
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + + LRQ W+DQRL + + ++L L D LV+A+W P+ + N+K A VTV N
Sbjct: 87 DYTITILLRQFWKDQRLAYRGMNRSLSL-DGRLVEALWVPDTFLLNSKEAFLHRVTVDNR 145
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
L+R+ PDGE++Y + I K ++ LD
Sbjct: 146 LIRLFPDGELIYGMRITSVLACKMDLRKYPLD 177
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++L L D LV+A+W P+ + N+K A VTV N L+R+ PDGE++Y +
Sbjct: 110 RSLSL-DGRLVEALWVPDTFLLNSKEAFLHRVTVDNRLIRLFPDGELIYGM 159
>gi|71981619|ref|NP_496306.2| Protein GGR-1 [Caenorhabditis elegans]
gi|56757652|sp|Q09453.2|GLRB4_CAEEL RecName: Full=Glycine receptor subunit beta-type 4; Flags:
Precursor
gi|50507463|emb|CAA86760.2| Protein GGR-1 [Caenorhabditis elegans]
Length = 473
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFP 66
Q + G S D++VD+Y ++KW D RL+H++ TK + + DP L +W P++YF
Sbjct: 71 QMYIEGMSSFHAQSMDFQVDIYFQEKWVDHRLQHNN-TKRILVKDPKLFGLLWHPDLYFA 129
Query: 67 NAKHAEFQYVTVPNVLVRINPDGEILY 93
NA+ A F VT PN LV I P+G + Y
Sbjct: 130 NARTASFHDVTQPNFLVWIYPNGTVWY 156
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K + + DP L +W P++YF NA+ A F VT PN LV I P+G + Y
Sbjct: 108 KRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVWY 156
>gi|402873772|ref|XP_003919699.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit gamma-3 [Papio anubis]
Length = 455
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 117 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 175
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 176 LLRIWNDGKILYTLRLTIN 194
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 65 FPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKR---KQKRKALDLNDPNLVK 121
P ++ YV +P + + D E + + T+ R K L LN N+V
Sbjct: 92 LPRSRSGLCVYVYIPVLGETSSLDMEYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVG 150
Query: 122 AIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 151 LIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 189
>gi|395855550|ref|XP_003800218.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Otolemur garnettii]
Length = 380
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 4 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 62
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 63 LLRIWNDGKILYTLRLTIN 81
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 27 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 76
>gi|308510148|ref|XP_003117257.1| CRE-GGR-1 protein [Caenorhabditis remanei]
gi|308242171|gb|EFO86123.1| CRE-GGR-1 protein [Caenorhabditis remanei]
Length = 563
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D++VD+Y ++KW D RL+H++ TK + + DP L +W P++YF NA+ A F VT PN
Sbjct: 176 DFQVDIYFQEKWVDHRLQHNN-TKRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNF 234
Query: 82 LVRINPDGEILY 93
LV I P+G + Y
Sbjct: 235 LVWIYPNGTVWY 246
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K + + DP L +W P++YF NA+ A F VT PN LV I P+G + Y
Sbjct: 198 KRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVWY 246
>gi|194206380|ref|XP_001494295.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Equus caballus]
Length = 562
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 186 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 244
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 245 LLRIWNDGKILYTLRLTIN 263
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 209 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 258
>gi|260831642|ref|XP_002610767.1| hypothetical protein BRAFLDRAFT_91559 [Branchiostoma floridae]
gi|229296136|gb|EEN66777.1| hypothetical protein BRAFLDRAFT_91559 [Branchiostoma floridae]
Length = 428
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 22 DYEVDLYLRQKWQDQRL-----KHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYV 76
DY ++++LRQ W D+RL + + +L L DP+L+K IW P+ +F N K A F YV
Sbjct: 88 DYRLNIFLRQTWTDRRLAFEENEEMGYSDSLSL-DPSLLKKIWVPDTFFTNEKGANFHYV 146
Query: 77 TVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
T N L+R+N GEILY + + K +R +D
Sbjct: 147 TTENKLLRVNSKGEILYSIRLTLTLACPMKLQRFPMD 183
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
DP+L+K IW P+ +F N K A F YVT N L+R+N GEILY
Sbjct: 121 DPSLLKKIWVPDTFFTNEKGANFHYVTTENKLLRVNSKGEILY 163
>gi|403306406|ref|XP_003943727.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Saimiri boliviensis boliviensis]
Length = 467
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWLPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWLPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|432118041|gb|ELK37978.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Myotis davidii]
Length = 484
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 397 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 455
Query: 82 LVRINPDGEILYML 95
L+RI DG+ILY L
Sbjct: 456 LLRIWNDGKILYTL 469
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RL+ ++L LN+ + IW P+ YF N+K + T PN
Sbjct: 88 EYTIDVFFRQSWNDERLQFEGPIRSLSLNN-MMAGKIWTPDTYFHNSKKSVVHNTTTPNK 146
Query: 82 LVRINPDGEILYMLSI 97
L+R+ DG +LY + +
Sbjct: 147 LLRLESDGTLLYTMRL 162
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 420 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 469
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++L LN+ + IW P+ YF N+K + T PN L+R+ DG +LY +
Sbjct: 111 RSLSLNN-MMAGKIWTPDTYFHNSKKSVVHNTTTPNKLLRLESDGTLLYTM 160
>gi|224043002|ref|XP_002197411.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Taeniopygia guttata]
Length = 446
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|117168291|ref|NP_032100.2| gamma-aminobutyric acid receptor subunit gamma-3 precursor [Mus
musculus]
gi|408360111|sp|P27681.2|GBRG3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|148689916|gb|EDL21863.1| mCG141422 [Mus musculus]
gi|151555263|gb|AAI48536.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 3
[synthetic construct]
Length = 467
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|56182|emb|CAA44930.1| GABA-A receptor gamma-3 subunit [Rattus norvegicus]
gi|228277|prf||1802276A GABA receptor A:SUBUNIT=gamma3
Length = 467
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|363728960|ref|XP_001233421.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Gallus
gallus]
Length = 456
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|301604061|ref|XP_002931686.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Xenopus (Silurana) tropicalis]
Length = 360
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|449475199|ref|XP_002189346.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Taeniopygia guttata]
Length = 490
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 125 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 183
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 184 MLRIWNDGRVLYTLRL 199
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 148 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 197
>gi|348520330|ref|XP_003447681.1| PREDICTED: glycine receptor subunit alphaZ1-like [Oreochromis
niloticus]
Length = 504
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 142 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 200
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 201 KLLRISKNGNVLYSIRI 217
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G +LY +
Sbjct: 167 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSI 215
>gi|297487872|ref|XP_002696562.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Bos
taurus]
gi|296475615|tpg|DAA17730.1| TPA: GABAA receptor gamma 3 subunit-like [Bos taurus]
Length = 481
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 119 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 177
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 178 LLRIWNDGKILYTLRLTIN 196
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 142 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 191
>gi|40288195|ref|NP_077346.3| gamma-aminobutyric acid receptor subunit gamma-3 precursor [Rattus
norvegicus]
gi|120790|sp|P28473.1|GBRG3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|204200|gb|AAA41181.1| GABA-alpha receptor gamma-3 subunit [Rattus norvegicus]
gi|149031472|gb|EDL86452.1| gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3 [Rattus
norvegicus]
Length = 467
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|110347416|ref|NP_150092.2| gamma-aminobutyric acid receptor subunit gamma-3 isoform 1
precursor [Homo sapiens]
gi|13959689|sp|Q99928.2|GBRG3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-3;
AltName: Full=GABA(A) receptor subunit gamma-3; Flags:
Precursor
gi|9802370|gb|AAF99698.1| GABAA receptor gamma 3 subunit [Homo sapiens]
gi|119578063|gb|EAW57659.1| gamma-aminobutyric acid (GABA) A receptor, gamma 3, isoform CRA_b
[Homo sapiens]
Length = 467
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|354488287|ref|XP_003506302.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Cricetulus griseus]
Length = 451
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 75 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 133
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 134 LLRIWNDGKILYTLRLTIN 152
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 98 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 147
>gi|410960770|ref|XP_003986960.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Felis
catus]
Length = 475
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 99 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 157
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 158 LLRIWNDGKILYTLRLTIN 176
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 122 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 171
>gi|345797984|ref|XP_545802.3| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Canis
lupus familiaris]
Length = 467
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|47226189|emb|CAG08336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 310 TETTMDYRLNVFLRQKWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 368
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI DG +LY + +
Sbjct: 369 VTTDNKLLRIFQDGSVLYSIRL 390
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY +
Sbjct: 334 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSI 388
>gi|332247355|ref|XP_003272823.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Nomascus leucogenys]
Length = 467
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|7530452|gb|AAF63215.1| GABAA receptor gamma 3 subunit [Homo sapiens]
Length = 449
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 73 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 131
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 132 LLRIWNDGKILYTLRLTIN 150
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 96 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 145
>gi|1754749|gb|AAB39369.1| GABAA receptor gamma 3 subunit [Homo sapiens]
Length = 467
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|355750396|gb|EHH54734.1| hypothetical protein EGM_15626 [Macaca fascicularis]
Length = 515
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|397515767|ref|XP_003828115.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Pan
paniscus]
Length = 475
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 99 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 157
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 158 LLRIWNDGKILYTLRLTIN 176
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 122 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 171
>gi|426248632|ref|XP_004018064.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Ovis
aries]
Length = 475
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 99 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 157
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 158 LLRIWNDGKILYTLRLTIN 176
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 122 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 171
>gi|268532208|ref|XP_002631232.1| C. briggsae CBR-GGR-1 protein [Caenorhabditis briggsae]
Length = 388
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D++VD+Y ++KW D RL+H++ TK + + DP L +W P++YF NA+ A F VT PN
Sbjct: 1 DFQVDIYFQEKWIDHRLEHNN-TKRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNF 59
Query: 82 LVRINPDGEILY 93
LV I P+G + Y
Sbjct: 60 LVWIYPNGTVWY 71
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 98 IENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
+E+N KR + + DP L +W P++YF NA+ A F VT PN LV I P+G +
Sbjct: 17 LEHNNTKR------ILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVW 70
Query: 158 Y 158
Y
Sbjct: 71 Y 71
>gi|344298013|ref|XP_003420689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Loxodonta africana]
Length = 466
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 90 EYQIDIFFAQTWTDTRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 148
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 149 LLRIWNDGKILYTLRLTIN 167
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 113 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 162
>gi|126337124|ref|XP_001362811.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Monodelphis domestica]
Length = 466
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|194676758|ref|XP_001789268.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Bos
taurus]
Length = 495
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 119 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 177
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 178 LLRIWNDGKILYTLRLTIN 196
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 142 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 191
>gi|268833702|ref|NP_001161371.1| glycine receptor subunit alpha-2 precursor [Danio rerio]
gi|262478803|gb|ACY68415.1| glycine receptor alpha 2 subunit [Danio rerio]
Length = 448
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 83 TETTMDYRVNIFLRQKWNDPRLAYSEYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHD 141
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI DG +LY + +
Sbjct: 142 VTTDNKLLRIFKDGTVLYSIRL 163
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY
Sbjct: 112 SSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLY 159
>gi|399567821|ref|NP_001257802.1| gamma-aminobutyric acid receptor subunit gamma-3 isoform 2
precursor [Homo sapiens]
gi|119578062|gb|EAW57658.1| gamma-aminobutyric acid (GABA) A receptor, gamma 3, isoform CRA_a
[Homo sapiens]
Length = 253
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|14010349|gb|AAK51962.1|AF362764_1 glycine receptor alpha 3 subunit [Mus musculus]
Length = 463
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNK 148
Query: 82 LVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 LLRIFKNGNVLYSIRL 164
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 114 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 160
>gi|402873157|ref|XP_003900452.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-1
[Papio anubis]
Length = 481
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 117 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 175
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 176 KLLRISRNGNVLYSIRI 192
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 142 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 190
>gi|355691822|gb|EHH27007.1| hypothetical protein EGK_17101 [Macaca mulatta]
Length = 515
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|194894096|ref|XP_001978007.1| GG17930 [Drosophila erecta]
gi|190649656|gb|EDV46934.1| GG17930 [Drosophila erecta]
Length = 512
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH++ +TVPN
Sbjct: 51 DYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNK 109
Query: 82 LVRINPDGEILYMLSI 97
L+R++ +G ILY + +
Sbjct: 110 LLRLDQNGGILYSMRL 125
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH++ +TVPN L+R++ +G ILY +
Sbjct: 74 KSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSM 123
>gi|195479054|ref|XP_002100748.1| GE17237 [Drosophila yakuba]
gi|194188272|gb|EDX01856.1| GE17237 [Drosophila yakuba]
Length = 512
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH++ +TVPN
Sbjct: 51 DYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNK 109
Query: 82 LVRINPDGEILYMLSI 97
L+R++ +G ILY + +
Sbjct: 110 LLRLDQNGGILYSMRL 125
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH++ +TVPN L+R++ +G ILY +
Sbjct: 74 KSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSM 123
>gi|301624789|ref|XP_002941681.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2
[Xenopus (Silurana) tropicalis]
Length = 505
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 140 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 198
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 199 MLRIWNDGRVLYTLRL 214
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 163 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 212
>gi|281360961|ref|NP_573090.3| CG8916, isoform B [Drosophila melanogaster]
gi|66772011|gb|AAY55317.1| IP12579p [Drosophila melanogaster]
gi|272506126|gb|AAF48539.4| CG8916, isoform B [Drosophila melanogaster]
Length = 612
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH++ +TVPN
Sbjct: 153 DYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNK 211
Query: 82 LVRINPDGEILYMLSI 97
L+R++ +G ILY + +
Sbjct: 212 LLRLDQNGGILYSMRL 227
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH++ +TVPN L+R++ +G ILY +
Sbjct: 176 KSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSM 225
>gi|281360963|ref|NP_001162770.1| CG8916, isoform C [Drosophila melanogaster]
gi|272506127|gb|ACZ95305.1| CG8916, isoform C [Drosophila melanogaster]
Length = 510
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH++ +TVPN
Sbjct: 51 DYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNK 109
Query: 82 LVRINPDGEILYMLSI 97
L+R++ +G ILY + +
Sbjct: 110 LLRLDQNGGILYSMRL 125
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++ IW+P+ YF N KH++ +TVPN L+R++ +G ILY +
Sbjct: 82 MLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSM 123
>gi|241811315|ref|XP_002414577.1| glutamate-gated chloride channel, putative [Ixodes scapularis]
gi|215508788|gb|EEC18242.1| glutamate-gated chloride channel, putative [Ixodes scapularis]
Length = 299
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLK--HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
P +DY +D YL Q W D RL I +TL L+ L +WKP+++F NAK A
Sbjct: 7 PLRQDYGLDAYLEQSWLDPRLNLLRFGINETLMLSGETLTARLWKPDLFFVNAKDAAIHS 66
Query: 76 VTVPNVLVRINPDGEILY 93
+T PN LV+I+PDG +LY
Sbjct: 67 ITAPNELVKIDPDGTVLY 84
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ L L+ L +WKP+++F NAK A +T PN LV+I+PDG +LY
Sbjct: 36 ETLMLSGETLTARLWKPDLFFVNAKDAAIHSITAPNELVKIDPDGTVLY 84
>gi|348536056|ref|XP_003455513.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Oreochromis
niloticus]
Length = 449
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 82 TETTMDYRVNIFLRQKWNDPRLAYSKYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHD 140
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI DG +LY + +
Sbjct: 141 VTTDNKLLRIFKDGTVLYSIRL 162
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY
Sbjct: 111 SSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLY 158
>gi|432933168|ref|XP_004081837.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 453
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 92 DYRVNIFLRQKWNDPRLAYSKYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 150
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 151 KLLRIFKDGTVLYSIRL 167
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY
Sbjct: 116 SSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLY 163
>gi|326913722|ref|XP_003203183.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like,
partial [Meleagris gallopavo]
Length = 191
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLN-SNMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLN-SNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>gi|397473098|ref|XP_003808057.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
3 [Pan paniscus]
Length = 515
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|195555117|ref|XP_002077030.1| GD24823 [Drosophila simulans]
gi|194203048|gb|EDX16624.1| GD24823 [Drosophila simulans]
Length = 512
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH++ +TVPN
Sbjct: 51 DYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNK 109
Query: 82 LVRINPDGEILYMLSI 97
L+R++ +G ILY + +
Sbjct: 110 LLRLDQNGGILYSMRL 125
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH++ +TVPN L+R++ +G ILY +
Sbjct: 74 KSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSM 123
>gi|332238957|ref|XP_003268669.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
3 [Nomascus leucogenys]
Length = 515
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|426350894|ref|XP_004042998.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
3 [Gorilla gorilla gorilla]
Length = 515
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|189083762|ref|NP_944493.2| gamma-aminobutyric acid receptor subunit gamma-2 isoform 3
precursor [Homo sapiens]
Length = 515
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|260821583|ref|XP_002606112.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
gi|229291450|gb|EEN62122.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
Length = 446
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V+++LRQKW D RL T+ + D +L+K +W+P+++F N K A+F VTV N
Sbjct: 86 DYSVNIFLRQKWNDPRLAFTKYNHTIAV-DVSLLKQLWQPDLFFVNEKSAKFHSVTVDNK 144
Query: 82 LVRINPDGEILY 93
+RI+P+G+ILY
Sbjct: 145 FLRISPNGDILY 156
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D +L+K +W+P+++F N K A+F VTV N +RI+P+G+ILY
Sbjct: 114 DVSLLKQLWQPDLFFVNEKSAKFHSVTVDNKFLRISPNGDILY 156
>gi|119581939|gb|EAW61535.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_d
[Homo sapiens]
Length = 515
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|47227000|emb|CAG05892.1| unnamed protein product [Tetraodon nigroviridis]
Length = 525
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITK-TLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 135 DYRVNIFLRQKWNDPRLAYSKYPDPSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 193
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 194 KLLRIFKNGNVLYSIRL 210
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 160 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSI 208
>gi|269856285|gb|ACZ51425.1| cys-loop ligand-gated ion channel subunit, partial [Nasonia
vitripennis]
Length = 561
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 100 DYSMDCYFRQYWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 158
Query: 82 LVRINPDGEILYMLSI 97
L+RI +G+ILY + +
Sbjct: 159 LLRITQEGDILYSMRL 174
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI +G+ILY +
Sbjct: 131 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRITQEGDILYSM 172
>gi|195355479|ref|XP_002044219.1| GM22598 [Drosophila sechellia]
gi|194129508|gb|EDW51551.1| GM22598 [Drosophila sechellia]
Length = 510
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH++ +TVPN
Sbjct: 51 DYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSQIHMITVPNK 109
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNLV 120
+R++ +G ILY + + T R+ + +D LV
Sbjct: 110 WLRLDQNGGILYSMRLTIKATCPRELQNFPMDRQSCPLV 148
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++ IW+P+ YF N KH++ +TVPN +R++ +G ILY +
Sbjct: 82 MLDKIWRPDTYFYNGKHSQIHMITVPNKWLRLDQNGGILYSM 123
>gi|221272578|emb|CAP70074.1| GABAA receptor subunit gamma 2b [Carassius carassius]
Length = 160
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 21 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 79
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 80 MLRIWNDGRILYTLRL 95
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 44 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 93
>gi|211853298|emb|CAP17833.1| GABAA receptor subunit gamma 2a [Carassius carassius]
Length = 160
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 21 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 79
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 80 MLRIWNDGRILYTLRL 95
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 44 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 93
>gi|344288589|ref|XP_003416030.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Loxodonta
africana]
Length = 452
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|327268303|ref|XP_003218937.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Anolis
carolinensis]
Length = 455
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 162
>gi|431909787|gb|ELK12933.1| Glycine receptor subunit alpha-2 [Pteropus alecto]
Length = 352
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 30 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 88
Query: 76 VTVPNVLVRINPDGEILYML-SIIENNTNKRKQKRKALDLNDP 117
VT N L+RI+ +G++LY + +++ + + R L L+ P
Sbjct: 89 VTTDNKLLRISKNGKVLYSIRNMVSVFLEQPTEARLTLTLSCP 131
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 60 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 106
>gi|345328450|ref|XP_001514189.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Ornithorhynchus anatinus]
Length = 481
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 118 EYTIDIFFAQTWYDRRLRFNSTLKALTLNS-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 176
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 177 LLRIWNDGKVLYTLRL 192
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
KAL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 141 KALTLNS-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 190
>gi|372266072|ref|NP_001243179.1| gamma-aminobutyric acid receptor subunit gamma-2 [Danio rerio]
Length = 476
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 169 MLRIWNDGRILYTLRL 184
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 127 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 182
>gi|432895803|ref|XP_004076169.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oryzias latipes]
Length = 475
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 168 MLRIWNDGRILYTLRL 183
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 126 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 181
>gi|126336876|ref|XP_001364655.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Monodelphis
domestica]
Length = 452
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|345487406|ref|XP_001600806.2| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Nasonia
vitripennis]
Length = 570
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 109 DYSMDCYFRQYWRDSRLSFLGPIKSLSLS-IKMLERIWRPDTYFYNGKHSYVHTITVPNK 167
Query: 82 LVRINPDGEILYMLSI 97
L+RI +G+ILY + +
Sbjct: 168 LLRITQEGDILYSMRL 183
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI +G+ILY +
Sbjct: 140 MLERIWRPDTYFYNGKHSYVHTITVPNKLLRITQEGDILYSM 181
>gi|17981007|gb|AAL50804.1|AF453437_1 GABAa receptor gamma2 subunit [Morone americana]
Length = 472
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 106 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 164
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 165 MLRIWNDGRILYTLRL 180
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 123 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 178
>gi|215511351|gb|ACJ67877.1| GABAa receptor gamma2 subunit [Micropterus salmoides]
Length = 115
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 24 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 82
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 83 MLRIWNDGRILYTLRL 98
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 41 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 96
>gi|348518924|ref|XP_003446981.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oreochromis niloticus]
Length = 472
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 106 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 164
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 165 MLRIWNDGRILYTLRL 180
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 123 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 178
>gi|46048735|ref|NP_990576.1| gamma-aminobutyric acid receptor subunit gamma-4 precursor [Gallus
gallus]
gi|462150|sp|P34904.1|GBRG4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-4;
AltName: Full=GABA(A) receptor subunit gamma-4; Flags:
Precursor
gi|414022|emb|CAA51939.1| GABA-A receptor [Gallus gallus]
Length = 457
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 93 EYTIDIFFAQTWYDRRLRFNSTLKALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 151
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 152 LLRIWNDGKVLYTLRL 167
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
KAL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 116 KALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 165
>gi|54401019|gb|AAV34285.1| GABAA gamma 2 subunit [Carassius auratus]
Length = 119
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 28 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 86
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 87 MLRIWNDGRILYTLRL 102
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 45 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 100
>gi|326924426|ref|XP_003208428.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Meleagris gallopavo]
Length = 450
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 86 EYTIDIFFAQTWYDRRLRFNSTLKALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 145 LLRIWNDGKVLYTLRL 160
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
KAL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 109 KALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 158
>gi|395526938|ref|XP_003765611.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Sarcophilus
harrisii]
Length = 452
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|62531075|gb|AAH93254.1| LOC553402 protein, partial [Danio rerio]
Length = 372
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 107 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 165
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 166 MLRIWNDGRILYTLRL 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 124 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 179
>gi|410915006|ref|XP_003970978.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Takifugu rubripes]
Length = 472
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 106 EYTIDIFFAQTWYDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 164
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 165 MLRIWNDGRILYTLRL 180
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 123 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 178
>gi|348536058|ref|XP_003455514.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 87 DYRVNIFLRQKWNDPRLAYSKYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 145
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 146 KLLRIFKDGTVLYSIRL 162
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY
Sbjct: 111 SSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLY 158
>gi|1684900|gb|AAB38272.1| glycine receptor alpha 2 subunit [Homo sapiens]
Length = 360
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 162
>gi|260822691|ref|XP_002606735.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
gi|229292079|gb|EEN62745.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
Length = 421
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + L+LRQ W D RL + +TL L D LV+ +W P+++ NAK + VTV N
Sbjct: 34 DYTITLFLRQYWNDDRLIFRGVNRTLSL-DGRLVEKLWVPDIFLVNAKQSFLHTVTVDNR 92
Query: 82 LVRINPDGEILYMLSI 97
L+RI P+G++LY L +
Sbjct: 93 LIRIFPNGDVLYGLRV 108
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LV+ +W P+++ NAK + VTV N L+RI P+G++LY L
Sbjct: 62 DGRLVEKLWVPDIFLVNAKQSFLHTVTVDNRLIRIFPNGDVLYGL 106
>gi|195175701|ref|XP_002028564.1| GL25394 [Drosophila persimilis]
gi|194104908|gb|EDW26951.1| GL25394 [Drosophila persimilis]
Length = 453
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH+ +TVPN
Sbjct: 10 EYSMDCYFRQYWRDKRLSFEGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNK 68
Query: 82 LVRINPDGEILYMLSI 97
L+R+ DG ILY + +
Sbjct: 69 LLRLGQDGGILYSMRL 84
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH+ +TVPN L+R+ DG ILY +
Sbjct: 33 KSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNKLLRLGQDGGILYSM 82
>gi|321478660|gb|EFX89617.1| hypothetical protein DAPPUDRAFT_190742 [Daphnia pulex]
Length = 432
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ WQD+RL + +TL L+ +++ IWKP+ + N K + +T PN
Sbjct: 124 DYSMDCYFRQSWQDRRLSFNGPIETLSLS-IKMLEGIWKPDTFIYNGKKSYLHTITTPNK 182
Query: 82 LVRINPDGEILY 93
L+RIN DG ILY
Sbjct: 183 LLRINKDGSILY 194
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ + N K + +T PN L+RIN DG ILY
Sbjct: 155 MLEGIWKPDTFIYNGKKSYLHTITTPNKLLRINKDGSILY 194
>gi|449266636|gb|EMC77676.1| Gamma-aminobutyric acid receptor subunit gamma-4, partial [Columba
livia]
Length = 437
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 75 EYTIDIFFAQTWYDRRLRFNSTLKALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 133
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 134 LLRIWNDGKVLYTLRL 149
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
KAL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 98 KALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 147
>gi|224098554|ref|XP_002186871.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4
[Taeniopygia guttata]
Length = 447
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 85 EYTIDIFFAQTWYDRRLRFNSTLKALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 143
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 144 LLRIWNDGKVLYTLRL 159
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
KAL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 108 KALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 157
>gi|296470483|tpg|DAA12598.1| TPA: glycine receptor, alpha 2-like isoform 2 [Bos taurus]
Length = 452
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|118097444|ref|XP_425210.2| PREDICTED: glycine receptor subunit alpha-1 [Gallus gallus]
Length = 570
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 206 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 264
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 265 KLLRISRNGNVLYSIRI 281
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 231 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 279
>gi|426256680|ref|XP_004021965.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Ovis aries]
gi|426256682|ref|XP_004021966.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Ovis aries]
Length = 452
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|334311173|ref|XP_001380042.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Monodelphis domestica]
Length = 497
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 132 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 190
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 191 MLRIWNDGRVLYTLRL 206
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 155 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 204
>gi|426256684|ref|XP_004021967.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Ovis aries]
Length = 436
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|403307748|ref|XP_003944345.1| PREDICTED: glycine receptor subunit alpha-4 [Saimiri boliviensis
boliviensis]
Length = 635
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 264 TETTMDYRVNVFLRQQWNDPRLSYQEYPDNSLDL-DPSMLDSIWKPDLFFANEKGANFHE 322
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 323 VTTDNKLLRIFKNGNVLYSIRL 344
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 294 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 342
>gi|388490372|ref|NP_001253855.1| glycine receptor subunit alpha-2 [Macaca mulatta]
gi|74006483|ref|XP_548866.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Canis lupus
familiaris]
gi|114687824|ref|XP_001137132.1| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Pan
troglodytes]
gi|332223907|ref|XP_003261110.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Nomascus
leucogenys]
gi|345806787|ref|XP_003435502.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|397468133|ref|XP_003805749.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pan
paniscus]
gi|402909536|ref|XP_003917473.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Papio
anubis]
gi|410988110|ref|XP_004000331.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Felis catus]
gi|410988114|ref|XP_004000333.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Felis catus]
gi|426395224|ref|XP_004063875.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gorilla
gorilla gorilla]
gi|355757195|gb|EHH60720.1| Glycine receptor subunit alpha-2 [Macaca fascicularis]
gi|380785019|gb|AFE64385.1| glycine receptor subunit alpha-2 isoform A precursor [Macaca
mulatta]
Length = 452
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|301779950|ref|XP_002925392.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Ailuropoda melanoleuca]
Length = 452
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|149638346|ref|XP_001516922.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1
[Ornithorhynchus anatinus]
Length = 452
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDTRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|440899770|gb|ELR51025.1| Glycine receptor subunit alpha-2 [Bos grunniens mutus]
Length = 452
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|296234940|ref|XP_002762678.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Callithrix
jacchus]
gi|296234944|ref|XP_002762680.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Callithrix
jacchus]
Length = 452
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|4504021|ref|NP_002054.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|169646723|ref|NP_001112357.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|121578|sp|P23416.1|GLRA2_HUMAN RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|31849|emb|CAA36257.1| inhibitory glycine receptor [Homo sapiens]
gi|3598701|gb|AAC35290.1| glycine receptor alpha 2 subunit [Homo sapiens]
gi|34783246|gb|AAH32864.1| Glycine receptor, alpha 2 [Homo sapiens]
gi|40557000|gb|AAR87842.1| glycine receptor alpha2 subunit A [Homo sapiens]
gi|119619266|gb|EAW98860.1| glycine receptor, alpha 2, isoform CRA_c [Homo sapiens]
gi|189069147|dbj|BAG35485.1| unnamed protein product [Homo sapiens]
gi|261861444|dbj|BAI47244.1| glycine receptor, alpha 2 [synthetic construct]
gi|312151948|gb|ADQ32486.1| glycine receptor, alpha 2 [synthetic construct]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|395837966|ref|XP_003791899.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Otolemur
garnettii]
Length = 453
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|297709452|ref|XP_002831442.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pongo
abelii]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|291407098|ref|XP_002719958.1| PREDICTED: glycine receptor, alpha 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|338728947|ref|XP_003365793.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
gi|338728949|ref|XP_003365794.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|403255308|ref|XP_003920383.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|354482213|ref|XP_003503294.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Cricetulus griseus]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|194389092|dbj|BAG61563.1| unnamed protein product [Homo sapiens]
Length = 372
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 15 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 73
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 74 MLRIWNDGRVLYTLRL 89
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 38 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 87
>gi|121579|sp|P22771.1|GLRA2_RAT RecName: Full=Glycine receptor subunit alpha-2; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|6980952|ref|NP_036700.1| glycine receptor subunit alpha-2 precursor [Rattus norvegicus]
gi|392355605|ref|XP_003752087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Rattus
norvegicus]
gi|56744|emb|CAA40549.1| neonatal type of glycine receptor [Rattus norvegicus]
gi|288345|emb|CAA43471.1| inhibitory glycine receptor alpha 2A subunit [Rattus norvegicus]
gi|13548661|emb|CAC35981.1| glycine receptor alpha 2 precursor [Rattus norvegicus]
gi|149035866|gb|EDL90533.1| rCG49701, isoform CRA_b [Rattus norvegicus]
gi|227683|prf||1709209A Gly receptor subtype
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|345806789|ref|XP_857159.2| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Canis lupus
familiaris]
gi|410988116|ref|XP_004000334.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Felis catus]
Length = 436
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|296234946|ref|XP_002762681.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Callithrix
jacchus]
gi|403255312|ref|XP_003920385.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 436
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|221041716|dbj|BAH12535.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|114687834|ref|XP_001136822.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Pan
troglodytes]
gi|332223911|ref|XP_003261112.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Nomascus
leucogenys]
gi|426395228|ref|XP_004063877.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|348554547|ref|XP_003463087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Cavia
porcellus]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|344288591|ref|XP_003416031.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Loxodonta
africana]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|1363141|pir||B49970 glycine receptor alpha-2 chain - mouse
Length = 451
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 143
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 144 VTTDNKLLRISKNGKVLYSIRL 165
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 163
>gi|345307914|ref|XP_003428636.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 99 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 157
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 158 MLRIWNDGRVLYTLRL 173
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 122 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 171
>gi|327268305|ref|XP_003218938.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Anolis
carolinensis]
Length = 455
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 162
>gi|395837968|ref|XP_003791900.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Otolemur
garnettii]
Length = 437
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|34556195|ref|NP_906272.1| glycine receptor subunit alpha-2 precursor [Mus musculus]
gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|33604080|gb|AAH56342.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|46362565|gb|AAH68987.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|74228154|dbj|BAE23962.1| unnamed protein product [Mus musculus]
Length = 452
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|338728951|ref|XP_003365795.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 436
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|224042766|ref|XP_002197634.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Taeniopygia
guttata]
Length = 452
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ G++LY + +
Sbjct: 145 VTTDNKLLRISKTGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSI 164
>gi|47219236|emb|CAG11698.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 103 EYTIDIFFAQTWFDRRLKFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 161
Query: 82 LVRINPDGEILYMLSI 97
++RI DG ILY L +
Sbjct: 162 MLRIWNDGRILYTLRL 177
