Query psy10725
Match_columns 160
No_of_seqs 209 out of 1067
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 16:58:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10725.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10725hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qc1_B Acetylcholine receptor 99.9 6.3E-23 2.2E-27 156.3 7.9 115 6-126 34-163 (212)
2 2wn9_A Soluble acetylcholine r 99.9 4.7E-23 1.6E-27 158.7 7.2 113 7-126 43-169 (228)
3 3rhw_A Avermectin-sensitive gl 99.9 1.4E-22 4.8E-27 164.5 9.8 117 7-126 33-164 (347)
4 3igq_A GLR4197 protein; plgic 99.9 8E-23 2.7E-27 154.8 6.9 101 6-114 20-130 (201)
5 4afh_A ACHBP; acetylcholine-bi 99.9 1.9E-22 6.5E-27 155.6 8.2 114 7-126 39-166 (230)
6 2bj0_A Acetylcholine-binding p 99.9 2.4E-22 8.3E-27 152.1 8.3 114 6-127 29-156 (203)
7 1uw6_A Acetylcholine-binding p 99.9 3.3E-22 1.1E-26 152.3 8.7 114 7-127 33-158 (211)
8 4aoe_A Acetylcholine-binding p 99.9 3E-22 1E-26 152.0 8.4 102 6-114 33-143 (205)
9 4aod_A Acetylcholine-binding p 99.9 4.2E-22 1.4E-26 151.2 8.3 101 6-114 33-143 (205)
10 3sq6_A ACHBP, neuronal acetylc 99.9 5.8E-22 2E-26 150.3 8.3 100 6-114 31-142 (204)
11 3tlw_A GLR4197 protein, GLIC; 99.9 1E-21 3.5E-26 157.8 8.4 104 6-114 24-134 (321)
12 2bg9_C Acetylcholine receptor 99.8 2.6E-21 9E-26 158.3 8.6 103 6-114 35-148 (369)
13 2bg9_A Acetylcholine receptor 99.8 2.4E-21 8.2E-26 158.6 7.6 102 7-114 34-146 (370)
14 2bg9_B Acetylcholine receptor 99.8 2.7E-21 9.4E-26 158.3 7.8 102 7-114 34-146 (370)
15 2bg9_E Acetylcholine receptor 99.8 3.1E-21 1.1E-25 157.9 7.7 116 6-127 32-162 (370)
16 4aq5_A Acetylcholine receptor 99.8 5.5E-21 1.9E-25 160.5 7.7 102 7-114 58-170 (461)
17 4aq5_C Acetylcholine receptor 99.8 1.2E-20 4E-25 160.6 8.7 103 6-114 56-169 (522)
18 4aq5_E Acetylcholine receptor 99.8 8.4E-21 2.9E-25 160.4 7.1 103 6-114 32-145 (488)
19 3rqw_A ELIC pentameric ligand 99.8 2.3E-20 7.8E-25 150.0 8.9 103 6-114 16-130 (322)
20 4aq5_B Acetylcholine receptor 99.8 1.2E-20 4E-25 159.7 6.5 102 7-114 58-170 (493)
21 3rhw_A Avermectin-sensitive gl 98.8 1E-08 3.5E-13 82.8 7.2 69 88-159 44-121 (347)
22 2wn9_A Soluble acetylcholine r 98.7 2.3E-08 7.8E-13 76.5 5.4 65 88-159 54-127 (228)
23 2qc1_B Acetylcholine receptor 98.6 4.9E-08 1.7E-12 73.7 6.5 66 88-159 46-120 (212)
24 2bj0_A Acetylcholine-binding p 98.6 7.6E-08 2.6E-12 72.2 6.5 64 88-159 41-113 (203)
25 3rqw_A ELIC pentameric ligand 98.5 9.1E-08 3.1E-12 76.4 5.9 67 88-159 28-103 (322)
26 1uw6_A Acetylcholine-binding p 98.5 1.5E-07 5E-12 71.1 6.5 64 88-159 44-115 (211)
27 4afh_A ACHBP; acetylcholine-bi 98.5 3.9E-07 1.3E-11 69.8 8.7 64 90-159 56-128 (230)
28 3igq_A GLR4197 protein; plgic 98.5 1.1E-07 3.9E-12 71.3 4.5 66 89-159 33-103 (201)
29 2bg9_C Acetylcholine receptor 98.5 2.6E-07 8.9E-12 75.3 6.6 66 88-159 47-121 (369)
30 2bg9_E Acetylcholine receptor 98.5 2.7E-07 9.3E-12 75.1 6.6 66 88-159 44-118 (370)
31 3tlw_A GLR4197 protein, GLIC; 98.5 2E-07 7E-12 74.3 5.7 67 88-159 36-107 (321)
32 2bg9_A Acetylcholine receptor 98.4 2.3E-07 7.9E-12 75.5 5.9 66 88-159 45-119 (370)
33 2bg9_B Acetylcholine receptor 98.4 2.8E-07 9.7E-12 75.0 5.7 66 88-159 45-119 (370)
34 3sq6_A ACHBP, neuronal acetylc 98.4 5.5E-07 1.9E-11 67.6 6.1 63 88-159 43-116 (204)
35 4aq5_C Acetylcholine receptor 98.2 1.7E-06 5.7E-11 73.6 6.2 65 89-159 69-142 (522)
36 4aod_A Acetylcholine-binding p 98.2 1.7E-06 5.8E-11 65.1 5.5 65 88-159 45-117 (205)
37 4aq5_A Acetylcholine receptor 98.2 1.1E-06 3.8E-11 73.6 4.7 66 88-159 69-143 (461)
38 4aq5_E Acetylcholine receptor 98.2 1.5E-06 5E-11 73.3 4.9 65 89-159 45-118 (488)
39 4aq5_B Acetylcholine receptor 98.2 2.5E-06 8.5E-11 72.0 6.1 66 88-159 69-143 (493)
40 4aoe_A Acetylcholine-binding p 98.1 2.9E-06 1E-10 63.8 5.6 65 88-159 45-117 (205)
41 3ol0_A De novo designed monome 44.6 11 0.00038 21.2 1.6 13 145-157 16-28 (48)
42 3d8m_A BPP, baseplate protein, 36.9 39 0.0013 24.0 3.8 37 122-158 106-144 (165)
43 3da0_A Cleaved chimeric recept 29.4 66 0.0023 22.0 3.8 39 120-158 72-112 (136)
44 1zru_A Lactophage P2 receptor 22.0 94 0.0032 23.6 3.8 39 120-158 203-243 (264)
45 3fcg_A F1 capsule-anchoring pr 21.7 87 0.003 19.8 3.1 25 135-159 16-40 (90)
46 2f0c_A Phage TP901-1 ORF49 (BP 21.5 82 0.0028 22.8 3.3 39 120-158 132-172 (191)
No 1
>2qc1_B Acetylcholine receptor subunit alpha; nicotinic acetylcholine receptor, glycosylated protein, beta sandwich, Cys-loop, buried hydrophilic residues; HET: NAG MAN; 1.94A {Mus musculus} PDB: 1l4w_B 1ljz_B
Probab=99.88 E-value=6.3e-23 Score=156.33 Aligned_cols=115 Identities=19% Similarity=0.289 Sum_probs=93.4
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~ 81 (160)
+++.+.+|.+|+|++|+|++++|++|+|.|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|.... .
T Consensus 34 ~~~~l~~i~~v~e~~~~~~~~~~~~~~W~D~rL~w~~~~~~~i~~l~~-~---~~~iW~PDi~~~N~~~~~~~~~~~--~ 107 (212)
T 2qc1_B 34 VGLQLIQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHI-P---SEKIWRPDVVLYNNADGDFAIVKF--T 107 (212)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECTTCCCCGGGGTTCCEEEE-C---GGGSCCCCEEECCBTTTSSCEECC--C
T ss_pred EEEEEecccccccCCcEEEEEEEEeeEEECCCcccChhhcCCeeEEEc-c---hhhccCCceeccccccccccccce--e
Confidence 345568999999999999999999999999999999863 56777 4 799999999999999999987654 4
Q ss_pred EEEEeeCCceeEEEeEEEeecccc-------ccccceeeCC----Chhhhcccccc
Q psy10725 82 LVRINPDGEILYMLSIIENNTNKR-------KQKRKALDLN----DPNLVKAIWKP 126 (160)
Q Consensus 82 ~~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l~----~~~~~~~iW~P 126 (160)
.++|+++|+|.|..|+.++++|.+ +.+.|.+.++ +.+-+...|..
T Consensus 108 ~~~v~~~G~V~~~~~~~~~~~C~mdl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~ 163 (212)
T 2qc1_B 108 KVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTRTYDGSAVAINPES 163 (212)
T ss_dssp CEEEETTCEEEECCEEEEEEEEEECCSSSSCCEEEEEEEEEESSCCTTTEEEEESC
T ss_pred eEEEECCeeEEEEeeeEEEEEccceeecCCCCceEEeEEEEcccccCceEEEEecc
Confidence 688999999999999999999974 4456666542 23444455643
No 2
>2wn9_A Soluble acetylcholine receptor; 4-0H-DMXBA, acetylcholine binding protein; HET: ZY5 NAG BMA MAN; 1.75A {Aplysia californica} PDB: 2wnj_A* 2wzy_A* 2x00_A* 3peo_A* 2pgz_A* 2ph9_A* 4dbm_A* 3c84_A* 2byq_A* 2byr_A* 2bys_A* 2wnc_A* 2wnl_A* 3c79_A* 2byn_A* 3pmz_A* 2x00_D* 2xnv_A* 2xnt_A* 2xnu_A* ...
Probab=99.88 E-value=4.7e-23 Score=158.75 Aligned_cols=113 Identities=10% Similarity=0.144 Sum_probs=92.1
Q ss_pred eeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 7 ~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
.+.+.+|.+|+|++|+|++++|++|+|.|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|.. +..
T Consensus 43 ~~~l~~i~~v~e~~~~~~~~~~l~~~W~D~rL~w~~~~y~~i~~l~~-~---~~~IW~PDi~l~N~~~~~~~~~---~~~ 115 (228)
T 2wn9_A 43 GFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRT-S---AADIWTPDITAYSSTRPVQVLS---PQI 115 (228)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECCGGGGTTCCEEEE-E---GGGSCCCCEEESSBSSCCEECS---CCE
T ss_pred EEEhhHhhhhhccccEEEEEEEEEEEEECCCccCCchhcCCeeEEEe-c---HHHccCCceecccccccccccc---cce
Confidence 44558999999999999999999999999999999873 46677 3 7899999999999999998763 788
Q ss_pred EEEeeCCceeEEEeEEEeeccc---cc---cccceeeCC----Chhhhcccccc
Q psy10725 83 VRINPDGEILYMLSIIENNTNK---RK---QKRKALDLN----DPNLVKAIWKP 126 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~---~~---~~~~~l~l~----~~~~~~~iW~P 126 (160)
++|+++|+|.|+.|+.++++|. ++ .+.|.+.++ +.+-+...|..
