Query psy10736
Match_columns 104
No_of_seqs 147 out of 1597
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 17:14:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gw4_A Uncharacterized protein 99.7 2.8E-15 9.7E-20 83.6 13.1 101 3-103 87-188 (203)
2 3ro3_A PINS homolog, G-protein 99.7 6.7E-15 2.3E-19 79.0 13.1 97 4-100 31-127 (164)
3 3ro3_A PINS homolog, G-protein 99.7 8E-15 2.7E-19 78.7 13.1 95 3-97 70-164 (164)
4 3gw4_A Uncharacterized protein 99.7 6.8E-15 2.3E-19 82.1 12.6 98 3-100 47-145 (203)
5 1qqe_A Vesicular transport pro 99.7 7.6E-15 2.6E-19 86.8 13.2 96 3-98 58-154 (292)
6 3u3w_A Transcriptional activat 99.6 1.2E-14 4.2E-19 85.8 12.9 100 3-102 176-277 (293)
7 3ulq_A Response regulator aspa 99.6 3.5E-14 1.2E-18 86.3 13.6 94 4-97 165-259 (383)
8 3q15_A PSP28, response regulat 99.6 3.9E-14 1.3E-18 86.1 13.8 96 4-99 163-259 (378)
9 3ulq_A Response regulator aspa 99.6 3.3E-14 1.1E-18 86.5 13.4 98 3-100 205-302 (383)
10 2ifu_A Gamma-SNAP; membrane fu 99.6 5.5E-14 1.9E-18 83.6 12.6 93 4-97 98-190 (307)
11 2ifu_A Gamma-SNAP; membrane fu 99.6 2.2E-14 7.5E-19 85.3 10.4 96 3-99 57-152 (307)
12 3q15_A PSP28, response regulat 99.6 3.8E-14 1.3E-18 86.2 11.2 96 3-99 203-298 (378)
13 3u3w_A Transcriptional activat 99.6 1.7E-14 6E-19 85.1 9.1 96 5-100 138-234 (293)
14 2qfc_A PLCR protein; TPR, HTH, 99.6 9.1E-14 3.1E-18 82.1 11.3 97 4-100 177-275 (293)
15 3qww_A SET and MYND domain-con 99.5 3.1E-13 1.1E-17 84.1 11.8 91 5-95 321-415 (433)
16 1qqe_A Vesicular transport pro 99.5 4.6E-13 1.6E-17 79.1 11.8 94 3-96 98-192 (292)
17 3sf4_A G-protein-signaling mod 99.5 9.5E-13 3.2E-17 79.7 13.2 96 4-99 249-344 (406)
18 3sf4_A G-protein-signaling mod 99.5 1E-12 3.6E-17 79.6 13.2 96 4-99 169-264 (406)
19 2qfc_A PLCR protein; TPR, HTH, 99.5 1E-13 3.5E-18 81.8 8.1 83 16-98 149-232 (293)
20 3ro2_A PINS homolog, G-protein 99.5 1.4E-12 4.6E-17 76.9 12.7 95 4-98 205-299 (338)
21 3ro2_A PINS homolog, G-protein 99.5 2.2E-12 7.5E-17 76.0 13.1 97 3-99 164-260 (338)
22 4a1s_A PINS, partner of inscut 99.5 9.6E-13 3.3E-17 80.2 11.8 96 5-100 286-381 (411)
23 4a1s_A PINS, partner of inscut 99.5 2.3E-12 8E-17 78.5 12.9 95 4-98 205-299 (411)
24 3n71_A Histone lysine methyltr 99.5 1.4E-12 4.7E-17 82.3 11.8 91 5-95 332-426 (490)
25 3edt_B KLC 2, kinesin light ch 99.5 3.1E-12 1E-16 74.0 11.8 93 3-95 22-118 (283)
26 2hr2_A Hypothetical protein; a 99.4 4.9E-12 1.7E-16 69.0 11.0 76 20-95 55-135 (159)
27 4gcn_A Protein STI-1; structur 99.4 3.2E-12 1.1E-16 67.2 9.6 88 5-92 24-113 (127)
28 3qwp_A SET and MYND domain-con 99.4 8.7E-12 3E-16 77.6 12.9 91 5-95 303-404 (429)
29 3edt_B KLC 2, kinesin light ch 99.4 1.5E-11 5E-16 71.1 12.3 92 4-95 65-160 (283)
30 4gcn_A Protein STI-1; structur 99.4 6.7E-12 2.3E-16 66.0 9.6 73 18-96 4-76 (127)
31 1hz4_A MALT regulatory protein 99.4 3.5E-11 1.2E-15 72.7 12.5 94 4-97 75-170 (373)
32 3nf1_A KLC 1, kinesin light ch 99.3 2.7E-11 9.3E-16 71.0 10.9 92 4-95 49-144 (311)
33 3nf1_A KLC 1, kinesin light ch 99.3 8.2E-11 2.8E-15 69.0 12.2 92 4-95 91-186 (311)
34 4g1t_A Interferon-induced prot 99.3 1.4E-11 4.8E-16 76.3 9.1 85 14-98 43-130 (472)
35 3rkv_A Putative peptidylprolyl 99.3 2.6E-11 8.8E-16 65.8 8.7 71 18-94 59-129 (162)
36 3ma5_A Tetratricopeptide repea 99.3 3.1E-11 1.1E-15 60.9 8.5 73 21-99 6-78 (100)
37 4gco_A Protein STI-1; structur 99.3 1.1E-11 3.7E-16 65.2 6.9 83 5-93 29-112 (126)
38 3k9i_A BH0479 protein; putativ 99.3 2.4E-11 8.3E-16 62.8 7.7 83 5-93 6-92 (117)
39 4ga2_A E3 SUMO-protein ligase 99.3 7.2E-11 2.5E-15 63.6 9.6 84 5-94 13-97 (150)
40 4gco_A Protein STI-1; structur 99.3 7.4E-11 2.5E-15 61.9 8.7 70 18-93 9-78 (126)
41 3gyz_A Chaperone protein IPGC; 99.3 1.3E-11 4.4E-16 66.9 5.8 83 5-93 52-135 (151)
42 1hz4_A MALT regulatory protein 99.3 2.3E-10 8E-15 69.1 11.8 83 16-98 47-129 (373)
43 4b4t_Q 26S proteasome regulato 99.2 3.6E-10 1.2E-14 69.3 9.9 95 4-98 117-211 (434)
44 3upv_A Heat shock protein STI1 99.2 1.9E-10 6.5E-15 59.8 7.4 84 5-94 20-104 (126)
45 2hr2_A Hypothetical protein; a 99.2 1.1E-09 3.7E-14 59.8 9.9 73 21-93 10-88 (159)
46 3gyz_A Chaperone protein IPGC; 99.2 5.6E-10 1.9E-14 60.5 8.7 73 16-94 30-102 (151)
47 2xcb_A PCRH, regulatory protei 99.1 2.1E-10 7.1E-15 61.1 6.9 85 5-95 34-119 (142)
48 2kat_A Uncharacterized protein 99.1 9.3E-10 3.2E-14 56.4 9.0 73 20-98 17-89 (115)
49 3sz7_A HSC70 cochaperone (SGT) 99.1 1.9E-10 6.4E-15 62.5 6.4 87 5-97 27-114 (164)
50 1elr_A TPR2A-domain of HOP; HO 99.1 2.1E-09 7.1E-14 55.5 9.6 88 5-92 20-109 (131)
51 3rkv_A Putative peptidylprolyl 99.1 1.1E-09 3.8E-14 59.3 8.8 75 18-92 7-93 (162)
52 2vgx_A Chaperone SYCD; alterna 99.1 3E-10 1E-14 61.1 6.4 84 5-94 37-121 (148)
53 1na3_A Designed protein CTPR2; 99.1 1.1E-09 3.7E-14 53.6 7.9 69 18-92 5-73 (91)
54 2vgx_A Chaperone SYCD; alterna 99.1 7.8E-10 2.7E-14 59.5 7.1 74 15-94 14-87 (148)
55 1zu2_A Mitochondrial import re 99.1 2.1E-10 7E-15 62.5 4.7 85 4-94 17-123 (158)
56 3n71_A Histone lysine methyltr 99.1 4.5E-09 1.5E-13 66.5 11.1 90 4-93 373-466 (490)
57 3urz_A Uncharacterized protein 99.1 2.2E-09 7.4E-14 60.6 8.7 83 5-93 20-119 (208)
58 3q49_B STIP1 homology and U bo 99.1 1.3E-09 4.6E-14 57.1 7.4 84 5-94 25-109 (137)
59 3vtx_A MAMA; tetratricopeptide 99.0 7.7E-10 2.6E-14 60.8 6.5 67 22-94 107-173 (184)
60 2l6j_A TPR repeat-containing p 99.0 1.1E-09 3.8E-14 55.4 6.7 68 22-95 4-71 (111)
61 3upv_A Heat shock protein STI1 99.0 2.3E-09 7.8E-14 55.7 7.9 67 21-93 3-69 (126)
62 1ihg_A Cyclophilin 40; ppiase 99.0 1.9E-09 6.3E-14 66.0 8.6 71 17-93 268-338 (370)
63 2xev_A YBGF; tetratricopeptide 99.0 5.7E-09 1.9E-13 54.1 9.3 86 5-93 18-107 (129)
64 4gyw_A UDP-N-acetylglucosamine 99.0 1.1E-09 3.9E-14 71.9 7.6 82 5-92 25-107 (723)
65 2dba_A Smooth muscle cell asso 99.0 1.3E-08 4.5E-13 53.6 10.5 84 4-93 43-130 (148)
66 1hxi_A PEX5, peroxisome target 99.0 5.9E-10 2E-14 58.0 4.9 84 5-94 33-117 (121)
67 1p5q_A FKBP52, FK506-binding p 99.0 2.8E-09 9.7E-14 64.3 8.3 69 19-93 193-261 (336)
68 3vtx_A MAMA; tetratricopeptide 99.0 4.2E-09 1.5E-13 57.8 8.2 65 22-92 5-69 (184)
69 3sz7_A HSC70 cochaperone (SGT) 99.0 3.3E-09 1.1E-13 57.5 7.6 71 17-93 6-76 (164)
70 2v5f_A Prolyl 4-hydroxylase su 99.0 1E-08 3.5E-13 52.0 8.9 70 23-92 6-76 (104)
71 4ga2_A E3 SUMO-protein ligase 99.0 1.5E-09 5.2E-14 58.4 5.9 84 5-94 47-132 (150)
72 1hh8_A P67PHOX, NCF-2, neutrop 99.0 4.8E-09 1.6E-13 58.8 8.1 83 4-94 21-103 (213)
73 1xnf_A Lipoprotein NLPI; TPR, 99.0 1.3E-08 4.5E-13 58.7 9.7 82 5-92 21-107 (275)
74 3uq3_A Heat shock protein STI1 99.0 1.2E-08 4.3E-13 58.2 9.5 70 22-91 38-108 (258)
75 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 4.7E-09 1.6E-13 65.7 7.8 69 19-93 314-382 (457)
76 2xcb_A PCRH, regulatory protei 98.9 1.6E-08 5.4E-13 53.7 8.7 72 16-93 12-83 (142)
77 4g1t_A Interferon-induced prot 98.9 4.4E-09 1.5E-13 65.2 7.4 90 4-93 73-169 (472)
78 1hh8_A P67PHOX, NCF-2, neutrop 98.9 1.8E-09 6.3E-14 60.5 5.2 89 5-93 53-152 (213)
79 4i17_A Hypothetical protein; T 98.9 6.4E-09 2.2E-13 59.0 7.4 84 5-94 23-108 (228)
80 4gyw_A UDP-N-acetylglucosamine 98.9 3.6E-09 1.2E-13 69.6 7.0 67 20-92 75-141 (723)
81 4b4t_Q 26S proteasome regulato 98.9 6.5E-09 2.2E-13 63.8 7.4 97 4-100 77-173 (434)
82 3uq3_A Heat shock protein STI1 98.9 1.5E-07 5E-12 53.7 12.4 88 5-92 61-169 (258)
83 2fbn_A 70 kDa peptidylprolyl i 98.9 2.7E-08 9.3E-13 55.4 8.9 66 22-93 88-153 (198)
84 1elr_A TPR2A-domain of HOP; HO 98.9 3.1E-08 1E-12 51.0 8.5 69 21-95 3-71 (131)
85 2lni_A Stress-induced-phosphop 98.9 2.3E-08 7.9E-13 51.7 7.7 84 5-94 32-116 (133)
86 4i17_A Hypothetical protein; T 98.9 6.1E-09 2.1E-13 59.1 5.9 88 5-92 58-147 (228)
87 3q49_B STIP1 homology and U bo 98.9 3.3E-08 1.1E-12 51.7 8.2 67 21-93 8-74 (137)
88 1p5q_A FKBP52, FK506-binding p 98.9 3.6E-08 1.2E-12 59.5 9.2 76 18-93 143-227 (336)
89 2kc7_A BFR218_protein; tetratr 98.8 2.9E-08 1E-12 49.3 7.4 64 26-95 4-68 (99)
90 1a17_A Serine/threonine protei 98.8 1.7E-08 5.9E-13 54.2 6.9 66 22-93 47-112 (166)
91 1hxi_A PEX5, peroxisome target 98.8 3.4E-08 1.2E-12 51.3 7.7 65 24-94 19-83 (121)
92 2vyi_A SGTA protein; chaperone 98.8 2E-08 6.9E-13 51.6 6.9 66 22-93 46-111 (131)
93 2fbn_A 70 kDa peptidylprolyl i 98.8 2.9E-08 9.8E-13 55.3 7.8 75 18-92 34-118 (198)
94 1elw_A TPR1-domain of HOP; HOP 98.8 1.3E-08 4.4E-13 51.5 5.8 83 5-93 20-103 (118)
95 3qky_A Outer membrane assembly 98.8 3.3E-08 1.1E-12 57.2 7.9 88 4-94 30-129 (261)
96 2pl2_A Hypothetical conserved 98.8 1.8E-08 6.2E-13 57.1 6.6 26 65-90 121-146 (217)
97 1ihg_A Cyclophilin 40; ppiase 98.8 7.1E-08 2.4E-12 59.0 9.6 74 19-92 220-303 (370)
98 4eqf_A PEX5-related protein; a 98.8 1.7E-08 5.7E-13 60.8 6.5 69 22-96 247-315 (365)
99 2vyi_A SGTA protein; chaperone 98.8 1.4E-07 4.9E-12 48.4 9.0 71 16-92 6-76 (131)
100 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 1.1E-07 3.6E-12 59.6 9.8 76 18-93 264-348 (457)
101 1wao_1 Serine/threonine protei 98.8 1.7E-08 5.8E-13 63.6 6.2 83 5-93 22-105 (477)
102 3hym_B Cell division cycle pro 98.8 3.4E-08 1.2E-12 58.2 7.2 89 5-93 175-267 (330)
103 2pl2_A Hypothetical conserved 98.8 3.1E-08 1.1E-12 56.1 6.7 83 5-93 21-115 (217)
104 2if4_A ATFKBP42; FKBP-like, al 98.8 7.3E-09 2.5E-13 62.5 4.3 66 23-94 231-296 (338)
105 1elw_A TPR1-domain of HOP; HOP 98.8 1.5E-07 5E-12 47.5 8.4 66 22-93 4-69 (118)
106 1na0_A Designed protein CTPR3; 98.8 9.3E-08 3.2E-12 48.7 7.6 65 22-92 43-107 (125)
107 2c2l_A CHIP, carboxy terminus 98.7 1.9E-08 6.5E-13 59.2 5.3 85 5-95 20-105 (281)
108 4eqf_A PEX5-related protein; a 98.7 3.2E-08 1.1E-12 59.5 6.4 86 5-96 81-167 (365)
109 1na0_A Designed protein CTPR3; 98.7 1.4E-07 4.8E-12 48.0 7.8 67 20-92 7-73 (125)
110 1fch_A Peroxisomal targeting s 98.7 5.6E-08 1.9E-12 58.3 7.0 68 22-95 251-318 (368)
111 1a17_A Serine/threonine protei 98.7 2.6E-07 9E-12 49.4 8.9 69 19-93 10-78 (166)
112 2kck_A TPR repeat; tetratricop 98.7 3.2E-08 1.1E-12 49.6 5.0 82 5-90 22-105 (112)
113 2h6f_A Protein farnesyltransfe 98.7 1.7E-08 5.6E-13 62.1 4.5 64 22-91 131-195 (382)
114 3qky_A Outer membrane assembly 98.7 2.5E-07 8.6E-12 53.5 9.3 90 5-94 68-180 (261)
115 2h6f_A Protein farnesyltransfe 98.7 4.3E-08 1.5E-12 60.3 6.2 83 5-93 148-231 (382)
116 3u4t_A TPR repeat-containing p 98.7 7.5E-08 2.6E-12 55.6 6.8 73 22-94 176-253 (272)
117 3as5_A MAMA; tetratricopeptide 98.7 2.4E-07 8.2E-12 50.2 8.3 66 23-94 111-176 (186)
118 3u4t_A TPR repeat-containing p 98.7 2.7E-08 9.1E-13 57.5 4.7 85 5-92 19-104 (272)
119 1fch_A Peroxisomal targeting s 98.7 7.3E-08 2.5E-12 57.8 6.6 91 5-95 267-363 (368)
120 3ieg_A DNAJ homolog subfamily 98.7 4.2E-07 1.4E-11 54.0 9.7 71 17-93 267-337 (359)
121 3qww_A SET and MYND domain-con 98.7 3.4E-07 1.2E-11 57.2 9.5 63 33-95 309-373 (433)
122 2xev_A YBGF; tetratricopeptide 98.7 2.5E-07 8.6E-12 47.8 7.6 68 24-94 4-71 (129)
123 2pzi_A Probable serine/threoni 98.7 9.8E-08 3.3E-12 62.4 7.2 69 19-93 430-498 (681)
124 4abn_A Tetratricopeptide repea 98.7 8.7E-08 3E-12 60.2 6.7 87 5-94 195-290 (474)
125 2vsy_A XCC0866; transferase, g 98.7 1.8E-07 6.1E-12 59.7 8.2 66 21-92 56-121 (568)
126 2dba_A Smooth muscle cell asso 98.7 5E-07 1.7E-11 47.5 8.8 70 20-92 26-95 (148)
127 3urz_A Uncharacterized protein 98.6 7.3E-07 2.5E-11 50.2 9.8 65 23-93 5-85 (208)
128 2lni_A Stress-induced-phosphop 98.6 8.8E-08 3E-12 49.5 5.6 69 18-92 12-80 (133)
129 2vq2_A PILW, putative fimbrial 98.6 2.9E-07 9.8E-12 51.4 7.9 83 5-93 93-178 (225)
130 2kck_A TPR repeat; tetratricop 98.6 8.2E-08 2.8E-12 48.1 5.1 66 23-94 7-72 (112)
131 3hym_B Cell division cycle pro 98.6 2.1E-08 7.1E-13 59.2 3.1 67 20-92 234-300 (330)
132 2xpi_A Anaphase-promoting comp 98.6 1.9E-07 6.5E-12 59.3 7.4 67 22-94 516-582 (597)
133 2ho1_A Type 4 fimbrial biogene 98.6 3.3E-07 1.1E-11 52.3 7.8 64 20-89 139-202 (252)
134 1xnf_A Lipoprotein NLPI; TPR, 98.6 3.2E-07 1.1E-11 52.9 7.7 83 5-93 59-142 (275)
135 3as5_A MAMA; tetratricopeptide 98.6 3.9E-07 1.3E-11 49.3 7.6 63 23-91 77-139 (186)
136 3cv0_A Peroxisome targeting si 98.6 1E-07 3.5E-12 56.1 5.3 67 22-94 206-272 (327)
137 2yhc_A BAMD, UPF0169 lipoprote 98.6 6.6E-07 2.3E-11 50.8 8.5 71 22-95 4-74 (225)
138 2l6j_A TPR repeat-containing p 98.6 3E-09 1E-13 53.7 -1.1 82 5-86 20-102 (111)
139 1ouv_A Conserved hypothetical 98.6 2.7E-07 9.4E-12 53.5 6.9 60 23-90 39-106 (273)
140 2y4t_A DNAJ homolog subfamily 98.6 8.4E-07 2.9E-11 54.6 9.4 70 17-92 290-359 (450)
141 2ho1_A Type 4 fimbrial biogene 98.6 4.6E-07 1.6E-11 51.8 7.7 62 23-90 72-133 (252)
142 2e2e_A Formate-dependent nitri 98.6 2.1E-07 7.3E-12 50.8 5.9 63 24-92 80-145 (177)
143 1klx_A Cysteine rich protein B 98.6 5.2E-07 1.8E-11 47.9 7.2 63 21-91 56-126 (138)
144 4f3v_A ESX-1 secretion system 98.6 2.5E-06 8.5E-11 50.6 10.5 85 5-92 151-238 (282)
145 2vsy_A XCC0866; transferase, g 98.6 1.7E-07 5.7E-12 59.9 6.0 83 5-93 5-88 (568)
146 2vq2_A PILW, putative fimbrial 98.5 5.2E-07 1.8E-11 50.4 7.3 80 5-90 24-105 (225)
147 4abn_A Tetratricopeptide repea 98.5 1E-07 3.5E-12 59.9 4.8 69 18-92 98-167 (474)
148 2fo7_A Synthetic consensus TPR 98.5 1.1E-06 3.9E-11 45.0 8.0 83 5-93 17-100 (136)
149 3cv0_A Peroxisome targeting si 98.5 3.5E-07 1.2E-11 53.8 6.5 83 5-93 154-237 (327)
150 2c2l_A CHIP, carboxy terminus 98.5 2.9E-07 9.9E-12 54.2 6.1 64 22-91 4-67 (281)
151 2q7f_A YRRB protein; TPR, prot 98.5 6.7E-07 2.3E-11 50.6 7.4 62 23-90 92-153 (243)
152 2q7f_A YRRB protein; TPR, prot 98.5 4.3E-07 1.5E-11 51.4 6.6 28 64-91 195-222 (243)
153 2fo7_A Synthetic consensus TPR 98.5 1E-06 3.5E-11 45.2 7.6 65 22-92 69-133 (136)
154 1w3b_A UDP-N-acetylglucosamine 98.5 3.5E-07 1.2E-11 55.5 6.4 65 21-91 66-130 (388)
155 2yhc_A BAMD, UPF0169 lipoprote 98.5 6.7E-07 2.3E-11 50.8 7.2 87 5-94 20-128 (225)
156 3fp2_A TPR repeat-containing p 98.5 3.2E-07 1.1E-11 57.6 6.1 87 5-97 401-497 (537)
157 2e2e_A Formate-dependent nitri 98.5 1.3E-06 4.5E-11 47.6 7.9 66 22-93 44-112 (177)
158 2gw1_A Mitochondrial precursor 98.5 4.3E-07 1.5E-11 56.5 6.5 82 5-92 22-103 (514)
159 2xpi_A Anaphase-promoting comp 98.5 1.9E-06 6.3E-11 54.8 9.3 70 23-92 476-546 (597)
160 3mkr_A Coatomer subunit epsilo 98.5 7.3E-07 2.5E-11 52.8 6.9 65 22-92 200-265 (291)
161 1ouv_A Conserved hypothetical 98.5 9.5E-07 3.2E-11 51.3 7.0 63 21-91 5-71 (273)
162 3bee_A Putative YFRE protein; 98.4 1.5E-06 5.1E-11 43.2 6.8 65 23-93 7-74 (93)
163 2gw1_A Mitochondrial precursor 98.4 2.3E-07 7.8E-12 57.8 4.4 67 23-95 413-482 (514)
164 3qwp_A SET and MYND domain-con 98.4 1.9E-06 6.6E-11 53.8 8.3 69 27-95 292-362 (429)
165 1w3b_A UDP-N-acetylglucosamine 98.4 7.6E-07 2.6E-11 54.0 6.3 64 22-91 237-300 (388)
166 2pzi_A Probable serine/threoni 98.4 2.2E-07 7.6E-12 60.8 4.1 79 5-90 449-528 (681)
167 2r5s_A Uncharacterized protein 98.4 1.5E-06 5.1E-11 47.5 6.9 66 22-91 108-173 (176)
168 3ieg_A DNAJ homolog subfamily 98.4 2.4E-06 8.3E-11 50.7 8.2 84 4-93 18-102 (359)
169 3rjv_A Putative SEL1 repeat pr 98.4 1.1E-06 3.8E-11 49.6 6.4 82 5-91 69-158 (212)
170 2y4t_A DNAJ homolog subfamily 98.4 2E-06 6.7E-11 52.9 7.9 64 22-91 60-123 (450)
171 3k9i_A BH0479 protein; putativ 98.4 4.4E-07 1.5E-11 46.5 3.9 58 34-94 2-59 (117)
172 2if4_A ATFKBP42; FKBP-like, al 98.4 1.6E-06 5.6E-11 52.3 6.8 75 19-93 176-261 (338)
173 3rjv_A Putative SEL1 repeat pr 98.4 8.4E-06 2.9E-10 46.0 9.2 81 4-91 104-197 (212)
174 3fp2_A TPR repeat-containing p 98.3 1.7E-06 5.7E-11 54.3 6.7 63 22-90 25-87 (537)
175 3txn_A 26S proteasome regulato 98.3 7E-05 2.4E-09 46.4 12.8 98 4-101 81-179 (394)
176 4f3v_A ESX-1 secretion system 98.3 3.3E-06 1.1E-10 50.1 6.5 81 4-89 117-198 (282)
177 1wao_1 Serine/threonine protei 98.3 1.5E-07 5.1E-12 59.3 0.9 67 20-92 4-70 (477)
178 1pc2_A Mitochondria fission pr 98.2 4.1E-05 1.4E-09 41.4 9.3 68 21-92 31-101 (152)
179 2xm6_A Protein corresponding t 98.2 7.7E-06 2.6E-10 51.4 7.3 63 22-92 363-433 (490)
180 3mkr_A Coatomer subunit epsilo 98.2 1.8E-05 6.2E-10 46.8 8.4 31 63-93 201-231 (291)
181 2r5s_A Uncharacterized protein 98.2 1.2E-06 4.2E-11 47.9 3.0 57 26-88 10-66 (176)
182 3qou_A Protein YBBN; thioredox 98.1 2.2E-05 7.5E-10 46.3 7.9 66 22-91 219-284 (287)
183 1klx_A Cysteine rich protein B 98.1 2.1E-05 7.1E-10 41.6 6.7 56 28-91 31-90 (138)
184 3qou_A Protein YBBN; thioredox 98.1 5.7E-06 2E-10 48.8 4.9 64 21-90 116-179 (287)
185 2xm6_A Protein corresponding t 98.0 2.6E-05 8.9E-10 49.0 7.3 60 22-89 75-142 (490)
186 3ly7_A Transcriptional activat 98.0 3.8E-05 1.3E-09 47.2 7.5 68 19-93 274-341 (372)
187 2ond_A Cleavage stimulation fa 98.0 9.4E-06 3.2E-10 48.1 4.5 81 6-91 81-163 (308)
188 3ffl_A Anaphase-promoting comp 98.0 0.00038 1.3E-08 38.1 10.8 70 18-87 59-147 (167)
189 3ma5_A Tetratricopeptide repea 97.9 4.8E-05 1.6E-09 37.8 6.1 56 5-60 23-79 (100)
190 3txn_A 26S proteasome regulato 97.9 0.00032 1.1E-08 43.5 10.7 90 9-98 126-217 (394)
191 3ffl_A Anaphase-promoting comp 97.9 0.00031 1.1E-08 38.5 9.5 78 19-96 17-97 (167)
192 3u64_A Protein TP_0956; tetrat 97.9 9.6E-05 3.3E-09 44.1 8.0 80 10-94 187-272 (301)
193 1na3_A Designed protein CTPR2; 97.9 3.3E-05 1.1E-09 37.1 5.2 66 5-76 25-91 (91)
194 3e4b_A ALGK; tetratricopeptide 97.9 3.6E-05 1.2E-09 48.2 6.3 75 4-89 232-314 (452)
195 1xi4_A Clathrin heavy chain; a 97.8 0.00018 6.1E-09 51.2 8.6 74 4-92 1091-1164(1630)
196 2kc7_A BFR218_protein; tetratr 97.7 6.6E-06 2.2E-10 40.6 0.5 76 5-94 16-93 (99)
197 1zu2_A Mitochondrial import re 97.7 6.1E-05 2.1E-09 41.0 4.2 56 33-94 13-78 (158)
198 2kat_A Uncharacterized protein 97.6 0.00041 1.4E-08 34.9 6.5 55 5-59 35-90 (115)
199 2ond_A Cleavage stimulation fa 97.5 0.0002 6.9E-09 42.4 5.3 68 19-91 47-128 (308)
200 1b89_A Protein (clathrin heavy 97.5 0.00079 2.7E-08 42.5 7.3 77 4-91 137-236 (449)
201 2ooe_A Cleavage stimulation fa 97.4 0.00045 1.5E-08 43.8 5.6 78 7-89 304-383 (530)
202 3e4b_A ALGK; tetratricopeptide 97.3 0.00061 2.1E-08 42.7 5.6 27 24-50 178-207 (452)
203 1pc2_A Mitochondria fission pr 97.3 0.002 6.9E-08 34.8 6.6 47 5-51 51-100 (152)
204 2v5f_A Prolyl 4-hydroxylase su 97.2 0.001 3.6E-08 33.3 4.9 32 20-51 44-75 (104)
205 1xi4_A Clathrin heavy chain; a 97.2 0.006 2.1E-07 43.9 9.6 81 4-88 1120-1221(1630)
206 1ya0_A SMG-7 transcript varian 97.1 0.0026 9E-08 40.7 7.1 64 21-90 151-214 (497)
207 1b89_A Protein (clathrin heavy 97.1 0.00031 1.1E-08 44.3 2.5 52 24-89 124-175 (449)
208 1nzn_A CGI-135 protein, fissio 97.0 0.011 3.8E-07 30.9 8.4 66 22-91 35-103 (126)
209 2ooe_A Cleavage stimulation fa 96.9 0.005 1.7E-07 39.1 7.0 27 64-90 427-453 (530)
210 3mv2_B Coatomer subunit epsilo 96.8 0.0099 3.4E-07 35.8 7.4 65 24-92 102-166 (310)
211 3u64_A Protein TP_0956; tetrat 96.8 0.013 4.4E-07 35.2 7.6 53 37-93 178-235 (301)
212 1dce_A Protein (RAB geranylger 96.8 0.0049 1.7E-07 40.0 6.2 65 22-92 63-139 (567)
213 4b4t_R RPN7, 26S proteasome re 96.7 0.015 5E-07 36.5 7.9 69 21-89 167-235 (429)
214 3mv2_B Coatomer subunit epsilo 96.7 0.03 1E-06 33.8 8.9 86 4-89 115-205 (310)
215 4b4t_R RPN7, 26S proteasome re 96.5 0.0093 3.2E-07 37.4 6.0 76 21-99 130-205 (429)
216 1nzn_A CGI-135 protein, fissio 96.4 0.035 1.2E-06 29.1 7.2 46 6-51 55-103 (126)
217 1y8m_A FIS1; mitochondria, unk 96.3 0.047 1.6E-06 29.2 9.4 67 20-91 37-106 (144)
218 3o48_A Mitochondria fission 1 96.1 0.054 1.9E-06 28.6 8.9 64 23-91 41-107 (134)
219 4b4t_P 26S proteasome regulato 96.1 0.13 4.4E-06 32.5 13.4 83 16-98 171-254 (445)
220 3dra_A Protein farnesyltransfe 95.8 0.03 1E-06 33.6 5.6 85 3-93 47-141 (306)
221 3mkq_A Coatomer beta'-subunit; 95.8 0.23 7.9E-06 33.0 12.3 89 5-97 668-777 (814)
222 4gns_B Protein CSD3, chitin bi 95.6 0.081 2.8E-06 35.8 7.3 60 23-88 338-397 (754)
223 1dce_A Protein (RAB geranylger 95.5 0.028 9.7E-07 36.5 5.0 64 22-91 107-173 (567)
224 2cwy_A Hypothetical protein TT 95.5 0.088 3E-06 26.1 5.7 68 28-97 7-74 (94)
225 3o48_A Mitochondria fission 1 95.4 0.034 1.2E-06 29.4 4.2 46 6-51 60-107 (134)
226 3bee_A Putative YFRE protein; 95.2 0.042 1.4E-06 26.9 4.0 36 19-54 40-75 (93)
227 1y8m_A FIS1; mitochondria, unk 95.1 0.037 1.3E-06 29.6 3.7 46 6-51 59-106 (144)
228 4b4t_P 26S proteasome regulato 95.0 0.37 1.3E-05 30.5 10.0 72 21-92 136-207 (445)
229 3ly7_A Transcriptional activat 94.9 0.36 1.2E-05 30.0 9.8 34 59-92 274-307 (372)
230 4b4t_S RPN3, 26S proteasome re 94.8 0.021 7.2E-07 36.8 2.8 75 16-92 225-300 (523)
231 3dss_A Geranylgeranyl transfer 94.6 0.37 1.3E-05 29.4 7.7 48 38-91 90-139 (331)
232 2ijq_A Hypothetical protein; s 94.5 0.12 4.1E-06 28.2 5.0 69 26-97 36-110 (161)
233 3mkq_B Coatomer subunit alpha; 94.5 0.3 1E-05 27.1 10.0 79 5-87 21-114 (177)
234 3dra_A Protein farnesyltransfe 94.4 0.36 1.2E-05 29.0 7.3 62 24-91 105-175 (306)
235 3spa_A Mtrpol, DNA-directed RN 94.0 0.9 3.1E-05 32.3 9.2 68 21-90 126-193 (1134)
236 4h7y_A Dual specificity protei 94.0 0.27 9.1E-06 26.8 5.5 66 21-93 60-125 (161)
237 2ff4_A Probable regulatory pro 93.9 0.66 2.3E-05 28.8 9.1 67 21-93 170-236 (388)
238 3dss_A Geranylgeranyl transfer 93.7 0.68 2.3E-05 28.2 7.9 64 22-91 108-174 (331)
239 4g26_A Pentatricopeptide repea 93.7 0.82 2.8E-05 29.4 8.3 62 23-89 106-167 (501)
240 3q7a_A Farnesyltransferase alp 93.6 0.18 6.2E-06 31.0 5.0 82 4-91 69-154 (349)
241 2o8p_A 14-3-3 domain containin 93.5 0.6 2.1E-05 27.0 6.9 68 25-92 123-198 (227)
242 2rpa_A Katanin P60 ATPase-cont 93.1 0.24 8.2E-06 23.7 4.0 30 25-54 15-44 (78)
243 3q7a_A Farnesyltransferase alp 92.9 0.87 3E-05 28.0 7.2 64 23-92 55-119 (349)
244 4g26_A Pentatricopeptide repea 92.5 1.3 4.6E-05 28.4 8.5 65 22-91 140-204 (501)
245 2rpa_A Katanin P60 ATPase-cont 92.4 0.45 1.5E-05 22.7 4.5 31 65-95 15-45 (78)
246 3efz_A 14-3-3 protein; 14-3-3, 92.4 1 3.5E-05 26.7 6.9 67 25-91 145-226 (268)
247 2crb_A Nuclear receptor bindin 92.3 0.52 1.8E-05 23.3 6.2 35 18-52 11-45 (97)
248 3re2_A Predicted protein; meni 92.2 1.1 3.8E-05 28.0 6.9 78 16-95 249-329 (472)
249 4gq4_A Menin; tumor suppressor 92.1 1.1 3.7E-05 28.5 6.8 79 16-95 256-336 (489)
250 4a5x_A MITD1, MIT domain-conta 91.8 0.58 2E-05 22.7 5.7 38 17-54 11-48 (86)
251 2crb_A Nuclear receptor bindin 91.7 0.64 2.2E-05 23.0 6.2 36 58-93 11-46 (97)
252 2r17_C Vacuolar protein sortin 91.7 1.3 4.6E-05 26.6 10.9 96 3-98 123-231 (298)
253 4a5x_A MITD1, MIT domain-conta 91.6 0.62 2.1E-05 22.6 5.8 33 62-94 16-48 (86)
254 2w2u_A Hypothetical P60 katani 91.3 0.65 2.2E-05 22.3 5.1 34 21-54 18-51 (83)
255 2w2u_A Hypothetical P60 katani 91.3 0.66 2.3E-05 22.3 5.8 29 66-94 23-51 (83)
256 3u84_A Menin; MLL, JUND, ledgf 91.0 1.6 5.5E-05 27.9 6.8 72 22-95 277-351 (550)
257 2v6y_A AAA family ATPase, P60 90.7 0.77 2.6E-05 22.1 5.3 30 22-51 11-40 (83)
258 2v6y_A AAA family ATPase, P60 89.1 1.1 3.8E-05 21.5 5.4 25 70-94 19-43 (83)
259 2cpt_A SKD1 protein, vacuolar 88.8 1.5 5E-05 22.6 5.5 33 22-54 18-50 (117)
260 3ubw_A 14-3-3E, 14-3-3 protein 88.8 2.4 8.3E-05 25.1 11.9 77 17-93 141-230 (261)
261 2cpt_A SKD1 protein, vacuolar 88.8 1.5 5.1E-05 22.6 5.5 18 74-91 30-47 (117)
262 3iqu_A 14-3-3 protein sigma; s 88.2 2.6 8.8E-05 24.6 12.0 76 17-92 118-206 (236)
263 4e6h_A MRNA 3'-END-processing 88.1 2.1 7.1E-05 28.8 6.2 65 22-92 343-408 (679)
264 2wpv_A GET4, UPF0363 protein Y 87.9 3.1 0.00011 25.2 10.6 91 3-93 114-219 (312)
265 2dl1_A Spartin; SPG20, MIT, st 87.9 1.8 6E-05 22.3 5.4 29 22-50 22-50 (116)
266 3t5x_A PCI domain-containing p 86.9 2.1 7.2E-05 24.1 5.1 32 19-50 11-42 (203)
267 1o9d_A 14-3-3-like protein C; 86.9 3.3 0.00011 24.5 11.9 76 17-92 120-208 (260)
268 1wfd_A Hypothetical protein 15 85.8 2 7E-05 21.0 6.2 34 21-54 14-47 (93)
269 3t5x_A PCI domain-containing p 85.7 3.3 0.00011 23.3 6.7 34 61-94 13-46 (203)
270 2v6x_A Vacuolar protein sortin 85.4 2 6.9E-05 20.5 6.2 35 18-52 9-43 (85)
271 2br9_A 14-3-3E, 14-3-3 protein 85.1 4 0.00014 23.7 12.6 78 17-94 115-205 (234)
272 2v6x_A Vacuolar protein sortin 85.0 2.1 7.2E-05 20.5 6.2 19 73-91 24-42 (85)
273 3t5v_B Nuclear mRNA export pro 84.8 5.9 0.0002 25.4 8.3 73 21-94 175-253 (455)
274 3uzd_A 14-3-3 protein gamma; s 84.7 4.3 0.00015 23.8 12.1 76 19-94 118-206 (248)
275 1wfd_A Hypothetical protein 15 84.0 2.6 8.8E-05 20.7 6.3 27 67-93 20-46 (93)
276 2dl1_A Spartin; SPG20, MIT, st 84.0 3 0.0001 21.5 5.5 15 37-51 18-32 (116)
277 4b4t_O 26S proteasome regulato 83.9 5.9 0.0002 24.7 6.7 69 30-98 84-163 (393)
278 3eab_A Spastin; spastin, MIT, 83.7 2.7 9.1E-05 20.6 4.5 13 76-88 33-45 (89)
279 2npm_A 14-3-3 domain containin 82.7 5.6 0.00019 23.6 11.2 77 17-93 141-229 (260)
280 3kae_A CDC27, possible protein 82.6 4.8 0.00016 22.7 8.2 67 25-91 65-143 (242)
281 1om2_A Protein (mitochondrial 82.1 1.8 6.2E-05 21.4 3.0 25 68-92 26-50 (95)
282 2br9_A 14-3-3E, 14-3-3 protein 81.1 6.2 0.00021 23.0 6.2 51 3-53 151-204 (234)
283 3ax2_A Mitochondrial import re 81.0 0.97 3.3E-05 21.3 1.7 26 67-92 22-47 (73)
284 4e6h_A MRNA 3'-END-processing 80.8 11 0.00036 25.5 8.5 68 24-91 380-463 (679)
285 1ya0_A SMG-7 transcript varian 80.7 2 7E-05 27.8 3.6 37 63-99 153-189 (497)
286 4gq2_M Nucleoporin NUP120; bet 80.3 13 0.00044 26.2 9.6 68 26-93 844-928 (950)
287 3myv_A SUSD superfamily protei 78.4 4.3 0.00015 25.7 4.5 34 60-93 188-221 (454)
288 3mkq_B Coatomer subunit alpha; 78.2 6.8 0.00023 21.7 5.8 45 33-88 16-60 (177)
289 3spa_A Mtrpol, DNA-directed RN 77.9 17 0.0006 26.3 8.0 65 22-91 165-230 (1134)
290 4b4t_O 26S proteasome regulato 77.4 11 0.00036 23.6 10.9 70 22-91 127-198 (393)
291 3kez_A Putative sugar binding 77.3 5 0.00017 25.5 4.6 34 60-93 194-227 (461)
292 3lew_A SUSD-like carbohydrate 77.2 5.9 0.0002 25.5 4.9 32 60-91 201-232 (495)
293 3snx_A SUSD homolog, putative 76.7 5.2 0.00018 25.5 4.5 31 60-90 189-219 (460)
294 4h7y_A Dual specificity protei 76.0 7.6 0.00026 21.2 4.9 54 39-93 36-91 (161)
295 1zbp_A Hypothetical protein VP 73.6 12 0.00041 22.4 5.7 56 32-93 7-62 (273)
296 2wxu_A Phospholipase C; cytoly 68.0 20 0.00067 22.5 6.3 43 59-101 95-137 (370)
297 3efz_A 14-3-3 protein; 14-3-3, 67.8 17 0.00057 21.7 5.8 49 3-51 173-226 (268)
298 3mcx_A SUSD superfamily protei 67.0 12 0.00042 23.8 4.6 32 60-91 200-231 (477)
299 4b4t_S RPN3, 26S proteasome re 66.4 11 0.00038 24.8 4.3 48 5-52 247-300 (523)
300 1olp_A Alpha-toxin; zinc phosp 66.1 22 0.00074 22.3 6.3 43 59-101 95-137 (370)
301 1o9d_A 14-3-3-like protein C; 65.7 18 0.00063 21.4 6.0 49 4-52 157-208 (260)
302 1zb1_A BRO1 protein; AIP1, BRO 65.1 22 0.00077 22.2 7.8 36 61-96 256-291 (392)
303 1qsa_A Protein (soluble lytic 63.8 24 0.00082 23.6 5.6 51 33-89 296-346 (618)
304 3hdx_A SUSD homolog, SUSD supe 63.5 16 0.00055 23.3 4.6 31 61-91 196-226 (478)
305 3i4g_A SUSD-like carbohydrate 63.3 20 0.00068 23.3 5.1 30 61-90 197-226 (528)
306 2uy1_A Cleavage stimulation fa 63.0 25 0.00086 22.5 5.5 15 37-51 335-349 (493)
307 3t5v_B Nuclear mRNA export pro 62.4 28 0.00097 22.4 7.8 37 18-54 216-253 (455)
308 4fhn_B Nucleoporin NUP120; pro 61.6 43 0.0015 24.2 9.1 67 26-92 846-929 (1139)
309 2ynq_A ESSB; membrane protein, 61.0 15 0.00051 20.1 3.6 25 4-28 88-112 (161)
310 3qnk_A Putative lipoprotein; a 60.9 17 0.0006 23.4 4.5 31 60-90 180-210 (517)
311 3kae_A CDC27, possible protein 60.2 17 0.00058 20.6 3.7 33 19-51 111-143 (242)
312 2npm_A 14-3-3 domain containin 59.9 25 0.00084 20.9 6.0 49 4-52 178-228 (260)
313 2wb7_A PT26-6P; extra chromoso 59.7 35 0.0012 22.5 6.6 38 38-75 448-487 (526)
314 3f3f_C Nucleoporin NUP85; stru 59.0 11 0.00037 25.1 3.3 47 44-90 518-564 (570)
315 2oo2_A Hypothetical protein AF 57.9 7.8 0.00027 18.8 2.0 29 60-88 33-61 (86)
316 2ijq_A Hypothetical protein; s 57.2 22 0.00075 19.4 5.1 37 21-57 73-110 (161)
317 2wm9_A Dedicator of cytokinesi 57.1 35 0.0012 21.7 6.5 50 25-74 91-140 (428)
318 2uy1_A Cleavage stimulation fa 56.9 36 0.0012 21.8 5.8 46 40-91 197-242 (493)
319 2wpv_A GET4, UPF0363 protein Y 56.7 31 0.0011 21.0 9.6 78 16-94 27-104 (312)
320 4gq4_A Menin; tumor suppressor 54.6 28 0.00097 22.5 4.5 51 4-56 286-337 (489)
321 2o8p_A 14-3-3 domain containin 53.7 31 0.001 20.1 7.6 49 4-52 147-198 (227)
322 2yin_A DOCK2, dedicator of cyt 53.2 42 0.0014 21.5 8.2 42 32-73 102-144 (436)
323 3iqu_A 14-3-3 protein sigma; s 52.7 32 0.0011 20.1 7.1 49 4-52 155-206 (236)
324 4gns_B Protein CSD3, chitin bi 52.7 55 0.0019 22.7 7.8 58 37-94 300-369 (754)