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG ILY L
Sbjct: 120 KFNSTMKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTL 175
>gi|46047386|ref|NP_990676.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Gallus
gallus]
gi|120785|sp|P21548.1|GBRG2_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|62897|emb|CAA38704.1| GABA-A receptor gamma-2 subunit [Gallus gallus]
Length = 474
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|148708798|gb|EDL40745.1| glycine receptor, alpha 2 subunit, isoform CRA_a [Mus musculus]
Length = 470
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 104 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 162
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 163 VTTDNKLLRISKNGKVLYSIRL 184
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 134 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 182
>gi|402909540|ref|XP_003917475.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Papio
anubis]
Length = 436
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 70 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 128
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 129 VTTDNKLLRISKNGKVLYSIRL 150
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 100 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 148
>gi|326928314|ref|XP_003210325.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Meleagris gallopavo]
Length = 474
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|126336874|ref|XP_001364595.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Monodelphis
domestica]
Length = 452
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 162
>gi|224466268|gb|ACN44176.1| glycine receptor subunit alpha 1 [Cavia porcellus]
Length = 177
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 70 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 128
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 129 KLLRISRNGNVLYSIRI 145
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 95 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 143
>gi|311273985|ref|XP_003134135.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sus scrofa]
Length = 475
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|410957680|ref|XP_003985453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Felis catus]
Length = 406
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 16 CTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
C +EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K +
Sbjct: 5 CGRTLEDYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHG 63
Query: 76 VTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 107
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 39 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 83
>gi|395505014|ref|XP_003756841.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sarcophilus harrisii]
Length = 475
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|118084056|ref|XP_001234291.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gallus
gallus]
Length = 452
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ G++LY + +
Sbjct: 145 VTTDNKLLRISKTGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSI 164
>gi|37590803|gb|AAH59389.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
Length = 475
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|73953524|ref|XP_867037.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
5 [Canis lupus familiaris]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|395526936|ref|XP_003765610.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Sarcophilus
harrisii]
Length = 452
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|351699570|gb|EHB02489.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial
[Heterocephalus glaber]
Length = 468
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 103 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 161
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 162 MLRIWNDGRVLYTLRL 177
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 126 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 175
>gi|395817118|ref|XP_003782022.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Otolemur garnettii]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|296485089|tpg|DAA27204.1| TPA: gamma-aminobutyric acid receptor subunit gamma-2 precursor
[Bos taurus]
gi|440892011|gb|ELR45398.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Bos grunniens
mutus]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|148700392|gb|EDL32339.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_b [Mus musculus]
Length = 393
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 118 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 176
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 177 MLRIWNDGRVLYTLRL 192
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 141 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 190
>gi|354490880|ref|XP_003507584.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit gamma-2-like [Cricetulus griseus]
Length = 458
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 93 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 151
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 152 MLRIWNDGRVLYTLRL 167
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 116 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 165
>gi|335304135|ref|XP_003359873.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 [Sus
scrofa]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|110645496|gb|AAI18789.1| gabrg1 protein [Xenopus (Silurana) tropicalis]
Length = 374
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|1710184|gb|AAB38273.1| glycine receptor alpha 2B subunit [Homo sapiens]
Length = 360
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 162
>gi|46371159|gb|AAS90348.1| GABA-A gamma2 long isoform [Rattus norvegicus]
gi|149052302|gb|EDM04119.1| gamma-aminobutyric acid A receptor, gamma 2 [Rattus norvegicus]
Length = 474
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|348557518|ref|XP_003464566.1| PREDICTED: glycine receptor subunit alpha-1 [Cavia porcellus]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 103 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 161
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 162 KLLRISRNGNVLYSIRI 178
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 128 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 176
>gi|403287086|ref|XP_003934788.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Saimiri boliviensis boliviensis]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|198460841|ref|XP_002135928.1| GA24024 [Drosophila pseudoobscura pseudoobscura]
gi|198139747|gb|EDY70824.1| GA24024 [Drosophila pseudoobscura pseudoobscura]
Length = 502
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D Y RQ W+D+RL K+L L+ L K IW+P+ YF N KH+ +TVPN
Sbjct: 59 EYSMDCYFRQYWRDKRLSFEGPIKSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNK 117
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
L+R+ DG ILY + + T + K +D
Sbjct: 118 LLRLGQDGGILYSMRLTIKATCPMELKNFPMD 149
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L+ L K IW+P+ YF N KH+ +TVPN L+R+ DG ILY +
Sbjct: 82 KSLSLSIKMLDK-IWRPDTYFYNGKHSHIHTITVPNKLLRLGQDGGILYSM 131
>gi|6679915|ref|NP_032099.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Mus musculus]
gi|20141351|sp|P22723.3|GBRG2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|14626496|gb|AAK71573.1|AF233775_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626500|gb|AAK71575.1|AF233777_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626510|gb|AAK71580.1|AF233782_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626514|gb|AAK71582.1|AF233784_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626520|gb|AAK71585.1|AF233787_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626522|gb|AAK71586.1|AF233788_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626524|gb|AAK71587.1|AF233789_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626526|gb|AAK71588.1|AF233790_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626528|gb|AAK71589.1|AF233791_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626536|gb|AAK71593.1|AF233795_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626542|gb|AAK71596.1|AF233798_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626546|gb|AAK71598.1|AF233800_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626548|gb|AAK71599.1|AF233801_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|193404|gb|AAA37653.1| GABA-alpha receptor gamma-2 subunit [Mus musculus]
gi|21619326|gb|AAH31762.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 [Mus
musculus]
gi|148700391|gb|EDL32338.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_a [Mus musculus]
Length = 474
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|426230044|ref|XP_004009093.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Ovis aries]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|395817120|ref|XP_003782023.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Otolemur garnettii]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|343469067|gb|AEM43800.1| gamma-aminobutyric acid A receptor subunit gamma-2 [Xenopus laevis]
Length = 464
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 107 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 165
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 166 MLRIWNDGRVLYTLRL 181
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 130 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 179
>gi|34328527|ref|NP_899156.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Rattus
norvegicus]
gi|120788|sp|P18508.1|GBRG2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|204218|gb|AAC42036.1| GABA-A receptor gamma-2 subunit [Rattus norvegicus]
Length = 466
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|426256678|ref|XP_004021964.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Ovis aries]
Length = 452
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|426230046|ref|XP_004009094.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Ovis aries]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|403287088|ref|XP_003934789.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Saimiri boliviensis boliviensis]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|395505016|ref|XP_003756842.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Sarcophilus harrisii]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|149726126|ref|XP_001503417.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Equus caballus]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|14626498|gb|AAK71574.1|AF233776_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626502|gb|AAK71576.1|AF233778_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626504|gb|AAK71577.1|AF233779_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626506|gb|AAK71578.1|AF233780_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626508|gb|AAK71579.1|AF233781_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626512|gb|AAK71581.1|AF233783_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626516|gb|AAK71583.1|AF233785_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626518|gb|AAK71584.1|AF233786_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626530|gb|AAK71590.1|AF233792_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626532|gb|AAK71591.1|AF233793_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626534|gb|AAK71592.1|AF233794_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626538|gb|AAK71594.1|AF233796_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626540|gb|AAK71595.1|AF233797_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626544|gb|AAK71597.1|AF233799_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626550|gb|AAK71600.1|AF233802_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
Length = 474
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|193406|gb|AAB59635.1| gamma-aminobutyric acid A receptor gamma-2 subunit [Mus musculus]
Length = 466
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|57085659|ref|XP_546259.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Canis lupus familiaris]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|149726124|ref|XP_001503421.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Equus caballus]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|27806989|ref|NP_776970.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Bos
taurus]
gi|120784|sp|P22300.1|GBRG2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|163070|gb|AAA30531.1| gamma-aminobutyrate receptor type A gamma-2 subuni [Bos taurus]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFGQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|449267234|gb|EMC78200.1| Gamma-aminobutyric acid receptor subunit gamma-2, partial [Columba
livia]
Length = 430
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 73 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 131
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 132 MLRIWNDGRVLYTLRL 147
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 96 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 145
>gi|326914205|ref|XP_003203417.1| PREDICTED: glycine receptor subunit alpha-2-like [Meleagris
gallopavo]
Length = 410
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 44 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 102
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ G++LY + +
Sbjct: 103 VTTDNKLLRISKTGKVLYSIRL 124
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ G++LY
Sbjct: 74 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLY 120
>gi|300798570|ref|NP_001179843.1| glycine receptor subunit alpha-2 precursor [Bos taurus]
gi|296470482|tpg|DAA12597.1| TPA: glycine receptor, alpha 2-like isoform 1 [Bos taurus]
Length = 452
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|38788155|ref|NP_944494.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Homo sapiens]
gi|332238953|ref|XP_003268667.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Nomascus leucogenys]
gi|397473094|ref|XP_003808055.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Pan paniscus]
gi|426350892|ref|XP_004042997.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Gorilla gorilla gorilla]
gi|119581936|gb|EAW61532.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_a
[Homo sapiens]
gi|380783785|gb|AFE63768.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Macaca mulatta]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|38788135|ref|NP_000807.2| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Homo sapiens]
gi|197097822|ref|NP_001127212.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Pongo
abelii]
gi|387763055|ref|NP_001248707.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Macaca
mulatta]
gi|332238955|ref|XP_003268668.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Nomascus leucogenys]
gi|397473096|ref|XP_003808056.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Pan paniscus]
gi|426350890|ref|XP_004042996.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Gorilla gorilla gorilla]
gi|75061993|sp|Q5REA1.1|GBRG2_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|116242488|sp|P18507.2|GBRG2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|5738138|gb|AAD50273.1| gamma-aminobutyric acid A receptor gamma 2 [Homo sapiens]
gi|46854833|gb|AAH69348.1| Gamma-aminobutyric acid A receptor, gamma 2, isoform 2 precursor
[Homo sapiens]
gi|50959647|gb|AAH74795.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Homo sapiens]
gi|55726269|emb|CAH89906.1| hypothetical protein [Pongo abelii]
gi|119581937|gb|EAW61533.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_b
[Homo sapiens]
gi|380783787|gb|AFE63769.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Macaca mulatta]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|296192689|ref|XP_002744182.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Callithrix jacchus]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|410949358|ref|XP_003981390.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Felis catus]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|351714691|gb|EHB17610.1| Glycine receptor subunit alpha-2, partial [Heterocephalus glaber]
Length = 311
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 162
>gi|348575247|ref|XP_003473401.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Cavia porcellus]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|296192687|ref|XP_002744181.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Callithrix jacchus]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|355704623|gb|EHH30548.1| Glycine receptor subunit alpha-2, partial [Macaca mulatta]
Length = 385
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 19 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 77
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 78 VTTDNKLLRISKNGKVLYSIRL 99
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 49 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 97
>gi|444741657|ref|NP_803127.3| gamma-aminobutyric acid receptor subunit gamma-2 isoform 2
precursor [Mus musculus]
Length = 466
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|431918113|gb|ELK17341.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Pteropus alecto]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|395837964|ref|XP_003791898.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Otolemur
garnettii]
Length = 453
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|344265230|ref|XP_003404688.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Loxodonta africana]
Length = 475
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|74205307|dbj|BAE23157.1| unnamed protein product [Mus musculus]
Length = 445
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 146
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 147 MLRIWNDGRVLYTLRL 162
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 111 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 160
>gi|348575249|ref|XP_003473402.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Cavia porcellus]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|296234942|ref|XP_002762679.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Callithrix
jacchus]
Length = 452
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|26338570|dbj|BAC32956.1| unnamed protein product [Mus musculus]
Length = 453
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 146
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 147 MLRIWNDGRVLYTLRL 162
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 111 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 160
>gi|20750081|gb|AAM23269.1| glycine-gated ion channel alpha1 subunit [Morone americana]
Length = 448
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 86 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 144
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 145 KLLRISKNGNVLYSIRI 161
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G +LY
Sbjct: 111 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY 157
>gi|26340598|dbj|BAC33961.1| unnamed protein product [Mus musculus]
Length = 384
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|444518645|gb|ELV12281.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Tupaia chinensis]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|410949360|ref|XP_003981391.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Felis catus]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|431918064|gb|ELK17292.1| Glycine receptor subunit alpha-1 [Pteropus alecto]
Length = 443
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 79 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 137
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 138 KLLRISRNGNVLYSIRI 154
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 104 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 150
>gi|403255310|ref|XP_003920384.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|344265232|ref|XP_003404689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Loxodonta africana]
Length = 467
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|169646728|ref|NP_001112358.1| glycine receptor subunit alpha-2 isoform B precursor [Homo sapiens]
gi|40557002|gb|AAR87843.1| glycine receptor alpha2 subunit B [Homo sapiens]
gi|47496633|emb|CAG29339.1| GLRA2 [Homo sapiens]
gi|119619265|gb|EAW98859.1| glycine receptor, alpha 2, isoform CRA_b [Homo sapiens]
gi|158260145|dbj|BAF82250.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|345327023|ref|XP_003431119.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2
[Ornithorhynchus anatinus]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDTRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|291407100|ref|XP_002719959.1| PREDICTED: glycine receptor, alpha 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|194227682|ref|XP_001489514.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Equus
caballus]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|148700393|gb|EDL32340.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_c [Mus musculus]
Length = 331
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 129 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 187
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 188 MLRIWNDGRVLYTLRL 203
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 152 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 201
>gi|74006497|ref|XP_857203.1| PREDICTED: glycine receptor subunit alpha-2 isoform 9 [Canis lupus
familiaris]
gi|114687826|ref|XP_001137046.1| PREDICTED: glycine receptor subunit alpha-2 isoform 7 [Pan
troglodytes]
gi|332223909|ref|XP_003261111.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Nomascus
leucogenys]
gi|397468135|ref|XP_003805750.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Pan
paniscus]
gi|402909538|ref|XP_003917474.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Papio
anubis]
gi|410988112|ref|XP_004000332.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Felis catus]
gi|426395226|ref|XP_004063876.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|354482211|ref|XP_003503293.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Cricetulus griseus]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|281353495|gb|EFB29079.1| hypothetical protein PANDA_014885 [Ailuropoda melanoleuca]
Length = 431
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 70 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 128
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 129 KLLRISKNGKVLYSIRL 145
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 95 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 143
>gi|410914369|ref|XP_003970660.1| PREDICTED: glycine receptor subunit alpha-4-like [Takifugu
rubripes]
Length = 455
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRLNVFLRQKWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 143
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI DG +LY + +
Sbjct: 144 VTTDNKLLRIFQDGSVLYSIRL 165
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY
Sbjct: 109 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLY 161
>gi|301779952|ref|XP_002925393.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Ailuropoda melanoleuca]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|148708799|gb|EDL40746.1| glycine receptor, alpha 2 subunit, isoform CRA_b [Mus musculus]
Length = 407
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 29 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 87
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 88 KLLRISKNGKVLYSIRL 104
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 54 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 102
>gi|326668762|ref|XP_001920261.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Danio rerio]
Length = 444
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D+ Q W D RL+++S K L LN N+V IW P+ F N+K A+ ++T PN
Sbjct: 86 EYQIDIIFAQTWTDSRLRYNSTMKILTLN-SNMVGLIWLPDTIFRNSKSADSHWITTPNQ 144
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 145 LLRIWNDGKILYTLRLTIN 163
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 77 TVPNVLVRINPDGEIL-----YMLSIIENNTNKRKQKR-----KALDLNDPNLVKAIWKP 126
TV +V + +N G + Y + II T + R K L LN N+V IW P
Sbjct: 66 TVIDVDIYVNSIGPVSSINMEYQIDIIFAQTWTDSRLRYNSTMKILTLN-SNMVGLIWLP 124
Query: 127 EVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ F N+K A+ ++T PN L+RI DG+ILY L
Sbjct: 125 DTIFRNSKSADSHWITTPNQLLRIWNDGKILYTL 158
>gi|31851|emb|CAA36258.1| inhibitory glycine receptor [Homo sapiens]
Length = 449
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 158
>gi|198420850|ref|XP_002119743.1| PREDICTED: similar to gamma-aminobutyric acid A receptor, alpha 6
[Ciona intestinalis]
Length = 500
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 18 PAIE---DYEVDLYLRQKWQDQRLKHHSITKT---LDLNDPNLVKAIWKPEVYFPNAKHA 71
PA E DY +D++ RQ+W+D+RL + K L LN+ N+V+ +W P+ +F N K +
Sbjct: 72 PASEQDMDYTLDMFFRQRWRDERLAFKHMNKNITELKLNN-NMVQRLWTPDSFFRNGKKS 130
Query: 72 EFQYVTVPNVLVRINPDGEILYMLSI 97
+TVPN L+RI+P+G ILY + +
Sbjct: 131 IAHNITVPNRLLRIDPNGNILYTMRL 156
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ N+V+ +W P+ +F N K + +TVPN L+RI+P+G ILY +
Sbjct: 107 LKLNN-NMVQRLWTPDSFFRNGKKSIAHNITVPNRLLRIDPNGNILYTM 154
>gi|348554549|ref|XP_003463088.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Cavia
porcellus]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|402873316|ref|XP_003900525.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like,
partial [Papio anubis]
Length = 327
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 130 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 188
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 189 MLRIWNDGRVLYTLRL 204
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 153 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 202
>gi|440904075|gb|ELR54641.1| Glycine receptor subunit alpha-1, partial [Bos grunniens mutus]
Length = 443
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 71 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 129
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 130 KLLRISRNGNVLYSIRI 146
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 96 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 144
>gi|444519297|gb|ELV12724.1| Glutamate receptor 2 [Tupaia chinensis]
Length = 1375
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 16 CTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEF 73
C+ + +DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F
Sbjct: 71 CSVSPQDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANF 130
Query: 74 QYVTVPNVLVRINPDGEILYMLSI 97
VT N+L+ I DG++L + +
Sbjct: 131 HDVTQENILLFIFRDGDVLVSMRL 154
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 108 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 149
>gi|392355603|ref|XP_003752086.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Rattus
norvegicus]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 150 KLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>gi|344265669|ref|XP_003404905.1| PREDICTED: glycine receptor subunit alpha-1 [Loxodonta africana]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 134 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 192
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 193 KLLRISRNGNVLYSIRI 209
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 159 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 207
>gi|189092755|gb|ACD75818.1| gamma-aminobutyric acid A receptor gamma 2 [Felis catus]
Length = 453
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 96 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 154
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 155 MLRIWNDGRVLYTLRL 170
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 119 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 168
>gi|426229948|ref|XP_004009045.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Ovis aries]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|281345134|gb|EFB20718.1| hypothetical protein PANDA_000329 [Ailuropoda melanoleuca]
Length = 257
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>gi|19881338|gb|AAM00910.1|AF488379_1 glycine receptor alphaZ1L subunit [Danio rerio]
Length = 459
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 96 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 154
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 155 KLLRISKNGNVLYSIRI 171
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G +LY
Sbjct: 121 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY 167
>gi|426229946|ref|XP_004009044.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Ovis aries]
Length = 449
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|148675854|gb|EDL07801.1| glycine receptor, alpha 1 subunit [Mus musculus]
Length = 430
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 66 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 124
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 125 KLLRISRNGNVLYSIRI 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 91 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 139
>gi|449270932|gb|EMC81575.1| Glycine receptor subunit alpha-2 [Columba livia]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ G++LY + +
Sbjct: 150 KLLRISKTGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSI 164
>gi|410917370|ref|XP_003972159.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 510
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 130 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDN 188
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 189 KLLRIFKNGNVLYSIRL 205
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 155 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSI 203
>gi|291387674|ref|XP_002710218.1| PREDICTED: glycine receptor, alpha 1 (startle
disease/hyperekplexia, stiff man syndrome)-like
[Oryctolagus cuniculus]
Length = 449
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 78 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 136
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 137 KLLRISRNGNVLYSIRI 153
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 103 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 149
>gi|281339746|gb|EFB15330.1| hypothetical protein PANDA_009579 [Ailuropoda melanoleuca]
Length = 435
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 71 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 129
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 130 KLLRISRNGNVLYSIRI 146
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 96 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 142
>gi|225659|prf||1309300A Gly receptor
Length = 427
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 63 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 121
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 122 KLLRISRNGNVLYSIRI 138
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 88 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 136
>gi|395542375|ref|XP_003773108.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Sarcophilus harrisii]
Length = 481
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 179
>gi|326928546|ref|XP_003210438.1| PREDICTED: glycine receptor subunit alpha-1-like [Meleagris
gallopavo]
Length = 474
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 110 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 168
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 169 KLLRISRNGNVLYSIRI 185
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 135 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 183
>gi|27805793|ref|NP_776746.1| glycine receptor subunit alpha-1 precursor [Bos taurus]
gi|12644526|sp|P57695.1|GLRA1_BOVIN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|10180959|gb|AAG14346.1|AF268375_1 glycine receptor alpha 1 subunit [Bos taurus]
gi|296485141|tpg|DAA27256.1| TPA: glycine receptor subunit alpha-1 precursor [Bos taurus]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|348527838|ref|XP_003451426.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like,
partial [Oreochromis niloticus]
Length = 358
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D+ Q W D RL+++S K L LN N+V IW P+ F N+K A+ ++T+PN
Sbjct: 1 EYQIDIIFAQTWTDSRLRYNSTMKILTLNS-NMVGLIWLPDTIFRNSKTADSHWITMPNQ 59
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 60 LLRIWNDGKILYTLRLTIN 78
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K A+ ++T+PN L+RI DG+ILY L
Sbjct: 24 KILTLNS-NMVGLIWLPDTIFRNSKTADSHWITMPNQLLRIWNDGKILYTL 73
>gi|301770749|ref|XP_002920804.1| PREDICTED: glycine receptor subunit alpha-1-like [Ailuropoda
melanoleuca]
Length = 469
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 105 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 163
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 164 KLLRISRNGNVLYSIRI 180
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 130 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 176
>gi|444723710|gb|ELW64349.1| Glycine receptor subunit alpha-1 [Tupaia chinensis]
Length = 449
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 158
>gi|224042764|ref|XP_002197622.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Taeniopygia
guttata]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ G++LY + +
Sbjct: 150 KLLRISKTGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSI 164
>gi|363728848|ref|XP_003640566.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gallus
gallus]
Length = 452
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 91 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 149
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ G++LY + +
Sbjct: 150 KLLRISKTGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSI 164
>gi|18858759|ref|NP_571477.1| glycine receptor subunit alphaZ1 precursor [Danio rerio]
gi|6647527|sp|O93430.1|GLRA1_DANRE RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor
gi|3378596|emb|CAA06711.1| glycine receptor, alphaZ1 subunit [Danio rerio]
gi|190339620|gb|AAI62943.1| Glycine receptor, alpha 1 [Danio rerio]
gi|190339628|gb|AAI62956.1| Glycine receptor, alpha 1 [Danio rerio]
Length = 444
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 81 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 139
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 140 KLLRISKNGNVLYSIRI 156
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G +LY
Sbjct: 106 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY 152
>gi|350594488|ref|XP_003483909.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Sus
scrofa]
Length = 448
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|344248721|gb|EGW04825.1| Glycine receptor subunit alpha-3 [Cricetulus griseus]
Length = 147
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT
Sbjct: 3 KDYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTD 61
Query: 80 NVLVRINPDGEILYMLSIIENNTNKRKQKRKA 111
N L+RI +G +LY + N ++ K K+
Sbjct: 62 NKLLRIFKNGNVLYSIRKDFKNAGWQRTKMKS 93
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 29 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 77
>gi|297676457|ref|XP_002816152.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pongo
abelii]
Length = 449
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|119582060|gb|EAW61656.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_a [Homo sapiens]
Length = 422
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 50 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 108
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 109 KLLRISRNGNVLYSIRI 125
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 75 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 121
>gi|12230887|sp|P07727.4|GLRA1_RAT RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|56469|emb|CAA38987.1| inhibitory glycine receptor alpha-1 subunit [Rattus norvegicus]
gi|13548657|emb|CAC35979.1| glycine receptor alpha 1 [Rattus norvegicus]
gi|149052670|gb|EDM04487.1| glycine receptor, alpha 1 subunit, isoform CRA_a [Rattus
norvegicus]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|12644459|sp|Q64018.2|GLRA1_MOUSE RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|9247216|gb|AAB32158.2| inhibitory glycine receptor alpha 1 subunit long form [Mus sp.]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|432880957|ref|XP_004073734.1| PREDICTED: glycine receptor subunit alphaZ1-like, partial [Oryzias
latipes]
Length = 313
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 102 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 160
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 161 KLLRISKNGNVLYSIRI 177
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G +LY +
Sbjct: 127 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSI 175
>gi|350594490|ref|XP_003134181.3| PREDICTED: glycine receptor subunit alpha-1-like isoform 1 [Sus
scrofa]
Length = 456
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|301753451|ref|XP_002912575.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like,
partial [Ailuropoda melanoleuca]
Length = 234
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 88 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 146
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 147 MLRIWNDGRVLYTLRL 162
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 111 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 160
>gi|403285576|ref|XP_003934098.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|297676459|ref|XP_002816153.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pongo
abelii]
Length = 457
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|395504924|ref|XP_003756796.1| PREDICTED: glycine receptor subunit alpha-1 [Sarcophilus harrisii]
Length = 450
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 86 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 144
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 145 KLLRISRNGNVLYSIRI 161
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 111 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 157
>gi|297295509|ref|XP_002804635.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Macaca
mulatta]
gi|345799501|ref|XP_003434572.1| PREDICTED: glycine receptor subunit alpha-1 [Canis lupus
familiaris]
gi|355691772|gb|EHH26957.1| hypothetical protein EGK_17048 [Macaca mulatta]
gi|355750348|gb|EHH54686.1| hypothetical protein EGM_15574 [Macaca fascicularis]
Length = 457
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|296193299|ref|XP_002744457.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Callithrix
jacchus]
Length = 457
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|119372310|ref|NP_000162.2| glycine receptor subunit alpha-1 isoform 2 precursor [Homo sapiens]
gi|114602999|ref|XP_527090.2| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Pan
troglodytes]
gi|397517672|ref|XP_003829031.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
paniscus]
gi|426350694|ref|XP_004042904.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Gorilla
gorilla gorilla]
gi|49901658|gb|AAH74980.1| Glycine receptor, alpha 1 [Homo sapiens]
gi|119582061|gb|EAW61657.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_b [Homo sapiens]
gi|189053414|dbj|BAG35580.1| unnamed protein product [Homo sapiens]
Length = 449
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 158
>gi|149035865|gb|EDL90532.1| rCG49701, isoform CRA_a [Rattus norvegicus]
Length = 273
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 81 VLVRINPDGEILY 93
L+RI+ +G++LY
Sbjct: 61 KLLRISKNGKVLY 73
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 73
>gi|225903367|ref|NP_001139512.1| glycine receptor subunit alpha-1 isoform 1 precursor [Homo sapiens]
gi|114603001|ref|XP_001169235.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
troglodytes]
gi|397517674|ref|XP_003829032.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pan
paniscus]
gi|426350696|ref|XP_004042905.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Gorilla
gorilla gorilla]
gi|116242495|sp|P23415.2|GLRA1_HUMAN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|109732076|gb|AAI14948.1| GLRA1 protein [Homo sapiens]
Length = 457
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|5725306|emb|CAB52399.1| unnamed protein product [Mus musculus]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|410949421|ref|XP_003981420.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Felis catus]
Length = 457
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|403285574|ref|XP_003934097.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|335305719|ref|XP_001926528.3| PREDICTED: glycine receptor subunit alpha-2 [Sus scrofa]
gi|426256686|ref|XP_004021968.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Ovis
aries]
Length = 363
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 61 KLLRISKNGKVLYSIRL 77
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 73
>gi|327283448|ref|XP_003226453.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-4-like
[Anolis carolinensis]
Length = 458
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S + L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 92 EYTIDIFFAQTWYDRRLRFNSSLQALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 150
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 151 LLRIWSDGKVLYTLRL 166
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+AL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 115 QALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWSDGKVLYTL 164
>gi|755778|emb|CAA68378.1| glycine receptor strychnine binding subunit [Rattus norvegicus]
Length = 427
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 63 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 121
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 122 KLLRISRNGNVLYSIRI 138
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 88 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 136
>gi|449474917|ref|XP_002195083.2| PREDICTED: glycine receptor subunit alpha-1 [Taeniopygia guttata]
Length = 450
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 86 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 144
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 145 KLLRISRNGNVLYSIRI 161
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 111 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 159
>gi|432109690|gb|ELK33766.1| Glycine receptor subunit alpha-2 [Myotis davidii]
Length = 423
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 40 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 98
Query: 81 VLVRINPDGEILYML 95
L+RI+ +G++LY +
Sbjct: 99 KLLRISKNGKVLYSI 113
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 65 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 113
>gi|338728953|ref|XP_003365796.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 363
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 61 KLLRISKNGKVLYSIRL 77
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 73
>gi|410949419|ref|XP_003981419.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Felis catus]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|221041728|dbj|BAH12541.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 61 KLLRISKNGKVLYSIRL 77
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 73
>gi|31982694|ref|NP_065238.2| glycine receptor subunit alpha-1 precursor [Mus musculus]
gi|9247215|gb|AAB32157.2| inhibitory glycine receptor alpha 1 subunit short form [Mus sp.]
