Query psy10738
Match_columns 609
No_of_seqs 1704 out of 2401
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 17:17:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10738.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10738hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sf4_A G-protein-signaling mod 100.0 6.7E-37 2.3E-41 320.2 49.6 401 19-424 6-406 (406)
2 3ro2_A PINS homolog, G-protein 100.0 4.4E-32 1.5E-36 274.9 47.8 336 19-354 2-337 (338)
3 4a1s_A PINS, partner of inscut 100.0 1.5E-31 5.2E-36 280.8 44.4 338 19-359 45-382 (411)
4 3sf4_A G-protein-signaling mod 100.0 6.2E-29 2.1E-33 259.6 40.7 319 2-340 11-367 (406)
5 4a1s_A PINS, partner of inscut 100.0 2.1E-27 7.3E-32 249.1 40.2 302 58-381 46-364 (411)
6 3ro2_A PINS homolog, G-protein 100.0 5.4E-27 1.9E-31 237.3 39.9 300 60-381 5-324 (338)
7 1w3b_A UDP-N-acetylglucosamine 100.0 2.5E-28 8.6E-33 254.5 24.3 312 3-380 36-359 (388)
8 1w3b_A UDP-N-acetylglucosamine 100.0 5.3E-28 1.8E-32 252.0 23.3 312 3-380 2-325 (388)
9 3ulq_A Response regulator aspa 100.0 5.9E-26 2E-30 236.4 38.7 270 61-355 104-374 (383)
10 3ulq_A Response regulator aspa 100.0 4.1E-25 1.4E-29 229.9 37.9 331 23-381 13-360 (383)
11 3ieg_A DNAJ homolog subfamily 99.9 9.8E-26 3.4E-30 230.7 28.3 317 2-374 5-354 (359)
12 3q15_A PSP28, response regulat 99.9 1.4E-24 4.9E-29 225.5 36.0 270 59-354 100-370 (378)
13 3hym_B Cell division cycle pro 99.9 7.9E-26 2.7E-30 228.9 22.9 292 25-376 25-321 (330)
14 3fp2_A TPR repeat-containing p 99.9 3.6E-25 1.2E-29 240.3 28.4 324 2-381 27-483 (537)
15 2y4t_A DNAJ homolog subfamily 99.9 2.6E-25 9.1E-30 235.9 26.2 318 2-375 28-378 (450)
16 1hz4_A MALT regulatory protein 99.9 4.4E-23 1.5E-27 213.5 41.1 325 23-370 15-343 (373)
17 3ieg_A DNAJ homolog subfamily 99.9 2.2E-24 7.4E-29 220.7 29.9 308 24-381 5-327 (359)
18 1fch_A Peroxisomal targeting s 99.9 4.6E-25 1.6E-29 227.4 24.4 282 25-353 67-363 (368)
19 2xpi_A Anaphase-promoting comp 99.9 1.7E-24 5.9E-29 238.4 29.6 323 3-381 153-571 (597)
20 1fch_A Peroxisomal targeting s 99.9 7.2E-26 2.5E-30 233.5 16.1 302 30-380 33-350 (368)
21 4eqf_A PEX5-related protein; a 99.9 6.2E-25 2.1E-29 226.6 23.1 280 25-350 68-357 (365)
22 3q15_A PSP28, response regulat 99.9 2E-23 7E-28 216.8 34.7 329 24-381 14-357 (378)
23 2y4t_A DNAJ homolog subfamily 99.9 2.5E-24 8.4E-29 228.5 28.1 310 22-381 26-350 (450)
24 2xpi_A Anaphase-promoting comp 99.9 1.5E-24 5.1E-29 238.9 25.0 307 5-371 277-595 (597)
25 2gw1_A Mitochondrial precursor 99.9 5.4E-25 1.8E-29 237.3 19.7 325 2-381 8-470 (514)
26 2gw1_A Mitochondrial precursor 99.9 2E-24 6.9E-29 232.8 21.6 304 22-381 6-436 (514)
27 3fp2_A TPR repeat-containing p 99.9 1.6E-23 5.5E-28 227.3 27.1 265 38-353 218-495 (537)
28 3cv0_A Peroxisome targeting si 99.9 6.9E-24 2.4E-28 214.3 22.5 282 24-353 23-319 (327)
29 3hym_B Cell division cycle pro 99.9 5.5E-24 1.9E-28 215.3 21.1 281 3-337 25-322 (330)
30 4eqf_A PEX5-related protein; a 99.9 5.2E-24 1.8E-28 219.7 19.0 287 43-377 48-344 (365)
31 3nf1_A KLC 1, kinesin light ch 99.9 1E-21 3.4E-26 196.9 32.2 269 57-351 24-309 (311)
32 4g1t_A Interferon-induced prot 99.9 1.1E-23 3.7E-28 225.2 17.7 332 27-385 56-455 (472)
33 1hz4_A MALT regulatory protein 99.9 1E-21 3.6E-26 203.2 31.5 303 55-381 9-314 (373)
34 3uq3_A Heat shock protein STI1 99.9 1.4E-21 4.7E-26 190.2 29.4 249 23-328 6-255 (258)
35 3uq3_A Heat shock protein STI1 99.9 5.2E-22 1.8E-26 193.2 26.3 252 59-369 4-256 (258)
36 4g1t_A Interferon-induced prot 99.9 1E-22 3.5E-27 217.6 20.3 301 2-353 96-463 (472)
37 3nf1_A KLC 1, kinesin light ch 99.9 5.1E-21 1.7E-25 191.7 30.4 279 7-311 12-309 (311)
38 3u4t_A TPR repeat-containing p 99.9 3.2E-22 1.1E-26 196.9 18.6 243 25-312 6-253 (272)
39 3u4t_A TPR repeat-containing p 99.9 2.5E-22 8.7E-27 197.7 16.8 258 62-372 5-267 (272)
40 1qqe_A Vesicular transport pro 99.9 8.7E-21 3E-25 189.6 26.8 228 63-311 40-271 (292)
41 3cv0_A Peroxisome targeting si 99.9 5.9E-22 2E-26 200.1 17.5 276 54-379 15-305 (327)
42 2ifu_A Gamma-SNAP; membrane fu 99.9 3.1E-20 1E-24 187.1 30.0 217 34-272 3-226 (307)
43 1qqe_A Vesicular transport pro 99.9 7.7E-21 2.6E-25 190.0 25.3 275 40-370 3-284 (292)
44 2ifu_A Gamma-SNAP; membrane fu 99.9 2.4E-20 8.3E-25 187.8 29.1 246 72-341 3-253 (307)
45 3edt_B KLC 2, kinesin light ch 99.9 2.6E-20 8.9E-25 183.5 25.1 259 70-349 11-281 (283)
46 2h6f_A Protein farnesyltransfe 99.9 2.9E-21 1E-25 199.7 16.4 248 24-332 99-365 (382)
47 2h6f_A Protein farnesyltransfe 99.9 5E-21 1.7E-25 197.9 16.4 252 59-373 96-366 (382)
48 2pl2_A Hypothetical conserved 99.9 1.1E-20 3.7E-25 180.1 17.0 195 24-267 7-212 (217)
49 2pl2_A Hypothetical conserved 99.9 8.4E-21 2.9E-25 180.9 16.2 196 61-307 6-212 (217)
50 3edt_B KLC 2, kinesin light ch 99.8 3.4E-19 1.1E-23 175.5 27.3 256 33-309 12-281 (283)
51 2xm6_A Protein corresponding t 99.8 6.1E-19 2.1E-23 189.7 28.9 302 3-382 42-425 (490)
52 1xnf_A Lipoprotein NLPI; TPR, 99.8 8.2E-20 2.8E-24 179.6 17.8 255 32-343 15-269 (275)
53 2xm6_A Protein corresponding t 99.8 2.3E-18 7.8E-23 185.2 29.9 274 25-372 42-375 (490)
54 1ouv_A Conserved hypothetical 99.8 1.8E-18 6.3E-23 170.5 24.4 223 60-350 6-252 (273)
55 1ouv_A Conserved hypothetical 99.8 6E-18 2E-22 166.8 26.3 223 24-312 8-254 (273)
56 3gw4_A Uncharacterized protein 99.8 2.5E-17 8.5E-22 154.1 26.3 195 32-250 2-197 (203)
57 3gw4_A Uncharacterized protein 99.8 2.4E-17 8.1E-22 154.3 25.8 194 111-330 3-197 (203)
58 2q7f_A YRRB protein; TPR, prot 99.8 5.2E-19 1.8E-23 170.5 14.8 201 24-272 25-225 (243)
59 2q7f_A YRRB protein; TPR, prot 99.8 3E-19 1E-23 172.1 12.7 221 57-333 20-240 (243)
60 3mkr_A Coatomer subunit epsilo 99.8 5.1E-18 1.7E-22 169.3 19.6 256 28-350 5-265 (291)
61 4abn_A Tetratricopeptide repea 99.8 1E-18 3.6E-23 186.8 15.1 216 38-305 84-317 (474)
62 3vtx_A MAMA; tetratricopeptide 99.8 4.8E-18 1.6E-22 156.8 17.5 169 60-272 5-173 (184)
63 2ho1_A Type 4 fimbrial biogene 99.8 5.3E-18 1.8E-22 164.6 17.7 210 55-312 32-241 (252)
64 3vtx_A MAMA; tetratricopeptide 99.8 1.7E-17 5.9E-22 153.0 20.0 167 24-232 7-173 (184)
65 4b4t_Q 26S proteasome regulato 99.8 1.9E-16 6.5E-21 166.8 29.1 232 25-276 7-252 (434)
66 2vq2_A PILW, putative fimbrial 99.8 3.5E-17 1.2E-21 155.3 20.9 205 60-312 8-214 (225)
67 3u3w_A Transcriptional activat 99.8 1.4E-16 4.7E-21 159.0 25.9 195 23-237 76-274 (293)
68 2qfc_A PLCR protein; TPR, HTH, 99.8 6.6E-17 2.3E-21 161.4 23.1 201 97-317 72-274 (293)
69 2ho1_A Type 4 fimbrial biogene 99.8 3.3E-17 1.1E-21 159.0 20.2 205 22-272 37-241 (252)
70 2qfc_A PLCR protein; TPR, HTH, 99.8 5.5E-17 1.9E-21 161.9 22.0 201 139-359 74-276 (293)
71 4gyw_A UDP-N-acetylglucosamine 99.8 6.7E-18 2.3E-22 187.9 16.8 171 59-273 8-178 (723)
72 4abn_A Tetratricopeptide repea 99.8 3.5E-18 1.2E-22 182.7 14.0 219 79-345 80-317 (474)
73 3ro3_A PINS homolog, G-protein 99.8 2.9E-16 1E-20 140.3 24.0 161 194-354 3-163 (164)
74 1xnf_A Lipoprotein NLPI; TPR, 99.8 2.1E-17 7.1E-22 162.4 17.8 233 68-350 13-245 (275)
75 4gyw_A UDP-N-acetylglucosamine 99.8 6.9E-18 2.4E-22 187.8 16.0 175 95-313 4-178 (723)
76 2vq2_A PILW, putative fimbrial 99.7 1.6E-16 5.5E-21 150.7 23.3 204 23-272 9-214 (225)
77 3u3w_A Transcriptional activat 99.7 1.1E-16 3.8E-21 159.7 23.0 196 62-277 77-274 (293)
78 3ro3_A PINS homolog, G-protein 99.7 7.6E-16 2.6E-20 137.6 23.9 162 133-314 2-163 (164)
79 3mkr_A Coatomer subunit epsilo 99.7 8.5E-17 2.9E-21 160.4 18.9 230 26-313 38-268 (291)
80 3e4b_A ALGK; tetratricopeptide 99.7 7.2E-17 2.4E-21 171.4 18.6 294 5-371 8-365 (452)
81 4b4t_Q 26S proteasome regulato 99.7 8E-16 2.7E-20 162.0 26.5 241 103-363 7-259 (434)
82 4i17_A Hypothetical protein; T 99.7 1.6E-16 5.5E-21 152.0 17.0 204 23-275 8-215 (228)