325 3jq1_A SUSD superfamily protei 51.7 12 0.00042 23.9 2.7 30 61-90 179-208 (481)
326 4gq2_M Nucleoporin NUP120; bet 51.6 13 0.00046 26.1 3.0 25 65-89 843-867 (950)
327 3c3r_A Programmed cell death 6 51.0 42 0.0014 20.9 5.5 34 62-95 275-308 (380)
328 2e2a_A Protein (enzyme IIA); h 50.9 23 0.00079 17.8 5.9 35 20-54 18-52 (105)
329 3uzd_A 14-3-3 protein gamma; s 50.5 37 0.0013 20.0 7.1 50 4-53 153-205 (248)
330 3o10_A Sacsin; all-helical dom 50.0 27 0.00092 18.4 5.0 17 36-52 4-20 (141)
331 1wcr_A PTS system, N, N'-diace 50.0 24 0.00081 17.7 5.9 35 20-54 16-50 (103)
332 2ymb_A MITD1, MIT domain-conta 49.8 3.4 0.00012 24.4 0.0 27 25-51 26-52 (257)
333 3ubw_A 14-3-3E, 14-3-3 protein 49.4 39 0.0013 20.1 7.1 49 4-52 178-229 (261)
334 3ebb_A Phospholipase A2-activa 49.4 41 0.0014 20.3 6.1 54 21-74 211-264 (304)
335 3r9m_A BRO1 domain-containing 48.6 47 0.0016 20.7 9.3 36 60-95 251-286 (376)
336 3myv_A SUSD superfamily protei 48.0 43 0.0015 21.2 4.7 32 21-52 189-220 (454)
337 3mcx_A SUSD superfamily protei 47.0 45 0.0015 21.3 4.7 31 21-51 201-231 (477)
338 4a1g_A Mitotic checkpoint seri 46.9 33 0.0011 18.5 4.8 30 62-91 101-130 (152)
339 3lew_A SUSD-like carbohydrate 46.7 46 0.0016 21.5 4.7 32 20-51 201-232 (495)
340 3l22_A SUSD superfamily protei 46.7 16 0.00053 23.1 2.6 28 62-89 201-228 (441)
341 3kez_A Putative sugar binding 46.5 46 0.0016 21.2 4.7 32 21-52 195-226 (461)
342 3re2_A Predicted protein; meni 46.2 55 0.0019 20.9 4.9 52 4-57 279-331 (472)
343 2awi_A PRGX; repressor, pherom 45.8 47 0.0016 19.9 9.0 76 24-99 193-271 (317)
344 3f3f_C Nucleoporin NUP85; stru 45.5 32 0.0011 23.0 3.8 19 70-88 524-542 (570)
345 2xze_A STAM-binding protein; h 45.3 34 0.0012 18.2 5.2 32 22-53 40-71 (146)
346 3mkq_A Coatomer beta'-subunit; 45.1 67 0.0023 21.5 9.4 18 5-22 697-714 (814)
347 2wvi_A Mitotic checkpoint seri 43.8 39 0.0013 18.5 5.1 30 62-91 96-125 (164)
348 3k1s_A PTS system, cellobiose- 43.7 32 0.0011 17.4 5.9 34 20-53 20-53 (109)
349 3hdx_A SUSD homolog, SUSD supe 43.2 56 0.0019 20.9 4.7 31 21-51 196-226 (478)
350 4aez_C MAD3, mitotic spindle c 42.9 48 0.0016 19.2 5.2 29 63-91 151-179 (223)
351 3u84_A Menin; MLL, JUND, ledgf 42.7 68 0.0023 20.9 4.9 52 4-57 301-353 (550)
352 3l8r_A PTCA, putative PTS syst 41.9 37 0.0013 17.6 5.9 34 20-53 35-68 (120)
353 1wy6_A Hypothetical protein ST 40.3 45 0.0015 18.2 7.6 29 62-90 125-153 (172)
354 3esl_A Checkpoint serine/threo 38.7 55 0.0019 18.6 7.6 30 62-91 115-144 (202)
355 4fx5_A VON willebrand factor t 38.6 62 0.0021 20.8 4.4 32 68-99 388-419 (464)
356 3s0r_A De novo designed helica 37.8 19 0.00064 13.1 2.6 13 39-51 4-16 (30)
357 3snx_A SUSD homolog, putative 36.9 57 0.002 20.8 4.0 30 21-50 190-219 (460)
358 3ihv_A SUSD homolog; NP_813570 36.8 51 0.0017 21.4 3.8 32 59-90 193-232 (535)
359 2cp9_A EF-TS, EF-TSMT, elongat 35.4 29 0.00098 15.8 1.9 15 74-88 34-48 (64)
360 2a9u_A Ubiquitin carboxyl-term 35.3 53 0.0018 17.5 5.7 37 22-58 42-78 (144)
361 3lpz_A GET4 (YOR164C homolog); 34.6 82 0.0028 19.5 9.6 76 19-95 32-107 (336)
362 3otn_A SUSD superfamily protei 33.9 47 0.0016 21.3 3.3 31 60-90 186-225 (482)
363 3rau_A Tyrosine-protein phosph 33.6 86 0.0029 19.4 8.7 36 60-95 250-285 (363)
364 2ff4_A Probable regulatory pro 33.0 67 0.0023 19.9 3.8 33 24-56 207-240 (388)
365 2wm9_A Dedicator of cytokinesi 31.3 1E+02 0.0035 19.6 9.0 31 19-49 8-38 (428)
366 2xs1_A Programmed cell death 6 31.0 1.3E+02 0.0044 20.6 5.9 35 61-95 259-293 (704)
367 1qsa_A Protein (soluble lytic 30.8 1.2E+02 0.004 20.5 4.8 46 5-50 301-347 (618)
368 3r9m_A BRO1 domain-containing 29.8 1E+02 0.0035 19.2 5.9 32 22-53 253-284 (376)
369 2pmr_A Uncharacterized protein 29.4 55 0.0019 15.9 5.6 29 60-88 37-65 (87)
370 3ckc_A SUSD; TPR repeat, carbo 28.1 1E+02 0.0035 19.8 4.1 30 61-90 196-231 (527)
371 1vh6_A Flagellar protein FLIS; 28.0 74 0.0025 16.9 5.8 28 28-55 39-66 (145)
372 3jq0_A SUSD superfamily protei 27.0 96 0.0033 20.0 3.9 31 60-90 181-219 (493)
373 2p58_C Putative type III secre 27.0 70 0.0024 16.3 2.8 45 30-85 48-92 (116)
374 2wxu_A Phospholipase C; cytoly 26.9 1.2E+02 0.0042 19.1 6.1 40 18-57 94-133 (370)
375 1u6l_A Hypothetical protein; s 26.8 49 0.0017 17.1 2.2 15 76-90 13-27 (149)
376 3jys_A SUSD superfamily protei 26.4 1.2E+02 0.0042 19.6 4.3 30 61-90 187-222 (499)
377 1olp_A Alpha-toxin; zinc phosp 25.6 1.3E+02 0.0045 19.0 6.7 42 18-59 94-135 (370)
378 2zan_A Vacuolar protein sortin 24.9 15 0.00052 23.2 0.0 14 35-48 24-37 (444)
379 4fx5_A VON willebrand factor t 22.8 1.6E+02 0.0054 19.0 5.1 33 28-60 388-420 (464)
380 3e6u_A LANC-like protein 1; al 22.1 1.5E+02 0.0052 18.6 4.0 32 61-92 122-153 (411)
381 1tsj_A Conserved hypothetical 20.9 50 0.0017 17.1 1.5 14 76-89 14-27 (139)
382 2r17_C Vacuolar protein sortin 20.2 1.6E+02 0.0054 17.9 10.5 85 10-94 173-270 (298)
383 2uwj_G Type III export protein 20.1 90 0.0031 15.9 2.2 45 30-85 47-91 (115)
No 1
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.69 E-value=2.8e-15 Score=83.62 Aligned_cols=101 Identities=20% Similarity=0.190 Sum_probs=93.0
Q ss_pred CchhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHH
Q psy10736 3 VQPNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 81 (104)
Q Consensus 3 ~~~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 81 (104)
.++.+++.+++..+ ++.....++.++|.++...|++++|+.++++++.+.+..+++...+.++.++|.++...|++++|
T Consensus 87 ~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 166 (203)
T 3gw4_A 87 RCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEA 166 (203)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHH
Confidence 35778888888888 56688999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcchhhccc
Q psy10736 82 IDYHLRHLIIAQQLMDRVGEGM 103 (104)
Q Consensus 82 ~~~~~~a~~~~~~~~~~~~~~~ 103 (104)
+.++++++++.+..+++.+.+.
T Consensus 167 ~~~~~~al~~~~~~~~~~~~~~ 188 (203)
T 3gw4_A 167 QQHWLRARDIFAELEDSEAVNE 188 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999887653
No 2
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.67 E-value=6.7e-15 Score=78.97 Aligned_cols=97 Identities=71% Similarity=1.075 Sum_probs=80.4
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++.+++.+....++....+.++..+|.++...|++++|+.++++++.+.+..+++.....++.++|.++...|++++|+.
T Consensus 31 ~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 110 (164)
T 3ro3_A 31 AHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAID 110 (164)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 56677777777788888888888888888888888888888888888888888887778888888888888888888888
Q ss_pred HHHHHHHHHHHhcchhh
Q psy10736 84 YHLRHLIIAQQLMDRVG 100 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~~~ 100 (104)
++++++++.+..+++..
T Consensus 111 ~~~~a~~~~~~~~~~~~ 127 (164)
T 3ro3_A 111 YHLKHLAIAQELKDRIG 127 (164)
T ss_dssp HHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHccchHh
Confidence 88888888877766543
No 3
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.67 E-value=8e-15 Score=78.67 Aligned_cols=95 Identities=35% Similarity=0.540 Sum_probs=87.5
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
.++++++.+....++++....++.++|.++...|++++|+.++++++.+.+..+++.....++.++|.++...|++++|+
T Consensus 70 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 149 (164)
T 3ro3_A 70 EYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM 149 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHH
Confidence 35778888888899999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHHHhcc
Q psy10736 83 DYHLRHLIIAQQLMD 97 (104)
Q Consensus 83 ~~~~~a~~~~~~~~~ 97 (104)
.++++++++.++.++
T Consensus 150 ~~~~~a~~~~~~~~d 164 (164)
T 3ro3_A 150 HFAEKHLEISREVGD 164 (164)
T ss_dssp HHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999877653
No 4
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.66 E-value=6.8e-15 Score=82.09 Aligned_cols=98 Identities=23% Similarity=0.250 Sum_probs=90.1
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHhCChhHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG-DRAVEAQACYSLGNTYTLLRDYPTA 81 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A 81 (104)
.++++++.+++..++.+....++.++|.++...|++++|+.++++++.+++..+ ++...+.++.++|.++...|++++|
T Consensus 47 ~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 126 (203)
T 3gw4_A 47 ASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGA 126 (203)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 357788888899999999999999999999999999999999999999999988 5657889999999999999999999
Q ss_pred HHHHHHHHHHHHHhcchhh
Q psy10736 82 IDYHLRHLIIAQQLMDRVG 100 (104)
Q Consensus 82 ~~~~~~a~~~~~~~~~~~~ 100 (104)
+.++++++++.+..+++..
T Consensus 127 ~~~~~~al~~~~~~~~~~~ 145 (203)
T 3gw4_A 127 RQEYEKSLVYAQQADDQVA 145 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhccchHH
Confidence 9999999999988877654
No 5
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.66 E-value=7.6e-15 Score=86.79 Aligned_cols=96 Identities=14% Similarity=0.015 Sum_probs=88.8
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-CChhHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL-RDYPTA 81 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A 81 (104)
.+|.+++.+....++++..+.++.++|.++...|++++|+.++++++.+....+++...+.++.++|.+|... |++++|
T Consensus 58 ~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A 137 (292)
T 1qqe_A 58 DSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKA 137 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 3577888888888999999999999999999999999999999999999999999988899999999999996 999999
Q ss_pred HHHHHHHHHHHHHhcch
Q psy10736 82 IDYHLRHLIIAQQLMDR 98 (104)
Q Consensus 82 ~~~~~~a~~~~~~~~~~ 98 (104)
+.+|++++++.+..+++
T Consensus 138 ~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 138 IDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhCCCh
Confidence 99999999998876544
No 6
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.64 E-value=1.2e-14 Score=85.79 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=90.1
Q ss_pred CchhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC-hhH
Q psy10736 3 VQPNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRD-YPT 80 (104)
Q Consensus 3 ~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~ 80 (104)
.++++++...+.. ++.+....++.++|.++...|++++|+.++++++++.+..++....+.++.++|.++...|+ +++
T Consensus 176 ~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~ 255 (293)
T 3u3w_A 176 DLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 3567777777777 78889999999999999999999999999999999999998888889999999999999995 699
Q ss_pred HHHHHHHHHHHHHHhcchhhcc
Q psy10736 81 AIDYHLRHLIIAQQLMDRVGEG 102 (104)
Q Consensus 81 A~~~~~~a~~~~~~~~~~~~~~ 102 (104)
|+.++++++.+++..+++....
T Consensus 256 A~~~~~~Al~i~~~~~~~~~~~ 277 (293)
T 3u3w_A 256 IEDAYKKASFFFDILEMHAYKE 277 (293)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999998876543
No 7
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.62 E-value=3.5e-14 Score=86.34 Aligned_cols=94 Identities=16% Similarity=0.249 Sum_probs=68.4
Q ss_pred chhHHHHHHHHhCC-HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 4 QPNDRLKIAREFGD-KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 4 ~~~~a~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
++.+|++++...++ .+..+.++.++|.++...|++++|+.++++++++.++.+++...+.++.++|.+|...|++++|+
T Consensus 165 ~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~ 244 (383)
T 3ulq_A 165 YARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAI 244 (383)
T ss_dssp HHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 45666666666665 66677777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHhcc
Q psy10736 83 DYHLRHLIIAQQLMD 97 (104)
Q Consensus 83 ~~~~~a~~~~~~~~~ 97 (104)
.++++++++.+..++
T Consensus 245 ~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 245 PYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhcc
Confidence 777777777766655
No 8
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.62 E-value=3.9e-14 Score=86.09 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=79.2
Q ss_pred chhHHHHHHHHhCC-HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 4 QPNDRLKIAREFGD-KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 4 ~~~~a~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
++.+++++....++ .+..+.++.++|.++...|++++|++++++++++.++.+++...+.++.++|.+|...|++++|+
T Consensus 163 ~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~ 242 (378)
T 3q15_A 163 HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV 242 (378)
T ss_dssp HHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 46677777777665 66788888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHhcchh
Q psy10736 83 DYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 83 ~~~~~a~~~~~~~~~~~ 99 (104)
.++++++++.+..+++.
T Consensus 243 ~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 243 EHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhhCChh
Confidence 88888888887766554
No 9
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.62 E-value=3.3e-14 Score=86.46 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=90.3
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
.++++++++....++.+..+.++.++|.++...|++++|+.++++++.+.+..++.+....++.++|.++...|++++|+
T Consensus 205 ~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 284 (383)
T 3ulq_A 205 SHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAH 284 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHH
Confidence 45788899999999999999999999999999999999999999999999999885566899999999999999999999
Q ss_pred HHHHHHHHHHHHhcchhh
Q psy10736 83 DYHLRHLIIAQQLMDRVG 100 (104)
Q Consensus 83 ~~~~~a~~~~~~~~~~~~ 100 (104)
.++++++++.+..+++..
T Consensus 285 ~~~~~al~~~~~~~~~~~ 302 (383)
T 3ulq_A 285 EYHSKGMAYSQKAGDVIY 302 (383)
T ss_dssp HHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHcCCHHH
Confidence 999999999988877654
No 10
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.60 E-value=5.5e-14 Score=83.61 Aligned_cols=93 Identities=9% Similarity=-0.013 Sum_probs=67.8
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++++++.+....++....+.++.++|.++.. |++++|+.++++++++.+..+++.....++.++|.++...|++++|+.
T Consensus 98 ~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 176 (307)
T 2ifu_A 98 YIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAA 176 (307)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4566666666677777777777777777776 777777777777777777776666666777777777777777777777
Q ss_pred HHHHHHHHHHHhcc
Q psy10736 84 YHLRHLIIAQQLMD 97 (104)
Q Consensus 84 ~~~~a~~~~~~~~~ 97 (104)
+|++++.+....+.
T Consensus 177 ~~~~al~~~~~~~~ 190 (307)
T 2ifu_A 177 SLQKEKSMYKEMEN 190 (307)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 77777777666544
No 11
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.59 E-value=2.2e-14 Score=85.35 Aligned_cols=96 Identities=11% Similarity=-0.032 Sum_probs=88.6
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
.++.+++.+....++....+.++.++|.++...|++++|+.++++++.+.+..+++...+.++.++|.+|.. |++++|+
T Consensus 57 ~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~ 135 (307)
T 2ifu_A 57 DAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAV 135 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHH
Confidence 357788888889999999999999999999999999999999999999999999998889999999999998 9999999
Q ss_pred HHHHHHHHHHHHhcchh
Q psy10736 83 DYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 83 ~~~~~a~~~~~~~~~~~ 99 (104)
.+|++++++.+..+++.
T Consensus 136 ~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 136 HLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhCCChh
Confidence 99999999998876543
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.59 E-value=3.8e-14 Score=86.16 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=88.7
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
.++++++++++..++....+.++.++|.++...|++++|+.++++++.+.+..+++.. ..++.++|.++...|++++|+
T Consensus 203 ~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~ 281 (378)
T 3q15_A 203 PHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAF 281 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHH
Confidence 4678899999999999999999999999999999999999999999999999888877 899999999999999999999
Q ss_pred HHHHHHHHHHHHhcchh
Q psy10736 83 DYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 83 ~~~~~a~~~~~~~~~~~ 99 (104)
.++++++++.+..+++.
T Consensus 282 ~~~~~al~~~~~~~~~~ 298 (378)
T 3q15_A 282 QFIEEGLDHITARSHKF 298 (378)
T ss_dssp HHHHHHHHHCCTTCCSC
T ss_pred HHHHHHHHHHHHcCCHH
Confidence 99999999987766653
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.58 E-value=1.7e-14 Score=85.13 Aligned_cols=96 Identities=10% Similarity=0.044 Sum_probs=81.2
Q ss_pred hhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL-GDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++++.+....++....+.++.++|.+|...|++++|+.++++++..++.. ++....+.++.++|.+|...|++++|+.
T Consensus 138 ~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~ 217 (293)
T 3u3w_A 138 LKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLY 217 (293)
T ss_dssp HHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 334444333345666678899999999999999999999999999999887 6777888899999999999999999999
Q ss_pred HHHHHHHHHHHhcchhh
Q psy10736 84 YHLRHLIIAQQLMDRVG 100 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~~~ 100 (104)
++++++++.+..++...
T Consensus 218 ~~~~al~~~~~~~~~~~ 234 (293)
T 3u3w_A 218 QVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHTTBCTT
T ss_pred HHHHHHHHHHHcCcHHH
Confidence 99999999988766543
No 14
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.57 E-value=9.1e-14 Score=82.06 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=83.9
Q ss_pred chhHHHHHHHHhCCHHH-HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHH-
Q psy10736 4 QPNDRLKIAREFGDKAA-ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA- 81 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A- 81 (104)
++++++.+.+..++.+. ...+++++|.++...|++++|+.++++++.+....++....+.++.++|.+|...|++++|
T Consensus 177 ~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai 256 (293)
T 2qfc_A 177 LFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEI 256 (293)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 56777777776665443 3489999999999999999999999999999988777777789999999999999999999
Q ss_pred HHHHHHHHHHHHHhcchhh
Q psy10736 82 IDYHLRHLIIAQQLMDRVG 100 (104)
Q Consensus 82 ~~~~~~a~~~~~~~~~~~~ 100 (104)
..++++++.+++..+++..
T Consensus 257 ~~~~~~Al~~~~~~~~~~~ 275 (293)
T 2qfc_A 257 EDAYKKASFFFDILEMHAY 275 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCcHhh
Confidence 8889999999999887643
No 15
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.53 E-value=3.1e-13 Score=84.07 Aligned_cols=91 Identities=8% Similarity=-0.019 Sum_probs=78.2
Q ss_pred hhHHHHHHHHh--CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCChhH
Q psy10736 5 PNDRLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL--GDRAVEAQACYSLGNTYTLLRDYPT 80 (104)
Q Consensus 5 ~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~ 80 (104)
+++++++.+.. .+++..+.++.++|.+|..+|++++|+.++++++++.++. .+.+..+..++++|.+|..+|++++
T Consensus 321 ~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~e 400 (433)
T 3qww_A 321 CELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAA 400 (433)
T ss_dssp HHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHH
Confidence 44444444332 4678899999999999999999999999999999998875 3567789999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q psy10736 81 AIDYHLRHLIIAQQL 95 (104)
Q Consensus 81 A~~~~~~a~~~~~~~ 95 (104)
|+.++++|+++.+..
T Consensus 401 A~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 401 GEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998865
No 16
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.52 E-value=4.6e-13 Score=79.13 Aligned_cols=94 Identities=13% Similarity=0.011 Sum_probs=85.2
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHh-ccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFL-GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 81 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 81 (104)
.++++++.+....++....+.++.++|.++... |++++|+.+|++++++.+..+++.....++.++|.++...|++++|
T Consensus 98 ~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 177 (292)
T 1qqe_A 98 DSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEA 177 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHH
Confidence 357888999999999999999999999999996 9999999999999999998888777788999999999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q psy10736 82 IDYHLRHLIIAQQLM 96 (104)
Q Consensus 82 ~~~~~~a~~~~~~~~ 96 (104)
+.+|++++++....+
T Consensus 178 ~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 178 SDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999998765443
No 17
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.52 E-value=9.5e-13 Score=79.73 Aligned_cols=96 Identities=34% Similarity=0.552 Sum_probs=64.9
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++++++.+....++......++..+|.++...|++++|+.++++++.+....+++.....++..+|.++...|++++|+.
T Consensus 249 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 328 (406)
T 3sf4_A 249 YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMH 328 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 34555666666666666666777777777777777777777777777766666666666667777777777777777777
Q ss_pred HHHHHHHHHHHhcchh
Q psy10736 84 YHLRHLIIAQQLMDRV 99 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~~ 99 (104)
++++++++.+..+++.
T Consensus 329 ~~~~al~~~~~~~~~~ 344 (406)
T 3sf4_A 329 FAEKHLEISREVGDKS 344 (406)
T ss_dssp HHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhcCCc
Confidence 7777777766665443
No 18
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.52 E-value=1e-12 Score=79.55 Aligned_cols=96 Identities=38% Similarity=0.651 Sum_probs=69.9
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++.+++.+....++.+....++.++|.++...|++++|+.++++++.+....+++...+.++.++|.++...|++++|+.
T Consensus 169 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 248 (406)
T 3sf4_A 169 FYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASE 248 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 35556666666677777777777777777777777777777777777777777777667777777777777777777777
Q ss_pred HHHHHHHHHHHhcchh
Q psy10736 84 YHLRHLIIAQQLMDRV 99 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~~ 99 (104)
++++++.+.+..+++.
T Consensus 249 ~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 249 YYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCcCch
Confidence 7777777776665543
No 19
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.51 E-value=1e-13 Score=81.85 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAV-EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.+......++.++|.+|...|++++|+.++++++++.+..++... ...++.++|.+|...|++++|+.++++++++.+.
T Consensus 149 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 149 IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 556667889999999999999999999999999999888765443 3489999999999999999999999999999876
Q ss_pred hcch
Q psy10736 95 LMDR 98 (104)
Q Consensus 95 ~~~~ 98 (104)
.++.
T Consensus 229 ~~~~ 232 (293)
T 2qfc_A 229 INSM 232 (293)
T ss_dssp TTBC
T ss_pred cCcH
Confidence 5544
No 20
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.50 E-value=1.4e-12 Score=76.93 Aligned_cols=95 Identities=73% Similarity=1.089 Sum_probs=68.1
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++++++.+....++......++.++|.++...|++++|+.++++++.+....+++.....++..+|.++...|++++|+.
T Consensus 205 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 284 (338)
T 3ro2_A 205 AHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAID 284 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 56667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHhcch
Q psy10736 84 YHLRHLIIAQQLMDR 98 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~ 98 (104)
++++++++.+..+++
T Consensus 285 ~~~~a~~~~~~~~~~ 299 (338)
T 3ro2_A 285 YHLKHLAIAQELKDR 299 (338)
T ss_dssp HHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHhcCCc
Confidence 777777776666554
No 21
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.49 E-value=2.2e-12 Score=76.03 Aligned_cols=97 Identities=37% Similarity=0.638 Sum_probs=73.3
Q ss_pred CchhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 3 VQPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
.++++++.+....++.+....++.++|.++...|++++|+.++++++.+.+..+++...+.++.++|.++...|++++|+
T Consensus 164 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 243 (338)
T 3ro2_A 164 DLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETAS 243 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 35677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHhcchh
Q psy10736 83 DYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 83 ~~~~~a~~~~~~~~~~~ 99 (104)
.++++++++....+++.
T Consensus 244 ~~~~~al~~~~~~~~~~ 260 (338)
T 3ro2_A 244 EYYKKTLLLARQLKDRA 260 (338)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhhcchh
Confidence 77777777777665544
No 22
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.49 E-value=9.6e-13 Score=80.20 Aligned_cols=96 Identities=34% Similarity=0.519 Sum_probs=59.1
Q ss_pred hhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHH
Q psy10736 5 PNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDY 84 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 84 (104)
+++++.+....++......++..+|.++...|++++|+.++++++.+....++......++..+|.++...|++++|..+
T Consensus 286 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 365 (411)
T 4a1s_A 286 YKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKY 365 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 44555555555555555666666666666666666666666666666666665555566666666666666666666666
Q ss_pred HHHHHHHHHHhcchhh
Q psy10736 85 HLRHLIIAQQLMDRVG 100 (104)
Q Consensus 85 ~~~a~~~~~~~~~~~~ 100 (104)
+++++++.+..+++..
T Consensus 366 ~~~al~~~~~~~~~~~ 381 (411)
T 4a1s_A 366 AEQHLQLAXXXXXXXX 381 (411)
T ss_dssp HHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHhhcccchh
Confidence 6666666665555543
No 23
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.48 E-value=2.3e-12 Score=78.50 Aligned_cols=95 Identities=39% Similarity=0.598 Sum_probs=68.5
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++.+++.+....++.+....++.++|.++...|++++|+.++++++.+....++......++.++|.++...|++++|+.
T Consensus 205 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 284 (411)
T 4a1s_A 205 FYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAE 284 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 34555566666667777777777777777777777777777777777777777766667777777777777777777777
Q ss_pred HHHHHHHHHHHhcch
Q psy10736 84 YHLRHLIIAQQLMDR 98 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~ 98 (104)
++++++.+....+++
T Consensus 285 ~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 285 HYKRTLALAVELGER 299 (411)
T ss_dssp HHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCH
Confidence 777777777665444
No 24
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.48 E-value=1.4e-12 Score=82.27 Aligned_cols=91 Identities=15% Similarity=0.002 Sum_probs=77.8
Q ss_pred hhHHHHHHHHh--CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCChhH
Q psy10736 5 PNDRLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL--GDRAVEAQACYSLGNTYTLLRDYPT 80 (104)
Q Consensus 5 ~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~ 80 (104)
+++++++.+.. .+++..+.++.++|.+|..+|++++|+.++++++++.++. .+.+..+..++++|.+|..+|++++
T Consensus 332 ~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~e 411 (490)
T 3n71_A 332 CRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEV 411 (490)
T ss_dssp HHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHH
Confidence 34444444332 3678899999999999999999999999999999998875 3467789999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q psy10736 81 AIDYHLRHLIIAQQL 95 (104)
Q Consensus 81 A~~~~~~a~~~~~~~ 95 (104)
|+.++++|+++.+..