gi|22535390|gb|AAM97291.1| glycine receptor alpha 1 subunit [Mus musculus]
gi|124297278|gb|AAI31950.1| Glycine receptor, alpha 1 subunit [Mus musculus]
gi|187952699|gb|AAI37726.1| Glycine receptor, alpha 1 subunit [Mus musculus]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|5725305|emb|CAB52398.1| unnamed protein product [Mus musculus]
Length = 457
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|302565620|ref|NP_001181426.1| glycine receptor subunit alpha-1 precursor [Macaca mulatta]
gi|73953614|ref|XP_546290.2| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|6980950|ref|NP_037265.1| glycine receptor subunit alpha-1 precursor [Rattus norvegicus]
gi|220751|dbj|BAA00707.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|13548655|emb|CAC35978.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|149052671|gb|EDM04488.1| glycine receptor, alpha 1 subunit, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|296193297|ref|XP_002744456.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Callithrix
jacchus]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|426229950|ref|XP_004009046.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Ovis
aries]
Length = 366
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 61 KLLRISRNGNVLYSIRI 77
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 73
>gi|345806791|ref|XP_003435503.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|410988118|ref|XP_004000335.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Felis
catus]
Length = 363
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 61 KLLRISKNGKVLYSIRL 77
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 73
>gi|284925161|ref|NP_001165413.1| glycine receptor subunit alpha-2 isoform C [Homo sapiens]
Length = 363
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 2 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 61 KLLRISKNGKVLYSIRL 77
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 73
>gi|149726160|ref|XP_001503680.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Equus
caballus]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|449267128|gb|EMC78094.1| Glycine receptor subunit alpha-1, partial [Columba livia]
Length = 452
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 88 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 146
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 147 KLLRISRNGNVLYSIRI 163
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 113 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 161
>gi|432098837|gb|ELK28332.1| Glycine receptor subunit alpha-1 [Myotis davidii]
Length = 460
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 96 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 154
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ G +LY + I
Sbjct: 155 KLLRISRSGNVLYSIRI 171
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ G +LY +
Sbjct: 121 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRSGNVLYSI 169
>gi|149726162|ref|XP_001503682.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Equus
caballus]
Length = 457
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|31637|emb|CAA33437.1| GABA-A receptor gamma 2 subunit [Homo sapiens]
gi|226325|prf||1506443A GABAa receptor gamma2
Length = 467
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQMWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYSLRL 184
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYSL 182
>gi|348515583|ref|XP_003445319.1| PREDICTED: glycine receptor subunit alpha-4-like [Oreochromis
niloticus]
Length = 454
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 83 TETTMDYRLNVFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 141
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI DG +LY + +
Sbjct: 142 VTTDNKLLRIFQDGSVLYSIRL 163
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY
Sbjct: 113 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLY 159
>gi|444524995|gb|ELV13930.1| Glycine receptor subunit alpha-2 [Tupaia chinensis]
Length = 451
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 67 DYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 125
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G++LY + +
Sbjct: 126 KLLRISKNGKVLYSIRL 142
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY
Sbjct: 92 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLY 138
>gi|291244092|ref|XP_002741938.1| PREDICTED: glycine receptor, alpha 4b-like [Saccoglossus
kowalevskii]
Length = 854
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DYE+ ++LRQ W D RL+H+S T T+ +N +++ +W P+++F NAK N+
Sbjct: 512 DYELTIFLRQSWYDPRLRHNS-TGTIVINGGDVMDMVWVPDLFFTNAKSVTIHSTPKENL 570
Query: 82 LVRINPDGEILYMLSI 97
LVRI P+G++LY L +
Sbjct: 571 LVRIEPNGDVLYSLRL 586
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DYE+ ++LRQ W D RL+H+S T T+ +N +++ W P+++F NAK N+
Sbjct: 86 DYELTIFLRQAWHDPRLRHNS-TSTIVINGGDVMDMFWVPDLFFTNAKSVTIHSTPKENL 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI+P G +LY L +
Sbjct: 145 LLRIDPSGNVLYSLRL 160
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R + +N +++ +W P+++F NAK N+LVRI P+G++LY L
Sbjct: 529 RHNSTGTIVINGGDVMDMVWVPDLFFTNAKSVTIHSTPKENLLVRIEPNGDVLYSL 584
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 88 DGEILYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 147
D E+ L ++ R + +N +++ W P+++F NAK N+L
Sbjct: 86 DYELTIFLRQAWHDPRLRHNSTSTIVINGGDVMDMFWVPDLFFTNAKSVTIHSTPKENLL 145
Query: 148 VRINPDGEILYML 160
+RI+P G +LY L
Sbjct: 146 LRIDPSGNVLYSL 158
>gi|410039916|ref|XP_003950710.1| PREDICTED: glycine receptor subunit alpha-1 [Pan troglodytes]
gi|426350698|ref|XP_004042906.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Gorilla
gorilla gorilla]
gi|109732079|gb|AAI14968.1| GLRA1 protein [Homo sapiens]
Length = 366
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 61 KLLRISRNGNVLYSIRI 77
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 73
>gi|351707767|gb|EHB10686.1| Glycine receptor subunit alpha-1 [Heterocephalus glaber]
Length = 464
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY +
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSI 158
>gi|332254999|ref|XP_003276623.1| PREDICTED: glycine receptor subunit alpha-1 [Nomascus leucogenys]
Length = 364
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|432952216|ref|XP_004085005.1| PREDICTED: glycine receptor subunit alpha-3-like [Oryzias latipes]
Length = 620
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 251 DYRVNIFLRQQWNDPRLAYAEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDN 309
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 310 KLLRIFKNGNVLYSIRL 326
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 276 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSI 324
>gi|348538138|ref|XP_003456549.1| PREDICTED: glycine receptor subunit alpha-3-like [Oreochromis
niloticus]
Length = 632
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 309 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDN 367
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 368 KLLRIFKNGNVLYSIRL 384
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 334 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSI 382
>gi|410949423|ref|XP_003981421.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Felis
catus]
Length = 366
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 61 KLLRISRNGNVLYSIRI 77
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 73
>gi|308494805|ref|XP_003109591.1| CRE-LGC-41 protein [Caenorhabditis remanei]
gi|308245781|gb|EFO89733.1| CRE-LGC-41 protein [Caenorhabditis remanei]
Length = 553
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+ ++VDLY+ WQD RL H+ L +N+ + K IW P++YF NA+ A FQ VTVPN
Sbjct: 85 QSFDVDLYVYMSWQDTRLAHNFSDYVL-INNDEIRKQIWLPDLYFANARQASFQEVTVPN 143
Query: 81 VLVRINPDGEILY 93
+ + PDG + Y
Sbjct: 144 FNLFVAPDGTVAY 156
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+N+ + K IW P++YF NA+ A FQ VTVPN + + PDG + Y
Sbjct: 112 INNDEIRKQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVAY 156
>gi|432877241|ref|XP_004073116.1| PREDICTED: glycine receptor subunit alpha-4-like [Oryzias latipes]
Length = 486
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 76 TETTMDYRLNVFLRQNWNDPRLAYSEYPDNSLDL-DPSMLDSIWKPDLFFANEKGANFHE 134
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI DG +LY + +
Sbjct: 135 VTTDNKLLRIFQDGSVLYSIRL 156
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY +
Sbjct: 106 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSI 154
>gi|268578519|ref|XP_002644242.1| Hypothetical protein CBG17253 [Caenorhabditis briggsae]
Length = 592
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
++VDLY+ WQD RL H+ L +N+ + K IW P++YF NA+ A FQ VTVPN
Sbjct: 73 FDVDLYVYMSWQDTRLAHNFSNYVL-INNDEIRKQIWLPDLYFANARQASFQEVTVPNFN 131
Query: 83 VRINPDGEILY 93
+ + PDG + Y
Sbjct: 132 LFVAPDGTVAY 142
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+N+ + K IW P++YF NA+ A FQ VTVPN + + PDG + Y
Sbjct: 98 INNDEIRKQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVAY 142
>gi|402870884|ref|XP_003899427.1| PREDICTED: glycine receptor subunit alpha-3-like [Papio anubis]
Length = 199
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|345307955|ref|XP_001508794.2| PREDICTED: glycine receptor subunit alpha-1 [Ornithorhynchus
anatinus]
Length = 477
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 107 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 165
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 166 KLLRISRNGNVLYSIRI 182
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 132 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 178
>gi|327260685|ref|XP_003215164.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Anolis carolinensis]
Length = 474
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLRFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>gi|149052672|gb|EDM04489.1| glycine receptor, alpha 1 subunit, isoform CRA_c [Rattus
norvegicus]
Length = 366
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 2 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 61 KLLRISRNGNVLYSIRI 77
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 73
>gi|149027776|gb|EDL83254.1| rCG54745 [Rattus norvegicus]
Length = 207
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 177
>gi|301607542|ref|XP_002933371.1| PREDICTED: glycine receptor subunit alpha-3-like [Xenopus
(Silurana) tropicalis]
Length = 449
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY ++++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRLNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 149 KLLRIFKDGNVLYSIRL 165
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI DG +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLY 161
>gi|56181507|gb|AAV83800.1| glycine receptor alpha 1 variant [Rattus norvegicus]
Length = 419
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|26327955|dbj|BAC27718.1| unnamed protein product [Mus musculus]
Length = 465
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ +E ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSEAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWSDGRVLYTLRLTIN 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ +E ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSEAHWITTPNRLLRIWSDGRVLYTL 180
>gi|392342532|ref|XP_003754619.1| PREDICTED: glycine receptor subunit alpha-3-like, partial [Rattus
norvegicus]
gi|392353942|ref|XP_003751640.1| PREDICTED: glycine receptor subunit alpha-3-like, partial [Rattus
norvegicus]
Length = 225
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 177
>gi|23308635|ref|NP_694497.1| glycine receptor subunit alpha-3 precursor [Danio rerio]
gi|14041784|emb|CAC38837.1| glycine receptor alphaZ3 subunit [Danio rerio]
Length = 450
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSI 163
>gi|190337591|gb|AAI63529.1| Glycine receptor, alpha 3 [Danio rerio]
Length = 450
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSI 163
>gi|47214124|emb|CAG01382.1| unnamed protein product [Tetraodon nigroviridis]
Length = 472
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D+ Q W D RL+++S K L LN N+V IW P+ F N+K A+ ++T+PN
Sbjct: 90 EYQIDIIFAQTWIDSRLRYNSTMKLLTLNS-NMVGLIWLPDTIFRNSKTADSHWITMPNQ 148
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 149 LLRIWNDGKILYTLRLTIN 167
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K A+ ++T+PN L+RI DG+ILY L
Sbjct: 113 KLLTLNS-NMVGLIWLPDTIFRNSKTADSHWITMPNQLLRIWNDGKILYTL 162
>gi|334331046|ref|XP_001371691.2| PREDICTED: glycine receptor subunit alpha-3 [Monodelphis domestica]
Length = 477
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 102 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 160
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 161 KLLRIFKNGNVLYSIRL 177
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 127 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 175
>gi|321478277|gb|EFX89234.1| hypothetical protein DAPPUDRAFT_40350 [Daphnia pulex]
Length = 426
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKT---LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+ +D Y RQ W+D RL H ++K+ L L+ +++ IWKP+ YF N K++ +T P
Sbjct: 47 FSLDCYFRQTWRDTRLAHQQVSKSDDQLSLS-VSMLDRIWKPDTYFYNGKNSYLHTITTP 105
Query: 80 NVLVRINPDGEILY 93
N LVR+ PDG ILY
Sbjct: 106 NKLVRLFPDGRILY 119
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K++ +T PN LVR+ PDG ILY
Sbjct: 79 SMLDRIWKPDTYFYNGKNSYLHTITTPNKLVRLFPDGRILY 119
>gi|449500869|ref|XP_002194402.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Taeniopygia guttata]
Length = 564
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 200 PINMEYTIDIIFAQTWYDSRLKFNSSMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 258
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 259 TPNRLLRIWSDGRVLYTLRLTIN 281
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 227 KVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 276
>gi|403284708|ref|XP_003933700.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Saimiri boliviensis boliviensis]
Length = 404
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 16 CTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
C EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K +
Sbjct: 5 CGRTSEDYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHG 63
Query: 76 VTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 107
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 39 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 83
>gi|194374465|dbj|BAG57128.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 16 CTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
C EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K +
Sbjct: 5 CGRTSEDYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHG 63
Query: 76 VTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 107
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 39 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 83
>gi|297673422|ref|XP_002814764.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pongo abelii]
gi|397490149|ref|XP_003816070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan paniscus]
Length = 404
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 16 CTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
C EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K +
Sbjct: 5 CGRTSEDYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHG 63
Query: 76 VTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 107
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 39 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 83
>gi|345307468|ref|XP_001505679.2| PREDICTED: glycine receptor subunit alpha-3-like [Ornithorhynchus
anatinus]
Length = 447
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 78 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 136
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 137 KLLRIFKNGNVLYSIRL 153
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 103 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 151
>gi|121580|sp|P24524.1|GLRA3_RAT RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|204883|gb|AAA63492.1| inhibitory glycine receptor alpha subunit [Rattus norvegicus]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|281341890|gb|EFB17474.1| hypothetical protein PANDA_011670 [Ailuropoda melanoleuca]
Length = 442
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 70 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 128
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 129 KLLRIFKNGNVLYSIRL 145
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 95 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 141
>gi|382928887|gb|AFG29909.1| glutamate-gated chloride channel 4, partial [Tetranychus urticae]
Length = 471
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI---TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
+Y + + R++W+D RL++H + + L L DP+ IWKP+++F N K F + +
Sbjct: 94 EYALQITFREQWKDDRLQYHDLDGKIRFLTLTDPD---RIWKPDLFFSNEKSGHFHNIIM 150
Query: 79 PNVLVRINPDGEILYMLSI 97
PNVL+RI P+GEILY + I
Sbjct: 151 PNVLLRIYPNGEILYSIRI 169
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 108 KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K + L L DP+ IWKP+++F N K F + +PNVL+RI P+GEILY +
Sbjct: 118 KIRFLTLTDPD---RIWKPDLFFSNEKSGHFHNIIMPNVLLRIYPNGEILYSI 167
>gi|351707180|gb|EHB10099.1| Glycine receptor subunit alpha-4 [Heterocephalus glaber]
Length = 488
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 117 TETTMDYWVNVFLRQQWNDPRLAYQEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 175
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 176 VTTDNKLLRIFKNGNVLYSIRL 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 147 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 195
>gi|348566767|ref|XP_003469173.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit
alpha-3-like [Cavia porcellus]
Length = 480
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 177
>gi|326918628|ref|XP_003205590.1| PREDICTED: glycine receptor subunit alpha-3-like [Meleagris
gallopavo]
Length = 486
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 129 DYRVNIFLRQNWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 187
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 188 KLLRIFKNGNVLYSIRL 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 154 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 202
>gi|291385940|ref|XP_002709523.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 1
[Oryctolagus cuniculus]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 163
>gi|354474419|ref|XP_003499428.1| PREDICTED: glycine receptor subunit alpha-1-like [Cricetulus
griseus]
Length = 448
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V ++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVHIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>gi|344252733|gb|EGW08837.1| Glycine receptor subunit alpha-1 [Cricetulus griseus]
Length = 413
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V ++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 50 DYRVHIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 108
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 109 KLLRISRNGNVLYSIRI 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 75 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 121
>gi|155369743|ref|NP_446176.3| glycine receptor subunit alpha-3 [Rattus norvegicus]
gi|13548663|emb|CAC35982.1| glycine receptor alpha 3 precursor [Rattus norvegicus]
Length = 480
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 177
>gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|31322540|gb|AAP22967.1| glycine receptor alpha 3 subunit [Mus musculus]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|354493194|ref|XP_003508728.1| PREDICTED: glycine receptor subunit alpha-3 [Cricetulus griseus]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|156707950|gb|ABU93237.1| ligand-gated ion channel subunit [Haemonchus contortus]
Length = 542
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
++ DLY+ W+D RL H+ L +ND N+ IW P++YF NA+ A FQ VTVPN
Sbjct: 59 FDADLYVYMSWKDVRLAHNFSDYVL-INDDNMRNQIWLPDLYFANARQAHFQDVTVPNFN 117
Query: 83 VRINPDGEILYML 95
+ I PDG + Y L
Sbjct: 118 MFIAPDGTVAYSL 130
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ND N+ IW P++YF NA+ A FQ VTVPN + I PDG + Y L
Sbjct: 84 INDDNMRNQIWLPDLYFANARQAHFQDVTVPNFNMFIAPDGTVAYSL 130
>gi|410956542|ref|XP_003984901.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Felis catus]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|73993734|ref|XP_543200.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Canis lupus
familiaris]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|358413362|ref|XP_003582551.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|359067890|ref|XP_003586404.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
Length = 462
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|440908969|gb|ELR58936.1| Glycine receptor subunit alpha-3, partial [Bos grunniens mutus]
Length = 462
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|403285190|ref|XP_003933918.1| PREDICTED: glycine receptor subunit alpha-3 [Saimiri boliviensis
boliviensis]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|350592347|ref|XP_003483449.1| PREDICTED: glycine receptor subunit alpha-3 [Sus scrofa]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|120300936|ref|NP_536686.2| glycine receptor subunit alpha-3 [Mus musculus]
gi|147897779|gb|AAI40462.1| Glycine receptor, alpha 3 subunit [synthetic construct]
gi|148696654|gb|EDL28601.1| glycine receptor, alpha 3 subunit [Mus musculus]
gi|151555313|gb|AAI48712.1| Glycine receptor, alpha 3 subunit [synthetic construct]
Length = 480
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 177
>gi|351694568|gb|EHA97486.1| Glycine receptor subunit alpha-3 [Heterocephalus glaber]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|296195142|ref|XP_002745250.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Callithrix
jacchus]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|291385942|ref|XP_002709524.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 2
[Oryctolagus cuniculus]
Length = 449
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|395840067|ref|XP_003792888.1| PREDICTED: glycine receptor subunit alpha-3 [Otolemur garnettii]
Length = 474
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 100 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 158
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 159 KLLRIFKNGNVLYSIRL 175
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 125 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 171
>gi|344288257|ref|XP_003415867.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Loxodonta
africana]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|213513249|ref|NP_001133361.1| Gamma-aminobutyric acid receptor subunit delta [Salmo salar]
gi|209151957|gb|ACI33090.1| Gamma-aminobutyric acid receptor subunit delta precursor [Salmo
salar]
Length = 462
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++LRQ W+D RL ++ KTL L D V +W P+ + NAK A F VTV N
Sbjct: 85 EYTMTIFLRQSWRDDRLSYNHTNKTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 143
Query: 82 LVRINPDGEILY 93
L+R+ PDG ILY
Sbjct: 144 LIRLQPDGVILY 155
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K L L D V +W P+ + NAK A F VTV N L+R+ PDG ILY
Sbjct: 108 KTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 155
>gi|194669246|ref|XP_614803.4| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
gi|297477618|ref|XP_002689498.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|296484973|tpg|DAA27088.1| TPA: glycine receptor, alpha 3-like [Bos taurus]
Length = 447
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|426220599|ref|XP_004004502.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Ovis aries]
Length = 480
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 177
>gi|332217779|ref|XP_003258041.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Nomascus
leucogenys]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|441619761|ref|XP_004088614.1| PREDICTED: glycine receptor subunit alpha-3 [Nomascus leucogenys]
Length = 449
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|110347441|ref|NP_006520.2| glycine receptor subunit alpha-3 isoform a precursor [Homo sapiens]
gi|109076221|ref|XP_001088083.1| PREDICTED: glycine receptor subunit alpha-3-like [Macaca mulatta]
gi|114596937|ref|XP_517543.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
troglodytes]
gi|297674705|ref|XP_002815347.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pongo
abelii]
gi|397505899|ref|XP_003823478.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
paniscus]
gi|426346047|ref|XP_004040701.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Gorilla
gorilla gorilla]
gi|116242496|sp|O75311.2|GLRA3_HUMAN RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|23241723|gb|AAH36086.1| Glycine receptor, alpha 3 [Homo sapiens]
gi|119625135|gb|EAX04730.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|119625137|gb|EAX04732.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|123980142|gb|ABM81900.1| glycine receptor, alpha 3 [synthetic construct]
gi|123994945|gb|ABM85074.1| glycine receptor, alpha 3 [synthetic construct]
gi|355687730|gb|EHH26314.1| hypothetical protein EGK_16247 [Macaca mulatta]
gi|355749674|gb|EHH54073.1| hypothetical protein EGM_14823 [Macaca fascicularis]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|296195144|ref|XP_002745251.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Callithrix
jacchus]
Length = 449
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|382928883|gb|AFG29907.1| glutamate-gated chloride channel 2, partial [Tetranychus urticae]
Length = 440
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 22 DYEVDLYLRQKWQDQRLKHHS---ITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
+Y V + R++W+D+RL+++ K L L DPN IWKP+++F N K F + +
Sbjct: 94 EYSVQITFREEWRDERLQYNDNNEQIKFLTLTDPN---RIWKPDLFFSNEKEGHFHTIIM 150
Query: 79 PNVLVRINPDGEILYMLSI 97
PNVL+RI PDG +LY + I
Sbjct: 151 PNVLLRIYPDGSVLYSIRI 169
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 103 NKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
N ++ K L L DPN IWKP+++F N K F + +PNVL+RI PDG +LY +
Sbjct: 113 NDNNEQIKFLTLTDPN---RIWKPDLFFSNEKEGHFHTIIMPNVLLRIYPDGSVLYSI 167
>gi|301774518|ref|XP_002922678.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 1
[Ailuropoda melanoleuca]
Length = 462
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|110347433|ref|NP_001036008.1| glycine receptor subunit alpha-3 isoform b precursor [Homo sapiens]
gi|149698068|ref|XP_001498338.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Equus
caballus]
gi|332820616|ref|XP_003310621.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
troglodytes]
gi|395735507|ref|XP_003776595.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pongo
abelii]
gi|397505897|ref|XP_003823477.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
paniscus]
gi|426346045|ref|XP_004040700.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Gorilla
gorilla gorilla]
gi|3342236|gb|AAC39917.1| glycine receptor alpha 3 subunit [Homo sapiens]
gi|119625136|gb|EAX04731.1| glycine receptor, alpha 3, isoform CRA_b [Homo sapiens]
Length = 449
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|149698066|ref|XP_001498366.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Equus
caballus]
Length = 464
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|410956544|ref|XP_003984902.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Felis catus]
Length = 449
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|345790724|ref|XP_003433410.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|431918319|gb|ELK17546.1| Glycine receptor subunit alpha-3 [Pteropus alecto]
Length = 415
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|3342792|gb|AAC39919.1| glycine receptor alpha 3 subunit [Homo sapiens]
Length = 465
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|301774520|ref|XP_002922679.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 2
[Ailuropoda melanoleuca]
Length = 447
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|193209644|ref|NP_001123116.1| Protein LGC-41, isoform b [Caenorhabditis elegans]
gi|154147262|emb|CAO82026.1| Protein LGC-41, isoform b [Caenorhabditis elegans]
Length = 564
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
++VDLY+ WQD RL H+ L +N+ + K IW P++YF NA+ A FQ VTVPN
Sbjct: 72 FDVDLYVYMSWQDPRLAHNFSDYVL-INNDEIRKQIWLPDLYFANARQASFQEVTVPNFN 130
Query: 83 VRINPDGEILY 93
+ + PDG + Y
Sbjct: 131 LFVAPDGTVAY 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+N+ + K IW P++YF NA+ A FQ VTVPN + + PDG + Y
Sbjct: 97 INNDEIRKQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVAY 141
>gi|344288255|ref|XP_003415866.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Loxodonta
africana]
Length = 449
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|350592345|ref|XP_003132880.3| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Sus scrofa]
Length = 449
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|327268066|ref|XP_003218819.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Anolis carolinensis]
Length = 466
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITK-TLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+Y++D++ Q W D RL+ +S K +L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 101 EYQIDIFFAQTWTDSRLRFNSTMKRSLTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPN 159
Query: 81 VLVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 160 QLLRIWNDGKILYTLRLTIN 179
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 90 EILYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVR 149
+I + + ++ +++L LN N+V IW P+ F N+K AE ++T PN L+R
Sbjct: 105 DIFFAQTWTDSRLRFNSTMKRSLTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLR 163
Query: 150 INPDGEILYML 160
I DG+ILY L
Sbjct: 164 IWNDGKILYTL 174
>gi|55250367|gb|AAH85599.1| Glra4b protein, partial [Danio rerio]
Length = 532
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 125 TETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 183
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 184 VTTDNKLLRIFQNGNVLYSIRL 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 155 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSI 203
>gi|296236079|ref|XP_002763171.1| PREDICTED: glycine receptor subunit alpha-4 [Callithrix jacchus]
Length = 452
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 81 TETTMDYRVNVFLRQQWNDPRLSYQEYPDNSLDL-DPSMLDSIWKPDLFFANEKGASFHE 139
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 140 VTTDNKLLRIFKNGNVLYSIRL 161
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 111 SLDL-DPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLY 157
>gi|410896852|ref|XP_003961913.1| PREDICTED: glycine receptor subunit alpha-2-like [Takifugu
rubripes]
Length = 454
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITK-TLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 93 DYRVNIFLRQKWNDPRLAYSKYPDPSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 151
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 152 KLLRIFKNGNVLYSIRL 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 118 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLY 164
>gi|432094422|gb|ELK25993.1| Glycine receptor subunit alpha-4 [Myotis davidii]
Length = 472
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 105 TETTMDYRVNVFLRQQWHDPRLAYQEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 163
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 164 VTTDNKLLRIFKNGNVLYSIRL 185
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 135 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 181
>gi|341903349|gb|EGT59284.1| hypothetical protein CAEBREN_10979 [Caenorhabditis brenneri]
Length = 448
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
++VDLY+ WQD RL H+ + + +N+ + K IW P++YF NA+ A FQ VTVPN
Sbjct: 68 SFDVDLYVYMSWQDTRLAHN-FSDYVLINNDEIRKQIWLPDLYFANARQASFQEVTVPNF 126
Query: 82 LVRINPDGEILY 93
+ + PDG + Y
Sbjct: 127 NLFVAPDGTVAY 138
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+N+ + K IW P++YF NA+ A FQ VTVPN + + PDG + Y
Sbjct: 94 INNDEIRKQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVAY 138
>gi|321267538|ref|NP_001189440.1| glycine receptor, alpha 4b precursor [Danio rerio]
Length = 492
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 143
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 144 VTTDNKLLRIFQNGNVLYSIRL 165
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSI 163
>gi|432899526|ref|XP_004076602.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 505
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 102 TETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 160
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 161 VTTDNKLLRIFQNGNVLYSIRL 182
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 132 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSI 180
>gi|47222620|emb|CAG02985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 432
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYV 76
P +DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F V
Sbjct: 41 PTSKDYRLNVFLRQQWNDPRLAYKEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEV 99
Query: 77 TVPNVLVRINPDGEILYMLSI 97
T N L+RI +G +LY + +
Sbjct: 100 TTDNKLLRIFQNGNVLYSIRL 120
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 70 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLY 116
>gi|170590360|ref|XP_001899940.1| Neurotransmitter-gated ion-channel ligand binding domain containing
protein [Brugia malayi]
gi|158592572|gb|EDP31170.1| Neurotransmitter-gated ion-channel ligand binding domain containing
protein [Brugia malayi]
Length = 669
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY++D++LR W D+RL H + + +ND N++K IW+P +F NAK AE+ +T N
Sbjct: 340 DYDMDIWLRMAWHDRRLAHQ-FDRPILVNDENVLKKIWRPSPFFQNAKEAEYHRMTTLNF 398
Query: 82 LVRINPDGEILY 93
+ I P+GEI +
Sbjct: 399 WLYIFPNGEIFF 410
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ND N++K IW+P +F NAK AE+ +T N + I P+GEI +
Sbjct: 366 VNDENVLKKIWRPSPFFQNAKEAEYHRMTTLNFWLYIFPNGEIFF 410
>gi|326670382|ref|XP_700099.4| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Danio
rerio]
Length = 435
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++LRQ W+D RL ++ KTL L D V +W P+ + NAK A F VTV N
Sbjct: 61 EYTMTVFLRQSWRDDRLSYNHTNKTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 119
Query: 82 LVRINPDGEILY 93
L+R+ PDG ILY
Sbjct: 120 LIRLQPDGVILY 131
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K L L D V +W P+ + NAK A F VTV N L+R+ PDG ILY
Sbjct: 84 KTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 131
>gi|395542843|ref|XP_003773334.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Sarcophilus harrisii]
Length = 594
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 230 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 288
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 289 TPNRLLRIWSDGRVLYTLRLTIN 311
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 257 KVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 306
>gi|402590352|gb|EJW84282.1| hypothetical protein WUBG_04807, partial [Wuchereria bancrofti]
Length = 543
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY++D++LR W D+RL H + + +ND N++K IW+P +F NAK AE+ +T N
Sbjct: 359 DYDMDIWLRMAWHDRRLAHQ-FDRPILVNDENMLKKIWRPSPFFQNAKEAEYHRMTTLNF 417
Query: 82 LVRINPDGEILY 93
+ I P+GEI +
Sbjct: 418 WLYIFPNGEIFF 429
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ND N++K IW+P +F NAK AE+ +T N + I P+GEI +
Sbjct: 385 VNDENMLKKIWRPSPFFQNAKEAEYHRMTTLNFWLYIFPNGEIFF 429
>gi|443684184|gb|ELT88193.1| hypothetical protein CAPTEDRAFT_165308 [Capitella teleta]
Length = 328
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 22 DYEVDLYLRQKWQDQRL--KHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY +D+Y+RQ W D RL KH ++ D L IW P+++FPN K A+ +TVP
Sbjct: 2 DYTIDIYMRQSWLDTRLAFKHLFPNDSVLTLDTRLFDKIWVPDLFFPNEKRAQGHSITVP 61
Query: 80 NVLVRINPDGEILY 93
N L+RI+ DG +L+
Sbjct: 62 NRLIRISSDGRVLF 75
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D L IW P+++FPN K A+ +TVPN L+RI+ DG +L+
Sbjct: 33 DTRLFDKIWVPDLFFPNEKRAQGHSITVPNRLIRISSDGRVLF 75
>gi|63990854|gb|AAY40916.1| unknown [Homo sapiens]
Length = 74
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 1 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 59
Query: 81 VLVRINPDGEILYML 95
L+RI +G +LY +
Sbjct: 60 KLLRIFKNGNVLYSI 74
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 26 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSI 74
>gi|327273670|ref|XP_003221603.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Anolis carolinensis]
Length = 449
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 85 PINMEYTIDIIFAQTWYDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 143
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 144 TPNRLLRIWSDGRVLYTLRLTIN 166
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 106 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 161
>gi|817957|emb|CAA53468.1| glycine receptor subunit alpha 4 [Mus musculus]
Length = 337
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 62 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 120
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 121 VTTDNKLLRIFKNGNVLYSIRL 142
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 86 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 138
>gi|443685845|gb|ELT89318.1| hypothetical protein CAPTEDRAFT_127582, partial [Capitella
teleta]
Length = 398
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSIT-KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
++ V LYLRQ W+DQRL + ++ +++ LN N +W P+V+ N K F +TVPN
Sbjct: 27 EFSVTLYLRQVWRDQRLAYEGLSNRSVTLNH-NQFDRMWTPDVFIRNLKAGIFHTITVPN 85
Query: 81 VLVRINPDGEILY 93
L+R++PDG ILY
Sbjct: 86 RLIRLSPDGTILY 98
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ LN N +W P+V+ N K F +TVPN L+R++PDG ILY
Sbjct: 51 RSVTLNH-NQFDRMWTPDVFIRNLKAGIFHTITVPNRLIRLSPDGTILY 98
>gi|119575082|gb|EAW54695.1| hCG17971 [Homo sapiens]
Length = 458
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 83 SSVTKTTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 141
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 142 FHEVTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|449269965|gb|EMC80700.1| Glycine receptor subunit alpha-4, partial [Columba livia]
Length = 432
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 53 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGASFHE 111
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 112 VTTDNKLLRIFKNGNVLYSIRL 133
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 77 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLY 129
>gi|47223922|emb|CAG06099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 521
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 66 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDN 124
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 125 KLLRIFKNGNVLYSIRL 141
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 91 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSI 139
>gi|5804939|emb|CAA38992.1| GABA(A) receptor gamma-1 subunit [Mus musculus]
Length = 465
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWSDGRVLYTLRLTIN 185
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 180
>gi|18448711|gb|AAL69899.1|AF462147_1 glycine receptor alpha 4 subunit [Mus musculus]
Length = 416
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDLN P+++++IWKP+++F N K A F
Sbjct: 45 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDLN-PSMLESIWKPDLFFANEKGANFHE 103
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 104 VTTDNKLLRIFKNGNVLYSIRL 125
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDLN P+++++IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 69 REYPDDSLDLN-PSMLESIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 121
>gi|332861324|ref|XP_521197.3| PREDICTED: glycine receptor subunit alpha-4 [Pan troglodytes]
gi|397497800|ref|XP_003819692.1| PREDICTED: glycine receptor subunit alpha-4 [Pan paniscus]
Length = 457
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 83 SSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 141
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 142 FHEVTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|18034793|ref|NP_542153.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Rattus
norvegicus]
gi|120782|sp|P23574.1|GBRG1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|56176|emb|CAA40739.1| GABA(A) receptor gamma-1 subunit [Rattus norvegicus]
gi|149035305|gb|EDL90009.1| gamma-aminobutyric acid A receptor, gamma 1, isoform CRA_a [Rattus
norvegicus]
Length = 465
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWSDGRVLYTLRLTIN 185
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 180
>gi|20750089|gb|AAM23270.1| glycine-gated ion channel alpha3 subunit [Morone americana]
Length = 440
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 62 DYRVNIFLRQQWNDPRLAYAEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDN 120
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 121 KLLRIFKNGNVLYSIRL 137
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 87 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSI 135
>gi|426396913|ref|XP_004064673.1| PREDICTED: glycine receptor subunit alpha-4 [Gorilla gorilla
gorilla]
Length = 457
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 83 SSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 141
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 142 FHEVTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|355705027|gb|EHH30952.1| Glycine receptor subunit alpha-4 [Macaca mulatta]
gi|355757581|gb|EHH61106.1| Glycine receptor subunit alpha-4 [Macaca fascicularis]
Length = 453
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 82 TETTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 140
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 141 VTTDNKLLRIFKNGNVLYSIRL 162
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 106 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 158
>gi|31542878|ref|NP_034382.2| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Mus
musculus]
gi|408360110|sp|Q9R0Y8.2|GBRG1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|26329877|dbj|BAC28677.1| unnamed protein product [Mus musculus]
gi|26338950|dbj|BAC33146.1| unnamed protein product [Mus musculus]
gi|26340688|dbj|BAC34006.1| unnamed protein product [Mus musculus]
gi|71534085|gb|AAH99939.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1 [Mus
musculus]
gi|74197291|dbj|BAE43302.1| unnamed protein product [Mus musculus]
gi|148705859|gb|EDL37806.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1, isoform
CRA_b [Mus musculus]
Length = 465
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWSDGRVLYTLRLTIN 185
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 180
>gi|297710654|ref|XP_002831982.1| PREDICTED: glycine receptor subunit alpha-4 [Pongo abelii]
Length = 458
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 83 SSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 141
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 142 FHEVTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|291385730|ref|XP_002709329.1| PREDICTED: gamma-aminobutyric acid A receptor, gamma 1 [Oryctolagus
cuniculus]
Length = 628
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 267 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 325
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 326 TPNRLLRIWNDGRVLYTLRLTIN 348
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 294 KVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 343
>gi|334331365|ref|XP_001372541.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Monodelphis domestica]
Length = 571
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RL+ +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 207 PINMEYTIDIIFAQTWFDSRLRFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 265
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 266 TPNRLLRIWSDGRVLYTLRLTIN 288
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 234 KVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 283
>gi|327287938|ref|XP_003228685.1| PREDICTED: glycine receptor subunit alpha-4-like [Anolis
carolinensis]
Length = 472
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 88 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 146
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 147 VTTDNKLLRIFKNGNVLYSIRL 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 112 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 164
>gi|218156328|ref|NP_001019623.2| glycine receptor subunit alpha-4 isoform 1 precursor [Homo sapiens]
gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
Length = 417
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 83 SSITKTTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 141
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 142 FHEVTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|354500345|ref|XP_003512261.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
isoform 1 [Cricetulus griseus]
Length = 464
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 103 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 161
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 162 TPNRLLRIWSDGRVLYTLRLTIN 184
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 124 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 179
>gi|344286252|ref|XP_003414873.1| PREDICTED: glycine receptor subunit alpha-4-like [Loxodonta
africana]
Length = 458
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 87 TETTMDYRVNVFLRQQWNDPRLAYQEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 145
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 146 VTTDNKLLRIFKNGNVLYSIRL 167
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 117 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 163
>gi|301621136|ref|XP_002939916.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 84 TETTMDYRVNIFLRQTWNDPRLSYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 142
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 143 VTTDNKLLRIFKNGNVLYSIRL 164
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 114 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLY 160
>gi|291223615|ref|XP_002731805.1| PREDICTED: glycine receptor, alpha 1-like [Saccoglossus
kowalevskii]
Length = 481
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y V +YL Q+W D RL+H+S + T+ L + + IW+P++YF N K A F +VT N
Sbjct: 109 EYSVTIYLHQRWWDPRLRHNS-SNTITLYSHDFIDNIWRPDLYFDNEKKATFHHVTTDNR 167
Query: 82 LVRINPDGEILYMLSI 97
+ ++ DGE+ Y + +
Sbjct: 168 ALSVSSDGEVFYSMRL 183
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R + L + + IW+P++YF N K A F +VT N + ++ DGE+ Y +
Sbjct: 126 RHNSSNTITLYSHDFIDNIWRPDLYFDNEKKATFHHVTTDNRALSVSSDGEVFYSM 181
>gi|444520572|gb|ELV13027.1| Glycine receptor subunit alpha-4 [Tupaia chinensis]
Length = 452
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 20 IEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
+DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT
Sbjct: 84 FQDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTT 142
Query: 79 PNVLVRINPDGEILYMLSI 97
N L+RI +G +LY + +
Sbjct: 143 DNKLLRIFKNGNVLYSIRL 161
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 105 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 157
>gi|402910975|ref|XP_003918120.1| PREDICTED: glycine receptor subunit alpha-4 [Papio anubis]
Length = 457
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|354500347|ref|XP_003512262.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
isoform 2 [Cricetulus griseus]
Length = 466
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 103 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 161
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 162 TPNRLLRIWSDGRVLYTLRLTIN 184
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 124 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 179
>gi|348570472|ref|XP_003471021.1| PREDICTED: glycine receptor subunit alpha-4 [Cavia porcellus]
Length = 457
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYQEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|326918838|ref|XP_003205693.1| PREDICTED: glycine receptor subunit alpha-4-like, partial
[Meleagris gallopavo]
Length = 227
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT
Sbjct: 6 QDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTD 64
Query: 80 NVLVRINPDGEILYMLSI 97
N L+RI +G +LY + +
Sbjct: 65 NKLLRIFKNGNVLYSIRL 82
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 26 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 78
>gi|118090560|ref|XP_420725.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Gallus
gallus]
Length = 464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 100 PINMEYTIDIIFAQTWYDSRLKFNSSMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 158
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 159 TPNRLLRIWSDGRVLYTLRLTIN 181
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 121 KFNSSMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 176
>gi|224098606|ref|XP_002187221.1| PREDICTED: glycine receptor subunit alpha-4 [Taeniopygia guttata]
Length = 418
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 48 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 106
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 107 VTTDNKLLRIFKNGNVLYSIRL 128
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 72 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 124
>gi|297304473|ref|XP_001085545.2| PREDICTED: glycine receptor subunit alpha-4-like [Macaca mulatta]
Length = 457
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|345320826|ref|XP_001521787.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Ornithorhynchus anatinus]
Length = 513
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D+RL+ +K L LN N+V IW P+ +F NA+ ++ +VT
Sbjct: 151 PINMEYSIDIIFGQTWFDRRLRFPGSSKVLMLNS-NVVGKIWVPDTFFRNARKSDAHWVT 209
Query: 78 VPNVLVRINPDGEILYMLSI 97
PN L+RI DG +LY L +
Sbjct: 210 TPNRLLRIRGDGRVLYTLRL 229
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F NA+ ++ +VT PN L+RI DG +LY L
Sbjct: 178 KVLMLNS-NVVGKIWVPDTFFRNARKSDAHWVTTPNRLLRIRGDGRVLYTL 227
>gi|148705858|gb|EDL37805.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1, isoform
CRA_a [Mus musculus]
Length = 419
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 99 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 157
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 158 TPNRLLRIWSDGRVLYTLRLTIN 180
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 120 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 175