T Consensus 116 v~i~~~G~V~~~~~~~~~~~C~~~~mdl~D~Q~C~l~f~Sw~y~~~~i~l~~~~ 169 (228)
T 2wn9_A 116 AVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDT 169 (228)
T ss_dssp EEEETEEEEEECCEEEEEEECCCTTTTSTTCEEEEEEEEESSCCTTTEEEECSC
T ss_pred EEEeCCeEEEEeCCEEEEEECCCCCCCCCcCcEeeEEEEeecccccEEEEEecC
Confidence 9999999999999999999999 52 344444332 24445556654
No 3
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=99.88 E-value=1.4e-22 Score=164.52 Aligned_cols=117 Identities=29% Similarity=0.449 Sum_probs=96.1
Q ss_pred eeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 7 ~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
.+.+.+|.+++|++|+|++++|++|+|+|+||+|++.+ +.+.+.+ .++||+||++|+|++++.+|..+.+|..
T Consensus 33 ~l~l~~i~~vde~~~~~t~~~~l~~~W~D~rL~w~p~~~~~~~~l~~~~---~~~IW~PDi~l~N~~~~~~~~~~~~n~~ 109 (347)
T 3rhw_A 33 NMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTV---GHQIWMPDTFFPNEKQAYKHTIDKPNVL 109 (347)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEEECGGGCSSTTCSSSCSEEECCT---TCCCCCCCEECTTEEEEEECCSSSCSEE
T ss_pred EEEEEeeccccccceeEEEEEEEeeEEECcccCCCCccCCCceEEEecc---hhceecCCEeeeccccccccccccccEE
Confidence 45568999999999999999999999999999998763 3455522 5999999999999999999988888999
Q ss_pred EEEeeCCceeEEEeEEEeecccc-------ccccceeeCC----Chhhhcccccc
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR-------KQKRKALDLN----DPNLVKAIWKP 126 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l~----~~~~~~~iW~P 126 (160)
++|++||+|.|..|+.++++|.+ |.+.|.+.++ +.+.+.-.|..
T Consensus 110 v~i~~~G~V~~~~~~~~~s~C~~dl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~ 164 (347)
T 3rhw_A 110 IRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKE 164 (347)
T ss_dssp EEEETTSEEEEEEEEEEEEECCCCCTTGGGCEEEEEEEEEESSCCTTTEEEEECS
T ss_pred EEEeCCCCEEEecceEEEEEeeeeeccCCCcceeEEEEeccCcCChhhEEEEecC
Confidence 99999999999999999999973 4566666542 23344445543
No 4
>3igq_A GLR4197 protein; plgic Cys-loop, membrane protein, transport protein; 2.30A {Gloeobacter violaceus}
Probab=99.87 E-value=8e-23 Score=154.75 Aligned_cols=101 Identities=22% Similarity=0.376 Sum_probs=85.0
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC---ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT---KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~---~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
+.+.+.+|.+|+|++|+|++++|++|+|.|+||+|++.+ ..+.+ +.++||+||++|+|++++.. ..+..
T Consensus 20 ~~l~l~~i~~vdE~~~~~t~~~~l~~~W~D~rL~w~~~~~~i~~~~~----~~~~IW~PDi~l~N~~~~~~----~~~~~ 91 (201)
T 3igq_A 20 TGIYLIECYSLDDKAETFKVNAFLSLSWKDRRLAFDPVRSGVRVKTY----EPEAIWIPEIRFVNVENARD----ADVVD 91 (201)
T ss_dssp EEEEEEEEECCCTTSSEEEEEEEEEEEEECGGGCCCHHHHTCSCEEC----CGGGSCCCCEEESSBSSSCE----EEEEE
T ss_pred EEEEeeecccCcccCCEEEEEEEEeeEEECCccCCCCcCCCEeEecc----cccCcCccCEEEEccccccc----ccceE
Confidence 455669999999999999999999999999999999864 33444 48999999999999987653 35788
Q ss_pred EEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
++|+++|+|.|..|+.++++|.+ +.+.|.+.+
T Consensus 92 v~v~~~G~V~~~~~~~~~s~C~mdl~~FPfD~Q~C~l~f 130 (201)
T 3igq_A 92 ISVSPDGTVQYLERFSARVLSPLDGRRTESDSQTLHIYL 130 (201)
T ss_dssp EEECTTCEEEEEEEEEEEEECCCC------CEEEEEEEE
T ss_pred EEEeCCCcEEEecceeEEEecCcccccCCCCccEeeEEE
Confidence 99999999999999999999973 455566654
No 5
>4afh_A ACHBP; acetylcholine-binding protein, nicotinic receptor, ION chann; HET: NAG BMA MAN L0B; 1.88A {Capitella teleta} PDB: 4afg_A* 4b5d_A*
Probab=99.87 E-value=1.9e-22 Score=155.57 Aligned_cols=114 Identities=10% Similarity=0.154 Sum_probs=92.5
Q ss_pred eeEEeccCCCCcc----cceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeee
Q psy10725 7 QKELVGRSLCTPA----IEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTV 78 (160)
Q Consensus 7 ~~~~~~i~~i~E~----~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~ 78 (160)
.+.+.+|.+|+|+ +|+|++++|++|+|.|+||+|++.+ ..+.+ + .++||+||++|+|++++.++...
T Consensus 39 ~l~l~~i~~v~E~~~~~~~~~t~~~~l~~~W~D~rL~wnp~~~~~i~~i~l-~---~~~IW~PDi~l~N~~~~~~~~~~- 113 (230)
T 4afh_A 39 GLSLQLLKSIEQRGMGFNSIGTFKAIVKLSWVDTILRWDPEPPFDFQKIEI-S---PDEIWTPDIKLFNSVDLDMTLDR- 113 (230)
T ss_dssp EEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECGGGCCCCCTTSCCSEEEE-C---GGGSCCCCEEETTCSSSSCEECT-
T ss_pred EEEHhHhhhhhhcccccCcEEEEEEEEeeEEECccccCCcccCCCeeEEEe-c---cCCEECCcEEEEecccccccccc-
Confidence 4456899999999 9999999999999999999999874 56777 3 79999999999999999987543
Q ss_pred ccEEEEEeeCCceeEEEeEEEeeccc--cccccceeeCC----Chhhhcccccc
Q psy10725 79 PNVLVRINPDGEILYMLSIIENNTNK--RKQKRKALDLN----DPNLVKAIWKP 126 (160)
Q Consensus 79 ~n~~~~i~~dG~v~ys~rl~l~~tc~--~~~~~~~l~l~----~~~~~~~iW~P 126 (160)
+..++|+++|+|.|..++.++++|. ++.+.|.+.++ +.+-+...|..
T Consensus 114 -~~~v~v~~~G~V~~~~~~~~~s~C~mPfD~Q~C~l~f~S~~y~~~~v~l~~~~ 166 (230)
T 4afh_A 114 -TTQAIVFSNGTVLWIPPAVLKVLCVSQDDVDSCHFQFGSWVYSVDEVDIHFMD 166 (230)
T ss_dssp -TSCEEEETTSEEEECCEEEEEEEEEEETTEEEEEEEEEESSCCTTTEEEEEGG
T ss_pred -cceEEEEcCCEEEEecCEEEEEECCCCCCcccCCEeeccccccCceEEEEECC
Confidence 3457899999999999999999995 56666666542 24444555654
No 6
>2bj0_A Acetylcholine-binding protein; 3D-structure, glycoprotein, glycprotein, IGG fold, immunoglobulin domain, pentamer, signal; HET: CXS; 2.0A {Bulinus truncatus}
Probab=99.87 E-value=2.4e-22 Score=152.15 Aligned_cols=114 Identities=20% Similarity=0.261 Sum_probs=93.2
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEeccc-ccCCCC--ceEEcCCCcccCCCcccCcccccC-cccccceeeeccE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRL-KHHSIT--KTLDLNDPNLVKAIWKPEVYFPNA-KHAEFQYVTVPNV 81 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL-~~~~~~--~~i~l~~~~~~~~iW~PDi~~~N~-~~~~~~~~~~~n~ 81 (160)
..+.+.+|.+|+|++|+|++++|++|+|.|+|| +|++.+ ..+.+ + .++||+||++|+|+ +++.+|.. .
