BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10735
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36411|RAB7A_DICDI Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A
PE=1 SV=1
Length = 203
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 62/72 (86%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MAT+ K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKE+MVDDR+VTMQ
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS K+A WCQSK N+PYFETSAKE NVEQAFQTIARNA+ E L P I++
Sbjct: 135 VSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLED--GLVFPIPTNIQVI 192
Query: 134 GEGSRNNGG 142
E G
Sbjct: 193 PEPQPAKSG 201
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEVMVDDR+VTMQ
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 58/75 (77%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QV++K+AQ W SKNN+PYFETSAKE NVEQAFQTIARNAL QE+EVELYNEFP+ +KL
Sbjct: 133 QVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPMKL 192
Query: 133 SGEGSRNNGGDSCAC 147
+SC+C
Sbjct: 193 DKNDRAKTSAESCSC 207
>sp|P09527|RAB7A_RAT Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1
SV=2
Length = 207
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEVMVDDR+VTMQ
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 59/75 (78%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QV++K+AQ WC SKNN+PYFETSAKE NVEQAFQTIARNAL QE+EVELYNEFP+ IKL
Sbjct: 133 QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKL 192
Query: 133 SGEGSRNNGGDSCAC 147
+SC+C
Sbjct: 193 DKNERAKASAESCSC 207
>sp|P51150|RAB7A_MOUSE Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2
Length = 207
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEVMVDDR+VTMQ
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 59/75 (78%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QV++K+AQ WC SKNN+PYFETSAKE NVEQAFQTIARNAL QE+EVELYNEFP+ IKL
Sbjct: 133 QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKL 192
Query: 133 SGEGSRNNGGDSCAC 147
+SC+C
Sbjct: 193 DKNDRAKASAESCSC 207
>sp|P51149|RAB7A_HUMAN Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1
Length = 207
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEVMVDDR+VTMQ
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 59/75 (78%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QV++K+AQ WC SKNN+PYFETSAKE NVEQAFQTIARNAL QE+EVELYNEFP+ IKL
Sbjct: 133 QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKL 192
Query: 133 SGEGSRNNGGDSCAC 147
+SC+C
Sbjct: 193 DKNDRAKASAESCSC 207
>sp|Q5R9Y4|RAB7A_PONAB Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1
Length = 207
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEVMVDDR+VTMQ
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 58/75 (77%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QV++K+AQ WC SKNN+PYFETSAKE NVEQAFQTIARNAL QE+EVELYNEFP IKL
Sbjct: 133 QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPKPIKL 192
Query: 133 SGEGSRNNGGDSCAC 147
+SC+C
Sbjct: 193 DKNDRAKASAESCSC 207
>sp|P18067|RAB7A_CANFA Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1
Length = 207
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEVMVDDR+VTMQ
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 59/75 (78%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QV++K+AQ WC SKNN+PYFETSAKE NVEQAFQTIARNAL QE+EVELYNEFP+ IKL
Sbjct: 133 QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKL 192
Query: 133 SGEGSRNNGGDSCAC 147
+SC+C
Sbjct: 193 DKNDRAKTSAESCSC 207
>sp|Q3T0F5|RAB7A_BOVIN Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1
Length = 207
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R K LLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEVMVDDR+VTMQ
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 57/75 (76%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QV++K+AQ WC SKNN+PYFETSAKE NVEQAFQTI RNAL QE+EVELYNEFP+ IKL
Sbjct: 133 QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQETEVELYNEFPEPIKL 192
Query: 133 SGEGSRNNGGDSCAC 147
+ C+C
Sbjct: 193 DKNDRTKPSAEGCSC 207
>sp|Q9LW76|RAG3C_ARATH Ras-related protein RABG3c OS=Arabidopsis thaliana GN=RABG3C PE=2