>gi|354499886|ref|XP_003512035.1| PREDICTED: glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 416
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 45 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 103
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 104 VTTDNKLLRIFKNGNVLYSIRL 125
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 69 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 121
>gi|326679648|ref|XP_689576.5| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Danio rerio]
Length = 471
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IWKP+V+F ++K + T+ N+
Sbjct: 108 DFTMTLYLRHYWKDERLAFPSSNNLSRTFDGRLVKKIWKPDVFFVHSKRSFIHDTTMENI 167
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG ILY + I + R LD + +L
Sbjct: 168 MLRVYPDGNILYSVRITVTSLCSMDFSRFPLDTQNCSL 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LVK IWKP+V+F ++K + T+ N+++R+ PDG ILY
Sbjct: 137 DGRLVKKIWKPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY 179
>gi|83405071|gb|AAI10631.1| Glycine receptor, alpha 4 subunit [Mus musculus]
gi|148691927|gb|EDL23874.1| glycine receptor, alpha 4 subunit [Mus musculus]
Length = 416
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 45 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 103
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 104 VTTDNKLLRIFKNGNVLYSIRL 125
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 69 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 121
>gi|194248074|ref|NP_034427.2| glycine receptor subunit alpha-4 precursor [Mus musculus]
gi|78099775|sp|Q61603.3|GLRA4_MOUSE RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
gi|70997254|gb|AAZ17380.1| glycine receptor alpha4 subunit [Mus musculus]
Length = 456
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 143
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 144 VTTDNKLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 109 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|149033178|gb|EDL87985.1| similar to Glycine receptor alpha-4 chain precursor (predicted)
[Rattus norvegicus]
Length = 416
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 45 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 103
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 104 VTTDNKLLRIFKNGNVLYSIRL 125
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 69 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 121
>gi|291223607|ref|XP_002731801.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 249
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y V +YL+ +W D+RL+H+ T+ + LN P + +W+P+VYF N K E+ VT N
Sbjct: 69 EYSVAIYLKMRWHDERLRHNG-TEPITLNSPEFIDVVWRPDVYFDNEKKGEYHKVTTDNR 127
Query: 82 LVRINPDGEILYMLSI 97
+ + +G+I Y L +
Sbjct: 128 ALELGSEGDITYGLRL 143
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 75 YVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAK 134
YV + + +N + + L + ++ R + + LN P + +W+P+VYF N K
Sbjct: 56 YVNSIHSVKEVNMEYSVAIYLKMRWHDERLRHNGTEPITLNSPEFIDVVWRPDVYFDNEK 115
Query: 135 HAEFQYVTVPNVLVRINPDGEILYML 160
E+ VT N + + +G+I Y L
Sbjct: 116 KGEYHKVTTDNRALELGSEGDITYGL 141
>gi|431899510|gb|ELK07476.1| Glycine receptor subunit alpha-4 [Pteropus alecto]
Length = 454
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|300793839|ref|NP_001178843.1| glycine receptor subunit alpha-4 precursor [Rattus norvegicus]
Length = 456
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 143
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 144 VTTDNKLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 109 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|26351769|dbj|BAC39521.1| unnamed protein product [Mus musculus]
Length = 343
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 143
Query: 76 VTVPNVLVRINPDGEILY 93
VT N L+RI +G +LY
Sbjct: 144 VTTDNKLLRIFKNGNVLY 161
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 109 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>gi|410989076|ref|XP_004000793.1| PREDICTED: glycine receptor subunit alpha-4 [Felis catus]
Length = 457
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYGEYPDDSLDL-DPSMLDSIWKPDLFFANEKGASFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLY 162
>gi|332225999|ref|XP_003262176.1| PREDICTED: glycine receptor subunit alpha-4 [Nomascus leucogenys]
Length = 342
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 83 SSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 141
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 142 FHEVTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|291408013|ref|XP_002720405.1| PREDICTED: glycine receptor, alpha 4 subunit-like [Oryctolagus
cuniculus]
Length = 457
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|71985004|ref|NP_509753.2| Protein LGC-41, isoform a [Caenorhabditis elegans]
gi|50507496|emb|CAA90332.3| Protein LGC-41, isoform a [Caenorhabditis elegans]
Length = 460
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
++VDLY+ WQD RL H+ + + +N+ + K IW P++YF NA+ A FQ VTVPN
Sbjct: 71 SFDVDLYVYMSWQDPRLAHN-FSDYVLINNDEIRKQIWLPDLYFANARQASFQEVTVPNF 129
Query: 82 LVRINPDGEILY 93
+ + PDG + Y
Sbjct: 130 NLFVAPDGTVAY 141
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+N+ + K IW P++YF NA+ A FQ VTVPN + + PDG + Y
Sbjct: 97 INNDEIRKQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVAY 141
>gi|74008431|ref|XP_549155.2| PREDICTED: glycine receptor subunit alpha-4 [Canis lupus
familiaris]
Length = 457
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYQEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|395860492|ref|XP_003802546.1| PREDICTED: glycine receptor subunit alpha-4 [Otolemur garnettii]
Length = 457
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|440906155|gb|ELR56457.1| Glycine receptor subunit alpha-4 [Bos grunniens mutus]
Length = 457
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|307611933|ref|NP_001182633.1| ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
gi|306448443|gb|ADM88004.1| ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
Length = 594
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL ++L L+ +++ IW+P+ YF N KH+ +TVPN
Sbjct: 184 DYSMDCYFRQYWRDTRLSFLGPIRSLSLS-IKMLERIWRPDTYFYNGKHSYAHTITVPNK 242
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ G+ILY + +
Sbjct: 243 LLRISQHGDILYSMRL 258
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IW+P+ YF N KH+ +TVPN L+RI+ G+ILY +
Sbjct: 215 MLERIWRPDTYFYNGKHSYAHTITVPNKLLRISQHGDILYSM 256
>gi|11890617|gb|AAG41141.1| glycine receptor alpha 1 subunit isoform a [Bos taurus]
Length = 457
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D R ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRXAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L RI+ +G +LY + I
Sbjct: 144 KLXRISRNGNVLYSIRI 160
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L RI+ +G +LY +
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLXRISRNGNVLYSI 158
>gi|449267576|gb|EMC78502.1| Glycine receptor subunit alpha-3, partial [Columba livia]
Length = 359
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
+DY V+++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F VT
Sbjct: 1 QDYRVNIFLRQNWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTD 59
Query: 80 NVLVRINPDGEILYMLSI 97
N L+RI +G +LY + +
Sbjct: 60 NKLLRIFKNGNVLYSIRL 77
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 27 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 73
>gi|118089348|ref|XP_001232995.1| PREDICTED: glycine receptor subunit alpha-4-like [Gallus gallus]
Length = 435
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 65 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 123
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 124 VTTDNKLLRIFKNGNVLYSIRL 145
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 89 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 141
>gi|311276712|ref|XP_003135319.1| PREDICTED: glycine receptor subunit alpha-4-like [Sus scrofa]
Length = 457
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|426257803|ref|XP_004022512.1| PREDICTED: glycine receptor subunit alpha-4 [Ovis aries]
Length = 457
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|338729463|ref|XP_001489094.3| PREDICTED: glycine receptor subunit alpha-4-like [Equus caballus]
Length = 457
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|11890616|gb|AAG41140.1| glycine receptor alpha 1 subunit isoform b [Bos taurus]
Length = 449
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D R ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRXAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L RI+ +G +LY + I
Sbjct: 144 KLXRISRNGNVLYSIRI 160
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F +T N L RI+ +G +LY +
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLXRISRNGNVLYSI 158
>gi|301621138|ref|XP_002939917.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 89 DYRVNIFLRQTWNDPRLSYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDN 147
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 148 KLLRIFKNGNVLYSIRL 164
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 114 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLY 160
>gi|288683407|ref|NP_001165756.1| glycine receptor subunit alpha-4 isoform 2 precursor [Homo sapiens]
Length = 342
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TKTTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|326919236|ref|XP_003205888.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like,
partial [Meleagris gallopavo]
Length = 453
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 89 PINMEYTIDIIFAQTWYDSRLKFNSSMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 147
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 148 TPNRLLRIWSDGRVLYTLRLTIN 170
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 110 KFNSSMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 165
>gi|348535804|ref|XP_003455388.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Oreochromis niloticus]
Length = 504
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++LRQ W D RL ++ KTL L D V +W P+ + NAK A F VTV N
Sbjct: 127 EYTMTVFLRQSWHDDRLSYNHTNKTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 185
Query: 82 LVRINPDGEILY 93
L+R+ P+G ILY
Sbjct: 186 LIRLQPNGVILY 197
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 100 NNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
N+TNK L L D V +W P+ + NAK A F VTV N L+R+ P+G ILY
Sbjct: 146 NHTNK------TLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILY 197
>gi|405970338|gb|EKC35252.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 404
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLK-HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
D+ VD+ RQ+W D+RLK +HS + L+L D +++ IW P+ +FP K AE VTVPN
Sbjct: 125 DFSVDIIFRQRWTDKRLKFNHSTVRILEL-DQKMIERIWVPDSFFPQEKRAEIHDVTVPN 183
Query: 81 VLVRINPDGEILYMLSI 97
L+ I +G + Y + I
Sbjct: 184 RLLHIYRNGTVFYSMRI 200
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D +++ IW P+ +FP K AE VTVPN L+ I +G + Y +
Sbjct: 154 DQKMIERIWVPDSFFPQEKRAEIHDVTVPNRLLHIYRNGTVFYSM 198
>gi|348571655|ref|XP_003471611.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Cavia
porcellus]
Length = 393
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|395546413|ref|XP_003775082.1| PREDICTED: glycine receptor subunit alpha-4 [Sarcophilus harrisii]
Length = 470
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 84 SSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 142
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 143 FHEVTTDNKLLRIFKNGSVLYSIRL 167
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 117 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGSVLY 163
>gi|334350526|ref|XP_001374501.2| PREDICTED: glycine receptor subunit alpha-4-like [Monodelphis
domestica]
Length = 387
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 84 SSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 142
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 143 FHEVTTDNKLLRIFKNGSVLYSIRL 167
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 117 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGSVLY 163
>gi|260822697|ref|XP_002606738.1| hypothetical protein BRAFLDRAFT_226176 [Branchiostoma floridae]
gi|229292082|gb|EEN62748.1| hypothetical protein BRAFLDRAFT_226176 [Branchiostoma floridae]
Length = 145
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + ++LRQ W+D RL++ K+L L D LV+ +W P+ + N+K + VTV N
Sbjct: 30 DYTITVFLRQYWRDNRLQYTGTNKSLSL-DGRLVEKLWVPDTFLVNSKSSFLHRVTVDNR 88
Query: 82 LVRINPDGEILYMLSI 97
L+RI P+G ILY + I
Sbjct: 89 LIRIEPNGNILYGMRI 104
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K+L L D LV+ +W P+ + N+K + VTV N L+RI P+G ILY +
Sbjct: 53 KSLSL-DGRLVEKLWVPDTFLVNSKSSFLHRVTVDNRLIRIEPNGNILYGM 102
>gi|118101018|ref|XP_001234041.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Gallus
gallus]
Length = 775
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDDRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRI 134
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|348537425|ref|XP_003456195.1| PREDICTED: glycine receptor subunit alpha-3-like [Oreochromis
niloticus]
Length = 455
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 55 TETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 113
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 114 VTTDNKLLRIFQNGNVLYSIRL 135
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 85 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLY 131
>gi|432116267|gb|ELK37310.1| Glutamate receptor 2, partial [Myotis davidii]
Length = 1521
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 72 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 131
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 132 NILLFIFRDGDVLVSMRL 149
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 103 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 144
>gi|395843741|ref|XP_003794632.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Otolemur garnettii]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|344279191|ref|XP_003411374.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Loxodonta africana]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|50746507|ref|XP_420527.1| PREDICTED: glycine receptor subunit alpha-3 [Gallus gallus]
Length = 463
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 106 DYRVNIFLRQNWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 164
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 165 KLLRIFKNGNVLYSIRL 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 131 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 177
>gi|293330282|dbj|BAJ04625.1| gamma-aminobutyric acid A receptor, gamma 1 [Coturnix japonica]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 44 PINMEYTIDIIFAQTWYDSRLKFNSSMKVLMLN-SNMVGKIWIPDTFFRNSRKSDAHWIT 102
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 103 TPNRLLRIWSDGRVLYTLRLTIN 125
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 65 KFNSSMKVLMLN-SNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 120
>gi|380786797|gb|AFE65274.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Macaca
mulatta]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|260827220|ref|XP_002608563.1| hypothetical protein BRAFLDRAFT_157776 [Branchiostoma floridae]
gi|229293914|gb|EEN64573.1| hypothetical protein BRAFLDRAFT_157776 [Branchiostoma floridae]
Length = 273
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+DY + ++LRQ W+D+RL +L L D L + +W P+ + PNAK + VTV N
Sbjct: 1 QDYTITVFLRQYWRDERLAFAGSNHSLSL-DGRLAEKLWVPDTFIPNAKESFLHKVTVDN 59
Query: 81 VLVRINPDGEILYML 95
L+R+ PDG ILY +
Sbjct: 60 KLIRLFPDGGILYGM 74
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L + +W P+ + PNAK + VTV N L+R+ PDG ILY +
Sbjct: 30 DGRLAEKLWVPDTFIPNAKESFLHKVTVDNKLIRLFPDGGILYGM 74
>gi|155372219|ref|NP_001094720.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Bos
taurus]
gi|151553969|gb|AAI49938.1| GABRG1 protein [Bos taurus]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|31742490|ref|NP_775807.2| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Homo
sapiens]
gi|114594945|ref|XP_526775.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 isoform
2 [Pan troglodytes]
gi|397490167|ref|XP_003816079.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Pan
paniscus]
gi|209572630|sp|Q8N1C3.2|GBRG1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-1;
AltName: Full=GABA(A) receptor subunit gamma-1; Flags:
Precursor
gi|57999453|emb|CAI45936.1| hypothetical protein [Homo sapiens]
gi|119613427|gb|EAW93021.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [Homo sapiens]
gi|193783776|dbj|BAG53758.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|426231653|ref|XP_004009853.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Ovis
aries]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|47222906|emb|CAF99062.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 89 DYTLTMYFQQAWRDKRLSYSEIAYNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 147
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPE 127
++R++PDG +LY L I +R LD + L W E
Sbjct: 148 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESWSLE 193
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 117 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 161
>gi|158260635|dbj|BAF82495.1| unnamed protein product [Homo sapiens]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|301614253|ref|XP_002936608.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like,
partial [Xenopus (Silurana) tropicalis]
Length = 369
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D+RL ++ KTL L D V+ +W P+ + NAK A F VTV N
Sbjct: 1 EYTMTVFLHQSWRDERLSYNHTNKTLGL-DSRFVEKLWLPDTFIVNAKSAWFHDVTVENK 59
Query: 82 LVRINPDGEILY 93
L+R+ PDG ILY
Sbjct: 60 LIRLQPDGVILY 71
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 100 NNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
N+TNK L L D V+ +W P+ + NAK A F VTV N L+R+ PDG ILY
Sbjct: 20 NHTNK------TLGL-DSRFVEKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 71
>gi|21411386|gb|AAH31087.1| Gamma-aminobutyric acid (GABA) A receptor, gamma 1 [Homo sapiens]
gi|123980146|gb|ABM81902.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [synthetic
construct]
gi|123994949|gb|ABM85076.1| gamma-aminobutyric acid (GABA) A receptor, gamma 1 [synthetic
construct]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|440908371|gb|ELR58393.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Bos grunniens
mutus]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|410957692|ref|XP_003985459.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Felis
catus]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|355749252|gb|EHH53651.1| GABA(A) receptor subunit gamma-1 [Macaca fascicularis]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|301772760|ref|XP_002921800.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Ailuropoda melanoleuca]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|149702782|ref|XP_001496252.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Equus caballus]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|297292520|ref|XP_002804107.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Macaca mulatta]
Length = 388
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|443689089|gb|ELT91578.1| hypothetical protein CAPTEDRAFT_4404 [Capitella teleta]
Length = 343
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++LRQ W D R+++ T + + + AIWKP+ +FPNAKHAE PN
Sbjct: 43 EYHMDIFLRQMWYDDRMRYRGATGPITFVG-STIDAIWKPDTFFPNAKHAEIHGGLSPNR 101
Query: 82 LVRINPDGEILYMLSI 97
L++ P+G +LY + +
Sbjct: 102 LLKGFPNGTVLYTVRL 117
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 120 VKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ AIWKP+ +FPNAKHAE PN L++ P+G +LY
Sbjct: 75 IDAIWKPDTFFPNAKHAEIHGGLSPNRLLKGFPNGTVLY 113
>gi|403284721|ref|XP_003933706.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Saimiri boliviensis boliviensis]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|402869278|ref|XP_003898690.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1 [Papio
anubis]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|332218612|ref|XP_003258448.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Nomascus leucogenys]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|327268587|ref|XP_003219078.1| PREDICTED: glycine receptor subunit alpha-3-like [Anolis
carolinensis]
Length = 462
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 101 DYRVNIFLRQNWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 159
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 160 KLLRIFKNGNVLYSIRL 176
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 126 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 172
>gi|359321100|ref|XP_003639504.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Canis lupus familiaris]
Length = 465
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|14041786|emb|CAC38838.1| glycine receptor alphaZ4 subunit [Danio rerio]
Length = 426
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 19 TETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 77
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 78 VTTDNKLLRIFQNGNVLYSIRL 99
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY +
Sbjct: 49 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSI 97
>gi|344299218|ref|XP_003421284.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon-like
[Loxodonta africana]
Length = 586
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D+ Q W D+RL+++ +TL LN N+V +W P+ +F N+K + VT+PN
Sbjct: 207 EYNIDIIFCQTWYDERLRYNDSFETLVLNS-NVVSQLWIPDTFFRNSKRTQEHTVTMPNQ 265
Query: 82 LVRINPDGEILYMLSI 97
L+RI+ DG++LY + +
Sbjct: 266 LIRIHRDGKVLYTIRM 281
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ N+V +W P+ +F N+K + VT+PN L+RI+ DG++LY +
Sbjct: 235 NSNVVSQLWIPDTFFRNSKRTQEHTVTMPNQLIRIHRDGKVLYTI 279
>gi|410915546|ref|XP_003971248.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 460
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 55 TETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 113
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 114 VTTDNKLLRIFQNGNVLYSIRL 135
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 85 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLY 131
>gi|426344234|ref|XP_004038679.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Gorilla gorilla gorilla]
Length = 443
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 82 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 140
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 141 TPNRLLRIWNDGRVLYTLRLTIN 163
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 103 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 158
>gi|149642619|ref|NP_001092519.1| glycine receptor subunit alpha-4 precursor [Bos taurus]
gi|148744917|gb|AAI42202.1| MGC139528 protein [Bos taurus]
gi|296470974|tpg|DAA13089.1| TPA: hypothetical protein LOC531678 [Bos taurus]
Length = 342
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|350587477|ref|XP_003129000.3| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like,
partial [Sus scrofa]
Length = 430
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 69 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 127
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 128 TPNRLLRIWNDGRVLYTLRLTIN 150
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 90 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 145
>gi|281342940|gb|EFB18524.1| hypothetical protein PANDA_010715 [Ailuropoda melanoleuca]
Length = 430
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 69 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 127
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 128 TPNRLLRIWNDGRVLYTLRLTIN 150
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 90 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 145
>gi|156405784|ref|XP_001640911.1| predicted protein [Nematostella vectensis]
gi|156228048|gb|EDO48848.1| predicted protein [Nematostella vectensis]
Length = 272
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 19 AIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
+++DY +D++LRQ W D+RL H + T+ L++ ++ IW P+ YF NAK F VT
Sbjct: 4 SLQDYTLDIFLRQSWVDERLSH-DLNTTMFLSN-TVMDKIWLPDSYFVNAKQGSFHKVTK 61
Query: 79 PNVLVRINPDGEILY 93
N++V I PDG++ Y
Sbjct: 62 DNMMVMIQPDGQVQY 76
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 108 KRKALDLNDP-----NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+R + DLN ++ IW P+ YF NAK F VT N++V I PDG++ Y
Sbjct: 21 ERLSHDLNTTMFLSNTVMDKIWLPDSYFVNAKQGSFHKVTKDNMMVMIQPDGQVQY 76
>gi|194389540|dbj|BAG61731.1| unnamed protein product [Homo sapiens]
Length = 419
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|307183282|gb|EFN70151.1| Gamma-aminobutyric acid receptor alpha-like [Camponotus floridanus]
Length = 488
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L K IWKP+ YF N KH+ +T PN
Sbjct: 66 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAK-IWKPDTYFYNGKHSYLHTITSPNKF 124
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 125 VRLYQDGRVLY 135
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N KH+ +T PN VR+ DG +LY
Sbjct: 95 SMLAKIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 135
>gi|449500541|ref|XP_002188642.2| PREDICTED: glycine receptor subunit alpha-3 [Taeniopygia guttata]
Length = 434
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 69 DYRVNIFLRQNWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 127
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 128 KLLRIFKNGNVLYSIRL 144
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 94 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 140
>gi|432936632|ref|XP_004082202.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 1 [Oryzias latipes]
Length = 479
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLSFSSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 160 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSL 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|410928192|ref|XP_003977485.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Takifugu rubripes]
Length = 441
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLSFRSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD L
Sbjct: 160 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDTQTCTL 197
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R K++ D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 119 RSSTNKSMTF-DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|281342623|gb|EFB18207.1| hypothetical protein PANDA_015554 [Ailuropoda melanoleuca]
Length = 397
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 66 TETTMDYRVNVFLRQQWNDPRLAYLEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 124
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 125 VTTDNKLLRIFKNGNVLYSIRL 146
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 96 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 142
>gi|260835282|ref|XP_002612638.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
gi|229298016|gb|EEN68647.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
Length = 390
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY ++++ RQ+W D RL +TL L D ++V IW P+V+F N K A F VT N
Sbjct: 38 DYIINVFFRQRWNDPRLSFKQFNETLTL-DASVVGKIWVPDVFFVNEKGANFHDVTTANR 96
Query: 82 LVRINPDGEILY 93
++R++P G ILY
Sbjct: 97 MLRVDPTGTILY 108
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 106 KQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
KQ + L L D ++V IW P+V+F N K A F VT N ++R++P G ILY
Sbjct: 57 KQFNETLTL-DASVVGKIWVPDVFFVNEKGANFHDVTTANRMLRVDPTGTILY 108
>gi|313240835|emb|CBY33125.1| unnamed protein product [Oikopleura dioica]
Length = 428
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
++ VD++LRQKW+D RL + S+ +K+ DL++ ++ IW P+ +F N K + +T+P
Sbjct: 60 REFTVDMFLRQKWKDPRLAYQSVMSKSGDLSNV-MINRIWTPDAFFRNGKKSVNHNMTLP 118
Query: 80 NVLVRINPDGEILY 93
N L+RIN G+ILY
Sbjct: 119 NRLLRINATGDILY 132
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K+ DL++ ++ IW P+ +F N K + +T+PN L+RIN G+ILY
Sbjct: 85 KSGDLSNV-MINRIWTPDAFFRNGKKSVNHNMTLPNRLLRINATGDILY 132
>gi|4336684|gb|AAD17893.1| gamma-aminobutyric-acid receptor rho-2A subunit precursor [Morone
americana]
Length = 479
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLSFTSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 160 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSL 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|444718318|gb|ELW59132.1| Gamma-aminobutyric acid receptor subunit rho-1 [Tupaia chinensis]
Length = 414
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSANNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL-VKAIWKPEVY--FPNAKHAEF 138
++R+ PDG +LY L + R LD +L +++ W +Y F +H F
Sbjct: 160 MLRVQPDGTVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESCWYNRLYINFTLRRHIFF 219
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGTVLYSL 173
>gi|348543733|ref|XP_003459337.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oreochromis niloticus]
Length = 480
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLSFTSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 160 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSL 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|326913085|ref|XP_003202872.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Meleagris gallopavo]
Length = 433
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D L+K IW P+V+F ++K + TV NV
Sbjct: 68 DFTMTLYLRHYWKDERLSFRSTKNKSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENV 127
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +L+ L I + R LD + +L
Sbjct: 128 MLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 165
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R K K++ D L+K IW P+V+F ++K + TV NV++R+ PDG +L+ L
Sbjct: 87 RSTKNKSMTF-DGRLIKKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLFSL 141
>gi|395857174|ref|XP_003800981.1| PREDICTED: gamma-aminobutyric acid receptor subunit epsilon
[Otolemur garnettii]
Length = 510
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D+ Q W D+RL+++ +TL LN N+V +W P+ +F N+K + +T+PN
Sbjct: 115 EYTIDIIFYQTWYDERLRYNDTFETLVLNG-NMVSQLWIPDTFFRNSKRTQEHEITMPNQ 173
Query: 82 LVRINPDGEILYMLSI 97
+VRI+ DG++LY + +
Sbjct: 174 MVRIHKDGKVLYTIRM 189
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
N+V +W P+ +F N+K + +T+PN +VRI+ DG++LY +
Sbjct: 145 NMVSQLWIPDTFFRNSKRTQEHEITMPNQMVRIHKDGKVLYTI 187
>gi|194208149|ref|XP_001495300.2| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Equus caballus]
Length = 546
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 178 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 236
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 237 LIRLQPDGVILYSIRI 252
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 206 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 250
>gi|363728585|ref|XP_428531.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Gallus gallus]
Length = 461
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D L+K IW P+V+F ++K + TV NV
Sbjct: 96 DFTMTLYLRHYWKDERLSFRSTKNKSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENV 155
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +L+ L I + R LD + +L
Sbjct: 156 MLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 193
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R K K++ D L+K IW P+V+F ++K + TV NV++R+ PDG +L+ L
Sbjct: 115 RSTKNKSMTF-DGRLIKKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLFSL 169
>gi|47222786|emb|CAG01753.1| unnamed protein product [Tetraodon nigroviridis]
Length = 481
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++LRQ W D RL ++ KTL L D V +W P+ + NAK A F VTV N
Sbjct: 72 EYTMTVFLRQSWHDDRLSYNHTNKTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 130
Query: 82 LVRINPDGEILY 93
L+R+ P+G ILY
Sbjct: 131 LIRLQPNGVILY 142
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 100 NNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
N+TNK L L D V +W P+ + NAK A F VTV N L+R+ P+G ILY
Sbjct: 91 NHTNK------TLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILY 142
>gi|60416032|gb|AAH90676.1| Glra4a protein [Danio rerio]
gi|262478805|gb|ACY68416.1| glycine receptor alpha 4a subunit [Danio rerio]
Length = 457
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRLNVFLRQQWNDPRLAYSEYPDASLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFQNGNVLYSIRL 166
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLY 162
>gi|395843984|ref|XP_003794750.1| PREDICTED: glycine receptor subunit beta [Otolemur garnettii]
Length = 480
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 20 IEDYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
+DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 81 FQDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVT 140
Query: 78 VPNVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 141 QENILLFIFRDGDVL 155
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 114 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 155
>gi|110555510|gb|ABG75735.1| GABA-gated ion channel [Apis mellifera]
Length = 463
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L + IWKP+ YF N KH+ +T PN
Sbjct: 51 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAR-IWKPDTYFYNGKHSYLHTITSPNKF 109
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 110 VRLYQDGRVLY 120
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N KH+ +T PN VR+ DG +LY
Sbjct: 80 SMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 120
>gi|313224230|emb|CBY20019.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
++ VD++LRQKW+D RL + S+ +K+ DL++ ++ IW P+ +F N K + +T+PN
Sbjct: 61 EFTVDMFLRQKWKDPRLAYQSVMSKSGDLSNV-MINRIWTPDAFFRNGKKSVNHNMTLPN 119
Query: 81 VLVRINPDGEILY 93
L+RIN G+ILY
Sbjct: 120 RLLRINATGDILY 132
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
++ IW P+ +F N K + +T+PN L+RIN G+ILY
Sbjct: 93 MINRIWTPDAFFRNGKKSVNHNMTLPNRLLRINATGDILY 132
>gi|47215100|emb|CAF98174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 445
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 65 DFTMTLYLRHYWKDERLSFRSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 124
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R+ PDG +LY L + R LD
Sbjct: 125 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLD 156
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R K++ D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 84 RSSTNKSMTF-DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 138
>gi|307206610|gb|EFN84592.1| Gamma-aminobutyric acid receptor alpha-like [Harpegnathos saltator]
Length = 227
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL S +TL L+ L + IWKP+ YF N K++ +T PN
Sbjct: 87 YSMDCYFRQSWVDRRLAFQSGKETLALSISMLAR-IWKPDTYFYNGKYSYLHTITSPNKF 145
Query: 83 VRINPDGEILYMLS 96
VR+ DG +LY S
Sbjct: 146 VRLYQDGRVLYSSS 159
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K++ +T PN VR+ DG +LY
Sbjct: 116 SMLARIWKPDTYFYNGKYSYLHTITSPNKFVRLYQDGRVLY 156
>gi|301781106|ref|XP_002925968.1| PREDICTED: glycine receptor subunit alpha-4-like [Ailuropoda
melanoleuca]
Length = 457
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNVFLRQQWNDPRLAYLEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 145 VTTDNKLLRIFKNGNVLYSIRL 166
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>gi|301623311|ref|XP_002940962.1| PREDICTED: glycine receptor subunit alpha-1-like, partial [Xenopus
(Silurana) tropicalis]
Length = 354
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 86 DYRLNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEITTDN 144
Query: 81 VLVRINPDGEILY 93
L+RI +G +LY
Sbjct: 145 KLLRIFKNGNVLY 157
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI +G +LY
Sbjct: 111 SLDL-DPSMLDSIWKPDLFFANEKGANFHEITTDNKLLRIFKNGNVLY 157
>gi|18858761|ref|NP_571857.1| glycine receptor subunit alpha-4 [Danio rerio]
gi|11322384|emb|CAC16687.1| glycine receptor alphaZ2 subunit [Danio rerio]
Length = 456
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY ++++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRLNVFLRQQWNDPRLAYSEYPDASLDL-DPSMLDSIWKPDLFFANEKGANFHE 143
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 144 VTTDNKLLRIFQNGNVLYSIRL 165
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLY 161
>gi|344253840|gb|EGW09944.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Cricetulus
griseus]
Length = 152
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 56 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 114
Query: 78 VPNVLVRINPDGEILYML 95
PN L+RI DG +LY L
Sbjct: 115 TPNRLLRIWSDGRVLYTL 132
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 77 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 132
>gi|17865325|ref|NP_445748.1| glycine receptor subunit beta precursor [Rattus norvegicus]
gi|121604|sp|P20781.1|GLRB_RAT RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|13548665|emb|CAC35983.1| glycine receptor beta precursor [Rattus norvegicus]
gi|149048282|gb|EDM00858.1| glycine receptor, beta subunit [Rattus norvegicus]
Length = 496
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|260790997|ref|XP_002590527.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
gi|229275721|gb|EEN46538.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
Length = 347
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V +YLRQ WQD RL + KT+ L D N+ IW P+++F N K + +T N
Sbjct: 28 DYTVGIYLRQFWQDPRLVFEGLNKTISL-DSNIRPKIWVPDLFFVNEKDGKMHAITTANK 86
Query: 82 LVRINPDGEILYMLSI 97
+RI+P+G +LY + +
Sbjct: 87 YIRIHPNGTVLYSMRL 102
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D N+ IW P+++F N K + +T N +RI+P+G +LY +
Sbjct: 56 DSNIRPKIWVPDLFFVNEKDGKMHAITTANKYIRIHPNGTVLYSM 100
>gi|291416480|ref|XP_002724475.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, delta,
partial [Oryctolagus cuniculus]
Length = 434
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ ++TL L D V +W P+ + NAK A F VTV N
Sbjct: 61 EYTMTVFLHQSWRDSRLSYNHTSETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 119
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG +LY + I
Sbjct: 120 LIRLQPDGVVLYSIRITST 138
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG +LY +
Sbjct: 89 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVVLYSI 133
>gi|149638872|ref|XP_001510986.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Ornithorhynchus anatinus]
Length = 473
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+DQRL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDQRLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGQVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGQVLYSL 185
>gi|431922679|gb|ELK19599.1| Gamma-aminobutyric acid receptor subunit delta [Pteropus alecto]
Length = 495
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 161 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 219
Query: 82 LVRINPDGEILYML 95
L+R+ PDG ILY +
Sbjct: 220 LIRLQPDGVILYSI 233
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 189 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 233
>gi|410899000|ref|XP_003962985.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Takifugu rubripes]
Length = 461
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++LRQ W D RL ++ KTL L D V +W P+ + NAK A F VTV N
Sbjct: 85 EYTMTVFLRQSWHDDRLSYNHTNKTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 143
Query: 82 LVRINPDGEILY 93
L+R+ P+G ILY
Sbjct: 144 LIRLQPNGVILY 155
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K L L D V +W P+ + NAK A F VTV N L+R+ P+G ILY
Sbjct: 108 KTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILY 155
>gi|444515637|gb|ELV10941.1| Gamma-aminobutyric acid receptor subunit epsilon [Tupaia chinensis]
Length = 283
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D+ Q W D+RL+++ +TL LN NLV +W P+ +F N+K + +T+PN
Sbjct: 115 EYTIDIIFCQTWYDERLRYNDTFETLVLNG-NLVSQLWIPDTFFRNSKRTQEHEITMPNQ 173
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEV 128
+VRI+ DG++LY + + + R +D + L + W V
Sbjct: 174 MVRIHKDGKVLYTIRMTIDAGCSLHLLRFPMDSHSCPLSFSSWITSV 220
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
NLV +W P+ +F N+K + +T+PN +VRI+ DG++LY +
Sbjct: 145 NLVSQLWIPDTFFRNSKRTQEHEITMPNQMVRIHKDGKVLYTI 187
>gi|432954882|ref|XP_004085578.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like,
partial [Oryzias latipes]
Length = 354
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++LRQ W D RL ++ KTL L D V +W P+ + NAK A F VTV N
Sbjct: 85 EYTMTIFLRQSWHDDRLSYNHTNKTLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 143
Query: 82 LVRINPDGEILY 93
L+R+ P+G ILY
Sbjct: 144 LIRLQPNGVILY 155
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 100 NNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
N+TNK L L D V +W P+ + NAK A F VTV N L+R+ P+G ILY
Sbjct: 104 NHTNK------TLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILY 155
>gi|387542806|gb|AFJ72030.1| gamma-aminobutyric acid receptor subunit delta precursor [Macaca
mulatta]
Length = 454
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|31981754|ref|NP_034428.2| glycine receptor subunit beta precursor [Mus musculus]
gi|341940753|sp|P48168.2|GLRB_MOUSE RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|26350383|dbj|BAC38831.1| unnamed protein product [Mus musculus]
gi|54887332|gb|AAH37605.1| Glycine receptor, beta subunit [Mus musculus]
gi|148683498|gb|EDL15445.1| glycine receptor, beta subunit, isoform CRA_a [Mus musculus]
Length = 496
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|402852664|ref|XP_003891036.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Papio
anubis]
Length = 454
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|355557459|gb|EHH14239.1| hypothetical protein EGK_00127 [Macaca mulatta]
Length = 475
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRITST 137
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|508235|gb|AAA61874.1| glycine receptor beta subunit precursor [Mus musculus]
Length = 496
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|2388693|gb|AAB70007.1| GABA-A receptor delta subunit [Homo sapiens]
Length = 452
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|34734071|ref|NP_000806.2| gamma-aminobutyric acid receptor subunit delta precursor [Homo
sapiens]
gi|59802571|sp|O14764.2|GBRD_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit delta;
AltName: Full=GABA(A) receptor subunit delta; Flags:
Precursor
gi|21707470|gb|AAH33801.1| Gamma-aminobutyric acid (GABA) A receptor, delta [Homo sapiens]
gi|123982470|gb|ABM82976.1| gamma-aminobutyric acid (GABA) A receptor, delta [synthetic
construct]
gi|168277880|dbj|BAG10918.1| gamma-aminobutyric-acid receptor subunit delta precursor [synthetic
construct]
Length = 452
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|403297709|ref|XP_003939695.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Saimiri
boliviensis boliviensis]
Length = 430
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRITST 137
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|158255158|dbj|BAF83550.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|297666681|ref|XP_002811644.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Pongo
abelii]
Length = 428
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRITST 137
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|363732127|ref|XP_419839.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Gallus
gallus]
Length = 488
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 121 DFTMTLYLRHYWKDERLSFPSTTNNSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 180
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 181 MLRVFPDGHVLYSMRI 196
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 150 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSM 194
>gi|332261398|ref|XP_003279759.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit delta [Nomascus leucogenys]
Length = 428
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRITST 137
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|114550671|ref|XP_001156161.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Pan
troglodytes]
gi|397471538|ref|XP_003807346.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Pan
paniscus]
gi|426327485|ref|XP_004024548.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Gorilla
gorilla gorilla]
gi|119576541|gb|EAW56137.1| gamma-aminobutyric acid (GABA) A receptor, delta [Homo sapiens]
Length = 428
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRITST 137
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|344243736|gb|EGV99839.1| Gamma-aminobutyric acid receptor subunit beta-2 [Cricetulus
griseus]
Length = 338
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 19 AIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
A +DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV
Sbjct: 30 AFKDYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTV 88
Query: 79 PNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
N ++R++PDG +LY L I +R LD + L
Sbjct: 89 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 129
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 61 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 105
>gi|296206511|ref|XP_002750247.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Callithrix jacchus]
Length = 430
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRITST 137
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|148683054|gb|EDL15001.1| gamma-aminobutyric acid (GABA-A) receptor, subunit delta, isoform
CRA_a [Mus musculus]
Length = 274
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 112 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 170
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 171 LIRLQPDGVILYSIRI 186
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 140 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 184
>gi|440911706|gb|ELR61343.1| Gamma-aminobutyric acid receptor subunit delta, partial [Bos
grunniens mutus]
Length = 430
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 63 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 121
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 122 LIRLQPDGVILYSIRI 137
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 91 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 135
>gi|126165262|ref|NP_001075184.1| gamma-aminobutyric acid receptor subunit delta precursor [Bos
taurus]
gi|126010643|gb|AAI33558.1| Gamma-aminobutyric acid (GABA) A receptor, delta [Bos taurus]
gi|296478976|tpg|DAA21091.1| TPA: gamma-aminobutyric acid (GABA) A receptor, delta [Bos taurus]
Length = 450
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 83 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 141
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 142 LIRLQPDGVILYSIRI 157
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 111 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 155
>gi|557655|emb|CAA57076.1| glycine receptor beta subunit [Mus musculus]
Length = 484
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 88 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 147
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 148 NILLFIFRDGDVLVSMRL 165
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 119 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 160
>gi|4336688|gb|AAD17895.1| gamma-aminobutyric-acid receptor rho-1B subunit precursor [Morone
americana]
Length = 466
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+++F ++K + T NV
Sbjct: 107 DFTMTLYLRHYWKDERLSFRSNTNQSMTFDSRLVKKIWVPDMFFVHSKKSFTHDTTTDNV 166
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 167 MLRVYPDGKVLYSLRVTVTAMCSMDLSRFPLDTQTCSL 204
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 136 DSRLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVLYSL 180
>gi|345328452|ref|XP_001514286.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Ornithorhynchus anatinus]
Length = 597
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 188 DYTITMYFQQSWRDKRLAYNDIALNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 246
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 247 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 284
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 111 ALDLN-DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
AL+L D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 210 ALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 260
>gi|395840823|ref|XP_003793251.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Otolemur
garnettii]
Length = 451
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|296478670|tpg|DAA20785.1| TPA: glycine receptor subunit beta precursor [Bos taurus]
Length = 440
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|119709419|emb|CAM06613.1| glycine receptor beta subunit [Mus musculus]
Length = 445
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|431901239|gb|ELK08305.1| Glycine receptor subunit beta [Pteropus alecto]
Length = 498
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 101 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 160
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 161 NILLFIFRDGDVLVSMRL 178
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 132 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 173
>gi|354494412|ref|XP_003509331.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Cricetulus griseus]
gi|344244238|gb|EGW00342.1| Gamma-aminobutyric acid receptor subunit delta [Cricetulus griseus]
Length = 425
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRI 134
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|410966112|ref|XP_003989580.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta, partial
[Felis catus]
Length = 439
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 71 EYTMTVFLHQSWRDSRLAYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 129
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 130 LIRLQPDGVILYSIRITST 148
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 99 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 143
>gi|197101015|ref|NP_001125835.1| glycine receptor subunit beta precursor [Pongo abelii]
gi|55729386|emb|CAH91425.1| hypothetical protein [Pongo abelii]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|432936634|ref|XP_004082203.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 2 [Oryzias latipes]
Length = 481
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLSFSSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY L +
Sbjct: 160 MLRVFPDGHVLYSLRV 175
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|426247131|ref|XP_004017340.1| PREDICTED: glycine receptor subunit beta [Ovis aries]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|149698123|ref|XP_001500672.1| PREDICTED: glycine receptor subunit beta [Equus caballus]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|253880|gb|AAB22967.1| GABAA receptor delta subunit [Mus sp.]