83 4i17_A Hypothetical protein; T 99.7 2.6E-16 8.8E-21 150.6 16.0 215 61-330 8-224 (228)
84 3e4b_A ALGK; tetratricopeptide 99.7 1.4E-16 4.8E-21 169.2 12.2 274 28-372 9-330 (452)
85 4g5s_E PINS homolog, G-protein 99.7 1.2E-17 4.2E-22 89.6 1.6 24 536-559 1-24 (26)
86 3qky_A Outer membrane assembly 99.7 3.2E-15 1.1E-19 146.2 19.2 209 22-260 15-252 (261)
87 2ond_A Cleavage stimulation fa 99.7 1.3E-15 4.6E-20 153.0 16.5 225 39-313 33-274 (308)
88 3qky_A Outer membrane assembly 99.7 2.6E-15 8.8E-20 146.9 17.7 208 60-299 15-251 (261)
89 3urz_A Uncharacterized protein 99.6 2.6E-15 8.9E-20 141.7 15.3 168 23-231 5-188 (208)
90 3as5_A MAMA; tetratricopeptide 99.6 4E-15 1.4E-19 136.1 14.9 172 58-273 6-177 (186)
91 3as5_A MAMA; tetratricopeptide 99.6 1.8E-14 6E-19 131.8 18.3 168 24-233 10-177 (186)
92 2ond_A Cleavage stimulation fa 99.6 1.5E-14 5.1E-19 145.3 18.6 225 77-353 33-274 (308)
93 1xi4_A Clathrin heavy chain; a 99.6 1.4E-13 4.7E-18 156.4 26.9 296 5-380 1054-1375(1630)
94 2pzi_A Probable serine/threoni 99.6 1.6E-15 5.5E-20 169.3 11.0 192 33-273 402-602 (681)
95 2pzi_A Probable serine/threoni 99.6 6.9E-15 2.4E-19 164.2 15.5 198 71-313 402-602 (681)
96 3urz_A Uncharacterized protein 99.6 1.9E-14 6.6E-19 135.7 15.8 166 61-271 5-188 (208)
97 1xi4_A Clathrin heavy chain; a 99.6 8.4E-13 2.9E-17 150.0 27.7 236 29-350 1056-1310(1630)
98 4ga2_A E3 SUMO-protein ligase 99.5 3.6E-15 1.2E-19 132.9 5.9 147 65-255 2-149 (150)
99 4ga2_A E3 SUMO-protein ligase 99.5 6.5E-15 2.2E-19 131.2 7.3 145 29-215 4-149 (150)
100 4g5s_E PINS homolog, G-protein 99.5 1.4E-15 4.9E-20 81.6 1.6 25 502-526 1-25 (26)
101 2ooe_A Cleavage stimulation fa 99.5 1.7E-13 5.9E-18 148.5 19.6 173 178-379 256-444 (530)
102 2yhc_A BAMD, UPF0169 lipoprote 99.5 1.9E-13 6.5E-18 130.5 17.1 89 61-155 5-93 (225)
103 2yhc_A BAMD, UPF0169 lipoprote 99.5 9.6E-13 3.3E-17 125.6 21.2 194 23-272 5-216 (225)
104 3rjv_A Putative SEL1 repeat pr 99.5 6.7E-13 2.3E-17 125.4 15.6 177 39-269 3-197 (212)
105 2vsy_A XCC0866; transferase, g 99.4 4E-13 1.4E-17 146.9 14.0 159 35-235 2-163 (568)
106 3dra_A Protein farnesyltransfe 99.4 2.1E-12 7.2E-17 128.2 17.4 229 29-308 39-286 (306)
107 4gco_A Protein STI-1; structur 99.4 1.5E-12 5.2E-17 112.0 13.9 110 24-149 15-124 (126)
108 2ooe_A Cleavage stimulation fa 99.4 2.7E-12 9.1E-17 139.1 17.7 225 39-312 255-495 (530)
109 4g5o_E G-protein-signaling mod 99.4 4.6E-14 1.6E-18 75.0 1.7 24 567-590 1-24 (26)
110 2r5s_A Uncharacterized protein 99.4 4.5E-13 1.5E-17 122.5 9.6 58 28-89 12-69 (176)
111 3rjv_A Putative SEL1 repeat pr 99.4 9.6E-13 3.3E-17 124.4 12.1 177 77-309 3-197 (212)
112 3qou_A Protein YBBN; thioredox 99.4 2E-12 7E-17 128.3 14.7 167 61-269 118-284 (287)
113 1p5q_A FKBP52, FK506-binding p 99.4 2E-14 6.9E-19 146.2 0.1 192 36-271 79-296 (336)
114 1b89_A Protein (clathrin heavy 99.4 1.5E-13 5.1E-18 141.0 6.0 95 245-346 212-308 (449)
115 3qou_A Protein YBBN; thioredox 99.4 3.1E-12 1.1E-16 127.0 15.3 165 25-229 120-284 (287)
116 4gco_A Protein STI-1; structur 99.4 3.1E-12 1.1E-16 110.0 12.9 113 59-209 12-124 (126)
117 1b89_A Protein (clathrin heavy 99.4 1.4E-13 4.8E-18 141.2 4.5 240 32-371 13-252 (449)
118 2r5s_A Uncharacterized protein 99.4 5.9E-13 2E-17 121.7 7.8 62 242-307 110-171 (176)
119 4gcn_A Protein STI-1; structur 99.4 7.3E-12 2.5E-16 107.8 13.7 108 197-310 5-113 (127)
120 2vsy_A XCC0866; transferase, g 99.4 2.5E-12 8.5E-17 140.6 12.4 157 73-273 2-161 (568)
121 3gyz_A Chaperone protein IPGC; 99.3 7.8E-13 2.7E-17 117.5 6.4 112 43-190 23-134 (151)
122 3upv_A Heat shock protein STI1 99.3 3.7E-11 1.3E-15 102.8 16.9 120 23-152 5-124 (126)
123 3dra_A Protein farnesyltransfe 99.3 1.5E-11 5.1E-16 122.1 16.2 225 71-348 43-286 (306)
124 1p5q_A FKBP52, FK506-binding p 99.3 1.1E-12 3.7E-17 133.4 8.0 161 35-231 126-296 (336)
125 4gcn_A Protein STI-1; structur 99.3 3.3E-11 1.1E-15 103.6 15.8 105 59-189 7-112 (127)
126 1a17_A Serine/threonine protei 99.3 9.6E-11 3.3E-15 104.9 17.9 140 21-194 12-151 (166)
127 1hh8_A P67PHOX, NCF-2, neutrop 99.3 2.8E-11 9.4E-16 113.8 14.8 136 22-190 6-151 (213)
128 3gyz_A Chaperone protein IPGC; 99.3 2.1E-12 7.2E-17 114.7 6.6 104 96-231 32-135 (151)
129 2fo7_A Synthetic consensus TPR 99.3 3.3E-11 1.1E-15 103.3 13.7 130 62-229 3-132 (136)
130 3dss_A Geranylgeranyl transfer 99.3 2.2E-10 7.7E-15 114.3 21.5 232 29-313 36-308 (331)
131 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.3E-11 4.6E-16 115.9 12.2 137 200-351 6-152 (213)
132 3upv_A Heat shock protein STI1 99.3 3.5E-11 1.2E-15 103.0 13.8 119 200-330 4-122 (126)
133 4f3v_A ESX-1 secretion system 99.3 6.6E-12 2.3E-16 121.9 9.9 208 25-271 10-239 (282)
134 1a17_A Serine/threonine protei 99.3 7.8E-11 2.7E-15 105.5 15.9 138 59-232 12-149 (166)
135 3n71_A Histone lysine methyltr 99.3 1.7E-10 5.9E-15 122.2 20.8 149 64-232 313-467 (490)
136 4f3v_A ESX-1 secretion system 99.3 2.2E-11 7.6E-16 118.2 12.5 208 62-310 9-238 (282)
137 3n71_A Histone lysine methyltr 99.3 2.1E-10 7.3E-15 121.5 20.9 147 104-270 313-465 (490)
138 2fo7_A Synthetic consensus TPR 99.3 1.4E-10 4.7E-15 99.3 16.1 128 26-189 5-132 (136)
139 2vgx_A Chaperone SYCD; alterna 99.2 2.2E-11 7.6E-16 107.8 10.0 114 42-191 7-120 (148)
140 2hr2_A Hypothetical protein; a 99.2 2.6E-10 8.9E-15 100.3 16.3 114 21-134 10-136 (159)
141 2hr2_A Hypothetical protein; a 99.2 1.4E-10 4.9E-15 102.0 14.1 117 199-315 10-137 (159)
142 2fbn_A 70 kDa peptidylprolyl i 99.2 8.7E-12 3E-16 116.2 6.8 160 63-260 7-176 (198)
143 2fbn_A 70 kDa peptidylprolyl i 99.2 9.9E-12 3.4E-16 115.8 6.2 161 102-300 6-176 (198)
144 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 1.7E-11 5.6E-16 130.1 8.3 152 72-261 246-406 (457)
145 2c2l_A CHIP, carboxy terminus 99.2 6.3E-11 2.2E-15 117.1 11.8 193 24-269 6-199 (281)
146 2vgx_A Chaperone SYCD; alterna 99.2 2.4E-11 8.1E-16 107.6 7.8 114 82-233 9-122 (148)
147 2lni_A Stress-induced-phosphop 99.2 2.6E-10 8.9E-15 97.7 13.9 119 21-155 15-133 (133)
148 3sz7_A HSC70 cochaperone (SGT) 99.2 2.8E-10 9.5E-15 102.3 14.1 104 22-135 11-114 (164)
149 3sz7_A HSC70 cochaperone (SGT) 99.2 2.4E-10 8.1E-15 102.8 13.4 108 96-235 7-114 (164)
150 2e2e_A Formate-dependent nitri 99.2 1E-10 3.5E-15 106.6 10.6 126 31-192 19-147 (177)
151 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 2.1E-11 7.1E-16 129.4 6.4 152 35-222 247-407 (457)
152 2xcb_A PCRH, regulatory protei 99.2 7.2E-11 2.5E-15 103.6 8.9 82 62-155 20-101 (142)
153 2vyi_A SGTA protein; chaperone 99.1 1E-09 3.6E-14 93.3 15.6 119 21-155 11-129 (131)
154 2xcb_A PCRH, regulatory protei 99.1 7.2E-10 2.5E-14 97.1 14.7 101 23-133 19-119 (142)
155 2om2_B Regulator of G-protein 99.1 1.4E-11 4.8E-16 75.0 2.3 26 443-468 2-27 (36)
156 2c2l_A CHIP, carboxy terminus 99.1 2.2E-11 7.6E-16 120.3 5.2 194 100-348 4-198 (281)
157 3rkv_A Putative peptidylprolyl 99.1 4E-10 1.4E-14 101.1 12.9 105 59-189 10-126 (162)
158 3rkv_A Putative peptidylprolyl 99.1 1E-09 3.6E-14 98.3 15.7 123 22-155 11-147 (162)
159 2vyi_A SGTA protein; chaperone 99.1 7.2E-10 2.5E-14 94.3 13.3 118 60-215 12-129 (131)
160 1hxi_A PEX5, peroxisome target 99.1 4.6E-10 1.6E-14 95.5 11.5 98 25-132 20-117 (121)
161 3q49_B STIP1 homology and U bo 99.1 1.6E-09 5.5E-14 93.6 15.3 100 23-132 10-109 (137)
162 2lni_A Stress-induced-phosphop 99.1 4.6E-10 1.6E-14 96.2 11.3 117 60-214 16-132 (133)
163 3q7a_A Farnesyltransferase alp 99.1 3.2E-10 1.1E-14 113.6 11.7 236 32-307 64-329 (349)
164 1na0_A Designed protein CTPR3; 99.1 2.2E-09 7.5E-14 90.4 15.1 116 23-154 10-125 (125)
165 2e2e_A Formate-dependent nitri 99.1 3.7E-10 1.3E-14 102.8 10.6 128 70-235 20-150 (177)
166 3dss_A Geranylgeranyl transfer 99.0 4.8E-09 1.6E-13 104.7 17.5 226 71-350 40-305 (331)
