BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1073
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7Z5P4|DHB13_HUMAN 17-beta-hydroxysteroid dehydrogenase 13 OS=Homo sapiens GN=HSD17B13
PE=2 SV=1
Length = 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 34/39 (87%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
+A LPSM+ERNHGH+V ++S+CG G+P ++PYCSSKFA
Sbjct: 153 KALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFA 191
>sp|Q5M875|DHB13_RAT 17-beta-hydroxysteroid dehydrogenase 13 OS=Rattus norvegicus
GN=Hsd17b13 PE=2 SV=1
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
++A LPSM+ RN GH+V ++S+CG +P ++PYCSSKFA
Sbjct: 152 IKALLPSMLRRNSGHIVTVASVCGHRVIPYLIPYCSSKFA 191
>sp|A5PJJ7|S16C6_BOVIN Short-chain dehydrogenase/reductase family 16C member 6 OS=Bos
taurus GN=SDR16C6 PE=2 SV=1
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
T +AFLP+M+E NHGH+V +SS G++G+ + YC+SKFA
Sbjct: 152 TYKAFLPAMLEANHGHLVCISSFAGIVGINELSDYCASKFA 192
>sp|Q8VCR2|DHB13_MOUSE 17-beta-hydroxysteroid dehydrogenase 13 OS=Mus musculus GN=Hsd17b13
PE=1 SV=2
Length = 304
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
++A LPSM+ RN GH+V ++S+CG +P ++PYCSSKFA
Sbjct: 152 IKALLPSMLRRNSGHIVTVASVCGHGVIPYLIPYCSSKFA 191
>sp|Q5NVG2|DHB11_PONAB Estradiol 17-beta-dehydrogenase 11 OS=Pongo abelii GN=HSD17B11 PE=2
SV=1
Length = 300
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVREGHNIYLGSWERTEMNY 95
T +AFLP+M++ NHGH+V ++S G + +P ++ YCSSKFA H E+
Sbjct: 151 TTKAFLPAMMKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTD-----ELAA 205
Query: 96 LFLAHCITTC 105
L + TTC
Sbjct: 206 LQITGVKTTC 215
>sp|Q8NBQ5|DHB11_HUMAN Estradiol 17-beta-dehydrogenase 11 OS=Homo sapiens GN=HSD17B11 PE=1
SV=3
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVREGHNIYLGSWERTEMNY 95
T +AFLP+M + NHGH+V ++S G + +P ++ YCSSKFA H E+
Sbjct: 151 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTD-----ELAA 205
Query: 96 LFLAHCITTC 105
L + TTC
Sbjct: 206 LQITGVKTTC 215
>sp|Q4JK73|DHB11_MACFA Estradiol 17-beta-dehydrogenase 11 OS=Macaca fascicularis
GN=HSD17B11 PE=2 SV=1
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVREGHNIYLGSWERTEMNY 95
T +AFLP+M++ NHGHVV ++S G + +P ++ YCSSKF+ H E+
Sbjct: 151 TTKAFLPAMMKNNHGHVVTVASAAGHISVPFLLAYCSSKFSAVGFHKAL-----TDELAA 205
Query: 96 LFLAHCITTC 105
L + TTC
Sbjct: 206 LQITGVKTTC 215
>sp|Q05A13|S16C6_MOUSE Short-chain dehydrogenase/reductase family 16C member 6 OS=Mus
musculus GN=Sdr16c6 PE=2 SV=1
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
T +AFLP+M++ NHGH+V +SS+ G++G+ + Y SSKFA
Sbjct: 152 TCKAFLPAMVKANHGHLVCISSIAGLVGINGLSDYSSSKFA 192
>sp|Q7TQA3|RDHE2_MOUSE Epidermal retinol dehydrogenase 2 OS=Mus musculus GN=Sdr16c5 PE=2
SV=1
Length = 309
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
+AFLP+MI NHGH+V +SS G++G+ + YC+SKFA
Sbjct: 158 KAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKFA 196
>sp|Q5XGF7|RDH10_XENTR Retinol dehydrogenase 10 OS=Xenopus tropicalis GN=rdh10 PE=2 SV=1
Length = 341
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP M+E NHGH+V+++S G+ V YC+SKF V