Length = 449
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRI 158
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|341893310|gb|EGT49245.1| CBN-LGC-45 protein [Caenorhabditis brenneri]
Length = 911
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 19 AIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
A+ DY++D+YL W+D RL + K + + + ++++ IW+P+ +F NAK AEF VT
Sbjct: 583 AVVDYDMDIYLMMSWRDARLVN-PYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTF 641
Query: 79 PNVLVRINPDGEILY 93
N L+RI PDG +LY
Sbjct: 642 LNFLMRIFPDGLVLY 656
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ + ++++ IW+P+ +F NAK AEF VT N L+RI PDG +LY
Sbjct: 612 VKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLY 656
>gi|27806605|ref|NP_776496.1| glycine receptor subunit beta precursor [Bos taurus]
gi|75067361|sp|Q9GJS9.1|GLRB_BOVIN RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|10180961|gb|AAG14347.1|AF268376_1 glycine receptor beta subunit [Bos taurus]
gi|10180957|gb|AAG14345.1| glycine receptor beta subunit [Bos taurus]
gi|115305328|gb|AAI23492.1| Glycine receptor, beta [Bos taurus]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|348551538|ref|XP_003461587.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Cavia porcellus]
Length = 450
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSVRITST 161
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D V +W P+ + NAK A F VTV N L+R+ PDG ILY
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 154
>gi|440904115|gb|ELR54674.1| Glycine receptor subunit beta [Bos grunniens mutus]
Length = 499
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 102 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 161
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 162 NILLFIFRDGDVL 174
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 133 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 174
>gi|345327584|ref|XP_001513550.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLSFPSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSM 170
>gi|160707923|ref|NP_032098.2| gamma-aminobutyric acid receptor subunit delta precursor [Mus
musculus]
gi|120792|sp|P22933.1|GBRD_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit delta;
AltName: Full=GABA(A) receptor subunit delta; Flags:
Precursor
gi|193402|gb|AAA37652.1| GABA-alpha receptor delta-subunit [Mus musculus]
gi|109733707|gb|AAI16833.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit delta [Mus
musculus]
gi|109734118|gb|AAI16837.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit delta [Mus
musculus]
gi|148683055|gb|EDL15002.1| gamma-aminobutyric acid (GABA-A) receptor, subunit delta, isoform
CRA_b [Mus musculus]
Length = 449
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRI 158
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|312376311|gb|EFR23436.1| hypothetical protein AND_12871 [Anopheles darlingi]
Length = 170
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFP 66
Q + S CT Y +D Y RQ W D+RL TL L+ +++ IWKP+ YF
Sbjct: 37 QSSPMSTSSCT-----YSMDCYFRQSWVDRRLAFSGAQDTLALS-ISMLGRIWKPDTYFY 90
Query: 67 NAKHAEFQYVTVPNVLVRINPDGEILY 93
N K + +T PN VR+ DG +LY
Sbjct: 91 NGKQSYLHTITTPNKFVRLYQDGRVLY 117
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VR+ DG +LY
Sbjct: 77 SMLGRIWKPDTYFYNGKQSYLHTITTPNKFVRLYQDGRVLY 117
>gi|308495864|ref|XP_003110120.1| CRE-LGC-45 protein [Caenorhabditis remanei]
gi|308244957|gb|EFO88909.1| CRE-LGC-45 protein [Caenorhabditis remanei]
Length = 1073
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY++D+YL W+D RL + K + + + ++++ IW+P+ +F NAK AEF VT N
Sbjct: 748 DYDMDIYLMMSWRDARLVN-PYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNF 806
Query: 82 LVRINPDGEILY 93
L+RI PDG +LY
Sbjct: 807 LMRIFPDGLVLY 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K + + + ++++ IW+P+ +F NAK AEF VT N L+RI PDG +LY
Sbjct: 770 KPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLY 818
>gi|8393393|ref|NP_058985.1| gamma-aminobutyric acid receptor subunit delta precursor [Rattus
norvegicus]
gi|544363|sp|P18506.2|GBRD_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit delta;
AltName: Full=GABA(A) receptor subunit delta; Flags:
Precursor
gi|204208|gb|AAA41182.1| GABA-A receptor delta subunit [Rattus norvegicus]
gi|204216|gb|AAC42035.1| GABA-A receptor delta-subunit [Rattus norvegicus]
gi|56585218|gb|AAH87714.1| Gamma-aminobutyric acid (GABA) A receptor, delta [Rattus
norvegicus]
gi|149024799|gb|EDL81296.1| gamma-aminobutyric acid A receptor, delta [Rattus norvegicus]
Length = 449
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRI 158
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|354476099|ref|XP_003500262.1| PREDICTED: glycine receptor subunit beta-like isoform 2 [Cricetulus
griseus]
Length = 446
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|348555086|ref|XP_003463355.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Cavia porcellus]
Length = 491
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 50/85 (58%)
Query: 13 RSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
+S+C D+ + YLR W+D+RL S T D L++ IW P+++F ++K +
Sbjct: 117 KSICESLYLDFTMTFYLRHYWKDERLSFPSTTNKSMTFDHRLIEKIWVPDIFFVHSKRSF 176
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
T+ N+++R++PDG +L+ L +
Sbjct: 177 IHDTTMGNIMLRVHPDGNVLFSLRV 201
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L++ IW P+++F ++K + T+ N+++R++PDG +L+ L
Sbjct: 155 DHRLIEKIWVPDIFFVHSKRSFIHDTTMGNIMLRVHPDGNVLFSL 199
>gi|260812521|ref|XP_002600969.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
gi|229286259|gb|EEN56981.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
Length = 380
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 5 AAQKELVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKA 57
A ++G S+ +I+ DY + +Y +Q W+D RL + S+ L L D + ++
Sbjct: 46 AGDPLVIGMSIEIASIDSISEVNMDYTMTMYFQQTWRDPRLSYTSVPHNLTL-DGRVAES 104
Query: 58 IWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDP 117
IW P+ YF N K + VTV N ++R++ DG +LY L I + +R LD +
Sbjct: 105 IWVPDTYFLNDKESYLHGVTVKNRMLRLHHDGSVLYGLRITTTAACQMNLRRYPLDEQNC 164
Query: 118 NL 119
L
Sbjct: 165 TL 166
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + ++IW P+ YF N K + VTV N ++R++ DG +LY L
Sbjct: 98 DGRVAESIWVPDTYFLNDKESYLHGVTVKNRMLRLHHDGSVLYGL 142
>gi|47219404|emb|CAG01567.1| unnamed protein product [Tetraodon nigroviridis]
Length = 451
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 10 LVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPE 62
+VG S+ +I+ DY + +Y +Q W+D+RL + + L L D + +W P+
Sbjct: 38 IVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTL-DNRVADQLWLPD 96
Query: 63 VYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 97 TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 147
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 85 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 129
>gi|344282993|ref|XP_003413257.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Loxodonta africana]
Length = 726
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL + +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTIFLHQSWRDSRLSYSHTNETLGL-DSRFVDRLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY I
Sbjct: 143 LIRLQPDGVILYSTRI 158
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D V +W P+ + NAK A F VTV N L+R+ PDG ILY
Sbjct: 112 DSRFVDRLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 154
>gi|449265554|gb|EMC76734.1| Gamma-aminobutyric acid receptor subunit rho-2 [Columba livia]
Length = 464
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLSFPSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSM 170
>gi|432941133|ref|XP_004082821.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Oryzias latipes]
Length = 448
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D++ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 86 PINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 144
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+R+ +G ++Y L + N
Sbjct: 145 TPNRLLRLWSNGRVMYTLRLTIN 167
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+R+ +G ++Y L
Sbjct: 107 KFNSSMKLLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTL 162
>gi|326677883|ref|XP_694878.5| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4, partial
[Danio rerio]
Length = 455
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 10 LVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPE 62
+VG S+ +I+ DY + +Y +Q W+D+RL + + L L D + +W P+
Sbjct: 36 IVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYAEMALNLTL-DNRVADQLWLPD 94
Query: 63 VYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 95 TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 145
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 111 ALDLN-DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
AL+L D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 77 ALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 127
>gi|55733419|emb|CAH93390.1| hypothetical protein [Pongo abelii]
Length = 472
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 75 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 134
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 135 NILLFIFRDGDVL 147
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 106 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 147
>gi|382928889|gb|AFG29910.1| glutamate-gated chloride channel 5, partial [Tetranychus urticae]
Length = 444
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSIT---KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
+Y + R++W+D RL ++ + + L L DPN IWKP+++F N K F + +
Sbjct: 50 EYSAQITFREQWRDDRLAYNDMVGQIRYLTLTDPN---RIWKPDLFFRNEKEGHFHDIIM 106
Query: 79 PNVLVRINPDGEILYMLSI 97
PNVL+RI P+GE+LY + I
Sbjct: 107 PNVLLRIYPNGEVLYSIRI 125
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ L L DPN IWKP+++F N K F + +PNVL+RI P+GE+LY +
Sbjct: 76 RYLTLTDPN---RIWKPDLFFRNEKEGHFHDIIMPNVLLRIYPNGEVLYSI 123
>gi|281341914|gb|EFB17498.1| hypothetical protein PANDA_007936 [Ailuropoda melanoleuca]
Length = 458
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 61 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 120
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 121 NILLFIFRDGDVL 133
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 92 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 133
>gi|351707353|gb|EHB10272.1| Glycine receptor subunit beta [Heterocephalus glaber]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|344293674|ref|XP_003418546.1| PREDICTED: glycine receptor subunit beta [Loxodonta africana]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|301622061|ref|XP_002940361.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 124 DFTMTLYLRHYWKDERLSFPSSTNKSMTFDSRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 183
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 184 MLRVYPDGHVLYSMRI 199
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 153 DSRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVYPDGHVLYSM 197
>gi|17225419|gb|AAL37392.1|AF326546_1 gamma-aminobutyric acid receptor, subunit delta [Mus musculus]
gi|17225455|gb|AAL37410.1|AF326564_1 gamma-aminobutyric acid receptor, subunit delta [Mus musculus]
Length = 449
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRI 158
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|432947228|ref|XP_004083955.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oryzias latipes]
Length = 473
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLAFPSATNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD L
Sbjct: 160 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTL 197
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|388454629|ref|NP_001253381.1| glycine receptor subunit beta precursor [Macaca mulatta]
gi|55623408|ref|XP_517504.1| PREDICTED: glycine receptor subunit beta isoform 4 [Pan
troglodytes]
gi|114596543|ref|XP_001141152.1| PREDICTED: glycine receptor subunit beta isoform 3 [Pan
troglodytes]
gi|332217581|ref|XP_003257937.1| PREDICTED: glycine receptor subunit beta isoform 1 [Nomascus
leucogenys]
gi|332217585|ref|XP_003257939.1| PREDICTED: glycine receptor subunit beta isoform 3 [Nomascus
leucogenys]
gi|397504012|ref|XP_003822604.1| PREDICTED: glycine receptor subunit beta isoform 1 [Pan paniscus]
gi|397504014|ref|XP_003822605.1| PREDICTED: glycine receptor subunit beta isoform 2 [Pan paniscus]
gi|402870713|ref|XP_003899350.1| PREDICTED: glycine receptor subunit beta isoform 1 [Papio anubis]
gi|402870715|ref|XP_003899351.1| PREDICTED: glycine receptor subunit beta isoform 2 [Papio anubis]
gi|426345836|ref|XP_004040604.1| PREDICTED: glycine receptor subunit beta isoform 1 [Gorilla gorilla
gorilla]
gi|426345840|ref|XP_004040606.1| PREDICTED: glycine receptor subunit beta isoform 3 [Gorilla gorilla
gorilla]
gi|355749639|gb|EHH54038.1| hypothetical protein EGM_14774 [Macaca fascicularis]
gi|380811852|gb|AFE77801.1| glycine receptor subunit beta isoform A precursor [Macaca mulatta]
gi|383417611|gb|AFH32019.1| glycine receptor subunit beta isoform A precursor [Macaca mulatta]
gi|410215406|gb|JAA04922.1| glycine receptor, beta [Pan troglodytes]
gi|410259510|gb|JAA17721.1| glycine receptor, beta [Pan troglodytes]
gi|410292494|gb|JAA24847.1| glycine receptor, beta [Pan troglodytes]
gi|410341937|gb|JAA39915.1| glycine receptor, beta [Pan troglodytes]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|301767794|ref|XP_002919317.1| PREDICTED: glycine receptor subunit beta-like [Ailuropoda
melanoleuca]
Length = 498
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 101 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 160
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 161 NILLFIFRDGDVL 173
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 132 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 173
>gi|291401077|ref|XP_002716971.1| PREDICTED: glycine receptor, beta-like [Oryctolagus cuniculus]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|350539609|ref|NP_001234887.1| GABA-gated ion channel GRD precursor [Nasonia vitripennis]
gi|269856283|gb|ACZ51424.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 447
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL S +TL L+ L + IWKP+ YF N K + +T PN
Sbjct: 95 YSMDCYFRQSWVDRRLAFQSGKETLALSISMLAR-IWKPDTYFYNGKQSYLHTITSPNKF 153
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 154 VRLYQDGRVLY 164
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VR+ DG +LY
Sbjct: 124 SMLARIWKPDTYFYNGKQSYLHTITSPNKFVRLYQDGRVLY 164
>gi|410956676|ref|XP_003984965.1| PREDICTED: glycine receptor subunit beta [Felis catus]
Length = 499
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|149412099|ref|XP_001509830.1| PREDICTED: glycine receptor subunit beta [Ornithorhynchus anatinus]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK + + D DP + K +WKP+++F N K+A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKNANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|57096865|ref|XP_532701.1| PREDICTED: glycine receptor subunit beta [Canis lupus familiaris]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|4504023|ref|NP_000815.1| glycine receptor subunit beta isoform A precursor [Homo sapiens]
gi|260593684|ref|NP_001159532.1| glycine receptor subunit beta isoform A precursor [Homo sapiens]
gi|1346173|sp|P48167.1|GLRB_HUMAN RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|992687|gb|AAB37750.1| glycine receptor beta subunit [Homo sapiens]
gi|3834635|gb|AAC71033.1| glycine receptor beta subunit precursor [Homo sapiens]
gi|3834637|gb|AAC71034.1| glycine receptor beta subunit precursor [Homo sapiens]
gi|21619165|gb|AAH32635.1| Glycine receptor, beta [Homo sapiens]
gi|119625277|gb|EAX04872.1| glycine receptor, beta, isoform CRA_a [Homo sapiens]
gi|119625278|gb|EAX04873.1| glycine receptor, beta, isoform CRA_a [Homo sapiens]
gi|123979912|gb|ABM81785.1| glycine receptor, beta [synthetic construct]
gi|123994677|gb|ABM84940.1| glycine receptor, beta [synthetic construct]
gi|158254666|dbj|BAF83306.1| unnamed protein product [Homo sapiens]
gi|1589657|prf||2211391A Gly receptor:SUBUNIT=beta
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|345800631|ref|XP_546729.3| PREDICTED: gamma-aminobutyric acid receptor subunit delta isoform 1
[Canis lupus familiaris]
Length = 456
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLAYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|301778022|ref|XP_002924426.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit delta-like [Ailuropoda melanoleuca]
Length = 428
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDSRLAYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRI 134
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|326916205|ref|XP_003204400.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Meleagris gallopavo]
Length = 488
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 121 DFTMTLYLRHYWKDERLSFPSTTNNSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 180
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 181 MLRVFPDGHVLYSMRI 196
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 150 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSM 194
>gi|48374093|ref|NP_001001545.1| glycine receptor subunit beta precursor [Sus scrofa]
gi|47550387|emb|CAG29645.1| glycine receptor beta [Sus scrofa]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|390340436|ref|XP_003725243.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like
[Strongylocentrotus purpuratus]
Length = 500
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 18 PAIE---DYEVDLYLRQKWQDQRLKHHSIT-KTLDLNDPNLVKAIWKPEVYFPNAKHAEF 73
P IE +++VD++ RQ+W D RLK + T L LN +++ IW P+ YF N K A
Sbjct: 106 PVIEINMEFQVDMFFRQRWNDPRLKFNVTTFDELRLNTV-MLETIWYPDTYFYNGKEAIK 164
Query: 74 QYVTVPNVLVRINPDGEILY 93
VT PN + RI+P+G ILY
Sbjct: 165 HSVTTPNRMFRISPEGNILY 184
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IW P+ YF N K A VT PN + RI+P+G ILY
Sbjct: 145 MLETIWYPDTYFYNGKEAIKHSVTTPNRMFRISPEGNILY 184
>gi|296195315|ref|XP_002745336.1| PREDICTED: glycine receptor subunit beta isoform 1 [Callithrix
jacchus]
gi|403272264|ref|XP_003927993.1| PREDICTED: glycine receptor subunit beta [Saimiri boliviensis
boliviensis]
Length = 497
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|148683499|gb|EDL15446.1| glycine receptor, beta subunit, isoform CRA_b [Mus musculus]
Length = 472
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 76 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 135
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 136 NILLFIFRDGDVL 148
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 107 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 148
>gi|291400826|ref|XP_002716794.1| PREDICTED: gamma-aminobutyric acid (GABA) receptor, rho 3
[Oryctolagus cuniculus]
Length = 468
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L+K IW P+V+F ++K + TV N+
Sbjct: 103 DFTMTFYLRHYWKDERLSFPSRTNKSMTFDHRLIKKIWVPDVFFVHSKRSFIHDTTVENI 162
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ L I + R LD + +L
Sbjct: 163 MLRVHPDGNVLFSLRITVSAMCFMDFTRFPLDTQNCSL 200
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L+K IW P+V+F ++K + TV N+++R++PDG +L+ L
Sbjct: 132 DHRLIKKIWVPDVFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSL 176
>gi|197100468|ref|NP_001127403.1| gamma-aminobutyric acid receptor subunit gamma-1 precursor [Pongo
abelii]
gi|55729175|emb|CAH91324.1| hypothetical protein [Pongo abelii]
Length = 465
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN ++V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-SMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN ++V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-SMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>gi|348537180|ref|XP_003456073.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Oreochromis niloticus]
Length = 473
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLAFPSATNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD L
Sbjct: 160 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTL 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|192447409|ref|NP_001122232.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Danio
rerio]
gi|190337462|gb|AAI63099.1| Zgc:194845 [Danio rerio]
gi|190339844|gb|AAI63103.1| Zgc:194845 [Danio rerio]
Length = 472
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR WQD RL S D LVK IW P+V+F ++K + T+ N+
Sbjct: 109 DFTMTLYLRHYWQDDRLAFPSSNNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENI 168
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG ILY + I R LD + +L
Sbjct: 169 MLRVFPDGNILYSVRITVTALCSMDFSRFPLDTQNCSL 206
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LVK IW P+V+F ++K + T+ N+++R+ PDG ILY
Sbjct: 138 DARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILY 180
>gi|403284719|ref|XP_003933705.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Saimiri boliviensis boliviensis]
Length = 456
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
E+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 30 EEYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPN 88
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 89 KLLRIQDDGTLLYTMRL 105
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 62 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 103
>gi|403261128|ref|XP_003922982.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Saimiri
boliviensis boliviensis]
Length = 465
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSATNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|354476097|ref|XP_003500261.1| PREDICTED: glycine receptor subunit beta-like isoform 1 [Cricetulus
griseus]
Length = 497
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|348582534|ref|XP_003477031.1| PREDICTED: glycine receptor subunit beta-like [Cavia porcellus]
Length = 497
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|296196628|ref|XP_002745923.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Callithrix jacchus]
Length = 456
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
E+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 30 EEYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPN 88
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 89 KLLRIQDDGTLLYTMRL 105
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 62 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 103
>gi|260822689|ref|XP_002606734.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
gi|229292078|gb|EEN62744.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
Length = 439
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 10 LVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPE 62
LV SL +I+ DY + ++LR+ W+D+RL ++L L D LV+ +W P+
Sbjct: 21 LVDMSLSVASIDRVSEVDMDYTLTIFLREYWRDERLHFSETNRSLSL-DGRLVERLWVPD 79
Query: 63 VYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSI 97
+ NAK + VTV N L+R+ PDG +LY L I
Sbjct: 80 TFLVNAKSSFLHKVTVDNRLLRLFPDGRLLYGLRI 114
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LV+ +W P+ + NAK + VTV N L+R+ PDG +LY L
Sbjct: 68 DGRLVERLWVPDTFLVNAKSSFLHKVTVDNRLLRLFPDGRLLYGL 112
>gi|2317700|gb|AAB66600.1| gamma-aminobutyric-acid receptor rho-2B subunit [Morone americana]
Length = 473
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 100 DFTMTLYLRHYWKDERLAFPSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD L
Sbjct: 160 MLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTL 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 129 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSL 173
>gi|417411189|gb|JAA52040.1| Putative glycine receptor subunit beta, partial [Desmodus rotundus]
Length = 495
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 98 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 157
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 158 NILLFIFRDGDVLVSMRL 175
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 129 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 170
>gi|355687685|gb|EHH26269.1| hypothetical protein EGK_16188 [Macaca mulatta]
Length = 497
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|332819976|ref|XP_517321.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Pan troglodytes]
gi|397490163|ref|XP_003816077.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Pan paniscus]
gi|221039502|dbj|BAH11514.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
E+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 30 EEYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPN 88
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 89 KLLRIQDDGTLLYTMRL 105
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 62 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 103
>gi|345779693|ref|XP_003431881.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Canis
lupus familiaris]
Length = 663
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 269 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 327
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 328 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 359
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 297 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 341
>gi|332256201|ref|XP_003277206.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Nomascus leucogenys]
Length = 402
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 9 EDYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 67
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 68 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 106
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 38 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 82
>gi|195379266|ref|XP_002048401.1| GJ11370 [Drosophila virilis]
gi|194155559|gb|EDW70743.1| GJ11370 [Drosophila virilis]
Length = 633
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL TL L+ L + IWKP+ YF N K + +T PN
Sbjct: 81 YSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLAR-IWKPDTYFYNGKQSYLHTITTPNKF 139
Query: 83 VRINPDGEILY 93
VRI+ +G ILY
Sbjct: 140 VRIHQNGRILY 150
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VRI+ +G ILY
Sbjct: 110 SMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIHQNGRILY 150
>gi|449500174|ref|XP_004174921.1| PREDICTED: glycine receptor subunit beta isoform 2 [Taeniopygia
guttata]
Length = 446
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Query: 22 DYEVDLYLRQKWQDQRLK-----HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYV 76
DY V+++LRQKW D RLK S T T+D P + K +WKP+++F N K+A F V
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVD---PTMFKCLWKPDLFFANEKNANFHDV 156
Query: 77 TVPNVLVRINPDGEIL 92
T N+L+ I DG++L
Sbjct: 157 TQENILLFIFRDGDVL 172
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|350400005|ref|XP_003485706.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
impatiens]
Length = 515
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L + IWKP+ YF N KH+ +T PN
Sbjct: 102 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAR-IWKPDTYFYNGKHSYLHTITSPNKF 160
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 161 VRLYQDGRVLY 171
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N KH+ +T PN VR+ DG +LY
Sbjct: 131 SMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 171
>gi|380013377|ref|XP_003690737.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Apis
florea]
Length = 514
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L + IWKP+ YF N KH+ +T PN
Sbjct: 102 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAR-IWKPDTYFYNGKHSYLHTITSPNKF 160
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 161 VRLYQDGRVLY 171
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N KH+ +T PN VR+ DG +LY
Sbjct: 131 SMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 171
>gi|348525972|ref|XP_003450495.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oreochromis niloticus]
Length = 448
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 10 LVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPE 62
+VG S+ +I+ DY + +Y +Q W+D+RL + + L L D + +W P+
Sbjct: 29 VVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELNLNLTL-DNRVADQLWLPD 87
Query: 63 VYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 88 TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 138
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 106 KQKRKA---LDLN---DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159
+ KR A L+LN D + +W P+ YF N K + VTV N ++R++PDG +LY
Sbjct: 60 RDKRLAYGELNLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYG 119
Query: 160 L 160
L
Sbjct: 120 L 120
>gi|332218618|ref|XP_003258451.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Nomascus leucogenys]
Length = 456
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
E+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 30 EEYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPN 88
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 89 KLLRIQDDGTLLYTMRL 105
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 62 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 103
>gi|224049673|ref|XP_002198711.1| PREDICTED: glycine receptor subunit beta isoform 1 [Taeniopygia
guttata]
Length = 497
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Query: 22 DYEVDLYLRQKWQDQRLK-----HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYV 76
DY V+++LRQKW D RLK S T T+D P + K +WKP+++F N K+A F V
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVD---PTMFKCLWKPDLFFANEKNANFHDV 156
Query: 77 TVPNVLVRINPDGEILYMLSI 97
T N+L+ I DG++L + +
Sbjct: 157 TQENILLFIFRDGDVLVSMRL 177
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|198466281|ref|XP_001353953.2| GA20358 [Drosophila pseudoobscura pseudoobscura]
gi|198150528|gb|EAL29689.2| GA20358 [Drosophila pseudoobscura pseudoobscura]
Length = 718
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL TL L+ +++K IWKP+ YF N K + +T PN
Sbjct: 171 YSMDCYFRQSWVDKRLAFEGAQDTLALS-VSMLKRIWKPDTYFYNGKQSYLHTITTPNKF 229
Query: 83 VRINPDGEILY 93
VRI +G +LY
Sbjct: 230 VRIYQNGRVLY 240
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++K IWKP+ YF N K + +T PN VRI +G +LY
Sbjct: 200 SMLKRIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLY 240
>gi|300797181|ref|NP_001178250.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 4 [Homo
sapiens]
gi|119578059|gb|EAW57655.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_c
[Homo sapiens]
Length = 402
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 9 EDYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 67
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 68 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 106
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 38 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 82
>gi|449486896|ref|XP_002197205.2| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Taeniopygia guttata]
Length = 452
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDDRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRI 158
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>gi|449268505|gb|EMC79369.1| Gamma-aminobutyric acid receptor subunit delta, partial [Columba
livia]
Length = 429
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 61 EYTMTVFLHQSWRDDRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 119
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 120 LIRLQPDGVILYSIRI 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 89 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 133
>gi|348528649|ref|XP_003451829.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Oreochromis niloticus]
Length = 455
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W+D+RLK H L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQSWKDERLKFHGPMNILPLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIKDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTM 158
>gi|332843341|ref|XP_003314620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Pan troglodytes]
gi|397515749|ref|XP_003828108.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan paniscus]
gi|410305768|gb|JAA31484.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Pan troglodytes]
Length = 402
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 9 EDYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 67
