BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10725
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q09453|GLRB4_CAEEL Glycine receptor subunit beta-type 4 OS=Caenorhabditis elegans
GN=ggr-1 PE=3 SV=2
Length = 473
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFP 66
Q + G S D++VD+Y ++KW D RL+H++ TK + + DP L +W P++YF
Sbjct: 71 QMYIEGMSSFHAQSMDFQVDIYFQEKWVDHRLQHNN-TKRILVKDPKLFGLLWHPDLYFA 129
Query: 67 NAKHAEFQYVTVPNVLVRINPDGEILY 93
NA+ A F VT PN LV I P+G + Y
Sbjct: 130 NARTASFHDVTQPNFLVWIYPNGTVWY 156
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
K + + DP L +W P++YF NA+ A F VT PN LV I P+G + Y
Sbjct: 108 KRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNFLVWIYPNGTVWY 156
>sp|P27681|GBRG3_MOUSE Gamma-aminobutyric acid receptor subunit gamma-3 OS=Mus musculus
GN=Gabrg3 PE=2 SV=2
Length = 467
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>sp|P28473|GBRG3_RAT Gamma-aminobutyric acid receptor subunit gamma-3 OS=Rattus
norvegicus GN=Gabrg3 PE=2 SV=1
Length = 467
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>sp|Q99928|GBRG3_HUMAN Gamma-aminobutyric acid receptor subunit gamma-3 OS=Homo sapiens
GN=GABRG3 PE=2 SV=2
Length = 467
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y++D++ Q W D RL+ +S K L LN N+V IW P+ F N+K AE ++T PN
Sbjct: 91 EYQIDIFFAQTWTDSRLRFNSTMKILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQ 149
Query: 82 LVRINPDGEILYMLSIIEN 100
L+RI DG+ILY L + N
Sbjct: 150 LLRIWNDGKILYTLRLTIN 168
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ F N+K AE ++T PN L+RI DG+ILY L
Sbjct: 114 KILTLNS-NMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTL 163
>sp|P34904|GBRG4_CHICK Gamma-aminobutyric acid receptor subunit gamma-4 OS=Gallus gallus
GN=GABRG4 PE=2 SV=1
Length = 457
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RL+ +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 93 EYTIDIFFAQTWYDRRLRFNSTLKALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQ 151
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG++LY L +
Sbjct: 152 LLRIWNDGKVLYTLRL 167
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
KAL LN N+V IW P+ +F N+K A+ ++T PN L+RI DG++LY L
Sbjct: 116 KALTLNT-NMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTL 165
>sp|P23416|GLRA2_HUMAN Glycine receptor subunit alpha-2 OS=Homo sapiens GN=GLRA2 PE=2 SV=1
Length = 452
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>sp|P22771|GLRA2_RAT Glycine receptor subunit alpha-2 OS=Rattus norvegicus GN=Glra2 PE=1
SV=1
Length = 452
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>sp|Q7TNC8|GLRA2_MOUSE Glycine receptor subunit alpha-2 OS=Mus musculus GN=Glra2 PE=2 SV=1
Length = 452
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 86 TETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHD 144
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI+ +G++LY + +
Sbjct: 145 VTTDNKLLRISKNGKVLYSIRL 166
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G++LY +
Sbjct: 116 SLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 164
>sp|P21548|GBRG2_CHICK Gamma-aminobutyric acid receptor subunit gamma-2 OS=Gallus gallus
GN=GABRG2 PE=2 SV=1
Length = 474
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>sp|P22723|GBRG2_MOUSE Gamma-aminobutyric acid receptor subunit gamma-2 OS=Mus musculus
GN=Gabrg2 PE=1 SV=3
Length = 474
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>sp|P18508|GBRG2_RAT Gamma-aminobutyric acid receptor subunit gamma-2 OS=Rattus
norvegicus GN=Gabrg2 PE=1 SV=1
Length = 466
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 109 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 167
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 168 MLRIWNDGRVLYTLRL 183
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 132 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 181
>sp|P22300|GBRG2_BOVIN Gamma-aminobutyric acid receptor subunit gamma-2 OS=Bos taurus
GN=GABRG2 PE=2 SV=1
Length = 475
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFGQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>sp|Q5REA1|GBRG2_PONAB Gamma-aminobutyric acid receptor subunit gamma-2 OS=Pongo abelii
GN=GABRG2 PE=2 SV=1
Length = 467
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>sp|P18507|GBRG2_HUMAN Gamma-aminobutyric acid receptor subunit gamma-2 OS=Homo sapiens
GN=GABRG2 PE=1 SV=2
Length = 467
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ Q W D+RLK +S K L LN N+V IW P+ +F N+K A+ ++T PN
Sbjct: 110 EYTIDIFFAQTWYDRRLKFNSTIKVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNR 168
Query: 82 LVRINPDGEILYMLSI 97
++RI DG +LY L +
Sbjct: 169 MLRIWNDGRVLYTLRL 184