T Consensus 29 ~~~~l~~i~~v~e~~~~~~~~~~~~~~W~D~rL~~w~~~~~i~~~~~-~---~~~iW~PDi~~~N~~~~~~~~~~----~ 100 (203)
T 2bj0_A 29 LNFKLMNIVEADTEKDQVEVVLWTQASWKVPYYSSLLSSSSLDQVSL-P---VSKMWTPDLSFYNAIAAPELLSA----D 100 (203)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGGGGTTTSSCSEEEE-E---GGGSCCCCEEETTCSSCCEECSC----C
T ss_pred EEEEEEeEeeecCCCCEEEEEEEEEeEEECcchhccCccCCceEEEE-c---hhhccCCCccccccccccccccc----e
Confidence 345669999999999999999999999999999 999875 45666 3 78999999999999 99998865 5
Q ss_pred EEEEeeCCceeEEEeEEEeecccc-c-----cccceeeCC----Chhhhccccccc
Q psy10725 82 LVRINPDGEILYMLSIIENNTNKR-K-----QKRKALDLN----DPNLVKAIWKPE 127 (160)
Q Consensus 82 ~~~i~~dG~v~ys~rl~l~~tc~~-~-----~~~~~l~l~----~~~~~~~iW~Pd 127 (160)
.++|+++|+|.|+.|+.++++|.+ + .+.|.+.++ +.+-+...|..+
T Consensus 101 ~v~i~~~G~V~~~~~~~~~~~C~m~dl~~fD~Q~C~l~f~S~~y~~~~v~l~~~~~ 156 (203)
T 2bj0_A 101 RVVVSKDGSVIYVPSQRVRFTCDLINVDTEPGATCRIKVGSWTHDNKQFALITGEE 156 (203)
T ss_dssp EEEEETTSEEEECCEEEEEEECCCTTTTSSSCEEEEEEEEESSCCTTTEEEEECTT
T ss_pred EEEEeCCcEEEEecceEEEEEccccccCccccceeeEEEEcccccCcEEEEEecCC
Confidence 788999999999999999999997 3 345555442 244455566544
No 7
>1uw6_A Acetylcholine-binding protein; pentamer, IGG fold, nicotine, glycoprotein; HET: NCT; 2.2A {Lymnaea stagnalis} SCOP: b.96.1.1 PDB: 1i9b_A* 1ux2_A* 3u8l_A* 1yi5_A 1uv6_A* 3u8k_A* 3u8j_B* 3u8m_A* 3u8n_A* 2zju_A* 2zjv_A*
Probab=99.87 E-value=3.3e-22 Score=152.28 Aligned_cols=114 Identities=19% Similarity=0.324 Sum_probs=91.4
Q ss_pred eeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC--ceEEcCCCcccCCCcccCcccccCcccccceeeeccEEEE
Q psy10725 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT--KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVR 84 (160)
Q Consensus 7 ~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~--~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~~~ 84 (160)
.+.+.+|.+|+|++|+|++++|++|+|.|+||+|++.+ ..+.+ + .++||+||++|+|++++. ..+.+ ..++
T Consensus 33 ~~~l~~i~~v~e~~~~~~~~~~~~~~W~D~rL~w~~~~~~~~l~~-~---~~~iW~PDi~~~N~~~~~--~~~~~-~~~~ 105 (211)
T 1uw6_A 33 SLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSV-P---ISSLWVPDLAAYNAISKP--EVLTP-QLAR 105 (211)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEEECGGGCCCCTTSCSEEEE-E---GGGSCCCCEEETTBCSCC--EECSC-CEEE
T ss_pred EEEHHHhhchhhhCcEEEEEEEEEeEeECcccccChhhcCCeEEc-c---HHHccCCCEeeecccccc--cccee-eEEE
Confidence 45568999999999999999999999999999999873 46777 3 789999999999999988 34444 7899
Q ss_pred EeeCCceeEEEeEEEeeccc---cc---cccceeeCC----Chhhhccccccc
Q psy10725 85 INPDGEILYMLSIIENNTNK---RK---QKRKALDLN----DPNLVKAIWKPE 127 (160)
Q Consensus 85 i~~dG~v~ys~rl~l~~tc~---~~---~~~~~l~l~----~~~~~~~iW~Pd 127 (160)
|+++|+|.|..|+.++++|. ++ .+.|.+.++ +.+-+...|..+
T Consensus 106 i~~~G~V~~~~~~~~~~~C~~~~mdl~D~Q~C~l~f~S~~y~~~~i~l~~~~~ 158 (211)
T 1uw6_A 106 VVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTE 158 (211)
T ss_dssp EETTSEEEECCEEEEEEECCCTTTTSSSCEEEEEEEEESSCCTTTEEEEECCC
T ss_pred EeCCceEEEeCCEEEEEECCCCCCCCCcceEeEEEEEcccccCceEEEEeccc
Confidence 99999999999999999999 52 344444432 244455566543
No 8
>4aoe_A Acetylcholine-binding protein type 2; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholin receptor; 5.80A {Biomphalaria glabrata}
Probab=99.87 E-value=3e-22 Score=151.99 Aligned_cols=102 Identities=20% Similarity=0.259 Sum_probs=85.8
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC---ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT---KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~---~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
..+.|.+|.+|+|++|++++++|++|+|.|+||+|++.- ..+.+ + .++||+||++|+|+++...+ ..+..
T Consensus 33 ~~l~l~~i~~vde~~q~~~~~~wl~~~W~D~rL~W~~~~~~i~~i~v-~---~~~IW~PDi~l~N~~~~~~~---~~~~~ 105 (205)
T 4aoe_A 33 FKYSLQDIYTADVGTDQVELGLWLVISWKDRSLSWSNECTTFNELTL-P---SKYIWLPHIEVYNSIGKPGI---HSDQL 105 (205)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECCCCCCSCCCSCCCEEEE-E---GGGSCCCCCEETTBSSCCEE---CSCCE
T ss_pred EEEEEEEeeeEcccCCEEEEEEEEEEEEECCccccCCcCCCccEEEe-C---HHHhccccEEEecccccccc---ccceE
Confidence 345569999999999999999999999999999999752 46677 3 78999999999999876532 35678
Q ss_pred EEEeeCCceeEEEeEEEeecccc------ccccceeeC
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR------KQKRKALDL 114 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~------~~~~~~l~l 114 (160)
++|+++|+|.|..++.++++|.. +.+.|.+.+
T Consensus 106 v~v~~~G~V~~~~~~~~~s~C~~d~~fPfD~Q~C~l~f 143 (205)
T 4aoe_A 106 VRVYKDGTVTFVPQYTIRFSCALENVTTEQGAACTLKF 143 (205)
T ss_dssp EEEETTSEEEECCEEEEEEECCCTTSSSSSCEEEEEEE
T ss_pred EEEeCCcEEEEeCcEEEEEecccCcCCCccCCeEEEEE
Confidence 99999999999999999999974 456677765
No 9
>4aod_A Acetylcholine-binding protein type 1; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholine receptor; 6.00A {Biomphalaria glabrata}
Probab=99.86 E-value=4.2e-22 Score=151.24 Aligned_cols=101 Identities=17% Similarity=0.291 Sum_probs=84.1
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC---ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT---KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~---~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
..+.|.+|.+|+|++|++++++|++|+|+|+||+|++.- ..+.+ + .++||+||++|+|++++.. ...+..
T Consensus 33 ~~l~l~~i~~vde~~q~~t~~~wl~~~W~D~rL~W~~~~~~i~~i~v-~---~~~IW~PDi~l~N~~~~~~---~~~~~~ 105 (205)
T 4aod_A 33 FEYSLQKIFRADVENDEVDIGLWTTLVWKDRCLNWFNEFTSFKELTV-P---IAEIWTPDIFIFDSVGAPE---IFSDKL 105 (205)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECCCCCCSCCCSCCCEEEE-E---GGGSCCCCEEETTBSSCCE---ECSCCE
T ss_pred EEEEeeeeeeecccCCEEEEEEEEEEEEECCceeeCCcCCCccEeec-c---HHhcCcCCEEEEcccccce---eecceE
Confidence 345569999999999999999999999999999998752 45666 3 7899999999999987653 345678
Q ss_pred EEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
++|+++|+|.|..++.++++|.+ + +.|.+.+
T Consensus 106 ~~v~~~G~V~~~~~~~~~s~C~~d~~~fPfD-Q~C~l~f 143 (205)
T 4aod_A 106 ARVSQDGTVTYVPQLKVRLSCPLADLKLETG-VTCSLKS 143 (205)
T ss_dssp EEEETTSEEEECCEEEEEEECCCTTSSSSSC-EEEEEEE
T ss_pred EEEecCCEEEEeccEEEEEEecCccccCCCC-cEEEEEE
Confidence 89999999999999999999973 3 5566654
No 10
>3sq6_A ACHBP, neuronal acetylcholine receptor subunit alpha-7, acetylcholine-binding protein; nicotinic receptor; HET: EPJ NAG; 2.80A {Homo sapiens} SCOP: b.96.1.1 PDB: 3sq9_A*
Probab=99.86 E-value=5.8e-22 Score=150.27 Aligned_cols=100 Identities=18% Similarity=0.273 Sum_probs=84.8
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcc--cccceeeec
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKH--AEFQYVTVP 79 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~--~~~~~~~~~ 79 (160)
..+.+.+|.+|+|++|+|++++|++|+|.|+||+|++.+ ..+.+ + .++||+||++|+|+++ +.++..
T Consensus 31 ~~~~l~~i~~v~e~~~~~t~~~~~~~~W~D~rL~w~~~~~~~i~~i~~-~---~~~iW~PDi~~~N~~~~~~~~~~~--- 103 (204)
T 3sq6_A 31 FSLSLLQIMDVDEKNQVVDVVFWLQMSWTDHYLQWNVSEYPGVKQVSV-P---ISSLWVPDLAAYNAISKPEVLTPQ--- 103 (204)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGCCCTTTSSSCCEEEE-E---GGGSCCCCEEETTBSSCCEECSCC---
T ss_pred EEEEhhheeehhccccEEEEEEeeeeEEECCCcccChHHcCCccEEEc-C---HHHCcCCCEEeEcccccCCccccc---
Confidence 345568999999999999999999999999999999874 45677 3 7999999999999999 777642
Q ss_pred cEEEEEeeCCceeEEEeEEEeecccc------ccccceeeC
Q psy10725 80 NVLVRINPDGEILYMLSIIENNTNKR------KQKRKALDL 114 (160)
Q Consensus 80 n~~~~i~~dG~v~ys~rl~l~~tc~~------~~~~~~l~l 114 (160)
.++|+++|+|.|..++.++++|.+ +.+.|.+.+
T Consensus 104 --~v~v~~~G~V~~~~~~~~~~~C~mdl~fPfD~Q~C~l~f 142 (204)
T 3sq6_A 104 --LALVNSSGHVQYLPSIRQRFSCDVSGVDTESGATCKLKF 142 (204)
T ss_dssp --EEEEETTSEEEECCEEEEEEECCCGGGSSSSCEEEEEEE
T ss_pred --EEEEEeCCEEEEecCeeEEEeccccccCCCCCcEEEEEE
Confidence 788999999999999999999963 445566654
No 11
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=99.85 E-value=1e-21 Score=157.83 Aligned_cols=104 Identities=21% Similarity=0.392 Sum_probs=87.4
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCCceEEcCCCcccCCCcccCcccccCcccccceeeeccEEEEE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRI 85 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~~~i 85 (160)
+.+.+.+|.++||++|+|++++|++|+|+|+||+|++.+..+.. ...+.++||+||++|+|++++. +.++..++|
T Consensus 24 ~~~~l~~i~~vde~~~~~t~~~~l~~~W~D~rL~w~~~~~~i~~-~~~~~~~IW~PDi~l~N~~~~~----~~~~~~~~v 98 (321)
T 3tlw_A 24 TGIYLIESYSLDDCAETFKVNAFLSLSWKDRRLAFDPVRSGVRV-KTYEPEAIWIPEIRFVNVENAR----DADVVDISV 98 (321)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGCCCSTTTCCSS-EECCGGGSCCCCEEESSBSSCC----EEEEEEEEE
T ss_pred EEEEEEeecceeccCcEEEEEEEEeeEEECcccCCCCccCCeee-ecccccCeEcCcEEeecccccc----cccceeEEE
Confidence 34556999999999999999999999999999999998633433 2345899999999999999987 356788999
Q ss_pred eeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 86 NPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 86 ~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
++||+|.|..|+.++.+|.+ |.+.|.+.+
T Consensus 99 ~~~G~V~~~~~~~~~~~C~~dl~~FPfD~Q~C~l~f 134 (321)
T 3tlw_A 99 SPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYL 134 (321)
T ss_dssp CTTCEEEEEEEEEEEEECCCCCTTTTSCEEEEEEEE
T ss_pred eCCccEEEecceEEEEEEEeecccCCCCceeEeEEE
Confidence 99999999999999999974 456666654
No 12
>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=99.84 E-value=2.6e-21 Score=158.34 Aligned_cols=103 Identities=17% Similarity=0.336 Sum_probs=88.4
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~ 81 (160)
..+.+.+|.+++|++|+|++++|++|+|+|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|....+|
T Consensus 35 ~~i~l~~i~~vde~~~~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v-~---~~~IW~PDi~~~N~~~~~~~~~~~~~- 109 (369)
T 2bg9_C 35 LSLTLSNLISLKETDETLTTNVWMDHAWYDHRLTWNASEYSDISILRL-R---PELIWIPDIVLQNNNDGQYNVAYFCN- 109 (369)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECTTTCCCCCCCCTCSCEEE-C---GGGSCCCCEEETTTCSSCCBSSSSCC-
T ss_pred EEEEehhhccccccccceEEEEEEeeeeECCCcccCccccCCeeEEEe-c---HHhccCCcEecccccccccccccccc-
Confidence 345568999999999999999999999999999999873 46777 4 68999999999999999998776666
Q ss_pred EEEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 82 LVRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 82 ~~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
+.|++||+|.|..|+.++.+|.+ |.+.|.+.+
T Consensus 110 -~~i~~~G~V~~~~~~~~~~~C~mdl~~FPfD~Q~C~l~f 148 (369)
T 2bg9_C 110 -VLVRPNGYVTWLPPAIFRSSCPINVLYFPFDWQNCSLKF 148 (369)
T ss_dssp -EEECSSSEEEECCEEEEEECCSCGGGSSSTTCCEEEEEE
T ss_pred -EEEECCccEEEecCEEEEEECcCcccCCCCCceEeeEEE
Confidence 46899999999999999999974 456666654
No 13
>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=99.84 E-value=2.4e-21 Score=158.59 Aligned_cols=102 Identities=21% Similarity=0.347 Sum_probs=88.0
Q ss_pred eeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 7 ~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
.+.+.+|.+++|++|+|++++|++|+|+|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|... +..