Sbjct: 176 TTKAFLPKMMEMNHGHIVSVASSLGLFSTAGVEDYCASKFGV 217
>sp|Q6NRV4|RD10B_XENLA Retinol dehydrogenase 10-B OS=Xenopus laevis GN=rdh10-b PE=2 SV=1
Length = 341
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP M+E NHGH+V+++S G+ V YC+SKF V
Sbjct: 176 TTKAFLPKMMEMNHGHIVSVASSLGLFSTAGVEDYCASKFGV 217
>sp|Q6AYS8|DHB11_RAT Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus GN=Hsd17b11
PE=2 SV=1
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
T +AFLP+M++ NHGHVV ++S G +P ++ YCSSKFA
Sbjct: 151 TTKAFLPAMMKNNHGHVVTVASAAGHTVVPFLLAYCSSKFA 191
>sp|Q8N3Y7|RDHE2_HUMAN Epidermal retinol dehydrogenase 2 OS=Homo sapiens GN=SDR16C5 PE=2
SV=2
Length = 309
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP+MI +HGH+V +SS G+ G+ + YC+SKFA
Sbjct: 156 TYKAFLPAMIANDHGHLVCISSSAGLSGVNGLADYCASKFAA 197
>sp|Q6DCT3|RD10A_XENLA Retinol dehydrogenase 10-A OS=Xenopus laevis GN=rdh10-a PE=2 SV=1
Length = 341
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP M+E NHGH+V+++S G+ V YC+SKF V
Sbjct: 176 TTKAFLPKMMELNHGHIVSVASSLGLFSTAGVEDYCASKFGV 217
>sp|Q8IZV5|RDH10_HUMAN Retinol dehydrogenase 10 OS=Homo sapiens GN=RDH10 PE=1 SV=1
Length = 341
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP+M+E NHGH+V ++S G+ V YC+SKF V
Sbjct: 176 TTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGV 217
>sp|Q8HZT6|RDH10_BOVIN Retinol dehydrogenase 10 OS=Bos taurus GN=RDH10 PE=1 SV=1
Length = 341
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP+M+E NHGH+V ++S G+ V YC+SKF V
Sbjct: 176 TTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGV 217
>sp|Q80ZF7|RDH10_RAT Retinol dehydrogenase 10 OS=Rattus norvegicus GN=Rdh10 PE=1 SV=1
Length = 341
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP+M+E NHGH+V ++S G+ V YC+SKF V
Sbjct: 176 TTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGV 217
>sp|Q9VHT4|FUCT1_DROME Probable GDP-fucose transporter OS=Drosophila melanogaster GN=Gfr
PE=2 SV=1
Length = 337
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 2 PQLPYVNDKIWLVSYYNNVYAVALFIPIIFICGETLEAFL--PSMIERNHGHVVALSSMC 59
L YVN ++WL+SYYNN+Y+ LF+P+I I GE LE+ + P + + LS +C
Sbjct: 196 KSLGYVNQEVWLLSYYNNLYSTLLFLPLIIINGE-LESIITYPHLWASWFWAAMTLSGLC 254
Query: 60 G 60
G
Sbjct: 255 G 255
>sp|Q8VCH7|RDH10_MOUSE Retinol dehydrogenase 10 OS=Mus musculus GN=Rdh10 PE=1 SV=2
Length = 341
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP+M+E NHGH+V ++S G+ V YC+SKF V
Sbjct: 176 TTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGV 217
>sp|Q9EQ06|DHB11_MOUSE Estradiol 17-beta-dehydrogenase 11 OS=Mus musculus GN=Hsd17b11 PE=2
SV=1
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
T +AFLP M++ NHGH+V ++S G +P ++ YCSSKFA
Sbjct: 151 TTKAFLPVMMKNNHGHIVTVASAAGHTVVPFLLAYCSSKFA 191
>sp|Q7T2D1|RD10B_DANRE Retinol dehydrogenase 10-B OS=Danio rerio GN=rdh10b PE=2 SV=2
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
T +AFLP M+E NHGH+V ++S G+ V YC+SKF
Sbjct: 171 TTKAFLPKMLELNHGHIVTVASSLGLFTTAGVEDYCASKFG 211
>sp|A1L1W4|RD10A_DANRE Retinol dehydrogenase 10-A OS=Danio rerio GN=rdh10a PE=2 SV=1