T Consensus 412 A~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 412 GHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998865
No 25
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.46 E-value=3.1e-12 Score=74.01 Aligned_cols=93 Identities=16% Similarity=0.093 Sum_probs=83.4
Q ss_pred CchhHHHHHHHHhC--CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCCh
Q psy10736 3 VQPNDRLKIAREFG--DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL--GDRAVEAQACYSLGNTYTLLRDY 78 (104)
Q Consensus 3 ~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~ 78 (104)
.++++++++++... +.+....++..+|.++...|++++|+.++++++.+.++. ++.+....++.++|.++...|++
T Consensus 22 ~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 101 (283)
T 3edt_B 22 PLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKY 101 (283)
T ss_dssp HHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccH
Confidence 46788888887664 557889999999999999999999999999999999887 66677889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHh
Q psy10736 79 PTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 79 ~~A~~~~~~a~~~~~~~ 95 (104)
++|+.++++++++.++.
T Consensus 102 ~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 102 KEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 26
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.44 E-value=4.9e-12 Score=68.96 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=64.4
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC-hHHHHHHH----HHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD-RAVEAQAC----YSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~----~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
....++.++|.++..+|++++|+..++++++++.+.+. .+....++ +++|.++..+|++++|+..|++++++...
T Consensus 55 ~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 55 FDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 45669999999999999999999999999998665543 22334566 99999999999999999999999998765
Q ss_pred h
Q psy10736 95 L 95 (104)
Q Consensus 95 ~ 95 (104)
.
T Consensus 135 d 135 (159)
T 2hr2_A 135 R 135 (159)
T ss_dssp C
T ss_pred c
Confidence 3
No 27
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.43 E-value=3.2e-12 Score=67.21 Aligned_cols=88 Identities=11% Similarity=0.070 Sum_probs=70.2
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG-DRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
|++|+..+++. ...|....++.++|.++...|++++|+..+++++++..... .....+.++.++|.++...|++++|+
T Consensus 24 ~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~ 103 (127)
T 4gcn_A 24 FEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAV 103 (127)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 45566555432 11233466899999999999999999999999999987764 44556789999999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 83 DYHLRHLIIA 92 (104)
Q Consensus 83 ~~~~~a~~~~ 92 (104)
++|++++...
T Consensus 104 ~~~~kal~~~ 113 (127)
T 4gcn_A 104 QWFHRSLSEF 113 (127)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhhC
Confidence 9999998754
No 28
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.43 E-value=8.7e-12 Score=77.56 Aligned_cols=91 Identities=14% Similarity=0.057 Sum_probs=78.9
Q ss_pred hhHHHHHHHHh---------CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHH
Q psy10736 5 PNDRLKIAREF---------GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL--GDRAVEAQACYSLGNTYT 73 (104)
Q Consensus 5 ~~~a~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~ 73 (104)
+++|+..+++. .+++..+.++.+++.+|..+|++++|+.++++++++.++. .+.+..+..++++|.+|.
T Consensus 303 ~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~ 382 (429)
T 3qwp_A 303 WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQL 382 (429)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHH
Confidence 45566555433 3568899999999999999999999999999999998875 456778999999999999
Q ss_pred HhCChhHHHHHHHHHHHHHHHh
Q psy10736 74 LLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 74 ~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
.+|++++|+.++++|+++.+..
T Consensus 383 ~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 383 HQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998865
No 29
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.41 E-value=1.5e-11 Score=71.15 Aligned_cols=92 Identities=22% Similarity=0.080 Sum_probs=80.0
Q ss_pred chhHHHHHHHHh--CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHhCChh
Q psy10736 4 QPNDRLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG--DRAVEAQACYSLGNTYTLLRDYP 79 (104)
Q Consensus 4 ~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~ 79 (104)
++++++.+.+.. ++.+....++.++|.++...|++++|+.++.+++.+.++.. +.+....++.++|.++...|+++
T Consensus 65 ~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 144 (283)
T 3edt_B 65 LLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAE 144 (283)
T ss_dssp HHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHH
Confidence 456667766666 67788899999999999999999999999999999988763 33567889999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy10736 80 TAIDYHLRHLIIAQQL 95 (104)
Q Consensus 80 ~A~~~~~~a~~~~~~~ 95 (104)
+|+.++++++++.+..
T Consensus 145 ~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 145 EVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999997665
No 30
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.40 E-value=6.7e-12 Score=65.99 Aligned_cols=73 Identities=12% Similarity=0.246 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhc
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLM 96 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 96 (104)
.+..+.++.++|+.+...|++++|+.+|++++++.. ....++.++|.+|..+|++++|+..+++++++.+...
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p------~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDP------SNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 345677899999999999999999999999998721 2256889999999999999999999999999877653
No 31
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.37 E-value=3.5e-11 Score=72.75 Aligned_cols=94 Identities=9% Similarity=-0.085 Sum_probs=78.4
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHhCChhHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDR--AVEAQACYSLGNTYTLLRDYPTA 81 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A 81 (104)
++.+++.+....++......++.++|.++...|++++|+.++++++.+.+..+++ +....++.++|.++...|++++|
T Consensus 75 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 154 (373)
T 1hz4_A 75 LMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEA 154 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHH
Confidence 4677778888888888888888999999999999999999999999988887765 55667788899999999999999
Q ss_pred HHHHHHHHHHHHHhcc
Q psy10736 82 IDYHLRHLIIAQQLMD 97 (104)
Q Consensus 82 ~~~~~~a~~~~~~~~~ 97 (104)
+.++++++++.+..++
T Consensus 155 ~~~~~~al~~~~~~~~ 170 (373)
T 1hz4_A 155 EASARSGIEVLSSYQP 170 (373)
T ss_dssp HHHHHHHHHHTTTSCG
T ss_pred HHHHHHHHHHhhccCc
Confidence 9999999888766544
No 32
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.35 E-value=2.7e-11 Score=71.01 Aligned_cols=92 Identities=16% Similarity=0.101 Sum_probs=80.3
Q ss_pred chhHHHHHHHHhC--CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCChh
Q psy10736 4 QPNDRLKIAREFG--DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL--GDRAVEAQACYSLGNTYTLLRDYP 79 (104)
Q Consensus 4 ~~~~a~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~ 79 (104)
++++++.++...+ +.+....++..+|.++...|++++|+.++++++.+.++. ++......++.++|.++...|+++
T Consensus 49 ~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 128 (311)
T 3nf1_A 49 LCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYK 128 (311)
T ss_dssp HHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHH
Confidence 4556666666554 677888999999999999999999999999999999887 666777899999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy10736 80 TAIDYHLRHLIIAQQL 95 (104)
Q Consensus 80 ~A~~~~~~a~~~~~~~ 95 (104)
+|+.++++++++.+..
T Consensus 129 ~A~~~~~~a~~~~~~~ 144 (311)
T 3nf1_A 129 EAEPLCKRALEIREKV 144 (311)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998665
No 33
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.33 E-value=8.2e-11 Score=68.97 Aligned_cols=92 Identities=25% Similarity=0.174 Sum_probs=80.8
Q ss_pred chhHHHHHHHHh--CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCChh
Q psy10736 4 QPNDRLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL--GDRAVEAQACYSLGNTYTLLRDYP 79 (104)
Q Consensus 4 ~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~ 79 (104)
++++++.+.+.. ++.+....++..+|.++...|++++|+.++++++.+.+.. ++......++.++|.++...|+++
T Consensus 91 ~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 170 (311)
T 3nf1_A 91 LLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYE 170 (311)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHH
Confidence 456666666665 6678889999999999999999999999999999998876 666777889999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy10736 80 TAIDYHLRHLIIAQQL 95 (104)
Q Consensus 80 ~A~~~~~~a~~~~~~~ 95 (104)
+|+.++++++++.+..
T Consensus 171 ~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 171 EVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987765
No 34
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.32 E-value=1.4e-11 Score=76.32 Aligned_cols=85 Identities=13% Similarity=0.075 Sum_probs=70.6
Q ss_pred HhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 14 EFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD---RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
...+....+.+|+.+|.++...|++++|++++++++++.+.... .+..+.++.++|.+|..+|++++|+.+++++++
T Consensus 43 ~~~~~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 43 EFQNREFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKH 122 (472)
T ss_dssp TSCC---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhCCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 34567777889999999999999999999999999999887643 233467899999999999999999999999999
Q ss_pred HHHHhcch
Q psy10736 91 IAQQLMDR 98 (104)
Q Consensus 91 ~~~~~~~~ 98 (104)
+.+....+
T Consensus 123 i~~~~~~~ 130 (472)
T 4g1t_A 123 VCEKFSSP 130 (472)
T ss_dssp HHHHSCCS
T ss_pred HhHhcccc
Confidence 98876543
No 35
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.31 E-value=2.6e-11 Score=65.84 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=62.1
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.+....++.++|.++...|++++|+.++.+++.+- +....+++.+|.++...|++++|+..|++++.+.+.
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKRE------ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcC------CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC
Confidence 55667899999999999999999999999999872 223578999999999999999999999999988544
No 36
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.31 E-value=3.1e-11 Score=60.88 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=62.7
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcchh
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 99 (104)
...++..+|.++...|++++|+.++++++++... ...++.++|.++...|++++|+..|++++++.+..++..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 78 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQK 78 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchh
Confidence 3567899999999999999999999999876322 235789999999999999999999999999988776654
No 37
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.31 E-value=1.1e-11 Score=65.16 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=60.5
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
|++|+..+++. ...|....++.++|.++...|++++|+..+++++++- +....++.++|.++...|++++|+.
T Consensus 29 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------p~~~~a~~~lg~~~~~~~~~~~A~~ 102 (126)
T 4gco_A 29 YPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLD------SKFIKGYIRKAACLVAMREWSKAQR 102 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh------hhhhHHHHHHHHHHHHCCCHHHHHH
Confidence 45566555432 2223345678888888888899999999888888761 1224678889999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
.|++++++-+
T Consensus 103 ~~~~al~l~P 112 (126)
T 4gco_A 103 AYEDALQVDP 112 (126)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHHCc
Confidence 9999987743
No 38
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.30 E-value=2.4e-11 Score=62.75 Aligned_cols=83 Identities=12% Similarity=0.102 Sum_probs=66.6
Q ss_pred hhHHHHHHHHh-CC---HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhH
Q psy10736 5 PNDRLKIAREF-GD---KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPT 80 (104)
Q Consensus 5 ~~~a~~~~~~~-~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 80 (104)
+++|+..+++. .. .+....++.++|.++...|++++|+.++++++..... ...++.++|.++...|++++
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN------HQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------chHHHHHHHHHHHHcCCHHH
Confidence 34455544433 22 5788899999999999999999999999999877322 24678999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy10736 81 AIDYHLRHLIIAQ 93 (104)
Q Consensus 81 A~~~~~~a~~~~~ 93 (104)
|+..++++++...
T Consensus 80 A~~~~~~al~~~p 92 (117)
T 3k9i_A 80 GVELLLKIIAETS 92 (117)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCC
Confidence 9999999998753
No 39
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.29 E-value=7.2e-11 Score=63.63 Aligned_cols=84 Identities=12% Similarity=0.057 Sum_probs=65.9
Q ss_pred hhHHHHHHH-HhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAR-EFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++++...+ .....+.....++.+|.+|...|++++|++++++++.+- +....++.++|.++...|++++|+.
T Consensus 13 ~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~------p~~~~a~~~lg~~~~~~~~~~~A~~ 86 (150)
T 4ga2_A 13 VERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ------ERDPKAHRFLGLLYELEENTDKAVE 86 (150)
T ss_dssp HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCchHHHHH
Confidence 456776554 445677778888899999999999999999999988762 1224678889999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
+|++++++.+.
T Consensus 87 ~~~~al~~~p~ 97 (150)
T 4ga2_A 87 CYRRSVELNPT 97 (150)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 99999877543
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.27 E-value=7.4e-11 Score=61.94 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
.|..+..+.++|+.+...|++++|+.+|++++++. +....++.++|.++..+|++++|+..+++++++-.
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 78 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRD------PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDS 78 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhh
Confidence 46778899999999999999999999999998762 12246889999999999999999999999998743
No 41
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.26 E-value=1.3e-11 Score=66.93 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=60.4
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...|....++.++|.++...|++++|+.+|++++.+... ...++.++|.++...|++++|+.
T Consensus 52 ~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~------~~~~~~~lg~~~~~lg~~~eA~~ 125 (151)
T 3gyz_A 52 IEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN------DYTPVFHTGQCQLRLKAPLKAKE 125 (151)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS------CCHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC------CcHHHHHHHHHHHHcCCHHHHHH
Confidence 45555555433 112334567888888888899999999999888876322 23567889999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
+|++++++..
T Consensus 126 ~~~~al~l~~ 135 (151)
T 3gyz_A 126 CFELVIQHSN 135 (151)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhCC
Confidence 9999988753
No 42
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.26 E-value=2.3e-10 Score=69.13 Aligned_cols=83 Identities=13% Similarity=-0.028 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
++......++..+|.++...|++++|+.++++++.+.+..+++.....++.++|.++...|++++|+.++++++++.+..
T Consensus 47 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~ 126 (373)
T 1hz4_A 47 GWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 126 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh
Confidence 34556778899999999999999999999999999999999998889999999999999999999999999999999876
Q ss_pred cch
Q psy10736 96 MDR 98 (104)
Q Consensus 96 ~~~ 98 (104)
+++
T Consensus 127 ~~~ 129 (373)
T 1hz4_A 127 HLE 129 (373)
T ss_dssp TCT
T ss_pred ccc
Confidence 553
No 43
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=3.6e-10 Score=69.35 Aligned_cols=95 Identities=12% Similarity=0.057 Sum_probs=86.2
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++.+++.+....++......++.++|.++...|++++|+.++.+++......++....+.++..+|.+|...|++.+|..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 196 (434)
T 4b4t_Q 117 VCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKA 196 (434)
T ss_dssp HHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHH
Confidence 46677778888888888899999999999999999999999999999998888888888999999999999999999999
Q ss_pred HHHHHHHHHHHhcch
Q psy10736 84 YHLRHLIIAQQLMDR 98 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~ 98 (104)
++++++.+....+++
T Consensus 197 ~~~~al~~~~~~~~~ 211 (434)
T 4b4t_Q 197 SLTAARTAANSIYCP 211 (434)
T ss_dssp HHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhhcCCCc
Confidence 999999998877654
No 44
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.9e-10 Score=59.84 Aligned_cols=84 Identities=12% Similarity=0.078 Sum_probs=65.8
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..+++. ...+....++.++|.++...|++++|+..+++++.+.. ....++.++|.++...|++++|+.
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~~~~~~A~~ 93 (126)
T 3upv_A 20 WPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP------NFVRAYIRKATAQIAVKEYASALE 93 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHHhCHHHHHH
Confidence 45566555432 11223357899999999999999999999999987621 124678999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
.+++++++...
T Consensus 94 ~~~~al~~~p~ 104 (126)
T 3upv_A 94 TLDAARTKDAE 104 (126)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhCcc
Confidence 99999998744
No 45
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.16 E-value=1.1e-09 Score=59.75 Aligned_cols=73 Identities=16% Similarity=0.243 Sum_probs=61.7
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC-----C-hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG-----D-RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~-----~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
.+..+.+.|+.+...|++++|+..|++++.+..... + .+..+.++.++|.++..+|++++|+.+|+++++++.
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 466789999999999999999999999999876521 1 122356999999999999999999999999999843
No 46
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.15 E-value=5.6e-10 Score=60.46 Aligned_cols=73 Identities=8% Similarity=0.069 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
...|.....++.+|.++...|++++|+.+|++++.+- +....++.++|.++...|++++|+..|++++.+.+.
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~------P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~ 102 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD------FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN 102 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC
Confidence 3446678889999999999999999999999998762 222467899999999999999999999999987544
No 47
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.15 E-value=2.1e-10 Score=61.09 Aligned_cols=85 Identities=19% Similarity=0.121 Sum_probs=64.6
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..++.. ...+....++..+|.++...|++++|+.++++++.+.. . ...++.++|.++...|++++|+.
T Consensus 34 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~----~~~~~~~lg~~~~~~g~~~~A~~ 107 (142)
T 2xcb_A 34 WDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI--N----EPRFPFHAAECHLQLGDLDGAES 107 (142)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--T----CTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC--C----CcHHHHHHHHHHHHcCCHHHHHH
Confidence 45666655433 11223356788999999999999999999999987632 1 13567899999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy10736 84 YHLRHLIIAQQL 95 (104)
Q Consensus 84 ~~~~a~~~~~~~ 95 (104)
+|++++++....
T Consensus 108 ~~~~al~~~p~~ 119 (142)
T 2xcb_A 108 GFYSARALAAAQ 119 (142)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHhCCCC
Confidence 999999887643
No 48
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.14 E-value=9.3e-10 Score=56.41 Aligned_cols=73 Identities=22% Similarity=0.101 Sum_probs=62.3
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcch
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDR 98 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 98 (104)
....++.++|.++...|++++|+.++++++.... ....++.++|.++...|++++|+..|++++++....++.
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 89 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP------TYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQ 89 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccH
Confidence 3456889999999999999999999999987632 124578899999999999999999999999998876654
No 49
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.13 E-value=1.9e-10 Score=62.52 Aligned_cols=87 Identities=15% Similarity=0.017 Sum_probs=66.7
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....++.++|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+.
T Consensus 27 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~ 100 (164)
T 3sz7_A 27 YSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDP------KYSKAWSRLGLARFDMADYKGAKE 100 (164)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHccCHHHHHH
Confidence 45566555433 11123467889999999999999999999999988732 124688999999999999999999
Q ss_pred HHHHHHHHHHHhcc
Q psy10736 84 YHLRHLIIAQQLMD 97 (104)
Q Consensus 84 ~~~~a~~~~~~~~~ 97 (104)
+|++++++.....+
T Consensus 101 ~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 101 AYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHHHHHSSSCC
T ss_pred HHHHHHHhCCCchH
Confidence 99999988755443
No 50
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.11 E-value=2.1e-09 Score=55.49 Aligned_cols=88 Identities=18% Similarity=0.177 Sum_probs=68.8
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL-GDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
+.+|+..++..- ..+....++..+|.++...|++++|+.++++++...... .+......++.++|.++...|++++|+
T Consensus 20 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 99 (131)
T 1elr_A 20 FDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAI 99 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 445555444321 112235678999999999999999999999999988764 344444788999999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 83 DYHLRHLIIA 92 (104)
Q Consensus 83 ~~~~~a~~~~ 92 (104)
.++++++++.
T Consensus 100 ~~~~~~~~~~ 109 (131)
T 1elr_A 100 HFYNKSLAEH 109 (131)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999864
No 51
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.11 E-value=1.1e-09 Score=59.30 Aligned_cols=75 Identities=17% Similarity=0.135 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC------------hHHHHHHHHHHHHHHHHhCChhHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD------------RAVEAQACYSLGNTYTLLRDYPTAIDYH 85 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 85 (104)
....+..+...|..+...|++++|+.+|.+++.+...... .+....++.++|.++...|++++|+.++
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3346778999999999999999999999999998665321 2334678999999999999999999999
Q ss_pred HHHHHHH
Q psy10736 86 LRHLIIA 92 (104)
Q Consensus 86 ~~a~~~~ 92 (104)
++++.+-
T Consensus 87 ~~al~~~ 93 (162)
T 3rkv_A 87 SEVLKRE 93 (162)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 9999874
No 52
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.11 E-value=3e-10 Score=61.09 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=62.3
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..++.. ...+....++.++|.++...|++++|+.++++++.+... ...+++++|.++...|++++|+.
T Consensus 37 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~------~~~~~~~lg~~~~~~g~~~~A~~ 110 (148)
T 2vgx_A 37 YEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX------EPRFPFHAAECLLQXGELAEAES 110 (148)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHH
T ss_pred hHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC------CchHHHHHHHHHHHcCCHHHHHH
Confidence 45566555433 112233556788899999999999999999998876321 13567899999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
+|++++++...
T Consensus 111 ~~~~al~~~p~ 121 (148)
T 2vgx_A 111 GLFLAQELIAN 121 (148)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHCcC
Confidence 99999988654
No 53
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.10 E-value=1.1e-09 Score=53.55 Aligned_cols=69 Identities=36% Similarity=0.512 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
++.....+..+|.++...|++++|+.++++++.... ....++.++|.++...|++++|+.++++++++.
T Consensus 5 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 5 PGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (91)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 345667889999999999999999999999987631 124678899999999999999999999999874
No 54
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.07 E-value=7.8e-10 Score=59.47 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=61.6
Q ss_pred hCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 15 FGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
....+.....+..+|..+...|++++|+..+++++.... ....++.++|.++...|++++|+..|++++.+.+.
T Consensus 14 l~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 87 (148)
T 2vgx_A 14 NEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH------YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX 87 (148)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 344466778899999999999999999999999887521 12467789999999999999999999999987543
No 55
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.07 E-value=2.1e-10 Score=62.48 Aligned_cols=85 Identities=14% Similarity=0.247 Sum_probs=63.5
Q ss_pred chhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccH----------HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy10736 4 QPNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEY----------QAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTY 72 (104)
Q Consensus 4 ~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~----------~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 72 (104)
.|++|+..++.. ...|....++.++|.++...+++ ++|+..|++++.+ .+....+++++|++|
T Consensus 17 ~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l------dP~~~~A~~~LG~ay 90 (158)
T 1zu2_A 17 LFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI------DPKKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh------CcCcHHHHHHHHHHH
Confidence 355666554432 23344567889999999998875 5888988888877 223457899999999
Q ss_pred HHhC-----------ChhHHHHHHHHHHHHHHH
Q psy10736 73 TLLR-----------DYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 73 ~~~g-----------~~~~A~~~~~~a~~~~~~ 94 (104)
...| ++++|+.+|++|+++-..
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 9875 899999999999987543
No 56
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.06 E-value=4.5e-09 Score=66.50 Aligned_cols=90 Identities=10% Similarity=-0.052 Sum_probs=77.7
Q ss_pred chhHHHHHHHHh--CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh-C-ChHHHHHHHHHHHHHHHHhCChh
Q psy10736 4 QPNDRLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL-G-DRAVEAQACYSLGNTYTLLRDYP 79 (104)
Q Consensus 4 ~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~g~~~ 79 (104)
++++++++.+.. .+++..+..+++||.+|..+|++++|+.++++|+++.+.. | +.+.......+++.++..++.++
T Consensus 373 ~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 373 YARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 466777766554 4778999999999999999999999999999999998875 3 45667788899999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy10736 80 TAIDYHLRHLIIAQ 93 (104)
Q Consensus 80 ~A~~~~~~a~~~~~ 93 (104)
+|+..|+++.+.+.
T Consensus 453 ~ae~~~~~~~~~~~ 466 (490)
T 3n71_A 453 QNEFMYHKMREAAL 466 (490)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987663
No 57
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.05 E-value=2.2e-09 Score=60.57 Aligned_cols=83 Identities=12% Similarity=-0.017 Sum_probs=64.5
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHH----------------hHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSN----------------LGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYS 67 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~----------------l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 67 (104)
+.+|+..+++. ...|....++.. +|.++...|++++|+..+++++.+.. .-..++.+
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~ 93 (208)
T 3urz_A 20 NGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAP------NNVDCLEA 93 (208)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC------CCHHHHHH
Confidence 45666655443 223344556666 99999999999999999999987622 22468899
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 68 LGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 68 l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+|.++...|++++|+.+|++++++.+
T Consensus 94 lg~~~~~~g~~~~A~~~~~~al~~~P 119 (208)
T 3urz_A 94 CAEMQVCRGQEKDALRMYEKILQLEA 119 (208)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999998744
No 58
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.05 E-value=1.3e-09 Score=57.10 Aligned_cols=84 Identities=15% Similarity=0.100 Sum_probs=65.6
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..++.. ...+....++.++|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+.
T Consensus 25 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~~~~~~A~~ 98 (137)
T 3q49_B 25 YPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDG------QSVKAHFFLGQCQLEMESYDEAIA 98 (137)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc------hhHHHHHHHHHHHHHHhhHHHHHH
Confidence 45555544432 11123356899999999999999999999999987632 124678999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
++++++++.+.
T Consensus 99 ~~~~a~~~~p~ 109 (137)
T 3q49_B 99 NLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHChh
Confidence 99999998876
No 59
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.05 E-value=7.7e-10 Score=60.85 Aligned_cols=67 Identities=24% Similarity=0.214 Sum_probs=57.9
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
..++..+|.++...|++++|++.+++++++. +....++.++|.+|...|++++|+.+|++++++-+.
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISIK------PGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHhc------chhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 4578889999999999999999999998762 122468899999999999999999999999987654
No 60
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.1e-09 Score=55.37 Aligned_cols=68 Identities=18% Similarity=0.194 Sum_probs=57.9
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
...+..+|.++...|++++|+.++++++.+... ...++.++|.++...|++++|+..+++++++.+..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ------NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 457889999999999999999999999876221 24678999999999999999999999999775443
No 61
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.04 E-value=2.3e-09 Score=55.69 Aligned_cols=67 Identities=13% Similarity=0.145 Sum_probs=58.2
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
.+..+..+|..+...|++++|+.++++++.+.. ....++.++|.++...|++++|+..+++++++..
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 69 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP 69 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 456789999999999999999999999987632 1247889999999999999999999999998743
No 62
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.04 E-value=1.9e-09 Score=65.97 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
..+....++.++|.++...|++++|+.++++++++. +....++.++|.+|...|++++|+.+|++++++..
T Consensus 268 ~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P 338 (370)
T 1ihg_A 268 LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID------PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAP 338 (370)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC------chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 566778899999999999999999999999998752 12357889999999999999999999999998753
No 63
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.04 E-value=5.7e-09 Score=54.11 Aligned_cols=86 Identities=14% Similarity=0.016 Sum_probs=66.5
Q ss_pred hhHHHHHHHHh----CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhH
Q psy10736 5 PNDRLKIAREF----GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPT 80 (104)
Q Consensus 5 ~~~a~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 80 (104)
+.+|+..++.. ++.+....++..+|.++...|++++|+.++++++..... ......++..+|.++...|++++
T Consensus 18 ~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~~~~~~la~~~~~~g~~~~ 94 (129)
T 2xev_A 18 YDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT---HDKAAGGLLKLGLSQYGEGKNTE 94 (129)
T ss_dssp HHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---STTHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC---CcccHHHHHHHHHHHHHcCCHHH
Confidence 45555555432 344444578899999999999999999999998876432 22235678999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy10736 81 AIDYHLRHLIIAQ 93 (104)
Q Consensus 81 A~~~~~~a~~~~~ 93 (104)
|+..+++++...+
T Consensus 95 A~~~~~~~~~~~p 107 (129)
T 2xev_A 95 AQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHHHHHHHST
T ss_pred HHHHHHHHHHHCC
Confidence 9999999997653
No 64
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.02 E-value=1.1e-09 Score=71.94 Aligned_cols=82 Identities=24% Similarity=0.268 Sum_probs=53.7
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....++.++|.++...|++++|+.+|++++++- +....++.++|.++..+|++++|++
T Consensus 25 ~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~------P~~~~a~~nLg~~l~~~g~~~~A~~ 98 (723)
T 4gyw_A 25 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS------PTFADAYSNMGNTLKEMQDVQGALQ 98 (723)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 44555544432 2223445667777777777777777777777777652 1224567788888888888888888
Q ss_pred HHHHHHHHH
Q psy10736 84 YHLRHLIIA 92 (104)
Q Consensus 84 ~~~~a~~~~ 92 (104)
.|++++++.
T Consensus 99 ~~~kAl~l~ 107 (723)
T 4gyw_A 99 CYTRAIQIN 107 (723)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 888887764
No 65
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=1.3e-08 Score=53.65 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=66.8
Q ss_pred chhHHHHHHHHh----CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChh
Q psy10736 4 QPNDRLKIAREF----GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP 79 (104)
Q Consensus 4 ~~~~a~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 79 (104)
-+.+|+..++.. ++.+....++.++|.++...|++++|+.++++++.... . ...++.++|.++...|+++
T Consensus 43 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--~----~~~~~~~~a~~~~~~~~~~ 116 (148)
T 2dba_A 43 DYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG--G----DVKALYRRSQALEKLGRLD 116 (148)
T ss_dssp CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS--C----CHHHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc--c----CHHHHHHHHHHHHHcCCHH
Confidence 355666655543 34444578899999999999999999999999987621 1 1467889999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy10736 80 TAIDYHLRHLIIAQ 93 (104)
Q Consensus 80 ~A~~~~~~a~~~~~ 93 (104)
+|+.++++++++..
T Consensus 117 ~A~~~~~~al~~~p 130 (148)
T 2dba_A 117 QAVLDLQRCVSLEP 130 (148)
T ss_dssp HHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999997743
No 66
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.01 E-value=5.9e-10 Score=58.04 Aligned_cols=84 Identities=12% Similarity=-0.012 Sum_probs=60.4
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..+++. ...+....++..+|.++...|++++|+..+++++.+.. ....++.++|.++...|++++|+.
T Consensus 33 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P------~~~~~~~~la~~~~~~g~~~~A~~ 106 (121)
T 1hxi_A 33 LAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP------KDIAVHAALAVSHTNEHNANAALA 106 (121)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHH
Confidence 34555444332 12233466788999999999999999999999887622 123578899999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
.+++++++...
T Consensus 107 ~~~~al~~~P~ 117 (121)
T 1hxi_A 107 SLRAWLLSQPQ 117 (121)
T ss_dssp HHHHHHC----
T ss_pred HHHHHHHhCcC
Confidence 99999876543
No 67
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.00 E-value=2.8e-09 Score=64.26 Aligned_cols=69 Identities=20% Similarity=0.204 Sum_probs=59.7
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+....++.++|.++...|++++|+.++++++.+.. ....+++++|.++...|++++|+.+|++++++..
T Consensus 193 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 261 (336)
T 1p5q_A 193 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS------NNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP 261 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
Confidence 34478999999999999999999999999998732 2246889999999999999999999999998743
No 68
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.99 E-value=4.2e-09 Score=57.85 Aligned_cols=65 Identities=18% Similarity=0.298 Sum_probs=53.2
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
..+|.++|.++...|++++|+.+|++++++-. .-..++..+|.++...|++++|+..+++++...
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~ 69 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADP------NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLD 69 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 45788999999999999999999999987621 124678889999999999999999988887543
No 69
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.99 E-value=3.3e-09 Score=57.52 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+.+.....+..+|.++...|++++|+.++++++.+... ...++.++|.++...|++++|+.+|++++++..
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 76 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA------NPIYLSNRAAAYSASGQHEKAAEDAELATVVDP 76 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 34456778999999999999999999999999887321 246889999999999999999999999998743
No 70
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.99 E-value=1e-08 Score=52.04 Aligned_cols=70 Identities=11% Similarity=-0.005 Sum_probs=59.6
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD-RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.-+..+|..+...+++..|+.++++|+........ ......++.++|.++...|++++|+.++++++.+.
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 44678999999999999999999999988764432 23446788999999999999999999999999764
No 71
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.98 E-value=1.5e-09 Score=58.39 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=63.9
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...|....++..+|.++...|++++|+.++++++++. +....++.++|.++...|++.+|..
T Consensus 47 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~~~~~~aa~ 120 (150)
T 4ga2_A 47 YDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELN------PTQKDLVLKIAELLCKNDVTDGRAK 120 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHCSSSSHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCChHHHHH
Confidence 55666555433 2223446789999999999999999999999998872 1224678999999999999988766
Q ss_pred H-HHHHHHHHHH
Q psy10736 84 Y-HLRHLIIAQQ 94 (104)
Q Consensus 84 ~-~~~a~~~~~~ 94 (104)
. +++++++.+.
T Consensus 121 ~~~~~al~l~P~ 132 (150)
T 4ga2_A 121 YWVERAAKLFPG 132 (150)
T ss_dssp HHHHHHHHHSTT
T ss_pred HHHHHHHHhCcC
Confidence 5 6899987543
No 72
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.98 E-value=4.8e-09 Score=58.77 Aligned_cols=83 Identities=20% Similarity=0.182 Sum_probs=67.5
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
-+++|+..++..-++ ...++.++|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+.
T Consensus 21 ~~~~A~~~~~~a~~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~------~~~~~~~~lg~~~~~~~~~~~A~~ 92 (213)
T 1hh8_A 21 DWKGALDAFSAVQDP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDK------HLAVAYFQRGMLYYQTEKYDLAIK 92 (213)
T ss_dssp CHHHHHHHHHTSSSC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHcCC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc------cchHHHHHHHHHHHHcccHHHHHH
Confidence 356777777665433 356899999999999999999999999987631 224678999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
++++++++.+.
T Consensus 93 ~~~~al~~~~~ 103 (213)
T 1hh8_A 93 DLKEALIQLRG 103 (213)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHHHHhCCC
Confidence 99999986543
No 73
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.96 E-value=1.3e-08 Score=58.72 Aligned_cols=82 Identities=13% Similarity=0.036 Sum_probs=58.9
Q ss_pred hhHHHHHHHHhC-----CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChh
Q psy10736 5 PNDRLKIAREFG-----DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP 79 (104)
Q Consensus 5 ~~~a~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 79 (104)
+++|+..+++.- +++....++..+|.++...|++++|+.++++++.... ....++..+|.++...|+++
T Consensus 21 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 21 QEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRP------DMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCC------CcHHHHHHHHHHHHHccCHH
Confidence 456666555443 2567788889999999999999999999988877521 11345677777777777777
Q ss_pred HHHHHHHHHHHHH
Q psy10736 80 TAIDYHLRHLIIA 92 (104)
Q Consensus 80 ~A~~~~~~a~~~~ 92 (104)
+|+.++++++++.
T Consensus 95 ~A~~~~~~al~~~ 107 (275)
T 1xnf_A 95 AAYEAFDSVLELD 107 (275)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 7777777777653
No 74
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.2e-08 Score=58.17 Aligned_cols=70 Identities=21% Similarity=0.292 Sum_probs=62.3
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG-DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..++..+|.++...|++++|+.++.+++.+..... +......++..+|.++...|++++|+.++++++.+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 56789999999999999999999999999887764 44445789999999999999999999999999984
No 75
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.94 E-value=4.7e-09 Score=65.70 Aligned_cols=69 Identities=22% Similarity=0.227 Sum_probs=59.6
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+....++.++|.++...|++++|+.++++++.+.. ....+++++|.+|...|++++|+.+|++++++..
T Consensus 314 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p------~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P 382 (457)
T 1kt0_A 314 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS------ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 382 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 34478999999999999999999999999998732 1257899999999999999999999999987644
No 76
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.93 E-value=1.6e-08 Score=53.71 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
...+.....+..+|..+...|++++|+..+++++.... ....++.++|.++...|++++|+.+|++++.+.+
T Consensus 12 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 12 GLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDH------YDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34456677889999999999999999999999886521 1246788999999999999999999999998754
No 77
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.93 E-value=4.4e-09 Score=65.17 Aligned_cols=90 Identities=7% Similarity=-0.086 Sum_probs=69.0
Q ss_pred chhHHHHHHHHhCC---HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHh--C
Q psy10736 4 QPNDRLKIAREFGD---KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRA--VEAQACYSLGNTYTLL--R 76 (104)
Q Consensus 4 ~~~~a~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~l~~~~~~~--g 76 (104)
++++|+++.+.... .+....++.++|.+|..+|++++|+.++++++.+.+....+. ..+.++.++|.++... +
T Consensus 73 ~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (472)
T 4g1t_A 73 CLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGN 152 (472)
T ss_dssp HHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccc
Confidence 45666666655432 345577899999999999999999999999999988765432 2356777888777655 4
Q ss_pred ChhHHHHHHHHHHHHHH
Q psy10736 77 DYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 77 ~~~~A~~~~~~a~~~~~ 93 (104)
++++|+.+|++++++-+
T Consensus 153 ~y~~A~~~~~kal~~~p 169 (472)
T 4g1t_A 153 QNERAKVCFEKALEKKP 169 (472)
T ss_dssp HHHHHHHHHHHHHHHST
T ss_pred cHHHHHHHHHHHHHhCC
Confidence 69999999999998743
No 78
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.93 E-value=1.8e-09 Score=60.49 Aligned_cols=89 Identities=11% Similarity=0.015 Sum_probs=67.7
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC----------ChHHHHHHHHHHHHHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG----------DRAVEAQACYSLGNTYT 73 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~l~~~~~ 73 (104)
+.+|+..++..- ..+....++.++|.++...|++++|+.++++++....... ..+....++.++|.++.