167 3q7a_A Farnesyltransferase alp 99.0 6.9E-10 2.3E-14 111.3 10.9 240 59-348 53-330 (349)
168 1elw_A TPR1-domain of HOP; HOP 99.0 3.5E-09 1.2E-13 88.2 13.8 110 24-149 6-115 (118)
169 1na0_A Designed protein CTPR3; 99.0 3.4E-09 1.1E-13 89.3 13.6 116 60-213 9-124 (125)
170 1ihg_A Cyclophilin 40; ppiase 99.0 1.6E-09 5.5E-14 111.3 13.8 130 200-341 223-362 (370)
171 3q49_B STIP1 homology and U bo 99.0 2.1E-09 7.1E-14 92.9 12.3 101 60-192 9-109 (137)
172 1elr_A TPR2A-domain of HOP; HO 99.0 3.7E-09 1.3E-13 89.9 13.4 122 199-333 3-125 (131)
173 1dce_A Protein (RAB geranylger 99.0 1E-09 3.4E-14 119.1 11.9 181 30-258 36-244 (567)
174 2xev_A YBGF; tetratricopeptide 99.0 7.4E-09 2.5E-13 88.3 15.1 103 25-131 5-107 (129)
175 1elr_A TPR2A-domain of HOP; HO 99.0 7.6E-09 2.6E-13 87.9 15.0 104 60-189 4-108 (131)
176 1wao_1 Serine/threonine protei 99.0 5E-11 1.7E-15 127.0 1.0 128 99-264 5-134 (477)
177 1ihg_A Cyclophilin 40; ppiase 99.0 2.7E-09 9.2E-14 109.6 13.4 91 59-155 222-322 (370)
178 1hxi_A PEX5, peroxisome target 99.0 3E-09 1E-13 90.4 10.4 98 62-191 19-116 (121)
179 2dba_A Smooth muscle cell asso 99.0 7.1E-09 2.4E-13 90.5 12.8 103 22-131 28-130 (148)
180 4g5o_E G-protein-signaling mod 98.9 2.8E-10 9.5E-15 60.6 2.1 23 536-558 1-23 (26)
181 1elw_A TPR1-domain of HOP; HOP 98.9 8.2E-09 2.8E-13 85.9 12.2 112 60-209 4-115 (118)
182 2if4_A ATFKBP42; FKBP-like, al 98.9 1E-09 3.4E-14 111.5 6.8 142 99-272 178-331 (338)
183 2if4_A ATFKBP42; FKBP-like, al 98.9 1.8E-09 6.1E-14 109.6 8.4 138 22-191 179-330 (338)
184 3mv2_B Coatomer subunit epsilo 98.9 1.2E-08 4.3E-13 100.2 14.1 258 29-350 20-283 (310)
185 1wao_1 Serine/threonine protei 98.9 1E-09 3.6E-14 116.8 6.6 121 28-184 12-134 (477)
186 3k9i_A BH0479 protein; putativ 98.9 5.3E-09 1.8E-13 88.0 9.6 91 34-131 2-92 (117)
187 3qww_A SET and MYND domain-con 98.9 4.7E-08 1.6E-12 101.8 18.0 117 71-207 309-431 (433)
188 1zu2_A Mitochondrial import re 98.9 3.5E-09 1.2E-13 92.9 7.7 88 34-131 14-122 (158)
189 3qwp_A SET and MYND domain-con 98.9 6.8E-08 2.3E-12 100.8 18.9 130 24-154 289-427 (429)
190 3qww_A SET and MYND domain-con 98.9 5.3E-08 1.8E-12 101.4 17.9 116 111-246 309-430 (433)
191 2xev_A YBGF; tetratricopeptide 98.8 1.8E-08 6E-13 86.0 11.4 102 62-189 4-105 (129)
192 3qwp_A SET and MYND domain-con 98.8 5E-08 1.7E-12 101.8 16.8 129 105-253 292-426 (429)
193 2kat_A Uncharacterized protein 98.8 3.1E-08 1E-12 82.9 12.4 89 39-137 2-90 (115)
194 2dba_A Smooth muscle cell asso 98.8 1.9E-08 6.3E-13 87.8 10.3 101 60-189 28-128 (148)
195 3mv2_B Coatomer subunit epsilo 98.8 7E-08 2.4E-12 94.8 15.1 195 41-272 85-285 (310)
196 2kck_A TPR repeat; tetratricop 98.8 1.6E-08 5.4E-13 83.4 8.8 96 26-131 10-108 (112)
197 1dce_A Protein (RAB geranylger 98.8 1.2E-08 4.1E-13 110.6 10.3 177 72-298 40-244 (567)
198 2kck_A TPR repeat; tetratricop 98.8 9.4E-09 3.2E-13 84.7 6.7 98 62-189 8-106 (112)
199 3k9i_A BH0479 protein; putativ 98.8 9.1E-09 3.1E-13 86.6 6.3 86 113-230 3-91 (117)
200 4e6h_A MRNA 3'-END-processing 98.7 4.9E-07 1.7E-11 99.5 19.6 230 39-312 326-573 (679)
201 2l6j_A TPR repeat-containing p 98.7 6.6E-09 2.2E-13 86.0 3.6 91 60-156 4-94 (111)
202 2l6j_A TPR repeat-containing p 98.7 1.4E-08 4.7E-13 84.0 4.4 97 24-124 6-102 (111)
203 4e6h_A MRNA 3'-END-processing 98.6 1E-06 3.4E-11 97.0 20.0 228 78-351 327-572 (679)
204 1zu2_A Mitochondrial import re 98.6 5.4E-08 1.8E-12 85.4 7.1 98 72-190 14-121 (158)
205 3ma5_A Tetratricopeptide repea 98.6 4.4E-07 1.5E-11 73.8 11.8 72 60-137 7-78 (100)
206 2om2_B Regulator of G-protein 98.6 2.4E-08 8.3E-13 60.9 3.0 23 537-559 3-25 (36)
207 1na3_A Designed protein CTPR2; 98.6 2.6E-07 8.9E-12 73.0 10.2 84 59-154 8-91 (91)
208 1na3_A Designed protein CTPR2; 98.6 7.6E-07 2.6E-11 70.3 11.9 82 23-114 10-91 (91)
209 2kat_A Uncharacterized protein 98.5 7E-07 2.4E-11 74.4 11.4 87 78-196 3-89 (115)
210 1klx_A Cysteine rich protein B 98.5 8.9E-07 3E-11 76.8 12.3 110 36-189 9-126 (138)
211 3txn_A 26S proteasome regulato 98.5 1.3E-05 4.4E-10 81.5 22.5 196 140-356 19-217 (394)
212 3ma5_A Tetratricopeptide repea 98.5 5.8E-07 2E-11 73.1 9.5 71 199-275 6-76 (100)
213 3txn_A 26S proteasome regulato 98.5 3.9E-05 1.3E-09 78.0 24.2 214 61-296 20-236 (394)
214 3ly7_A Transcriptional activat 98.4 6.5E-06 2.2E-10 82.3 17.5 141 18-189 192-339 (372)
215 2kc7_A BFR218_protein; tetratr 98.4 7.6E-07 2.6E-11 71.8 8.3 89 26-132 4-93 (99)
216 1klx_A Cysteine rich protein B 98.4 1.6E-06 5.4E-11 75.2 10.0 110 74-229 9-126 (138)
217 3ly7_A Transcriptional activat 98.2 3.3E-05 1.1E-09 77.3 15.3 150 47-231 185-341 (372)
218 2kc7_A BFR218_protein; tetratr 98.1 4.8E-06 1.6E-10 67.0 7.2 62 64-131 4-66 (99)
219 3u64_A Protein TP_0956; tetrat 98.1 0.00031 1.1E-08 67.3 19.7 92 172-273 175-273 (301)
220 2v5f_A Prolyl 4-hydroxylase su 98.0 5.5E-05 1.9E-09 61.7 11.6 82 280-367 5-87 (104)
221 2v5f_A Prolyl 4-hydroxylase su 98.0 2.8E-05 9.7E-10 63.5 9.2 74 28-107 11-87 (104)
222 2uy1_A Cleavage stimulation fa 98.0 0.0011 3.6E-08 70.5 23.8 188 12-229 6-242 (493)
223 3ffl_A Anaphase-promoting comp 97.8 0.0003 1E-08 61.2 13.3 123 242-371 22-166 (167)
224 2uy1_A Cleavage stimulation fa 97.8 0.002 6.7E-08 68.4 22.7 19 35-53 102-120 (493)
225 3ffl_A Anaphase-promoting comp 97.8 0.00044 1.5E-08 60.2 14.0 125 200-331 20-166 (167)
226 4b4t_P 26S proteasome regulato 97.7 0.0058 2E-07 63.7 24.2 219 74-317 30-255 (445)
227 4b4t_P 26S proteasome regulato 97.7 0.0038 1.3E-07 65.0 21.8 224 114-362 30-260 (445)
228 3bee_A Putative YFRE protein; 97.6 0.00027 9.2E-09 56.2 8.7 65 62-132 8-75 (93)
229 1pc2_A Mitochondria fission pr 97.5 0.00065 2.2E-08 58.7 10.6 87 37-131 13-102 (152)
230 2xns_C RGS14, regulator of G-p 97.5 4.3E-05 1.5E-09 46.4 2.1 23 443-465 2-24 (40)
231 3bee_A Putative YFRE protein; 97.4 0.00058 2E-08 54.2 8.4 61 25-89 9-72 (93)
232 3u64_A Protein TP_0956; tetrat 97.3 0.00095 3.2E-08 64.0 10.1 88 38-133 179-273 (301)
233 2xns_C RGS14, regulator of G-p 97.1 0.00016 5.6E-09 43.9 1.7 19 503-521 3-21 (40)
234 4g26_A Pentatricopeptide repea 97.1 0.013 4.6E-07 62.0 16.9 162 29-229 33-204 (501)
235 1pc2_A Mitochondria fission pr 97.0 0.0012 4.1E-08 57.0 6.4 88 176-273 14-104 (152)
236 4g26_A Pentatricopeptide repea 96.9 0.017 5.7E-07 61.2 15.6 168 62-269 28-204 (501)
237 4b4t_S RPN3, 26S proteasome re 96.5 0.0088 3E-07 62.2 9.9 239 108-378 144-400 (523)
238 4b4t_S RPN3, 26S proteasome re 96.3 0.018 6.3E-07 59.8 10.5 170 67-258 143-329 (523)
239 4b4t_R RPN7, 26S proteasome re 96.2 0.0093 3.2E-07 61.8 8.1 104 242-348 133-236 (429)
240 4b4t_R RPN7, 26S proteasome re 96.1 0.019 6.5E-07 59.5 9.9 127 80-229 110-237 (429)
241 1nzn_A CGI-135 protein, fissio 95.5 0.076 2.6E-06 44.0 9.3 87 37-131 16-105 (126)
242 3mkq_A Coatomer beta'-subunit; 95.4 0.7 2.4E-05 51.6 20.3 26 201-226 682-707 (814)
243 3mkq_A Coatomer beta'-subunit; 95.3 1.3 4.5E-05 49.3 21.8 101 30-187 607-708 (814)
244 4h7y_A Dual specificity protei 94.6 0.55 1.9E-05 40.0 12.1 91 34-131 25-125 (161)
245 2wpv_A GET4, UPF0363 protein Y 94.5 3.8 0.00013 39.8 20.6 147 202-350 55-218 (312)
246 1nzn_A CGI-135 protein, fissio 94.5 0.28 9.5E-06 40.6 9.8 63 25-89 38-103 (126)
247 2ff4_A Probable regulatory pro 94.3 0.82 2.8E-05 46.3 15.2 105 21-131 114-236 (388)
248 4h7y_A Dual specificity protei 94.3 0.48 1.6E-05 40.3 10.8 102 242-350 15-124 (161)
249 1y8m_A FIS1; mitochondria, unk 93.9 0.74 2.5E-05 38.8 11.3 47 40-89 60-106 (144)
250 3mkq_B Coatomer subunit alpha; 93.8 1.2 4.3E-05 39.1 13.3 49 70-129 15-63 (177)
251 3o48_A Mitochondria fission 1 93.8 0.7 2.4E-05 38.4 10.8 31 100-130 78-108 (134)
252 4gns_B Protein CSD3, chitin bi 92.9 0.7 2.4E-05 50.8 12.4 121 35-186 261-397 (754)