SV=1
Length = 206
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 60/72 (83%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA+R + LLKVIILGD+ VGKTSLMNQ+VNRKFSNQYKATIGADFLTKEV +DDRI T+Q
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
V+ KKA+ WC SK N+PYFETSAK+G NV+ AF+ IA+NAL E E E+Y PD I ++
Sbjct: 137 VTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNEPEEEVY--LPDTIDVA 194
Query: 134 GEGSRNNGGDSC 145
G + + G C
Sbjct: 195 GARQQRSTGCEC 206
>sp|Q9XER8|RAB7_GOSHI Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1
Length = 207
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA+R + LLKVIILGD+ VGKTSLMNQYVNRKFSNQYKATIGADFLTKEV DDR+ T+Q
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC SK N+PYFETSAKEG NV+ AF+ IARNAL E E E+Y P+ I ++
Sbjct: 137 VSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNEPEEEIY--LPETIDVA 194
Query: 134 GEGSRNNGGDSCAC 147
G R C C
Sbjct: 195 -SGGRPQRSTGCEC 207
>sp|Q9C820|RAG3D_ARATH Ras-related protein RABG3d OS=Arabidopsis thaliana GN=RABG3D PE=2
SV=1
Length = 206
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 60/72 (83%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M++R + LLKVIILGD+ VGKTSLMNQ+VNRKFSNQYKATIGADFLTKEV +DDRI T+Q
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC SK N+PYFETSAKEG NV+ AF+ I +NA E E E Y PD I ++
Sbjct: 137 VSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNEPEEEPY--LPDTIDVA 194
Query: 134 GEGSRNNGGDSC 145
G + + G C
Sbjct: 195 GGQQQRSTGCEC 206
>sp|Q40787|RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1
Length = 206
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 60/72 (83%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA+R +TLLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC SK N+PYFETSAKEG NVE AFQ I +NAL E E ELY PD + +
Sbjct: 137 VSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNEPEEELY--VPDTVDVV 194
Query: 134 GEGSRNNGGDSCA 146
G G+R C
Sbjct: 195 G-GNRAQRSSGCC 206
>sp|O24461|RAB7_PRUAR Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1
Length = 207
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA+R + LLKVIILGD+ VGKTSLMNQYVNRKFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC SK N+PYFETSAKEG NV+ AFQ IA+NAL E E E+Y PD I ++
Sbjct: 137 VSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNEPEEEIY--LPDTIDVA 194
Query: 134 GEGSRNNGGDSCAC 147
G G R C C
Sbjct: 195 G-GGRQQRSSGCEC 207
>sp|O04157|RAG3B_ARATH Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1
SV=1
Length = 203
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M+TR +TLLKVIILGD+ VGKTSLMNQYVN KFS QYKATIGADF+TKE+ +DDR+VT+Q
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA++WC K N+ YFETSAKE NV+ +F I + ALA E + ++Y + PD +
Sbjct: 137 VSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQDIYFQ-PD----T 191
Query: 134 GEGSRNNGGDSCAC 147
G GG CAC
Sbjct: 192 GSVPEQRGG--CAC 203
>sp|P31022|RAB7_PEA Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1
Length = 206
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R +TLLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC +K N+PYFETSAKEG NVE+AFQTIA++AL E ELY PD I +
Sbjct: 137 VSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSGEEEELY--LPDTIDVG 194
Query: 134 GEGSRNNGGDSC 145
+ G C
Sbjct: 195 NSSQPRSTGCEC 206
>sp|Q9LS94|RAG3F_ARATH Ras-related protein RABG3f OS=Arabidopsis thaliana GN=RABG3F PE=2
SV=1
Length = 206
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R +TLLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC SK N+PYFETSAK G NVE+AFQ IA++AL E ELY PD I +
Sbjct: 137 VSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEEELY--LPDTIDVG 194
Query: 134 GEGSRNNGGDSC 145
+ + G C
Sbjct: 195 TSNQQRSTGCEC 206
>sp|Q9XI98|RAG3E_ARATH Ras-related protein RABG3e OS=Arabidopsis thaliana GN=RABG3E PE=2
SV=1
Length = 206
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M +R +TLLKVIILGD+ VGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DR+ T+Q
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC SK N+PY+ETSAK G NVE AF I NA+ E E+Y PD I +