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 68 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 106
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 38 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 82
>gi|221040640|dbj|BAH11997.1| unnamed protein product [Homo sapiens]
Length = 402
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
EDY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 9 EDYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 67
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 68 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 106
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 38 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 82
>gi|326672928|ref|XP_684047.4| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Danio rerio]
Length = 432
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D++ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 73 PINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 131
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+R+ +G ++Y L + N
Sbjct: 132 TPNRLLRLWSNGRVMYTLRLTIN 154
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+R+ +G ++Y L
Sbjct: 94 KFNSSMKLLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTL 149
>gi|402869286|ref|XP_003898694.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Papio anubis]
Length = 456
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
E+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 30 EEYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPN 88
Query: 81 VLVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 89 KLLRIQDDGTLLYTMRL 105
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 62 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 103
>gi|348511845|ref|XP_003443454.1| PREDICTED: glycine receptor subunit beta-like [Oreochromis
niloticus]
Length = 496
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLN-DPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RLK K+ L DP + K +WKP+++F N K A F VT N
Sbjct: 100 DYRVNIFLRQRWNDPRLKLPDDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQEN 159
Query: 81 VLVRINPDGEIL 92
+L+ I +G++L
Sbjct: 160 ILLFIFRNGDVL 171
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I +G++L
Sbjct: 130 DPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVL 171
>gi|241680546|ref|XP_002411569.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504304|gb|EEC13798.1| conserved hypothetical protein [Ixodes scapularis]
Length = 143
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D Y RQ+W DQRLK + + L+ +++ IWKP+ YF N K + +T PN
Sbjct: 31 EYSMDCYFRQRWTDQRLKFNGTINPISLH-IKMLERIWKPDTYFINGKGSYLHTITQPNK 89
Query: 82 LVRINPDGEILYMLSI 97
L+RI +G++LY + +
Sbjct: 90 LLRIYRNGDVLYSMRL 105
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+++ IWKP+ YF N K + +T PN L+RI +G++LY +
Sbjct: 62 MLERIWKPDTYFINGKGSYLHTITQPNKLLRIYRNGDVLYSM 103
>gi|410970262|ref|XP_003991605.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Felis
catus]
Length = 468
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L+K IW P+++F ++K + TV N+
Sbjct: 103 DFTMTFYLRHYWKDERLSFPSTTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENI 162
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +L+ L I + R LD + +L
Sbjct: 163 MLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 200
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L+K IW P+++F ++K + TV N+++R+ PDG +L+ L
Sbjct: 132 DHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSL 176
>gi|326932329|ref|XP_003212272.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Meleagris gallopavo]
Length = 428
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDDRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 119 LIRLQPDGVILYSIRI 134
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 132
>gi|90076504|dbj|BAE87932.1| unnamed protein product [Macaca fascicularis]
Length = 341
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 34 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 92
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 93 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 130
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 62 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 106
>gi|449276068|gb|EMC84760.1| Glycine receptor subunit beta [Columba livia]
Length = 497
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Query: 22 DYEVDLYLRQKWQDQRLK-----HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYV 76
DY V+++LRQKW D RLK S T T+D P + K +WKP+++F N K+A F V
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVD---PTMFKCLWKPDLFFANEKNANFHDV 156
Query: 77 TVPNVLVRINPDGEILYMLSI 97
T N+L+ I DG++L + +
Sbjct: 157 TQENILLFIFRDGDVLVSMRL 177
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|432926471|ref|XP_004080845.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oryzias latipes]
Length = 470
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T+ N+
Sbjct: 107 DFTMTLYLRHYWKDERLSFPSRTNQSRTFDSRLVKKIWVPDVFFVHSKRSFIHDTTMENI 166
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG ILY + +
Sbjct: 167 MLRVYPDGNILYSVRV 182
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LVK IW P+V+F ++K + T+ N+++R+ PDG ILY
Sbjct: 136 DSRLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY 178
>gi|326919230|ref|XP_003205885.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Meleagris gallopavo]
Length = 473
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWRDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFQNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFQNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|2736068|gb|AAB94045.1| gamma-aminobutyric acid receptor beta subunit [Takifugu rubripes]
Length = 453
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 10 LVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPE 62
+VG S+ +I+ DY + +Y +Q W+D+RL + + L L D + +W P+
Sbjct: 4 IVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTL-DNRVADQLWLPD 62
Query: 63 VYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 63 TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 113
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 51 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 95
>gi|340715405|ref|XP_003396204.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Bombus
terrestris]
Length = 515
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L + IWKP+ YF N KH+ +T PN
Sbjct: 102 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAR-IWKPDTYFYNGKHSYLHTITSPNKF 160
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 161 VRLYQDGRVLY 171
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N KH+ +T PN VR+ DG +LY
Sbjct: 131 SMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 171
>gi|326918265|ref|XP_003205410.1| PREDICTED: glycine receptor subunit beta-like [Meleagris gallopavo]
Length = 497
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Query: 22 DYEVDLYLRQKWQDQRLK-----HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYV 76
DY V+++LRQKW D RLK S T T+D P + K +WKP+++F N K+A F V
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVD---PTMFKCLWKPDLFFANEKNANFHDV 156
Query: 77 TVPNVLVRINPDGEILYMLSI 97
T N+L+ I DG++L + +
Sbjct: 157 TQENILLFIFRDGDVLVSMRL 177
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|301607832|ref|XP_002933494.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Xenopus (Silurana) tropicalis]
Length = 477
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWRDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKRSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|195166535|ref|XP_002024090.1| GL22849 [Drosophila persimilis]
gi|194107445|gb|EDW29488.1| GL22849 [Drosophila persimilis]
Length = 742
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL TL L+ +++K IWKP+ YF N K + +T PN
Sbjct: 171 YSMDCYFRQSWVDKRLAFEGAQDTLALS-VSMLKRIWKPDTYFYNGKQSYLHTITTPNKF 229
Query: 83 VRINPDGEILY 93
VRI +G +LY
Sbjct: 230 VRIYQNGRVLY 240
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++K IWKP+ YF N K + +T PN VRI +G +LY
Sbjct: 200 SMLKRIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLY 240
>gi|25151135|ref|NP_508428.2| Protein LGC-40 [Caenorhabditis elegans]
gi|373219979|emb|CCD71459.1| Protein LGC-40 [Caenorhabditis elegans]
Length = 494
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S + DY +D+Y +++W D RL H++ L + D + K +W P+VYF NA+ A
Sbjct: 68 GMSSFSAQTMDYHLDVYFQEEWYDHRLAHNASAPIL-VRDLTVFKMMWHPDVYFANARSA 126
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
FQ +T N LV + P+G + Y
Sbjct: 127 AFQDITDDNFLVWVYPNGRVWY 148
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ D + K +W P+VYF NA+ A FQ +T N LV + P+G + Y
Sbjct: 104 VRDLTVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 148
>gi|444525812|gb|ELV14162.1| Protein kinase C zeta type, partial [Tupaia chinensis]
Length = 980
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 73 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 131
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 132 LIRLQPDGVILYSIRI 147
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 101 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 145
>gi|3980057|emb|CAA39970.1| GABA-A receptor beta-4 subunit [Gallus gallus]
Length = 374
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL ++ + L L D + +W P+
Sbjct: 35 VGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTL-DNRVADQLWLPDT 93
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
YF N K + VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 94 YFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 149
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 81 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 125
>gi|62917|emb|CAA39969.1| GABA-A receptor,beta-4 subunit [Gallus gallus]
Length = 405
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL ++ + L L D + +W P+
Sbjct: 62 VGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTL-DNRVADQLWLPDT 120
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
YF N K + VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 121 YFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 176
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 152
>gi|120758|sp|P23576.1|GBRA2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
Length = 451
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ ++ IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNN-SMASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN+ ++ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 103 KFKGPMNILRLNN-SMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|351697422|gb|EHB00341.1| Gamma-aminobutyric acid receptor subunit delta [Heterocephalus
glaber]
Length = 438
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 72 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 130
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 131 LIRLQPDGVILYSIRITST 149
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 100 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 144
>gi|351695952|gb|EHA98870.1| Gamma-aminobutyric acid receptor subunit gamma-1 [Heterocephalus
glaber]
Length = 465
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI +G +LY L + N
Sbjct: 163 TPNRLLRIWNNGRVLYTLRLTIN 185
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI +G +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNNGRVLYTL 180
>gi|449266634|gb|EMC77674.1| Gamma-aminobutyric acid receptor subunit beta-4 [Columba livia]
Length = 410
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+DY + +Y +Q W+D+RL ++ + L L D + +W P+ YF N K + VTV N
Sbjct: 5 QDYTITMYFQQSWRDKRLAYNDLPLNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKN 63
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 64 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 102
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 34 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 78
>gi|405977684|gb|EKC42120.1| Glycine receptor subunit alpha-3 [Crassostrea gigas]
Length = 343
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 25 VDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLV 83
++ +LRQ+W+D RL H+S L+L+ L + +W P++YF N K+A F YV+VPN +
Sbjct: 1 MNFFLRQRWRDARLAHNSSGVPVLELHRKAL-EEVWVPDIYFVNEKNAHFHYVSVPNKMF 59
Query: 84 RINPDGEILYMLSIIENNTNKRKQKRKALD 113
+ PDG++ Y + + T + ++ LD
Sbjct: 60 NVFPDGKVSYSIRVTGTYTCEMDLRKYPLD 89
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 8/52 (15%)
Query: 109 RKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
RKAL+ +W P++YF N K+A F YV+VPN + + PDG++ Y +
Sbjct: 28 RKALE--------EVWVPDIYFVNEKNAHFHYVSVPNKMFNVFPDGKVSYSI 71
>gi|118089772|ref|XP_420379.2| PREDICTED: glycine receptor subunit beta [Gallus gallus]
Length = 497
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Query: 22 DYEVDLYLRQKWQDQRLK-----HHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYV 76
DY V+++LRQKW D RLK S T T+D P + K +WKP+++F N K+A F V
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVD---PTMFKCLWKPDLFFANEKNANFHDV 156
Query: 77 TVPNVLVRINPDGEILYMLSI 97
T N+L+ I DG++L + +
Sbjct: 157 TQENILLFIFRDGDVLVSMRL 177
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|432118042|gb|ELK37979.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Myotis
davidii]
Length = 383
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 1 QDYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 59
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 60 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 92
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 30 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 74
>gi|267844856|ref|NP_001161175.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 1 precursor
[Gallus gallus]
gi|120775|sp|P24045.1|GBRB4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-4;
AltName: Full=GABA(A) receptor subunit beta-4; Flags:
Precursor
Length = 488
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ + L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLPLNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 176
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 152
>gi|260792088|ref|XP_002591059.1| hypothetical protein BRAFLDRAFT_69386 [Branchiostoma floridae]
gi|229276259|gb|EEN47070.1| hypothetical protein BRAFLDRAFT_69386 [Branchiostoma floridae]
Length = 274
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V ++LRQ WQD RL L L D L +W P+++ PN+K A VTV N
Sbjct: 61 DYMVTIFLRQYWQDIRLSFEGTNANLTL-DGRLSDRLWVPDLFIPNSKQAFLHKVTVDNK 119
Query: 82 LVRINPDGEILY 93
L+R++PDG +LY
Sbjct: 120 LLRLHPDGTVLY 131
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D L +W P+++ PN+K A VTV N L+R++PDG +LY
Sbjct: 89 DGRLSDRLWVPDLFIPNSKQAFLHKVTVDNKLLRLHPDGTVLY 131
>gi|267844858|ref|NP_001161176.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 2 precursor
[Gallus gallus]
Length = 484
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ + L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLPLNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 176
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 152
>gi|341874618|gb|EGT30553.1| CBN-LGC-40 protein [Caenorhabditis brenneri]
Length = 490
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S + DY +D+Y +++W D RL H++ L + D + K +W P+VYF NA+ A
Sbjct: 63 GMSSFSAQTMDYHLDVYFQEEWYDHRLAHNASAPIL-VRDLEVFKMMWHPDVYFANARSA 121
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
FQ +T N LV + P+G + Y
Sbjct: 122 AFQDITDDNFLVWVYPNGRVWY 143
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ D + K +W P+VYF NA+ A FQ +T N LV + P+G + Y
Sbjct: 99 VRDLEVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 143
>gi|449500680|ref|XP_002194324.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Taeniopygia guttata]
Length = 442
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 48 DYTLTMYFQQSWRDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFQNDKKSFVHGVTVKNR 106
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 107 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 144
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 76 DNRVADQLWVPDTYFQNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 120
>gi|268577801|ref|XP_002643883.1| Hypothetical protein CBG02128 [Caenorhabditis briggsae]
Length = 497
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S + DY +D+Y +++W D RL H++ L + D + K +W P+VYF NA+ A
Sbjct: 63 GMSSFSAQTMDYHLDVYFQEEWYDHRLAHNNTAPIL-VRDLEVFKMMWHPDVYFANARSA 121
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
FQ +T N LV + P+G + Y
Sbjct: 122 AFQDITDDNFLVWVYPNGRVWY 143
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ D + K +W P+VYF NA+ A FQ +T N LV + P+G + Y
Sbjct: 99 VRDLEVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 143
>gi|255069726|ref|NP_001020724.1| gamma-aminobutyric acid receptor subunit rho-1 precursor [Danio
rerio]
Length = 466
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D RL S T D LVK IW P+++F ++K + T NV
Sbjct: 102 DFTMTLYLRHYWKDARLSFPSNTNQSMTFDGRLVKKIWVPDIFFVHSKRSFIHDTTTENV 161
Query: 82 LVRINPDGEILYMLSI 97
++R++PDG++LY L +
Sbjct: 162 MLRVHPDGKVLYSLRV 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R++PDG++LY L
Sbjct: 131 DGRLVKKIWVPDIFFVHSKRSFIHDTTTENVMLRVHPDGKVLYSL 175
>gi|308483557|ref|XP_003103980.1| CRE-LGC-42 protein [Caenorhabditis remanei]
gi|308258637|gb|EFP02590.1| CRE-LGC-42 protein [Caenorhabditis remanei]
Length = 383
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y++D+YL WQD ++H+ L +ND +++ IW P++YF NA+ A F VTV N
Sbjct: 32 YDMDMYLYMSWQDDTMRHNGSEHVL-VNDKDILDKIWLPDLYFANARTAYFHKVTVHNFN 90
Query: 83 VRINPDGEILYMLSIIENNTNKRKQKRKALDLND-PNLVKAIWKPEVYFPNAKHAEFQYV 141
+ I+P G + Y + N LDL D P + + + + + KH E
Sbjct: 91 MFISPQGTVSYGTRVTLNLACN-------LDLKDYPLDYQTCYIKVISYAHVKH-EMNVT 142
Query: 142 TVPNVLVRINPD 153
PN +R NP+
Sbjct: 143 WFPNDPIRFNPE 154
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 92 LYMLSIIENNTNKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRIN 151
+Y+ +++T + L +ND +++ IW P++YF NA+ A F VTV N + I+
Sbjct: 36 MYLYMSWQDDTMRHNGSEHVL-VNDKDILDKIWLPDLYFANARTAYFHKVTVHNFNMFIS 94
Query: 152 PDGEILY 158
P G + Y
Sbjct: 95 PQGTVSY 101
>gi|308460969|ref|XP_003092782.1| CRE-LGC-40 protein [Caenorhabditis remanei]
gi|308252493|gb|EFO96445.1| CRE-LGC-40 protein [Caenorhabditis remanei]
Length = 489
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 12 GRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHA 71
G S + DY +D+Y +++W D RL H++ L + D + K +W P+VYF NA+ A
Sbjct: 63 GMSSFSAQTMDYHLDVYFQEEWYDHRLAHNASAPIL-VRDLEVFKMMWHPDVYFANARSA 121
Query: 72 EFQYVTVPNVLVRINPDGEILY 93
FQ +T N LV + P+G + Y
Sbjct: 122 AFQDITDDNFLVWVYPNGRVWY 143
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ D + K +W P+VYF NA+ A FQ +T N LV + P+G + Y
Sbjct: 99 VRDLEVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 143
>gi|301607057|ref|XP_002933116.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Xenopus (Silurana) tropicalis]
Length = 418
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D L+K IW P+V+F ++K + T+ N+
Sbjct: 56 DFTMTLYLRHYWKDERLSFQSTNNRSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTMENI 115
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +L+ L I R LD + +L
Sbjct: 116 MLRVYPDGNVLFSLRITVTAMCFMDFSRFPLDTQNCSL 153
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L+K IW P+V+F ++K + T+ N+++R+ PDG +L+ L
Sbjct: 85 DGRLIKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNVLFSL 129
>gi|18026851|gb|AAL55656.1|AF228915_1 GABA receptor rho-1 subunit [Takifugu rubripes]
Length = 480
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 115 DFTMTLYLRHYWKDERLSFQSTNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 174
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 175 MLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSL 212
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG +LY L
Sbjct: 144 DSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSL 188
>gi|268563466|ref|XP_002646943.1| Hypothetical protein CBG21354 [Caenorhabditis briggsae]
Length = 327
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+DY++D+YL W+D RL + K + + + ++++ IW+P+ +F NAK AEF VT N
Sbjct: 1 QDYDMDIYLMMSWRDARLVN-PYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLN 59
Query: 81 VLVRINPDGEILY 93
L+RI PDG +LY
Sbjct: 60 FLMRIFPDGLVLY 72
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K + + + ++++ IW+P+ +F NAK AEF VT N L+RI PDG +LY
Sbjct: 24 KPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLY 72
>gi|410915504|ref|XP_003971227.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Takifugu rubripes]
Length = 482
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 10 LVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPE 62
+VG S+ +I+ DY + +Y +Q W+D+RL + + L L D + +W P+
Sbjct: 63 IVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTL-DNRVADQLWLPD 121
Query: 63 VYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 122 TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 172
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 110 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 154
>gi|410898114|ref|XP_003962543.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1-like [Takifugu rubripes]
Length = 476
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 111 DFTMTLYLRHYWKDERLSFQSTNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 170
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 171 MLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSL 208
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG +LY L
Sbjct: 140 DSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSL 184
>gi|354491372|ref|XP_003507829.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cricetulus griseus]
Length = 472
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|301619763|ref|XP_002939256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + ++ L L D + +W P+ YF N K + VTV N
Sbjct: 86 DYTITMYFQQSWRDKRLAYTALPLNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 144
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 145 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 182
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 111 ALDLN---DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
AL LN D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 106 ALPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 158
>gi|395843747|ref|XP_003794635.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Otolemur garnettii]
Length = 474
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|432960982|ref|XP_004086524.1| PREDICTED: glycine receptor subunit beta-like [Oryzias latipes]
Length = 495
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLN-DPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RLK K+ L DP + K +WKP+++F N K A F VT N
Sbjct: 100 DYRVNIFLRQRWNDPRLKLPDDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQEN 159
Query: 81 VLVRINPDGEIL 92
+L+ I +G++L
Sbjct: 160 ILLFIFRNGDVL 171
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I +G++L
Sbjct: 130 DPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVL 171
>gi|410915462|ref|XP_003971206.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Takifugu rubripes]
Length = 472
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR WQD RL S + D LVK IW P+V+F ++K + T+ N+
Sbjct: 109 DFTMTLYLRHYWQDDRLAFPSSSNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENI 168
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG ILY + I
Sbjct: 169 MLRVYPDGNILYSVRI 184
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LVK IW P+V+F ++K + T+ N+++R+ PDG ILY
Sbjct: 138 DARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY 180
>gi|328783196|ref|XP_397242.4| PREDICTED: GABA-gated ion channel isoform 1 [Apis mellifera]
Length = 514
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L + IWKP+ YF N KH+ +T PN
Sbjct: 102 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAR-IWKPDTYFYNGKHSYLHTITSPNKF 160
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 161 VRLYQDGRVLY 171
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N KH+ +T PN VR+ DG +LY
Sbjct: 131 SMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 171
>gi|20302089|ref|NP_620252.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Rattus
norvegicus]
gi|1730196|sp|P50573.1|GBRR3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-3;
AltName: Full=GABA(A) receptor subunit rho-3; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|1060975|dbj|BAA09322.1| GABA receptor rho-3 subunit precursor [Rattus norvegicus]
gi|149060280|gb|EDM10994.1| gamma-aminobutyric acid (GABA) receptor, rho 3 [Rattus norvegicus]
gi|1587165|prf||2206298A GABA receptor:SUBUNIT=rho3
Length = 464
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L++ IW P+++F ++K + TV N+
Sbjct: 100 DFTMTFYLRHYWKDERLSFPSTTNKSMTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ L I + R LD + +L
Sbjct: 160 MLRVHPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 197
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L++ IW P+++F ++K + TV N+++R++PDG +L+ L
Sbjct: 129 DRRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSL 173
>gi|395542827|ref|XP_003773326.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Sarcophilus harrisii]
Length = 475
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|557657|emb|CAA57075.1| Glycine receptor beta subunit [Mus musculus]
Length = 151
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 1 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 60
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 61 NILLFIFRDGDVL 73
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 32 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 73
>gi|395546003|ref|XP_003774884.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Sarcophilus harrisii]
Length = 458
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL + L L D + +W P+
Sbjct: 37 VGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYSDFDFNLTL-DNRVADQLWLPDT 95
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
YF N K + VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 96 YFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 151
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 106 KQKRKA---LDLN---DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159
+ KR A D N D + +W P+ YF N K + VTV N ++R++PDG +LY
Sbjct: 67 RDKRLAYSDFDFNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYG 126
Query: 160 L 160
L
Sbjct: 127 L 127
>gi|260593686|ref|NP_001159533.1| glycine receptor subunit beta isoform B precursor [Homo sapiens]
gi|332217583|ref|XP_003257938.1| PREDICTED: glycine receptor subunit beta isoform 2 [Nomascus
leucogenys]
gi|332820487|ref|XP_003310588.1| PREDICTED: glycine receptor subunit beta [Pan troglodytes]
gi|426345838|ref|XP_004040605.1| PREDICTED: glycine receptor subunit beta isoform 2 [Gorilla gorilla
gorilla]
gi|410215404|gb|JAA04921.1| glycine receptor, beta [Pan troglodytes]
gi|410341935|gb|JAA39914.1| glycine receptor, beta [Pan troglodytes]
Length = 303
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|242025548|ref|XP_002433186.1| Gaba-gated chloride channel, putative [Pediculus humanus
corporis]
gi|212518727|gb|EEB20448.1| Gaba-gated chloride channel, putative [Pediculus humanus
corporis]
Length = 423
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +DLY RQ W D+RL +TL L+ +++ IWKP+ YF N K + +T PN
Sbjct: 15 YSMDLYFRQSWIDKRLAFKGNKETLALS-ITMLEKIWKPDTYFYNGKQSYLHTITTPNKF 73
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 74 VRLYQDGRVLY 84
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VR+ DG +LY
Sbjct: 45 MLEKIWKPDTYFYNGKQSYLHTITTPNKFVRLYQDGRVLY 84
>gi|47225116|emb|CAF98743.1| unnamed protein product [Tetraodon nigroviridis]
Length = 502
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T+ N+
Sbjct: 104 DFTMTLYLRHYWKDERLAFPSQTNQSRTFDSRLVKKIWVPDVFFVHSKRSFIHDTTMENI 163
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG IL+ + +
Sbjct: 164 MLRVYPDGNILFSVRV 179
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LVK IW P+V+F ++K + T+ N+++R+ PDG IL+
Sbjct: 133 DSRLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILF 175
>gi|241714523|ref|XP_002413505.1| glutamate-gated chloride channel, putative [Ixodes scapularis]
gi|215507319|gb|EEC16813.1| glutamate-gated chloride channel, putative [Ixodes scapularis]
Length = 96
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 22 DYEVDLYLRQKWQDQRLKHH---SITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
DY V +YLR +W+D RL++ K L+LNDP+ +W+P+++ PN K A F + +
Sbjct: 23 DYTVQVYLRTRWKDSRLRYDNQPGKVKYLNLNDPS---KVWRPDLFIPNEKEANFHKLLL 79
Query: 79 PNVLVRINPDGEILY 93
PN +RI P G + Y
Sbjct: 80 PNTFLRIYPQGNVFY 94
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 108 KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K K L+LNDP+ +W+P+++ PN K A F + +PN +RI P G + Y
Sbjct: 47 KVKYLNLNDPS---KVWRPDLFIPNEKEANFHKLLLPNTFLRIYPQGNVFY 94
>gi|403284706|ref|XP_003933699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Saimiri boliviensis boliviensis]
Length = 474
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|119613436|gb|EAW93030.1| gamma-aminobutyric acid (GABA) A receptor, beta 1, isoform CRA_a
[Homo sapiens]
Length = 144
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P ++DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VT
Sbjct: 18 PDLKDYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVT 76
Query: 78 VPNVLVRINPDGEILYMLSI 97
V N ++R++PDG +LY L I
Sbjct: 77 VKNRMIRLHPDGTVLYGLRI 96
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 50 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 94
>gi|126331665|ref|XP_001364516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Monodelphis domestica]
Length = 475
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|426231665|ref|XP_004009859.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Ovis
aries]
Length = 474
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|410957678|ref|XP_003985452.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Felis catus]
Length = 476
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|390460895|ref|XP_002745915.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Callithrix jacchus]
Length = 474
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|27806987|ref|NP_776969.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|120766|sp|P08220.1|GBRB1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|757756|emb|CAA29190.1| GABA beta subunit [Bos taurus]
gi|296486584|tpg|DAA28697.1| TPA: gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|225661|prf||1309301B GABA/benzodiazepine receptor beta
Length = 474
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|355687261|gb|EHH25845.1| GABA(A) receptor subunit beta-1 [Macaca mulatta]
gi|355749255|gb|EHH53654.1| GABA(A) receptor subunit beta-1 [Macaca fascicularis]
gi|380784201|gb|AFE63976.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Macaca
mulatta]
Length = 474
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|301763282|ref|XP_002917058.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Ailuropoda melanoleuca]
Length = 475
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|194097327|ref|NP_000803.2| gamma-aminobutyric acid receptor subunit beta-1 precursor [Homo
sapiens]
gi|114594931|ref|XP_001154620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan troglodytes]
gi|395734909|ref|XP_002814763.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pongo abelii]
gi|397490147|ref|XP_003816069.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pan paniscus]
gi|23831128|sp|P18505.2|GBRB1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|182923|gb|AAA35862.1| gamma-aminobutyric acid receptor beta-1 subunit, partial [Homo
sapiens]
gi|119613437|gb|EAW93031.1| gamma-aminobutyric acid (GABA) A receptor, beta 1, isoform CRA_b
[Homo sapiens]
gi|168277852|dbj|BAG10904.1| gamma-aminobutyric-acid receptor subunit beta-1 precursor
[synthetic construct]
gi|189053428|dbj|BAG35594.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|6978867|ref|NP_037088.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Rattus
norvegicus]
gi|120769|sp|P15431.1|GBRB1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|57794|emb|CAA33493.1| GABA(A) receptor beta-1 preprotein [Rattus sp.]