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFA 76
T +AFLP M+E NHGH+V ++S G+ V YC+SKF
Sbjct: 174 TTKAFLPKMLEMNHGHIVTVASSLGLFSTAGVEDYCASKFG 214
>sp|P51657|DHB1_RAT Estradiol 17-beta-dehydrogenase 1 OS=Rattus norvegicus GN=Hsd17b1
PE=1 SV=1
Length = 344
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
L+AFLP M R+ G V+ +S+ G++GLP YC+SKFA+
Sbjct: 123 LQAFLPDMKRRHSGRVLVTASVGGLMGLPFHEVYCASKFAL 163
>sp|P51656|DHB1_MOUSE Estradiol 17-beta-dehydrogenase 1 OS=Mus musculus GN=Hsd17b1 PE=2
SV=1
Length = 344
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
L+AFLP M R+ G V+ +S+ G++GLP YC+SKFA+
Sbjct: 123 LQAFLPDMKRRHSGRVLVTASVGGLMGLPFHEVYCASKFAL 163
>sp|Q556J2|KDSR_DICDI 3-ketodihydrosphingosine reductase OS=Dictyostelium discoideum
GN=ksrA-1 PE=3 SV=1
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 16/72 (22%)
Query: 9 DKIWLVSYYNNVYAVALFIPIIFICGETLEAFLPSMIER--NHGHVVALSSMCGVLGLPN 66
+K + Y+ ++YA +P+ MIE GH+V +SS CG++G+P
Sbjct: 147 EKTMQLDYFGSLYATKEVVPL--------------MIENGGQGGHIVFVSSTCGLVGVPG 192
Query: 67 VVPYCSSKFAVR 78
YC SKFA+R
Sbjct: 193 YSTYCPSKFALR 204
>sp|Q5ZJZ5|BDH_CHICK D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Gallus
gallus GN=BDH1 PE=2 SV=1
Length = 339
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T +AFLP +I R+ G VV +SSM G +G P PYC +KF V
Sbjct: 171 TTKAFLP-LIRRSKGRVVNISSMMGRMGSPARSPYCITKFGV 211
>sp|Q99J47|DRS7B_MOUSE Dehydrogenase/reductase SDR family member 7B OS=Mus musculus
GN=Dhrs7b PE=2 SV=1
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVR 78
+A LPSM+ER GH+VA+SS+ G + +P Y +SK A +
Sbjct: 173 KALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQ 213
>sp|P25970|Y5909_MYXXD Uncharacterized oxidoreductase MXAN_5909 OS=Myxococcus xanthus
(strain DK 1622) GN=MXAN_5909 PE=3 SV=2
Length = 253
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSK 74
TL A LP M+ER GH+V +SS+ G GL Y +SK
Sbjct: 121 TLSAVLPQMVERKRGHLVGVSSLAGFRGLAGHAAYSASK 159
>sp|Q5RJY4|DRS7B_RAT Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus
GN=Dhrs7b PE=1 SV=1
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVR 78
+A LPSM+ER GH+VA+SS+ G + +P Y +SK A +
Sbjct: 175 KALLPSMVERKRGHIVAISSIQGKISIPFRSAYAASKHATQ 215
>sp|Q1WNP0|DHB1_PANTR Estradiol 17-beta-dehydrogenase 1 OS=Pan troglodytes GN=HSD17B1
PE=3 SV=3
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
L+AFLP M R G V+ S+ G++GLP YC+SKFA+
Sbjct: 123 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 163
>sp|P14061|DHB1_HUMAN Estradiol 17-beta-dehydrogenase 1 OS=Homo sapiens GN=HSD17B1 PE=1
SV=3
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
L+AFLP M R G V+ S+ G++GLP YC+SKFA+
Sbjct: 123 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 163
>sp|Q6IAN0|DRS7B_HUMAN Dehydrogenase/reductase SDR family member 7B OS=Homo sapiens
GN=DHRS7B PE=1 SV=2
Length = 325
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVREGHNIYLGSWERTEM 93
+A LPSMI+R GH+VA+SS+ G + +P Y +SK A + + E+ E+
Sbjct: 175 KALLPSMIKRRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEMEQYEI 230