T Consensus 53 ~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 132 (213)
T 1hh8_A 53 MTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYA 132 (213)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHH
Confidence 445555443321 1123457889999999999999999999999998755433 22334578999999999
Q ss_pred HhCChhHHHHHHHHHHHHHH
Q psy10736 74 LLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 74 ~~g~~~~A~~~~~~a~~~~~ 93 (104)
..|++++|+.++++++++..
T Consensus 133 ~~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 133 KKEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp HTTCHHHHHHHHHHHHTTCC
T ss_pred HccCHHHHHHHHHHHHHcCc
Confidence 99999999999999997754
No 79
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.93 E-value=6.4e-09 Score=59.00 Aligned_cols=84 Identities=11% Similarity=0.044 Sum_probs=62.9
Q ss_pred hhHHHHHHHHhCCH-H-HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 5 PNDRLKIAREFGDK-A-AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 5 ~~~a~~~~~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
+.+|+..+++.-.. + ....++.++|.++...|++++|+.++++++... +....++..+|.++...|++++|+
T Consensus 23 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~~~~~~A~ 96 (228)
T 4i17_A 23 YAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN------YNLANAYIGKSAAYRDMKNNQEYI 96 (228)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT------CSHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC------cchHHHHHHHHHHHHHcccHHHHH
Confidence 45566555432110 0 223567779999999999999999999988542 224578899999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy10736 83 DYHLRHLIIAQQ 94 (104)
Q Consensus 83 ~~~~~a~~~~~~ 94 (104)
..+++++++.+.
T Consensus 97 ~~~~~al~~~p~ 108 (228)
T 4i17_A 97 ATLTEGIKAVPG 108 (228)
T ss_dssp HHHHHHHHHSTT
T ss_pred HHHHHHHHHCCC
Confidence 999999987544
No 80
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.92 E-value=3.6e-09 Score=69.63 Aligned_cols=67 Identities=24% Similarity=0.208 Sum_probs=48.5
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
....++.++|.++...|++++|+++|++++++- +....++.++|.++...|++++|+.+|++++++.
T Consensus 75 ~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~------P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~ 141 (723)
T 4gyw_A 75 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQIN------PAFADAHSNLASIHKDSGNIPEAIASYRTALKLK 141 (723)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 345677888888888888888888888877652 1224567777777777777777777777777653
No 81
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.90 E-value=6.5e-09 Score=63.80 Aligned_cols=97 Identities=7% Similarity=0.003 Sum_probs=80.2
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++.+++.+....++......+...++.++...|+++.|+.++++++......++....+.++.++|.++...|++.+|..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 156 (434)
T 4b4t_Q 77 FIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLA 156 (434)
T ss_dssp HHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHH
Confidence 34455555555666666777788888888889999999999999999999888877788899999999999999999999
Q ss_pred HHHHHHHHHHHhcchhh
Q psy10736 84 YHLRHLIIAQQLMDRVG 100 (104)
Q Consensus 84 ~~~~a~~~~~~~~~~~~ 100 (104)
.+++++......++...
T Consensus 157 ~l~~~~~~~~~~~~~~~ 173 (434)
T 4b4t_Q 157 LINDLLREFKKLDDKPS 173 (434)
T ss_dssp HHHHHHHHHTTSSCSTH
T ss_pred HHHHHHHHHHhcccchh
Confidence 99999988877665543
No 82
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.5e-07 Score=53.70 Aligned_cols=88 Identities=22% Similarity=0.278 Sum_probs=61.0
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHH--------------------HhCChHHHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ--------------------DLGDRAVEAQ 63 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~--------------------~~~~~~~~~~ 63 (104)
+.+++.+....+ +.+....++..+|.++...|++++|+.++++++.+.. .....+....
T Consensus 61 ~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 140 (258)
T 3uq3_A 61 LNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAE 140 (258)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHH
Confidence 344444443332 4445578889999999999999999999999887311 0112233456
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 64 ACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 64 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
++..+|.++...|++++|+.++++++++.
T Consensus 141 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 169 (258)
T 3uq3_A 141 EARLEGKEYFTKSDWPNAVKAYTEMIKRA 169 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 77888888888888888888888887654
No 83
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.89 E-value=2.7e-08 Score=55.43 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=57.9
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
..++.++|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+.+|++++++..
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 153 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDK------NNVKALYKLGVANMYFGFLEEAKENLYKAASLNP 153 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC
Confidence 47899999999999999999999999998721 2246889999999999999999999999997743
No 84
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.88 E-value=3.1e-08 Score=51.00 Aligned_cols=69 Identities=14% Similarity=0.212 Sum_probs=59.3
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
....+..+|..+...|++++|+.++.+++.... ....++.++|.++...|++++|+.++++++.+....
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDP------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 456789999999999999999999999987631 124678899999999999999999999999987754
No 85
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.87 E-value=2.3e-08 Score=51.73 Aligned_cols=84 Identities=17% Similarity=0.144 Sum_probs=65.2
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....++..+|.++...|++++|+.++++++.... ....++.++|.++...|++++|+.
T Consensus 32 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~~~~~~A~~ 105 (133)
T 2lni_A 32 YPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP------TFIKGYTRKAAALEAMKDYTKAMD 105 (133)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------CchHHHHHHHHHHHHHhhHHHHHH
Confidence 45666655543 22233467889999999999999999999999987621 124678899999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
++++++++...
T Consensus 106 ~~~~~~~~~p~ 116 (133)
T 2lni_A 106 VYQKALDLDSS 116 (133)
T ss_dssp HHHHHHHHCGG
T ss_pred HHHHHHHhCCC
Confidence 99999977543
No 86
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.87 E-value=6.1e-09 Score=59.06 Aligned_cols=88 Identities=6% Similarity=-0.109 Sum_probs=67.5
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD-RAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
+++|+..++.. ...+....++..+|.++...|++++|+.++++++.+...... ....+.++.++|.++...|++++|+
T Consensus 58 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~ 137 (228)
T 4i17_A 58 YKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAE 137 (228)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHH
Confidence 45566554432 334456778999999999999999999999999876432211 1224567999999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 83 DYHLRHLIIA 92 (104)
Q Consensus 83 ~~~~~a~~~~ 92 (104)
.+|++++++.
T Consensus 138 ~~~~~al~~~ 147 (228)
T 4i17_A 138 ENYKHATDVT 147 (228)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHHhcC
Confidence 9999998763
No 87
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.86 E-value=3.3e-08 Score=51.67 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=58.0
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
....+..+|..+...|++++|+.++.+++.... ....++.++|.++...|++++|+..+++++.+.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p 74 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNP------LVAVYYTNRALCYLKMQQPEQALADCRRALELDG 74 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCc------CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc
Confidence 356789999999999999999999999988632 1246889999999999999999999999998753
No 88
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.85 E-value=3.6e-08 Score=59.45 Aligned_cols=76 Identities=17% Similarity=0.196 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC---------hHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD---------RAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
.+....++.++|.++...|++++|+.+|++++.+.....+ ......++.++|.++...|++++|+.+|+++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4566788999999999999999999999999988654321 1223678999999999999999999999999
Q ss_pred HHHHH
Q psy10736 89 LIIAQ 93 (104)
Q Consensus 89 ~~~~~ 93 (104)
+++..
T Consensus 223 l~~~p 227 (336)
T 1p5q_A 223 LELDS 227 (336)
T ss_dssp HHHCT
T ss_pred HHhCC
Confidence 98743
No 89
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.85 E-value=2.9e-08 Score=49.31 Aligned_cols=64 Identities=19% Similarity=0.214 Sum_probs=53.4
Q ss_pred HHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHH-HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 26 SNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQ-ACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 26 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
...|..+...|++++|+..+++++.... + ... ++.++|.++...|++++|+.+|++++++....
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p---~---~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEP---V---GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCS---S---THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCC---C---cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 5678899999999999999999887521 1 134 78999999999999999999999999875443
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.84 E-value=1.7e-08 Score=54.19 Aligned_cols=66 Identities=12% Similarity=0.031 Sum_probs=52.6
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
..++.++|.++...|++++|+.++.+++.... ....++.++|.++...|++++|+.++++++++..
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDK------KYIKGYYRRAASNMALGKFRAALRDYETVVKVKP 112 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 56778888888889999999999988887621 1235778889999999999999999988887643
No 91
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.84 E-value=3.4e-08 Score=51.27 Aligned_cols=65 Identities=17% Similarity=0.027 Sum_probs=55.2
Q ss_pred HHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 24 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 24 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.+..+|..+...|++++|+..+++++.... ....++..+|.++...|++++|+..|++++++...
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEP------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 357789999999999999999999987621 22467899999999999999999999999987543
No 92
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.84 E-value=2e-08 Score=51.62 Aligned_cols=66 Identities=18% Similarity=0.209 Sum_probs=54.5
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
..++..+|.++...|++++|+.++.+++.... ....++..+|.++...|++++|+.++++++++..
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p 111 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDP------AYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP 111 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc
Confidence 56788899999999999999999999887521 1145788999999999999999999999987743
No 93
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.83 E-value=2.9e-08 Score=55.34 Aligned_cols=75 Identities=25% Similarity=0.280 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCCh----------HHHHHHHHHHHHHHHHhCChhHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDR----------AVEAQACYSLGNTYTLLRDYPTAIDYHLR 87 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 87 (104)
....+..+..+|..+...|++++|+.++.+++.+.....+. .....++.++|.++...|++++|+.++++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34567789999999999999999999999999865443211 11247889999999999999999999999
Q ss_pred HHHHH
Q psy10736 88 HLIIA 92 (104)
Q Consensus 88 a~~~~ 92 (104)
++.+.
T Consensus 114 al~~~ 118 (198)
T 2fbn_A 114 VLKID 118 (198)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 99874
No 94
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.83 E-value=1.3e-08 Score=51.54 Aligned_cols=83 Identities=18% Similarity=0.043 Sum_probs=61.7
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..++..- ..+....++..+|.++...|++++|+.++++++.... ....++.++|.++...|++++|..
T Consensus 20 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~A~~ 93 (118)
T 1elw_A 20 IDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP------DWGKGYSRKAAALEFLNRFEEAKR 93 (118)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHHhhHHHHHH
Confidence 445555444321 1122356788999999999999999999999887622 124678899999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
++++++++..
T Consensus 94 ~~~~~~~~~~ 103 (118)
T 1elw_A 94 TYEEGLKHEA 103 (118)
T ss_dssp HHHHHHTTCT
T ss_pred HHHHHHHcCC
Confidence 9999987643
No 95
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.81 E-value=3.3e-08 Score=57.19 Aligned_cols=88 Identities=17% Similarity=0.067 Sum_probs=69.2
Q ss_pred chhHHHHHHHHh----CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH-----
Q psy10736 4 QPNDRLKIAREF----GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----- 74 (104)
Q Consensus 4 ~~~~a~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----- 74 (104)
-+.+|+..++.. ++.+....++..+|.++...|++++|+..+++++....... ....++..+|.++..
T Consensus 30 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~---~~~~a~~~lg~~~~~~~~~~ 106 (261)
T 3qky_A 30 KYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP---RVPQAEYERAMCYYKLSPPY 106 (261)
T ss_dssp CHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---THHHHHHHHHHHHHHHCCCT
T ss_pred CHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc---hhHHHHHHHHHHHHHhcccc
Confidence 356777766654 23344478899999999999999999999999887643322 234788999999999
Q ss_pred ---hCChhHHHHHHHHHHHHHHH
Q psy10736 75 ---LRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 75 ---~g~~~~A~~~~~~a~~~~~~ 94 (104)
.|++++|+..|++++...+.
T Consensus 107 ~~~~~~~~~A~~~~~~~l~~~p~ 129 (261)
T 3qky_A 107 ELDQTDTRKAIEAFQLFIDRYPN 129 (261)
T ss_dssp TSCCHHHHHHHHHHHHHHHHCTT
T ss_pred cccchhHHHHHHHHHHHHHHCcC
Confidence 99999999999999977543
No 96
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.81 E-value=1.8e-08 Score=57.11 Aligned_cols=26 Identities=23% Similarity=0.174 Sum_probs=11.6
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 65 CYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 65 ~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
+.++|.++...|++++|+..|+++++
T Consensus 121 ~~~lg~~~~~~g~~~~A~~~~~~al~ 146 (217)
T 2pl2_A 121 HLQRGLVYALLGERDKAEASLKQALA 146 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHh
Confidence 34444444444444444444444443
No 97
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.81 E-value=7.1e-08 Score=59.01 Aligned_cols=74 Identities=19% Similarity=0.250 Sum_probs=63.0
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC----------ChHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG----------DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
...+..+..+|..+...|++++|+..|++++.+..... .......++.++|.++...|++++|+.+++++
T Consensus 220 ~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 299 (370)
T 1ihg_A 220 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 34566789999999999999999999999999766531 34455789999999999999999999999999
Q ss_pred HHHH
Q psy10736 89 LIIA 92 (104)
Q Consensus 89 ~~~~ 92 (104)
+++.
T Consensus 300 l~~~ 303 (370)
T 1ihg_A 300 LEID 303 (370)
T ss_dssp HTTC
T ss_pred HHhC
Confidence 9763
No 98
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.80 E-value=1.7e-08 Score=60.76 Aligned_cols=69 Identities=22% Similarity=0.222 Sum_probs=52.2
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhc
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLM 96 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 96 (104)
..++.++|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+.++++++++.+...
T Consensus 247 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 247 YSLWNRLGATLANGDRSEEAVEAYTRALEIQP------GFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC------CchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccC
Confidence 45677788888888888888888888776521 1246778888889999999999999999888876643
No 99
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.78 E-value=1.4e-07 Score=48.35 Aligned_cols=71 Identities=21% Similarity=0.318 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
...+.....+..+|..+...|++++|+.++++++..... ...++..+|.++...|++++|+.++++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 76 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA------NAVYFCNRAAAYSKLGNYAGAVQDCERAICID 76 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC
Confidence 345677888999999999999999999999999876221 24678899999999999999999999999764
No 100
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.78 E-value=1.1e-07 Score=59.63 Aligned_cols=76 Identities=18% Similarity=0.184 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC---------hHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD---------RAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
.+..+..+.++|..+...|++++|+.+|.+++.+...... ......++.++|.++..+|++++|+.+|+++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3566788999999999999999999999999987654321 2233678999999999999999999999999
Q ss_pred HHHHH
Q psy10736 89 LIIAQ 93 (104)
Q Consensus 89 ~~~~~ 93 (104)
+++..
T Consensus 344 l~~~p 348 (457)
T 1kt0_A 344 LGLDS 348 (457)
T ss_dssp HHHST
T ss_pred HhcCC
Confidence 98743
No 101
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.77 E-value=1.7e-08 Score=63.58 Aligned_cols=83 Identities=11% Similarity=0.024 Sum_probs=65.5
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....++.++|.++...|++++|+.++++++++. +....++.++|.+|..+|++++|+.
T Consensus 22 ~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~------p~~~~~~~~lg~~~~~~g~~~eA~~ 95 (477)
T 1wao_1 22 YENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD------KKYIKGYYRRAASNMALGKFRAALR 95 (477)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC------TTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 55666555433 1122347789999999999999999999999998762 1234688999999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
.+++++++..
T Consensus 96 ~~~~al~~~p 105 (477)
T 1wao_1 96 DYETVVKVKP 105 (477)
T ss_dssp HHHHHHHHST
T ss_pred HHHHHHHhCC
Confidence 9999998743
No 102
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.77 E-value=3.4e-08 Score=58.21 Aligned_cols=89 Identities=17% Similarity=0.259 Sum_probs=62.9
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHhCChhH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDR---AVEAQACYSLGNTYTLLRDYPT 80 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---~~~~~~~~~l~~~~~~~g~~~~ 80 (104)
+++|+..++.. ...+....++..+|.++...|++++|+.++++++...+..++. +....++.++|.++...|++++
T Consensus 175 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 254 (330)
T 3hym_B 175 SKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAE 254 (330)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHH
Confidence 34555544432 2223345677888888888888899988888888877655443 2224677888888888888888
Q ss_pred HHHHHHHHHHHHH
Q psy10736 81 AIDYHLRHLIIAQ 93 (104)
Q Consensus 81 A~~~~~~a~~~~~ 93 (104)
|+.++++++++..
T Consensus 255 A~~~~~~a~~~~~ 267 (330)
T 3hym_B 255 ALDYHRQALVLIP 267 (330)
T ss_dssp HHHHHHHHHHHST
T ss_pred HHHHHHHHHhhCc
Confidence 8888888887643
No 103
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.77 E-value=3.1e-08 Score=56.14 Aligned_cols=83 Identities=14% Similarity=0.096 Sum_probs=66.0
Q ss_pred hhHHHHHHHH-hCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh--------
Q psy10736 5 PNDRLKIARE-FGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL-------- 75 (104)
Q Consensus 5 ~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-------- 75 (104)
+++|+..+++ ....|....++.++|.++...|++++|+..+++++.+. +....++.++|.++...
T Consensus 21 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~------P~~~~a~~~lg~~~~~~~~~~~~~~ 94 (217)
T 2pl2_A 21 YDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVART------PRYLGGYMVLSEAYVALYRQAEDRE 94 (217)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHTCSSHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHhhhhhhhhc
Confidence 5566665554 33444557788999999999999999999999998762 22246788999999999
Q ss_pred ---CChhHHHHHHHHHHHHHH
Q psy10736 76 ---RDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 76 ---g~~~~A~~~~~~a~~~~~ 93 (104)
|++++|+..+++++++.+
T Consensus 95 ~~~g~~~~A~~~~~~al~~~P 115 (217)
T 2pl2_A 95 RGKGYLEQALSVLKDAERVNP 115 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT
T ss_pred ccccCHHHHHHHHHHHHHhCc
Confidence 999999999999998743
No 104
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.77 E-value=7.3e-09 Score=62.53 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=55.4
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.++.++|.++...|++++|+.++++++.+.. ....+++++|.+|...|++++|+.+|++++++...
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p------~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~ 296 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEE------KNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPD 296 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 4899999999999999999999999987621 22468899999999999999999999999877544
No 105
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.75 E-value=1.5e-07 Score=47.52 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=56.3
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
...+..+|..+...|++++|+.++++++..... ...++..+|.++...|++++|+..+++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 69 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPH------NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc
Confidence 467889999999999999999999999876321 245788999999999999999999999997643
No 106
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.75 E-value=9.3e-08 Score=48.69 Aligned_cols=65 Identities=38% Similarity=0.558 Sum_probs=52.4
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
..++..+|.++...|++++|+.++++++.... . ...++..+|.++...|++++|+.++++++++.
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~----~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 107 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--N----NAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 107 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--T----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC--c----cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 45678889999999999999999998876521 1 13567888999999999999999999988764
No 107
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.74 E-value=1.9e-08 Score=59.22 Aligned_cols=85 Identities=15% Similarity=0.099 Sum_probs=66.0
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..+++. ...+....++.++|.++...|++++|+..+++++.+. +....++.++|.++...|++++|+.
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~lg~~~~~~g~~~~A~~ 93 (281)
T 2c2l_A 20 YPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELD------GQSVKAHFFLGQCQLEMESYDEAIA 93 (281)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 45566555432 1112245678999999999999999999999988752 1224688999999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy10736 84 YHLRHLIIAQQL 95 (104)
Q Consensus 84 ~~~~a~~~~~~~ 95 (104)
.|++++++....
T Consensus 94 ~~~~al~l~p~~ 105 (281)
T 2c2l_A 94 NLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHhCccc
Confidence 999999987754
No 108
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.74 E-value=3.2e-08 Score=59.53 Aligned_cols=86 Identities=16% Similarity=0.034 Sum_probs=66.0
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++.- ..+....++..+|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+.
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~~~~A~~ 154 (365)
T 4eqf_A 81 LPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQP------NNLKALMALAVSYTNTSHQQDACE 154 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHccccHHHHHH
Confidence 445555554331 1123366789999999999999999999999987621 124678999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q psy10736 84 YHLRHLIIAQQLM 96 (104)
Q Consensus 84 ~~~~a~~~~~~~~ 96 (104)
.+++++++.+...
T Consensus 155 ~~~~al~~~p~~~ 167 (365)
T 4eqf_A 155 ALKNWIKQNPKYK 167 (365)
T ss_dssp HHHHHHHHCHHHH
T ss_pred HHHHHHHhCccch
Confidence 9999998766543
No 109
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.72 E-value=1.4e-07 Score=48.00 Aligned_cols=67 Identities=37% Similarity=0.549 Sum_probs=56.6
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
....++..+|.++...|++++|+.++++++.... + ...++..+|.++...|++++|+.++++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP---N---NAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---T---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc---C---cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 3467789999999999999999999999987521 1 23578899999999999999999999998763
No 110
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.72 E-value=5.6e-08 Score=58.28 Aligned_cols=68 Identities=21% Similarity=0.195 Sum_probs=51.9
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
..++..+|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+.++++++.+.+..
T Consensus 251 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 251 YLLWNKLGATLANGNQSEEAVAAYRRALELQP------GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 45677778888888888888888888776521 123577888999999999999999999998887655
No 111
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.71 E-value=2.6e-07 Score=49.45 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=59.0
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
...+..+..+|..+...|++++|+.++.+++..... ...++.++|.++...|++++|+.++++++.+..
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 78 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS------NAIYYGNRSLAYLRTECYGYALGDATRAIELDK 78 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 345778999999999999999999999999876321 246788999999999999999999999998743
No 112
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.71 E-value=3.2e-08 Score=49.65 Aligned_cols=82 Identities=11% Similarity=0.072 Sum_probs=47.5
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-CChhHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL-RDYPTAI 82 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~ 82 (104)
+.+|+..+++.- ..+....++.++|.++...|++++|+.++++++.... + .....++.++|.++... |++++|+
T Consensus 22 ~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---~-~~~~~~~~~l~~~~~~~~~~~~~A~ 97 (112)
T 2kck_A 22 YTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIE---D-EYNKDVWAAKADALRYIEGKEVEAE 97 (112)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC---C-TTCHHHHHHHHHHHTTCSSCSHHHH
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc---c-cchHHHHHHHHHHHHHHhCCHHHHH
Confidence 344444443322 2233456666777777777777777777777665421 1 00234566777777777 7777777
Q ss_pred HHHHHHHH
Q psy10736 83 DYHLRHLI 90 (104)
Q Consensus 83 ~~~~~a~~ 90 (104)
+++++++.
T Consensus 98 ~~~~~~~~ 105 (112)
T 2kck_A 98 IAEARAKL 105 (112)
T ss_dssp HHHHHHGG
T ss_pred HHHHHHhh
Confidence 77766654
No 113
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.71 E-value=1.7e-08 Score=62.10 Aligned_cols=64 Identities=9% Similarity=-0.100 Sum_probs=32.2
Q ss_pred HHHHHHhHHHHHHhcc-HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGE-YQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~-~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..+++++|.++...|+ +++|+.++++++.+..+ ...++.++|.++...|++++|+.+|++++++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~------~~~a~~~~g~~~~~~g~~~eAl~~~~kal~l 195 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK------NYQVWHHRRVLVEWLRDPSQELEFIADILNQ 195 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4456666666666664 66666666666554111 1233444444444444444444444444433
No 114
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.71 E-value=2.5e-07 Score=53.46 Aligned_cols=90 Identities=10% Similarity=-0.116 Sum_probs=65.8
Q ss_pred hhHHHHHHHHh----CCHHHHHHHHHHhHHHHHH--------hccHHHHHHHHHHHHHHHHHhCChHHH-----------
Q psy10736 5 PNDRLKIAREF----GDKAAERRANSNLGNSHIF--------LGEYQAASEHYKRTLVLAQDLGDRAVE----------- 61 (104)
Q Consensus 5 ~~~a~~~~~~~----~~~~~~~~~~~~l~~~~~~--------~~~~~~A~~~~~~al~~~~~~~~~~~~----------- 61 (104)
+.+|+..++.. ++.+....+++.+|.++.. .|++++|+..+++++............
T Consensus 68 ~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~ 147 (261)
T 3qky_A 68 YLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKL 147 (261)
T ss_dssp HHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHH
Confidence 45555544433 2334566789999999999 999999999999998765433222211
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
...+..+|.+|...|++++|+..|+++++..+.
T Consensus 148 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 148 ARKQYEAARLYERRELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 112388999999999999999999999976543
No 115
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.70 E-value=4.3e-08 Score=60.28 Aligned_cols=83 Identities=8% Similarity=-0.012 Sum_probs=62.3
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....+++++|.++...|++++|+..+++++.+- +.-..++.++|.++...|++++|+.
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld------P~~~~a~~~lg~~~~~~g~~~eAl~ 221 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQD------AKNYHAWQHRQWVIQEFKLWDNELQ 221 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHTCCTTHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------ccCHHHHHHHHHHHHHcCChHHHHH
Confidence 45555544433 2223346678899999999999999999999988762 1224678899999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
+|++++++-.
T Consensus 222 ~~~~al~l~P 231 (382)
T 2h6f_A 222 YVDQLLKEDV 231 (382)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHhCC
Confidence 9999998754
No 116
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.69 E-value=7.5e-08 Score=55.57 Aligned_cols=73 Identities=14% Similarity=0.014 Sum_probs=61.9
Q ss_pred HHHHHHhHHHHHHhcc---HHHHHHHHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGE---YQAASEHYKRTLVLAQDLGD--RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~---~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
..++..+|.++...++ +++|+.++++++++....++ ......++..+|.+|...|++++|+.++++++++.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 253 (272)
T 3u4t_A 176 YIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPT 253 (272)
T ss_dssp HHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 5678888999999998 88899999999998866555 3445678999999999999999999999999987543
No 117
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.68 E-value=2.4e-07 Score=50.18 Aligned_cols=66 Identities=17% Similarity=0.188 Sum_probs=42.7
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.++..+|.++...|++++|+.++++++.... ....++..+|.++...|++++|..++++++++...
T Consensus 111 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 176 (186)
T 3as5_A 111 NVRFRLGVALDNLGRFDEAIDSFKIALGLRP------NEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEG 176 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc------cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 4456666666666666666666666655421 11345667777777777777777777777766543
No 118
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.68 E-value=2.7e-08 Score=57.47 Aligned_cols=85 Identities=8% Similarity=0.006 Sum_probs=52.6
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....++..+|.++...|++++|+.++++++.. ..++.....++..+|.++...|++++|+.
T Consensus 19 ~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~~lg~~~~~~~~~~~A~~ 95 (272)
T 3u4t_A 19 YAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK---VNATKAKSADFEYYGKILMKKGQDSLAIQ 95 (272)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT---SCTTTCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCchhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 44555544432 111222345677777777777777777777777652 13333335567777777777777777777
Q ss_pred HHHHHHHHH
Q psy10736 84 YHLRHLIIA 92 (104)
Q Consensus 84 ~~~~a~~~~ 92 (104)
++++++++.
T Consensus 96 ~~~~a~~~~ 104 (272)
T 3u4t_A 96 QYQAAVDRD 104 (272)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhcC
Confidence 777777653
No 119
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.68 E-value=7.3e-08 Score=57.79 Aligned_cols=91 Identities=20% Similarity=0.162 Sum_probs=67.9
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHH-----HHHHHHHHHHHHHhCCh
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVE-----AQACYSLGNTYTLLRDY 78 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-----~~~~~~l~~~~~~~g~~ 78 (104)
+++|+..++.. ...+....++..+|.++...|++++|+.++++++.+.....++... ..++..+|.++...|++
T Consensus 267 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 346 (368)
T 1fch_A 267 SEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 346 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCCh
Confidence 44555544432 1112335678999999999999999999999999987665433222 57889999999999999
Q ss_pred hHHHHHHHHHHHHHHHh
Q psy10736 79 PTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 79 ~~A~~~~~~a~~~~~~~ 95 (104)
++|...++++++.+++.
T Consensus 347 ~~A~~~~~~~l~~~~~~ 363 (368)
T 1fch_A 347 DAYGAADARDLSTLLTM 363 (368)
T ss_dssp GGHHHHHTTCHHHHHHH
T ss_pred HhHHHhHHHHHHHHHHh
Confidence 99999999999887654
No 120
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.67 E-value=4.2e-07 Score=53.98 Aligned_cols=71 Identities=11% Similarity=-0.033 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
++.....++..+|.++...|++++|+.++++++... . ....++..+|.++...|++++|+.+|++++++.+
T Consensus 267 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p 337 (359)
T 3ieg_A 267 VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME---P---DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNE 337 (359)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---T---TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC---c---ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 455566778899999999999999999999998762 1 1246788999999999999999999999997754
No 121
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.66 E-value=3.4e-07 Score=57.24 Aligned_cols=63 Identities=8% Similarity=0.023 Sum_probs=55.3
Q ss_pred HHhccHHHHHHHHHHHHHHHHHh-C-ChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 33 IFLGEYQAASEHYKRTLVLAQDL-G-DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 33 ~~~~~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
...|++++|+..+++++++..+. | +.+..+.++.++|.+|..+|+|++|+.++++++++.++.
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~ 373 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKH 373 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999998764 3 456778999999999999999999999999999998865
No 122
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.66 E-value=2.5e-07 Score=47.76 Aligned_cols=68 Identities=21% Similarity=0.219 Sum_probs=56.1
Q ss_pred HHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 24 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 24 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.+..+|..+...|++++|+..+++++.... +......++..+|.++...|++++|+.++++++.....
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p---~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~ 71 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYP---NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT 71 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCS---SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCC---CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC
Confidence 467889999999999999999999876532 22223468899999999999999999999999986543
No 123
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.66 E-value=9.8e-08 Score=62.44 Aligned_cols=69 Identities=12% Similarity=-0.039 Sum_probs=55.6
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+....++..+|.++...|++++|+..++++++... . ...+++++|.++...|++++|+..|++++++..
T Consensus 430 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p--~----~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 498 (681)
T 2pzi_A 430 SESVELPLMEVRALLDLGDVAKATRKLDDLAERVG--W----RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFP 498 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC--C----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCc--c----hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 44556788889999999999999999999887521 1 246788999999999999999999999987654
No 124
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.66 E-value=8.7e-08 Score=60.21 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=65.7
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHh--------ccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFL--------GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL 75 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~--------~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 75 (104)
+++|+..+++. ...+....++.++|.++... |++++|+.++++++.+... ......++.++|.++...
T Consensus 195 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~~~~lg~~~~~~ 271 (474)
T 4abn_A 195 VMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK---ASSNPDLHLNRATLHKYE 271 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG---GGGCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC---cccCHHHHHHHHHHHHHc
Confidence 44555555432 11123356789999999999 9999999999999987221 013457899999999999
Q ss_pred CChhHHHHHHHHHHHHHHH
Q psy10736 76 RDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 76 g~~~~A~~~~~~a~~~~~~ 94 (104)
|++++|+..|++++++...
T Consensus 272 g~~~~A~~~~~~al~l~p~ 290 (474)
T 4abn_A 272 ESYGEALEGFSQAAALDPA 290 (474)
T ss_dssp TCHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHhCCC
Confidence 9999999999999987543
No 125
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.65 E-value=1.8e-07 Score=59.74 Aligned_cols=66 Identities=14% Similarity=-0.002 Sum_probs=41.2
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
...++.++|.++...|++++|+.+++++++... ....++.++|.++...|++++|+.++++++++.
T Consensus 56 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 56 HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAP------EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 345566666666666666666666666665421 113456667777777777777777777766553
No 126
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=5e-07 Score=47.47 Aligned_cols=70 Identities=19% Similarity=0.132 Sum_probs=59.0
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.....+..+|..+...|++++|+.++++++... .+......++.++|.++...|++++|+.++++++.+.
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~---~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLD---ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD 95 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc---ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 346678899999999999999999999987652 2333346889999999999999999999999999764
No 127
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.65 E-value=7.3e-07 Score=50.16 Aligned_cols=65 Identities=22% Similarity=0.214 Sum_probs=53.9
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHH----------------HHHHHHHhCChhHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYS----------------LGNTYTLLRDYPTAIDYHL 86 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~----------------l~~~~~~~g~~~~A~~~~~ 86 (104)
..+...|..+...|++++|+.++++++..... ...++.. +|.++...|++++|+..|+
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNID------RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH------HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC------ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 45677889999999999999999999887332 2334555 9999999999999999999
Q ss_pred HHHHHHH
Q psy10736 87 RHLIIAQ 93 (104)
Q Consensus 87 ~a~~~~~ 93 (104)
+++++.+
T Consensus 79 ~al~~~p 85 (208)
T 3urz_A 79 ELLQKAP 85 (208)
T ss_dssp HHHHHCT
T ss_pred HHHHHCC
Confidence 9998754
No 128
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.65 E-value=8.8e-08 Score=49.48 Aligned_cols=69 Identities=19% Similarity=0.241 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.+.....+..+|..+...|++++|+.++++++.... ....++.++|.++...|++++|+.++++++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 80 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNP------KDAKLYSNRAACYTKLLEFQLALKDCEECIQLE 80 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCT------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC------CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 345577889999999999999999999999886521 124678999999999999999999999999764
No 129
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.64 E-value=2.9e-07 Score=51.45 Aligned_cols=83 Identities=19% Similarity=0.123 Sum_probs=52.2
Q ss_pred hhHHHHHHHHh-C--CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHH
Q psy10736 5 PNDRLKIAREF-G--DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 81 (104)
Q Consensus 5 ~~~a~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 81 (104)
+++|+..++.. . ..+....++..+|.++...|++++|+.++++++..... ...++..+|.++...|++++|
T Consensus 93 ~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A 166 (225)
T 2vq2_A 93 PAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ------FPPAFKELARTKMLAGQLGDA 166 (225)
T ss_dssp HHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CchHHHHHHHHHHHcCCHHHH
Confidence 44455444332 1 23334556677777777777777777777777654211 134567777777778888888
Q ss_pred HHHHHHHHHHHH
Q psy10736 82 IDYHLRHLIIAQ 93 (104)
Q Consensus 82 ~~~~~~a~~~~~ 93 (104)
+..++++++...
T Consensus 167 ~~~~~~~~~~~~ 178 (225)
T 2vq2_A 167 DYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhCC
Confidence 888877776543
No 130
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.63 E-value=8.2e-08 Score=48.09 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=55.8
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.++..+|.++...|++++|+.++++++.... + ...++.++|.++...|++++|+.++++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~---~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDP---E---ESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCC---C---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCc---C---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4567889999999999999999999987621 1 1357889999999999999999999999998543
No 131
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.62 E-value=2.1e-08 Score=59.16 Aligned_cols=67 Identities=24% Similarity=0.324 Sum_probs=57.4
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
....++..+|.++...|++++|+.++++++..... ...++.++|.++...|++++|+.++++++++.
T Consensus 234 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 300 (330)
T 3hym_B 234 KWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ------NASTYSAIGYIHSLMGNFENAVDYFHTALGLR 300 (330)
T ss_dssp TCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc------chHHHHHHHHHHHHhccHHHHHHHHHHHHccC
Confidence 34568899999999999999999999999876322 24678899999999999999999999998654
No 132
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.61 E-value=1.9e-07 Score=59.34 Aligned_cols=67 Identities=22% Similarity=0.202 Sum_probs=58.1
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
..++..+|.++...|++++|+..++++++.. .. ...++..+|.+|...|++++|+.++++++++.+.
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--p~----~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~ 582 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLS--TN----DANVHTAIALVYLHKKIPGLAITHLHESLAISPN 582 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--SC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CC----ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 7789999999999999999999999988763 11 2367899999999999999999999999987543
No 133
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.61 E-value=3.3e-07 Score=52.33 Aligned_cols=64 Identities=19% Similarity=0.245 Sum_probs=32.4
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
....++..+|.++...|++++|+.++++++.... . ...++..+|.++...|++++|+.++++++
T Consensus 139 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~--~----~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 202 (252)
T 2ho1_A 139 ERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNR--N----QPSVALEMADLLYKEREYVPARQYYDLFA 202 (252)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS--C----CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc--c----cHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3444555555555555555555555555544311 0 12334455555555555555555555544
No 134
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.60 E-value=3.2e-07 Score=52.88 Aligned_cols=83 Identities=16% Similarity=-0.041 Sum_probs=63.3
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..+++.- ..+....++..+|.++...|++++|+.++++++..... ...++..+|.++...|++++|+.