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 110 KALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K L LN N+V IW P+ +F N+K A+ ++T PN ++RI DG +LY L
Sbjct: 133 KVLRLNS-NMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTL 182
>sp|P57695|GLRA1_BOVIN Glycine receptor subunit alpha-1 OS=Bos taurus GN=GLRA1 PE=2 SV=1
Length = 457
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>sp|O93430|GLRA1_DANRE Glycine receptor subunit alphaZ1 OS=Danio rerio GN=glra1 PE=2 SV=1
Length = 444
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 81 DYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 139
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 140 KLLRISKNGNVLYSIRI 156
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI+ +G +LY
Sbjct: 106 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY 152
>sp|P07727|GLRA1_RAT Glycine receptor subunit alpha-1 OS=Rattus norvegicus GN=Glra1 PE=1
SV=4
Length = 457
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>sp|Q64018|GLRA1_MOUSE Glycine receptor subunit alpha-1 OS=Mus musculus GN=Glra1 PE=1 SV=2
Length = 457
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>sp|P23415|GLRA1_HUMAN Glycine receptor subunit alpha-1 OS=Homo sapiens GN=GLRA1 PE=1 SV=2
Length = 457
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQ+W D RL ++ +LDL DP+++ +IWKP+++F N K A F +T N
Sbjct: 85 DYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDN 143
Query: 81 VLVRINPDGEILYMLSI 97
L+RI+ +G +LY + I
Sbjct: 144 KLLRISRNGNVLYSIRI 160
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F +T N L+RI+ +G +LY
Sbjct: 110 SLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLY 156
>sp|P24524|GLRA3_RAT Glycine receptor subunit alpha-3 OS=Rattus norvegicus GN=Glra3 PE=2
SV=1
Length = 464
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>sp|Q91XP5|GLRA3_MOUSE Glycine receptor subunit alpha-3 OS=Mus musculus GN=Glra3 PE=2 SV=2
Length = 464
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>sp|O75311|GLRA3_HUMAN Glycine receptor subunit alpha-3 OS=Homo sapiens GN=GLRA3 PE=2 SV=2
Length = 464
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPN 80
DY V+++LRQKW D RL + +LDL DP+++ +IWKP+++F N K A F VT N
Sbjct: 90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDN 148
Query: 81 VLVRINPDGEILYMLSI 97
L+RI +G +LY + +
Sbjct: 149 KLLRIFKNGNVLYSIRL 165
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 111 ALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
+LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 115 SLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>sp|P23574|GBRG1_RAT Gamma-aminobutyric acid receptor subunit gamma-1 OS=Rattus
norvegicus GN=Gabrg1 PE=2 SV=1
Length = 465
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWSDGRVLYTLRLTIN 185
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 180
>sp|Q9R0Y8|GBRG1_MOUSE Gamma-aminobutyric acid receptor subunit gamma-1 OS=Mus musculus
GN=Gabrg1 PE=2 SV=2
Length = 465
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWSDGRVLYTLRLTIN 185
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTL 180
>sp|Q5JXX5|GLRA4_HUMAN Glycine receptor subunit alpha-4 OS=Homo sapiens GN=GLRA4 PE=2 SV=3
Length = 417
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 14 SLCTPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAE 72
S T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A
Sbjct: 83 SSITKTTMDYRVNVFLRQQWNDPRLSYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGAN 141
Query: 73 FQYVTVPNVLVRINPDGEILYMLSI 97
F VT N L+RI +G +LY + +
Sbjct: 142 FHEVTTDNKLLRIFKNGNVLYSIRL 166
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 110 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 162
>sp|Q61603|GLRA4_MOUSE Glycine receptor subunit alpha-4 OS=Mus musculus GN=Glra4 PE=2 SV=3
Length = 456
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 17 TPAIEDYEVDLYLRQKWQDQRLKHHSI-TKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQY 75
T DY V+++LRQ+W D RL + +LDL DP+++ +IWKP+++F N K A F
Sbjct: 85 TETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHE 143
Query: 76 VTVPNVLVRINPDGEILYMLSI 97
VT N L+RI +G +LY + +
Sbjct: 144 VTTDNKLLRIFKNGNVLYSIRL 165
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 105 RKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158
R+ +LDL DP+++ +IWKP+++F N K A F VT N L+RI +G +LY
Sbjct: 109 REYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 161
>sp|Q8N1C3|GBRG1_HUMAN Gamma-aminobutyric acid receptor subunit gamma-1 OS=Homo sapiens
GN=GABRG1 PE=2 SV=2
Length = 465
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 18 PAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVT 77
P +Y +D+ Q W D RLK +S K L LN N+V IW P+ +F N++ ++ ++T
Sbjct: 104 PINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWIT 162