>sp|Q9Y394|DHRS7_HUMAN Dehydrogenase/reductase SDR family member 7 OS=Homo sapiens
GN=DHRS7 PE=1 SV=1
Length = 339
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 41 LPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVR 78
LP MIER G +V ++S+ G++ +P + YC+SK A+R
Sbjct: 174 LPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALR 211
>sp|Q5R6U1|DRS7B_PONAB Dehydrogenase/reductase SDR family member 7B OS=Pongo abelii
GN=DHRS7B PE=2 SV=2
Length = 325
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVREGHNIYLGSWERTEM 93
+A LPSMI+R GH+VA+SS+ G + +P Y +SK A + + E+ E+
Sbjct: 175 KALLPSMIKRRQGHIVAISSIQGKISIPFRSAYAASKHATQAFFDCLRAEMEQYEI 230
>sp|Q3T0R4|DRS7B_BOVIN Dehydrogenase/reductase SDR family member 7B OS=Bos taurus
GN=DHRS7B PE=2 SV=1
Length = 325
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVR 78
+A LP+MI R GHVVA+SS+ G + LP Y +SK A +
Sbjct: 175 KALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQ 215
>sp|O75911|DHRS3_HUMAN Short-chain dehydrogenase/reductase 3 OS=Homo sapiens GN=DHRS3 PE=1
SV=2
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSK 74
T +AFLP M+E +GH+V L+S+ + +P + YC+SK
Sbjct: 154 TTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSK 192
>sp|O88876|DHRS3_MOUSE Short-chain dehydrogenase/reductase 3 OS=Mus musculus GN=Dhrs3 PE=2
SV=2
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSK 74
T +AFLP M+E +GH+V L+S+ + +P + YC+SK
Sbjct: 154 TTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSK 192
>sp|O77769|DHRS3_BOVIN Short-chain dehydrogenase/reductase 3 OS=Bos taurus GN=DHRS3 PE=2
SV=1
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSK 74
T +AFLP M+E +GH+V L+S+ + +P + YC+SK
Sbjct: 154 TTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSK 192
>sp|O53302|SADH_MYCTU Putative oxidoreductase SadH OS=Mycobacterium tuberculosis GN=sadH
PE=2 SV=1
Length = 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVR 78
+AFLP +I GH+V +SS+ G++ +P Y ++KFAVR
Sbjct: 123 KAFLPHVIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVR 163
>sp|Q566S6|DRS7B_DANRE Dehydrogenase/reductase SDR family member 7B OS=Danio rerio
GN=dhrs7b PE=2 SV=1
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 14 VSYYNNVYAVALFIPIIFICGETLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSS 73
VS V F P+ +A LPSM++R GH+V +SS+ G + +P Y +S
Sbjct: 141 VSVQREVMETNYFGPVALT-----QAILPSMVDRGSGHIVVISSVQGKISIPYRSAYAAS 195
Query: 74 KFAVR 78
K A++
Sbjct: 196 KHAMQ 200
>sp|Q5BL28|DS7CB_DANRE Dehydrogenase/reductase SDR family member 7C-B OS=Danio rerio
GN=dhrs7cb PE=2 SV=1
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 26 FIPIIFICGETLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVR 78
F PI + G FLPS+I R GH++ ++S+ G L +P Y +SK AV+
Sbjct: 160 FGPITLVKG-----FLPSLISRRSGHILLVNSIQGKLAMPFRTTYAASKHAVQ 207
>sp|Q8BLX4|FUCT1_MOUSE GDP-fucose transporter 1 OS=Mus musculus GN=Slc35c1 PE=2 SV=1
Length = 363
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 4 LPYVNDKIWLVSYYNNVYAVALFIPIIFICGETLEAFLPSMIERNHGHVVALSSMCGVLG 63
LP V+ IW +++YNNV A LF+P++ + GE L A L + + H + ++ G+ G