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~la~~~~~~g~~~~A~~ 132 (275)
T 1xnf_A 59 RALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT------YNYAHLNRGIALYYGGRDKLAQD 132 (275)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc------ccHHHHHHHHHHHHhccHHHHHH
Confidence 445555444321 11123567899999999999999999999999886321 23678899999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
++++++++.+
T Consensus 133 ~~~~a~~~~~ 142 (275)
T 1xnf_A 133 DLLAFYQDDP 142 (275)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHhCC
Confidence 9999997644
No 135
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.60 E-value=3.9e-07 Score=49.32 Aligned_cols=63 Identities=17% Similarity=0.165 Sum_probs=37.8
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
.++..+|.++...|++++|+.++++++..... ...++..+|.++...|++++|+.+++++++.
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPI------NFNVRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH------hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 44555666666666666666666665544111 1245566677777777777777777766654
No 136
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.58 E-value=1e-07 Score=56.10 Aligned_cols=67 Identities=18% Similarity=0.236 Sum_probs=41.3
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
..++..+|.++...|++++|+.++++++.... ....++..+|.++...|++++|+.++++++.+.+.
T Consensus 206 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 206 AQLWNKLGATLANGNRPQEALDAYNRALDINP------GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 34566666666666777777766666655421 11235566666666666666666666666666655
No 137
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.58 E-value=6.6e-07 Score=50.84 Aligned_cols=71 Identities=13% Similarity=-0.016 Sum_probs=57.7
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
...++.+|..+...|++++|+..+++++..... ......++..+|.++...|++++|+..|+++++..+..
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~ 74 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF---GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 74 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC
Confidence 346788999999999999999999998765322 22234688999999999999999999999999776543
No 138
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.58 E-value=3e-09 Score=53.71 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=61.5
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+.+|+..+++. ...+....++.++|.++...|++++|+.++++++.+....++......++..+|.++...|+++.|+.
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 99 (111)
T 2l6j_A 20 YREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVV 99 (111)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSS
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHh
Confidence 45566554432 11122356789999999999999999999999998766555555567889999999999998887766
Q ss_pred HHH
Q psy10736 84 YHL 86 (104)
Q Consensus 84 ~~~ 86 (104)
.++
T Consensus 100 ~~~ 102 (111)
T 2l6j_A 100 EVD 102 (111)
T ss_dssp SSS
T ss_pred HHH
Confidence 543
No 139
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.58 E-value=2.7e-07 Score=53.54 Aligned_cols=60 Identities=22% Similarity=0.232 Sum_probs=31.8
Q ss_pred HHHHHhHHHHHH----hccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LRDYPTAIDYHLRHLI 90 (104)
Q Consensus 23 ~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~ 90 (104)
.++.++|.++.. .+++++|+.+++++++. + ...++.++|.++.. .+++++|+.+|+++++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 106 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL----N----YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 106 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----T----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC----C----CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHH
Confidence 345556666666 66666666666665543 1 12344555555555 5555555555555543
No 140
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.57 E-value=8.4e-07 Score=54.57 Aligned_cols=70 Identities=11% Similarity=-0.033 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
++.....++..+|.++...|++++|+.++++++... +....++..+|.++...|++++|+..+++++++.
T Consensus 290 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~------p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 359 (450)
T 2y4t_A 290 IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME------PDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 359 (450)
T ss_dssp SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS
T ss_pred chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC------cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 445557789999999999999999999999988762 1123678899999999999999999999998753
No 141
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.57 E-value=4.6e-07 Score=51.76 Aligned_cols=62 Identities=19% Similarity=0.141 Sum_probs=30.5
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
.++..+|.++...|++++|+.++++++.... ....++..+|.++...|++++|+.++++++.
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDS------RNARVLNNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc------CcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3444555555555555555555555444311 0123445555555555555555555555544
No 142
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.56 E-value=2.1e-07 Score=50.77 Aligned_cols=63 Identities=14% Similarity=0.135 Sum_probs=33.2
Q ss_pred HHHHhHHH-HHHhccH--HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 24 ANSNLGNS-HIFLGEY--QAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 24 ~~~~l~~~-~~~~~~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
++..+|.+ +...|++ ++|+.++++++.... ....++.++|.++...|++++|+.++++++++.
T Consensus 80 ~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 80 LYAALATVLYYQASQHMTAQTRAMIDKALALDS------NEITALMLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 34444444 4444544 555555555444311 112345566666666666666666666666543
No 143
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.56 E-value=5.2e-07 Score=47.88 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=53.3
Q ss_pred HHHHHHHhHHHHHH----hccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LRDYPTAIDYHLRHLII 91 (104)
Q Consensus 21 ~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~ 91 (104)
...+++++|.+|.. .+++++|+.+++++.+. ++ ..++.++|.+|.. .+++++|+.+|+++.+.
T Consensus 56 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 56 SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL----ND----QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC----CC----HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 35678999999988 78999999999998753 43 3578999999999 89999999999999865
No 144
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.55 E-value=2.5e-06 Score=50.59 Aligned_cols=85 Identities=13% Similarity=0.026 Sum_probs=61.6
Q ss_pred hhHHHHHHHHhC---CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHH
Q psy10736 5 PNDRLKIAREFG---DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 81 (104)
Q Consensus 5 ~~~a~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 81 (104)
+.+++..++... ++.....++.++|.++...|++++|++++++++.. ..+|.....+.+++|.++..+|+.++|
T Consensus 151 ~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g---~~~P~~~~da~~~~glaL~~lGr~deA 227 (282)
T 4f3v_A 151 WTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDS---PAGEACARAIAWYLAMARRSQGNESAA 227 (282)
T ss_dssp HHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS---TTTTTTHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcC---CCCccccHHHHHHHHHHHHHcCCHHHH
Confidence 445555554332 33334568899999999999999999999987621 111322456888999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 82 IDYHLRHLIIA 92 (104)
Q Consensus 82 ~~~~~~a~~~~ 92 (104)
...|++++...
T Consensus 228 ~~~l~~a~a~~ 238 (282)
T 4f3v_A 228 VALLEWLQTTH 238 (282)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhcC
Confidence 99999988653
No 145
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.55 E-value=1.7e-07 Score=59.88 Aligned_cols=83 Identities=17% Similarity=0.054 Sum_probs=58.8
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....++..+|.++...|++++|+++++++++... ....++.++|.++...|++++|+.
T Consensus 5 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~ 78 (568)
T 2vsy_A 5 GPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHP------GHPEAVARLGRVRWTQQRHAEAAV 78 (568)
T ss_dssp ----------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTST------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHCCCHHHHHH
Confidence 34555544433 23344567899999999999999999999999987622 224678999999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
++++++++..
T Consensus 79 ~~~~al~~~p 88 (568)
T 2vsy_A 79 LLQQASDAAP 88 (568)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHhcCC
Confidence 9999998743
No 146
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.55 E-value=5.2e-07 Score=50.40 Aligned_cols=80 Identities=11% Similarity=0.023 Sum_probs=52.1
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-CChhHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL-RDYPTAI 82 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~ 82 (104)
+++|+..++..- ..+....++..+|.++...|++++|+.++++++.... ....++..+|.++... |++++|+
T Consensus 24 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~~A~ 97 (225)
T 2vq2_A 24 YRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKP------DSAEINNNYGWFLCGRLNRPAESM 97 (225)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHhcCcHHHHH
Confidence 345555444321 1123355677778888888888888888887766521 1134667778888888 8888888
Q ss_pred HHHHHHHH
Q psy10736 83 DYHLRHLI 90 (104)
Q Consensus 83 ~~~~~a~~ 90 (104)
.+++++++
T Consensus 98 ~~~~~~~~ 105 (225)
T 2vq2_A 98 AYFDKALA 105 (225)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 88888776
No 147
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.54 E-value=1e-07 Score=59.90 Aligned_cols=69 Identities=19% Similarity=0.122 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhHHHHHHhccH-HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEY-QAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.+....++..+|.++...|++ ++|+.++++++.+.. ....++.++|.+|...|++++|+.+|++++++.
T Consensus 98 ~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~ 167 (474)
T 4abn_A 98 AQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEP------ELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHC 167 (474)
T ss_dssp CCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred CchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 344678899999999999999 999999999987621 224688999999999999999999999998764
No 148
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.53 E-value=1.1e-06 Score=44.98 Aligned_cols=83 Identities=30% Similarity=0.410 Sum_probs=61.7
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..++..- ..+....++..+|.++...|++++|+.++++++.... + ...++..+|.++...|++++|+.
T Consensus 17 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---~---~~~~~~~l~~~~~~~~~~~~A~~ 90 (136)
T 2fo7_A 17 YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP---R---SAEAWYNLGNAYYKQGDYDEAIE 90 (136)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---T---CHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC---C---chHHHHHHHHHHHHhcCHHHHHH
Confidence 445555554432 2344567788889999999999999999999876521 1 13567889999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
.+++++....
T Consensus 91 ~~~~~~~~~~ 100 (136)
T 2fo7_A 91 YYQKALELDP 100 (136)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHhCC
Confidence 9999987643
No 149
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.53 E-value=3.5e-07 Score=53.83 Aligned_cols=83 Identities=19% Similarity=0.149 Sum_probs=63.1
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..++..- ..+....++..+|.++...|++++|+.++++++.... ....++..+|.++...|++++|+.
T Consensus 154 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~ 227 (327)
T 3cv0_A 154 YRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRP------DDAQLWNKLGATLANGNRPQEALD 227 (327)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcCCHHHHHH
Confidence 345555444321 1122356789999999999999999999999987621 123678899999999999999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
.+++++++.+
T Consensus 228 ~~~~a~~~~~ 237 (327)
T 3cv0_A 228 AYNRALDINP 237 (327)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHcCC
Confidence 9999987643
No 150
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.52 E-value=2.9e-07 Score=54.19 Aligned_cols=64 Identities=17% Similarity=0.153 Sum_probs=55.5
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
+..+..+|..+...|++++|+.++.+++.... ....++.++|.++...|++++|+..+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP------LVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999987621 12467899999999999999999999999865
No 151
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.52 E-value=6.7e-07 Score=50.61 Aligned_cols=62 Identities=21% Similarity=0.316 Sum_probs=27.4
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
.++..+|.++...|++++|+.++++++..... + ..++..+|.++...|++++|+.+++++++
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 153 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAGME--N----GDLFYMLGTVLVKLEQPKLALPYLQRAVE 153 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC--S----HHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 33444455555555555555555544433110 0 12334444444444444444444444443
No 152
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.52 E-value=4.3e-07 Score=51.41 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 64 ACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 64 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
++..+|.++...|++++|+.++++++++
T Consensus 195 ~~~~la~~~~~~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 195 AFYNAGVTYAYKENREKALEMLDKAIDI 222 (243)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHcc
Confidence 4455555555555555555555555544
No 153
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.52 E-value=1e-06 Score=45.15 Aligned_cols=65 Identities=38% Similarity=0.550 Sum_probs=54.3
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
..++..+|.++...|++++|+.++++++..... ...++..+|.++...|++++|..++++++.+.
T Consensus 69 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 69 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR------SAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 133 (136)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHHccHHHHHHHHHHHHccC
Confidence 456788999999999999999999998875321 13567889999999999999999999998653
No 154
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.51 E-value=3.5e-07 Score=55.45 Aligned_cols=65 Identities=28% Similarity=0.244 Sum_probs=40.9
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
...++..+|.++...|++++|+.++++++.+.. ....++.++|.++...|++++|+..|++++++
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 130 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKP------DFIDGYINLAAALVAAGDMEGAVQAYVSALQY 130 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCc------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 345677777888888888888888887766411 11234556666666666666666666655543
No 155
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.51 E-value=6.7e-07 Score=50.82 Aligned_cols=87 Identities=9% Similarity=-0.076 Sum_probs=64.1
Q ss_pred hhHHHHHHHHh----CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH------
Q psy10736 5 PNDRLKIAREF----GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL------ 74 (104)
Q Consensus 5 ~~~a~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~------ 74 (104)
+++|+..++.. ++.+....++..+|.++...|++++|+..+++++....... ....++..+|.++..
T Consensus 20 ~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~---~~~~a~~~~g~~~~~~~~~~~ 96 (225)
T 2yhc_A 20 WRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHP---NIDYVMYMRGLTNMALDDSAL 96 (225)
T ss_dssp HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---THHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC---cHHHHHHHHHHHHHhhhhhhh
Confidence 55666655543 23344567899999999999999999999999887644322 233567788888765
Q ss_pred ------------hCChhHHHHHHHHHHHHHHH
Q psy10736 75 ------------LRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 75 ------------~g~~~~A~~~~~~a~~~~~~ 94 (104)
.|++++|+..|+++++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~ 128 (225)
T 2yhc_A 97 QGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN 128 (225)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTCTT
T ss_pred hhhhccchhhcCcHHHHHHHHHHHHHHHHCcC
Confidence 57899999999998876543
No 156
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.50 E-value=3.2e-07 Score=57.55 Aligned_cols=87 Identities=11% Similarity=0.015 Sum_probs=62.5
Q ss_pred hhHHHHHHHHhCCHHHHHHHHHHhHHHHHHh----------ccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10736 5 PNDRLKIAREFGDKAAERRANSNLGNSHIFL----------GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL 74 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 74 (104)
+++++...............+..+|.++... |++++|+.++++++.... ....++..+|.++..
T Consensus 401 ~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p------~~~~~~~~l~~~~~~ 474 (537)
T 3fp2_A 401 YDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDP------RSEQAKIGLAQLKLQ 474 (537)
T ss_dssp HHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHH
Confidence 3344444333333333334466778888888 999999999999987622 123678999999999
Q ss_pred hCChhHHHHHHHHHHHHHHHhcc
Q psy10736 75 LRDYPTAIDYHLRHLIIAQQLMD 97 (104)
Q Consensus 75 ~g~~~~A~~~~~~a~~~~~~~~~ 97 (104)
.|++++|+.+|++++++.+..++
T Consensus 475 ~g~~~~A~~~~~~al~~~~~~~~ 497 (537)
T 3fp2_A 475 MEKIDEAIELFEDSAILARTMDE 497 (537)
T ss_dssp TTCHHHHHHHHHHHHHHC--CHH
T ss_pred hccHHHHHHHHHHHHHhCCCcHH
Confidence 99999999999999988765443
No 157
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.49 E-value=1.3e-06 Score=47.56 Aligned_cols=66 Identities=15% Similarity=0.218 Sum_probs=56.0
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH-HHHhCCh--hHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNT-YTLLRDY--PTAIDYHLRHLIIAQ 93 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~--~~A~~~~~~a~~~~~ 93 (104)
..++..+|.++...|++++|+.++++++.+... + ..++..+|.+ +...|++ ++|+..+++++++..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~--~----~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p 112 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE--N----AELYAALATVLYYQASQHMTAQTRAMIDKALALDS 112 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS--C----HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--C----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999876421 2 3577899999 8899998 999999999997643
No 158
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.49 E-value=4.3e-07 Score=56.54 Aligned_cols=82 Identities=13% Similarity=0.033 Sum_probs=61.1
Q ss_pred hhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHH
Q psy10736 5 PNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDY 84 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 84 (104)
+.+|+..++..-.......++..+|.++...|++++|+..+++++... +....++..+|.++...|++++|+..
T Consensus 22 ~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~g~~~~A~~~ 95 (514)
T 2gw1_A 22 YDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELK------PDYSKVLLRRASANEGLGKFADAMFD 95 (514)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------SCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccC------hHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 455555554331100125678999999999999999999999988752 11236788999999999999999999
Q ss_pred HHHHHHHH
Q psy10736 85 HLRHLIIA 92 (104)
Q Consensus 85 ~~~a~~~~ 92 (104)
|++++.+.
T Consensus 96 ~~~~~~~~ 103 (514)
T 2gw1_A 96 LSVLSLNG 103 (514)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhcC
Confidence 99987654
No 159
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.47 E-value=1.9e-06 Score=54.85 Aligned_cols=70 Identities=24% Similarity=0.323 Sum_probs=52.6
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD-RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.++..++.++...|++++|+++++++++.....+. +.....++..+|.++...|++++|+..+++++++.
T Consensus 476 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 546 (597)
T 2xpi_A 476 LLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS 546 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 45777888888888888888888888877666443 33235677888888888888888888888887653
No 160
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.47 E-value=7.3e-07 Score=52.77 Aligned_cols=65 Identities=14% Similarity=0.035 Sum_probs=40.3
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhH-HHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPT-AIDYHLRHLIIA 92 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-A~~~~~~a~~~~ 92 (104)
..+++++|.++...|++++|+..+++++... +.-..++.++|.++...|++.+ +..++++++++.
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al~~~------p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~ 265 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEALDKD------SGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAH 265 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 4456667777777777777777777766542 1112456677777777777655 456666666554
No 161
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.45 E-value=9.5e-07 Score=51.25 Aligned_cols=63 Identities=14% Similarity=0.304 Sum_probs=55.0
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LRDYPTAIDYHLRHLII 91 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~ 91 (104)
...++..+|..+...|++++|+.+++++++ .++ ..++.++|.++.. .+++++|+.+|++++++
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~----~~~----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 71 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACD----LKE----NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 71 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHH----CCC----HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC
Confidence 356789999999999999999999999887 333 2578999999999 99999999999999865
No 162
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.45 E-value=1.5e-06 Score=43.24 Aligned_cols=65 Identities=15% Similarity=0.092 Sum_probs=52.5
Q ss_pred HHHHHhHHHHHHhcc---HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGE---YQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
..+..+|.++...++ .++|...+++++.+ .+.-..++..+|..++..|++++|+.+|++.++...
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQL------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 456677777776655 79999999999886 233457889999999999999999999999886543
No 163
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.44 E-value=2.3e-07 Score=57.79 Aligned_cols=67 Identities=13% Similarity=0.049 Sum_probs=57.1
Q ss_pred HHHHHhHHHHHH---hccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 23 RANSNLGNSHIF---LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 23 ~~~~~l~~~~~~---~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
.++..+|.++.. .|++++|+.++++++.... ....++..+|.++...|++++|..++++++++.+..
T Consensus 413 ~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 413 APLVGKATLLTRNPTVENFIEATNLLEKASKLDP------RSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTM 482 (514)
T ss_dssp HHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSH
T ss_pred HHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcccc
Confidence 378999999999 9999999999999987621 123678899999999999999999999999876543
No 164
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.43 E-value=1.9e-06 Score=53.81 Aligned_cols=69 Identities=6% Similarity=-0.109 Sum_probs=57.6
Q ss_pred HhHHHHHHhccHHHHHHHHHHHHHHHHHh-C-ChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 27 NLGNSHIFLGEYQAASEHYKRTLVLAQDL-G-DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 27 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
....-+...|++++|+..+++++++..+. + +.+..+.++.++|.+|..+|+|++|+.++++++++.++.
T Consensus 292 ~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 292 KKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHH
Confidence 33445667889999999999999876543 3 356678999999999999999999999999999998865
No 165
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.42 E-value=7.6e-07 Score=53.99 Aligned_cols=64 Identities=20% Similarity=0.131 Sum_probs=39.2
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..++.++|.++...|++++|+..+++++.... ....++.++|.++...|++++|+..+++++++
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 300 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQP------HFPDAYCNLANALKEKGSVAEAEDCYNTALRL 300 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCS------SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34556666667777777777777666655311 11234566666666677777777766666654
No 166
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.42 E-value=2.2e-07 Score=60.79 Aligned_cols=79 Identities=11% Similarity=0.083 Sum_probs=47.8
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+++|+..+++. ...+....+++++|.++...|++++|+..|++++.+.... ..++.++|.++...|++++ +.
T Consensus 449 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~------~~~~~~lg~~~~~~g~~~~-~~ 521 (681)
T 2pzi_A 449 VAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGE------LAPKLALAATAELAGNTDE-HK 521 (681)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC------SHHHHHHHHHHHHHTCCCT-TC
T ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHcCChHH-HH
Confidence 44555544332 1223345678999999999999999999999988763211 2334445555555555555 55
Q ss_pred HHHHHHH
Q psy10736 84 YHLRHLI 90 (104)
Q Consensus 84 ~~~~a~~ 90 (104)
+|+++++
T Consensus 522 ~~~~al~ 528 (681)
T 2pzi_A 522 FYQTVWS 528 (681)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544443
No 167
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.42 E-value=1.5e-06 Score=47.52 Aligned_cols=66 Identities=12% Similarity=-0.002 Sum_probs=53.0
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..++.++|.++...|++++|+..+++++....... ...++.++|.++...|+.++|+..|++++..
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~----~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKVNLGAQ----DGEVKKTFMDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT----TTHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC----hHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 56788899999999999999999998876532211 1346788999999999999999999988753
No 168
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.41 E-value=2.4e-06 Score=50.70 Aligned_cols=84 Identities=15% Similarity=0.044 Sum_probs=64.8
Q ss_pred chhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 4 QPNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 4 ~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
-+++|+..++.. ...+....++..+|.++...|++++|+.++++++... +....++..+|.++...|++++|+
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~A~ 91 (359)
T 3ieg_A 18 QLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK------MDFTAARLQRGHLLLKQGKLDEAE 91 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCcchHHHHHHHHHHHcCChHHHH
Confidence 356666666544 3456668889999999999999999999999988762 112367889999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10736 83 DYHLRHLIIAQ 93 (104)
Q Consensus 83 ~~~~~a~~~~~ 93 (104)
..+++++++.+
T Consensus 92 ~~~~~~~~~~~ 102 (359)
T 3ieg_A 92 DDFKKVLKSNP 102 (359)
T ss_dssp HHHHHHHTSCC
T ss_pred HHHHHHHhcCC
Confidence 99999887644
No 169
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.41 E-value=1.1e-06 Score=49.61 Aligned_cols=82 Identities=13% Similarity=0.059 Sum_probs=49.8
Q ss_pred hhHHHHHHHHhCCHHHHHHHHHHhHHHHHH----hccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hC
Q psy10736 5 PNDRLKIAREFGDKAAERRANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LR 76 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g 76 (104)
+.+|+.++++.- ......++.++|.+|.. .+++++|+.+++++.+. ++......++.++|.+|.. .+
T Consensus 69 ~~~A~~~~~~A~-~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~----~~~~~~~~a~~~Lg~~y~~g~g~~~ 143 (212)
T 3rjv_A 69 YPQARQLAEKAV-EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD----SESDAAVDAQMLLGLIYASGVHGPE 143 (212)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS----TTSHHHHHHHHHHHHHHHHTSSSSC
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc----CCCcchHHHHHHHHHHHHcCCCCCC
Confidence 445555444331 11234456666666665 56677777777666542 2211235677788888877 77
Q ss_pred ChhHHHHHHHHHHHH
Q psy10736 77 DYPTAIDYHLRHLII 91 (104)
Q Consensus 77 ~~~~A~~~~~~a~~~ 91 (104)
++++|+.+|+++.++
T Consensus 144 d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 144 DDVKASEYFKGSSSL 158 (212)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHc
Confidence 788888888887754
No 170
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.41 E-value=2e-06 Score=52.91 Aligned_cols=64 Identities=16% Similarity=0.029 Sum_probs=43.2
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..++..+|.++...|++++|+..+++++.... ....++..+|.++...|++++|+..|++++++
T Consensus 60 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 123 (450)
T 2y4t_A 60 YIAYYRRATVFLAMGKSKAALPDLTKVIQLKM------DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS 123 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 55666777777777777777777777665421 12356677777777777777777777777654
No 171
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.38 E-value=4.4e-07 Score=46.49 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=43.7
Q ss_pred HhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 34 FLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 34 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
..|++++|+.++++++... .+.+....++.++|.++...|++++|+.++++++++.+.
T Consensus 2 ~~g~~~~A~~~~~~al~~~---~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 59 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASG---LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN 59 (117)
T ss_dssp -----CCCHHHHHHHHSSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCCcHHHHHHHHHHHHHcC---CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 4688999999999998751 112345688999999999999999999999999987443
No 172
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.37 E-value=1.6e-06 Score=52.31 Aligned_cols=75 Identities=17% Similarity=0.096 Sum_probs=59.4
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC-----------hHHHHHHHHHHHHHHHHhCChhHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD-----------RAVEAQACYSLGNTYTLLRDYPTAIDYHLR 87 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 87 (104)
...+..+..+|..+...|++++|+.+|.+++.+...... ......++.++|.++...|++++|+.+|++
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445677899999999999999999999999986432110 000113789999999999999999999999
Q ss_pred HHHHHH
Q psy10736 88 HLIIAQ 93 (104)
Q Consensus 88 a~~~~~ 93 (104)
++++..
T Consensus 256 al~~~p 261 (338)
T 2if4_A 256 VLTEEE 261 (338)
T ss_dssp HHHHCT
T ss_pred HHHhCC
Confidence 997643
No 173
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.36 E-value=8.4e-06 Score=45.99 Aligned_cols=81 Identities=16% Similarity=0.084 Sum_probs=63.3
Q ss_pred chhHHHHHHHHhCCHH---HHHHHHHHhHHHHHH----hccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-
Q psy10736 4 QPNDRLKIAREFGDKA---AERRANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL- 75 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~- 75 (104)
-+.+|+.++++.-... ....+++++|.+|.. .+++++|+.+++++.+. .+++ .++.++|.+|..-
T Consensus 104 d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~---~~~~----~a~~~Lg~~y~~g~ 176 (212)
T 3rjv_A 104 DVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL---SRTG----YAEYWAGMMFQQGE 176 (212)
T ss_dssp CHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT---SCTT----HHHHHHHHHHHHCB
T ss_pred CHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc---CCCH----HHHHHHHHHHHcCC
Confidence 4667787777654322 357889999999999 78999999999998754 2332 3689999999764
Q ss_pred C-----ChhHHHHHHHHHHHH
Q psy10736 76 R-----DYPTAIDYHLRHLII 91 (104)
Q Consensus 76 g-----~~~~A~~~~~~a~~~ 91 (104)
| ++++|+.+|+++.+.
T Consensus 177 gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 177 KGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp TTTBCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHc
Confidence 3 899999999999876
No 174
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.35 E-value=1.7e-06 Score=54.31 Aligned_cols=63 Identities=17% Similarity=0.217 Sum_probs=28.3
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
+..+..+|..+...|++++|+.++++++.... ....++.++|.++...|++++|+..++++++
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 87 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDP------NEPVFYSNISACYISTGDLEKVIEFTTKALE 87 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCC------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 34444455555555555555555555443310 0123444444455555555555555544444
No 175
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.30 E-value=7e-05 Score=46.43 Aligned_cols=98 Identities=14% Similarity=0.036 Sum_probs=84.2
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
.+.+++++++...-.+.....-..+|..|...|++.+|...+.+.+.-+++.++......++.....+|...+++.++..
T Consensus 81 ~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~ 160 (394)
T 3txn_A 81 LCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARA 160 (394)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHH
Confidence 35677888887777777777888999999999999999999999999998888888888999999999999999999999
Q ss_pred HHHHHHHHHHHh-cchhhc
Q psy10736 84 YHLRHLIIAQQL-MDRVGE 101 (104)
Q Consensus 84 ~~~~a~~~~~~~-~~~~~~ 101 (104)
.+.++....... .+|..+
T Consensus 161 ~l~~a~~~~~ai~~~p~i~ 179 (394)
T 3txn_A 161 ALTSARTTANAIYCPPKVQ 179 (394)
T ss_dssp HHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHhhhccCCCCHHHH
Confidence 999999888765 555443
No 176
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.28 E-value=3.3e-06 Score=50.08 Aligned_cols=81 Identities=9% Similarity=-0.086 Sum_probs=62.7
Q ss_pred chhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 4 QPNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 4 ~~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
-|++|.+.+.... ..+... ..+.+|.++...+++++|+.+++++... .++.....+++++|.++...|++++|+
T Consensus 117 ~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~----~d~~~~~~a~~~LG~al~~LG~~~eAl 191 (282)
T 4f3v_A 117 NYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKW----PDKFLAGAAGVAHGVAAANLALFTEAE 191 (282)
T ss_dssp CHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGC----SCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhcc----CCcccHHHHHHHHHHHHHHCCCHHHHH
Confidence 3567777665542 223344 8899999999999999999999865332 244444578999999999999999999
Q ss_pred HHHHHHH
Q psy10736 83 DYHLRHL 89 (104)
Q Consensus 83 ~~~~~a~ 89 (104)
.+|++++
T Consensus 192 ~~l~~a~ 198 (282)
T 4f3v_A 192 RRLTEAN 198 (282)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999987
No 177
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.28 E-value=1.5e-07 Score=59.32 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=56.8
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
..+..+..+|..+...|++++|++++++++++.. ....++.++|.++..+|++++|+.++++++++.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 70 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNP------SNAIYYGNRSLAYLRTECYGYALGDATRAIELD 70 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 3455677888899999999999999999998721 225788999999999999999999999999763
No 178
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.21 E-value=4.1e-05 Score=41.42 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=54.3
Q ss_pred HHHHHHHhHHHHHHhc---cHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLG---EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
...+..++|.++...+ +..+++..++..+.. .+|...-.+++++|..+...|+|.+|..++++++++-
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~----~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ie 101 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK----GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 101 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 3566778888888877 677999988886653 2243456789999999999999999999999998763
No 179
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.20 E-value=7.7e-06 Score=51.37 Aligned_cols=63 Identities=25% Similarity=0.245 Sum_probs=48.2
Q ss_pred HHHHHHhHHHHHH----hccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 22 ~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~ 92 (104)
..+++++|.+|.. .+++++|+.+++++.+. ++ ..++.++|.+|.. .+++++|..+|+++++..
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~----~~----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ----GL----SAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 4567777888777 67888888888887652 22 3577888888887 788899999998888775
No 180
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.19 E-value=1.8e-05 Score=46.80 Aligned_cols=31 Identities=6% Similarity=-0.181 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 63 QACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 63 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
.+++++|.++...|++++|+..+++++++.+
T Consensus 201 ~~~~~la~~~~~~g~~~eA~~~l~~al~~~p 231 (291)
T 3mkr_A 201 LLLNGQAACHMAQGRWEAAEGVLQEALDKDS 231 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4678899999999999999999999997643
No 181
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.18 E-value=1.2e-06 Score=47.89 Aligned_cols=57 Identities=9% Similarity=-0.056 Sum_probs=26.2
Q ss_pred HHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 26 SNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 26 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
..+|..+...|++++|+..+++++.... ....++..+|.++...|++++|+..++++
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~~P------~~~~a~~~la~~~~~~g~~~~A~~~~~~a 66 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDELQ------SRGDVKLAKADCLLETKQFELAQELLATI 66 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHHHH------TSHHHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCC------CcHHHHHHHHHHHHHCCCHHHHHHHHHHh
Confidence 3444444455555555555555444311 11234445555555555555555544443
No 182
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.13 E-value=2.2e-05 Score=46.27 Aligned_cols=66 Identities=14% Similarity=0.041 Sum_probs=48.4
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..++.++|.++...|++++|+..+.+++..-... ....++.+++.++...|+.++|...|++++..
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~----~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXDLTA----ADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG----GGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc----ccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 4567788888888888888888888877652221 12356778888888888888888888887754
No 183
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.09 E-value=2.1e-05 Score=41.61 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=48.4
Q ss_pred hHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHH
Q psy10736 28 LGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LRDYPTAIDYHLRHLII 91 (104)
Q Consensus 28 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~ 91 (104)
+|..|...+..++|+++++++.+. ++ ..+++++|.+|.. .+++++|+.+|+++.+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL----NS----GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC----CC----HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC
Confidence 888888888899999999998764 33 4688999999998 89999999999999754
No 184
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.09 E-value=5.7e-06 Score=48.76 Aligned_cols=64 Identities=13% Similarity=0.030 Sum_probs=52.9
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
....+..+|..+...|++++|+..+++++.... ....++.++|.++...|++++|+..+++++.
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P------~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSN------QNGEIGLLLAETLIALNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT------SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCG
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCC------cchhHHHHHHHHHHHCCCHHHHHHHHHhCch
Confidence 345678899999999999999999999887622 1246789999999999999999999988754
No 185
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.04 E-value=2.6e-05 Score=48.99 Aligned_cols=60 Identities=23% Similarity=0.216 Sum_probs=33.3
Q ss_pred HHHHHHhHHHHHH----hccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LRDYPTAIDYHLRHL 89 (104)
Q Consensus 22 ~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~ 89 (104)
..+++.+|..|.. .+++++|+.+++++.+. ++ ..++.++|.+|.. .+++++|+.+|+++.
T Consensus 75 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~ 142 (490)
T 2xm6_A 75 TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK----GL----PQAQQNLGVMYHEGNGVKVDKAESVKWFRLAA 142 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 3455666666666 66666666666665432 22 2344555555555 455555555555554
No 186
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.02 E-value=3.8e-05 Score=47.19 Aligned_cols=68 Identities=13% Similarity=0.024 Sum_probs=56.7
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+....++..++..+...|++++|+.++++++.+- .. ..++..+|.++...|++++|++.|++|+.+-.
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln----~s---~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE----MS---WLNYVLLGKVYEMKGMNREAADAYLTAFNLRP 341 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC----CC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC----CC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 4456677778888888899999999999999882 11 35678889999999999999999999998744
No 187
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.99 E-value=9.4e-06 Score=48.13 Aligned_cols=81 Identities=7% Similarity=-0.080 Sum_probs=53.8
Q ss_pred hHHHHHHHHh-C-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 6 NDRLKIAREF-G-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 6 ~~a~~~~~~~-~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
++|+..+++. . ..+....++..+|..+...|++++|...|++++.+.. .++. .++.++|.++...|++++|+.
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p--~~~~---~~~~~~~~~~~~~~~~~~A~~ 155 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED--IDPT---LVYIQYMKFARRAEGIKSGRM 155 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSS--SCTH---HHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccc--cCcc---HHHHHHHHHHHHhcCHHHHHH
Confidence 4555555433 2 2344556788888888888999999999988876421 1111 256677777777777777777
Q ss_pred HHHHHHHH
Q psy10736 84 YHLRHLII 91 (104)
Q Consensus 84 ~~~~a~~~ 91 (104)
.|++++++
T Consensus 156 ~~~~a~~~ 163 (308)
T 2ond_A 156 IFKKARED 163 (308)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHhc
Confidence 77777653
No 188
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.98 E-value=0.00038 Score=38.14 Aligned_cols=70 Identities=21% Similarity=0.228 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCCh-------------------HHHHHHHHHHHHHHHHhCCh
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDR-------------------AVEAQACYSLGNTYTLLRDY 78 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~-------------------~~~~~~~~~l~~~~~~~g~~ 78 (104)
+.....++..+|.++...++|..|..+|++++...+..... .......+.++.+|...+++
T Consensus 59 p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~ 138 (167)
T 3ffl_A 59 PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQD 138 (167)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCH
Confidence 67788899999999999999999999999999887632111 11235778999999999999
Q ss_pred hHHHHHHHH
Q psy10736 79 PTAIDYHLR 87 (104)
Q Consensus 79 ~~A~~~~~~ 87 (104)
.+|+..++.
T Consensus 139 ~~Ai~~Le~ 147 (167)
T 3ffl_A 139 KDAIAILDG 147 (167)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999988753
No 189
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.95 E-value=4.8e-05 Score=37.79 Aligned_cols=56 Identities=16% Similarity=0.177 Sum_probs=41.9
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHH
Q psy10736 5 PNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAV 60 (104)
Q Consensus 5 ~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 60 (104)
+++|+..+++. ...+....++..+|.++...|++++|+..+++++.+....++...