Query: 78 VPNVLVRINPDGEILYMLSIIEN 100
PN L+RI DG +LY L + N
Sbjct: 163 TPNRLLRIWNDGRVLYTLRLTIN 185
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN N+V IW P+ +F N++ ++ ++T PN L+RI DG +LY L
Sbjct: 125 KFNSTMKVLMLNS-NMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTL 180
>sp|P20781|GLRB_RAT Glycine receptor subunit beta OS=Rattus norvegicus GN=Glrb PE=1
SV=1
Length = 496
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>sp|P48168|GLRB_MOUSE Glycine receptor subunit beta OS=Mus musculus GN=Glrb PE=1 SV=2
Length = 496
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>sp|O14764|GBRD_HUMAN Gamma-aminobutyric acid receptor subunit delta OS=Homo sapiens
GN=GABRD PE=1 SV=2
Length = 452
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSIIEN 100
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRITST 161
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>sp|Q9GJS9|GLRB_BOVIN Glycine receptor subunit beta OS=Bos taurus GN=GLRB PE=2 SV=1
Length = 497
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEILYMLSI 97
N+L+ I DG++L + +
Sbjct: 160 NILLFIFRDGDVLVSMRL 177
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>sp|P22933|GBRD_MOUSE Gamma-aminobutyric acid receptor subunit delta OS=Mus musculus
GN=Gabrd PE=2 SV=1
Length = 449
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRI 158
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>sp|P18506|GBRD_RAT Gamma-aminobutyric acid receptor subunit delta OS=Rattus norvegicus
GN=Gabrd PE=2 SV=2
Length = 449
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y + ++L Q W+D RL ++ +TL L D V +W P+ + NAK A F VTV N
Sbjct: 84 EYTMTVFLHQSWRDSRLSYNHTNETLGL-DSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 142
Query: 82 LVRINPDGEILYMLSI 97
L+R+ PDG ILY + I
Sbjct: 143 LIRLQPDGVILYSIRI 158
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D V +W P+ + NAK A F VTV N L+R+ PDG ILY +
Sbjct: 112 DSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSI 156
>sp|P48167|GLRB_HUMAN Glycine receptor subunit beta OS=Homo sapiens GN=GLRB PE=1 SV=1
Length = 497
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLD--LNDPNLVKAIWKPEVYFPNAKHAEFQYVTVP 79
DY V+++LRQKW D RLK S + D DP + K +WKP+++F N K A F VT
Sbjct: 100 DYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQE 159
Query: 80 NVLVRINPDGEIL 92
N+L+ I DG++L
Sbjct: 160 NILLFIFRDGDVL 172
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEIL 157
DP + K +WKP+++F N K A F VT N+L+ I DG++L
Sbjct: 131 DPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>sp|P23576|GBRA2_RAT Gamma-aminobutyric acid receptor subunit alpha-2 OS=Rattus
norvegicus GN=Gabra2 PE=2 SV=1
Length = 451
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
+Y +D++ RQKW+D+RLK L LN+ ++ IW P+ +F N K + +T+PN
Sbjct: 86 EYTIDVFFRQKWKDERLKFKGPMNILRLNN-SMASKIWTPDTFFHNGKKSVAHNMTMPNK 144
Query: 82 LVRINPDGEILYMLSI 97
L+RI DG +LY + +
Sbjct: 145 LLRIQDDGTLLYTMRL 160
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 104 KRKQKRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
K K L LN+ ++ IW P+ +F N K + +T+PN L+RI DG +LY +
Sbjct: 103 KFKGPMNILRLNN-SMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTM 158
>sp|P24045|GBRB4_CHICK Gamma-aminobutyric acid receptor subunit beta-4 OS=Gallus gallus
GN=GABRB4 PE=2 SV=1
Length = 488
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ + L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTITMYFQQSWRDKRLAYNDLPLNLTL-DNRVADQLWLPDTYFLNDKKSFLHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTL 176
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGL 152
>sp|P50573|GBRR3_RAT Gamma-aminobutyric acid receptor subunit rho-3 OS=Rattus norvegicus
GN=Gabrr3 PE=1 SV=1
Length = 464
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + YLR W+D+RL S T D L++ IW P+++F ++K + TV N+
Sbjct: 100 DFTMTFYLRHYWKDERLSFPSTTNKSMTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENI 159
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +L+ L I + R LD + +L
Sbjct: 160 MLRVHPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSL 197
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D L++ IW P+++F ++K + TV N+++R++PDG +L+ L
Sbjct: 129 DRRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSL 173
>sp|P08220|GBRB1_BOVIN Gamma-aminobutyric acid receptor subunit beta-1 OS=Bos taurus
GN=GABRB1 PE=2 SV=1
Length = 474
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>sp|P18505|GBRB1_HUMAN Gamma-aminobutyric acid receptor subunit beta-1 OS=Homo sapiens
GN=GABRB1 PE=2 SV=2
Length = 474
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>sp|P15431|GBRB1_RAT Gamma-aminobutyric acid receptor subunit beta-1 OS=Rattus
norvegicus GN=Gabrb1 PE=2 SV=1
Length = 474