Sbjct: 137 VSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSGEEEEMY--LPDTIDVG 194
Query: 134 GEGSRNNGGDSC 145
+ + G C
Sbjct: 195 TSNPQRSTGCEC 206
>sp|Q9C2L8|RAB7_NEUCR Probable Ras-related protein Rab7 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=17E5.300 PE=3 SV=1
Length = 205
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M++R K LLKVIILGD+ VGKTSLMNQYVN+KFS YKATIGADFLT+EV+VDDR VTMQ
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 LWDTAGQERFQS 72
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
+S+K+A +CQSK N+PYFETSAKE NVEQAF+ IARNAL QE E +F D I +
Sbjct: 136 ISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQEESEEFSGDFQDPINIH 195
Query: 134 GEGSRNNGGDSCAC 147
E R D CAC
Sbjct: 196 IENDR----DGCAC 205
>sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1
Length = 206
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M+ R +TLLKVI+LGDT VGKTSLMNQYV++KFS QYKATIGADF+TKE+ +DDR+VT+Q
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY 123
VS KKA+ WC SK N+PYFETSAKE NV+ AF IA+ ALA E E ++Y
Sbjct: 137 VSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANEHEQDIY 186
>sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1
Length = 206
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 60/72 (83%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M+ R +TLLKVI+LGD+ VGKTSLMNQYV++KFS QYKATIGADF+TKE+ +DDR+VT+Q
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY 123
VS KKA+ WC +K N+PYFETSAKE NV+ AF IA+ ALA E E ++Y
Sbjct: 137 VSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQDIY 186
>sp|O94655|YPT7_SCHPO GTP-binding protein ypt7 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt7 PE=3 SV=1
Length = 205
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA + K LLKVIILG++ VGKTS+MNQYVNRKFS YKATIGADFLTKEV+VDD++VT+Q
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 LWDTAGQERFQS 72
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KA +CQ++ +PYFETSAKE NV++AF+T+A+ AL ++ +F D I L
Sbjct: 136 VSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAADFTDPIHLD 195
Query: 134 GEGSRNNGGDSCAC 147
E + SC C
Sbjct: 196 MESQKT----SCYC 205
>sp|P93267|RAB7_MESCR Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 207
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 59/72 (81%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA+R + LLK+IILGD+ VGKTSLMNQ+VN+KFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKLS 133
VS KKA+ WC SK N+PYFETSAK+G NVE+AFQ IA+NA+ E E E Y PD I ++
Sbjct: 137 VSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNEPEEETY--LPDTIDMA 194
Query: 134 GEGSRNNGGDSCAC 147
G +R +C C
Sbjct: 195 GS-TRPQSSSACEC 207
>sp|Q95UJ0|RAB7A_PAROT Ras-related protein Rab-7a OS=Paramecium octaurelia GN=Rab7a PE=1
SV=2
Length = 206
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 59/78 (75%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA++ K L K+IILGD+ VGKTSLMNQYVN +F+ QY+AT+GADF+ KEVM+DDR+VT+Q
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 74 VSSKKAQQWCQSKNNMPY 91
+ Q+ QS Y
Sbjct: 61 IWDTAGQERFQSLGGAFY 78
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 67 DRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEF 126
D+ +V KAQQWC+S N+ +FE SAK+ N+EQAFQ IA+ A +QE + E++ F
Sbjct: 128 DKATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDEEIF--F 185
Query: 127 PDQIKLSGEGSRNNGGDSCAC 147
P + L+ + + C
Sbjct: 186 PTTVTLTKQSQKPQAKQGGCC 206
>sp|Q6DUB4|RAB7B_PAROT Ras-related protein Rab-7b OS=Paramecium octaurelia GN=Rab7b PE=1
SV=1
Length = 206
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 59/78 (75%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MA++ K L K+IILGD+ VGKTSLMNQYVN +F+ QY+AT+GADF+ KEVM+DDR+VT+Q
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 74 VSSKKAQQWCQSKNNMPY 91
+ Q+ QS Y
Sbjct: 61 IWDTAGQERFQSLGGAFY 78
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 67 DRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEF 126
D+ +V K+QQWC+S N+ +FE SAK+ N+EQAFQ IA+ A +QE + E++ F
Sbjct: 128 DKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDEEIF--F 185
Query: 127 PDQIKLSGEGSRNNGGDSCAC 147