253 4ady_A RPN2, 26S proteasome re 92.6 7 0.00024 43.9 19.8 190 31-257 383-577 (963)
254 3mkq_B Coatomer subunit alpha; 91.3 3.1 0.00011 36.6 12.4 92 30-155 13-104 (177)
255 2wpv_A GET4, UPF0363 protein Y 91.2 11 0.00039 36.4 27.4 105 100-224 53-158 (312)
256 4gns_B Protein CSD3, chitin bi 89.6 2.4 8.1E-05 46.6 12.3 84 37-126 300-397 (754)
257 4fhn_B Nucleoporin NUP120; pro 89.2 10 0.00035 44.2 18.2 206 142-379 844-1084(1139)
258 3o48_A Mitochondria fission 1 88.6 5.9 0.0002 32.9 11.1 67 279-350 39-108 (134)
259 3lpz_A GET4 (YOR164C homolog); 87.8 21 0.00073 34.8 22.7 90 260-350 115-217 (336)
260 3kae_A CDC27, possible protein 87.8 13 0.00044 32.2 15.5 122 30-189 10-143 (242)
261 1y8m_A FIS1; mitochondria, unk 87.5 5.6 0.00019 33.5 10.4 67 279-350 38-107 (144)
262 2ff4_A Probable regulatory pro 87.3 12 0.00042 37.5 15.2 73 281-359 172-245 (388)
263 1ya0_A SMG-7 transcript varian 87.2 1.4 4.8E-05 46.0 8.3 81 61-153 153-233 (497)
264 1ya0_A SMG-7 transcript varian 87.1 1.5 5E-05 45.9 8.3 61 241-307 153-213 (497)
265 4b4t_O 26S proteasome regulato 86.9 22 0.00075 35.7 16.8 131 220-353 59-202 (393)
266 4fhn_B Nucleoporin NUP120; pro 86.0 15 0.00051 42.9 17.0 103 101-224 843-962 (1139)
267 3kae_A CDC27, possible protein 85.8 7.6 0.00026 33.6 10.4 97 102-229 35-143 (242)
268 3spa_A Mtrpol, DNA-directed RN 85.4 4.9 0.00017 45.5 11.6 104 198-308 125-229 (1134)
269 3tvt_B PINS, partner of inscut 83.1 0.24 8.2E-06 31.2 0.0 24 403-426 18-41 (50)
270 4b4t_O 26S proteasome regulato 82.8 42 0.0014 33.7 16.8 129 180-311 59-200 (393)
271 4ady_A RPN2, 26S proteasome re 81.5 75 0.0026 35.7 22.7 255 31-335 420-680 (963)
272 3re2_A Predicted protein; meni 80.0 21 0.0007 34.8 12.0 91 279-370 254-346 (472)
273 3spa_A Mtrpol, DNA-directed RN 79.0 17 0.00058 41.2 12.8 102 240-348 127-229 (1134)
274 1qsa_A Protein (soluble lytic 78.4 71 0.0024 34.2 17.4 128 206-348 220-347 (618)
275 1zbp_A Hypothetical protein VP 77.0 22 0.00076 33.4 11.2 56 30-89 5-60 (273)
276 3u84_A Menin; MLL, JUND, ledgf 76.3 28 0.00096 34.6 11.9 90 280-370 277-368 (550)
277 2cwy_A Hypothetical protein TT 75.7 13 0.00046 28.7 8.0 69 286-356 7-75 (94)
278 4gq2_M Nucleoporin NUP120; bet 72.5 16 0.00054 41.6 11.0 92 282-374 842-950 (950)
279 3iqu_A 14-3-3 protein sigma; s 72.5 59 0.002 29.8 20.1 187 24-231 10-207 (236)
280 1qsa_A Protein (soluble lytic 72.3 20 0.00068 38.5 11.1 127 29-188 221-347 (618)
281 2ijq_A Hypothetical protein; s 72.2 23 0.00078 30.5 9.2 73 22-94 32-109 (161)
282 3re2_A Predicted protein; meni 71.9 29 0.00098 33.8 10.6 84 189-273 244-329 (472)
283 4gq4_A Menin; tumor suppressor 70.6 40 0.0014 33.5 11.5 91 279-370 261-353 (489)
284 2crb_A Nuclear receptor bindin 68.9 16 0.00055 27.8 6.5 34 279-312 14-47 (97)
285 3u84_A Menin; MLL, JUND, ledgf 67.2 38 0.0013 33.6 10.5 54 219-273 298-351 (550)
286 2ijq_A Hypothetical protein; s 65.9 15 0.00052 31.6 6.8 73 284-356 36-111 (161)
287 2cwy_A Hypothetical protein TT 65.5 22 0.00075 27.5 7.1 67 27-95 6-74 (94)
288 2crb_A Nuclear receptor bindin 64.3 20 0.00068 27.3 6.2 36 318-353 13-48 (97)
289 1zbp_A Hypothetical protein VP 63.6 97 0.0033 29.0 12.3 56 70-131 7-62 (273)
290 3uzd_A 14-3-3 protein gamma; s 62.2 99 0.0034 28.6 22.0 190 24-232 6-206 (248)
291 2yin_A DOCK2, dedicator of cyt 61.5 1.4E+02 0.0049 30.2 14.7 53 323-375 95-148 (436)
292 4gq2_M Nucleoporin NUP120; bet 61.1 88 0.003 35.5 14.1 115 29-152 817-948 (950)
293 4gq4_A Menin; tumor suppressor 60.4 51 0.0017 32.9 10.0 73 199-272 261-335 (489)
294 2npm_A 14-3-3 domain containin 59.7 1.1E+02 0.0038 28.4 23.3 190 23-231 29-229 (260)
295 3ax2_A Mitochondrial import re 59.0 29 0.00099 25.3 6.2 34 22-55 17-50 (73)
296 3t5v_B Nuclear mRNA export pro 58.2 57 0.0019 33.4 10.7 31 279-309 219-249 (455)
297 3ubw_A 14-3-3E, 14-3-3 protein 57.6 1.2E+02 0.0042 28.2 24.7 190 23-231 32-230 (261)
298 2br9_A 14-3-3E, 14-3-3 protein 55.3 1.3E+02 0.0043 27.6 24.7 190 24-232 7-205 (234)
299 3t5v_B Nuclear mRNA export pro 53.8 61 0.0021 33.1 10.1 170 176-355 142-330 (455)
300 3rau_A Tyrosine-protein phosph 53.6 1.7E+02 0.0059 28.7 14.8 44 138-192 115-158 (363)
301 2w2u_A Hypothetical P60 katani 52.8 21 0.00073 26.8 4.9 27 24-50 21-47 (83)
302 4a5x_A MITD1, MIT domain-conta 52.5 72 0.0025 24.0 8.4 34 18-51 12-45 (86)
303 1o9d_A 14-3-3-like protein C; 51.7 1.5E+02 0.0052 27.5 25.0 188 24-230 10-208 (260)
304 1wfd_A Hypothetical protein 15 51.0 81 0.0028 24.1 8.9 38 14-51 7-44 (93)
305 3esl_A Checkpoint serine/threo 50.4 1.4E+02 0.0047 26.6 14.7 129 176-309 8-144 (202)
306 2v6y_A AAA family ATPase, P60 50.2 25 0.00084 26.4 4.9 27 24-50 13-39 (83)
307 2qx5_A Nucleoporin NIC96; mRNA 48.4 2.2E+02 0.0076 30.5 13.8 25 208-232 464-488 (661)
308 3lpz_A GET4 (YOR164C homolog); 47.8 2E+02 0.007 27.8 30.2 97 107-223 62-159 (336)
309 2qx5_A Nucleoporin NIC96; mRNA 47.5 2.7E+02 0.0092 29.9 14.3 21 106-126 300-320 (661)
310 2yin_A DOCK2, dedicator of cyt 46.9 2.4E+02 0.0083 28.5 16.1 126 185-333 20-146 (436)
311 2wm9_A Dedicator of cytokinesi 46.3 1.7E+02 0.0057 29.6 12.0 33 56-88 7-39 (428)
312 3ubw_A 14-3-3E, 14-3-3 protein 45.5 1.9E+02 0.0065 26.8 20.8 53 217-270 173-229 (261)
313 1om2_A Protein (mitochondrial 44.6 28 0.00094 26.9 4.3 33 22-54 20-52 (95)
314 2rpa_A Katanin P60 ATPase-cont 44.6 31 0.0011 25.5 4.5 30 283-312 15-44 (78)
315 2vkj_A TM1634; membrane protei 44.6 99 0.0034 23.3 7.6 31 23-53 54-84 (106)
316 2wm9_A Dedicator of cytokinesi 44.1 2.3E+02 0.0077 28.6 12.6 31 199-229 10-40 (428)
317 3iqu_A 14-3-3 protein sigma; s 43.6 1.9E+02 0.0066 26.4 17.9 73 197-270 120-206 (236)
318 2r17_C Vacuolar protein sortin 43.0 2.3E+02 0.0077 27.0 26.2 175 80-272 79-270 (298)
319 3uzd_A 14-3-3 protein gamma; s 43.0 2E+02 0.0069 26.4 19.6 72 198-270 119-204 (248)
320 2rpa_A Katanin P60 ATPase-cont 42.5 30 0.001 25.6 4.1 30 203-232 15-44 (78)
321 3r9m_A BRO1 domain-containing 42.2 2.6E+02 0.009 27.5 13.1 18 138-155 112-129 (376)
322 3t5x_A PCI domain-containing p 39.5 80 0.0027 28.2 7.5 60 197-257 11-70 (203)
323 1wy6_A Hypothetical protein ST 39.2 1.4E+02 0.0047 25.0 7.9 56 30-89 99-154 (172)
324 3efz_A 14-3-3 protein; 14-3-3, 38.5 2.4E+02 0.0084 26.2 10.6 68 62-129 144-226 (268)
325 2w2u_A Hypothetical P60 katani 38.4 60 0.002 24.3 5.4 27 105-131 24-50 (83)
326 2v6x_A Vacuolar protein sortin 36.9 51 0.0018 24.7 4.9 29 22-50 13-41 (85)
327 3r9m_A BRO1 domain-containing 36.6 3.2E+02 0.011 26.9 14.3 35 317-351 250-284 (376)
328 4a5x_A MITD1, MIT domain-conta 35.6 78 0.0027 23.8 5.7 31 101-131 17-47 (86)
329 2v6y_A AAA family ATPase, P60 34.8 72 0.0025 23.8 5.4 25 107-131 18-42 (83)
330 2cpt_A SKD1 protein, vacuolar 34.6 51 0.0017 26.6 4.7 27 24-50 20-46 (117)
331 3esl_A Checkpoint serine/threo 34.5 2.5E+02 0.0084 25.0 15.5 84 261-349 58-144 (202)
332 3t5x_A PCI domain-containing p 34.2 1.6E+02 0.0055 26.1 8.6 38 17-54 9-46 (203)
333 3c3r_A Programmed cell death 6 31.9 2.3E+02 0.0079 28.0 10.2 18 138-155 140-157 (380)
334 4aez_C MAD3, mitotic spindle c 30.8 2.7E+02 0.0094 25.1 9.4 81 260-350 97-180 (223)
335 2r17_C Vacuolar protein sortin 30.2 3.6E+02 0.012 25.6 26.3 173 180-352 79-270 (298)
336 2v6x_A Vacuolar protein sortin 29.9 1.1E+02 0.0039 22.7 5.8 27 105-131 18-44 (85)
337 1zb1_A BRO1 protein; AIP1, BRO 29.9 1.2E+02 0.0041 30.2 7.8 40 138-191 121-160 (392)
338 2ynq_A ESSB; membrane protein, 29.9 2.6E+02 0.0088 23.8 11.9 106 21-146 7-112 (161)
339 2br9_A 14-3-3E, 14-3-3 protein 29.7 3.2E+02 0.011 24.8 22.1 55 217-271 147-204 (234)
340 1o9d_A 14-3-3-like protein C; 29.4 3.5E+02 0.012 25.1 22.3 54 217-270 152-208 (260)
341 2xs1_A Programmed cell death 6 29.0 2.7E+02 0.0092 30.2 10.9 34 279-312 259-292 (704)