T Consensus 23 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 23 ASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhH
Confidence 45666555433 112233558899999999999999999999999999888777553
No 190
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=97.95 E-value=0.00032 Score=43.52 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=75.1
Q ss_pred HHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHH-HhCChhHHHHHHH
Q psy10736 9 LKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL-GDRAVEAQACYSLGNTYT-LLRDYPTAIDYHL 86 (104)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~ 86 (104)
+..+...+|......++......|...+++..+..++.++....... .+|...+.....-|..+. ..++|..|..+|-
T Consensus 126 ~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~ 205 (394)
T 3txn_A 126 LRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFY 205 (394)
T ss_dssp HHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHH
Confidence 34444456678889999999999999999999999999999988776 677778888888899999 8999999999998
Q ss_pred HHHHHHHHhcch
Q psy10736 87 RHLIIAQQLMDR 98 (104)
Q Consensus 87 ~a~~~~~~~~~~ 98 (104)
++.+-+...+.+
T Consensus 206 eaf~~f~~~~~~ 217 (394)
T 3txn_A 206 EAFEGFDSVDSV 217 (394)
T ss_dssp HHHHHHTTTCHH
T ss_pred HHHhcccccccH
Confidence 887666555544
No 191
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.94 E-value=0.00031 Score=38.47 Aligned_cols=78 Identities=10% Similarity=-0.036 Sum_probs=62.5
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD---RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
.+..+++..-.......+.|+.|+-....++.+.....+ +.....++..+|+.++..++|..|...|++++.+.+..
T Consensus 17 ~~~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 17 RGSHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp ----CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred CccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 344555666667778889999999999999888776554 56678899999999999999999999999999988854
Q ss_pred c
Q psy10736 96 M 96 (104)
Q Consensus 96 ~ 96 (104)
.
T Consensus 97 ~ 97 (167)
T 3ffl_A 97 S 97 (167)
T ss_dssp -
T ss_pred h
Confidence 3
No 192
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.94 E-value=9.6e-05 Score=44.10 Aligned_cols=80 Identities=11% Similarity=0.045 Sum_probs=62.6
Q ss_pred HHHHHhCCHHHHHHHHHHhHHHHHHh-----ccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH-hCChhHHHH
Q psy10736 10 KIAREFGDKAAERRANSNLGNSHIFL-----GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL-LRDYPTAID 83 (104)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~ 83 (104)
+.+-.+......+.++..+|..|... |+.++|..+|++++++.... ...+....|..+.. .|+++++..
T Consensus 187 erAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~-----~id~~v~YA~~l~~~~gd~~~a~~ 261 (301)
T 3u64_A 187 ERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH-----DPDHHITYADALCIPLNNRAGFDE 261 (301)
T ss_dssp HHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT-----CSHHHHHHHHHTTTTTTCHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC-----CchHHHHHHHHHHHhcCCHHHHHH
Confidence 33444566667888999999999995 99999999999999984321 13566778888877 599999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
++++++..-..
T Consensus 262 ~L~kAL~a~p~ 272 (301)
T 3u64_A 262 ALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHCCGG
T ss_pred HHHHHHcCCCC
Confidence 99999875443
No 193
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.93 E-value=3.3e-05 Score=37.12 Aligned_cols=66 Identities=26% Similarity=0.264 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR 76 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 76 (104)
+.+|+..+++.- ..+....++.++|.++...|++++|+.++++++.+.. ....++.++|.++...|
T Consensus 25 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p------~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 25 YDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------NNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHhcC
Confidence 445555444321 1122356788999999999999999999999987621 12356778888887654
No 194
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.91 E-value=3.6e-05 Score=48.19 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=44.2
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHH-H--HHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC----
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNS-H--IFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR---- 76 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~-~--~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g---- 76 (104)
-+.+|+.+++..- +....++.++|.+ + ...+++++|+.+++++.+. ++ ..+++++|.+|. .|
T Consensus 232 d~~~A~~~~~~aa--~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~----g~----~~A~~~Lg~~y~-~G~g~~ 300 (452)
T 3e4b_A 232 DEKTAQALLEKIA--PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA----DQ----PRAELLLGKLYY-EGKWVP 300 (452)
T ss_dssp CHHHHHHHHHHHG--GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHH-HCSSSC
T ss_pred CHHHHHHHHHHHc--CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHH-cCCCCC
Confidence 3456666666554 5556667777776 3 3456777777777776532 22 235556666655 44
Q ss_pred -ChhHHHHHHHHHH
Q psy10736 77 -DYPTAIDYHLRHL 89 (104)
Q Consensus 77 -~~~~A~~~~~~a~ 89 (104)
++++|+.+|+++.
T Consensus 301 ~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 301 ADAKAAEAHFEKAV 314 (452)
T ss_dssp CCHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHh
Confidence 5666666665554
No 195
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.80 E-value=0.00018 Score=51.16 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=59.3
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
.+++|++++++... ..+++.+|.++...|++++|++.|.++ +++ ..+..++.++...|++++|++
T Consensus 1091 nldrAiE~Aervn~----p~vWsqLAKAql~~G~~kEAIdsYiKA-------dD~----say~eVa~~~~~lGkyEEAIe 1155 (1630)
T 1xi4_A 1091 NLDRAYEFAERCNE----PAVWSQLAKAQLQKGMVKEAIDSYIKA-------DDP----SSYMEVVQAANTSGNWEELVK 1155 (1630)
T ss_pred hHHHHHHHHHhcCC----HHHHHHHHHHHHhCCCHHHHHHHHHhc-------CCh----HHHHHHHHHHHHcCCHHHHHH
Confidence 35667777776654 456789999999999999999999876 332 456779999999999999999
Q ss_pred HHHHHHHHH
Q psy10736 84 YHLRHLIIA 92 (104)
Q Consensus 84 ~~~~a~~~~ 92 (104)
+++.+.+..
T Consensus 1156 yL~mArk~~ 1164 (1630)
T 1xi4_A 1156 YLQMARKKA 1164 (1630)
T ss_pred HHHHHHhhc
Confidence 999887644
No 196
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.71 E-value=6.6e-06 Score=40.55 Aligned_cols=76 Identities=18% Similarity=0.232 Sum_probs=48.2
Q ss_pred hhHHHHHHHHhC-CHHHHHH-HHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHH
Q psy10736 5 PNDRLKIAREFG-DKAAERR-ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 82 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~-~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 82 (104)
+++|+..++..- ..+.... ++.++|.++...|++++|+.++++++.+.... .. ++.+ +.+.++.
T Consensus 16 ~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~--~~----~~~~--------~~~~~a~ 81 (99)
T 2kc7_A 16 IENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS--PA----LQAR--------KMVMDIL 81 (99)
T ss_dssp HHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS--TH----HHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc--HH----HHHH--------HHHHHHH
Confidence 455555554331 1112234 78999999999999999999999998763221 11 1111 5567777
Q ss_pred HHHHHHHHHHHH
Q psy10736 83 DYHLRHLIIAQQ 94 (104)
Q Consensus 83 ~~~~~a~~~~~~ 94 (104)
.+|+++......
T Consensus 82 ~~~~~~~~~~p~ 93 (99)
T 2kc7_A 82 NFYNKDMYNQLE 93 (99)
T ss_dssp HHHCCTTHHHHC
T ss_pred HHHHHHhccCcc
Confidence 777777665443
No 197
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.70 E-value=6.1e-05 Score=41.01 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=43.4
Q ss_pred HHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChh----------HHHHHHHHHHHHHHH
Q psy10736 33 IFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP----------TAIDYHLRHLIIAQQ 94 (104)
Q Consensus 33 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~a~~~~~~ 94 (104)
...+.+++|+..+++++++. +.-..++.++|.++...++++ +|+..|++++++-..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~------P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSN------PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHhHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC
Confidence 34568899999999988762 223467889999999888764 999999999987543
No 198
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.62 E-value=0.00041 Score=34.93 Aligned_cols=55 Identities=22% Similarity=0.117 Sum_probs=40.0
Q ss_pred hhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChH
Q psy10736 5 PNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRA 59 (104)
Q Consensus 5 ~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 59 (104)
+++|+..++..- ..+....++..+|.++...|++++|+.++++++.+....++..
T Consensus 35 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 90 (115)
T 2kat_A 35 FDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQ 90 (115)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHH
Confidence 445555444321 1123356789999999999999999999999999987776654
No 199
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.54 E-value=0.0002 Score=42.40 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=50.9
Q ss_pred HHHHHHHHHhHHHHHH-------hccH-------HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHH
Q psy10736 19 AAERRANSNLGNSHIF-------LGEY-------QAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDY 84 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~-------~~~~-------~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 84 (104)
+....++..+|..+.. .|++ ++|+..+++++... .+....++.++|.++...|++++|...
T Consensus 47 p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~-----~p~~~~~~~~~~~~~~~~~~~~~A~~~ 121 (308)
T 2ond_A 47 GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL-----LKKNMLLYFAYADYEESRMKYEKVHSI 121 (308)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT-----TTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh-----CcccHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3445566777766653 4775 89999999988721 112235788999999999999999999
Q ss_pred HHHHHHH
Q psy10736 85 HLRHLII 91 (104)
Q Consensus 85 ~~~a~~~ 91 (104)
|++++++
T Consensus 122 ~~~al~~ 128 (308)
T 2ond_A 122 YNRLLAI 128 (308)
T ss_dssp HHHHHTS
T ss_pred HHHHHhc
Confidence 9999975
No 200
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.46 E-value=0.00079 Score=42.48 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=48.8
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHH-----------------
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACY----------------- 66 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~----------------- 66 (104)
.|++|...+... ..+..++.++...|++++|++.++++...-. ......++.
T Consensus 137 ~yeeA~~~Y~~a-------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~----Wk~v~~aCv~~~ef~lA~~~~l~L~~ 205 (449)
T 1b89_A 137 MYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKANSTRT----WKEVCFACVDGKEFRLAQMCGLHIVV 205 (449)
T ss_dssp CTTTHHHHHHHT-------TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHH----HHHHHHHHHHTTCHHHHHHTTTTTTT
T ss_pred CHHHHHHHHHHh-------hhHHHHHHHHHHhccHHHHHHHHHHcCCchh----HHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 355566666554 3467788888888888888888887732200 011112222
Q ss_pred ------HHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 67 ------SLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 67 ------~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
.+...|...|.+++|+.++++++.+
T Consensus 206 ~ad~l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 206 HADELEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred CHhhHHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 3447788888888888888888643
No 201
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.37 E-value=0.00045 Score=43.84 Aligned_cols=78 Identities=8% Similarity=-0.086 Sum_probs=41.1
Q ss_pred HHHHHHHHhC--CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHH
Q psy10736 7 DRLKIAREFG--DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDY 84 (104)
Q Consensus 7 ~a~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 84 (104)
+|+..++..- ..+....++..++..+...|++++|...|++++.+.. .++ ..++.+.+.++...|++++|...
T Consensus 304 ~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p--~~~---~~~~~~~~~~~~~~~~~~~A~~~ 378 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIED--IDP---TLVYIQYMKFARRAEGIKSGRMI 378 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS--SCH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccc--cCc---hHHHHHHHHHHHHhcCHHHHHHH
Confidence 4555444332 1233455666777777777777777777777765311 111 12344444444444445555555
Q ss_pred HHHHH
Q psy10736 85 HLRHL 89 (104)
Q Consensus 85 ~~~a~ 89 (104)
|++++
T Consensus 379 ~~~Al 383 (530)
T 2ooe_A 379 FKKAR 383 (530)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 202
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.30 E-value=0.00061 Score=42.67 Aligned_cols=27 Identities=4% Similarity=-0.102 Sum_probs=20.0
Q ss_pred HHHHhHHHHHHhc---cHHHHHHHHHHHHH
Q psy10736 24 ANSNLGNSHIFLG---EYQAASEHYKRTLV 50 (104)
Q Consensus 24 ~~~~l~~~~~~~~---~~~~A~~~~~~al~ 50 (104)
+++++|.++...| ++++|+.+++++.+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~ 207 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVS 207 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHH
Confidence 6677777777777 77778777777654
No 203
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.27 E-value=0.002 Score=34.83 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=37.8
Q ss_pred hhHHHHHHHHhC--C-HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 5 PNDRLKIAREFG--D-KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 5 ~~~a~~~~~~~~--~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
.++++.+.+..- + +.....+++++|..+...|+|++|.+++++++++
T Consensus 51 ~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 51 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 456666665442 2 4467889999999999999999999999998876
No 204
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.20 E-value=0.001 Score=33.27 Aligned_cols=32 Identities=19% Similarity=0.068 Sum_probs=29.1
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
....++..+|.++...|+++.|+.++++++.+
T Consensus 44 ~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 44 DKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999876
No 205
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.17 E-value=0.006 Score=43.87 Aligned_cols=81 Identities=9% Similarity=-0.034 Sum_probs=56.6
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH-------------hCChHHH--------H
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD-------------LGDRAVE--------A 62 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-------------~~~~~~~--------~ 62 (104)
.+++|++.+.+.++. ..+..++.++...|++++|++++..++...+. .+..... .
T Consensus 1120 ~~kEAIdsYiKAdD~----say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ 1195 (1630)
T 1xi4_A 1120 MVKEAIDSYIKADDP----SSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNN 1195 (1630)
T ss_pred CHHHHHHHHHhcCCh----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCH
Confidence 467888888777664 44577899999999999999999887643311 0111000 1
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 63 QACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 63 ~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
..+..+|..+...|++++|..+|.++
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 23557888888888888888888776
No 206
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=97.13 E-value=0.0026 Score=40.69 Aligned_cols=64 Identities=20% Similarity=0.182 Sum_probs=55.3
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
..+++..+|........+..|..+|.+|..+....| ..++.+|.+....|+.-+|+.+|-+++.
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G------~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNG------QPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBS------HHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCC------chHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 346788999999999999999999999999865555 5678999999999999999999998873
No 207
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.07 E-value=0.00031 Score=44.26 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=31.7
Q ss_pred HHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 24 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 24 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
++.++|..+...|.+++|..+|.++ ..+..++.++...|++++|++.++++.
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~n~~~LA~~L~~Lg~yq~AVea~~KA~ 175 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKAN 175 (449)
T ss_dssp -------------CTTTHHHHHHHT--------------TCHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------------hhHHHHHHHHHHhccHHHHHHHHHHcC
Confidence 7788888888888888888888765 246688899999999999999988883
No 208
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.98 E-value=0.011 Score=30.93 Aligned_cols=66 Identities=12% Similarity=0.113 Sum_probs=46.5
Q ss_pred HHHHHHhHHHHHHhccHHH---HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQA---ASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~---A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..+-.++|.++....+... ++..++..+ +. +++...-.+++.+|..+...|+|.+|..+++..++.
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~---~~-~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELL---PK-GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHT---TT-SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH---hc-CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3456667777776665554 555444422 22 334455678999999999999999999999988865
No 209
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.91 E-value=0.005 Score=39.09 Aligned_cols=27 Identities=11% Similarity=-0.039 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 64 ACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 64 ~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
++..++..+...|+.++|...|++++.
T Consensus 427 ~~~~~~~~~~~~g~~~~Ar~~~~~al~ 453 (530)
T 2ooe_A 427 YVLAYIDYLSHLNEDNNTRVLFERVLT 453 (530)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHhhHHHHHHHHHh
Confidence 344555555566666666666666654
No 210
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.82 E-value=0.0099 Score=35.85 Aligned_cols=65 Identities=11% Similarity=-0.042 Sum_probs=51.1
Q ss_pred HHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 24 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 24 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.+..+|.++...|++++|++++.+.++. ++......++..++.++...|+.+.|.+.++++.+..
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~----~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~ 166 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDN----DEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAI 166 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTS----SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhcc----CCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 3468899999999999999999887542 1112345677888999999999999999998876553
No 211
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.80 E-value=0.013 Score=35.18 Aligned_cols=53 Identities=15% Similarity=-0.031 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-----CChhHHHHHHHHHHHHHH
Q psy10736 37 EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL-----RDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 37 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-----g~~~~A~~~~~~a~~~~~ 93 (104)
....|...+++++++ ........++..+|.+|... |+.++|..+|++++++..
T Consensus 178 ~l~~A~a~lerAleL----DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP 235 (301)
T 3u64_A 178 TVHAAVMMLERACDL----WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCS 235 (301)
T ss_dssp HHHHHHHHHHHHHHH----CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHh----CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCC
Confidence 346666667776665 33444578999999999995 999999999999999876
No 212
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=96.77 E-value=0.0049 Score=39.98 Aligned_cols=65 Identities=9% Similarity=-0.022 Sum_probs=48.8
Q ss_pred HHHHHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGE----------YQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR--DYPTAIDYHLRHL 89 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~a~ 89 (104)
..+++..+.+....++ +++++..+++++..-.+ -..++...+.++...+ +++++++++++++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK------~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l 136 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK------SYGTWHHRCWLLSRLPEPNWARELELCARFL 136 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 4567777788877777 88888888888764221 2356788888888888 6689999999888
Q ss_pred HHH
Q psy10736 90 IIA 92 (104)
Q Consensus 90 ~~~ 92 (104)
++-
T Consensus 137 ~~d 139 (567)
T 1dce_A 137 EAD 139 (567)
T ss_dssp HHC
T ss_pred hhc
Confidence 763
No 213
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.015 Score=36.53 Aligned_cols=69 Identities=12% Similarity=0.103 Sum_probs=42.3
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
...++..+-.++...+++..+..++.++.......+++..........|.++...++|..|..+|.++.
T Consensus 167 kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~ 235 (429)
T 4b4t_R 167 KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSL 235 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHh
Confidence 345555555666666666666666666666655555555555555566666666666766666665543
No 214
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.72 E-value=0.03 Score=33.80 Aligned_cols=86 Identities=8% Similarity=-0.086 Sum_probs=51.9
Q ss_pred chhHHHHHHHHh-CCH--HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC--Ch
Q psy10736 4 QPNDRLKIAREF-GDK--AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR--DY 78 (104)
Q Consensus 4 ~~~~a~~~~~~~-~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~ 78 (104)
-+++|+.++.+. +.. .....++..++.++...|+.+.|...+++..+.....-...........-+++....| ++
T Consensus 115 ~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~ 194 (310)
T 3mv2_B 115 DLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETA 194 (310)
T ss_dssp CHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTT
T ss_pred CHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccH
Confidence 367788887765 322 2456667777889999999999999998764431100000111223333344455555 77
Q ss_pred hHHHHHHHHHH
Q psy10736 79 PTAIDYHLRHL 89 (104)
Q Consensus 79 ~~A~~~~~~a~ 89 (104)
++|...|++..
T Consensus 195 q~A~~~f~El~ 205 (310)
T 3mv2_B 195 TSNFYYYEELS 205 (310)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777777754
No 215
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.0093 Score=37.39 Aligned_cols=76 Identities=14% Similarity=0.070 Sum_probs=62.0
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcchh
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 99 (104)
...++..+|..|...|++++|.+.+.++.+.....+. ...+++.+-.++...+++..+..++.++..+....+++.
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~---kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~ 205 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA---KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWE 205 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH---HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHH
Confidence 4456788999999999999999999998876654433 346777888889999999999999999988877666654
No 216
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.41 E-value=0.035 Score=29.07 Aligned_cols=46 Identities=20% Similarity=0.149 Sum_probs=37.2
Q ss_pred hHHHHHHHHhC--C-HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 6 NDRLKIAREFG--D-KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 6 ~~a~~~~~~~~--~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
.+++.+.+.+- + +...-.+++.+|..++..|+|++|.++++..+++
T Consensus 55 ~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 55 RKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 35666665542 2 4578899999999999999999999999998776
No 217
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.28 E-value=0.047 Score=29.22 Aligned_cols=67 Identities=13% Similarity=0.044 Sum_probs=46.6
Q ss_pred HHHHHHHHhHHHHHHhccHH---HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQ---AASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~---~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
.-..+..+.+.+.....+.. +++..++. +++...+ ..-.+++.++..+...|+|.+|..+.+..++.
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~---l~~~~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTD---IYKEAES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHH---HHHHCCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHH---HHhcCcc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34556677777777776544 55555544 4444332 23468899999999999999999999888754
No 218
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.14 E-value=0.054 Score=28.64 Aligned_cols=64 Identities=13% Similarity=0.034 Sum_probs=44.8
Q ss_pred HHHHHhHHHHHHhcc---HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGE---YQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
.+-.+.|.+.....+ ..+++..++.. ++.. +...-.+++.++..+...|+|.+|..+.+..++.
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l---~~~~--~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDI---YKEA--ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHH---HHHC--GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHH---HhcC--cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 455666666666654 44566666553 3332 3334578999999999999999999999888754
No 219
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.13 Score=32.54 Aligned_cols=83 Identities=12% Similarity=0.033 Sum_probs=67.4
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD-LGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.+.......+......+...+++..|...+.++...... ...+......+...|.++...++|.+|-.+|.++++....
T Consensus 171 ~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 171 MEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAI 250 (445)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccc
Confidence 455667788888889999999999999999998654444 3456666788888899999999999999999999887766
Q ss_pred hcch
Q psy10736 95 LMDR 98 (104)
Q Consensus 95 ~~~~ 98 (104)
.+++
T Consensus 251 ~~d~ 254 (445)
T 4b4t_P 251 KSDE 254 (445)
T ss_dssp HSCH
T ss_pred cCCH
Confidence 6554
No 220
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=95.83 E-value=0.03 Score=33.63 Aligned_cols=85 Identities=12% Similarity=-0.152 Sum_probs=57.1
Q ss_pred CchhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhc--cHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH----HHh
Q psy10736 3 VQPNDRLKIAREF-GDKAAERRANSNLGNSHIFLG--EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTY----TLL 75 (104)
Q Consensus 3 ~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~----~~~ 75 (104)
.+-++|+.+.... .-.|.-..+++..+.+....+ ++++++..+.+++....+. ..+++..+.++ ...
T Consensus 47 e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~------y~aW~~R~~iL~~~~~~l 120 (306)
T 3dra_A 47 EYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKN------YQIWNYRQLIIGQIMELN 120 (306)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC------CHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCccc------HHHHHHHHHHHHHHHHhc
Confidence 3445566544332 222233456777888888888 9999999999988653322 24556666666 555
Q ss_pred ---CChhHHHHHHHHHHHHHH
Q psy10736 76 ---RDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 76 ---g~~~~A~~~~~~a~~~~~ 93 (104)
+++++++.+++++++...
T Consensus 121 ~~~~~~~~EL~~~~~~l~~~p 141 (306)
T 3dra_A 121 NNDFDPYREFDILEAMLSSDP 141 (306)
T ss_dssp TTCCCTHHHHHHHHHHHHHCT
T ss_pred cccCCHHHHHHHHHHHHHhCC
Confidence 789999999999987543
No 221
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.78 E-value=0.23 Score=32.96 Aligned_cols=89 Identities=11% Similarity=0.085 Sum_probs=54.3
Q ss_pred hhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH------HHHhCChHHHHHH---H-----HH-HH
Q psy10736 5 PNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL------AQDLGDRAVEAQA---C-----YS-LG 69 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~~~~---~-----~~-l~ 69 (104)
++.|+++++...++ ..+..+|..+...++++.|+.+|.++-+. ....++......+ . .+ ..
T Consensus 668 ~~~A~~~~~~~~~~----~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~ 743 (814)
T 3mkq_A 668 LTLARDLLTDESAE----MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAF 743 (814)
T ss_dssp HHHHHHHHTTCCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhhCcH----hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHH
Confidence 34555555555443 45688999999999999999999985332 2233443322111 0 11 23
Q ss_pred HHHHHhCChhHHHHHHH------HHHHHHHHhcc
Q psy10736 70 NTYTLLRDYPTAIDYHL------RHLIIAQQLMD 97 (104)
Q Consensus 70 ~~~~~~g~~~~A~~~~~------~a~~~~~~~~~ 97 (104)
.++...|++++|++.|. +|+.+++..+.
T Consensus 744 ~~~~~~g~~~~a~~~~~~~~~~~~A~~lA~~~~~ 777 (814)
T 3mkq_A 744 NAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGL 777 (814)
T ss_dssp HHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 35666788888887764 45666666553
No 222
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.59 E-value=0.081 Score=35.77 Aligned_cols=60 Identities=17% Similarity=0.057 Sum_probs=48.5
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
..+...+..+...|+++-|+...++|...+ +....++..|+.+|..+|+|+.|+=.+..+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a------PseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELA------LDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------SSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcC------chhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 355556777788899999999999987763 334578899999999999999999777655
No 223
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=95.53 E-value=0.028 Score=36.51 Aligned_cols=64 Identities=6% Similarity=-0.166 Sum_probs=51.6
Q ss_pred HHHHHHhHHHHHHhc--cHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC-ChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLG--EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR-DYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~ 91 (104)
-.++++.+.+....+ +++++++++.++++.-. .-..++.+.+.+....| .+++++++++++++.
T Consensus 107 y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~------~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~ 173 (567)
T 1dce_A 107 YGTWHHRCWLLSRLPEPNWARELELCARFLEADE------RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR 173 (567)
T ss_dssp HHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcc------ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 456788888888899 77999999999988621 11367888899999999 899999999888754
No 224
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=95.48 E-value=0.088 Score=26.07 Aligned_cols=68 Identities=10% Similarity=-0.088 Sum_probs=47.7
Q ss_pred hHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcc
Q psy10736 28 LGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMD 97 (104)
Q Consensus 28 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 97 (104)
.|..+...|+|-+|-+.++..-.-.+........+.+....|..+...|+. |...+.+++......+.
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~ 74 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPC 74 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCS
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCC
Confidence 345566779999998888875443322112334566777778888888988 99999999998776654
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.43 E-value=0.034 Score=29.41 Aligned_cols=46 Identities=20% Similarity=0.150 Sum_probs=35.3
Q ss_pred hHHHHHHHHh--CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 6 NDRLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 6 ~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
.+++.+.+.+ .++...-.+++.+|..+...|+|++|.++.+..+++
T Consensus 60 ~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 60 RLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 3555555433 234467889999999999999999999999987765
No 226
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.18 E-value=0.042 Score=26.91 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=29.7
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
+.-..++..+|..+...|++++|+.++++.++....
T Consensus 40 p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 40 PYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 344677888999999999999999999998765433
No 227
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.06 E-value=0.037 Score=29.62 Aligned_cols=46 Identities=20% Similarity=0.127 Sum_probs=34.6
Q ss_pred hHHHHHHHHhC--CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 6 NDRLKIAREFG--DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 6 ~~a~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
++++.+.+.+- ++...-.+++.+|..+...|+|++|.++.+..+++
T Consensus 59 ~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 59 RLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34555554432 22356778999999999999999999999987765
No 228
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.01 E-value=0.37 Score=30.50 Aligned_cols=72 Identities=15% Similarity=0.016 Sum_probs=57.7
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.+++...++..+...|++.+|...+.....-.....+.......+.....++...+++.+|...++++....
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~ 207 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKT 207 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 566778899999999999999999988654333344556667888888999999999999999999986533
No 229
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=94.92 E-value=0.36 Score=29.98 Aligned_cols=34 Identities=0% Similarity=-0.252 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 59 AVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 59 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
+....++..++..+...|++++|+..+++++.+-
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE 307 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 3345678888888999999999999999999883
No 230
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.83 E-value=0.021 Score=36.84 Aligned_cols=75 Identities=19% Similarity=0.189 Sum_probs=58.7
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL-GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.|....+..++.+-..|...+.++.|..+..++. +... ......+.-++.+|.++...++|.+|.+++..|+..+
T Consensus 225 ~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 225 HDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp SSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred cCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 4556777788888888999999999999888864 2222 2333457788899999999999999999999988544
No 231
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=94.58 E-value=0.37 Score=29.36 Aligned_cols=48 Identities=10% Similarity=0.048 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC--hhHHHHHHHHHHHH
Q psy10736 38 YQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRD--YPTAIDYHLRHLII 91 (104)
Q Consensus 38 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~--~~~A~~~~~~a~~~ 91 (104)
+++++.++.+++....+ -..++...+.++...|+ +++++.++.+++++
T Consensus 90 l~~EL~~~~~~L~~~PK------ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~ 139 (331)
T 3dss_A 90 VKAELGFLESCLRVNPK------SYGTWHHRCWLLSRLPEPNWARELELCARFLEA 139 (331)
T ss_dssp HHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC------CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh
Confidence 45555555555443111 12345555666666653 56666666666654
No 232
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=94.52 E-value=0.12 Score=28.22 Aligned_cols=69 Identities=9% Similarity=0.029 Sum_probs=50.4
Q ss_pred HHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC-----hHHHHHHH-HHHHHHHHHhCChhHHHHHHHHHHHHHHHhcc
Q psy10736 26 SNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD-----RAVEAQAC-YSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMD 97 (104)
Q Consensus 26 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----~~~~~~~~-~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 97 (104)
+.-+..+...|+|-+|-+.++..- +.... ....+.+. ...|..+...|+...|...+.+++........
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W---~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~ 110 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEW---YNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPN 110 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHT---TTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHhCCCchHHHHHHHHHH---HhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCC
Confidence 334556666799999988887743 33322 23456667 77788889999999999999999998766543
No 233
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.49 E-value=0.3 Score=27.10 Aligned_cols=79 Identities=13% Similarity=0.003 Sum_probs=51.7
Q ss_pred hhHHHHHHHHhCCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHH------HHhCChHHHHHH---------HHHHH
Q psy10736 5 PNDRLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLA------QDLGDRAVEAQA---------CYSLG 69 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------~~~~~~~~~~~~---------~~~l~ 69 (104)
++.|+++++..++. ..+..+|......|+++-|..+|.++-+.. ...|+....... ++...
T Consensus 21 l~~A~e~a~~l~~~----~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af 96 (177)
T 3mkq_B 21 LDAALDEAKKLNDS----ITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSML 96 (177)
T ss_dssp HHHHHHHHHHHCCH----HHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhCCH----HHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHH
Confidence 56777777777553 367889999999999999999999865443 234443322111 11224
Q ss_pred HHHHHhCChhHHHHHHHH
Q psy10736 70 NTYTLLRDYPTAIDYHLR 87 (104)
Q Consensus 70 ~~~~~~g~~~~A~~~~~~ 87 (104)
.+++..|+.+++++.+.+
T Consensus 97 ~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 97 LNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHH
Confidence 456677888877776644
No 234
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=94.38 E-value=0.36 Score=28.99 Aligned_cols=62 Identities=2% Similarity=-0.243 Sum_probs=45.4
Q ss_pred HHHHhHHHH----HHh---ccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChh--HHHHHHHHHHHH
Q psy10736 24 ANSNLGNSH----IFL---GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP--TAIDYHLRHLII 91 (104)
Q Consensus 24 ~~~~l~~~~----~~~---~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~a~~~ 91 (104)
+++..+.+. ... +++++++..+.++++.-.+ -..++...+.+....|.++ +++++++++++.
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk------ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK------NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 445555555 445 6889999999998864211 1357788888888899988 999999998864
No 235
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=94.01 E-value=0.9 Score=32.32 Aligned_cols=68 Identities=3% Similarity=-0.156 Sum_probs=45.3
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
....|+.+-..+...|+.++|...+.+......+.-.+. ..+|+.+-..|...|+.++|.+.|+++.+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd--vvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT--LDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC--HhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 445677777788888888888888876544333222222 24677777777788888888887777653
No 236
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.95 E-value=0.27 Score=26.78 Aligned_cols=66 Identities=8% Similarity=-0.050 Sum_probs=49.4
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
.+..+...+.. ...+|.++|.+.|+.++.+ +... +.++..-+..-.++|+...|...+.+++.++.
T Consensus 60 YI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~----hKkF--AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~ 125 (161)
T 4h7y_A 60 FARIQVRFAEL-KAIQEPDDARDYFQMARAN----CKKF--AFVHISFAQFELSQGNVKKSKQLLQKAVERGA 125 (161)
T ss_dssp HHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH----CTTB--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH----hHHH--HHHHHHHHHHHHHcccHHHHHHHHHHHhccCC
Confidence 34444444433 4558999999999999886 2223 66777778888899999999999999987554
No 237
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.89 E-value=0.66 Score=28.75 Aligned_cols=67 Identities=15% Similarity=0.007 Sum_probs=49.3
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
...+...++..+...|++++++..+.+.+... |... .++..+-.++...|+..+|+..|+++-....
T Consensus 170 ~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~-----P~~E-~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~ 236 (388)
T 2ff4_A 170 KVLAHTAKAEAEIACGRASAVIAELEALTFEH-----PYRE-PLWTQLITAYYLSDRQSDALGAYRRVKTTLA 236 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTCH-HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-----CCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34556667778888899999998888765431 2111 3556666778999999999999999987543
No 238
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=93.67 E-value=0.68 Score=28.22 Aligned_cols=64 Identities=6% Similarity=-0.167 Sum_probs=49.1
Q ss_pred HHHHHHhHHHHHHhc--cHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC-hhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLG--EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRD-YPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~A~~~~~~a~~~ 91 (104)
-.+++..+.+....+ ++++++.++.++++.-. .+ ..++...+.+....|. ++++++++.++++.
T Consensus 108 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dp--rN----y~AW~~R~~vl~~l~~~~~eel~~~~~~I~~ 174 (331)
T 3dss_A 108 YGTWHHRCWLLSRLPEPNWARELELCARFLEADE--RN----FHCWDYRRFVAAQAAVAPAEELAFTDSLITR 174 (331)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCT--TC----HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 445677777777777 48999999999887521 11 3567888888888898 58999999999865
No 239
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=93.66 E-value=0.82 Score=29.35 Aligned_cols=62 Identities=10% Similarity=-0.030 Sum_probs=34.0
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
.+|+.+-..+...|++++|.+.+.+... .+-.+. ..+++.+-..|...|+.++|.+.+++..
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~----~g~~Pd-~~tyn~lI~~~~~~g~~~~A~~l~~~M~ 167 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKA----FGIQPR-LRSYGPALFGFCRKGDADKAYEVDAHMV 167 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH----TTCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH----cCCCCc-cceehHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3566666777777777777777766432 121111 1334444455555555555555555543
No 240
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=93.56 E-value=0.18 Score=30.96 Aligned_cols=82 Identities=11% Similarity=-0.039 Sum_probs=52.4
Q ss_pred chhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhc-cHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-C-Chh
Q psy10736 4 QPNDRLKIAREF-GDKAAERRANSNLGNSHIFLG-EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL-R-DYP 79 (104)
Q Consensus 4 ~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g-~~~ 79 (104)
+..+++++.... ...+.-..+++..+.+....+ .+++++..+.+++.... . -..++...+.++... + +++
T Consensus 69 ~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nP---K---ny~aW~hR~wlL~~l~~~~~~ 142 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNL---K---SYQVWHHRLLLLDRISPQDPV 142 (349)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTC---C---CHHHHHHHHHHHHHHCCSCCH
T ss_pred CCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCC---C---cHHHHHHHHHHHHHhcCCChH
Confidence 334555544332 111223445677777777788 58899998888774321 1 135677778887777 7 788
Q ss_pred HHHHHHHHHHHH
Q psy10736 80 TAIDYHLRHLII 91 (104)
Q Consensus 80 ~A~~~~~~a~~~ 91 (104)
++++++.++++.
T Consensus 143 ~EL~~~~k~L~~ 154 (349)
T 3q7a_A 143 SEIEYIHGSLLP 154 (349)
T ss_dssp HHHHHHHHHTSS
T ss_pred HHHHHHHHHHHh
Confidence 888888887754
No 241
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=93.47 E-value=0.6 Score=26.98 Aligned_cols=68 Identities=3% Similarity=-0.194 Sum_probs=48.9
Q ss_pred HHHhHHHHHHh-----ccHHHHHHHHHHHHHHHHHh---CChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 25 NSNLGNSHIFL-----GEYQAASEHYKRTLVLAQDL---GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 25 ~~~l~~~~~~~-----~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
+.-.|..|... |+.+.|...|+.|.++++.. .+|..++.+++.-...|.-.+++++|....++++...
T Consensus 123 ~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 123 LKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 33346555543 55789999999999998852 2344455666665556677899999999999998764
No 242
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=93.06 E-value=0.24 Score=23.66 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=25.4
Q ss_pred HHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 25 NSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 25 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
...+|.-|...|+|+.|+.+|+.+++...+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999876554
No 243
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=92.87 E-value=0.87 Score=28.02 Aligned_cols=64 Identities=8% Similarity=-0.106 Sum_probs=47.2
Q ss_pred HHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC-ChhHHHHHHHHHHHHH
Q psy10736 23 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR-DYPTAIDYHLRHLIIA 92 (104)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~~ 92 (104)
.++..+.......+..++|++.+.+++.+-. .-..+++..+.++...| ++++++.++++++...
T Consensus 55 ~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP------~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~n 119 (349)
T 3q7a_A 55 DAMDYFRAIAAKEEKSERALELTEIIVRMNP------AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQN 119 (349)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHhCc------hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC
Confidence 3444454555556677899999999887622 22367888899999999 5999999999998654
No 244
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.52 E-value=1.3 Score=28.40 Aligned_cols=65 Identities=9% Similarity=-0.151 Sum_probs=50.3
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..+|+.+-..+...|+.++|.+.+.+..+ .|-.+. ..++..+-..+...|+.++|.+.+++..+.