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>sp|P50571|GBRB1_MOUSE Gamma-aminobutyric acid receptor subunit beta-1 OS=Mus musculus
GN=Gabrb1 PE=1 SV=1
Length = 474
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQSWKDKRLSYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R++PDG +LY L I +R LD + L
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 177
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>sp|Q0II76|GBRR2_BOVIN Gamma-aminobutyric acid receptor subunit rho-2 OS=Bos taurus
GN=GABRR2 PE=2 SV=4
Length = 465
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG++LY + I
Sbjct: 157 MLRVFPDGQVLYSMRI 172
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG++LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSM 170
>sp|P0C2W5|GBRB2_BOVIN Gamma-aminobutyric acid receptor subunit beta-2 (Fragment) OS=Bos
taurus GN=GABRB2 PE=1 SV=1
Length = 472
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 78 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 136
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 137 MIRLHPDGTVLYGLRITTTTACMMDLRRYPLD 168
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 106 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 150
>sp|P50572|GBRR1_RAT Gamma-aminobutyric acid receptor subunit rho-1 OS=Rattus norvegicus
GN=Gabrr1 PE=1 SV=2
Length = 480
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 118 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 177
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 178 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 215
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 147 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 191
>sp|P28476|GBRR2_HUMAN Gamma-aminobutyric acid receptor subunit rho-2 OS=Homo sapiens
GN=GABRR2 PE=2 SV=5
Length = 465
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S + D LVK IW P+V+F ++K + T N+
Sbjct: 97 DFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNI 156
Query: 82 LVRINPDGEILYMLSI 97
++R+ PDG +LY + I
Sbjct: 157 MLRVFPDGHVLYSMRI 172
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+V+F ++K + T N+++R+ PDG +LY +
Sbjct: 126 DGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSM 170
>sp|P24046|GBRR1_HUMAN Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapiens
GN=GABRR1 PE=2 SV=2
Length = 479
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
D+ + LYLR W+D+RL S D LVK IW P+++F ++K + T NV
Sbjct: 117 DFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNV 176
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALDLNDPNL 119
++R+ PDG++LY L + R LD +L
Sbjct: 177 MLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSL 214
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D LVK IW P+++F ++K + T NV++R+ PDG++LY L
Sbjct: 146 DGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSL 190
>sp|P63138|GBRB2_RAT Gamma-aminobutyric acid receptor subunit beta-2 OS=Rattus
norvegicus GN=Gabrb2 PE=1 SV=1
Length = 474
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL ++ I L L D + +W P+ YF N K + VTV N
Sbjct: 80 DYTLTMYFQQAWRDKRLSYNVIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 138
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 139 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 170
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 108 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 152
>sp|P63079|GBRB3_RAT Gamma-aminobutyric acid receptor subunit beta-3 OS=Rattus
norvegicus GN=Gabrb3 PE=1 SV=1
Length = 473
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>sp|P63080|GBRB3_MOUSE Gamma-aminobutyric acid receptor subunit beta-3 OS=Mus musculus
GN=Gabrb3 PE=2 SV=1
Length = 473
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
>sp|P28472|GBRB3_HUMAN Gamma-aminobutyric acid receptor subunit beta-3 OS=Homo sapiens
GN=GABRB3 PE=1 SV=1
Length = 473
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 22 DYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81
DY + +Y +Q W+D+RL + I L L D + +W P+ YF N K + VTV N
Sbjct: 81 DYTLTMYFQQYWRDKRLAYSGIPLNLTL-DNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 139
Query: 82 LVRINPDGEILYMLSIIENNTNKRKQKRKALD 113
++R++PDG +LY L I +R LD
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLD 171
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 116 DPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYML 160
D + +W P+ YF N K + VTV N ++R++PDG +LY L
Sbjct: 109 DNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,048,757
Number of Sequences: 539616
Number of extensions: 2675507
Number of successful extensions: 5822
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5496
Number of HSP's gapped (non-prelim): 248
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)