P + L+ + + C
Sbjct: 186 PTTVTLTKQDPKKQTKQGGCC 206
>sp|Q948K8|RAG3A_ARATH Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2
SV=1
Length = 206
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 60/72 (83%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
MATR +TLLKVI+LGD+ VGKTSLMNQYV++KFS QYKATIGADF+TKE+ + +++VT+Q
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 IWDTAGQERFQS 72
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNE-FPDQIKL 132
VS KKA WC S N+PYFETSAK+ NV++AF TIA+ ALA E E ++Y + PD +
Sbjct: 137 VSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIPDAVT- 195
Query: 133 SGEGSRNNGGDSCAC 147
E GG CAC
Sbjct: 196 --ENEPKGGG--CAC 206
>sp|Q39573|YPTC5_CHLRE GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5
PE=3 SV=1
Length = 206
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 60/78 (76%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M+T+ + LLKVIILGD+ VGKTSLMNQYV +KF+ +YKATIGADFLTKE+ VDD+ VTMQ
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 74 VSSKKAQQWCQSKNNMPY 91
+ Q+ QS + Y
Sbjct: 61 IWDTAGQERFQSLGSAFY 78
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYNEFPDQIKL 132
QVS KKA+ WC SK ++PYFETSAKE NVE AF I RNAL E E EL+ PD + +
Sbjct: 136 QVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEKEEELF--MPDAVDM 193
Query: 133 SGEGSRNNGGDSC 145
+ ++ C
Sbjct: 194 NTTATQRKRAGCC 206
>sp|P36864|YPTV5_VOLCA GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1
Length = 205
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 60/78 (76%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M+T+ + +LK+IILGD+ VGKTSLMNQYV +KF+ +YKATIGADFLTKE+ VDD+ VTMQ
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 74 VSSKKAQQWCQSKNNMPY 91
+ Q+ QS + Y
Sbjct: 61 IWDTAGQERFQSLGSAFY 78
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 65 VDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELYN 124
+D+ V QV+ KKA+ WC SK ++PYFETSAKE NVE AF I RNAL E E EL+
Sbjct: 127 IDEVGVNRQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEKEEELF- 185
Query: 125 EFPDQIKLSGEGSRNNGGDSC 145
PD + ++ ++ G C
Sbjct: 186 -VPDAVDMNTSATQRKRGGCC 205
>sp|P32939|YPT7_YEAST GTP-binding protein YPT7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT7 PE=1 SV=1
Length = 208
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVD-DRIVTM 72
M++R K +LKVIILGD+ VGKTSLM++YVN K+S QYKATIGADFLTKEV VD D++ TM
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 73 QVSSKKAQQWCQS 85
QV Q+ QS
Sbjct: 61 QVWDTAGQERFQS 73
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQ-ESEVELY-NEFPDQIK 131
VS K AQ+ +S ++P F TSAK NV+ AF+ IAR+AL Q +++ E + +++ D I
Sbjct: 137 VSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQADTEAFEDDYNDAIN 196
Query: 132 LSGEGSRNNGGDSCAC 147
+ +G N SC+C
Sbjct: 197 IRLDGENN----SCSC 208
>sp|Q9HDY0|YPT71_SCHPO GTP-binding protein ypt71 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ypt71 PE=3 SV=1
Length = 208
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 58/72 (80%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M+ + + LKV+ILGD+ VGKT LMNQ+VN+KFS +YKATIGADFLTK+V+VDD++VT+Q
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 74 VSSKKAQQWCQS 85
+ Q+ QS
Sbjct: 61 LWDTAGQERFQS 72
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 74 VSSKKAQQWCQSKN--NMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY-NEFPDQI 130
VS +A +C+SK+ NM +FE SAKE NV F+T++R AL ES + + N+F + +
Sbjct: 135 VSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENESSRDDFVNDFSEPL 194
Query: 131 KLSGEGSRNNGGDSCAC 147
LS N SC C
Sbjct: 195 LLSKPL---NNTSSCNC 208
>sp|Q9SJ11|RABG2_ARATH Ras-related protein RABG2 OS=Arabidopsis thaliana GN=RABG2 PE=1
SV=2
Length = 212
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 58/71 (81%)
Query: 15 ATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQV 74
+ +N+TLLKVI+LGD+ VGKTSLMNQYV +KF+ QYKATIGADF+TKE+ +D++ VT+Q+
Sbjct: 3 SLKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQI 62
Query: 75 SSKKAQQWCQS 85
Q+ QS
Sbjct: 63 WDTAGQERFQS 73