T Consensus 140 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~----~G~~Pd-~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 140 LRSYGPALFGFCRKGDADKAYEVDAHMVE----SEVVPE-EPELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cceehHHHHHHHHCCCHHHHHHHHHHHHh----cCCCCC-HHHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 44677777889999999999999988643 232222 256788888999999999999999987654
No 245
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=92.40 E-value=0.45 Score=22.70 Aligned_cols=31 Identities=26% Similarity=0.334 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 65 CYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 65 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
...+|.-|...|+|+.|+.+|+.+++...++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~ 45 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKY 45 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 4567888889999999999999999876654
No 246
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=92.37 E-value=1 Score=26.72 Aligned_cols=67 Identities=21% Similarity=0.169 Sum_probs=44.8
Q ss_pred HHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHH-h----CChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 25 NSNLGNSHIFLGE----------YQAASEHYKRTLVLAQD-L----GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 25 ~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~-~----~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
+.-.|..|...-+ .+.|.+.|++|.++++. . -+|..++.+++.-...|.-.+++++|....++++
T Consensus 145 ~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AF 224 (268)
T 3efz_A 145 IKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAI 224 (268)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3333777665421 37788999999999864 3 3345555555544444446899999999999887
Q ss_pred HH
Q psy10736 90 II 91 (104)
Q Consensus 90 ~~ 91 (104)
+-
T Consensus 225 de 226 (268)
T 3efz_A 225 QA 226 (268)
T ss_dssp HH
T ss_pred hh
Confidence 65
No 247
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=92.34 E-value=0.52 Score=23.26 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 52 (104)
+-..+..+...+..+...|.|++|+++.+++...+
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL 45 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYL 45 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 34456666777777788888888888888876653
No 248
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=92.18 E-value=1.1 Score=28.03 Aligned_cols=78 Identities=22% Similarity=0.214 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHhHHHHHHhc--cHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLG--EYQAASEHYKRTLVLAQDL-GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
|.....-.++.+||...-..- ....++..|.+++..++.. ++. .+.-+..+|..++..+++.+|+..+-++-...
T Consensus 249 GhL~rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~--HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi 326 (472)
T 3re2_A 249 GHIKTYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDH--HIYPYTYLGGYYYRKKKYYEAIASWVDAGYVA 326 (472)
T ss_dssp TTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC--CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cchhhCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccC--CccchhhhhhhhhhcchHHHHHHHHHHHHHHH
Confidence 333333444555555443321 2234889999999888765 332 24667888999999999999999998887766
Q ss_pred HHh
Q psy10736 93 QQL 95 (104)
Q Consensus 93 ~~~ 95 (104)
...
T Consensus 327 ~~Y 329 (472)
T 3re2_A 327 GKY 329 (472)
T ss_dssp TTS
T ss_pred HHc
Confidence 554
No 249
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=92.08 E-value=1.1 Score=28.54 Aligned_cols=79 Identities=13% Similarity=0.022 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHhHHHHHHhc--cHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLG--EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
|.....-.++.+||.+.-..- ..+.++..|.+|+..++..-.. ..+..|..+|-.+...+++.+|+..+-++-....
T Consensus 256 Ghl~~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~-~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~ 334 (489)
T 4gq4_A 256 GHLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRD-EHIYPYMYLAGYHCRNRNVREALQAWADTATVIQ 334 (489)
T ss_dssp TTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTT-CCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred cchhhcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhccc-CcccceeecchHHHHhhhHHHHHHHhhhhhhhhh
Confidence 433344455666666554332 2245788999999998875321 2357788999999999999999999988876655
Q ss_pred Hh
Q psy10736 94 QL 95 (104)
Q Consensus 94 ~~ 95 (104)
+.
T Consensus 335 ~Y 336 (489)
T 4gq4_A 335 DY 336 (489)
T ss_dssp TS
T ss_pred hc
Confidence 44
No 250
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=91.79 E-value=0.58 Score=22.67 Aligned_cols=38 Identities=11% Similarity=-0.004 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
.....+..+...|.-.-..|++++|+.+|..+++.+-.
T Consensus 11 ~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 11 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 44555666777777888889999999999999988653
No 251
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=91.72 E-value=0.64 Score=22.95 Aligned_cols=36 Identities=14% Similarity=0.036 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 58 RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 58 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+...+..+...+..+...|.|++|+++.+++.....
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 344566677777888888888888888888775544
No 252
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=91.69 E-value=1.3 Score=26.65 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=67.9
Q ss_pred CchhHHHHHHHH-hCCHHHHHHHHHHhHHHHHHhccH--HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh----
Q psy10736 3 VQPNDRLKIARE-FGDKAAERRANSNLGNSHIFLGEY--QAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL---- 75 (104)
Q Consensus 3 ~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~---- 75 (104)
+++.+|..+++. ..|......++..+.........+ +.-.....++...+.+.=..+....+.+..+..+|..
T Consensus 123 EFf~qAf~iYEe~IsdSk~Q~~al~~ii~tL~~~~~f~~enye~L~tk~t~~askLLKK~dQcraV~~cshLfW~~~~~~ 202 (298)
T 2r17_C 123 EFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTD 202 (298)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHTHHHHHTCBCTT
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHccCCCHhhHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcCCCccc
Confidence 467889998887 788888888888887777666543 3333333444444444445566777888888888751
Q ss_pred ------CChhHHHHHHHHHHHHHHHhcch
Q psy10736 76 ------RDYPTAIDYHLRHLIIAQQLMDR 98 (104)
Q Consensus 76 ------g~~~~A~~~~~~a~~~~~~~~~~ 98 (104)
.|.+..+++++++++++...-++
T Consensus 203 ~~~~~~rd~krVleCLqkaLkiA~~~~d~ 231 (298)
T 2r17_C 203 KNGEELHGGKRVMECLKKALKIANQCMDP 231 (298)
T ss_dssp TTTCBCCCHHHHHHHHHHHHHHHHHSCCH
T ss_pred cchhhccchHHHHHHHHHHHHHHHHHhCh
Confidence 46779999999999999988554
No 253
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=91.58 E-value=0.62 Score=22.57 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
+..+...+.-....|++++|+.+|..+++.+-.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 334445555567778888888888888876543
No 254
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=91.34 E-value=0.65 Score=22.35 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=24.7
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
.+.-+...|...-..|++++|+.+|.++++.+..
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3444555666677778899999999988887653
No 255
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=91.28 E-value=0.66 Score=22.32 Aligned_cols=29 Identities=10% Similarity=-0.114 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 66 YSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 66 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
...|.-....|++++|+.+|.++++.+..
T Consensus 23 v~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 23 AINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 34455667889999999999999887654
No 256
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=91.02 E-value=1.6 Score=27.88 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=49.2
Q ss_pred HHHHHHhHHHHHHhc--cHHHHHHHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 22 RRANSNLGNSHIFLG--EYQAASEHYKRTLVLAQDLG-DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~--~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
-+++.+||...-..- .-..++..|.+++..++..- +. .+.-+..+|..++..+++.+|+..+-++-......
T Consensus 277 PmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~--HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~Y 351 (550)
T 3u84_A 277 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDE--HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDY 351 (550)
T ss_dssp HHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTC--CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred chhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccC--CccceeecchhhhhcchHHHHHHHHHHHHHHHHHc
Confidence 344445544433321 11257889999998887652 32 24667888999999999999999998887766554
No 257
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.71 E-value=0.77 Score=22.05 Aligned_cols=30 Identities=20% Similarity=0.176 Sum_probs=16.8
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
+.-+...|...-..|++++|+.+|.++++.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 334444455555556666666666666554
No 258
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=89.11 E-value=1.1 Score=21.49 Aligned_cols=25 Identities=16% Similarity=0.074 Sum_probs=16.6
Q ss_pred HHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 70 NTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 70 ~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.-....|++++|+.+|..+++.+..
T Consensus 19 ve~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 19 VKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3445667777777777777776543
No 259
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=88.83 E-value=1.5 Score=22.59 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=24.8
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
+..+...|.-.-..|++++|+.+|..+++++..
T Consensus 18 Ai~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 18 AIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 334455555666779999999999999998654
No 260
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=88.82 E-value=2.4 Score=25.07 Aligned_cols=77 Identities=17% Similarity=0.011 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHH-hC--ChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGE----------YQAASEHYKRTLVLAQD-LG--DRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+....+..+.-.|..|...-+ -+.|.+.|++|.+++.. .. +|..++.+++.-...|.-.+++++|..
T Consensus 141 ~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~ 220 (261)
T 3ubw_A 141 TGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACR 220 (261)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred cHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 344444444445777665422 26788999999998864 32 455555555554444555799999999
Q ss_pred HHHHHHHHHH
Q psy10736 84 YHLRHLIIAQ 93 (104)
Q Consensus 84 ~~~~a~~~~~ 93 (104)
..++++.-+-
T Consensus 221 LAk~AFd~Ai 230 (261)
T 3ubw_A 221 LAKAAFDDAI 230 (261)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876553
No 261
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=88.81 E-value=1.5 Score=22.58 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=8.8
Q ss_pred HhCChhHHHHHHHHHHHH
Q psy10736 74 LLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 74 ~~g~~~~A~~~~~~a~~~ 91 (104)
..|++++|+.+|..++++
T Consensus 30 ~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHTCHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHH
Confidence 334555555555555443
No 262
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=88.18 E-value=2.6 Score=24.58 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHH-hC--ChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGE----------YQAASEHYKRTLVLAQD-LG--DRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+....+..+.-.|..|...-+ -+.|.+.|++|.+++.. .. +|..++.+++.-...|.-.+++++|..
T Consensus 118 ~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~ 197 (236)
T 3iqu_A 118 DAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAIS 197 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred chHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 344444444455777766422 37788999999998864 33 355556565554455556799999998
Q ss_pred HHHHHHHHH
Q psy10736 84 YHLRHLIIA 92 (104)
Q Consensus 84 ~~~~a~~~~ 92 (104)
..++++.-+
T Consensus 198 lAk~Afd~A 206 (236)
T 3iqu_A 198 LAKTTFDEA 206 (236)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887644
No 263
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=88.12 E-value=2.1 Score=28.77 Aligned_cols=65 Identities=15% Similarity=0.019 Sum_probs=48.0
Q ss_pred HHHHHHhHHHHHHhccHHHHH-HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAAS-EHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~-~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
..++...+......|+.++|. ..+.+++.... .. ...+...+......|+++.|...|++++...
T Consensus 343 ~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P---~s---~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l 408 (679)
T 4e6h_A 343 PEIWFNMANYQGEKNTDSTVITKYLKLGQQCIP---NS---AVLAFSLSEQYELNTKIPEIETTILSCIDRI 408 (679)
T ss_dssp HHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCT---TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCC---CC---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 344555566667778888897 99999876432 11 2446677888889999999999999999864
No 264
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=87.90 E-value=3.1 Score=25.24 Aligned_cols=91 Identities=10% Similarity=-0.044 Sum_probs=61.3
Q ss_pred CchhHHHHHHHHhCC-HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHH------------HHHHHh--CChHHHHHHHHH
Q psy10736 3 VQPNDRLKIAREFGD-KAAERRANSNLGNSHIFLGEYQAASEHYKRTL------------VLAQDL--GDRAVEAQACYS 67 (104)
Q Consensus 3 ~~~~~a~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al------------~~~~~~--~~~~~~~~~~~~ 67 (104)
++.++++.+....++ +.+....+..+|..+..-+++.+|..++..+- +..++. +.+.........
T Consensus 114 ~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~R 193 (312)
T 2wpv_A 114 DVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSR 193 (312)
T ss_dssp HHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHH
Confidence 456788899887755 45556678888999999999999999875221 112222 554443333333
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 68 LGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 68 l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
...-|...|+...|...++.......
T Consensus 194 aVL~yL~l~n~~~A~~~~~~f~~~~~ 219 (312)
T 2wpv_A 194 LVFNYLFISNISFAHESKDIFLERFI 219 (312)
T ss_dssp HHHHHHHTTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 34457788999999999988776553
No 265
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.87 E-value=1.8 Score=22.33 Aligned_cols=29 Identities=24% Similarity=0.153 Sum_probs=12.5
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLV 50 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 50 (104)
+..+.+.|...-..|+.+.|+++|++.+.
T Consensus 22 AF~~Is~AL~~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 22 AFLFVNKGLNTDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 33334444444444444444444444443
No 266
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=86.93 E-value=2.1 Score=24.13 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=18.1
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLV 50 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 50 (104)
...+...+.+|..+...+++.+|.+.+.+|..
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~ 42 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFE 42 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 34445555556666666666666666655543
No 267
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=86.89 E-value=3.3 Score=24.48 Aligned_cols=76 Identities=17% Similarity=0.066 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHH-hC--ChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGE----------YQAASEHYKRTLVLAQD-LG--DRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+....+..+.-.|..|...-+ .+.|...|++|.++++. .. +|..++.+++.-...|.-.+++++|..
T Consensus 120 ~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~ 199 (260)
T 1o9d_A 120 SGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACN 199 (260)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred CchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 334444444445666665532 25788899999999874 33 355555555554555556799999988
Q ss_pred HHHHHHHHH
Q psy10736 84 YHLRHLIIA 92 (104)
Q Consensus 84 ~~~~a~~~~ 92 (104)
..++++.-+
T Consensus 200 lAk~Afd~A 208 (260)
T 1o9d_A 200 LAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877776544
No 268
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=85.81 E-value=2 Score=21.02 Aligned_cols=34 Identities=15% Similarity=-0.003 Sum_probs=26.6
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
.+.-+...|.-.-..|++++|+.+|..+++.+..
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3444556667777789999999999999998764
No 269
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=85.68 E-value=3.3 Score=23.34 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 61 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
.+.-++.+|.++...++|.+|.+.+..|+..+..
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~ 46 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHR 46 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCH
Confidence 4456677777777777777777777777766443
No 270
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=85.38 E-value=2 Score=20.55 Aligned_cols=35 Identities=11% Similarity=-0.072 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 52 (104)
....+..+...|.-.-..|++++|+.+|..+++.+
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l 43 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYL 43 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44455556666666666778888888888877763
No 271
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=85.13 E-value=4 Score=23.74 Aligned_cols=78 Identities=17% Similarity=0.010 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHH-hC--ChHHHHHHHHHHHHHHHHhCChhHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGE----------YQAASEHYKRTLVLAQD-LG--DRAVEAQACYSLGNTYTLLRDYPTAID 83 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~ 83 (104)
+....+..+.-.|..|...-+ .+.|...|++|.++++. .. +|..++.+++.-...|.-.+++++|..
T Consensus 115 ~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~ 194 (234)
T 2br9_A 115 TGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACR 194 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred chHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 334444444445666655432 25788899999999874 32 355555555554555556899999999
Q ss_pred HHHHHHHHHHH
Q psy10736 84 YHLRHLIIAQQ 94 (104)
Q Consensus 84 ~~~~a~~~~~~ 94 (104)
..++++.-+-.
T Consensus 195 lAk~afd~Ai~ 205 (234)
T 2br9_A 195 LAKAAFDDAIA 205 (234)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888765443
No 272
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=85.02 E-value=2.1 Score=20.47 Aligned_cols=19 Identities=16% Similarity=0.022 Sum_probs=9.0
Q ss_pred HHhCChhHHHHHHHHHHHH
Q psy10736 73 TLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 73 ~~~g~~~~A~~~~~~a~~~ 91 (104)
...|++++|+.+|..+++.
T Consensus 24 D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 24 DTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 3344455555555444443
No 273
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=84.79 E-value=5.9 Score=25.42 Aligned_cols=73 Identities=15% Similarity=0.003 Sum_probs=51.9
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH-----hCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH-HHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD-----LGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII-AQQ 94 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~-~~~ 94 (104)
.....+.+-.+|...++..-+...+.. ++-... .-.....+.-++.+|.++...++|.+|.+++..|+.. +..
T Consensus 175 ~l~l~n~L~kiYFkl~~~~lckni~k~-i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 175 LLYLVNKLNNIYFRIESPQLCSNIFKN-FQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHHHHSSCCTTHHHHHHT-HHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH-hccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 344455566778888888888776643 332211 1112345778889999999999999999999999988 653
No 274
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=84.72 E-value=4.3 Score=23.83 Aligned_cols=76 Identities=11% Similarity=-0.000 Sum_probs=49.9
Q ss_pred HHHHHHHHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHH-hC--ChHHHHHHHHHHHHHHHHhCChhHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGE----------YQAASEHYKRTLVLAQD-LG--DRAVEAQACYSLGNTYTLLRDYPTAIDYH 85 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 85 (104)
...+..+.-.|..|...-+ .+.|...|++|.+++.. .. +|..++.+++.-...|.-.+++++|....
T Consensus 118 eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lA 197 (248)
T 3uzd_A 118 ESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLA 197 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred hHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3444444445776665422 36788899999998864 33 45555555555444455689999999988
Q ss_pred HHHHHHHHH
Q psy10736 86 LRHLIIAQQ 94 (104)
Q Consensus 86 ~~a~~~~~~ 94 (104)
++++.-+-.
T Consensus 198 k~Afd~Ai~ 206 (248)
T 3uzd_A 198 KTAFDDAIA 206 (248)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888765543
No 275
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=84.03 E-value=2.6 Score=20.67 Aligned_cols=27 Identities=7% Similarity=-0.060 Sum_probs=15.9
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 67 SLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 67 ~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
..|.-....|++++|+.+|..+++.+.
T Consensus 20 ~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 20 KRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 334444555666666666666666544
No 276
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.97 E-value=3 Score=21.46 Aligned_cols=15 Identities=20% Similarity=0.166 Sum_probs=7.6
Q ss_pred cHHHHHHHHHHHHHH
Q psy10736 37 EYQAASEHYKRTLVL 51 (104)
Q Consensus 37 ~~~~A~~~~~~al~~ 51 (104)
.+++|..+..++|.+
T Consensus 18 ~h~~AF~~Is~AL~~ 32 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNT 32 (116)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 345555555555544
No 277
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.89 E-value=5.9 Score=24.71 Aligned_cols=69 Identities=13% Similarity=-0.060 Sum_probs=47.3
Q ss_pred HHHHHhccHHHHHHHHHHHHHHHHHhC-----------ChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcch
Q psy10736 30 NSHIFLGEYQAASEHYKRTLVLAQDLG-----------DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDR 98 (104)
Q Consensus 30 ~~~~~~~~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 98 (104)
.+.....+.+++++++.+......+.. .......+...++..|...|+..+|..+++++-......++.
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 445566788888888876544332210 112235667788888999999999999999998877766543
No 278
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=83.70 E-value=2.7 Score=20.59 Aligned_cols=13 Identities=8% Similarity=0.171 Sum_probs=5.0
Q ss_pred CChhHHHHHHHHH
Q psy10736 76 RDYPTAIDYHLRH 88 (104)
Q Consensus 76 g~~~~A~~~~~~a 88 (104)
|+.++|+++|++.
T Consensus 33 G~k~~A~~~YkkG 45 (89)
T 3eab_A 33 GQKEQAVEWYKKG 45 (89)
T ss_dssp SSGGGSHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 3333333333333
No 279
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=82.74 E-value=5.6 Score=23.56 Aligned_cols=77 Identities=22% Similarity=0.180 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHhHHHHHHhcc----------HHHHHHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHhCChhHHHHH
Q psy10736 17 DKAAERRANSNLGNSHIFLGE----------YQAASEHYKRTLVLAQDLG--DRAVEAQACYSLGNTYTLLRDYPTAIDY 84 (104)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 84 (104)
+....+..+.-.|..|...-+ .+.|...|++|.+++.... +|..++.+++.-...|.-.+++++|...
T Consensus 141 ~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~l 220 (260)
T 2npm_A 141 SPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDM 220 (260)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred chHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 334444444444666665432 2578889999999982222 3445555555544445568999999999
Q ss_pred HHHHHHHHH
Q psy10736 85 HLRHLIIAQ 93 (104)
Q Consensus 85 ~~~a~~~~~ 93 (104)
.++++.-+-
T Consensus 221 Ak~Afd~Ai 229 (260)
T 2npm_A 221 AKEAFEMAI 229 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888876543
No 280
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=82.58 E-value=4.8 Score=22.70 Aligned_cols=67 Identities=18% Similarity=0.011 Sum_probs=47.2
Q ss_pred HHHhHHHHHHhccHHHHHHHHHHHHHH--HHH----------hCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 25 NSNLGNSHIFLGEYQAASEHYKRTLVL--AQD----------LGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 25 ~~~l~~~~~~~~~~~~A~~~~~~al~~--~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
.+.-+.++....++..|+..++..+.- -+. .-++...-..+.-+|.++...|+.++|+.++..+...
T Consensus 65 ~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 65 KYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 344566888899999999999887621 000 0111222345678899999999999999999888653
No 281
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=82.13 E-value=1.8 Score=21.45 Aligned_cols=25 Identities=20% Similarity=0.353 Sum_probs=11.8
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 68 LGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 68 l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
+|..+...|+++.|+.+|-+|+.++
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3444444455555555444444443
No 282
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=81.07 E-value=6.2 Score=22.96 Aligned_cols=51 Identities=16% Similarity=-0.057 Sum_probs=34.9
Q ss_pred CchhHHHHHHHH-h-CCHHHHHHHHHHhHHHHHH-hccHHHHHHHHHHHHHHHH
Q psy10736 3 VQPNDRLKIARE-F-GDKAAERRANSNLGNSHIF-LGEYQAASEHYKRTLVLAQ 53 (104)
Q Consensus 3 ~~~~~a~~~~~~-~-~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~ 53 (104)
+.|++|.+++.. + +.+|.......|.+..|+. .+++++|....+++.+-+-
T Consensus 151 ~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai 204 (234)
T 2br9_A 151 VAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 204 (234)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 357888888864 3 3345555555555555554 7999999999999877543
No 283
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=81.01 E-value=0.97 Score=21.26 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=15.7
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 67 SLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 67 ~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.+|..+...|+++++..++-+|+..+
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 45555666666666666666665544
No 284
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=80.77 E-value=11 Score=25.51 Aligned_cols=68 Identities=4% Similarity=-0.119 Sum_probs=44.9
Q ss_pred HHHHhHHHHHHhccHHHHHHHHHHHHHHHHHh--------CC--------hHHHHHHHHHHHHHHHHhCChhHHHHHHHH
Q psy10736 24 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL--------GD--------RAVEAQACYSLGNTYTLLRDYPTAIDYHLR 87 (104)
Q Consensus 24 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--------~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 87 (104)
.+...+......|+++.|...|++++...... .. ......++...+......|+.+.|...|.+
T Consensus 380 Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~ 459 (679)
T 4e6h_A 380 LAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGK 459 (679)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34556677778899999999999999864211 10 001223444555556667788888888888
Q ss_pred HHHH
Q psy10736 88 HLII 91 (104)
Q Consensus 88 a~~~ 91 (104)
|++.
T Consensus 460 A~~~ 463 (679)
T 4e6h_A 460 CRRL 463 (679)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8754
No 285
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=80.69 E-value=2 Score=27.75 Aligned_cols=37 Identities=11% Similarity=0.019 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcchh
Q psy10736 63 QACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 63 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 99 (104)
.++..+|++......+..|..+|.+|..+....|.+.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~ 189 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPY 189 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchH
Confidence 4677899999999999999999999999988887764
No 286
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.33 E-value=13 Score=26.17 Aligned_cols=68 Identities=12% Similarity=0.010 Sum_probs=50.4
Q ss_pred HHhHHHHHHhccHHHHHHHHHHHHHHH-----------------HHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 26 SNLGNSHIFLGEYQAASEHYKRTLVLA-----------------QDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 26 ~~l~~~~~~~~~~~~A~~~~~~al~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
+-+|.++...|++++|..+|+++-... ...........-|..+..++...+.++-++++.+.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 678999999999999999998754211 111111223346678888889999999999999999
Q ss_pred HHHHH
Q psy10736 89 LIIAQ 93 (104)
Q Consensus 89 ~~~~~ 93 (104)
+....
T Consensus 924 I~~~~ 928 (950)
T 4gq2_M 924 DASKE 928 (950)
T ss_dssp HHTCC
T ss_pred Hhhcc
Confidence 97653
No 287
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=78.44 E-value=4.3 Score=25.74 Aligned_cols=34 Identities=21% Similarity=0.067 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
....+...++.+|...|+|++|..+.++++....
T Consensus 188 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~~ 221 (454)
T 3myv_A 188 NKYAARALLARIYLYHDDNRKAFDLADQLIKDAD 221 (454)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCCC
Confidence 3456788899999999999999999999997543
No 288
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=78.15 E-value=6.8 Score=21.74 Aligned_cols=45 Identities=18% Similarity=0.044 Sum_probs=30.4
Q ss_pred HHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 33 IFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 33 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
...|+++.|.+..++ .++. ..+..+|..-...|+++-|+++|+++
T Consensus 16 L~lg~l~~A~e~a~~-------l~~~----~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 16 LEYGNLDAALDEAKK-------LNDS----ITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHTTCHHHHHHHHHH-------HCCH----HHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHH-------hCCH----HHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 456777877776543 2222 35667788888888888888877765
No 289
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=77.87 E-value=17 Score=26.30 Aligned_cols=65 Identities=6% Similarity=-0.216 Sum_probs=48.1
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCh-hHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDY-PTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~a~~~ 91 (104)
..+|+.+-..+...|+.++|.+.+.+.. ..|-.+. ..+|+.+-..+...|+. ++|.+.++++.+.
T Consensus 165 vvTYNtLI~Glck~G~~~eA~~Lf~eM~----~~G~~PD-vvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 165 LDMYNAVMLGWARQGAFKELVYVLFMVK----DAGLTPD-LLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH----HTTCCCC-HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCCHHHHHHHHHHHH----HcCCCCc-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 4578888889999999999999998864 3333222 25566666678888874 7888999888754
No 290
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.45 E-value=11 Score=23.58 Aligned_cols=70 Identities=7% Similarity=0.024 Sum_probs=52.1
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRA--VEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..+...++..|...++.+.|..+++++-......++.. .....+...+..+...+++..+-..+-.++..
T Consensus 127 l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 127 LLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 44556677888889999999999999998888876643 44556666677778888888766665555543
No 291
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=77.27 E-value=5 Score=25.48 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
....++..++.+|...|+|++|....++++....
T Consensus 194 tk~aa~allArvyL~~~~~~~A~~~a~~vi~~~~ 227 (461)
T 3kez_A 194 NRWAAMTLLSRVYLYKGEYNEALTMAENAIKGAE 227 (461)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Confidence 3456788889999999999999999999987543
No 292
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=77.17 E-value=5.9 Score=25.47 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
....+...++.+|...++|++|..+.++++..
T Consensus 201 tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 201 DNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34567888999999999999999999999864
No 293
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=76.74 E-value=5.2 Score=25.48 Aligned_cols=31 Identities=10% Similarity=-0.057 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
....+...++.+|...++|++|..+.++++.
T Consensus 189 tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 189 NTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3466888899999999999999999999875
No 294
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=75.97 E-value=7.6 Score=21.21 Aligned_cols=54 Identities=9% Similarity=0.004 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 39 QAASEHYKRTLVLAQDLGD--RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 39 ~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
+.-++.|++++........ -..-+..+...+.. ...+|.++|.+.|+.++.+.+
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hK 91 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCK 91 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhH
Confidence 7777888888765432211 11223344444433 556899999999999987633
No 295
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=73.64 E-value=12 Score=22.37 Aligned_cols=56 Identities=16% Similarity=0.095 Sum_probs=36.1
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Q psy10736 32 HIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 93 (104)
Q Consensus 32 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 93 (104)
....|+++++++.....+.- +..| +.....+-..+...|+|+.|...++.+.++..
T Consensus 7 ll~~g~L~~al~~~~~~VR~--~P~d----a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p 62 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKA--SPKD----ASLRSSFIELLCIDGDFERADEQLMQSIKLFP 62 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHT--CTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCG
T ss_pred HHhCCCHHHHHHHHHHHHHh--CCcC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Confidence 34557788887766654332 1112 34456666778888999999888887776543
No 296
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A
Probab=67.95 E-value=20 Score=22.51 Aligned_cols=43 Identities=9% Similarity=-0.055 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcchhhc
Q psy10736 59 AVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGE 101 (104)
Q Consensus 59 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 101 (104)
.....-+++++.-++..|++++|.-++-.++-+......|...
T Consensus 95 ~~~~~ky~~~A~~~~~~g~~~~A~~~LG~a~Hy~~D~~~P~Ha 137 (370)
T 2wxu_A 95 ESQIRKFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHP 137 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTSSTTT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCCCCccc
Confidence 3445678899999999999999999999999999888877655
No 297
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=67.83 E-value=17 Score=21.70 Aligned_cols=49 Identities=16% Similarity=0.087 Sum_probs=34.4
Q ss_pred CchhHHHHHHHH-h---CCHHHHHHHHHHhHHHHH-HhccHHHHHHHHHHHHHH
Q psy10736 3 VQPNDRLKIARE-F---GDKAAERRANSNLGNSHI-FLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 3 ~~~~~a~~~~~~-~---~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~ 51 (104)
+.|++|.+++.. + +.+|.......|.+..|+ ..+++++|....++|.+-
T Consensus 173 ~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 173 EFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 357888888853 3 334555555566666655 568999999999998776
No 298
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=67.04 E-value=12 Score=23.80 Aligned_cols=32 Identities=19% Similarity=0.055 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
....++..++.+|...|+|++|...+++++..
T Consensus 200 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 200 NYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 34567888999999999999999999998864
No 299
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=66.40 E-value=11 Score=24.76 Aligned_cols=48 Identities=15% Similarity=0.092 Sum_probs=35.7
Q ss_pred hhHHHHHHHHhC------CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHH
Q psy10736 5 PNDRLKIAREFG------DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 5 ~~~a~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 52 (104)
|.+|..+..... .....+..++.+|.++...++|.+|.+++..|+..+
T Consensus 247 y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 247 VDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp STTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 455555554442 234557788899999999999999999999987644
No 300
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3
Probab=66.14 E-value=22 Score=22.33 Aligned_cols=43 Identities=12% Similarity=-0.021 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcchhhc
Q psy10736 59 AVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGE 101 (104)
Q Consensus 59 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 101 (104)
.....-+++++.-++..|++++|.-++-.++-+......|...
T Consensus 95 ~~~~~ky~~~A~~~~~~g~~~~A~~~LG~a~Hy~~D~~~P~Ha 137 (370)
T 1olp_A 95 ESQTRKFATLAKNEWDKGNYEKAAWYLGQGMHYFGDLNTPYHA 137 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCCCCccc
Confidence 3445678888999999999999999999999998888777654
No 301
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=65.72 E-value=18 Score=21.40 Aligned_cols=49 Identities=14% Similarity=-0.030 Sum_probs=33.6
Q ss_pred chhHHHHHHHH-h-CCHHHHHHHHHHhHHHHHH-hccHHHHHHHHHHHHHHH
Q psy10736 4 QPNDRLKIARE-F-GDKAAERRANSNLGNSHIF-LGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 4 ~~~~a~~~~~~-~-~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~ 52 (104)
.|++|.+++.. + +.+|.......|.+..|+. .+++++|....+++.+-+
T Consensus 157 aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 157 AYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 57888888864 3 3345555555555555555 699999999988877654
No 302
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=65.09 E-value=22 Score=22.15 Aligned_cols=36 Identities=11% Similarity=0.001 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhc
Q psy10736 61 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLM 96 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 96 (104)
.+.+++..|......+++.+++.+++.+.+..+...
T Consensus 256 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 291 (392)
T 1zb1_A 256 KSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISSL 291 (392)
T ss_dssp HHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 345677778888889999999999999998777654
No 303
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=63.84 E-value=24 Score=23.65 Aligned_cols=51 Identities=8% Similarity=-0.007 Sum_probs=37.5
Q ss_pred HHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 33 IFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 33 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
...|+++.|..++.+.-. .........+.+|..+...|+.++|..+|+++.
T Consensus 296 lr~~d~~~a~~~~~~l~~------~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 296 LGTGDRRGLNTWLARLPM------EAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp HHHTCHHHHHHHHHHSCT------TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHccc------cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 345888888887754322 122345667889999999999999999998875
No 304
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=63.45 E-value=16 Score=23.34 Aligned_cols=31 Identities=16% Similarity=0.097 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 61 EAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
...+...++.+|...|++++|..++++++..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4667888999999999999999999999864
No 305
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=63.29 E-value=20 Score=23.34 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 61 EAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
...++..++.++...++|++|...+++++.
T Consensus 197 k~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 197 KQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 456788889999999999999999999886
No 306
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=63.02 E-value=25 Score=22.53 Aligned_cols=15 Identities=7% Similarity=0.080 Sum_probs=9.4
Q ss_pred cHHHHHHHHHHHHHH
Q psy10736 37 EYQAASEHYKRTLVL 51 (104)
Q Consensus 37 ~~~~A~~~~~~al~~ 51 (104)
+.+.|...++.++..
T Consensus 335 d~~~ar~ife~al~~ 349 (493)
T 2uy1_A 335 SRATPYNIFSSGLLK 349 (493)
T ss_dssp CSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 466666666666553
No 307
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=62.41 E-value=28 Score=22.40 Aligned_cols=37 Identities=8% Similarity=0.007 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH-HHH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL-AQD 54 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-~~~ 54 (104)
....+...+.+|..+...+++.+|.+++..|+.. +..
T Consensus 216 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 216 LDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred ccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 4567788999999999999999999999999988 553
No 308
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.57 E-value=43 Score=24.16 Aligned_cols=67 Identities=12% Similarity=-0.015 Sum_probs=47.7
Q ss_pred HHhHHHHHHhccHHHHHHHHHHHHHHHHH-----------------hCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 26 SNLGNSHIFLGEYQAASEHYKRTLVLAQD-----------------LGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 26 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
+-+|.++...|++++|.++|+++...... .........-|..+..++...+.++.++++.+.|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 67899999999999999999886321110 0001112234667777888889999999999999
Q ss_pred HHHH
Q psy10736 89 LIIA 92 (104)
Q Consensus 89 ~~~~ 92 (104)
++..
T Consensus 926 i~~~ 929 (1139)
T 4fhn_B 926 DASK 929 (1139)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8754
No 309
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=60.96 E-value=15 Score=20.10 Aligned_cols=25 Identities=24% Similarity=0.252 Sum_probs=19.9
Q ss_pred chhHHHHHHHHhCCHHHHHHHHHHh
Q psy10736 4 QPNDRLKIAREFGDKAAERRANSNL 28 (104)
Q Consensus 4 ~~~~a~~~~~~~~~~~~~~~~~~~l 28 (104)
-+++|+++++.++|+..+..++...
T Consensus 88 ~~~eAlDiA~~L~D~qLilyAl~K~ 112 (161)
T 2ynq_A 88 QSEEALELARTIEDRDLIVYALLKY 112 (161)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred chHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4678899999999888887777654
No 310
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=60.95 E-value=17 Score=23.45 Aligned_cols=31 Identities=10% Similarity=-0.041 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
....+...++.+|...++|++|...+++++.
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788899999999999999999999885
No 311
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=60.20 E-value=17 Score=20.57 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=27.3
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
...-..+..+|..+...|+.++|+.++..+..+
T Consensus 111 ~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 111 GDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp TCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 344567888999999999999999999987653
No 312
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=59.91 E-value=25 Score=20.89 Aligned_cols=49 Identities=20% Similarity=0.173 Sum_probs=33.1
Q ss_pred chhHHHHHHHHhC-CHHHHHHHHHHhHHHHHH-hccHHHHHHHHHHHHHHH
Q psy10736 4 QPNDRLKIAREFG-DKAAERRANSNLGNSHIF-LGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 4 ~~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~ 52 (104)
.|++|.+++..+. .+|.......|.+..|+. .+++++|....+++.+-+
T Consensus 178 aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 228 (260)
T 2npm_A 178 AYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMA 228 (260)
T ss_dssp HHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 5788888882233 234555555555555555 799999999999987754
No 313
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=59.66 E-value=35 Score=22.49 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHh
Q psy10736 38 YQAASEHYKRTLVLAQDLG--DRAVEAQACYSLGNTYTLL 75 (104)
Q Consensus 38 ~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~ 75 (104)
-..|+++|++|++.+++.. +......-+.+++..|...
