Your job contains 1 sequence.
>psy10732
MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10732
(58 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q148F0 - symbol:URM1 "Ubiquitin-related modifie... 190 5.4e-15 1
UNIPROTKB|E2QUA4 - symbol:URM1 "Uncharacterized protein" ... 190 5.4e-15 1
UNIPROTKB|A9YUB5 - symbol:URM1 "Ubiquitin-related modifie... 190 5.4e-15 1
RGD|1306599 - symbol:Urm1 "ubiquitin related modifier 1" ... 189 6.9e-15 1
MGI|MGI:1915455 - symbol:Urm1 "ubiquitin related modifier... 187 1.1e-14 1
UNIPROTKB|Q9BTM9 - symbol:URM1 "Ubiquitin-related modifie... 186 1.4e-14 1
UNIPROTKB|F1RR84 - symbol:URM1 "Uncharacterized protein" ... 186 1.4e-14 1
UNIPROTKB|Q5ZJU4 - symbol:URM1 "Ubiquitin-related modifie... 182 3.8e-14 1
ZFIN|ZDB-GENE-091204-300 - symbol:urm1 "ubiquitin related... 173 3.4e-13 1
FB|FBgn0053276 - symbol:CG33276 species:7227 "Drosophila ... 170 7.1e-13 1
TAIR|locus:4010713712 - symbol:AT2G45695 "AT2G45695" spec... 137 2.2e-09 1
TAIR|locus:4515103292 - symbol:AT3G61113 "AT3G61113" spec... 127 2.6e-08 1
DICTYBASE|DDB_G0283737 - symbol:urm1 "ubiquitin-related m... 104 7.0e-06 1
>UNIPROTKB|Q148F0 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9913 "Bos taurus" [GO:0034227 "tRNA thio-modification"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016783
"sulfurtransferase activity" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005737
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783
GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285 eggNOG:COG5131
HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
EMBL:BC118391 IPI:IPI00699527 RefSeq:NP_001069197.1
RefSeq:NP_001178049.1 UniGene:Bt.87900 ProteinModelPortal:Q148F0
SMR:Q148F0 Ensembl:ENSBTAT00000036128 GeneID:515890 GeneID:781062
KEGG:bta:515890 KEGG:bta:781062 CTD:81605
GeneTree:ENSGT00390000005101 HOVERGEN:HBG059837 InParanoid:Q148F0
OrthoDB:EOG4H4658 NextBio:20872042 Uniprot:Q148F0
Length = 101
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ + V+FGGGAELLF VK H + LP E+PW I+ L+ W+K N L ERPELF+QGDS
Sbjct: 5 LSVEVEFGGGAELLFDGVKKHQVTLPGQEEPWDIRSLLVWIKKNLLKERPELFIQGDS 62
>UNIPROTKB|E2QUA4 [details] [associations]
symbol:URM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034227 "tRNA thio-modification"
evidence=IEA] [GO:0016783 "sulfurtransferase activity"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783 GO:GO:0034227
InterPro:IPR016155 SUPFAM:SSF54285 KO:K12161 PANTHER:PTHR14986
OMA:WELMGEL CTD:81605 GeneTree:ENSGT00390000005101
EMBL:AAEX03006856 RefSeq:XP_850726.1 Ensembl:ENSCAFT00000036436
GeneID:608549 KEGG:cfa:608549 NextBio:20894194 Uniprot:E2QUA4
Length = 101
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ + V+FGGGAELLF VK H + LP E+PW I+ L+ W+K N L ERPELF+QGDS
Sbjct: 5 LSVEVEFGGGAELLFDGVKKHQVTLPGQEEPWDIRSLLVWIKKNLLKERPELFIQGDS 62
>UNIPROTKB|A9YUB5 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9925 "Capra hircus" [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0034227 "tRNA thio-modification"
evidence=ISS] UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0002098 GO:GO:0034227 InterPro:IPR016155
SUPFAM:SSF54285 PANTHER:PTHR14986 HOVERGEN:HBG059837 EMBL:EU295697
UniGene:Chi.20340 ProteinModelPortal:A9YUB5 SMR:A9YUB5
Uniprot:A9YUB5
Length = 101
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ + V+FGGGAELLF VK H + LP E+PW I+ L+ W+K N L ERPELF+QGDS
Sbjct: 5 LSVEVEFGGGAELLFDGVKKHQVTLPGQEEPWDIRSLLVWIKKNLLKERPELFIQGDS 62
>RGD|1306599 [details] [associations]