T Consensus 34 ~i~l~~i~~vde~~~~~~~~~~l~~~W~D~rL~w~p~~~~~i~~l~v-~---~~~IW~PDi~~~N~~~~~~~~~~--~~~ 107 (370)
T 2bg9_A 34 GLQLIQLINVDEVNQIVETNVRLRQQWIDVRLRWNPADYGGIKKIRL-P---SDDVWLPDLVLYNNADGDFAIVH--MTK 107 (370)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEECCTTSCCCTTTHHHHSSEEE-E---GGGSCCCCEEETTCCCSCEESCS--SCE
T ss_pred EEEehHhhcchhhccceEEEEEEeeeeECCCccCChhhcCCccEEEe-c---hhhccCCcEeccccccccccccc--cce
Confidence 45568999999999999999999999999999999874 56777 3 79999999999999999987653 457
Q ss_pred EEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
++|++||+|.|..|+.++.+|.+ |.+.|.+.+
T Consensus 108 ~~i~~~G~V~~~~~~~~~~~C~mdl~~FPfD~Q~C~l~f 146 (370)
T 2bg9_A 108 LLLDYTGKIMWTPPAIFKSYCEIIVTHFPFDQQNCTMKL 146 (370)
T ss_dssp EEECSSCCEEECCEEEEEEECCCCTTSSSSSCEEEEEEE
T ss_pred EEEECCeeEEEecceEEEEECCCCcCCCCCCcceeeEEE
Confidence 88999999999999999999984 456666654
No 14
>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=99.84 E-value=2.7e-21 Score=158.28 Aligned_cols=102 Identities=18% Similarity=0.336 Sum_probs=87.5
Q ss_pred eeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 7 ~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
.+.+.+|.+++|++|+|++++|++|+|+|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|....++
T Consensus 34 ~i~l~~i~~vde~~~~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v-~---~~~IW~PDi~~~N~~~~~~~~~~~~~-- 107 (370)
T 2bg9_B 34 GLTLTSLLILNEKNEEMTTSVFLNLAWTDYRLQWDPAAYEGIKDLSI-P---SDDVWQPDIVLMNNNDGSFEITLHVN-- 107 (370)
T ss_dssp ECCEEEEEEEETTTTEEEEEEECEEEEECTTSCCCTTTTSSCSEEEE-E---SSSSCCCCEEESSCCCSCEESSSSCE--
T ss_pred EEEehhhhhhhccccceEEEEEEeeeeECcccCcCccccCCeeEEEe-c---hhhccCCCccccccccccccccccce--
Confidence 44558999999999999999999999999999999873 46777 3 68999999999999999988765555
Q ss_pred EEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
+.|++||+|.|..|+.++.+|.+ |.+.|.+.+
T Consensus 108 ~~v~~~G~V~~~~~~~~~~~C~mdl~~FPfD~Q~C~l~f 146 (370)
T 2bg9_B 108 VLVQHTGAVSWHPSAIYRSSCTIKVMYFPFDWQNCTMVF 146 (370)
T ss_dssp EEEETTSEEEECCEEEEEECCCCTTCSSSTTCCCCEEEE
T ss_pred EEEeCCceEEEEecceEEEEccCcccCCCCCceeeeEEE
Confidence 56899999999999999999974 456666654
No 15
>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=99.84 E-value=3.1e-21 Score=157.93 Aligned_cols=116 Identities=17% Similarity=0.299 Sum_probs=92.8
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~ 81 (160)
..+.+.+|.+++|++|+|++++|++|+|+|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|....+|.
T Consensus 32 ~~i~l~~i~~vde~~~~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v-~---~~~IW~PDi~~~N~~~~~~~~~~~~~~ 107 (370)
T 2bg9_E 32 LKLTLTNLISLNEKEEALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRI-P---SELLWLPDVVLENNVDGQFEVAYYANV 107 (370)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECGGGCCCTTTTTTCSCBCC-C---GGGSCCCCEEESSSCCSCCBSSSSCCC
T ss_pred EEEEehhhhchhhcccceeEeEEEeeEEECCCcCCChhhcCCeeEEee-c---hhccCCCCEeeccccCCcccccccccE
Confidence 345568999999999999999999999999999999874 34566 3 689999999999999999987666664
Q ss_pred EEEEeeCCceeEEEeEEEeecccc-------ccccceeeCC----Chhhhccccccc
Q psy10725 82 LVRINPDGEILYMLSIIENNTNKR-------KQKRKALDLN----DPNLVKAIWKPE 127 (160)
Q Consensus 82 ~~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l~----~~~~~~~iW~Pd 127 (160)
.|++||+|.|+.|+.++.+|.+ |.+.|.+.++ +.+-+.-.|..+
T Consensus 108 --~v~~~G~V~~~~~~~~~~~C~mdl~~FPfD~Q~C~l~f~S~~y~~~~i~l~~~~~ 162 (370)
T 2bg9_E 108 --LVYNDGSMYWLPPAIYRSTCPIAVTYFPFDWQNCSLVFRSQTYNAHEVNLQLSAE 162 (370)
T ss_dssp --EECSSSEEEECCEEEEEECCCCSSCSSSSSCCBCCEEEEESSSCTTSCCEECCCS
T ss_pred --EEECCccEEEecCEEEEEECcccccCCCCCeEEEEEEEEeeccccceeEEEecCC
Confidence 4899999999999999999974 4566666542 233344455443
No 16
>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A
Probab=99.83 E-value=5.5e-21 Score=160.49 Aligned_cols=102 Identities=21% Similarity=0.360 Sum_probs=87.5
Q ss_pred eeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 7 ~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
.+.+.+|.++||++|+|++++|++|+|+|+||+|++.+ +.+.+ + .++||+||++|+|++++.+|..... .