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 74 VSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQE 117
VS+K+A +WC SK N+PY ETSAKE N+++AF ++A AL+ E
Sbjct: 138 VSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNE 181
>sp|Q5R4W9|RAB9B_PONAB Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1
Length = 201
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 21 LLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQ 80
LLKVI+LGD VGK+SLMN+YV KF +Q TIG +FL +++ VD R VT+Q+ Q
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 81 Q 81
+
Sbjct: 67 E 67
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVE 121
QV++++AQ WC + PY ETSAK+ NV AF+ R LA E ++E
Sbjct: 132 QVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE 180
>sp|Q9NP90|RAB9B_HUMAN Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1
Length = 201
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 21 LLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQ 80
LLKVI+LGD VGK+SLMN+YV KF +Q TIG +FL +++ VD R VT+Q+ Q
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 81 Q 81
+
Sbjct: 67 E 67
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVE 121
QV++++AQ WC + PY ETSAK+ NV AF+ R LA E ++E
Sbjct: 132 QVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE 180
>sp|Q8BHH2|RAB9B_MOUSE Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1
Length = 201
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 21 LLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQ 80
LLKVI+LGD VGK+SLMN+YV KF +Q TIG +FL +++ VD R VT+Q+ Q
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 81 Q 81
+
Sbjct: 67 E 67
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVE 121
QV++++AQ WC N PY ETSAK+ NV AF+ R LA E ++E
Sbjct: 132 QVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE 180
>sp|P51151|RAB9A_HUMAN Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1
Length = 201
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 20 TLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKA 79
+L KVI+LGD VGK+SLMN+YV KF Q TIG +FL K++ VD VTMQ+
Sbjct: 6 SLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAG 65
Query: 80 QQWCQSKNNMPYFETS 95
Q+ +S P++ S
Sbjct: 66 QERFRSLRT-PFYRGS 80
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 69 IVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQE 117
I QVS+++AQ WC+ + PYFETSAK+ NV AF+ R LA E
Sbjct: 128 ISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176
>sp|P24408|RAB9A_CANFA Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2
Length = 201
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 20 TLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKA 79
+L KVI+LGD VGK+SLMN+YV KF Q TIG +FL K++ VD VTMQ+
Sbjct: 6 SLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAG 65
Query: 80 QQWCQSKNNMPYFETS 95
Q+ +S P++ S
Sbjct: 66 QERFRSLRT-PFYRGS 80
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 69 IVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQE 117
I QVS+++AQ WC+ + PYFETSAK+ NV AF+ R LA E
Sbjct: 128 ISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176
>sp|Q9R0M6|RAB9A_MOUSE Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1
Length = 201
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 20 TLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKA 79
+L K+I+LGD VGK+SLMN+YV KF +Q TIG +FL K++ VD VTMQ+
Sbjct: 6 SLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAG 65
Query: 80 QQWCQSKNNMPYFETS 95
Q+ +S P++ S
Sbjct: 66 QERFRSLRT-PFYRGS 80
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVE 121
QVS+++AQ WC+ + PYFETSAK+ NV AF+ R LA E E
Sbjct: 132 QVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSE 180
>sp|Q99P75|RAB9A_RAT Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=1
SV=2
Length = 201
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 20 TLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKA 79
+L K+I+LGD VGK+SLMN+YV KF +Q TIG +FL K++ VD VTMQ+
Sbjct: 6 SLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAG 65
Query: 80 QQWCQSKNNMPYFETS 95
Q+ +S P++ S
Sbjct: 66 QERFRSLRT-PFYRGS 80
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 73 QVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQE 117