342 1wfd_A Hypothetical protein 15 27.6 1.3E+02 0.0043 23.0 5.8 27 105-131 20-46 (93)
343 4aez_C MAD3, mitotic spindle c 27.0 3.5E+02 0.012 24.4 11.7 124 176-309 51-179 (223)
344 1zb1_A BRO1 protein; AIP1, BRO 26.5 4.7E+02 0.016 25.7 12.4 20 196-215 119-138 (392)
345 3rau_A Tyrosine-protein phosph 26.3 4.6E+02 0.016 25.6 15.4 34 240-273 252-285 (363)
346 2wb7_A PT26-6P; extra chromoso 25.9 4.9E+02 0.017 26.6 10.9 39 170-208 442-482 (526)
347 2cpt_A SKD1 protein, vacuolar 24.6 2.7E+02 0.0092 22.2 7.8 26 287-312 25-50 (117)
348 2npm_A 14-3-3 domain containin 23.6 4.4E+02 0.015 24.4 21.5 53 217-270 173-228 (260)
349 2p58_C Putative type III secre 23.3 2.2E+02 0.0075 22.2 6.1 65 5-83 28-92 (116)
350 3eab_A Spastin; spastin, MIT, 23.1 1.4E+02 0.0049 22.6 5.0 46 169-232 6-51 (89)
351 3c3r_A Programmed cell death 6 22.8 3.4E+02 0.012 26.7 9.5 35 280-314 275-309 (380)
352 2wvi_A Mitotic checkpoint seri 22.6 2.9E+02 0.0099 23.6 7.6 77 42-129 43-125 (164)
353 3ax2_A Mitochondrial import re 22.3 79 0.0027 23.0 3.4 27 324-350 21-47 (73)
354 1om2_A Protein (mitochondrial 22.0 1.1E+02 0.0036 23.6 4.2 27 324-350 24-50 (95)
355 2dl1_A Spartin; SPG20, MIT, st 20.3 2.5E+02 0.0084 22.4 6.1 44 309-352 11-54 (116)
356 3mv2_A Coatomer subunit alpha; 20.2 5.8E+02 0.02 24.5 13.1 110 22-131 114-238 (325)
357 3efz_A 14-3-3 protein; 14-3-3, 20.1 5.3E+02 0.018 23.9 18.7 100 119-229 117-226 (268)
No 1
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.7e-37 Score=320.16 Aligned_cols=401 Identities=66% Similarity=1.065 Sum_probs=339.4
Q ss_pred hhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhh
Q psy10738 19 GNMCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLG 98 (609)
Q Consensus 19 a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~ 98 (609)
...|..++..|..++..|++++|+.+|+++++..|.++...+.++..+|.++...|++++|+.++++++.+.+..++.+.
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 85 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG 85 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHH
Confidence 34577888899999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHH
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQE 178 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (609)
.+.++..+|.++...|++++|+.++++++.+.+..++....+.++..+|.+|...|++..........++++++...+++
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~ 165 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQA 165 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999998889999999999999999866666667788899999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 179 AIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 179 A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 258 (609)
|+.++++++.+....++.+..+.++.++|.+|...|++++|+.++++++.+.+..++....+.++.++|.+|...|++++
T Consensus 166 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 245 (406)
T 3sf4_A 166 AVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFET 245 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHH
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHH
Q psy10738 259 ASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEK 338 (609)
Q Consensus 259 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~ 338 (609)
|+.++++++.+.+..++......++..+|.+|...|++++|+.++++++.+.+..++......++..+|.+|...|++++
T Consensus 246 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 325 (406)
T 3sf4_A 246 ASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQ 325 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHH
Confidence 99999999999999988888899999999999999999999999999999999998888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCCCchhhhhhhcccCCCCCCCCCCcchhhhccccccccc
Q psy10738 339 ALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLSPDSLQLINSYANANQPSPGVRRYNRVRRSSMEQLDLI 418 (609)
Q Consensus 339 A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (609)
|+.++++++++.++.++......++..++.++..+|++..+...... .+...+...... .....+|.++++++++
T Consensus 326 A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~----~~~~~~~~l~~~-~~~~~~~~s~~~l~~~ 400 (406)
T 3sf4_A 326 AMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYSTNNSIMS----ENTEIDSSLNGV-RPKLGRRHSMENMELM 400 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCC---------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHhHHHHHHHHH----HHHHHHHHHHhc-Chhcccccccccccce
Confidence 99999999999999999999999999999999999998765443333 222222221122 4456678899999999
Q ss_pred ccCCCc
Q psy10738 419 KLTPEN 424 (609)
Q Consensus 419 ~~~~~~ 424 (609)
+.+|++
T Consensus 401 ~~~~~k 406 (406)
T 3sf4_A 401 KLTPEK 406 (406)
T ss_dssp ------
T ss_pred ecCCCC
Confidence 988864
No 2
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=100.00 E-value=4.4e-32 Score=274.91 Aligned_cols=336 Identities=71% Similarity=1.167 Sum_probs=313.2
Q ss_pred hhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhh
Q psy10738 19 GNMCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLG 98 (609)
Q Consensus 19 a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~ 98 (609)
..+|..++..|..++..|++++|+.+|+++++..|+++...+.++..+|.++...|++++|+.++++++.+.+..++.+.
T Consensus 2 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 81 (338)
T 3ro2_A 2 SASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG 81 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHH
Confidence 35688899999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHH
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQE 178 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (609)
.+.++..+|.++...|++++|+.++++++.+.+..++....+.++..+|.+|...|++..+......+..+.++...+++
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 161 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQA 161 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999998889999999999999999977777777788889999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 179 AIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 179 A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 258 (609)
|+.++++++.+.+..++.+....++.++|.++...|++++|+.++++++.+.+..++......++.++|.++...|++++
T Consensus 162 A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 241 (338)
T 3ro2_A 162 AVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFET 241 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHH
Q psy10738 259 ASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEK 338 (609)
Q Consensus 259 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~ 338 (609)
|+.++++++.+.+..++......++..+|.++...|++++|+.++++++.+.+..++......++..+|.+|...|++++
T Consensus 242 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 321 (338)
T 3ro2_A 242 ASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQ 321 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHH
Confidence 99999999999999888888899999999999999999999999999999999998888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC
Q psy10738 339 ALYFATKHLEISKQLG 354 (609)
Q Consensus 339 A~~~~~~al~l~~~~~ 354 (609)
|..++++++++.++.+
T Consensus 322 A~~~~~~a~~~~~~~~ 337 (338)
T 3ro2_A 322 AMHFAEKHLEISREVG 337 (338)
T ss_dssp HHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999987765
No 3
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-31 Score=280.77 Aligned_cols=338 Identities=72% Similarity=1.207 Sum_probs=315.9
Q ss_pred hhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhh
Q psy10738 19 GNMCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLG 98 (609)
Q Consensus 19 a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~ 98 (609)
...+..+...|..++..|++++|+.+|+++++..|+++...+.++..+|.+|...|++++|+.++++++.+++..++.+.