T Consensus 58 ~l~l~~i~~vdE~~q~~t~~~~l~~~W~D~rL~Wnp~~y~gi~~l~v-p---~~~IW~PDi~l~N~~d~~~~~~~~~--~ 131 (461)
T 4aq5_A 58 GLQLIQLINVDEVNQIVETNVRLRQQWIDVRLRWNPADYGGIKKIRL-P---SDDVWLPDLVLYNNADGDFAIVHMT--K 131 (461)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEECCTTCBCCTTTHHHHSSEEE-E---GGGSCCCCEEESSCCCSCCTTCSSC--E
T ss_pred EEEEeeehhhhccceEEEEEEEEeeeeECcccCCChhhcCCccEEEe-c---CCCEECCceeeeccccccccccccc--c
Confidence 45558999999999999999999999999999999874 56777 3 7899999999999999998865433 4
Q ss_pred EEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
++|++||+|.|..|+.++++|.. |.+.|.+.+
T Consensus 132 v~v~~dG~V~~~~~~~~~s~C~mdl~~FPfD~Q~C~l~f 170 (461)
T 4aq5_A 132 LLLDYTGKIMWTPPAIFKSYCEIIVTHFPFDQQNCTMKL 170 (461)
T ss_dssp EEECSBCCEEECCEEEEEEECCCCGGGSSSSCEEEEEEE
T ss_pred eEEcCCccEEEeccccccccccccccCCCCccCccCeEE
Confidence 78999999999999999999973 456666654
No 17
>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C
Probab=99.82 E-value=1.2e-20 Score=160.61 Aligned_cols=103 Identities=17% Similarity=0.336 Sum_probs=89.0
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~ 81 (160)
+.+.+.+|.+|+|++|+|++++|++|+|+|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|....+|+
T Consensus 56 v~l~l~~I~~VdE~~q~~t~~vwl~q~W~D~RL~Wnp~~y~gi~~l~v-p---~~~IW~PDi~l~N~~d~~~~~~~~~nv 131 (522)
T 4aq5_C 56 LSLTLSNLISLKETDETLTTNVWMDHAWYDHRLTWNASEYSDISILRL-R---PELIWIPDIVLQNNNDGQYNVAYFCNV 131 (522)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECTTCCCCCCCCCTCSCEEE-C---GGGSCCCCEEETTTCSSCCBSCSSCCE
T ss_pred EEEEeeecccccccccEEEEEEEEeeeEeCcccCCCchhcCCceEEee-c---cCCEECCcEeccccccCCccccccceE
Confidence 345668999999999999999999999999999999874 56777 3 789999999999999999987766664
Q ss_pred EEEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 82 LVRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 82 ~~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
.|++||+|.|..|+.++++|.+ |.+.|.+.+
T Consensus 132 --~V~~dG~V~~~~~~~~~ssC~mdl~~FPfD~Q~C~L~f 169 (522)
T 4aq5_C 132 --LVRPNGYVTWLPPAIFRSSCPINVLYFPFDWQNCSLKF 169 (522)
T ss_dssp --EECSSSEEEECCEEEEEECCCCTTTSCSTTCCEEEEEE
T ss_pred --EEeCCccEEEEcccccccccccccCcCCCcCceEeEEE
Confidence 4899999999999999999974 556666654
No 18
>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E
Probab=99.82 E-value=8.4e-21 Score=160.37 Aligned_cols=103 Identities=17% Similarity=0.319 Sum_probs=88.1
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccE
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNV 81 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~ 81 (160)
+.+.+.+|.+|+|++|+|++++|++|+|+|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|....+|+
T Consensus 32 v~l~l~~I~~VdE~~q~~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v-~---~~~IW~PDi~l~N~~d~~~~~~~~~nv 107 (488)
T 4aq5_E 32 LKLTLTNLISLNEKEEALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRI-P---SELLWLPDVVLENNVDGQFEVAYYANV 107 (488)
T ss_dssp EEEEEEEECCCBTTTTBEEEEEEEEEEEECCTTCCCTTTTTTCSCCCC-C---TTSSCCCCEECSSSCCSCCBSCSSSCC
T ss_pred EEEEEeeeeccccccceeeeeeeeeeEEECcccCcCchhcCCceEEec-C---ccCEECCceehhccccccccccccccE
Confidence 345668999999999999999999999999999999874 44566 3 799999999999999999987766664
Q ss_pred EEEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 82 LVRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 82 ~~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
.|+++|+|.|..|+.++++|.+ |.+.|.+.+
T Consensus 108 --~v~~~G~V~~~~~~~~~s~C~mdl~~FPfD~Q~C~l~f 145 (488)
T 4aq5_E 108 --LVYNDGSMYWLPPAIYRSTCPIAVTYFPFDWQNCSLVF 145 (488)
T ss_dssp --CBCTTSEEEECCEEBCEECCCCSSSSSSSSCCCCCEEE
T ss_pred --EEeCCceEEEecceeEEeecccccccCCCcCceeeEEe
Confidence 4899999999999999999973 456666654
No 19
>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 2yn6_A* 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A 4a97_A* 4a96_A* 2yoe_A* 4a98_A*
Probab=99.82 E-value=2.3e-20 Score=150.02 Aligned_cols=103 Identities=19% Similarity=0.294 Sum_probs=86.9
Q ss_pred eeeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCCceEEcCCCcc-----cCCCcccCcccccCcccccceeeecc
Q psy10725 6 AQKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSITKTLDLNDPNL-----VKAIWKPEVYFPNAKHAEFQYVTVPN 80 (160)
Q Consensus 6 ~~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~~~i~l~~~~~-----~~~iW~PDi~~~N~~~~~~~~~~~~n 80 (160)
+.+.+.+|.++||++|+|++++|++|+|+|+||+|+.. +.+.+ ++.. .++||+||++|+|++++.+ .++
T Consensus 16 ~~~~l~~i~~vde~~~~~t~~~~l~~~W~D~rL~~~~~-~~l~l-~~~~~~~ip~~~IW~Pdi~l~N~~~~~~----~~~ 89 (322)
T 3rqw_A 16 VSIFINKIYGVNTLEQTYKVDGYIVAQWTGKPRKTPGD-KPLIV-ENTQIERWINNGLWVPALEFINVVGSPD----TGN 89 (322)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEECSCCCCSTT-SCEEE-ETHHHHHHHHTTCCCCCEEETTBSSCCE----EEE
T ss_pred EEEEEEeeccccccCcEEEEEEEEeeEEechhhCCCCC-Cceee-cchhhcccccccccCCcEEEEcccCccc----ccc
Confidence 34566999999999999999999999999999999543 45655 3333 8999999999999999987 467
Q ss_pred EEEEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 81 VLVRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 81 ~~~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
..++|++||+|.|..|+.++.+|.+ |.+.|.+.+
T Consensus 90 ~~~~i~~~G~V~~~~~~~~~~~C~~dl~~FPfD~Q~C~l~f 130 (322)
T 3rqw_A 90 KRLMLFPDGRVIYNARFLGSFSNDMDFRLFPFDRQQFVLEL 130 (322)
T ss_dssp EEEEECTTSEEEEEEEEEEEEECCCCCTTTTSCEEEEEEEE
T ss_pred eeEEEeCCcCEEEeeceeEEEeccccccCCCCCCcEEEEEE
Confidence 8899999999999999999999974 456666654
No 20
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=99.81 E-value=1.2e-20 Score=159.66 Aligned_cols=102 Identities=18% Similarity=0.336 Sum_probs=87.7
Q ss_pred eeEEeccCCCCcccceEEEeEEEEeEEEecccccCCCC----ceEEcCCCcccCCCcccCcccccCcccccceeeeccEE
Q psy10725 7 QKELVGRSLCTPAIEDYEVDLYLRQKWQDQRLKHHSIT----KTLDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVL 82 (160)
Q Consensus 7 ~~~~~~i~~i~E~~~~~~~~~~l~q~W~D~RL~~~~~~----~~i~l~~~~~~~~iW~PDi~~~N~~~~~~~~~~~~n~~ 82 (160)
.+.+.+|.+|||++|+|++++|++|+|+|+||+|++.+ ..+.+ + .++||+||++|+|++++.+|....+|
T Consensus 58 ~l~l~~i~~vdE~~q~~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v-~---~~~IW~PDi~l~N~~d~~~~~~~~~n-- 131 (493)
T 4aq5_B 58 GLTLTSLLILNEKNEEMTTSVFLNLAWTDYRLQWDPAAYEGIKDLSI-P---SDDVWQPDIVLMNNNDGSFEITLHVN-- 131 (493)
T ss_dssp ECCEEEEEEEETTTTEEEEEEECEEEEECTTCCCCHHHHSSCSCEEE-C---SCSSCCCCCEESSCCCSCEESSSSSC--
T ss_pred EEEEeeeeeccccceEEEEEEEeecceECcccCCChhhcCCeeEEec-c---cccCccCcEEEecccccccccccccc--
Confidence 34558999999999999999999999999999999862 56777 3 78999999999999999988766666
Q ss_pred EEEeeCCceeEEEeEEEeecccc-------ccccceeeC
Q psy10725 83 VRINPDGEILYMLSIIENNTNKR-------KQKRKALDL 114 (160)
Q Consensus 83 ~~i~~dG~v~ys~rl~l~~tc~~-------~~~~~~l~l 114 (160)
+.|++||+|.|..|+.++++|.+ |.+.|.+.+
T Consensus 132 v~v~~~G~V~~~~~~~~~s~C~mdl~~FPfD~Q~C~l~f 170 (493)
T 4aq5_B 132 VLVQHTGAVSWHPSAIYRSSCTIKVMYFPFDWQNCTMVF 170 (493)
T ss_dssp EEECTTSEEEECCEEEEEECCSCTTCSSSTTCCCCEEEE
T ss_pred eEEecCCCEEEeeeeeeeecccccccCCCccceeEEEEE
Confidence 45899999999999999999973 556676654
No 21
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=98.79 E-value=1e-08 Score=82.82 Aligned_cols=69 Identities=30% Similarity=0.525 Sum_probs=57.3
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
.-+..++..+.+++.|.|.. ..+.+.+. +. ++||+||++|.|++++.+|..+.+|.+++|++||+|.|
T Consensus 44 e~~~~~t~~~~l~~~W~D~rL~w~p~~~~~~~~l~~~-~~--~~IW~PDi~l~N~~~~~~~~~~~~n~~v~i~~~G~V~~ 120 (347)
T 3rhw_A 44 VVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILT-VG--HQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLY 120 (347)
T ss_dssp TTTTEEEEEEEEEEEEECGGGCSSTTCSSSCSEEECC-TT--CCCCCCCEECTTEEEEEECCSSSCSEEEEEETTSEEEE
T ss_pred ccceeEEEEEEEeeEEECcccCCCCccCCCceEEEec-ch--hceecCCEeeeccccccccccccccEEEEEeCCCCEEE
Confidence 35568899999999998732 23445552 32 89999999999999999999999999999999999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 121 ~ 121 (347)
T 3rhw_A 121 S 121 (347)
T ss_dssp E
T ss_pred e
Confidence 6
No 22
>2wn9_A Soluble acetylcholine receptor; 4-0H-DMXBA, acetylcholine binding protein; HET: ZY5 NAG BMA MAN; 1.75A {Aplysia californica} PDB: 2wnj_A* 2wzy_A* 2x00_A* 3peo_A* 2pgz_A* 2ph9_A* 4dbm_A* 3c84_A* 2byq_A* 2byr_A* 2bys_A* 2wnc_A* 2wnl_A* 3c79_A* 2byn_A* 3pmz_A* 2x00_D* 2xnv_A* 2xnt_A* 2xnu_A* ...