symbol:Urm1 "ubiquitin related modifier 1" species:10116 "Rattus
norvegicus" [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016783
"sulfurtransferase activity" evidence=IEA] [GO:0034227 "tRNA
thio-modification" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 RGD:1306599
GO:GO:0005737 Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098
GO:GO:0016783 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986
OMA:WELMGEL CTD:81605 GeneTree:ENSGT00390000005101
HOVERGEN:HBG059837 OrthoDB:EOG4H4658 EMBL:BC169094 IPI:IPI00372071
RefSeq:NP_001131034.2 UniGene:Rn.6516 STRING:B6ID11
Ensembl:ENSRNOT00000037494 GeneID:311840 KEGG:rno:311840
NextBio:664273 Genevestigator:B6ID11 Uniprot:B6ID11
Length = 101
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 3 ITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ V+FGGGAELLF VK H + LP E+PW I+ L+ W+K N L ERPELF+QGDS
Sbjct: 7 VEVEFGGGAELLFDGVKKHQVTLPGQEEPWDIRNLLVWIKTNLLKERPELFIQGDS 62
>MGI|MGI:1915455 [details] [associations]
symbol:Urm1 "ubiquitin related modifier 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0002098 "tRNA wobble
uridine modification" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0034227 "tRNA
thio-modification" evidence=ISO] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 MGI:MGI:1915455
GO:GO:0005737 Gene3D:3.10.20.30 InterPro:IPR012675 EMBL:CH466542
GO:GO:0002098 GO:GO:0016783 GO:GO:0034227 InterPro:IPR016155
SUPFAM:SSF54285 EMBL:AL928926 eggNOG:COG5131 HOGENOM:HOG000280990
KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL CTD:81605
GeneTree:ENSGT00390000005101 HOVERGEN:HBG059837 OrthoDB:EOG4H4658
ChiTaRS:URM1 EMBL:AK019352 EMBL:AK049227 EMBL:AK049849
EMBL:BC026994 IPI:IPI00457538 RefSeq:NP_080891.1 UniGene:Mm.20273
PDB:1WGK PDB:1XO3 PDBsum:1WGK PDBsum:1XO3 ProteinModelPortal:Q9D2P4
SMR:Q9D2P4 STRING:Q9D2P4 PaxDb:Q9D2P4 PRIDE:Q9D2P4 DNASU:68205
Ensembl:ENSMUST00000091142 GeneID:68205 KEGG:mmu:68205
UCSC:uc008jag.1 InParanoid:A3KGW2 EvolutionaryTrace:Q9D2P4
NextBio:326704 Bgee:Q9D2P4 Genevestigator:Q9D2P4
GermOnline:ENSMUSG00000069020 Uniprot:Q9D2P4
Length = 101
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 3 ITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ V+FGGGAELLF VK H + LP E+PW I+ L+ W+K N L ERPELF+QGDS
Sbjct: 7 VKVEFGGGAELLFDGVKKHQVALPGQEEPWDIRNLLVWIKKNLLKERPELFIQGDS 62
>UNIPROTKB|Q9BTM9 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0002098 "tRNA wobble uridine modification"
evidence=IMP] [GO:0005829 "cytosol" evidence=IC] [GO:0034227 "tRNA
thio-modification" evidence=IMP] [GO:0016783 "sulfurtransferase
activity" evidence=IDA] UniPathway:UPA00988 InterPro:IPR015221
Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005829 EMBL:CH471090
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098 EMBL:AL359091
GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
CTD:81605 HOVERGEN:HBG059837 OrthoDB:EOG4H4658 EMBL:AK001880
EMBL:AK300877 EMBL:BC003581 IPI:IPI00008445 IPI:IPI00910850
RefSeq:NP_001129419.1 RefSeq:NP_001252511.1 RefSeq:NP_112176.1
UniGene:Hs.495229 ProteinModelPortal:Q9BTM9 SMR:Q9BTM9
DIP:DIP-48631N IntAct:Q9BTM9 MINT:MINT-1401016 STRING:Q9BTM9
DMDM:68565265 PRIDE:Q9BTM9 Ensembl:ENST00000372850
Ensembl:ENST00000372853 Ensembl:ENST00000452446 GeneID:81605
KEGG:hsa:81605 UCSC:uc004buv.2 UCSC:uc011may.1
GeneCards:GC09P131133 HGNC:HGNC:28378 MIM:612693 neXtProt:NX_Q9BTM9
PharmGKB:PA162408677 eggNOG:NOG282764 InParanoid:Q9BTM9
PhylomeDB:Q9BTM9 ChiTaRS:URM1 GenomeRNAi:81605 NextBio:71912
ArrayExpress:Q9BTM9 Bgee:Q9BTM9 CleanEx:HS_URM1