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 45677788899999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHH
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQE 178 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (609)
.+.++..+|.+|...|++++|+.++++++.+.+..++....+.++.++|.+|...|+.. ....++.+..++...+++
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~---~~~~~~~~~~~a~~~~~~ 201 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHL---GQRNPGKFGDDVKEALTR 201 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH---HHHSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCccc---ccccchhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999988899999999999999998721 133566677888888999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 179 AIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 179 A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 258 (609)
|+.++++++.+....++.+..+.++.++|.+|...|++++|+.++++++.+.+..++......++.++|.+|...|++++
T Consensus 202 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 281 (411)
T 4a1s_A 202 AVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFED 281 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHH
Q psy10738 259 ASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEK 338 (609)
Q Consensus 259 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~ 338 (609)
|+.++++++.+.+..++......++..+|.+|...|++++|+.++++++.+.+..++......++..+|.+|..+|++++
T Consensus 282 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 361 (411)
T 4a1s_A 282 AAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHER 361 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999888888899999999999999999999999999999999998888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCchH
Q psy10738 339 ALYFATKHLEISKQLGDPLGQ 359 (609)
Q Consensus 339 A~~~~~~al~l~~~~~~~~~~ 359 (609)
|+.++++++++.++++++...
T Consensus 362 A~~~~~~al~~~~~~~~~~~~ 382 (411)
T 4a1s_A 362 ALKYAEQHLQLAXXXXXXXXX 382 (411)
T ss_dssp HHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccchhh
Confidence 999999999999877655443
No 4
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.98 E-value=6.2e-29 Score=259.57 Aligned_cols=319 Identities=31% Similarity=0.467 Sum_probs=297.9
Q ss_pred chhhhhhHhhhcCCCcchhHHHHHHHH----------------HHHHHhcCChHHHHHHHHHHHHhCC--cchhHHHHHH
Q psy10738 2 SVGNISSSDSQSGGADGGNMCLELALE----------------GERLCKAGDCRAGVAFFQAAIQAGT--DDLRTLSAIY 63 (609)
Q Consensus 2 ~l~~Lg~~~~~~g~~~~a~~~~~l~~~----------------g~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~a~~~ 63 (609)
++..+|.++...|++++|..++..++. |..++..|++++|+.+|++++...+ .+....+.++
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 90 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKAS 90 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 456789999999999999988865544 7899999999999999999988743 3455668899
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCC--------------------HHHHHHHH
Q psy10738 64 SQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGK--------------------YDEAMVCC 123 (609)
Q Consensus 64 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~--------------------~~~A~~~~ 123 (609)
..+|.++...|++++|+.++++++.+.+..++....+.++..+|.+|...|+ +++|+.++
T Consensus 91 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~ 170 (406)
T 3sf4_A 91 GNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFY 170 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888899999999999999999 99999999
Q ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHH
Q psy10738 124 KRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRAC 203 (609)
Q Consensus 124 ~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 203 (609)
.+++.+.+..++....+.++.++|.+|...|+ +++|+.++++++.+.+..++....+.++
T Consensus 171 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~ 230 (406)
T 3sf4_A 171 EENLSLVTALGDRAAQGRAFGNLGNTHYLLGN--------------------FRDAVIAHEQRLLIAKEFGDKAAERRAY 230 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTB--------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHccC--------------------HHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 99999999999888999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Q psy10738 204 GNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQAC 283 (609)
Q Consensus 204 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 283 (609)
.++|.+|...|++++|+.++++++.+.+..++......++..+|.+|...|++++|+.++++++.+.+..++......++
T Consensus 231 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 310 (406)
T 3sf4_A 231 SNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRAC 310 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 99999999999999999999999999999999888899999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHH
Q psy10738 284 YSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKAL 340 (609)
Q Consensus 284 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~ 340 (609)
..+|.+|...|++++|+.++++++.+.+..++......++..+|.++...|+...+.
T Consensus 311 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 367 (406)
T 3sf4_A 311 WSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYSTN 367 (406)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHhHHHH
Confidence 999999999999999999999999999999998999999999999999999875433
No 5
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.97 E-value=2.1e-27 Score=249.10 Aligned_cols=302 Identities=32% Similarity=0.522 Sum_probs=283.9
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcH
Q psy10738 58 TLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKL 137 (609)
Q Consensus 58 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~ 137 (609)
..+..+..+|..++..|++++|+.++++++.+ ...+....+.++..+|.+|...|++++|+.++++++.+....++..
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~--~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQA--GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh--cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 34667889999999999999999999999997 2334455678999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC--
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN-- 215 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~-- 215 (609)
..+.++..+|.+|...|+ +++|+.++++++.+....++.+....++.++|.+|...|+
T Consensus 124 ~~~~~~~~l~~~~~~~g~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 183 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGR--------------------FDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHL 183 (411)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCccc
Confidence 999999999999999999 9999999999999999999999999999999999999999
Q ss_pred ---------------HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHH
Q psy10738 216 ---------------FKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEA 280 (609)
Q Consensus 216 ---------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 280 (609)
+++|+.++++++.+.+..++......++.++|.+|...|++++|+.++++++.+.+..++.....
T Consensus 184 ~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (411)
T 4a1s_A 184 GQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAER 263 (411)
T ss_dssp HHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 99999999999999999999888899999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHH
Q psy10738 281 QACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQV 360 (609)
Q Consensus 281 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 360 (609)
.++..+|.+|...|++++|+.++++++.+.+..++......++..+|.+|...|++++|+.++++++.+....++.....
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 343 (411)
T 4a1s_A 264 RANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEA 343 (411)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHH
Confidence 99999999999999999999999999999999888888899999999999999999999999999999999999988999
Q ss_pred HHHHHHHHHHHHcCCCCCCCC
Q psy10738 361 TAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 361 ~a~~~la~l~~~~g~~~~al~ 381 (609)
.++..++.++...|+...|+.
T Consensus 344 ~~~~~la~~~~~~g~~~~A~~ 364 (411)
T 4a1s_A 344 RACWSLGNAHSAIGGHERALK 364 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999877654
No 6
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.97 E-value=5.4e-27 Score=237.34 Aligned_cols=300 Identities=31% Similarity=0.506 Sum_probs=281.7
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
...+...|..+...|++++|+.++++++.. ...+....+.++..+|.++...|++++|+.++++++.+.+..++....
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~--~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQV--GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhh--CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 346778899999999999999999999997 233445557899999999999999999999999999999999998899
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC----
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN---- 215 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~---- 215 (609)
+.++..+|.+|...|+ +++|+.++++++.+.+..++....+.++.++|.++...|+
T Consensus 83 ~~~~~~l~~~~~~~g~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 142 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGN--------------------FDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGC 142 (338)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHccC--------------------HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCccccc
Confidence 9999999999999999 9999999999999999999999999999999999999999
Q ss_pred ----------------HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 216 ----------------FKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVE 279 (609)
Q Consensus 216 ----------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 279 (609)
+++|+.++++++.+.+..++......++.++|.++...|++++|+.++++++.+.+..++....
T Consensus 143 ~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 222 (338)
T 3ro2_A 143 PGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAE 222 (338)
T ss_dssp SSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHH
Confidence 9999999999999999999888889999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchH
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQ 359 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~ 359 (609)
..++..+|.++...|++++|+.++++++.+.+..++......++..+|.++...|++++|+.++++++.+....++....
T Consensus 223 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 302 (338)
T 3ro2_A 223 RRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGE 302 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 99999999999999999999999999999999988888889999999999999999999999999999999999998899
Q ss_pred HHHHHHHHHHHHHcCCCCCCCC
Q psy10738 360 VTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 360 ~~a~~~la~l~~~~g~~~~al~ 381 (609)
..++..++.++...|+...|..
T Consensus 303 ~~~~~~la~~~~~~g~~~~A~~ 324 (338)
T 3ro2_A 303 GRACWSLGNAYTALGNHDQAMH 324 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHH
Confidence 9999999999999999776644
No 7
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.96 E-value=2.5e-28 Score=254.47 Aligned_cols=312 Identities=23% Similarity=0.248 Sum_probs=207.2
Q ss_pred hhhhhhHhhhcCCCcchhHHHHHH------------HHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHH
Q psy10738 3 VGNISSSDSQSGGADGGNMCLELA------------LEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAY 70 (609)
Q Consensus 3 l~~Lg~~~~~~g~~~~a~~~~~l~------------~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~ 70 (609)
+..+|.++...|+++++..++..+ ..|..+...|++++|+..|++++...|++.. ++..+|.++
T Consensus 36 ~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~l~~~~ 111 (388)
T 1w3b_A 36 LLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFID----GYINLAAAL 111 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHH----HHHHHHHHH
Confidence 456777777788877777666433 3378888888888888888888888877643 677788888
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Q psy10738 71 FYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVY 150 (609)
Q Consensus 71 ~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~ 150 (609)
...|++++|+..+++++.. .|....++..+|.++...|++++|+.+|++++...+ ....++.++|.++
T Consensus 112 ~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~ 179 (388)
T 1w3b_A 112 VAAGDMEGAVQAYVSALQY------NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP------NFAVAWSNLGCVF 179 (388)
T ss_dssp HHHSCSSHHHHHHHHHHHH------CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHH
Confidence 8888888888888887776 556666777777777777778778777777776644 3455777777777
Q ss_pred HHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy10738 151 HAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIA 230 (609)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 230 (609)
...|+ +++|+.+|++++.+ .+....++.++|.++...|++++|+..+++++.+.
T Consensus 180 ~~~g~--------------------~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 233 (388)
T 1w3b_A 180 NAQGE--------------------IWLAIHHFEKAVTL------DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS 233 (388)
T ss_dssp HTTTC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC
T ss_pred HHcCC--------------------HHHHHHHHHHHHhc------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 77777 77777777777765 23334566666777766777777777766666654
Q ss_pred HHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q psy10738 231 REFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 310 (609)
Q Consensus 231 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 310 (609)
+.. ..++.++|.++...|++++|+.+|++++.+.+.. ..++..+|.++...|++++|+.++++++.+.