Probab=98.66 E-value=2.3e-08 Score=76.49 Aligned_cols=65 Identities=12% Similarity=0.213 Sum_probs=53.1
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
..+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|.. |..++|++||+|.|
T Consensus 54 e~~~~~~~~~~l~~~W~D~rL~w~~~~y~~i~~l~~~----~~~IW~PDi~l~N~~~~~~~~~---~~~v~i~~~G~V~~ 126 (228)
T 2wn9_A 54 SSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTS----AADIWTPDITAYSSTRPVQVLS---PQIAVVTHDGSVMF 126 (228)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECCGGGGTTCCEEEEE----GGGSCCCCEEESSBSSCCEECS---CCEEEEETEEEEEE
T ss_pred ccccEEEEEEEEEEEEECCCccCCchhcCCeeEEEec----HHHccCCceecccccccccccc---cceEEEeCCeEEEE
Confidence 35678999999999999732 22445552 3799999999999999999874 89999999999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 127 ~ 127 (228)
T 2wn9_A 127 I 127 (228)
T ss_dssp C
T ss_pred e
Confidence 6
No 23
>2qc1_B Acetylcholine receptor subunit alpha; nicotinic acetylcholine receptor, glycosylated protein, beta sandwich, Cys-loop, buried hydrophilic residues; HET: NAG MAN; 1.94A {Mus musculus} PDB: 1l4w_B 1ljz_B
Probab=98.64 E-value=4.9e-08 Score=73.74 Aligned_cols=66 Identities=17% Similarity=0.300 Sum_probs=53.5
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
.-+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|..+. ..++|++||+|.|
T Consensus 46 e~~~~~~~~~~~~~~W~D~rL~w~~~~~~~i~~l~~~----~~~iW~PDi~~~N~~~~~~~~~~~--~~~~v~~~G~V~~ 119 (212)
T 2qc1_B 46 EVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIP----SEKIWRPDVVLYNNADGDFAIVKF--TKVLLDYTGHITW 119 (212)
T ss_dssp TTTTEEEEEEEEEEEEECTTCCCCGGGGTTCCEEEEC----GGGSCCCCEEECCBTTTSSCEECC--CCEEEETTCEEEE
T ss_pred cCCcEEEEEEEEeeEEECCCcccChhhcCCeeEEEcc----hhhccCCceeccccccccccccce--eeEEEECCeeEEE
Confidence 35578999999999999732 23455663 379999999999999999998765 5689999999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 120 ~ 120 (212)
T 2qc1_B 120 T 120 (212)
T ss_dssp C
T ss_pred E
Confidence 6
No 24
>2bj0_A Acetylcholine-binding protein; 3D-structure, glycoprotein, glycprotein, IGG fold, immunoglobulin domain, pentamer, signal; HET: CXS; 2.0A {Bulinus truncatus}
Probab=98.60 E-value=7.6e-08 Score=72.25 Aligned_cols=64 Identities=20% Similarity=0.308 Sum_probs=51.5
Q ss_pred CCceeEEEeEEEeeccccccc--------cceeeCCChhhhcccccccceecCc-ccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQK--------RKALDLNDPNLVKAIWKPEVYFPNA-KHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~~--------~~~l~l~~~~~~~~iW~Pd~~f~n~-k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
.-+..++..+.+++.|.|..- ...+.+ ..++||+||++|.|+ +++.+|.. ..++|++||+|.|
T Consensus 41 e~~~~~~~~~~~~~~W~D~rL~~w~~~~~i~~~~~----~~~~iW~PDi~~~N~~~~~~~~~~----~~v~i~~~G~V~~ 112 (203)
T 2bj0_A 41 TEKDQVEVVLWTQASWKVPYYSSLLSSSSLDQVSL----PVSKMWTPDLSFYNAIAAPELLSA----DRVVVSKDGSVIY 112 (203)
T ss_dssp TTTTEEEEEEEEEEEEECGGGGGGTTTSSCSEEEE----EGGGSCCCCEEETTCSSCCEECSC----CEEEEETTSEEEE
T ss_pred CCCCEEEEEEEEEeEEECcchhccCccCCceEEEE----chhhccCCCccccccccccccccc----eEEEEeCCcEEEE
Confidence 355789999999999988432 123333 147999999999999 99999987 6899999999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 113 ~ 113 (203)
T 2bj0_A 113 V 113 (203)
T ss_dssp C
T ss_pred e
Confidence 6
No 25
>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 2yn6_A* 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A 4a97_A* 4a96_A* 2yoe_A* 4a98_A*
Probab=98.54 E-value=9.1e-08 Score=76.42 Aligned_cols=67 Identities=21% Similarity=0.245 Sum_probs=55.8
Q ss_pred CCceeEEEeEEEeecccccc----ccceeeCCChhh-----hcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ----KRKALDLNDPNL-----VKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~----~~~~l~l~~~~~-----~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
.-+..++..+.+++.|.|.. ..+.+.+ ++++ .++||+||++|.|++++.+ .+|..+++++||+|.|
T Consensus 28 e~~~~~t~~~~l~~~W~D~rL~~~~~~~l~l-~~~~~~~ip~~~IW~Pdi~l~N~~~~~~----~~~~~~~i~~~G~V~~ 102 (322)
T 3rqw_A 28 TLEQTYKVDGYIVAQWTGKPRKTPGDKPLIV-ENTQIERWINNGLWVPALEFINVVGSPD----TGNKRLMLFPDGRVIY 102 (322)
T ss_dssp TTTTEEEEEEEEEEEEECSCCCCSTTSCEEE-ETHHHHHHHHTTCCCCCEEETTBSSCCE----EEEEEEEECTTSEEEE
T ss_pred ccCcEEEEEEEEeeEEechhhCCCCCCceee-cchhhcccccccccCCcEEEEcccCccc----ccceeEEEeCCcCEEE
Confidence 34568999999999999853 4466666 3555 7899999999999999998 6789999999999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 103 ~ 103 (322)
T 3rqw_A 103 N 103 (322)
T ss_dssp E
T ss_pred e
Confidence 6
No 26
>1uw6_A Acetylcholine-binding protein; pentamer, IGG fold, nicotine, glycoprotein; HET: NCT; 2.2A {Lymnaea stagnalis} SCOP: b.96.1.1 PDB: 1i9b_A* 1ux2_A* 3u8l_A* 1yi5_A 1uv6_A* 3u8k_A* 3u8j_B* 3u8m_A* 3u8n_A* 2zju_A* 2zjv_A*
Probab=98.53 E-value=1.5e-07 Score=71.07 Aligned_cols=64 Identities=23% Similarity=0.374 Sum_probs=51.6
Q ss_pred CCceeEEEeEEEeecccccc--------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 88 DGEILYMLSIIENNTNKRKQ--------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~--------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
.-+..++..+.+++.|.|.. .. .+.++ .++||+||++|.|++++. .++.+ ..++|++||+|.|+
T Consensus 44 e~~~~~~~~~~~~~~W~D~rL~w~~~~~~~-~l~~~----~~~iW~PDi~~~N~~~~~--~~~~~-~~~~i~~~G~V~~~ 115 (211)
T 1uw6_A 44 EITNEVDVVFWQQTTWSDRTLAWNSSHSPD-QVSVP----ISSLWVPDLAAYNAISKP--EVLTP-QLARVVSDGEVLYM 115 (211)
T ss_dssp TTTTEEEEEEEEEEEEECGGGCCCCTTSCS-EEEEE----GGGSCCCCEEETTBCSCC--EECSC-CEEEEETTSEEEEC
T ss_pred hhCcEEEEEEEEEeEeECcccccChhhcCC-eEEcc----HHHccCCCEeeecccccc--cccee-eEEEEeCCceEEEe
Confidence 35678999999999999742 12 55552 379999999999999998 56655 89999999999986
No 27
>4afh_A ACHBP; acetylcholine-binding protein, nicotinic receptor, ION chann; HET: NAG BMA MAN L0B; 1.88A {Capitella teleta} PDB: 4afg_A* 4b5d_A*
Probab=98.52 E-value=3.9e-07 Score=69.78 Aligned_cols=64 Identities=11% Similarity=0.261 Sum_probs=51.2
Q ss_pred ceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 90 EILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 90 ~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|... +..++|++||+|.|+
T Consensus 56 ~~~~t~~~~l~~~W~D~rL~wnp~~~~~i~~i~l~----~~~IW~PDi~l~N~~~~~~~~~~--~~~v~v~~~G~V~~~ 128 (230)
T 4afh_A 56 NSIGTFKAIVKLSWVDTILRWDPEPPFDFQKIEIS----PDEIWTPDIKLFNSVDLDMTLDR--TTQAIVFSNGTVLWI 128 (230)
T ss_dssp EEEEEEEEEEEEEEECGGGCCCCCTTSCCSEEEEC----GGGSCCCCEEETTCSSSSCEECT--TSCEEEETTSEEEEC
T ss_pred CcEEEEEEEEeeEEECccccCCcccCCCeeEEEec----cCCEECCcEEEEecccccccccc--cceEEEEcCCEEEEe
Confidence 778999999999998732 23455553 27999999999999999998743 345799999999986
No 28
>3igq_A GLR4197 protein; plgic Cys-loop, membrane protein, transport protein; 2.30A {Gloeobacter violaceus}
Probab=98.47 E-value=1.1e-07 Score=71.32 Aligned_cols=66 Identities=23% Similarity=0.403 Sum_probs=50.4
Q ss_pred CceeEEEeEEEeecccccc-----ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 89 GEILYMLSIIENNTNKRKQ-----KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 89 G~v~ys~rl~l~~tc~~~~-----~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
-+..++..+.+++.|.|.. ....+.. .....++||+||++|.|++++.. .+|..++|++||+|.|+
T Consensus 33 ~~~~~t~~~~l~~~W~D~rL~w~~~~~~i~~-~~~~~~~IW~PDi~l~N~~~~~~----~~~~~v~v~~~G~V~~~ 103 (201)
T 3igq_A 33 KAETFKVNAFLSLSWKDRRLAFDPVRSGVRV-KTYEPEAIWIPEIRFVNVENARD----ADVVDISVSPDGTVQYL 103 (201)
T ss_dssp TSSEEEEEEEEEEEEECGGGCCCHHHHTCSC-EECCGGGSCCCCEEESSBSSSCE----EEEEEEEECTTCEEEEE
T ss_pred cCCEEEEEEEEeeEEECCccCCCCcCCCEeE-ecccccCcCccCEEEEccccccc----ccceEEEEeCCCcEEEe
Confidence 4567899999999998742 1123333 23445899999999999988764 45889999999999986
No 29
>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=98.46 E-value=2.6e-07 Score=75.26 Aligned_cols=66 Identities=15% Similarity=0.355 Sum_probs=53.4
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
..+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|..+.+|. +|++||+|.|
T Consensus 47 e~~~~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~----~~~IW~PDi~~~N~~~~~~~~~~~~~~--~i~~~G~V~~ 120 (369)