QVS+++AQ WC+ + PYFETSAK+ NV AF+ R LA E
Sbjct: 132 QVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATE 176
>sp|Q54P07|RB32D_DICDI Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D
PE=3 SV=1
Length = 228
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 22 LKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQ 81
LK+I++GD +VGKTS++++ + KF+ +YK+TIGADFL+K +D I +Q+ Q+
Sbjct: 10 LKLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQE 69
Query: 82 --WC 83
WC
Sbjct: 70 KYWC 73
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 70 VTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQ--ESEVELYNEFP 127
+T V + QWC Y+E SAK N++++ + + Q +S+ E +N+ P
Sbjct: 133 LTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIEQDKDSDNEQFNDSP 192
Query: 128 DQ 129
D+
Sbjct: 193 DE 194
>sp|Q8VEA8|RAB7B_MOUSE Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1
Length = 199
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M R K LK+II+G VGKTSL++QYV++ F +Y+ T+GA L+K +++DD + +Q
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 74 VSSKKAQQ 81
+ Q+
Sbjct: 61 IWDTGGQE 68
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 59 LTKEVMVDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQ-E 117
L ++ ++DR +VS + WC+ K+ MPYFE SAK NV QAF+ +A AL + +
Sbjct: 122 LGNKIDLEDR----KVSQEVVHGWCKEKD-MPYFEVSAKNDINVVQAFEVLASRALLRYQ 176
Query: 118 SEVELYNEFPDQIKLS 133
E N D IKLS
Sbjct: 177 GTAE--NHLIDSIKLS 190
>sp|O80501|RAH1B_ARATH Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1
SV=1
Length = 208
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 23 KVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQW 82
K++ LGD SVGKTS++ +++ KF N Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 83 CQS 85
+S
Sbjct: 71 FRS 73
>sp|Q550H6|RB11C_DICDI Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C
PE=1 SV=1
Length = 224
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 21 LLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQ 80
L K++I+GD++VGK++L+N++ +F+ + KATIG DF TK + +D++ +T Q Q
Sbjct: 10 LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQ 69
Query: 81 Q 81
+
Sbjct: 70 E 70
>sp|P17608|RYH1_SCHPO GTP-binding protein ryh1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ryh1 PE=1 SV=1
Length = 201
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 22 LKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQ 81
K++ LG+ SVGKTSL+ +++ +F N Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 82 WCQS 85
+S
Sbjct: 72 RFRS 75
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 39 NQYVN-RKFSNQYKATIGADFLT-----KEVMVDDRIVTMQVSSKKAQQWCQSKNNMPYF 92
N +VN K+ +A G D + K + D R VT + KKA++ + +
Sbjct: 97 NSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKEL-----KIMHM 151
Query: 93 ETSAKEGKNVEQAFQTIAR 111
ETSAK G NV+ F+ IA+
Sbjct: 152 ETSAKAGHNVKLLFRKIAQ 170
>sp|Q9SID8|RAH1D_ARATH Ras-related protein RABH1d OS=Arabidopsis thaliana GN=RABH1D PE=3
SV=1
Length = 207
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%)
Query: 23 KVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQW 82
K++ LGD SVGKTS++ +++ KF Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 83 CQS 85
+S
Sbjct: 71 FRS 73
>sp|P61294|RAB6B_MOUSE Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=1 SV=1
Length = 208
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 22 LKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQ 81
K++ LG+ SVGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
Query: 82 WCQS 85
+S
Sbjct: 74 RFRS 77
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 64 MVDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY 123
+ D R +T++ ++A++ ++ + ETSAK G NV+Q F+ +A E+ E
Sbjct: 130 LADKRQITIEEGEQRAKEL-----SVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKS 184
Query: 124 NEFPDQIKLSG--EGSRNNGGDSC 145
E IKL E + GG SC
Sbjct: 185 KEGMIDIKLDKPQEPPASEGGCSC 208
>sp|Q9NRW1|RAB6B_HUMAN Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1
Length = 208
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 22 LKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQ 81