Genevestigator:Q9BTM9 GermOnline:ENSG00000167118 Uniprot:Q9BTM9
Length = 101
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ + V+FGGGAELLF +K H + LP E+PW I+ L+ W+K N L ERPELF+QGDS
Sbjct: 5 LSVEVEFGGGAELLFDGIKKHRVTLPGQEEPWDIRNLLIWIKKNLLKERPELFIQGDS 62
>UNIPROTKB|F1RR84 [details] [associations]
symbol:URM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034227 "tRNA thio-modification" evidence=IEA]
[GO:0016783 "sulfurtransferase activity" evidence=IEA] [GO:0002098
"tRNA wobble uridine modification" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] UniPathway:UPA00988 InterPro:IPR015221
Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783 GO:GO:0034227
InterPro:IPR016155 SUPFAM:SSF54285 KO:K12161 PANTHER:PTHR14986
OMA:WELMGEL CTD:81605 GeneTree:ENSGT00390000005101 EMBL:CU234126
RefSeq:NP_001230416.1 UniGene:Ssc.2196 UniGene:Ssc.59342
UniGene:Ssc.94767 Ensembl:ENSSSCT00000006211 GeneID:100154341
KEGG:ssc:100154341 Uniprot:F1RR84
Length = 101
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ + V+FGGGAELLF VK H + LP ++PW ++ L+ W+K N L ERPELF+QGDS
Sbjct: 5 LSVEVEFGGGAELLFDGVKKHQVTLPGQDEPWDVRNLLVWIKKNLLKERPELFIQGDS 62
>UNIPROTKB|Q5ZJU4 [details] [associations]
symbol:URM1 "Ubiquitin-related modifier 1 homolog"
species:9031 "Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016783 "sulfurtransferase activity" evidence=IEA] [GO:0002098
"tRNA wobble uridine modification" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379 GO:GO:0005737
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0002098 GO:GO:0016783
GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285 eggNOG:COG5131
HOGENOM:HOG000280990 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
CTD:81605 GeneTree:ENSGT00390000005101 HOVERGEN:HBG059837
OrthoDB:EOG4H4658 EMBL:AJ720340 IPI:IPI00582291
RefSeq:NP_001007844.1 UniGene:Gga.7515 HSSP:Q9D2P4
ProteinModelPortal:Q5ZJU4 SMR:Q5ZJU4 STRING:Q5ZJU4
Ensembl:ENSGALT00000007972 GeneID:417221 KEGG:gga:417221
InParanoid:Q5ZJU4 NextBio:20820564 Uniprot:Q5ZJU4
Length = 101
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+ + V+FGGGAELLF VK H + LP+ +PW I+ L++W+K N L ERPELF+QG+S
Sbjct: 5 VSLQVEFGGGAELLFDGVKKHQVTLPSQPEPWDIRNLLKWIKQNLLKERPELFMQGES 62
>ZFIN|ZDB-GENE-091204-300 [details] [associations]
symbol:urm1 "ubiquitin related modifier 1"
species:7955 "Danio rerio" [GO:0034227 "tRNA thio-modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] UniPathway:UPA00988
InterPro:IPR015221 Pfam:PF09138 PIRSF:PIRSF037379
ZFIN:ZDB-GENE-091204-300 GO:GO:0005737 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
PANTHER:PTHR14986 GeneTree:ENSGT00390000005101 EMBL:BX323065
IPI:IPI00995913 Ensembl:ENSDART00000142895 ArrayExpress:F2Z4T6
Bgee:F2Z4T6 Uniprot:F2Z4T6
Length = 101
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 5 VQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
++FGGGAELLF VKNH + LP PW +K L+ W++ N L ERPELF+QGD+
Sbjct: 9 LEFGGGAELLFDGVKNHHVTLPDQSNPWDMKQLLAWIRGNMLKERPELFMQGDT 62
>FB|FBgn0053276 [details] [associations]
symbol:CG33276 species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0034227 "tRNA thio-modification" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 EMBL:AE014296 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL
GeneTree:ENSGT00390000005101 HSSP:Q9D2P4 EMBL:BT030919
RefSeq:NP_996018.2 ProteinModelPortal:Q7KU86 SMR:Q7KU86
STRING:Q7KU86 EnsemblMetazoa:FBtr0114530 GeneID:2768949
KEGG:dme:Dmel_CG33276 UCSC:CG33276-RB FlyBase:FBgn0053276
InParanoid:Q7KU86 OrthoDB:EOG44J11M PhylomeDB:Q7KU86