T 2bg9_C 47 ETDETLTTNVWMDHAWYDHRLTWNASEYSDISILRLR----PELIWIPDIVLQNNNDGQYNVAYFCNV--LVRPNGYVTW 120 (369)
T ss_dssp TTTTEEEEEEEEEEEEECTTTCCCCCCCCTCSCEEEC----GGGSCCCCEEETTTCSSCCBSSSSCCE--EECSSSEEEE
T ss_pred ccccceEEEEEEeeeeECCCcccCccccCCeeEEEec----HHhccCCcEeccccccccccccccccE--EEECCccEEE
Confidence 45678999999999999742 22455552 379999999999999999999887774 6899999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 121 ~ 121 (369)
T 2bg9_C 121 L 121 (369)
T ss_dssp C
T ss_pred e
Confidence 6
No 30
>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=98.45 E-value=2.7e-07 Score=75.13 Aligned_cols=66 Identities=17% Similarity=0.326 Sum_probs=53.3
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
..+..++..+.+++.|.|.. ....+.++ . ++||+||++|.|++++.+|..+..|.+ |++||+|.|
T Consensus 44 e~~~~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~-~---~~IW~PDi~~~N~~~~~~~~~~~~~~~--v~~~G~V~~ 117 (370)
T 2bg9_E 44 EKEEALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIP-S---ELLWLPDVVLENNVDGQFEVAYYANVL--VYNDGSMYW 117 (370)
T ss_dssp TTTTEEEEEEEEEEEEECGGGCCCTTTTTTCSCBCCC-G---GGSCCCCEEESSSCCSCCBSSSSCCCE--ECSSSEEEE
T ss_pred hcccceeEeEEEeeEEECCCcCCChhhcCCeeEEeec-h---hccCCCCEeeccccCCcccccccccEE--EECCccEEE
Confidence 45678999999999999742 12445552 2 799999999999999999988887864 799999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 118 ~ 118 (370)
T 2bg9_E 118 L 118 (370)
T ss_dssp C
T ss_pred e
Confidence 6
No 31
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=98.45 E-value=2e-07 Score=74.34 Aligned_cols=67 Identities=24% Similarity=0.438 Sum_probs=52.9
Q ss_pred CCceeEEEeEEEeecccccc-----ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 88 DGEILYMLSIIENNTNKRKQ-----KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~-----~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
.-+..++..+.+++.|.|.. ....+.. .....++||+||++|.|++++. +.+|..+++++||+|.|+
T Consensus 36 e~~~~~t~~~~l~~~W~D~rL~w~~~~~~i~~-~~~~~~~IW~PDi~l~N~~~~~----~~~~~~~~v~~~G~V~~~ 107 (321)
T 3tlw_A 36 DCAETFKVNAFLSLSWKDRRLAFDPVRSGVRV-KTYEPEAIWIPEIRFVNVENAR----DADVVDISVSPDGTVQYL 107 (321)
T ss_dssp TTTTEEEEEEEEEEEEECGGGCCCSTTTCCSS-EECCGGGSCCCCEEESSBSSCC----EEEEEEEEECTTCEEEEE
T ss_pred ccCcEEEEEEEEeeEEECcccCCCCccCCeee-ecccccCeEcCcEEeecccccc----cccceeEEEeCCccEEEe
Confidence 35568899999999999842 2222444 2445689999999999999998 567899999999999986
No 32
>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=98.44 E-value=2.3e-07 Score=75.54 Aligned_cols=66 Identities=14% Similarity=0.258 Sum_probs=52.9
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
..+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|..+ +..++|++||+|.|
T Consensus 45 e~~~~~~~~~~l~~~W~D~rL~w~p~~~~~i~~l~v~----~~~IW~PDi~~~N~~~~~~~~~~--~~~~~i~~~G~V~~ 118 (370)
T 2bg9_A 45 EVNQIVETNVRLRQQWIDVRLRWNPADYGGIKKIRLP----SDDVWLPDLVLYNNADGDFAIVH--MTKLLLDYTGKIMW 118 (370)
T ss_dssp TTTTEEEEEEEEEEEECCTTSCCCTTTHHHHSSEEEE----GGGSCCCCEEETTCCCSCEESCS--SCEEEECSSCCEEE
T ss_pred hhccceEEEEEEeeeeECCCccCChhhcCCccEEEec----hhhccCCcEeccccccccccccc--cceEEEECCeeEEE
Confidence 45678999999999999842 12344442 47999999999999999999764 56799999999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 119 ~ 119 (370)
T 2bg9_A 119 T 119 (370)
T ss_dssp C
T ss_pred e
Confidence 6
No 33
>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=98.41 E-value=2.8e-07 Score=75.04 Aligned_cols=66 Identities=17% Similarity=0.292 Sum_probs=52.8
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
..+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|..+..| +++++||+|.|
T Consensus 45 e~~~~~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~----~~~IW~PDi~~~N~~~~~~~~~~~~~--~~v~~~G~V~~ 118 (370)
T 2bg9_B 45 EKNEEMTTSVFLNLAWTDYRLQWDPAAYEGIKDLSIP----SDDVWQPDIVLMNNNDGSFEITLHVN--VLVQHTGAVSW 118 (370)
T ss_dssp TTTTEEEEEEECEEEEECTTSCCCTTTTSSCSEEEEE----SSSSCCCCEEESSCCCSCEESSSSCE--EEEETTSEEEE
T ss_pred ccccceEEEEEEeeeeECcccCcCccccCCeeEEEec----hhhccCCCccccccccccccccccce--EEEeCCceEEE
Confidence 45678999999999998732 22445552 27999999999999999999887776 46899999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 119 ~ 119 (370)
T 2bg9_B 119 H 119 (370)
T ss_dssp C
T ss_pred E
Confidence 6
No 34
>3sq6_A ACHBP, neuronal acetylcholine receptor subunit alpha-7, acetylcholine-binding protein; nicotinic receptor; HET: EPJ NAG; 2.80A {Homo sapiens} SCOP: b.96.1.1 PDB: 3sq9_A*
Probab=98.37 E-value=5.5e-07 Score=67.63 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=49.7
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCccc--ceeeecccCceEEEEecCCcE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKH--AEFQYVTVPNVLVRINPDGEI 156 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~--s~~h~~~~~n~~~~i~~~G~v 156 (160)
.-+..++..+.+++.|.|.. ....+.++ .++||+||++|.|+++ +.+|.. .++|++||+|
T Consensus 43 e~~~~~t~~~~~~~~W~D~rL~w~~~~~~~i~~i~~~----~~~iW~PDi~~~N~~~~~~~~~~~-----~v~v~~~G~V 113 (204)
T 3sq6_A 43 EKNQVVDVVFWLQMSWTDHYLQWNVSEYPGVKQVSVP----ISSLWVPDLAAYNAISKPEVLTPQ-----LALVNSSGHV 113 (204)
T ss_dssp TTTTEEEEEEEEEEEEECGGGCCCTTTSSSCCEEEEE----GGGSCCCCEEETTBSSCCEECSCC-----EEEEETTSEE
T ss_pred ccccEEEEEEeeeeEEECCCcccChHHcCCccEEEcC----HHHCcCCCEEeEcccccCCccccc-----EEEEEeCCEE
Confidence 34568899999999999742 22444452 3799999999999999 888763 8899999999
Q ss_pred EEe
Q psy10725 157 LYM 159 (160)
Q Consensus 157 ~~s 159 (160)
.|+
T Consensus 114 ~~~ 116 (204)
T 3sq6_A 114 QYL 116 (204)
T ss_dssp EEC
T ss_pred EEe
Confidence 986
No 35
>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C
Probab=98.22 E-value=1.7e-06 Score=73.58 Aligned_cols=65 Identities=17% Similarity=0.379 Sum_probs=52.8
Q ss_pred CceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 89 GEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 89 G~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
-+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|..+..|.+ |++||+|.|+
T Consensus 69 ~~q~~t~~vwl~q~W~D~RL~Wnp~~y~gi~~l~vp----~~~IW~PDi~l~N~~d~~~~~~~~~nv~--V~~dG~V~~~ 142 (522)
T 4aq5_C 69 TDETLTTNVWMDHAWYDHRLTWNASEYSDISILRLR----PELIWIPDIVLQNNNDGQYNVAYFCNVL--VRPNGYVTWL 142 (522)
T ss_dssp TTTEEEEEEEEEEEEECTTCCCCCCCCCTCSCEEEC----GGGSCCCCEEETTTCSSCCBSCSSCCEE--ECSSSEEEEC
T ss_pred cccEEEEEEEEeeeEeCcccCCCchhcCCceEEeec----cCCEECCcEeccccccCCccccccceEE--EeCCccEEEE
Confidence 4567999999999999732 23455553 2789999999999999999998888864 8999999986
No 36
>4aod_A Acetylcholine-binding protein type 1; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholine receptor; 6.00A {Biomphalaria glabrata}
Probab=98.21 E-value=1.7e-06 Score=65.11 Aligned_cols=65 Identities=18% Similarity=0.317 Sum_probs=48.8
Q ss_pred CCceeEEEeEEEeecccccc--------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 88 DGEILYMLSIIENNTNKRKQ--------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~--------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
.-+..++..+.+++.|.|.. ....+.+ ..++||+||++|.|++++.. ...+..++|++||+|.|+
T Consensus 45 e~~q~~t~~~wl~~~W~D~rL~W~~~~~~i~~i~v----~~~~IW~PDi~l~N~~~~~~---~~~~~~~~v~~~G~V~~~ 117 (205)
T 4aod_A 45 VENDEVDIGLWTTLVWKDRCLNWFNEFTSFKELTV----PIAEIWTPDIFIFDSVGAPE---IFSDKLARVSQDGTVTYV 117 (205)
T ss_dssp TTTTEEEEEEEEEEEEECCCCCCSCCCSCCCEEEE----EGGGSCCCCEEETTBSSCCE---ECSCCEEEEETTSEEEEC
T ss_pred ccCCEEEEEEEEEEEEECCceeeCCcCCCccEeec----cHHhcCcCCEEEEcccccce---eecceEEEEecCCEEEEe
Confidence 34567889999999998732 1233334 23689999999999987643 356778999999999986
No 37
>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A
Probab=98.20 E-value=1.1e-06 Score=73.58 Aligned_cols=66 Identities=14% Similarity=0.292 Sum_probs=52.0
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
.-+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|.....| ++|++||+|.|
T Consensus 69 E~~q~~t~~~~l~~~W~D~rL~Wnp~~y~gi~~l~vp----~~~IW~PDi~l~N~~d~~~~~~~~~~--v~v~~dG~V~~ 142 (461)
T 4aq5_A 69 EVNQIVETNVRLRQQWIDVRLRWNPADYGGIKKIRLP----SDDVWLPDLVLYNNADGDFAIVHMTK--LLLDYTGKIMW 142 (461)