T Consensus 234 p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 301 (388)
T 1w3b_A 234 PNH------AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHF------PDAYCNLANALKEKGSVAEAEDCYNTALRLC 301 (388)
T ss_dssp TTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC
T ss_pred cCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 322 1255666666666666666666666666544321 3456666666666666666666666666553
Q ss_pred HHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCC
Q psy10738 311 QQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDL 380 (609)
Q Consensus 311 ~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al 380 (609)
+. ...++..+|.++...|++++|+.++++++++. +....++..++.++...|+..+|+
T Consensus 302 p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~g~~~~A~ 359 (388)
T 1w3b_A 302 PT------HADSLNNLANIKREQGNIEEAVRLYRKALEVF------PEFAAAHSNLASVLQQQGKLQEAL 359 (388)
T ss_dssp TT------CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC------TTCHHHHHHHHHHHHTTTCCHHHH
T ss_pred cc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCcHHHHHHHHHHHHHcCCHHHHH
Confidence 32 23355566666666666666666666665432 334555666666666666655443
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.96 E-value=5.3e-28 Score=252.01 Aligned_cols=312 Identities=21% Similarity=0.198 Sum_probs=273.1
Q ss_pred hhhhhhHhhhcCCCcchhHHHHHHH------------HHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHH
Q psy10738 3 VGNISSSDSQSGGADGGNMCLELAL------------EGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAY 70 (609)
Q Consensus 3 l~~Lg~~~~~~g~~~~a~~~~~l~~------------~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~ 70 (609)
+..+|..+.+.|++++|..++..+. .|.++...|++++|+.+++++++..|.+. .++..+|.++
T Consensus 2 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~----~~~~~lg~~~ 77 (388)
T 1w3b_A 2 PMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLA----EAYSNLGNVY 77 (388)
T ss_dssp CCTHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHH
T ss_pred hhhHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch----HHHHHHHHHH
Confidence 3457888999999999988775543 48899999999999999999999999874 4899999999
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Q psy10738 71 FYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVY 150 (609)
Q Consensus 71 ~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~ 150 (609)
...|++++|+.+|++++.+ .|....++..+|.++...|++++|+..|++++.+.+ ....++..+|.++
T Consensus 78 ~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~ 145 (388)
T 1w3b_A 78 KERGQLQEAIEHYRHALRL------KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNP------DLYCVRSDLGNLL 145 (388)
T ss_dssp HHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCT------TCTHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHc------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHH
Confidence 9999999999999999998 677788999999999999999999999999998765 4456888999999
Q ss_pred HHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy10738 151 HAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIA 230 (609)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 230 (609)
...|+ +++|+.+|++++.. .+....++.++|.++...|++++|+.+|++++.+.
T Consensus 146 ~~~g~--------------------~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 199 (388)
T 1w3b_A 146 KALGR--------------------LEEAKACYLKAIET------QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD 199 (388)
T ss_dssp HTTSC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHccC--------------------HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 99999 99999999999886 34456789999999999999999999999999876
Q ss_pred HHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q psy10738 231 REFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 310 (609)
Q Consensus 231 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 310 (609)
+.. ..++.++|.++...|++++|+..+++++.+.+.. ..++..+|.++...|++++|+.++++++.+.
T Consensus 200 p~~------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 267 (388)
T 1w3b_A 200 PNF------LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNH------AVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 267 (388)
T ss_dssp TTC------HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 543 2388999999999999999999999999886643 6788999999999999999999999999875
Q ss_pred HHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCC
Q psy10738 311 QQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDL 380 (609)
Q Consensus 311 ~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al 380 (609)
+. ...++..+|.++...|++++|+.++++++++. +....++..++.++...|+...|+
T Consensus 268 p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~g~~~~A~ 325 (388)
T 1w3b_A 268 PH------FPDAYCNLANALKEKGSVAEAEDCYNTALRLC------PTHADSLNNLANIKREQGNIEEAV 325 (388)
T ss_dssp SS------CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred CC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------cccHHHHHHHHHHHHHcCCHHHHH
Confidence 43 34578999999999999999999999999875 455778899999999999876554
No 9
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.96 E-value=5.9e-26 Score=236.37 Aligned_cols=270 Identities=14% Similarity=0.104 Sum_probs=248.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-cHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLND-KLSE 139 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d-~~~~ 139 (609)
..++.+|.++...|++++|+.++++++.+++..++.+..+.++..+|.+|...|++++|+.++.+++++.+..++ ....
T Consensus 104 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 183 (383)
T 3ulq_A 104 YFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRL 183 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHH
Confidence 356679999999999999999999999999999999999999999999999999999999999999999999887 7788
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQA 219 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 219 (609)
+.++.++|.+|...|+ +++|+.++++++.+.+..++....+.++.++|.+|..+|++++|
T Consensus 184 ~~~~~~lg~~~~~~g~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 243 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQ--------------------YEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDA 243 (383)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcC--------------------HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHH
Confidence 9999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 220 IYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 299 (609)
Q Consensus 220 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 299 (609)
+.++++++.+.+...+......++.++|.+|...|++++|+.++++++.+.+..+++..... +..+|.+|...|++
T Consensus 244 ~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~l~~~~~~~~~~--- 319 (383)
T 3ulq_A 244 IPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSE-FEFLKSLYLSGPDE--- 319 (383)
T ss_dssp HHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHTSSCCH---
T ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHhCCCcH---
Confidence 99999999999998875566889999999999999999999999999999999888766665 67799999999996
Q ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCC
Q psy10738 300 IDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGD 355 (609)
Q Consensus 300 ~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~ 355 (609)
..+.+++.+..+.+.......++..+|.+|...|++++|..++++++++.+++..
T Consensus 320 -~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~~ 374 (383)
T 3ulq_A 320 -EAIQGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQG 374 (383)
T ss_dssp -HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCSS
T ss_pred -HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhc
Confidence 5666677777777777778889999999999999999999999999999987765
No 10
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.95 E-value=4.1e-25 Score=229.94 Aligned_cols=331 Identities=12% Similarity=0.013 Sum_probs=275.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCC---cchhHHHHHHHHH--HHHHHHhCCHHHHH-----------HHHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGT---DDLRTLSAIYSQL--GNAYFYLGDYQKAM-----------QYHKQD 86 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~a~~~~~l--g~~~~~~g~~~~A~-----------~~~~~a 86 (609)
-.++.....+...+++++|..+++++.+.-+ .+.... .|+.+ .......+++..+. ..+++.
T Consensus 13 ~~~l~~w~~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~--~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~~~~i 90 (383)
T 3ulq_A 13 GEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLH--LYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEI 90 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSCCCHHHH--HHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhccchHHH--HHHHHHHHHHHHHHhhcCcccccccccccchhhHHHHH
Confidence 4455567788899999999999999876432 233322 22322 22233344444444 444443
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCC
Q psy10738 87 LTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPG 166 (609)
Q Consensus 87 l~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~ 166 (609)
-.. ....+.......++.+|.++...|++++|+.++++++.+.+..++....+.+++.+|.+|...|+
T Consensus 91 ~~~-~~~~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~----------- 158 (383)
T 3ulq_A 91 DKK-QARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQ----------- 158 (383)
T ss_dssp HHH-THHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTC-----------
T ss_pred Hhc-CCCchhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCC-----------
Confidence 221 11111222344667799999999999999999999999999888888899999999999999999
Q ss_pred CCchHhHHhHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Q psy10738 167 EYPEEVKVCLQEAIKYYEQNLALMKEIND-TAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSN 245 (609)
Q Consensus 167 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 245 (609)
+++|+.++.+++++.+..++ .+..+.++.++|.+|..+|++++|+.++++++++.+..++....+.++.+
T Consensus 159 ---------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 229 (383)
T 3ulq_A 159 ---------TYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYN 229 (383)
T ss_dssp ---------HHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 99999999999999999887 78889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHH
Q psy10738 246 LGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWS 325 (609)
Q Consensus 246 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 325 (609)
+|.+|..+|++++|+.++++++.+.+..++....+.++..+|.+|...|++++|+.++++++.+.+..+++..... +..
T Consensus 230 lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~ 308 (383)
T 3ulq_A 230 IGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSE-FEF 308 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH-HHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH-HHH
Confidence 9999999999999999999999999988875667999999999999999999999999999999999888766655 677
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q psy10738 326 LGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 326 La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~ 381 (609)
+|.+|...|++ ..+.+++.+.++.+..+....++..+|.++...|++..|+.
T Consensus 309 l~~~~~~~~~~----~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~ 360 (383)
T 3ulq_A 309 LKSLYLSGPDE----EAIQGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASA 360 (383)
T ss_dssp HHHHHTSSCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhCCCcH----HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999997 56777777888888888889999999999999999887764
No 11
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.95 E-value=9.8e-26 Score=230.72 Aligned_cols=317 Identities=14% Similarity=0.097 Sum_probs=253.1
Q ss_pred chhhhhhHhhhcCCCcchhHHHHHHHH------------HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHH
Q psy10738 2 SVGNISSSDSQSGGADGGNMCLELALE------------GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNA 69 (609)
Q Consensus 2 ~l~~Lg~~~~~~g~~~~a~~~~~l~~~------------g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~ 69 (609)
++..+|.++...|++++|..++..++. |.++...|++++|+..|+++++..|.+. .++..+|.+
T Consensus 5 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~l~~~ 80 (359)
T 3ieg_A 5 KHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFT----AARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcc----hHHHHHHHH
Confidence 356788999999999999988876554 8889999999999999999999988774 478899999
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHcCChh---hHHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHHHHHHcC
Q psy10738 70 YFYLGDYQKAMQYHKQDLTLARNMEDKL---GEAKSSGNL------------GNTLKVMGKYDEAMVCCKRHLEISRQLN 134 (609)
Q Consensus 70 ~~~~g~~~~A~~~~~~al~~~~~~~d~~---~~~~a~~~l------------g~~~~~~g~~~~A~~~~~~al~l~~~~~ 134 (609)
+...|++++|+.++++++.. .+ ....++..+ |.++...|++++|+.++++++...+
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--- 151 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKS------NPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCV--- 151 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---
T ss_pred HHHcCChHHHHHHHHHHHhc------CCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---
Confidence 99999999999999998876 34 444455444 7889999999999999999988765
Q ss_pred CcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC
Q psy10738 135 DKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG 214 (609)
Q Consensus 135 d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 214 (609)
....++..+|.++...|+ +++|+.++++++.. .+....++..+|.++...|
T Consensus 152 ---~~~~~~~~~~~~~~~~~~--------------------~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~ 202 (359)
T 3ieg_A 152 ---WDAELRELRAECFIKEGE--------------------PRKAISDLKAASKL------KSDNTEAFYKISTLYYQLG 202 (359)
T ss_dssp ---TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHTT------CSCCHHHHHHHHHHHHHHT
T ss_pred ---CchHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcC
Confidence 345688899999999999 99999999988876 2334568889999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhCChHH------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q psy10738 215 NFKQAIYYHQERLKIAREFGDKAA------ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGN 288 (609)
Q Consensus 215 ~~~~A~~~~~~al~~~~~~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 288 (609)
++++|+.+++++++..+....... .......+|.++...|++++|+.++++++...+. +......++..+|.
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~la~ 280 (359)
T 3ieg_A 203 DHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKERICH 280 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHH
Confidence 999999999999877554322111 0122446688899999999999999999887643 34444567788999
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q psy10738 289 TYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTD 368 (609)
Q Consensus 289 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~ 368 (609)
++...|++++|+.++++++...+. ...++..+|.++...|++++|+.++++++++. +....++..++.
T Consensus 281 ~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~------p~~~~~~~~l~~ 348 (359)
T 3ieg_A 281 CFSKDEKPVEAIRICSEVLQMEPD------NVNALKDRAEAYLIEEMYDEAIQDYEAAQEHN------ENDQQIREGLEK 348 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------TTCHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCcc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCChHHHHHHHH
Confidence 999999999999999999887433 35588899999999999999999999998865 455667777777
Q ss_pred HHHHcC
Q psy10738 369 LRKALG 374 (609)
Q Consensus 369 l~~~~g 374 (609)
++..++
T Consensus 349 ~~~~~~ 354 (359)
T 3ieg_A 349 AQRLLK 354 (359)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.94 E-value=1.4e-24 Score=225.54 Aligned_cols=270 Identities=16% Similarity=0.071 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-cH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLND-KL 137 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d-~~ 137 (609)
....++.+|..++..|++++|+.++++++.+....++.+..+.++.++|.+|...|++++|+.++++++++.+..++ ..