GenomeRNAi:2768949 NextBio:848773 Bgee:Q7KU86 Uniprot:Q7KU86
Length = 101
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
+KI ++F GAELLFG +K +L+L G++ WTI L++W+ N LTERPELF+QGD+
Sbjct: 6 LKIILEFSAGAELLFGNIKRRELNLD-GKQKWTIANLLKWMHANILTERPELFLQGDT 62
>TAIR|locus:4010713712 [details] [associations]
symbol:AT2G45695 "AT2G45695" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0034227 "tRNA thio-modification"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.10.20.30 InterPro:IPR012675
EMBL:AC003680 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
EMBL:DQ487520 EMBL:DQ652667 EMBL:AK220657 IPI:IPI00570394
RefSeq:NP_001078064.1 UniGene:At.47809 ProteinModelPortal:A0MDQ1
SMR:A0MDQ1 PaxDb:A0MDQ1 PRIDE:A0MDQ1 EnsemblPlants:AT2G45695.1
GeneID:5007965 KEGG:ath:AT2G45695 TAIR:At2g45695 eggNOG:COG5131
HOGENOM:HOG000280990 KO:K12161 OMA:EYDTVIE PhylomeDB:A0MDQ1
ProtClustDB:CLSN2696720 Genevestigator:A0MDQ1 PANTHER:PTHR14986
Uniprot:A0MDQ1
Length = 101
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 1 MKITVQFGGGAELLFGKVKNH--DLDLPTG--EKPWTIKGLIEWLKLNKLTERPELFVQG 56
M++T++FGGG ELL K H ++DLP G +T+K L+ W++ N + ERPE+F++G
Sbjct: 1 MQLTLEFGGGLELLCDSEKIHKVNVDLPNGADSDDFTMKHLLSWVRTNLIKERPEMFMKG 60
Query: 57 DS 58
D+
Sbjct: 61 DT 62
>TAIR|locus:4515103292 [details] [associations]
symbol:AT3G61113 "AT3G61113" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IEA] [GO:0034227 "tRNA thio-modification"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL137898 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 HOGENOM:HOG000280990 KO:K12161
ProtClustDB:CLSN2696720 PANTHER:PTHR14986 IPI:IPI00891147
RefSeq:NP_001118872.1 UniGene:At.73553 ProteinModelPortal:B3H7G2
SMR:B3H7G2 STRING:B3H7G2 EnsemblPlants:AT3G61113.1 GeneID:6241165
KEGG:ath:AT3G61113 TAIR:At3g61113 OMA:WELMGEL PhylomeDB:B3H7G2
Genevestigator:B3H7G2 Uniprot:B3H7G2
Length = 99
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 1 MKITVQFGGGAELLFGKVKNH--DLDLPTGEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
M+ T++FGGG ELL VK H +++L T+K L+ W++ N + ERPE+F++GD+
Sbjct: 1 MQFTLEFGGGLELLCDSVKIHKVNINLLNDSDILTMKDLLSWVRTNLIKERPEMFMKGDT 60
>DICTYBASE|DDB_G0283737 [details] [associations]
symbol:urm1 "ubiquitin-related modifier 1"
species:44689 "Dictyostelium discoideum" [GO:0034227 "tRNA
thio-modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
UniPathway:UPA00988 InterPro:IPR015221 Pfam:PF09138
PIRSF:PIRSF037379 dictyBase:DDB_G0283737 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0034227 InterPro:IPR016155 SUPFAM:SSF54285
eggNOG:COG5131 KO:K12161 PANTHER:PTHR14986 OMA:WELMGEL HSSP:Q9D2P4
RefSeq:XP_638993.1 ProteinModelPortal:Q54QN0 STRING:Q54QN0
EnsemblProtists:DDB0185658 GeneID:8624239 KEGG:ddi:DDB_G0283737
ProtClustDB:CLSZ2497189 Uniprot:Q54QN0
Length = 96
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MKITVQFGGGAELLFGKVKNHDLDLPT-GEKPWTIKGLIEWLKLNKLTERPELFVQGDS 58
MK+ ++ GG ELLF K K H+++ E P +K LI +++ N L ER ELFV D+
Sbjct: 1 MKVKIELSGGLELLFDKKKVHEIEFSDKNEIP--LKDLILYMRDNLLKERSELFVVDDT 57
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.141 0.437 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 58 58 0.00091 102 3 11 22 0.41 28
29 0.47 27
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 496 (53 KB)
Total size of DFA: 90 KB (2067 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 6.93u 0.08s 7.01t Elapsed: 00:00:18
Total cpu time: 6.93u 0.08s 7.01t Elapsed: 00:00:19
Start: Thu Aug 15 13:35:56 2013 End: Thu Aug 15 13:36:15 2013