T ss_dssp TTTTEEEEEEEEEEEECCTTCBCCTTTHHHHSSEEEE----GGGSCCCCEEESSCCCSCCTTCSSCE--EEECSBCCEEE
T ss_pred ccceEEEEEEEEeeeeECcccCCChhhcCCccEEEec----CCCEECCceeeecccccccccccccc--eEEcCCccEEE
Confidence 34568899999999999842 22455552 27899999999999999999765444 79999999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 143 ~ 143 (461)
T 4aq5_A 143 T 143 (461)
T ss_dssp C
T ss_pred e
Confidence 6
No 38
>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E
Probab=98.17 E-value=1.5e-06 Score=73.35 Aligned_cols=65 Identities=17% Similarity=0.310 Sum_probs=52.4
Q ss_pred CceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 89 GEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 89 G~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
-+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|..+..|.+ |++||+|.|+
T Consensus 45 ~~q~~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v~----~~~IW~PDi~l~N~~d~~~~~~~~~nv~--v~~~G~V~~~ 118 (488)
T 4aq5_E 45 KEEALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIP----SELLWLPDVVLENNVDGQFEVAYYANVL--VYNDGSMYWL 118 (488)
T ss_dssp TTTBEEEEEEEEEEEECCTTCCCTTTTTTCSCCCCC----TTSSCCCCEECSSSCCSCCBSCSSSCCC--BCTTSEEEEC
T ss_pred ccceeeeeeeeeeEEECcccCcCchhcCCceEEecC----ccCEECCceehhccccccccccccccEE--EeCCceEEEe
Confidence 3457899999999998732 23455553 2789999999999999999998888865 8999999986
No 39
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=98.16 E-value=2.5e-06 Score=72.04 Aligned_cols=66 Identities=17% Similarity=0.292 Sum_probs=53.0
Q ss_pred CCceeEEEeEEEeecccccc---------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEE
Q psy10725 88 DGEILYMLSIIENNTNKRKQ---------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILY 158 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~---------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~ 158 (160)
.-+..++..+.+++.|.|.. ....+.++ .++||+||++|.|++++.+|..+..|. .|++||+|.|
T Consensus 69 E~~q~~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v~----~~~IW~PDi~l~N~~d~~~~~~~~~nv--~v~~~G~V~~ 142 (493)
T 4aq5_B 69 EKNEEMTTSVFLNLAWTDYRLQWDPAAYEGIKDLSIP----SDDVWQPDIVLMNNNDGSFEITLHVNV--LVQHTGAVSW 142 (493)
T ss_dssp TTTTEEEEEEECEEEEECTTCCCCHHHHSSCSCEEEC----SCSSCCCCCEESSCCCSCEESSSSSCE--EECTTSEEEE
T ss_pred ccceEEEEEEEeecceECcccCCChhhcCCeeEEecc----cccCccCcEEEecccccccccccccce--EEecCCCEEE
Confidence 34568899999999999732 23455553 268999999999999999998887775 5899999998
Q ss_pred e
Q psy10725 159 M 159 (160)
Q Consensus 159 s 159 (160)
+
T Consensus 143 ~ 143 (493)
T 4aq5_B 143 H 143 (493)
T ss_dssp C
T ss_pred e
Confidence 6
No 40
>4aoe_A Acetylcholine-binding protein type 2; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholin receptor; 5.80A {Biomphalaria glabrata}
Probab=98.14 E-value=2.9e-06 Score=63.82 Aligned_cols=65 Identities=23% Similarity=0.248 Sum_probs=49.0
Q ss_pred CCceeEEEeEEEeecccccc--------ccceeeCCChhhhcccccccceecCcccceeeecccCceEEEEecCCcEEEe
Q psy10725 88 DGEILYMLSIIENNTNKRKQ--------KRKALDLNDPNLVKAIWKPEVYFPNAKHAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 88 dG~v~ys~rl~l~~tc~~~~--------~~~~l~l~~~~~~~~iW~Pd~~f~n~k~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
.-+..++..+.+++.|.|.. ....+.++ .++||+||++|.|+++...+ ..+.+++|++||+|.|+
T Consensus 45 e~~q~~~~~~wl~~~W~D~rL~W~~~~~~i~~i~v~----~~~IW~PDi~l~N~~~~~~~---~~~~~v~v~~~G~V~~~ 117 (205)
T 4aoe_A 45 VGTDQVELGLWLVISWKDRSLSWSNECTTFNELTLP----SKYIWLPHIEVYNSIGKPGI---HSDQLVRVYKDGTVTFV 117 (205)
T ss_dssp TTTTEEEEEEEEEEEEECCCCCCSCCCSCCCEEEEE----GGGSCCCCCEETTBSSCCEE---CSCCEEEEETTSEEEEC
T ss_pred ccCCEEEEEEEEEEEEECCccccCCcCCCccEEEeC----HHHhccccEEEecccccccc---ccceEEEEeCCcEEEEe
Confidence 34567888999999998732 22344442 26899999999998876543 45778999999999986
No 41
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=44.59 E-value=11 Score=21.18 Aligned_cols=13 Identities=46% Similarity=0.797 Sum_probs=10.8
Q ss_pred ceEEEEecCCcEE
Q psy10725 145 NVLVRINPDGEIL 157 (160)
Q Consensus 145 n~~~~i~~~G~v~ 157 (160)
..+|+|.|||+|-
T Consensus 16 Gf~LqI~PdG~V~ 28 (48)
T 3ol0_A 16 GQYLRINPDGTVD 28 (48)
T ss_dssp CCEEEECTTSBEE
T ss_pred cEEeEECCCCCCc
Confidence 3589999999984
No 42
>3d8m_A BPP, baseplate protein, receptor binding protein; lactococcal phage P2, lactococcal phage TP901-1, receptor BI protein; 3.35A {Lactococcus phage tp901-1}
Probab=36.93 E-value=39 Score=23.99 Aligned_cols=37 Identities=22% Similarity=0.487 Sum_probs=28.1
Q ss_pred ccccccceecCccccee-eecccCce-EEEEecCCcEEE
Q psy10725 122 AIWKPEVYFPNAKHAEF-QYVTVPNV-LVRINPDGEILY 158 (160)
Q Consensus 122 ~iW~Pd~~f~n~k~s~~-h~~~~~n~-~~~i~~~G~v~~ 158 (160)
--|+|..|-.+..++.+ |.....|. -+-|.|||.+.+
T Consensus 106 g~wvp~~f~P~~~~slvgH~ag~~~sfHIdi~p~G~~~w 144 (165)
T 3d8m_A 106 GTWVDRPFRPAAVQSLVGHFAGRDTSFHIDINPNGSITW 144 (165)
T ss_dssp SCCCCGGGCCSSCEEEEEEETTSSCEEEEEECTTSCEEE
T ss_pred cceecCCccccceeEeeeeeccCcceeEEEeCCCCcEEE
Confidence 48999999988887766 66655554 567779999865
No 43
>3da0_A Cleaved chimeric receptor binding protein from bacteriophages TP901-1 and P2; lactococcal phage P2; 1.65A {Lactococcus phage tp901-1}
Probab=29.37 E-value=66 Score=21.95 Aligned_cols=39 Identities=21% Similarity=0.477 Sum_probs=29.3
Q ss_pred hcccccccceecCccccee-eecccCce-EEEEecCCcEEE
Q psy10725 120 VKAIWKPEVYFPNAKHAEF-QYVTVPNV-LVRINPDGEILY 158 (160)
Q Consensus 120 ~~~iW~Pd~~f~n~k~s~~-h~~~~~n~-~~~i~~~G~v~~ 158 (160)
...-|+|-.|-.+.-++.+ |-....|+ =+-|.|||.+.|
T Consensus 72 m~~~wV~~pfrP~~~~sLvGH~ag~~nSFHIDi~p~Gs~tW 112 (136)
T 3da0_A 72 MSGTWVDRPFRPAAVQSLVGHFAGRDTSFHIDINPNGSITW 112 (136)
T ss_dssp CSSCCCCGGGCCSSCEEEEEEETTSSCEEEEEECTTSCEEE
T ss_pred eccceecCCcCccceEEEEEEEcCCCceeEEEeCCCceEEE
Confidence 3457999999988777765 66666666 467789999865
No 44
>1zru_A Lactophage P2 receptor binding protein; domains: beta barrel, beta prism, beta barrel, structural structural proteomics in europe; 1.73A {Lactococcus lactis phage P2} SCOP: b.21.1.3 b.108.1.4 b.163.1.2 PDB: 2bsd_A 2bse_A 2x53_A 2x54_A 2x5a_A 2wzp_A
Probab=21.98 E-value=94 Score=23.59 Aligned_cols=39 Identities=21% Similarity=0.477 Sum_probs=28.0
Q ss_pred hcccccccceecCccccee-eecccCce-EEEEecCCcEEE
Q psy10725 120 VKAIWKPEVYFPNAKHAEF-QYVTVPNV-LVRINPDGEILY 158 (160)
Q Consensus 120 ~~~iW~Pd~~f~n~k~s~~-h~~~~~n~-~~~i~~~G~v~~ 158 (160)
..--|+|..|..+.-++.+ |.....|. .+-|.|||.+.+
T Consensus 203 ~~g~wI~~pfrP~~~~~l~gH~agt~nSfhIDInPnGsirw 243 (264)
T 1zru_A 203 MSGTWVDRPFRPAAVQSLVGHFAGRDTSFHIDINPNGSITW 243 (264)
T ss_dssp CSSCCCCGGGCCSSCEEEEEEETTSSCEEEEEECTTSCEEE
T ss_pred eecceecCCCCccceEEEEEEecCCCceEEEEeCCCCcEEE
Confidence 3457999999877666655 66666654 667789999865
No 45
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=21.74 E-value=87 Score=19.79 Aligned_cols=25 Identities=12% Similarity=0.060 Sum_probs=21.5
Q ss_pred cceeeecccCceEEEEecCCcEEEe
Q psy10725 135 HAEFQYVTVPNVLVRINPDGEILYM 159 (160)
Q Consensus 135 ~s~~h~~~~~n~~~~i~~~G~v~~s 159 (160)
.-.++.+-..|..+.|+.||.++|+
T Consensus 16 aP~i~GiA~s~A~V~v~qnG~~iy~ 40 (90)
T 3fcg_A 16 APVVRGIARTQARVEVLRDGYTVSN 40 (90)
T ss_dssp EEEEEEEESSSEEEEEESSSCEEEE
T ss_pred CceEEEEEcCCcEEEEEECCEEEEE
Confidence 3457888888999999999999996
No 46
>2f0c_A Phage TP901-1 ORF49 (BPP); beta-barrel, beta prism, 3 helix parallel bundle, virus-VIRA complex; 1.65A {Lactococcus phage tp901-1} SCOP: b.21.1.3 b.108.1.4 PDB: 3ejc_A 3hg0_A
Probab=21.51 E-value=82 Score=22.83 Aligned_cols=39 Identities=15% Similarity=0.178 Sum_probs=28.0
Q ss_pred hcccccccceecCccccee-eecccCce-EEEEecCCcEEE
Q psy10725 120 VKAIWKPEVYFPNAKHAEF-QYVTVPNV-LVRINPDGEILY 158 (160)
Q Consensus 120 ~~~iW~Pd~~f~n~k~s~~-h~~~~~n~-~~~i~~~G~v~~ 158 (160)
..--|+|..|-.+...+.+ |-....|. -+-|.|||.+.+
T Consensus 132 ~s~~~VP~gFRP~~~~sLvgH~ag~~nSfHIDi~pdGsi~W 172 (191)
T 2f0c_A 132 LVNRSVPNEFCPRNRCSLVGHMVGGWNAFHIDIPSSGVCQW 172 (191)
T ss_dssp CCSCCCCGGGCCSSCEEEEEEETTSSCEEEEEECTTCCCEE
T ss_pred eeccccCCCCCcccceEEEEEecCCCceeEEEeCCCCcEEE
Confidence 3467999999887777765 44444444 677789999865
Done!