K++ LG+ SVGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
Query: 82 WCQS 85
+S
Sbjct: 74 RFRS 77
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 64 MVDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY 123
+ D R +T++ ++A++ ++ + ETSAK G NV+Q F+ +A E+ E
Sbjct: 130 LADKRQITIEEGEQRAKEL-----SVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKS 184
Query: 124 NEFPDQIKLSG--EGSRNNGGDSC 145
E IKL E + GG SC
Sbjct: 185 KEGMIDIKLDKPQEPPASEGGCSC 208
>sp|A6QR46|RAB6B_BOVIN Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1
Length = 208
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 22 LKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQ 81
K++ LG+ SVGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
Query: 82 WCQS 85
+S
Sbjct: 74 RFRS 77
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 64 MVDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY 123
+ D R +T++ ++A++ ++ + ETSAK G NV+Q F+ +A E+ E
Sbjct: 130 LADKRQITIEEGEQRAKEL-----SVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKS 184
Query: 124 NEFPDQIKLSG--EGSRNNGGDSC 145
E IKL E + GG SC
Sbjct: 185 KEGMIDIKLDKPQEPPASEGGCSC 208
>sp|Q96AH8|RAB7B_HUMAN Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1
Length = 199
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 14 MATRNKTLLKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQ 73
M R K LK+II+G VGKTSL++QYV++ F +Y+ T+GA L+K +++ D + +Q
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 74 VSSKKAQQ 81
+ Q+
Sbjct: 61 IWDTGGQE 68
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 58 FLTKEVMVDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQE 117
L ++ + DR V +V AQ WC+ K+ +PYFE SAK NV QAF+ +A AL++
Sbjct: 121 LLGNKIDLADRKVPQEV----AQGWCREKD-IPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 118 SEVELYNEFPDQIKLSGEGSRN 139
+ L N + IKLS + SR+
Sbjct: 176 QSI-LENHLTESIKLSPDQSRS 196
>sp|Q9WVB1|RAB6A_RAT Ras-related protein Rab-6A OS=Rattus norvegicus GN=Rab6a PE=2
SV=2
Length = 208
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 22 LKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQ 81
K++ LG+ SVGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
Query: 82 WCQS 85
+S
Sbjct: 74 RFRS 77
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 64 MVDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY 123
+ D R V+++ +KA++ N+ + ETSAK G NV+Q F+ +A ES +
Sbjct: 130 LADKRQVSIEEGERKAKEL-----NVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
Query: 124 NEFPDQIKLSG--EGSRNNGGDSC 145
E IKL E N GG SC
Sbjct: 185 REDMIDIKLEKPQEQPVNEGGCSC 208
>sp|P35279|RAB6A_MOUSE Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4
Length = 208
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 22 LKVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQ 81
K++ LG+ SVGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
Query: 82 WCQS 85
+S
Sbjct: 74 RFRS 77
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 64 MVDDRIVTMQVSSKKAQQWCQSKNNMPYFETSAKEGKNVEQAFQTIARNALAQESEVELY 123
+ D R V+++ +KA++ N+ + ETSAK G NV+Q F+ +A ES +
Sbjct: 130 LADKRQVSIEEGERKAKEL-----NVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
Query: 124 NEFPDQIKLSG--EGSRNNGGDSC 145
E IKL E N GG SC
Sbjct: 185 REDMIDIKLEKPQEQPVNEGGCSC 208
>sp|Q9LFT9|RAH1E_ARATH Ras-related protein RABH1e OS=Arabidopsis thaliana GN=RABH1E PE=2
SV=1
Length = 207
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%)
Query: 23 KVIILGDTSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRIVTMQVSSKKAQQW 82
K++ LGD SVGKTS++ +++ KF Y+ATIG DFL+K + ++DR V +Q+ Q+
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 83 CQS 85
+S
Sbjct: 71 FRS 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.126 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,819,051
Number of Sequences: 539616
Number of extensions: 1700574
Number of successful extensions: 8805
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 7459
Number of HSP's gapped (non-prelim): 1458
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)