Sbjct: 219 LPAVDHSIWRLTFYNNVNACVLFLPLMIVLGE-LRALL-AFTHLSSAHFWLMMTLGGLFG 276
Query: 64 LP-NVVPYCSSKFAVREGHNI 83
V KF HN+
Sbjct: 277 FAIGYVTGLQIKFTSPLTHNV 297
>sp|P14802|YOXD_BACSU Uncharacterized oxidoreductase YoxD OS=Bacillus subtilis (strain
168) GN=yoxD PE=3 SV=2
Length = 238
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 39 AFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
A LP MIER G ++ +SS G G Y +SKFAV
Sbjct: 124 AVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAV 162
>sp|Q92EK7|Y452_LISIN Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=lin0452 PE=3 SV=1
Length = 248
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVRE 79
+ A LPS I + GH++A SS+ G+ P Y ++K+AVR+
Sbjct: 121 IAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRD 163
>sp|P25145|Y432_LISMO Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo0432
PE=3 SV=2
Length = 248
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 37 LEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVRE 79
+ A LPS I + GH++A SS+ G+ P Y ++K+AVR+
Sbjct: 121 IAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRD 163
>sp|Q56841|HCDS_XANP2 2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus
(strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1
Length = 249
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
+A L M+ER G +V S+ G++G+P + YC++K AV
Sbjct: 118 KAALFGMLERGRGAIVNFGSVAGLVGIPTMAAYCAAKGAV 157
>sp|P29147|BDH_RAT D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Bdh1 PE=1 SV=2
Length = 343
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 36 TLEAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
T ++FLP ++ R G VV +SSM G + P PYC +KF V
Sbjct: 175 TTKSFLP-LLRRAKGRVVNISSMLGRMANPARSPYCITKFGV 215
>sp|O34782|YVRD_BACSU Uncharacterized oxidoreductase YvrD OS=Bacillus subtilis (strain
168) GN=yvrD PE=3 SV=1
Length = 263
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 40 FLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
FLP M+ +N G ++ ++S GV LP ++PY +K A+
Sbjct: 124 FLPKMLAKNSGRILNIASEAGVKPLPTMIPYSMTKTAL 161
>sp|Q9Y140|DHRS7_DROME Dehydrogenase/reductase SDR family protein 7-like OS=Drosophila
melanogaster GN=CG7601 PE=2 SV=1
Length = 326
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAVR 78
+A LPSM++R GH+ +SS+ G +P Y +SK A++
Sbjct: 174 KALLPSMVKRGSGHICFISSVQGKFAIPQRAAYSASKHAMQ 214
>sp|Q02338|BDH_HUMAN D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Homo sapiens
GN=BDH1 PE=1 SV=3
Length = 343
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 38 EAFLPSMIERNHGHVVALSSMCGVLGLPNVVPYCSSKFAV 77
++FLP +I R G VV +SSM G + P PYC +KF V
Sbjct: 177 KSFLP-LIRRAKGRVVNISSMLGRMANPARSPYCITKFGV 215
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.476
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,926,342
Number of Sequences: 539616
Number of extensions: 1512745
Number of successful extensions: 4122
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 3975
Number of HSP's gapped (non-prelim): 177
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)