gi|149035300|gb|EDL90004.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Rattus
norvegicus]
Length = 474
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|6679907|ref|NP_032095.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Mus
musculus]
gi|1730183|sp|P50571.1|GBRB1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|755155|gb|AAA79973.1| GABA-benzodiazepine receptor beta-1 subunit [Mus musculus]
gi|5804941|emb|CAA38993.1| GABA(A) receptor beta-1 subunit [Mus musculus]
gi|120577721|gb|AAI30259.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|148705866|gb|EDL37813.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_b [Mus musculus]
gi|187957278|gb|AAI57921.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|1095218|prf||2108275A GABA-A receptor:SUBUNIT=beta1
Length = 474
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|327274025|ref|XP_003221779.1| PREDICTED: glycine receptor subunit beta-like [Anolis carolinensis]
Length = 497
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK + K + DP + K +WKP+++F N K+A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPTDWKGSESLTVDPTMFKCLWKPDLFFANEKNANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|292624510|ref|XP_697486.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Danio
rerio]
Length = 464
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLSFPSKHNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENI 156
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + + R LD L
Sbjct: 157 MIRVYPDGHVLYSLRVTVTSACNMDFSRFPLDTQTCTL 194
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY L
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSL 170
>gi|260841417|ref|XP_002613912.1| hypothetical protein BRAFLDRAFT_98514 [Branchiostoma floridae]
gi|229299302|gb|EEN69921.1| hypothetical protein BRAFLDRAFT_98514 [Branchiostoma floridae]
Length = 223
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V +Y RQ+W D RL + + KT++L D N+ +W P+++F N K F +T N
Sbjct: 73 DYTVLIYFRQRWNDPRLSYSDLNKTINL-DSNIKVKMWVPDLFFVNEKDGRFHTITTDNR 131
Query: 82 LVRINPDGEILY 93
+RI P+G +LY
Sbjct: 132 YIRIYPNGNVLY 143
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D N+ +W P+++F N K F +T N +RI P+G +LY
Sbjct: 101 DSNIKVKMWVPDLFFVNEKDGRFHTITTDNRYIRIYPNGNVLY 143
>gi|148705865|gb|EDL37812.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_a [Mus musculus]
Length = 473
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|149731732|ref|XP_001502550.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Equus caballus]
Length = 468
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L+K IW P+++F ++K + T+ N+
Sbjct: 103 DFTMTFYLRHYWKDERLSFPSTTNRSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTMENI 162
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ L I + R LD + +L
Sbjct: 163 MLRVHPDGNVLFSLRITVSAMCFMDFGRFPLDTQNCSL 200
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L+K IW P+++F ++K + T+ N+++R++PDG +L+ L
Sbjct: 132 DHRLIKKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLFSL 176
>gi|311244175|ref|XP_003121344.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like [Sus
scrofa]
Length = 465
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY + I
Sbjct: 157 MLRVFPDGQVLYSMRI 172
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG++LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSM 170
>gi|31635|emb|CAA32875.1| GABA-A receptor beta 1 subunit [Homo sapiens]
Length = 474
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|344237712|gb|EGV93815.1| Gamma-aminobutyric acid receptor subunit rho-1 [Cricetulus griseus]
Length = 336
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|156350113|ref|XP_001622147.1| predicted protein [Nematostella vectensis]
gi|156208592|gb|EDO30047.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D++LRQ W D+RL H + T+ L++ ++ IW P+ YF NAK F VT N+
Sbjct: 47 DYTLDIFLRQSWVDERLSH-DLNTTMFLSN-TVMDKIWLPDSYFVNAKQGSFHKVTKDNM 104
Query: 82 LVRINPDGEILY 93
+V I PDG++ Y
Sbjct: 105 MVMIQPDGQVQY 116
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 108 KRKALDLNDP-----NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+R + DLN ++ IW P+ YF NAK F VT N++V I PDG++ Y
Sbjct: 61 ERLSHDLNTTMFLSNTVMDKIWLPDSYFVNAKQGSFHKVTKDNMMVMIQPDGQVQY 116
>gi|47227188|emb|CAG00550.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR WQD RL S + D LVK IW P+V+F ++K + T+ N+
Sbjct: 109 DFTMTLYLRHYWQDDRLAFPSSSNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENI 168
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG ILY + I
Sbjct: 169 MLRVYPDGNILYSVRI 184
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LVK IW P+V+F ++K + T+ N+++R+ PDG ILY
Sbjct: 138 DARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY 180
>gi|432899761|ref|XP_004076626.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oryzias latipes]
Length = 478
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 10 LVGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPE 62
+VG S+ +I+ DY + +Y +Q W D+RL + + L L D + +W P+
Sbjct: 29 IVGMSINIASIDSISEVNMDYTITMYFQQSWTDKRLAYGELDLNLTL-DNRVADQLWLPD 87
Query: 63 VYFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 88 TYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 138
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 112 LDLN---DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
LDLN D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 69 LDLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 120
>gi|410959654|ref|XP_003986418.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Felis catus]
Length = 392
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|334350266|ref|XP_001376986.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Monodelphis domestica]
Length = 480
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL + L L D + +W P+
Sbjct: 59 VGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYSDFDFNLTL-DNRVADQLWLPDT 117
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
YF N K + VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 118 YFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 173
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 106 KQKRKA---LDLN---DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159
+ KR A D N D + +W P+ YF N K + VTV N ++R++PDG +LY
Sbjct: 89 RDKRLAYSDFDFNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYG 148
Query: 160 L 160
L
Sbjct: 149 L 149
>gi|344288345|ref|XP_003415911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Loxodonta africana]
Length = 474
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|126310601|ref|XP_001376559.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Monodelphis domestica]
Length = 464
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLSFPSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|449275793|gb|EMC84561.1| Gamma-aminobutyric acid receptor subunit rho-3, partial [Columba
livia]
Length = 425
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D L+K IW P+V+F ++K + TV N+
Sbjct: 60 DFTMTLYLRHYWKDERLSFRSNKNKSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENI 119
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +L+ L I + R LD + +L
Sbjct: 120 MLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 157
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R K K++ D L+K IW P+V+F ++K + TV N+++R+ PDG +L+ L
Sbjct: 79 RSNKNKSMTF-DGRLIKKIWVPDVFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSL 133
>gi|410914014|ref|XP_003970483.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 526
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEIAYNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 140
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 141 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 172
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 110 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 154
>gi|395534598|ref|XP_003769327.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Sarcophilus harrisii]
Length = 464
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLSFPSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|334331078|ref|XP_001375153.2| PREDICTED: glycine receptor subunit beta-like [Monodelphis
domestica]
Length = 619
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK + + D DP + K +WKP+++F N K A F VT
Sbjct: 222 DYRVNIFLRQKWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKSANFHDVTQE 281
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 282 NILLFIFRDGDVLVSMRL 299
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 253 DPTMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 294
>gi|297292527|ref|XP_002804095.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Macaca mulatta]
Length = 422
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 31 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 90 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 121
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 59 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 103
>gi|296484083|tpg|DAA26198.1| TPA: gamma-aminobutyric acid receptor subunit rho-2-like [Bos
taurus]
Length = 421
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 53 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 112
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY + I
Sbjct: 113 MLRVFPDGQVLYSMRI 128
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG++LY +
Sbjct: 82 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSM 126
>gi|260817108|ref|XP_002603429.1| hypothetical protein BRAFLDRAFT_222514 [Branchiostoma floridae]
gi|229288748|gb|EEN59440.1| hypothetical protein BRAFLDRAFT_222514 [Branchiostoma floridae]
Length = 402
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V +++RQ+W D RL+H+ T+ L+ NL + +W P+++F N K A F T N
Sbjct: 38 DYIVTVFMRQRWIDSRLQHYDYNDTIILSSRNLDR-VWLPDIFFVNEKAAGFISTTGNNK 96
Query: 82 LVRINPDGEILY 93
++RI P+GE+LY
Sbjct: 97 MLRIYPNGEVLY 108
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 113 DLNDPNLVKA-----IWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D ND ++ + +W P+++F N K A F T N ++RI P+GE+LY
Sbjct: 58 DYNDTIILSSRNLDRVWLPDIFFVNEKAAGFISTTGNNKMLRIYPNGEVLY 108
>gi|431893824|gb|ELK03641.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Pteropus alecto]
Length = 534
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 169 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 227
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 228 LLRIQDDGTLLYTMRL 243
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 200 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 241
>gi|354493555|ref|XP_003508906.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-3-like [Cricetulus griseus]
Length = 468
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L++ IW P+++F ++K + TV N+
Sbjct: 103 DFTMTFYLRHYWKDERLAFPSTTNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTVENI 162
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ L I + R LD + +L
Sbjct: 163 MLRVHPDGNVLFSLRITVSAMCLMDFSRFPLDTQNCSL 200
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L++ IW P+++F ++K + TV N+++R++PDG +L+ L
Sbjct: 132 DHRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSL 176
>gi|432109367|gb|ELK33625.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Myotis davidii]
Length = 546
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 218 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 276
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 277 LLRIQDDGTLLYTMRL 292
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 249 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 290
>gi|426240403|ref|XP_004014095.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Ovis
aries]
Length = 468
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 100 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 158
Query: 82 LVRINPDGEILYML 95
L+R+ PDG ILY +
Sbjct: 159 LIRLQPDGVILYSI 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 128 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 172
>gi|47230062|emb|CAG10476.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 82 DFTMTLYLRHYWKDERLSFQSTNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 141
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 142 MLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSL 179
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG +LY L
Sbjct: 111 DSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSL 155
>gi|348571661|ref|XP_003471614.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cavia porcellus]
Length = 416
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 23 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 81
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 82 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 119
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 51 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 95
>gi|432897309|ref|XP_004076408.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oryzias latipes]
Length = 479
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR WQD RL S + D L+K IW P+V+F ++K + T+ N+
Sbjct: 116 DFTMTLYLRHYWQDDRLAFPSSSNKSRTFDSRLIKKIWVPDVFFVHSKRSFIHDTTMENI 175
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG ILY + I
Sbjct: 176 MLRVFPDGNILYSVRI 191
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D L+K IW P+V+F ++K + T+ N+++R+ PDG ILY
Sbjct: 145 DSRLIKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILY 187
>gi|426344254|ref|XP_004038689.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Gorilla
gorilla gorilla]
Length = 404
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 10 RDYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 68
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 69 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 107
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 39 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 83
>gi|410914447|ref|XP_003970699.1| PREDICTED: glycine receptor subunit beta-like [Takifugu rubripes]
Length = 497
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLN-DPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RLK K+ L DP + K +WKP+++F N K A F VT N
Sbjct: 100 DYRVNIFLRQRWNDPRLKLPPDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQEN 159
Query: 81 VLVRINPDGEIL 92
+L+ I +G++L
Sbjct: 160 ILLFIFRNGDVL 171
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I +G++L
Sbjct: 130 DPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVL 171
>gi|395542483|ref|XP_003773159.1| PREDICTED: glycine receptor subunit beta [Sarcophilus harrisii]
Length = 497
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK + + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|297292529|ref|XP_001099985.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Macaca mulatta]
Length = 405
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 31 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 90 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 121
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 59 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 103
>gi|449273441|gb|EMC82935.1| Gamma-aminobutyric acid receptor subunit beta-1, partial [Columba
livia]
Length = 397
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 1 DYTLTMYFQQSWRDKRLSYAGIPLNLTL-DNRVADQLWVPDTYFQNDKKSFVHGVTVKNR 59
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 60 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 97
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 29 DNRVADQLWVPDTYFQNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 73
>gi|395737478|ref|XP_002817187.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pongo
abelii]
Length = 492
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 167 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 226
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 227 MLRVFPDGHVLYSMRI 242
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 196 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 240
>gi|348541471|ref|XP_003458210.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
[Oreochromis niloticus]
Length = 469
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D++ Q W D RLK +S K L LN N+V IW P+ +F N++ + ++T
Sbjct: 108 PINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNS-NMVGKIWIPDTFFRNSRKSNAHWIT 166
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+R+ +G ++Y L + N
Sbjct: 167 TPNRLLRLWSNGRVMYTLRLTIN 189
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ + ++T PN L+R+ +G ++Y L
Sbjct: 129 KFNSSMKLLMLNS-NMVGKIWIPDTFFRNSRKSNAHWITTPNRLLRLWSNGRVMYTL 184
>gi|322802007|gb|EFZ22544.1| hypothetical protein SINV_08303 [Solenopsis invicta]
Length = 234
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L + IWKP+ YF N KH+ +T PN
Sbjct: 86 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAR-IWKPDTYFYNGKHSYLHTITSPNKF 144
Query: 83 VRINPDGEILY 93
VR+ +G +LY
Sbjct: 145 VRLYQNGRVLY 155
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N KH+ +T PN VR+ +G +LY
Sbjct: 115 SMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQNGRVLY 155
>gi|17536867|ref|NP_494579.1| Protein LGC-45 [Caenorhabditis elegans]
gi|351059463|emb|CCD73676.1| Protein LGC-45 [Caenorhabditis elegans]
Length = 327
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY++D+YL W+D RL + K + + + ++++ IW+P+ +F NAK AEF VT N
Sbjct: 2 DYDMDIYLMMSWRDARLVN-PYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNF 60
Query: 82 LVRINPDGEILY 93
L+RI PDG +LY
Sbjct: 61 LMRIFPDGLVLY 72
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K + + + ++++ IW+P+ +F NAK AEF VT N L+RI PDG +LY
Sbjct: 24 KPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLY 72
>gi|297291321|ref|XP_002803871.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Macaca mulatta]
gi|332218467|ref|XP_003258376.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Nomascus leucogenys]
gi|332218469|ref|XP_003258377.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Nomascus leucogenys]
gi|402867634|ref|XP_003897946.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Papio anubis]
gi|402867636|ref|XP_003897947.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Papio anubis]
gi|426353970|ref|XP_004044445.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Gorilla gorilla gorilla]
gi|426353972|ref|XP_004044446.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Gorilla gorilla gorilla]
Length = 392
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|291385738|ref|XP_002709463.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Oryctolagus cuniculus]
Length = 482
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 89 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 147
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 148 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 179
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 117 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 161
>gi|194769121|ref|XP_001966655.1| GF19863 [Drosophila ananassae]
gi|190619882|gb|EDV35406.1| GF19863 [Drosophila ananassae]
Length = 126
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY +D Y RQ W+D RL K+L L+ ++ IW+P+ Y N KH+ +TVPN
Sbjct: 51 DYAMDCYFRQYWRDNRLSFDGPIKSLSLS-IKILDKIWRPDTYLYNGKHSHIHTITVPNK 109
Query: 82 LVRINPDGEILYML 95
L+R+ +G ILY +
Sbjct: 110 LLRLYQNGGILYSM 123
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
++ IW+P+ Y N KH+ +TVPN L+R+ +G ILY +
Sbjct: 82 ILDKIWRPDTYLYNGKHSHIHTITVPNKLLRLYQNGGILYSM 123
>gi|403261134|ref|XP_003922985.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Saimiri boliviensis boliviensis]
gi|403261136|ref|XP_003922986.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 392
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|291235943|ref|XP_002737898.1| PREDICTED: glycine receptor alpha 4 subunit-like protein-like
[Saccoglossus kowalevskii]
Length = 464
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY V +Y RQ W D RL + T+T+ + D N+ + W P+++F N K A F YVT NV
Sbjct: 78 DYAVTMYFRQHWNDTRLAFND-TETIVVTD-NVRERFWVPDLFFVNVKRANFHYVTRDNV 135
Query: 82 LVRINPDGEILY 93
R++P G ILY
Sbjct: 136 FFRVHPTGLILY 147
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
N+ + W P+++F N K A F YVT NV R++P G ILY
Sbjct: 107 NVRERFWVPDLFFVNVKRANFHYVTRDNVFFRVHPTGLILY 147
>gi|291410181|ref|XP_002721372.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, epsilon
[Oryctolagus cuniculus]
Length = 517
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D+ Q W D+RL+++ +TL LN N+V +W P+ F N+K + +T+PN
Sbjct: 122 EYTIDIIFYQTWYDERLRYNDTFETLVLNG-NVVSQLWIPDTIFRNSKRTQEHEITMPNQ 180
Query: 82 LVRINPDGEILYMLSI 97
+VRI+ DG++LY + +
Sbjct: 181 MVRIHKDGKVLYTIRM 196
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
N+V +W P+ F N+K + +T+PN +VRI+ DG++LY +
Sbjct: 152 NVVSQLWIPDTIFRNSKRTQEHEITMPNQMVRIHKDGKVLYTI 194
>gi|300795702|ref|NP_001179448.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Bos
taurus]
gi|296491566|tpg|DAA33609.1| TPA: gamma-aminobutyric acid receptor subunit rho-3-like [Bos
taurus]
Length = 468
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L+K IW P+++F ++K + TV N+
Sbjct: 103 DFTMTFYLRHYWKDERLAFPSKTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENI 162
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ + I + R LD + +L
Sbjct: 163 MLRVHPDGSVLFSVRITVSAMCFMDFSRFPLDTQNCSL 200
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D L+K IW P+++F ++K + TV N+++R++PDG +L+
Sbjct: 132 DHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGSVLF 174
>gi|397504698|ref|XP_003822920.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Pan paniscus]
gi|397504700|ref|XP_003822921.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Pan paniscus]
Length = 392
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|332824528|ref|XP_003311431.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
gi|332824530|ref|XP_003311432.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
Length = 392
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|375493572|ref|NP_001243633.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
gi|389886549|ref|NP_001254511.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
Length = 392
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|194386474|dbj|BAG61047.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 90 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 127
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 59 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 103
>gi|443685844|gb|ELT89317.1| hypothetical protein CAPTEDRAFT_178435 [Capitella teleta]
Length = 357
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 27 LYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRIN 86
++LRQ W D+RL++ +++ LN N +W P+++ N K +F +TVPN L+R++
Sbjct: 1 MFLRQTWIDERLRYSGFNRSITLNY-NQFSRLWSPDLFIRNLKSGQFHDITVPNRLIRLS 59
Query: 87 PDGEILY 93
PDG +LY
Sbjct: 60 PDGTVLY 66
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
N +W P+++ N K +F +TVPN L+R++PDG +LY
Sbjct: 26 NQFSRLWSPDLFIRNLKSGQFHDITVPNRLIRLSPDGTVLY 66
>gi|395534596|ref|XP_003769326.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Sarcophilus harrisii]
Length = 455
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 94 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 153
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 154 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 191
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 123 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 167
>gi|345798002|ref|XP_848482.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Canis
lupus familiaris]
Length = 630
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 238 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 296
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 297 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 328
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 266 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 310
>gi|348518730|ref|XP_003446884.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oreochromis niloticus]
Length = 470
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR WQD RL S D LVK IW P+V+F ++K + T+ N+
Sbjct: 109 DFTMTLYLRHYWQDDRLAFPSSNNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENI 168
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG ILY + I
Sbjct: 169 MLRVYPDGNILYSVRI 184
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LVK IW P+V+F ++K + T+ N+++R+ PDG ILY
Sbjct: 138 DARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY 180
>gi|410959652|ref|XP_003986417.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Felis catus]
Length = 462
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|449485790|ref|XP_002190704.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3
[Taeniopygia guttata]
Length = 469
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D L+K IW P+V+F ++K + TV N+
Sbjct: 104 DFTMTLYLRHYWKDERLSFRSNKNKSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENI 163
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +L+ L I + R LD + +L
Sbjct: 164 MLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 201
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
R K K++ D L+K IW P+V+F ++K + TV N+++R+ PDG +L+ L
Sbjct: 123 RSNKNKSMTF-DGRLIKKIWVPDVFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSL 177
>gi|449265555|gb|EMC76735.1| Gamma-aminobutyric acid receptor subunit rho-1 [Columba livia]
Length = 472
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|406035356|ref|NP_001071414.2| gamma-aminobutyric acid receptor subunit rho-2 precursor [Bos
taurus]
gi|410516950|sp|Q0II76.4|GBRR2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 465
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY + I
Sbjct: 157 MLRVFPDGQVLYSMRI 172
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG++LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSM 170
>gi|354466063|ref|XP_003495495.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cricetulus griseus]
Length = 475
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|348535498|ref|XP_003455237.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 555
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 111 DYTLTMYFQQAWRDKRLSYSEIAYNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 169
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 170 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 201
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 139 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 183
>gi|426350896|ref|XP_004042999.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1
[Gorilla gorilla gorilla]
Length = 491
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQSWKDERLKFKGPMTVLRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSIIENN 101
L+RI DG +LY +S N+
Sbjct: 145 LLRITEDGTLLYTMSWYSNH 164
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTM 158
>gi|260812519|ref|XP_002600968.1| hypothetical protein BRAFLDRAFT_134278 [Branchiostoma floridae]
gi|229286258|gb|EEN56980.1| hypothetical protein BRAFLDRAFT_134278 [Branchiostoma floridae]
Length = 275
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D + RQ WQD RL+ K L LN+ L K IW P+ YF N K A +T PN
Sbjct: 21 EYTLDCFFRQTWQDTRLQFTGPPKELRLNNVMLDK-IWTPDTYFRNGKKAIAHTMTTPNK 79
Query: 82 LVRINPDGEILYMLSI 97
L RI DG +LY + +
Sbjct: 80 LFRIQEDGTVLYTMRL 95
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN+ L K IW P+ YF N K A +T PN L RI DG +LY +
Sbjct: 44 KELRLNNVMLDK-IWTPDTYFRNGKKAIAHTMTTPNKLFRIQEDGTVLYTM 93
>gi|432878723|ref|XP_004073382.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 526
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEIAYNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 140
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 141 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 172
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 110 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 154
>gi|431838152|gb|ELK00084.1| Gamma-aminobutyric acid receptor subunit rho-1 [Pteropus alecto]
Length = 462
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|791209|gb|AAA87730.1| GABA rho subunit [Rattus norvegicus]
gi|1183939|emb|CAA64832.1| GABA rho-1 subunit [Rattus norvegicus]
Length = 474
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|341879851|gb|EGT35786.1| hypothetical protein CAEBREN_28360 [Caenorhabditis brenneri]
Length = 934
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY++D+YL W+D RL + K + + + ++++ IW+P+ +F NAK AEF VT N
Sbjct: 609 DYDMDIYLMMSWRDARLVN-PYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNF 667
Query: 82 LVRINPDGEILY 93
L+RI PDG +LY
Sbjct: 668 LMRIFPDGLVLY 679
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 114 LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+ + ++++ IW+P+ +F NAK AEF VT N L+RI PDG +LY
Sbjct: 635 VKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLY 679
>gi|146286184|sp|P0C2W5.1|GBRB2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
Length = 472
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 78 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 136
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 137 MIRLHPDGTVLYGLRITTTTACMMDLRRYPLD 168
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 106 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 150
>gi|312191390|gb|ADQ43749.1| gamma-aminobutyric acid receptor subunit rho-3 [Xenopus laevis]
Length = 303
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S D L+K IW P+V+F ++K + T+ N+
Sbjct: 37 DFTMTFYLRHYWKDERLSFQSTNNRSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTMENI 96
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +L+ L I + R LD + +L
Sbjct: 97 MLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 134
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L+K IW P+V+F ++K + T+ N+++R+ PDG +L+ L
Sbjct: 66 DGRLIKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNVLFSL 110
>gi|403261130|ref|XP_003922983.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 456
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 94 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 153
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 154 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 191
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 123 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 167
>gi|326919234|ref|XP_003205887.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Meleagris gallopavo]
Length = 529
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ+W+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 157 EYTIDVFFRQRWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 215
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 216 LLRIQDDGTLLYTMRL 231
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 188 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 229
>gi|194216259|ref|XP_001500725.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Equus caballus]
Length = 486
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSM 195
>gi|327261515|ref|XP_003215575.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1-like [Anolis carolinensis]
Length = 479
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|296484072|tpg|DAA26187.1| TPA: gamma-aminobutyric acid (GABA) receptor, rho 1 [Bos taurus]
Length = 421
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 59 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 118
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 119 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 156
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 88 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 132
>gi|402534543|ref|NP_058987.2| gamma-aminobutyric acid receptor subunit rho-1 precursor [Rattus
norvegicus]
Length = 480
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|395509128|ref|XP_003758857.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Sarcophilus harrisii]
Length = 459
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK +K L LN+ +V IW P+ +F N K + +T PN
Sbjct: 80 EYTMDVFFRQTWTDERLKFRGPSKILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNK 138
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 139 LFRIMQNGTILYTMRLTIN 157
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K + K L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 97 KFRGPSKILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 152
>gi|194035313|ref|XP_001927040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Sus
scrofa]
Length = 462
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|118088822|ref|XP_426190.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Gallus
gallus]
Length = 478
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|344264641|ref|XP_003404400.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Loxodonta africana]
Length = 479
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|440911380|gb|ELR61056.1| Gamma-aminobutyric acid receptor subunit rho-2 [Bos grunniens
mutus]
Length = 493
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY + I
Sbjct: 182 MLRVFPDGQVLYSMRI 197
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG++LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSM 195
>gi|301774576|ref|XP_002922712.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like,
partial [Ailuropoda melanoleuca]
Length = 492
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 124 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 183
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 184 MLRVYPDGHVLYSMRI 199
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 153 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVYPDGHVLYSM 197
>gi|296475589|tpg|DAA17704.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 392
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|292620123|ref|XP_002664179.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Danio rerio]
Length = 483
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 88 DYTITMYFQQSWRDKRLSYTGIPLNLTL-DNRVADQLWVPDTYFINDKKSFVHGVTVKNR 146
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 147 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 178
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 116 DNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGL 160
>gi|224048437|ref|XP_002198040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Taeniopygia guttata]
Length = 478
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|113912067|gb|AAI22771.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Bos taurus]
Length = 490
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY + I
Sbjct: 182 MLRVFPDGQVLYSMRI 197
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG++LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSM 195
>gi|444518647|gb|ELV12283.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Tupaia chinensis]
Length = 413
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 87 EYTMDVFFRQTWTDERLKFGGPTEILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNK 145
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 146 LFRIMQNGTILYTMRLTIN 164
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 118 MVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 159
>gi|327283472|ref|XP_003226465.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Anolis carolinensis]
Length = 504
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + + L L D + +W P+ YF N K + VTV N
Sbjct: 95 DYTITMYFQQSWRDKRLAYSDLPLNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 153
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 154 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 191
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 123 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 167
>gi|18490288|gb|AAH22488.1| GABRA2 protein [Homo sapiens]
gi|325463907|gb|ADZ15724.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2 [synthetic
construct]
Length = 367
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSAAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSAAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|426234694|ref|XP_004011327.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Ovis
aries]
Length = 489
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 121 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 180
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY + I
Sbjct: 181 MLRVFPDGQVLYSMRI 196
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG++LY +
Sbjct: 150 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSM 194
>gi|402867640|ref|XP_003897949.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Papio anubis]
Length = 465
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|395849939|ref|XP_003797564.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Otolemur garnettii]
Length = 462
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLAFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|326672926|ref|XP_001920091.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Danio rerio]
Length = 487
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y VD++ RQ+W D+RLK H L LN+ + IW P+ +F N K + +T+PN
Sbjct: 122 EYTVDVFFRQRWTDERLKFHGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 180
Query: 82 LVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 181 LLRIMENGTLLYTMRL 196
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI +G +LY +
Sbjct: 153 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLYTM 194
>gi|119568942|gb|EAW48557.1| gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
Length = 465
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|124487131|ref|NP_001074659.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Mus
musculus]
gi|148665807|gb|EDK98223.1| mCG129069 [Mus musculus]
gi|187956351|gb|AAI51106.1| Gamma-aminobutyric acid (GABA) receptor, rho 3 [Mus musculus]
Length = 464
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L++ IW P+++F ++K + TV N+
Sbjct: 100 DFTMTFYLRHYWKDERLSFPSTTNKSMTFDRRLLQKIWVPDIFFVHSKRSFIHDTTVENI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ L I + R LD + +L
Sbjct: 160 MLRVHPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 197
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L++ IW P+++F ++K + TV N+++R++PDG +L+ L
Sbjct: 129 DRRLLQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSL 173
>gi|327281228|ref|XP_003225351.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Anolis carolinensis]
Length = 447
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 54 DYTLTMYFQQSWRDKRLSYSGIPLNLTL-DNRVADNLWVPDTYFLNDKKSFVHGVTVKNR 112
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 113 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 144
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 82 DNRVADNLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 126
>gi|426353966|ref|XP_004044443.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Gorilla gorilla gorilla]
Length = 462
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|456428|gb|AAA52510.1| gamma-amino butyric acid [Homo sapiens]
Length = 465
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|223590212|sp|P50572.2|GBRR1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|149045581|gb|EDL98581.1| rCG55101 [Rattus norvegicus]
Length = 480
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|406035350|ref|NP_002034.3| gamma-aminobutyric acid receptor subunit rho-2 precursor [Homo
sapiens]
gi|410516956|sp|P28476.5|GBRR2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|123093748|gb|AAI30355.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|123093914|gb|AAI30353.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|313883414|gb|ADR83193.1| Unknown protein [synthetic construct]
Length = 465
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|332218465|ref|XP_003258375.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Nomascus leucogenys]
Length = 462
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|350594449|ref|XP_003134134.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-1-like
[Sus scrofa]
Length = 406
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 15 LCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQ 74
L + ++Y +D++ RQ W+D+RLK L LN+ + IW P+ +F N K +
Sbjct: 84 LFSKITQEYTIDVFFRQSWKDERLKFKGPMTVLRLNNL-MASKIWTPDTFFHNGKKSVAH 142
Query: 75 YVTVPNVLVRINPDGEILYMLSI 97
+T+PN L+RI DG +LY + +
Sbjct: 143 NMTMPNKLLRITEDGTLLYTMRL 165
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN+ + IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 108 KFKGPMTVLRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTM 163
>gi|334311425|ref|XP_001379989.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Monodelphis domestica]
Length = 449
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK +K L LN+ +V IW P+ +F N K + +T PN
Sbjct: 75 EYTMDVFFRQTWTDERLKFRGPSKILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNK 133
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 134 LFRIMQNGTILYTMRLTIN 152
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K + K L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 92 KFRGPSKILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 147
>gi|297291319|ref|XP_002803870.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Macaca mulatta]
gi|402867632|ref|XP_003897945.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Papio anubis]
Length = 462
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|403261132|ref|XP_003922984.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 473
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 111 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 170
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 171 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 208
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 140 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 184
>gi|354495036|ref|XP_003509638.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like,
partial [Cricetulus griseus]
Length = 340
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 61 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 119
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 120 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 151
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 89 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 133
>gi|281344247|gb|EFB19831.1| hypothetical protein PANDA_011706 [Ailuropoda melanoleuca]
Length = 479
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 120 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 179
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 180 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 217
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 149 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 193
>gi|109072025|ref|XP_001095576.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Macaca mulatta]
Length = 465
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>gi|550337|emb|CAA51326.1| GABA-A receptor beta 2 subunit [Gallus gallus]
Length = 430
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|395534594|ref|XP_003769325.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Sarcophilus harrisii]
Length = 473
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|375493570|ref|NP_001243632.1| gamma-aminobutyric acid receptor subunit rho-1 isoform b precursor
[Homo sapiens]
Length = 462
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|351699565|gb|EHB02484.1| Gamma-aminobutyric acid receptor subunit rho-1 [Heterocephalus
glaber]
Length = 477
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|326916211|ref|XP_003204403.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like,
partial [Meleagris gallopavo]
Length = 437
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 77 DFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 136
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 137 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 174
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 106 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 150
>gi|355692545|gb|EHH27148.1| hypothetical protein EGK_17280, partial [Macaca mulatta]
gi|355777888|gb|EHH62924.1| hypothetical protein EGM_15786, partial [Macaca fascicularis]
Length = 394
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 1 QDYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 59
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 60 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 98
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 30 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 74
>gi|332824526|ref|XP_001157592.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan troglodytes]
Length = 462
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|194382230|dbj|BAG58870.1| unnamed protein product [Homo sapiens]
Length = 462
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|440897658|gb|ELR49302.1| Gamma-aminobutyric acid receptor subunit rho-3 [Bos grunniens
mutus]
Length = 418
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L+K IW P+++F ++K + TV N+
Sbjct: 56 DFTMTFYLRHYWKDERLAFPSKTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENI 115
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ + I + R LD + +L
Sbjct: 116 MLRVHPDGSVLFSVRITVSAMCFMDFSRFPLDTQNCSL 153
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D L+K IW P+++F ++K + TV N+++R++PDG +L+
Sbjct: 85 DHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGSVLF 127
>gi|397504696|ref|XP_003822919.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Pan paniscus]
Length = 462
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 100 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 160 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 129 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 173
>gi|326924418|ref|XP_003208424.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Meleagris gallopavo]
Length = 498
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ + L L D + +W P+ YF N K + VTV N
Sbjct: 94 DYTITMYFQQSWRDKRLAYNDLPLNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 152
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 153 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 190
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 122 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 166
>gi|296198769|ref|XP_002746860.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Callithrix jacchus]
Length = 474
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|332218624|ref|XP_003258454.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Nomascus leucogenys]
Length = 474
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQPWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|440910237|gb|ELR60053.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Bos
grunniens mutus]
Length = 393
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 21 EDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
+DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 1 QDYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKN 59
Query: 81 VLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 60 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 98
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 30 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 74
>gi|1470364|gb|AAB36480.1| gamma-aminobutyric acid type A receptor alpha 6 subunit [Homo
sapiens]
Length = 453
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|296236667|ref|XP_002763418.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 isoform
3 [Callithrix jacchus]
Length = 493
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK K L LN+ L IW P+ +F N K + +T PN
Sbjct: 111 EYTIDVFFRQTWHDERLKFDGPMKILPLNNNLLASKIWTPDTFFHNGKKSVAHNMTTPNK 170
Query: 82 LVRINPDGEILYMLSI 97
L+R+ +G +LY + +
Sbjct: 171 LLRLVDNGTLLYTMRL 186
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN+ L IW P+ +F N K + +T PN L+R+ +G +LY +
Sbjct: 134 KILPLNNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTM 184
>gi|281344248|gb|EFB19832.1| hypothetical protein PANDA_011707 [Ailuropoda melanoleuca]
Length = 493
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 118 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 177
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 178 MLRVYPDGHVLYSMRI 193
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 147 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVYPDGHVLYSM 191
>gi|182911|gb|AAA52509.1| gamma-aminobutyric acid receptor type A rho-1 subunit [Homo
sapiens]
Length = 473
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 111 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 170
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 171 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 208
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 140 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 184
>gi|410906147|ref|XP_003966553.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3-like
[Takifugu rubripes]
Length = 450
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKT---LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
+Y++D+ Q W D RL+++S + T L LN N+V IW P+ F N+K+A+ ++T
Sbjct: 91 EYQIDIIFAQSWVDTRLRYNSSSTTMPTLTLNS-NMVGLIWLPDTIFRNSKNADSHWITT 149
Query: 79 PNVLVRINPDGEILYMLSIIEN 100
PN L+RI +G ILY L + N
Sbjct: 150 PNQLLRIRNNGTILYTLRMTIN 171
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 103 NKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
N L LN N+V IW P+ F N+K+A+ ++T PN L+RI +G ILY L
Sbjct: 110 NSSSTTMPTLTLNS-NMVGLIWLPDTIFRNSKNADSHWITTPNQLLRIRNNGTILYTL 166
>gi|395849937|ref|XP_003797563.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Otolemur garnettii]
Length = 480
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLAFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|345324528|ref|XP_001505697.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3, partial
[Ornithorhynchus anatinus]
Length = 470
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL + I L L D + +W P+
Sbjct: 58 VGMSIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTL-DNRVADQLWVPDT 116
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 117 YFLNDKKSFVHGVTVKNSMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 166
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 104 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNSMIRLHPDGTVLYGL 148
>gi|126310323|ref|XP_001367190.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Monodelphis domestica]
Length = 473
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|354501856|ref|XP_003513004.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Cricetulus griseus]
Length = 451
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|348563379|ref|XP_003467485.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cavia porcellus]
Length = 474
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|345778210|ref|XP_539038.3| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1 [Canis lupus familiaris]
Length = 479
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|149620175|ref|XP_001521784.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2,
partial [Ornithorhynchus anatinus]
Length = 393
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 23 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 81
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 82 LLRIQDDGTLLYTMRL 97
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 54 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 95
>gi|363738921|ref|XP_003642096.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Gallus
gallus]
Length = 473
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 137
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 138 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 169
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 107 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 151
>gi|351715095|gb|EHB18014.1| Gamma-aminobutyric acid receptor subunit rho-2 [Heterocephalus
glaber]
Length = 491
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 123 DFTMTLYLRHYWKDERLAFSSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 182
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 183 MLRLFPDGHVLYSMRI 198
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 152 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRLFPDGHVLYSM 196
>gi|327273674|ref|XP_003221605.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Anolis carolinensis]
Length = 442
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 66 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 124
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 125 LLRIQDDGTLLYTMRL 140
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 97 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 138
>gi|327260679|ref|XP_003215161.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Anolis carolinensis]
Length = 481
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|120659826|gb|AAI30345.1| Gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo sapiens]
gi|313883058|gb|ADR83015.1| Unknown protein [synthetic construct]
Length = 474
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|47217919|emb|CAG06525.1| unnamed protein product [Tetraodon nigroviridis]
Length = 149
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITK---TLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78
+Y++D+ Q W D RL+++S + TL LN N+V IW P+ F N+K+A+ ++T
Sbjct: 24 EYQIDIIFAQTWVDTRLRYNSSSTSMPTLTLNS-NMVGLIWLPDTIFRNSKNADSHWITT 82
Query: 79 PNVLVRINPDGEILYMLSIIEN 100
PN L+RI +G ILY L + N
Sbjct: 83 PNQLLRIRNNGTILYTLRMTIN 104
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 103 NKRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
N L LN N+V IW P+ F N+K+A+ ++T PN L+RI +G ILY L
Sbjct: 43 NSSSTSMPTLTLNS-NMVGLIWLPDTIFRNSKNADSHWITTPNQLLRIRNNGTILYTL 99
>gi|344244455|gb|EGW00559.1| Gamma-aminobutyric acid receptor subunit alpha-2 [Cricetulus
griseus]
Length = 377
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 63 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 121
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 122 LLRIQDDGTLLYTMRL 137
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 94 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 135
>gi|395855528|ref|XP_003800208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Otolemur garnettii]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|395529681|ref|XP_003766937.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Sarcophilus harrisii]
Length = 479
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 111 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 169
Query: 82 LVRINPDGEILYMLSI 97
L+R+ P+G ILY + I
Sbjct: 170 LIRLQPNGVILYSIRI 185
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ P+G ILY +
Sbjct: 139 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILYSI 183
>gi|194097386|ref|NP_002033.2| gamma-aminobutyric acid receptor subunit rho-1 isoform a precursor
[Homo sapiens]
gi|223590210|sp|P24046.2|GBRR1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|119568943|gb|EAW48558.1| gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo sapiens]
Length = 479
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|8393390|ref|NP_058761.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Rattus
norvegicus]
gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 preprotein [Rattus sp.]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|6679909|ref|NP_032096.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Mus
musculus]
gi|6978869|ref|NP_037089.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Rattus
norvegicus]
gi|52000957|sp|P63138.1|GBRB2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|57798|emb|CAA33494.1| GABA(A) receptor beta-2 preprotein [Rattus sp.]