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~a 487 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMA 487 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhc
Confidence 4678888888888888764 3333444444444444433
No 314
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=58.98 E-value=11 Score=25.09 Aligned_cols=47 Identities=13% Similarity=0.073 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 44 HYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 44 ~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
-.++++.++.+.+-+...-.++..+|.-....|+.-+|+.+|-+|-.
T Consensus 518 d~e~vL~iCa~l~L~~~ar~I~k~~g~k~l~~g~~geAL~~f~rA~~ 564 (570)
T 3f3f_C 518 DIEWMLSICVEWRLPEIAKEIYTTLGNQMLSAHNIIESIANFSRAGK 564 (570)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHHHHHCccHHHHHHHHHHcCC
Confidence 45677778888888877778888888888888887788888777643
No 315
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=57.86 E-value=7.8 Score=18.81 Aligned_cols=29 Identities=14% Similarity=0.021 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
..+..+..=|.-|...||+-.|+.++.=+
T Consensus 33 ~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 33 RNIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34566666677778888888777765443
No 316
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=57.18 E-value=22 Score=19.43 Aligned_cols=37 Identities=5% Similarity=0.091 Sum_probs=27.7
Q ss_pred HHHHH-HHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC
Q psy10736 21 ERRAN-SNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD 57 (104)
Q Consensus 21 ~~~~~-~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 57 (104)
.+.+. ...|..+...|+...|...+.+++..+.....
T Consensus 73 qGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~ 110 (161)
T 2ijq_A 73 HGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPN 110 (161)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCC
Confidence 34444 44566778889999999999999998766543
No 317
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=57.10 E-value=35 Score=21.70 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=29.0
Q ss_pred HHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10736 25 NSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL 74 (104)
Q Consensus 25 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 74 (104)
+......+...+.++.|+..++..+..++...|-..++.++..++.+|..
T Consensus 91 l~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls~~~~~~a~~y~~ 140 (428)
T 2wm9_A 91 LEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTLHRAYSK 140 (428)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 33333344444566777777777777766666655555665555555543
No 318
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=56.88 E-value=36 Score=21.83 Aligned_cols=46 Identities=7% Similarity=-0.148 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 40 AASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 40 ~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
.....|++++..... . ...+...+..+...|+.++|...|++++..
T Consensus 197 Rv~~~ye~al~~~p~---~---~~lW~~ya~~~~~~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 197 RMHFIHNYILDSFYY---A---EEVYFFYSEYLIGIGQKEKAKKVVERGIEM 242 (493)
T ss_dssp HHHHHHHHHHHHTTT---C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC---C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 345566666654321 1 344556677778889999999999999876
No 319
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=56.65 E-value=31 Score=21.00 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 16 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
|+--...+.+..+.+=|...+++++|++.+......+-+.+.....+.....+-.+|...+..- ..+...+..++...
T Consensus 27 G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~-~~~~~~rl~~l~~~ 104 (312)
T 2wpv_A 27 GDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKV-DDISVARLVRLIAE 104 (312)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCC-SHHHHHHHHHHHTT
T ss_pred cChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHH
Confidence 4555556666666666777777888888777766666666655544455555556666554321 23344444444443
No 320
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=54.64 E-value=28 Score=22.47 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=38.9
Q ss_pred chhHHHHHHHHhC-CHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhC
Q psy10736 4 QPNDRLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG 56 (104)
Q Consensus 4 ~~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 56 (104)
.|.+|+..++..= +.. ..-|..+|-.+.+.+++.+|++++-.+-++.+..+
T Consensus 286 Lf~~AI~~ar~~Y~~~h--vYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~Yn 337 (489)
T 4gq4_A 286 LYHKGIASAKTYYRDEH--IYPYMYLAGYHCRNRNVREALQAWADTATVIQDYN 337 (489)
T ss_dssp HHHHHHHHHHHHSTTCC--SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhcccCc--ccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcc
Confidence 4677887776552 322 45678889999999999999999999988876543
No 321
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=53.74 E-value=31 Score=20.06 Aligned_cols=49 Identities=12% Similarity=-0.056 Sum_probs=33.2
Q ss_pred chhHHHHHHHHh--CCHHHHHHHHHHhHHHH-HHhccHHHHHHHHHHHHHHH
Q psy10736 4 QPNDRLKIAREF--GDKAAERRANSNLGNSH-IFLGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 4 ~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~~~ 52 (104)
.|++|.+++... +.+|.......|.+..| -..+++++|....+++.++.
T Consensus 147 aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 147 IHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 578888888752 22333444445555554 45689999999999998864
No 322
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=53.25 E-value=42 Score=21.46 Aligned_cols=42 Identities=12% Similarity=-0.122 Sum_probs=21.8
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHH
Q psy10736 32 HIFLGEYQAASEHYKRTLVLAQDL-GDRAVEAQACYSLGNTYT 73 (104)
Q Consensus 32 ~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~ 73 (104)
+...+.|+.|+..++..+...... -|-..++.++..++.+|.
T Consensus 102 f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~ 144 (436)
T 2yin_A 102 FDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYE 144 (436)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333345566666666655555553 444444555555555444
No 323
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=52.74 E-value=32 Score=20.07 Aligned_cols=49 Identities=14% Similarity=0.085 Sum_probs=33.1
Q ss_pred chhHHHHHHHH-hC-CHHHHHHHHHHhHHHHH-HhccHHHHHHHHHHHHHHH
Q psy10736 4 QPNDRLKIARE-FG-DKAAERRANSNLGNSHI-FLGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 4 ~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~ 52 (104)
.|++|.+++.. ++ .+|.......|.+..|+ ..+++++|....+++.+-+
T Consensus 155 aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~A 206 (236)
T 3iqu_A 155 AYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEA 206 (236)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 57788888763 33 33444555555555555 5689999999999887654
No 324
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=52.72 E-value=55 Score=22.70 Aligned_cols=58 Identities=16% Similarity=-0.029 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHHHHHHHH----hC--C------hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q psy10736 37 EYQAASEHYKRTLVLAQD----LG--D------RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 37 ~~~~A~~~~~~al~~~~~----~~--~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 94 (104)
+--+|+....++++-... .. + .+.....+...+..+..+|+++-|+...++|..++..
T Consensus 300 ~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs 369 (754)
T 4gns_B 300 KELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALD 369 (754)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCch
Confidence 445677777776643211 11 1 0112234555677788899999999999999876543
No 325
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=51.66 E-value=12 Score=23.94 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 61 EAQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
...+...++.+|...+++++|...+++.+.
T Consensus 179 k~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 179 QGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 456778899999999999999998887753
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=51.59 E-value=13 Score=26.09 Aligned_cols=25 Identities=12% Similarity=0.058 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 65 CYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 65 ~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
.+.+|.++...|++++|..+|+++-
T Consensus 843 ~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 843 VYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 4789999999999999999998764
No 327
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=50.96 E-value=42 Score=20.89 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
+.+++..|......+++.+++.+++.|.+..+..
T Consensus 275 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 308 (380)
T 3c3r_A 275 ANAEYHQSILAKQQKKFGEEIARLQHAAELIKTV 308 (380)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 4566777888888899999999999998877654
No 328
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=50.86 E-value=23 Score=17.82 Aligned_cols=35 Identities=9% Similarity=-0.013 Sum_probs=26.4
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
+.++.+..-+.-....|+|++|.+.+.++-+.+.+
T Consensus 18 G~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~ 52 (105)
T 2e2a_A 18 GDARSKLLEALKAAENGDFAKADSLVVEAGSCIAE 52 (105)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 44566666677788889999999999888775543
No 329
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=50.49 E-value=37 Score=20.02 Aligned_cols=50 Identities=12% Similarity=-0.049 Sum_probs=33.7
Q ss_pred chhHHHHHHHH-hC-CHHHHHHHHHHhHHHHHH-hccHHHHHHHHHHHHHHHH
Q psy10736 4 QPNDRLKIARE-FG-DKAAERRANSNLGNSHIF-LGEYQAASEHYKRTLVLAQ 53 (104)
Q Consensus 4 ~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~ 53 (104)
.|++|.+++.. +. .+|.......|.+..|+. .+++++|....+++.+-+-
T Consensus 153 aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai 205 (248)
T 3uzd_A 153 AYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAI 205 (248)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 57788888763 33 234444455555555554 6899999999999877654
No 330
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=49.99 E-value=27 Score=18.36 Aligned_cols=17 Identities=12% Similarity=0.044 Sum_probs=8.9
Q ss_pred ccHHHHHHHHHHHHHHH
Q psy10736 36 GEYQAASEHYKRTLVLA 52 (104)
Q Consensus 36 ~~~~~A~~~~~~al~~~ 52 (104)
++.+++..++.+|...+
T Consensus 4 ~~~ee~~~wl~~A~~dl 20 (141)
T 3o10_A 4 GNPVEARRWLRQARANF 20 (141)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhh
Confidence 34555555555554443
No 331
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=49.99 E-value=24 Score=17.71 Aligned_cols=35 Identities=11% Similarity=0.169 Sum_probs=26.3
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 54 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 54 (104)
+.++.+..-+.-....|++++|.+.++++-+.+.+
T Consensus 16 G~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~ 50 (103)
T 1wcr_A 16 GQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNE 50 (103)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 44556666677788889999999999888775543
No 332
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=49.81 E-value=3.4 Score=24.38 Aligned_cols=27 Identities=15% Similarity=-0.006 Sum_probs=0.0
Q ss_pred HHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 25 NSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 25 ~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
+...|.-.-..|++++|+.+|..+++.
T Consensus 26 lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 26 VLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 444444445555666666666665544
No 333
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=49.44 E-value=39 Score=20.08 Aligned_cols=49 Identities=14% Similarity=-0.069 Sum_probs=33.3
Q ss_pred chhHHHHHHHH-hC-CHHHHHHHHHHhHHHHHH-hccHHHHHHHHHHHHHHH
Q psy10736 4 QPNDRLKIARE-FG-DKAAERRANSNLGNSHIF-LGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 4 ~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~ 52 (104)
.|++|.+++.. +. ..|.......|.+..|.. .+++++|....++|.+-+
T Consensus 178 aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~A 229 (261)
T 3ubw_A 178 AYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 229 (261)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 57788887753 33 234455555555555555 699999999999987754
No 334
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=49.43 E-value=41 Score=20.31 Aligned_cols=54 Identities=7% Similarity=-0.063 Sum_probs=38.9
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL 74 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 74 (104)
.+..+.|++.......+.+++.....-...+.+...+....-+++..+|.+.+.
T Consensus 211 ~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~~~~d~EalyR~LvALGtL~~~ 264 (304)
T 3ebb_A 211 LATLALNYSVCFHKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVALGTLISD 264 (304)
T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhC
Confidence 456688888887777777777777666666666666776667777788877654
No 335
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=48.59 E-value=47 Score=20.68 Aligned_cols=36 Identities=17% Similarity=-0.029 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
..+.+++..|......+++.+++..++.+.+..+..
T Consensus 251 ~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a 286 (376)
T 3r9m_A 251 YTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKA 286 (376)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 346678888888888999999999998888776643
No 336
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=47.96 E-value=43 Score=21.24 Aligned_cols=32 Identities=13% Similarity=0.078 Sum_probs=26.7
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 52 (104)
...+..-++.+|...+++++|..+.++++...
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 44567778899999999999999999988653
No 337
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=47.03 E-value=45 Score=21.28 Aligned_cols=31 Identities=23% Similarity=0.203 Sum_probs=26.0
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
...++.-++.+|...+++++|..+.++.+..
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4556777889999999999999999998764
No 338
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=46.93 E-value=33 Score=18.51 Aligned_cols=30 Identities=7% Similarity=-0.054 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
+..+..-|..+...|++.+|.+.|+..++.
T Consensus 101 AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 101 SPLYIAWAGHLEAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 344556677888999999999999998864
No 339
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=46.72 E-value=46 Score=21.46 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=26.6
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
....++.-++.+|...+++++|..+.++++..
T Consensus 201 tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 201 DNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34556777899999999999999999998764
No 340
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=46.67 E-value=16 Score=23.13 Aligned_cols=28 Identities=18% Similarity=0.062 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHL 89 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 89 (104)
..+...++.+|...|+|++|..++++++
T Consensus 201 ~aA~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 201 AAANMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 4577788999999999999999998876
No 341
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=46.55 E-value=46 Score=21.18 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=26.6
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVLA 52 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 52 (104)
...++.-++.+|...|++++|..+.++.+...
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~~~ 226 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIKGA 226 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 45567778899999999999999999988753
No 342
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=46.24 E-value=55 Score=20.87 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=38.6
Q ss_pred chhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC
Q psy10736 4 QPNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD 57 (104)
Q Consensus 4 ~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 57 (104)
.|.+|+..++.. +|.. ..-|..+|..+++.+++.+|+.+.-.+-++.++.+.
T Consensus 279 L~~~AI~sa~~yY~n~H--vYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY 331 (472)
T 3re2_A 279 LFKEAITVAKREYSDHH--IYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNY 331 (472)
T ss_dssp HHHHHHHHHHHHSTTCC--SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHhccCC--ccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCC
Confidence 467777776654 3322 334677888999999999999999999888776543
No 343
>2awi_A PRGX; repressor, pheromone, DNA binding, regulatory domain, transcription; 2.25A {Enterococcus faecalis} SCOP: a.35.1.11 a.118.8.4 PDB: 2axv_A 2axu_A 2aw6_A 2axz_A 2grl_A 2grm_A
Probab=45.82 E-value=47 Score=19.92 Aligned_cols=76 Identities=9% Similarity=-0.144 Sum_probs=41.1
Q ss_pred HHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhcchh
Q psy10736 24 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD---RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 24 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 99 (104)
.+.++...+...++++.|..+......+.....+ -.......+.-+......++-.++.....+++.+++..|.+.
T Consensus 193 ~llN~l~~~i~~~~~~~a~~~l~~l~~l~~~~~~~~~~~~k~~~~y~~~~~~~~~~~~~~~~~~~~~~i~il~~lg~~~ 271 (317)
T 2awi_A 193 VLKNALTISIMNRNLKEAQYYINQFEHLKTIKNISINGYYDLEINYLKQIYQFLTDKNIDSYLNAVNIINIFKIIGKED 271 (317)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHHHCBHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCHH
Confidence 3556666777889998887666655444333222 222222222223333333333455666677777777777653
No 344
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=45.52 E-value=32 Score=23.00 Aligned_cols=19 Identities=11% Similarity=-0.181 Sum_probs=9.1
Q ss_pred HHHHHhCChhHHHHHHHHH
Q psy10736 70 NTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 70 ~~~~~~g~~~~A~~~~~~a 88 (104)
.+....|-.+.|...++..
T Consensus 524 ~iCa~l~L~~~ar~I~k~~ 542 (570)
T 3f3f_C 524 SICVEWRLPEIAKEIYTTL 542 (570)
T ss_dssp HHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHCCChHHHHHHHHHH
Confidence 3344445555555554443
No 345
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=45.32 E-value=34 Score=18.22 Aligned_cols=32 Identities=13% Similarity=-0.007 Sum_probs=27.5
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ 53 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 53 (104)
+..+...|..|..-|+.+.|.-.|.+...++-
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 45577779999999999999999999888874
No 346
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=45.14 E-value=67 Score=21.49 Aligned_cols=18 Identities=6% Similarity=-0.219 Sum_probs=8.6
Q ss_pred hhHHHHHHHHhCCHHHHH
Q psy10736 5 PNDRLKIAREFGDKAAER 22 (104)
Q Consensus 5 ~~~a~~~~~~~~~~~~~~ 22 (104)
++.|...+.+.+|.....
T Consensus 697 ~~~A~~~y~~~~d~~~l~ 714 (814)
T 3mkq_A 697 FKLAIEAFTNAHDLESLF 714 (814)
T ss_dssp HHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHccChhhhH
Confidence 344555555555544433
No 347
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=43.85 E-value=39 Score=18.47 Aligned_cols=30 Identities=17% Similarity=0.108 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
+..|..-|..+...|++.+|.+.|+.+++.
T Consensus 96 AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 96 AQFYISWAEEYEARENFRKADAIFQEGIQQ 125 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 445556677788899999999999988854
No 348
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=43.65 E-value=32 Score=17.43 Aligned_cols=34 Identities=12% Similarity=0.009 Sum_probs=25.5
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ 53 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 53 (104)
+.++.+..-+.-....|+|++|.+.++++-+.+.
T Consensus 20 G~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l~ 53 (109)
T 3k1s_A 20 GNARSFAMEALQFAKQGKMAEADEAMVKAKEAIN 53 (109)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3455566666777888999999999998876554
No 349
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=43.19 E-value=56 Score=20.88 Aligned_cols=31 Identities=19% Similarity=0.119 Sum_probs=26.3
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLVL 51 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 51 (104)
...+..-++.+|...+++++|..+.++.+..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4556777889999999999999999998864
No 350
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=42.93 E-value=48 Score=19.20 Aligned_cols=29 Identities=7% Similarity=-0.094 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 63 QACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 63 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
..|..-+..+...|++.+|...|+..++-
T Consensus 151 lfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 151 IFYEEYANYFESRGLFQKADEVYQKGKRM 179 (223)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34556677788999999999999998864
No 351
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=42.66 E-value=68 Score=20.91 Aligned_cols=52 Identities=15% Similarity=0.109 Sum_probs=38.7
Q ss_pred chhHHHHHHHHh-CCHHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC
Q psy10736 4 QPNDRLKIAREF-GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD 57 (104)
Q Consensus 4 ~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 57 (104)
.|.+|+..++.. +|.. ..-|..+|.++++.+++.+|+.+.-.+-++.++.+.
T Consensus 301 L~~~AI~sa~~~Y~n~H--vYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY 353 (550)
T 3u84_A 301 LYHKGIASAKTYYRDEH--IYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNY 353 (550)
T ss_dssp HHHHHHHHHHHHSTTCC--SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHhccCC--ccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCC
Confidence 467777776654 2322 334777888999999999999999999888776543
No 352
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=41.90 E-value=37 Score=17.59 Aligned_cols=34 Identities=9% Similarity=-0.044 Sum_probs=22.9
Q ss_pred HHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHH
Q psy10736 20 AERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ 53 (104)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 53 (104)
+.++.+..-+.-....|+|++|.+.++++-+.+.
T Consensus 35 G~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l~ 68 (120)
T 3l8r_A 35 GNARSIVHEAFDAMREKNYILAEQKLQEANDELL 68 (120)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3345555556666777888888888887766543
No 353
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=40.26 E-value=45 Score=18.16 Aligned_cols=29 Identities=14% Similarity=0.073 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 90 (104)
+..+..++.+|...|+..+|.+.+.+|.+
T Consensus 125 ~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 125 ASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 45678899999999999999999988864
No 354
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=38.69 E-value=55 Score=18.65 Aligned_cols=30 Identities=3% Similarity=-0.287 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy10736 62 AQACYSLGNTYTLLRDYPTAIDYHLRHLII 91 (104)
Q Consensus 62 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 91 (104)
+..|-.-|..+...|++.+|.+.|+..++-
T Consensus 115 AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~ 144 (202)
T 3esl_A 115 SLFYEEFSKLLENAQFFLEAKVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 455666788889999999999999998853
No 355
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=38.64 E-value=62 Score=20.79 Aligned_cols=32 Identities=19% Similarity=-0.042 Sum_probs=24.0
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHHHHhcchh
Q psy10736 68 LGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRV 99 (104)
Q Consensus 68 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 99 (104)
-|......||++.|...++.+..++.+.|+..
T Consensus 388 ~a~~~~~~gd~~~A~~~L~~A~~~~~~~g~~~ 419 (464)
T 4fx5_A 388 EGLDAQAAGDLDTATARLGRAMDLAVESGHED 419 (464)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 34556677888888888888888888777653
No 356
>3s0r_A De novo designed helical assembly; interacts with single walled nanotube (SWNT), de novo protei; 2.45A {Artificial gene}
Probab=37.84 E-value=19 Score=13.07 Aligned_cols=13 Identities=23% Similarity=0.153 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHH
Q psy10736 39 QAASEHYKRTLVL 51 (104)
Q Consensus 39 ~~A~~~~~~al~~ 51 (104)
+.|++|.+++++.
T Consensus 4 esaleyaqqalek 16 (30)
T 3s0r_A 4 ESALEYAQQALEK 16 (30)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHH
Confidence 4566666666654
No 357
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=36.86 E-value=57 Score=20.82 Aligned_cols=30 Identities=10% Similarity=0.172 Sum_probs=25.7
Q ss_pred HHHHHHHhHHHHHHhccHHHHHHHHHHHHH
Q psy10736 21 ERRANSNLGNSHIFLGEYQAASEHYKRTLV 50 (104)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 50 (104)
...++.-++.+|...+++++|..+.++++.
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 455777889999999999999999998875
No 358
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=36.80 E-value=51 Score=21.40 Aligned_cols=32 Identities=13% Similarity=-0.002 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHh--------CChhHHHHHHHHHHH
Q psy10736 59 AVEAQACYSLGNTYTLL--------RDYPTAIDYHLRHLI 90 (104)
Q Consensus 59 ~~~~~~~~~l~~~~~~~--------g~~~~A~~~~~~a~~ 90 (104)
.....++..++.+|... +++++|...+++.+.
T Consensus 193 ~tk~aA~allarvyL~~a~~~~~~~~~~~~A~~~a~~vi~ 232 (535)
T 3ihv_A 193 FSKGAALGLLTKVYATWAGYPVKDESKWEAAAKTARILVE 232 (535)
T ss_dssp CCHHHHHHHHHHHHHHHHSTTTCCTTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHccCCcccCHHHHHHHHHHHHHHHh
Confidence 34456777888888876 578999999988875
No 359
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=35.40 E-value=29 Score=15.78 Aligned_cols=15 Identities=13% Similarity=-0.075 Sum_probs=11.3
Q ss_pred HhCChhHHHHHHHHH
Q psy10736 74 LLRDYPTAIDYHLRH 88 (104)
Q Consensus 74 ~~g~~~~A~~~~~~a 88 (104)
..||+++|+.++++-
T Consensus 34 ~~GDi~~Ai~~Lr~k 48 (64)
T 2cp9_A 34 CGGDLKQAEIWLHKE 48 (64)
T ss_dssp HTSCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHH
Confidence 457888888888753
No 360
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=35.26 E-value=53 Score=17.52 Aligned_cols=37 Identities=8% Similarity=-0.037 Sum_probs=30.2
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCCh
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDR 58 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 58 (104)
+..+...|..|..-||.+.|.-.+.+...++......
T Consensus 42 a~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kIpkH 78 (144)
T 2a9u_A 42 ALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLIKKR 78 (144)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 4456677899999999999999999999888765543
No 361
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=34.62 E-value=82 Score=19.49 Aligned_cols=76 Identities=9% Similarity=-0.043 Sum_probs=48.2
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
-...+.+..+.+=|...+++++|++.+......+-+.+.....+.....+-.+|...+-.- ..+...+.+++....
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~-~~~~~~rL~~L~~~~ 107 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRV-DGASRGKLLGCLRLF 107 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHhC
Confidence 4556667777777777888888888888777776666665555555556667776665321 124455555555444
No 362
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=33.91 E-value=47 Score=21.26 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHhC---------ChhHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLR---------DYPTAIDYHLRHLI 90 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g---------~~~~A~~~~~~a~~ 90 (104)
....+...++.+|...+ ++++|...+++++.
T Consensus 186 tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 186 SMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp CHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 34567888899998887 89999999888875
No 363
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=33.61 E-value=86 Score=19.43 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
..+.+++..|......+++.+++.+++.+.+..+..
T Consensus 250 ~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 285 (363)
T 3rau_A 250 FAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEA 285 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 345667777888888889999999888888766543
No 364
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=33.01 E-value=67 Score=19.91 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=26.5
Q ss_pred HHHHhHHHHHHhccHHHHHHHHHHHHHHHH-HhC
Q psy10736 24 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQ-DLG 56 (104)
Q Consensus 24 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-~~~ 56 (104)
++..+-.++...|+..+|++.|++....+. +.|
T Consensus 207 ~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG 240 (388)
T 2ff4_A 207 LWTQLITAYYLSDRQSDALGAYRRVKTTLADDLG 240 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhC
Confidence 556666788999999999999999888765 445
No 365
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=31.28 E-value=1e+02 Score=19.60 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=19.9
Q ss_pred HHHHHHHHHhHHHHHHhccHHHHHHHHHHHH
Q psy10736 19 AAERRANSNLGNSHIFLGEYQAASEHYKRTL 49 (104)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 49 (104)
.....-+..|+..+...+++.+|--++....
T Consensus 8 dl~~~wl~~La~~h~~~~n~~EAa~cl~~~a 38 (428)
T 2wm9_A 8 ELRKTWLDSMARIHVKNGDLSEAAMCYVHVT 38 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3444556677777777777777766665433
No 366
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=30.99 E-value=1.3e+02 Score=20.63 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHh
Q psy10736 61 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 95 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 95 (104)
.+.+++..|......+++.+++.+++.|....+..
T Consensus 259 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 293 (704)
T 2xs1_A 259 QANAEYHQSILAKQQYYFGEEIARLQHAAELIKTV 293 (704)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHH
Confidence 34567777888888899999999999998877644
No 367
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=30.84 E-value=1.2e+02 Score=20.49 Aligned_cols=46 Identities=7% Similarity=-0.100 Sum_probs=34.9
Q ss_pred hhHHHHHHHHhCCH-HHHHHHHHHhHHHHHHhccHHHHHHHHHHHHH
Q psy10736 5 PNDRLKIAREFGDK-AAERRANSNLGNSHIFLGEYQAASEHYKRTLV 50 (104)
Q Consensus 5 ~~~a~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 50 (104)
+..+..++...... .......+.+|.+....|+.++|..+|.++..
T Consensus 301 ~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 301 RRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 34566666666543 34567789999999999999999999988654
No 368
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=29.84 E-value=1e+02 Score=19.16 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=19.7
Q ss_pred HHHHHHhHHHHHHhccHHHHHHHHHHHHHHHH
Q psy10736 22 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ 53 (104)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 53 (104)
+.+++..|......+++.+++..++.+.+.++
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~ 284 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKLYA 284 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 44455555555556667777777776666554
No 369
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=29.36 E-value=55 Score=15.85 Aligned_cols=29 Identities=14% Similarity=-0.134 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLRDYPTAIDYHLRH 88 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 88 (104)
..+..+..=|.-|...||+-.|..++.=+
T Consensus 37 ~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 37 ERALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34566667777788888888877765433
No 370
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=28.12 E-value=1e+02 Score=19.82 Aligned_cols=30 Identities=20% Similarity=0.208 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHh------CChhHHHHHHHHHHH
Q psy10736 61 EAQACYSLGNTYTLL------RDYPTAIDYHLRHLI 90 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~------g~~~~A~~~~~~a~~ 90 (104)
...++..++.+|... +++++|...+++++.
T Consensus 196 k~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 196 KAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 456777788888764 899999999998874
No 371
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=28.02 E-value=74 Score=16.93 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=21.2
Q ss_pred hHHHHHHhccHHHHHHHHHHHHHHHHHh
Q psy10736 28 LGNSHIFLGEYQAASEHYKRTLVLAQDL 55 (104)
Q Consensus 28 l~~~~~~~~~~~~A~~~~~~al~~~~~~ 55 (104)
.+......|++++.-..+.+++++....
T Consensus 39 ~A~~aie~~d~~~k~~~i~KA~~Ii~eL 66 (145)
T 1vh6_A 39 LAAQAIENDDMERKNENLIKAQNIIQEL 66 (145)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3444556789999999999999887543
No 372
>3jq0_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE GOL SO4; 1.13A {Bacteroides vulgatus atcc 8482}
Probab=26.99 E-value=96 Score=19.97 Aligned_cols=31 Identities=19% Similarity=0.102 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHhC--------ChhHHHHHHHHHHH
Q psy10736 60 VEAQACYSLGNTYTLLR--------DYPTAIDYHLRHLI 90 (104)
Q Consensus 60 ~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~a~~ 90 (104)
....++..++.+|...+ ++++|+..+++++.
T Consensus 181 tk~aA~allArvyL~~~~~~~~~~~~~~~A~~~a~~vi~ 219 (493)
T 3jq0_A 181 SAAATQMLKGEAYLWSGRQMNGGNSDYTIAKNAFENVKK 219 (493)
T ss_dssp CHHHHHHHHHHHHHHHHHHSSCTHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHh
Confidence 44567777888888765 57777777777653
No 373
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=26.96 E-value=70 Score=16.28 Aligned_cols=45 Identities=18% Similarity=0.015 Sum_probs=24.2
Q ss_pred HHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHH
Q psy10736 30 NSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYH 85 (104)
Q Consensus 30 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 85 (104)
.....+|+|++|....+. ...|+.. ..++.+-+..|--.++...+
T Consensus 48 sSLmNrG~Yq~Al~l~~~-------~c~pdle----pw~ALce~rlGl~s~le~rL 92 (116)
T 2p58_C 48 SSLMNRGDYASALQQGNK-------LAYPDLE----PWLALCEYRLGLGSALESRL 92 (116)
T ss_dssp HHHHHTTCHHHHHHHHTT-------SCCGGGH----HHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHcchhHHHHHHhcCC-------CCCchHH----HHHHHHHHhcccHHHHHHHH
Confidence 567778888887765433 2233322 23344555556555554444
No 374
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A
Probab=26.85 E-value=1.2e+02 Score=19.08 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCC
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD 57 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 57 (104)
......-++++|..+...|++++|.-++=.+..+++...-
T Consensus 94 A~~~~~ky~~~A~~~~~~g~~~~A~~~LG~a~Hy~~D~~~ 133 (370)
T 2wxu_A 94 GESQIRKFSALARYEWQRGNYKQATFYLGEAMHYFGDIDT 133 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCCC
Confidence 4556677899999999999999999999999998876543
No 375
>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=26.76 E-value=49 Score=17.11 Aligned_cols=15 Identities=20% Similarity=0.135 Sum_probs=12.0
Q ss_pred CChhHHHHHHHHHHH
Q psy10736 76 RDYPTAIDYHLRHLI 90 (104)
Q Consensus 76 g~~~~A~~~~~~a~~ 90 (104)
|+.++|+++|++++-
T Consensus 13 ~d~~~A~~FY~~vfG 27 (149)
T 1u6l_A 13 GNCREAFSCYHQHLG 27 (149)
T ss_dssp SCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhC
Confidence 588888888888763
No 376
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=26.42 E-value=1.2e+02 Score=19.60 Aligned_cols=30 Identities=20% Similarity=0.126 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHH------HhCChhHHHHHHHHHHH
Q psy10736 61 EAQACYSLGNTYT------LLRDYPTAIDYHLRHLI 90 (104)
Q Consensus 61 ~~~~~~~l~~~~~------~~g~~~~A~~~~~~a~~ 90 (104)
...++..++.+|. ..+++++|+..+++++.
T Consensus 187 k~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 187 QAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 3446666777766 56899999999999884
No 377
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3
Probab=25.61 E-value=1.3e+02 Score=18.97 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhHHHHHHhccHHHHHHHHHHHHHHHHHhCChH
Q psy10736 18 KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRA 59 (104)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 59 (104)
......-++++|..+...|++++|.-++=.++.++....-|.
T Consensus 94 A~~~~~ky~~~A~~~~~~g~~~~A~~~LG~a~Hy~~D~~~P~ 135 (370)
T 1olp_A 94 AESQTRKFATLAKNEWDKGNYEKAAWYLGQGMHYFGDLNTPY 135 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCCCCc
Confidence 455667788999999999999999999999999888765543
No 378
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=24.95 E-value=15 Score=23.20 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=0.0
Q ss_pred hccHHHHHHHHHHH
Q psy10736 35 LGEYQAASEHYKRT 48 (104)
Q Consensus 35 ~~~~~~A~~~~~~a 48 (104)
.|++++|+.+|.++
T Consensus 24 ~g~~~eA~~~Y~~a 37 (444)
T 2zan_A 24 AGNYEEALQLYQHA 37 (444)
T ss_dssp --------------
T ss_pred cCCHHHHHHHHHHH
Confidence 34444444444443
No 379
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=22.78 E-value=1.6e+02 Score=18.95 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=27.1
Q ss_pred hHHHHHHhccHHHHHHHHHHHHHHHHHhCChHH
Q psy10736 28 LGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAV 60 (104)
Q Consensus 28 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 60 (104)
-|......|+++.|...+..+...+.+.|+...
T Consensus 388 ~a~~~~~~gd~~~A~~~L~~A~~~~~~~g~~~~ 420 (464)
T 4fx5_A 388 EGLDAQAAGDLDTATARLGRAMDLAVESGHEDT 420 (464)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 345567779999999999999999999888653
No 380
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=22.09 E-value=1.5e+02 Score=18.60 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Q psy10736 61 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 92 (104)
Q Consensus 61 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 92 (104)
.+-+...+..++...|+.+.+.++.++.+++.
T Consensus 122 ~aG~l~~l~~ly~~~g~~~~a~~~~~~l~~~~ 153 (411)
T 3e6u_A 122 DAGPLAVAAVLYHKMNNEKQAEDCITRLIHLN 153 (411)
T ss_dssp THHHHHHHHHHHHHTTCHHHHHHHHHHHHGGG
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 34566667778888899888888877776554
No 381
>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7
Probab=20.93 E-value=50 Score=17.06 Aligned_cols=14 Identities=7% Similarity=0.021 Sum_probs=11.3
Q ss_pred CChhHHHHHHHHHH
Q psy10736 76 RDYPTAIDYHLRHL 89 (104)
Q Consensus 76 g~~~~A~~~~~~a~ 89 (104)
|+.++|+++|++++
T Consensus 14 ~d~~eA~~FY~~~f 27 (139)
T 1tsj_A 14 NQAEEAVKLYTSLF 27 (139)
T ss_dssp SCHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHc
Confidence 67888888888776
No 382
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=20.24 E-value=1.6e+02 Score=17.94 Aligned_cols=85 Identities=15% Similarity=0.046 Sum_probs=59.9
Q ss_pred HHHHHhCCHHHHHHHHHHhHHHHHH----------hccHHHHHHHHHHHHHHHHHhCChHHHHHHHH---HHHHHHHHhC
Q psy10736 10 KIAREFGDKAAERRANSNLGNSHIF----------LGEYQAASEHYKRTLVLAQDLGDRAVEAQACY---SLGNTYTLLR 76 (104)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~---~l~~~~~~~g 76 (104)
..+.++-..+...++...-+..+.. ..+.+..++++++++.++...-++......+. +.-..|+..|
T Consensus 173 ~~askLLKK~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqkaLkiA~~~~d~~~~v~LfveILn~ylyff~~g 252 (298)
T 2r17_C 173 LAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKE 252 (298)
T ss_dssp HHHHTCSSHHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHhccCcHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHhhhhCC
Confidence 3445556677888887777777764 25788999999999999999877655444333 4445566777
Q ss_pred ChhHHHHHHHHHHHHHHH
Q psy10736 77 DYPTAIDYHLRHLIIAQQ 94 (104)
Q Consensus 77 ~~~~A~~~~~~a~~~~~~ 94 (104)
...=..++....+++.+.
T Consensus 253 ~~~Vt~~~in~LI~lI~~ 270 (298)
T 2r17_C 253 NDAVTIQVLNQLIQKIRE 270 (298)
T ss_dssp CTTSCHHHHHHHHHHHHT
T ss_pred CCcccHHHHHHHHHHHHH
Confidence 766667777777777664
No 383
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=20.07 E-value=90 Score=15.87 Aligned_cols=45 Identities=18% Similarity=-0.150 Sum_probs=24.1
Q ss_pred HHHHHhccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCChhHHHHHH
Q psy10736 30 NSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYH 85 (104)
Q Consensus 30 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 85 (104)
.+...+|+|++|....+. ...|+.. ..++.+-+..|--.++...+
T Consensus 47 sSLmNrG~Yq~Al~l~~~-------~c~pdle----pw~ALce~rlGl~s~le~rL 91 (115)
T 2uwj_G 47 SSLANQGRYQEALAFAHG-------NPWPALE----PWFALCEWHLGLGAALDRRL 91 (115)
T ss_dssp HHHHHTTCHHHHHGGGTT-------CCCGGGH----HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHcchhHHHHHHhcCC-------CCCchHH----HHHHHHHHhcccHHHHHHHH
Confidence 566777888877654432 2233322 23445556666555555544
Done!