gi|755157|gb|AAA79974.1| GABA-benzodiazepine receptor beta-2 subunit [Mus musculus]
gi|26355430|dbj|BAC41155.1| unnamed protein product [Mus musculus]
gi|46371157|gb|AAS90347.1| GABA-A receptor beta2 subunit [Rattus norvegicus]
gi|148700397|gb|EDL32344.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878001|gb|AAI45974.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878377|gb|AAI45976.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|149052307|gb|EDM04124.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Rattus
norvegicus]
gi|1095219|prf||2108275B GABA-A receptor:SUBUNIT=beta2
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|301774574|ref|XP_002922711.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Ailuropoda melanoleuca]
Length = 476
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|292620121|ref|XP_683856.4| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Danio rerio]
Length = 524
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y VD++ RQ+W D+RLK H L LN+ + IW P+ +F N K + +T+PN
Sbjct: 152 EYTVDVFFRQRWTDERLKFHGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 210
Query: 82 LVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 211 LLRIMENGTLLYTMRL 226
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI +G +LY +
Sbjct: 183 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLYTM 224
>gi|260822683|ref|XP_002606731.1| hypothetical protein BRAFLDRAFT_82371 [Branchiostoma floridae]
gi|229292075|gb|EEN62741.1| hypothetical protein BRAFLDRAFT_82371 [Branchiostoma floridae]
Length = 449
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + + LRQ W+D+RL +++ L D LV+ +W P+ +FPN+K + VT+ N
Sbjct: 97 DFTICILLRQYWKDERLAFTGTNESISL-DGRLVEYLWVPDTFFPNSKFSFLHNVTMANR 155
Query: 82 LVRINPDGEILY---MLSIIENNTNKRK 106
L+R+ PDG I+Y + I E N + RK
Sbjct: 156 LLRLWPDGSIVYGQRVTVIAECNMDLRK 183
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
D LV+ +W P+ +FPN+K + VT+ N L+R+ PDG I+Y
Sbjct: 125 DGRLVEYLWVPDTFFPNSKFSFLHNVTMANRLLRLWPDGSIVY 167
>gi|426350886|ref|XP_004042994.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Gorilla gorilla gorilla]
Length = 449
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 72 EYTMDVFFRQTWTDERLKFGGPTEILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNK 130
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 131 LFRIMQNGTILYTMRLTIN 149
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 97 LSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 144
>gi|40736923|dbj|BAD06984.1| gamma-aminobutyric acid A receptor subunit rho 1 [Oreochromis
niloticus]
Length = 242
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 30 DFTMTLYLRHYWEDERLSFPSTNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 89
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 90 MLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSL 127
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG +LY L
Sbjct: 59 DSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSL 103
>gi|355561901|gb|EHH18533.1| hypothetical protein EGK_15159 [Macaca mulatta]
gi|355757708|gb|EHH61233.1| hypothetical protein EGM_19192 [Macaca fascicularis]
Length = 479
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|348519034|ref|XP_003447036.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 515
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 74 DYTLTMYFQQAWRDKRLSYSDIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 132
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 133 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 164
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 102 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 146
>gi|297291317|ref|XP_001095237.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Macaca mulatta]
gi|402867630|ref|XP_003897944.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Papio anubis]
Length = 480
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|189520298|ref|XP_695300.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
isoform 2 [Danio rerio]
Length = 471
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL + I L L D + +W P+
Sbjct: 63 VGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLNLTL-DNRVADQLWVPDT 121
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 122 YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|149691051|ref|XP_001493098.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Equus caballus]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|426353968|ref|XP_004044444.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Gorilla gorilla gorilla]
Length = 479
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|426235139|ref|XP_004011548.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Ovis
aries]
Length = 606
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 244 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 303
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY L +
Sbjct: 304 MLRVQPDGKVLYSLRV 319
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 273 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 317
>gi|118097255|ref|XP_001232378.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Gallus gallus]
gi|542693|pir||JH0829 gamma-aminobutyric acid A receptor beta 2S chain precursor -
chicken
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|6679911|ref|NP_032097.1| gamma-aminobutyric acid receptor subunit beta-3 isoform a precursor
[Mus musculus]
gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|52000959|sp|P63080.1|GBRB3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|755159|gb|AAB60502.1| GABA-benzodiazepine receptor beta-3 subunit [Mus musculus]
gi|26333025|dbj|BAC30230.1| unnamed protein product [Mus musculus]
gi|74181039|dbj|BAE27794.1| unnamed protein product [Mus musculus]
gi|149031467|gb|EDL86447.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Rattus norvegicus]
gi|151555297|gb|AAI48599.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|157169890|gb|AAI53160.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|226316|prf||1506343B GABA A receptor beta
gi|1095220|prf||2108275C GABA-A receptor:SUBUNIT=beta3
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|332824524|ref|XP_527447.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Pan troglodytes]
Length = 479
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|332218463|ref|XP_003258374.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Nomascus leucogenys]
Length = 479
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>gi|426378392|ref|XP_004055911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Gorilla gorilla gorilla]
Length = 475
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid (GABA) A receptor, beta 3 [Homo sapiens]
gi|157928120|gb|ABW03356.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|395542841|ref|XP_003773333.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Sarcophilus harrisii]
Length = 454
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|327260683|ref|XP_003215163.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 5 [Anolis carolinensis]
Length = 491
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|114656020|ref|XP_510254.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Pan troglodytes]
Length = 475
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|114603240|ref|XP_001144345.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Pan troglodytes]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|432098879|gb|ELK28374.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Myotis davidii]
Length = 402
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFRGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 88 DGEILYMLSII--ENNTNKRKQKRKALDLNDPN--LVKAIWKPEVYFPNAKHAEFQYVTV 143
D E+ Y + + + T++R + R ++ N +V IW P+ +F N K + +T
Sbjct: 72 DVEMEYTMDVFFRQTWTDERLKFRGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTT 131
Query: 144 PNVLVRINPDGEILYML 160
PN L RI +G ILY +
Sbjct: 132 PNKLFRIMQNGTILYTM 148
>gi|426378382|ref|XP_004055906.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Gorilla gorilla gorilla]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|348563381|ref|XP_003467486.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Cavia porcellus]
Length = 488
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSM 195
>gi|332843337|ref|XP_003314618.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan troglodytes]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|326928400|ref|XP_003210368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Meleagris gallopavo]
Length = 491
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|291396610|ref|XP_002714623.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Oryctolagus cuniculus]
Length = 479
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG +LY L + R LD +L
Sbjct: 177 MLRVQPDGRVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG +LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGRVLYSL 190
>gi|395505010|ref|XP_003756839.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Sarcophilus harrisii]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|126331783|ref|XP_001372457.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Monodelphis domestica]
Length = 454
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|386781493|ref|NP_001247631.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Macaca
mulatta]
gi|402873749|ref|XP_003900724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Papio anubis]
gi|380811404|gb|AFE77577.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Macaca mulatta]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|57525770|ref|NP_001003587.1| glycine receptor subunit beta [Danio rerio]
gi|50417167|gb|AAH78269.1| Glycine receptor, beta b [Danio rerio]
gi|67513948|dbj|BAD99559.1| glycine receptor beta subunit 2 [Danio rerio]
Length = 494
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLN-DPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL+ K+ L DP + K +WKP+++F N K A F VT N
Sbjct: 100 DYRVNIFLRQRWNDPRLRLPQDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQEN 159
Query: 81 VLVRINPDGEIL 92
+L+ I +G++L
Sbjct: 160 ILLFIFRNGDVL 171
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I +G++L
Sbjct: 130 DPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVL 171
>gi|292615077|ref|XP_002662540.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Danio rerio]
Length = 481
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL + I L L D + +W P+
Sbjct: 63 VGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLNLTL-DNRVADQLWVPDT 121
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
YF N K + VTV N ++R++PDG +LY L I +R LD + L
Sbjct: 122 YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|150247144|ref|NP_001092850.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Bos
taurus]
gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos taurus]
Length = 472
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|62088170|dbj|BAD92532.1| gamma-aminobutyric acid A receptor, alpha 2 precursor variant [Homo
sapiens]
Length = 461
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 96 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 154
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 155 LLRIQDDGTLLYTMRL 170
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 127 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 168
>gi|204204|gb|AAC42030.1| GABA-A receptor alpha-2 subunit [Rattus norvegicus]
Length = 432
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 67 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 125
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 126 LLRIQDDGTLLYTMRL 141
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 98 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 139
>gi|197100628|ref|NP_001126829.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Pongo
abelii]
gi|55732783|emb|CAH93089.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|397504694|ref|XP_003822918.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan paniscus]
Length = 480
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>gi|397473110|ref|XP_003808063.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pan
paniscus]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|344265222|ref|XP_003404684.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Loxodonta africana]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|326928398|ref|XP_003210367.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Meleagris gallopavo]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|262527817|gb|ACY69094.1| gamma-aminobutyric acid A receptor beta 2 isoform 4 [Homo sapiens]
Length = 372
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|148689912|gb|EDL21859.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Mus musculus]
Length = 472
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|118097253|ref|XP_414492.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Gallus gallus]
gi|224068159|ref|XP_002193169.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Taeniopygia guttata]
Length = 491
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|383847068|ref|XP_003699177.1| PREDICTED: gamma-aminobutyric acid receptor alpha-like [Megachile
rotundata]
Length = 593
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL +TL L+ L K IWKP+ YF N K + +T PN
Sbjct: 180 YSMDCYFRQSWVDRRLAFQGGKETLALSISMLAK-IWKPDTYFYNGKQSYLHTITSPNKF 238
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 239 VRLYKDGRVLY 249
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VR+ DG +LY
Sbjct: 209 SMLAKIWKPDTYFYNGKQSYLHTITSPNKFVRLYKDGRVLY 249
>gi|301753445|ref|XP_002912564.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Ailuropoda melanoleuca]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|188484479|gb|ACD50863.1| gamma-aminobutyric acid A receptor alpha 2 [Felis catus]
Length = 411
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 48 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 106
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 107 LLRIQDDGTLLYTMRL 122
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 79 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 120
>gi|133778333|gb|AAI15079.1| Gabrb2 protein [Danio rerio]
Length = 519
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIPLNLTL-DNRVADQLWVPDTYFLNDKRSFVHGVTVKNR 137
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 138 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 169
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 107 DNRVADQLWVPDTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGL 151
>gi|4503867|ref|NP_000805.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Homo sapiens]
gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|182925|gb|AAA52511.1| GABA-alpha receptor beta-3 subunit [Homo sapiens]
gi|60654677|gb|AAX31903.1| gamma-aminobutyric acid [synthetic construct]
gi|60654679|gb|AAX31904.1| gamma-aminobutyric acid [synthetic construct]
gi|123980366|gb|ABM82012.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
gi|261861478|dbj|BAI47261.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|440913394|gb|ELR62847.1| Gamma-aminobutyric acid receptor subunit beta-2 [Bos grunniens
mutus]
Length = 484
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|345779584|ref|XP_858923.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
4 [Canis lupus familiaris]
Length = 442
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 77 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 135
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 136 LLRIQDDGTLLYTMRL 151
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 108 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 149
>gi|73953551|ref|XP_867140.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
8 [Canis lupus familiaris]
Length = 476
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|51491195|emb|CAH18663.1| hypothetical protein [Homo sapiens]
Length = 529
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 137 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 195
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 196 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 233
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 165 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 209
>gi|348575235|ref|XP_003473395.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Cavia porcellus]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|432949783|ref|XP_004084256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 517
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 76 DYTLTMYFQQAWRDKRLSYSEIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 134
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 135 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 166
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 104 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 148
>gi|426231655|ref|XP_004009854.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Ovis
aries]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|327260675|ref|XP_003215159.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Anolis carolinensis]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|281338656|gb|EFB14240.1| hypothetical protein PANDA_005233 [Ailuropoda melanoleuca]
Length = 428
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 63 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 121
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 122 LLRIQDDGTLLYTMRL 137
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 94 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 135
>gi|149726130|ref|XP_001503453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Equus caballus]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|157389018|ref|NP_000802.2| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Homo
sapiens]
gi|126302548|sp|Q16445.2|GBRA6_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|64654354|gb|AAH96242.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|64654801|gb|AAH96241.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563331|gb|AAH99641.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563375|gb|AAH99640.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|119581946|gb|EAW61542.1| gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|158259945|dbj|BAF82150.1| unnamed protein product [Homo sapiens]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|426353982|ref|XP_004044451.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Gorilla gorilla gorilla]
Length = 499
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|73953537|ref|XP_867070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Canis lupus familiaris]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|410957690|ref|XP_003985458.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2,
partial [Felis catus]
Length = 438
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 73 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 131
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 132 LLRIQDDGTLLYTMRL 147
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 104 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 145
>gi|397504702|ref|XP_003822922.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
paniscus]
Length = 490
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|335293402|ref|XP_003356953.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Sus scrofa]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|6679901|ref|NP_032092.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Mus
musculus]
gi|120757|sp|P26048.1|GBRA2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|193389|gb|AAA37650.1| GABA-A receptor alpha-2 subunit [Mus musculus]
gi|26333011|dbj|BAC30223.1| unnamed protein product [Mus musculus]
gi|92110217|gb|AAI15728.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 2 [Mus
musculus]
gi|148705860|gb|EDL37807.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 2 [Mus
musculus]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|226135|prf||1411303A GABA receptor alpha2
Length = 452
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|402873753|ref|XP_003900726.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Papio anubis]
Length = 529
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 137 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 195
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 196 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 233
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 165 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 209
>gi|332824532|ref|XP_527448.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
troglodytes]
Length = 490
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|301753443|ref|XP_002912563.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 476
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|297291324|ref|XP_001095465.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Macaca mulatta]
Length = 490
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|158260483|dbj|BAF82419.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|109079634|ref|XP_001086065.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Macaca
mulatta]
gi|402873304|ref|XP_003900519.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Papio
anubis]
gi|355691820|gb|EHH27005.1| hypothetical protein EGK_17099 [Macaca mulatta]
gi|355750394|gb|EHH54732.1| hypothetical protein EGM_15624 [Macaca fascicularis]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|4503865|ref|NP_000804.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 precursor
[Homo sapiens]
gi|114603232|ref|XP_001143967.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan troglodytes]
gi|114603234|ref|XP_001144033.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Pan troglodytes]
gi|297676569|ref|XP_002816203.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pongo abelii]
gi|297676571|ref|XP_002816204.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pongo abelii]
gi|332238931|ref|XP_003268656.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Nomascus leucogenys]
gi|332238935|ref|XP_003268658.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Nomascus leucogenys]
gi|332238937|ref|XP_003268659.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Nomascus leucogenys]
gi|390459183|ref|XP_002744173.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Callithrix jacchus]
gi|395817132|ref|XP_003782029.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Otolemur garnettii]
gi|397473112|ref|XP_003808064.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pan paniscus]
gi|397473116|ref|XP_003808066.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan paniscus]
gi|403287100|ref|XP_003934795.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287102|ref|XP_003934796.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Saimiri boliviensis boliviensis]
gi|426350875|ref|XP_004042989.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Gorilla gorilla gorilla]
gi|426350877|ref|XP_004042990.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Gorilla gorilla gorilla]
gi|455946|gb|AAB29370.1| gamma-aminobutyric acid A receptor beta 2 subunit [Homo sapiens]
gi|957261|gb|AAB33983.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|71043419|gb|AAH99705.1| GABRB2 protein [Homo sapiens]
gi|71043452|gb|AAH99719.1| GABRB2 protein [Homo sapiens]
gi|85662636|gb|AAI05640.1| GABRB2 protein [Homo sapiens]
gi|119581947|gb|EAW61543.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_a
[Homo sapiens]
gi|158260653|dbj|BAF82504.1| unnamed protein product [Homo sapiens]
gi|168277470|dbj|BAG10713.1| gamma-aminobutyric-acid receptor subunit beta-2 precursor
[synthetic construct]
gi|262527823|gb|ACY69097.1| gamma-aminobutyric acid A receptor beta 2 isoform 1 [Macaca
mulatta]
gi|380811400|gb|AFE77575.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 [Macaca
mulatta]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|431918110|gb|ELK17338.1| Gamma-aminobutyric acid receptor subunit beta-2 [Pteropus alecto]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|392583896|ref|NP_001254805.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Ovis
aries]
gi|387158480|gb|AFJ54221.1| gamma-aminobutyric acid A receptor [Ovis aries]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|296198773|ref|XP_002746862.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Callithrix jacchus]
Length = 490
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|291387761|ref|XP_002710400.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 476
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|195128399|ref|XP_002008651.1| GI11695 [Drosophila mojavensis]
gi|193920260|gb|EDW19127.1| GI11695 [Drosophila mojavensis]
Length = 710
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL TL L+ L + IWKP+ YF N K + +T PN
Sbjct: 170 YSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLAR-IWKPDTYFYNGKQSYLHTITTPNKF 228
Query: 83 VRINPDGEILY 93
VRI +G +LY
Sbjct: 229 VRIYQNGRVLY 239
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VRI +G +LY
Sbjct: 199 SMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLY 239
>gi|195022006|ref|XP_001985499.1| GH17092 [Drosophila grimshawi]
gi|193898981|gb|EDV97847.1| GH17092 [Drosophila grimshawi]
Length = 707
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL TL L+ L + IWKP+ YF N K + +T PN
Sbjct: 161 YSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLAR-IWKPDTYFYNGKQSYLHTITTPNKF 219
Query: 83 VRINPDGEILY 93
VRI +G +LY
Sbjct: 220 VRIYQNGRVLY 230
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VRI +G +LY
Sbjct: 190 SMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLY 230
>gi|149703013|ref|XP_001496146.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 [Equus
caballus]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|432098878|gb|ELK28373.1| Gamma-aminobutyric acid receptor subunit beta-2 [Myotis davidii]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|426350884|ref|XP_004042993.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Gorilla gorilla gorilla]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|402867638|ref|XP_003897948.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Papio anubis]
Length = 490
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|395855530|ref|XP_003800209.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Otolemur garnettii]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|348513619|ref|XP_003444339.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 475
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 11 VGRSLCTPAIE-------DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEV 63
VG S+ +I+ DY + +Y +Q W+D+RL + I L L D + +W P+
Sbjct: 63 VGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTL-DNRVADQLWVPDT 121
Query: 64 YFPNAKHAEFQYVTVPNVLVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
YF N K + VTV N ++R++PDG +LY L I +R LD
Sbjct: 122 YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|344279193|ref|XP_003411375.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Loxodonta africana]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|262527819|gb|ACY69095.1| gamma-aminobutyric acid A receptor beta 2 isoform 3 [Homo sapiens]
Length = 313
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 17 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 75
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 76 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 107
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 45 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 89
>gi|332238943|ref|XP_003268662.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Nomascus leucogenys]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|327260681|ref|XP_003215162.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 4 [Anolis carolinensis]
Length = 528
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|301763288|ref|XP_002917061.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Ailuropoda melanoleuca]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|55727657|emb|CAH90582.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|27806981|ref|NP_776966.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Bos
taurus]
gi|120756|sp|P10063.1|GBRA2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|369|emb|CAA30924.1| unnamed protein product [Bos taurus]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|297712706|ref|XP_002832881.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like,
partial [Pongo abelii]
Length = 150
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 1 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 59
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 60 LLRIQDDGTLLYTMRL 75
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 32 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 73
>gi|269914161|ref|NP_001161734.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Ornithorhynchus anatinus]
Length = 512
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|118403926|ref|NP_001072255.1| glycine receptor, beta precursor [Xenopus (Silurana) tropicalis]
gi|111305488|gb|AAI21238.1| glycine receptor, beta [Xenopus (Silurana) tropicalis]
Length = 497
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQ+W D RLK + + D DP + K +WKP+++F N K+A F VT
Sbjct: 100 DYRVNIFLRQRWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKNANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K+A F VT N+L+ I DG++L
Sbjct: 131 DPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDGDVL 172
>gi|432947468|ref|XP_004084026.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Oryzias latipes]
Length = 395
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S T D LVK IW P+++F ++K + T NV
Sbjct: 95 DFTMTLYLRHYWKDERLSFKSNTNQSMTFDGRLVKKIWVPDMFFVHSKKSFTHDTTKDNV 154
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 155 MLRVYPDGKVLYSLRVTVTAMCSMDLSRFPLDTQTCSL 192
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 124 DGRLVKKIWVPDMFFVHSKKSFTHDTTKDNVMLRVYPDGKVLYSL 168
>gi|403284717|ref|XP_003933704.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Saimiri boliviensis boliviensis]
Length = 511
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|148744735|gb|AAI42873.1| Unknown (protein for IMAGE:7452885) [Danio rerio]
Length = 427
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 82 DYTLTMYFQQAWRDKRLSYSEIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 140
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 141 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 172
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 110 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 154
>gi|426230034|ref|XP_004009088.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Ovis
aries]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|73954094|ref|XP_546263.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Canis
lupus familiaris]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|395817134|ref|XP_003782030.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Otolemur garnettii]
Length = 512
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|297676573|ref|XP_002816205.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pongo
abelii]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|291387763|ref|XP_002710401.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 4 [Oryctolagus
cuniculus]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|148673542|gb|EDL05489.1| mCG12769 [Mus musculus]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|167000751|ref|NP_000798.2| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Homo
sapiens]
gi|167000817|ref|NP_001107647.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Homo
sapiens]
gi|332819972|ref|XP_003310463.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Pan troglodytes]
gi|397490161|ref|XP_003816076.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Pan paniscus]
gi|426344236|ref|XP_004038680.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Gorilla gorilla gorilla]
gi|126302547|sp|P47869.2|GBRA2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|119613428|gb|EAW93022.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119613430|gb|EAW93024.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119613431|gb|EAW93025.1| gamma-aminobutyric acid (GABA) A receptor, alpha 2, isoform CRA_a
[Homo sapiens]
gi|158260347|dbj|BAF82351.1| unnamed protein product [Homo sapiens]
gi|168277582|dbj|BAG10769.1| gamma-aminobutyric-acid receptor subunit alpha-2 precursor
[synthetic construct]
gi|193785006|dbj|BAG54159.1| unnamed protein product [Homo sapiens]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|209413778|ref|NP_001129251.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Rattus
norvegicus]
Length = 452
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|402581144|gb|EJW75093.1| hypothetical protein WUBG_13999 [Wuchereria bancrofti]
Length = 169
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+EVD+YL W D+RL H+ L + +V +W+P++YF N+K A Q VT PN
Sbjct: 10 DFEVDMYLALGWYDRRLAHNCTHPVL-VTHKFIVDRLWQPDLYFVNSKFAYLQEVTTPNF 68
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDP-----------NLVKAIWKPE-VY 129
+V + PDG I + + + +R +D + NLV W + Y
Sbjct: 69 MVIVYPDGLIFKSMRLDVTLSCMMDLQRFPMDKQECPLIIQSYAYVENLVNLTWHEDPPY 128
Query: 130 FPNAKHAE 137
FP ++E
Sbjct: 129 FPFGSNSE 136
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
+V +W+P++YF N+K A Q VT PN +V + PDG I
Sbjct: 41 IVDRLWQPDLYFVNSKFAYLQEVTTPNFMVIVYPDGLIF 79
>gi|395849982|ref|XP_003797583.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Otolemur garnettii]
Length = 509
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 141 DFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 200
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 201 MLRVFPDGHVLYSMRI 216
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 170 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 214
>gi|332218614|ref|XP_003258449.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Nomascus leucogenys]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|149045579|gb|EDL98579.1| rCG55020, isoform CRA_b [Rattus norvegicus]
Length = 444
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 123 DFTMTLYLRHYWRDERLAFPSSSNRSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 182
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL-VKAIWKPEVY--FPNAKHAEF 138
++R+ PDG +LY + I LD +L +++ W +Y F +H F
Sbjct: 183 MLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESCWYNRLYINFTLRRHIFF 242
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 152 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 196
>gi|149035304|gb|EDL90008.1| similar to Gamma-aminobutyric-acid receptor alpha-2 subunit
precursor (GABA(A) receptor) [Rattus norvegicus]
Length = 367
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 2 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 60
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 61 LLRIQDDGTLLYTMRL 76
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 33 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 74
>gi|197098146|ref|NP_001124777.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Pongo
abelii]
gi|55725861|emb|CAH89710.1| hypothetical protein [Pongo abelii]
gi|55725875|emb|CAH89717.1| hypothetical protein [Pongo abelii]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|296486582|tpg|DAA28695.1| TPA: gamma-aminobutyric acid receptor subunit alpha-2 precursor
[Bos taurus]
Length = 285
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|301753447|ref|XP_002912565.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Ailuropoda melanoleuca]
gi|281345131|gb|EFB20715.1| hypothetical protein PANDA_000326 [Ailuropoda melanoleuca]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|402873751|ref|XP_003900725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Papio anubis]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|148277563|ref|NP_001019558.2| gamma-aminobutyric acid A receptor, beta 2 precursor [Danio rerio]
Length = 519
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 137
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 138 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 169
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 107 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 151
>gi|11140020|emb|CAC16086.1| GABAA receptor betaZ2 subunit [Danio rerio]
Length = 519
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 79 DYTLTMYFQQAWRDKRLSYSEIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 137
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 138 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 169
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 107 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 151
>gi|432880407|ref|XP_004073682.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2-like
[Oryzias latipes]
Length = 455
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W+D+RL H L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQSWKDERLTFHGPMNILPLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIKDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTM 158
>gi|2565315|gb|AAB81965.1| gamma-aminobutyric acid receptor rho2 subunit [Mus musculus]
Length = 465
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYL+ W+D+RL S + D LVK IW P+V+F ++K + Q T N+
Sbjct: 97 DFTMTLYLKHYWKDERLAFPSSSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIQDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + Q T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFIQDTTTDNIMLRVFPDGHVLYSM 170
>gi|355757709|gb|EHH61234.1| hypothetical protein EGM_19193 [Macaca fascicularis]
Length = 490
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|355561902|gb|EHH18534.1| hypothetical protein EGK_15160 [Macaca mulatta]
Length = 490
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 122 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 181
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 182 MLRVFPDGHVLYSMRI 197
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 151 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 195
>gi|334349706|ref|XP_001373416.2| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Monodelphis domestica]
Length = 428
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 60 EYTMTVFLHQSWRDGRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 118
Query: 82 LVRINPDGEILYMLSI 97
L+R+ P+G ILY + I
Sbjct: 119 LIRLQPNGVILYSIRI 134
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ P+G ILY +
Sbjct: 88 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILYSI 132
>gi|170040777|ref|XP_001848164.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864375|gb|EDS27758.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 618
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 YEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82
Y +D Y RQ W D+RL+ TL L+ +++ IWKP+ YF N K + +T PN
Sbjct: 124 YSMDCYFRQSWVDRRLEFKGAHDTLALS-ISMLGRIWKPDTYFYNGKQSYLHTITTPNKF 182
Query: 83 VRINPDGEILY 93
VR+ DG +LY
Sbjct: 183 VRLYQDGRVLY 193
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 118 NLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+++ IWKP+ YF N K + +T PN VR+ DG +LY
Sbjct: 153 SMLGRIWKPDTYFYNGKQSYLHTITTPNKFVRLYQDGRVLY 193
>gi|12548788|ref|NP_068712.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 2 precursor
[Homo sapiens]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|410915040|ref|XP_003970995.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 525
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 84 DYTLTMYFQQAWRDKRLSYSEIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 142
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 143 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 174
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 112 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 156
>gi|403287098|ref|XP_003934794.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Saimiri boliviensis boliviensis]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|296192673|ref|XP_002744174.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Callithrix jacchus]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|301753441|ref|XP_002912562.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Ailuropoda melanoleuca]
gi|281345130|gb|EFB20714.1| hypothetical protein PANDA_000325 [Ailuropoda melanoleuca]
Length = 512
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|149031468|gb|EDL86448.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Rattus norvegicus]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|387762508|ref|NP_001248597.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|402869280|ref|XP_003898691.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Papio anubis]
gi|402869282|ref|XP_003898692.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
2 [Papio anubis]
gi|209572895|sp|Q5RCC5.2|GBRA2_PONAB RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-2;
AltName: Full=GABA(A) receptor subunit alpha-2; Flags:
Precursor
gi|355687258|gb|EHH25842.1| GABA(A) receptor subunit alpha-2 [Macaca mulatta]
gi|355758702|gb|EHH61508.1| GABA(A) receptor subunit alpha-2 [Macaca fascicularis]
gi|380811390|gb|AFE77570.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|380811392|gb|AFE77571.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
gi|380811394|gb|AFE77572.1| gamma-aminobutyric acid receptor subunit alpha-2 precursor [Macaca
mulatta]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|84662774|ref|NP_001033790.1| gamma-aminobutyric acid receptor subunit beta-3 isoform b precursor
[Mus musculus]
gi|26350247|dbj|BAC38763.1| unnamed protein product [Mus musculus]
gi|148689913|gb|EDL21860.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Mus musculus]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|441663576|ref|XP_004091688.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2
[Nomascus leucogenys]
Length = 511
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|12548785|ref|NP_068711.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 1 precursor
[Homo sapiens]
gi|270047479|ref|NP_001161800.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Macaca
mulatta]
gi|114603228|ref|XP_001143894.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan troglodytes]
gi|297676567|ref|XP_002816202.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pongo abelii]
gi|332238939|ref|XP_003268660.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
5 [Nomascus leucogenys]
gi|397473114|ref|XP_003808065.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan paniscus]
gi|403287104|ref|XP_003934797.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Saimiri boliviensis boliviensis]
gi|426350879|ref|XP_004042991.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Gorilla gorilla gorilla]
gi|292495010|sp|P47870.2|GBRB2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|292630773|sp|D1LYT2.1|GBRB2_MACMU RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|957259|gb|AAB33982.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|119581948|gb|EAW61544.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_b
[Homo sapiens]
gi|262527821|gb|ACY69096.1| gamma-aminobutyric acid A receptor beta 2 isoform 2 [Macaca
mulatta]
gi|351696717|gb|EHA99635.1| Gamma-aminobutyric acid receptor subunit beta-2 [Heterocephalus
glaber]
gi|355691818|gb|EHH27003.1| hypothetical protein EGK_17097 [Macaca mulatta]
gi|355750393|gb|EHH54731.1| hypothetical protein EGM_15623 [Macaca fascicularis]
gi|1095323|prf||2108344A GABA-A receptor:SUBUNIT=beta2
Length = 512
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|149726128|ref|XP_001503458.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Equus caballus]
Length = 512
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|327260677|ref|XP_003215160.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Anolis carolinensis]
Length = 511
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>gi|291385732|ref|XP_002709460.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 2
precursor-like [Oryctolagus cuniculus]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|194206378|ref|XP_001493125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Equus caballus]
Length = 473
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>gi|402869284|ref|XP_003898693.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
3 [Papio anubis]
Length = 511
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|386422|gb|AAB27278.1| gamma-aminobutyric acidA receptor alpha 2 subunit [Homo sapiens]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|2565313|gb|AAB81964.1| gamma-aminobutyric acid receptor rho1 subunit [Mus musculus]
Length = 474
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 112 DFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 171
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 172 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 209
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 141 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 185
>gi|403284715|ref|XP_003933703.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-2 isoform
1 [Saimiri boliviensis boliviensis]
Length = 451
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ + IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 119 LVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 117 MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>gi|338713090|ref|XP_003362822.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Equus
caballus]
Length = 411
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 17 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 75
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 76 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 107
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 45 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 89
>gi|221136860|ref|NP_001137557.1| gamma-aminobutyric acid receptor subunit alpha-6 [Bos taurus]
gi|296485091|tpg|DAA27206.1| TPA: gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Bos
taurus]
gi|440913395|gb|ELR62848.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Bos grunniens
mutus]
Length = 453
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQ W D+RLK T+ L LN+ +V IW P+ +F N K + +T PN
Sbjct: 76 EYTMDVFFRQTWTDERLKFGGPTEILSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNK 134
Query: 82 LVRINPDGEILYMLSIIEN 100
L RI +G ILY + + N
Sbjct: 135 LFRIMQNGTILYTMRLTIN 153
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 112 LDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
L LN+ +V IW P+ +F N K + +T PN L RI +G ILY +
Sbjct: 101 LSLNN-LMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTM 148
>gi|410960768|ref|XP_003986959.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Felis
catus]
Length = 447
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 55 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 113
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 114 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 151
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 83 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 127
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,746,035,982
Number of Sequences: 23463169
Number of extensions: 112257620
Number of successful extensions: 233614
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2010
Number of HSP's successfully gapped in prelim test: 431
Number of HSP's that attempted gapping in prelim test: 227232
Number of HSP's gapped (non-prelim): 4827
length of query: 160
length of database: 8,064,228,071
effective HSP length: 122
effective length of query: 38
effective length of database: 9,496,688,749
effective search space: 360874172462
effective search space used: 360874172462
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)