T Consensus 100 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 179 (378)
T 3q15_A 100 KYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSI 179 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchh
Confidence 34467889999999999999999999999999999999999999999999999999999999999999999998876 55
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFK 217 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 217 (609)
..+.++.++|.+|...|+ +++|+.++++++.+.+..++....+.++.++|.+|..+|+++
T Consensus 180 ~~~~~~~~lg~~y~~~~~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~ 239 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKH--------------------YDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQ 239 (378)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred hHHHHHHHHHHHHHHhCC--------------------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHH
Confidence 789999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHH
Q psy10738 218 QAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP 297 (609)
Q Consensus 218 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 297 (609)
+|+.++++++.+.+...++.. ..++.++|.++...|++++|+.++++++.+.+..+++.... .+..++.+|...++.
T Consensus 240 ~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~l~~ly~~~~~~- 316 (378)
T 3q15_A 240 MAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKE-LFLFLQAVYKETVDE- 316 (378)
T ss_dssp HHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHH-HHHHHHHHHSSSCCH-
T ss_pred HHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHhCCCcH-
Confidence 999999999999998877766 88999999999999999999999999999988776655444 467888899888884
Q ss_pred HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcC
Q psy10738 298 TAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLG 354 (609)
Q Consensus 298 ~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~ 354 (609)
..+.+++....+.+.......++..+|.+|...|++++|..+|++++++.+++.
T Consensus 317 ---~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~ 370 (378)
T 3q15_A 317 ---RKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDIL 370 (378)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 344455555555556666778889999999999999999999999999887653
No 13
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.94 E-value=7.9e-26 Score=228.94 Aligned_cols=292 Identities=18% Similarity=0.192 Sum_probs=252.6
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
+...|..++..|++++|+.+|+++++..|.+.. ++..++.++...|++++|+.++++++.. .+....++.
T Consensus 25 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~----~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~ 94 (330)
T 3hym_B 25 VVSLAERHYYNCDFKMCYKLTSVVMEKDPFHAS----CLPVHIGTLVELNKANELFYLSHKLVDL------YPSNPVSWF 94 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT----THHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTSTHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChh----hHHHHHHHHHHhhhHHHHHHHHHHHHHh------CcCCHHHHH
Confidence 445689999999999999999999999998755 6778889999999999999999999998 677788999
Q ss_pred HHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHH
Q psy10738 105 NLGNTLKVMG-KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYY 183 (609)
Q Consensus 105 ~lg~~~~~~g-~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 183 (609)
.+|.++...| ++++|+.++++++.+.+ ....++..+|.++...|+ +++|+.++
T Consensus 95 ~l~~~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~--------------------~~~A~~~~ 148 (330)
T 3hym_B 95 AVGCYYLMVGHKNEHARRYLSKATTLEK------TYGPAWIAYGHSFAVESE--------------------HDQAMAAY 148 (330)
T ss_dssp HHHHHHHHSCSCHHHHHHHHHHHHTTCT------TCTHHHHHHHHHHHHHTC--------------------HHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHccC--------------------HHHHHHHH
Confidence 9999999999 99999999999998765 345679999999999999 99999999
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q psy10738 184 EQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHY 263 (609)
Q Consensus 184 ~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 263 (609)
++++.+.+ ....++..+|.++...|++++|+.++++++...+.. ..++..+|.++...|++++|+.++
T Consensus 149 ~~a~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~ 216 (330)
T 3hym_B 149 FTAAQLMK------GCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED------PFVMHEVGVVAFQNGEWKTAEKWF 216 (330)
T ss_dssp HHHHHHTT------TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHhcc------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC------hHHHHHHHHHHHHcccHHHHHHHH
Confidence 99998743 234567789999999999999999999999876543 348899999999999999999999
Q ss_pred HHHHHHHHHcCCc---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHH
Q psy10738 264 KRTLVLAQDLGDR---AVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKAL 340 (609)
Q Consensus 264 ~~al~~~~~~~~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~ 340 (609)
++++.+.+..++. .....++..+|.++...|++++|+.++++++.+.+. ...++..+|.++...|++++|.
T Consensus 217 ~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~g~~~~A~ 290 (330)
T 3hym_B 217 LDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ------NASTYSAIGYIHSLMGNFENAV 290 (330)
T ss_dssp HHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CSHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc------chHHHHHHHHHHHHhccHHHHH
Confidence 9999998665433 223568899999999999999999999999988654 3458999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHH-HHcCCC
Q psy10738 341 YFATKHLEISKQLGDPLGQVTAQMNVTDLR-KALGMS 376 (609)
Q Consensus 341 ~~~~~al~l~~~~~~~~~~~~a~~~la~l~-~~~g~~ 376 (609)
.++++++++. +....++..++.++ ...|+.
T Consensus 291 ~~~~~al~~~------p~~~~~~~~l~~~~~~~~g~~ 321 (330)
T 3hym_B 291 DYFHTALGLR------RDDTFSVTMLGHCIEMYIGDS 321 (330)
T ss_dssp HHHHTTTTTC------SCCHHHHHHHHHHHHTTTTC-
T ss_pred HHHHHHHccC------CCchHHHHHHHHHHHHHhCch
Confidence 9999998764 56678899999988 556653
No 14
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.94 E-value=3.6e-25 Score=240.33 Aligned_cols=324 Identities=15% Similarity=0.105 Sum_probs=273.5
Q ss_pred chhhhhhHhhhcCCCcchhHHHHHHHH------------HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHH
Q psy10738 2 SVGNISSSDSQSGGADGGNMCLELALE------------GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNA 69 (609)
Q Consensus 2 ~l~~Lg~~~~~~g~~~~a~~~~~l~~~------------g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~ 69 (609)
++..+|..+...|++++|+.++..++. |.++...|++++|+..|+++++.+|++.. ++..+|.+
T Consensus 27 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~la~~ 102 (537)
T 3fp2_A 27 QLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSK----ALLRRASA 102 (537)
T ss_dssp HHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHH----HHHHHHHH
Confidence 467889999999999999999987665 89999999999999999999999998854 88999999
Q ss_pred HHHhCCHHHHHHHHHHHH--------------------------------------------------------------
Q psy10738 70 YFYLGDYQKAMQYHKQDL-------------------------------------------------------------- 87 (609)
Q Consensus 70 ~~~~g~~~~A~~~~~~al-------------------------------------------------------------- 87 (609)
+...|++++|+..++ ++
T Consensus 103 ~~~~g~~~~A~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (537)
T 3fp2_A 103 NESLGNFTDAMFDLS-VLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVS 181 (537)
T ss_dssp HHHHTCHHHHHHHHH-HHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHH
T ss_pred HHHcCCHHHHHHHHH-HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHH
Confidence 999999999998773 33
Q ss_pred -----------------------------------------HHHHHc----CC----hhhHHHHHHHHHHHHHHcCCHHH
Q psy10738 88 -----------------------------------------TLARNM----ED----KLGEAKSSGNLGNTLKVMGKYDE 118 (609)
Q Consensus 88 -----------------------------------------~~~~~~----~d----~~~~~~a~~~lg~~~~~~g~~~~ 118 (609)
..+.+. .+ ....+.++..+|.++...|++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 261 (537)
T 3fp2_A 182 SVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLD 261 (537)
T ss_dssp TSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHH
Confidence 111110 00 11125578889999999999999
Q ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHH
Q psy10738 119 AMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAA 198 (609)
Q Consensus 119 A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 198 (609)
|+.++++++.+.+ . ..++..+|.++...|+ +++|+.++++++... +.
T Consensus 262 A~~~~~~~~~~~~------~-~~~~~~l~~~~~~~~~--------------------~~~A~~~~~~~~~~~------~~ 308 (537)
T 3fp2_A 262 AQVLLQESINLHP------T-PNSYIFLALTLADKEN--------------------SQEFFKFFQKAVDLN------PE 308 (537)
T ss_dssp HHHHHHHHHHHCC------C-HHHHHHHHHHTCCSSC--------------------CHHHHHHHHHHHHHC------TT
T ss_pred HHHHHHHHHhcCC------C-chHHHHHHHHHHHhcC--------------------HHHHHHHHHHHhccC------CC
Confidence 9999999998754 2 5788899999999999 999999999998873 33
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHH
Q psy10738 199 QGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAV 278 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 278 (609)
...++..+|.++...|++++|+.++++++.+.+.... ++..+|.++...|++++|+.++++++...+..
T Consensus 309 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~------~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~----- 377 (537)
T 3fp2_A 309 YPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVY------PYIQLACLLYKQGKFTESEAFFNETKLKFPTL----- 377 (537)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSH------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Confidence 4568999999999999999999999999998665443 88999999999999999999999999886543
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHc----------CChHHHHHHHHHHHH
Q psy10738 279 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAAR----------GNHEKALYFATKHLE 348 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~----------g~~~~A~~~~~~al~ 348 (609)
..++..+|.++...|++++|+.++++++.+.+...........+..+|.++... |++++|+.+++++++
T Consensus 378 -~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 456 (537)
T 3fp2_A 378 -PEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACE 456 (537)
T ss_dssp -THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999988766555555678889999999 999999999999998
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q psy10738 349 ISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 349 l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~ 381 (609)
+. +....++..+|.++...|+...|+.
T Consensus 457 ~~------p~~~~~~~~l~~~~~~~g~~~~A~~ 483 (537)
T 3fp2_A 457 LD------PRSEQAKIGLAQLKLQMEKIDEAIE 483 (537)
T ss_dssp HC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hC------CCCHHHHHHHHHHHHHhccHHHHHH
Confidence 75 4556889999999999999877654
No 15
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.94 E-value=2.6e-25 Score=235.92 Aligned_cols=318 Identities=14% Similarity=0.096 Sum_probs=256.9
Q ss_pred chhhhhhHhhhcCCCcchhHHHHHHHH------------HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHH
Q psy10738 2 SVGNISSSDSQSGGADGGNMCLELALE------------GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNA 69 (609)
Q Consensus 2 ~l~~Lg~~~~~~g~~~~a~~~~~l~~~------------g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~ 69 (609)
++..+|..+...|++++|..++..++. |.++...|++++|+..|+++++..|.+. .++..+|.+
T Consensus 28 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~l~~~ 103 (450)
T 2y4t_A 28 KHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFT----AARLQRGHL 103 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcH----HHHHHHHHH
Confidence 356788999999999999888876543 8889999999999999999999998874 478899999
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHcCChhhHH---HH------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Q psy10738 70 YFYLGDYQKAMQYHKQDLTLARNMEDKLGEA---KS------------SGNLGNTLKVMGKYDEAMVCCKRHLEISRQLN 134 (609)
Q Consensus 70 ~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~---~a------------~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 134 (609)
|...|++++|+.++++++.. .+... .+ +..+|.++...|++++|+.++++++.+.+
T Consensus 104 ~~~~g~~~~A~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--- 174 (450)
T 2y4t_A 104 LLKQGKLDEAEDDFKKVLKS------NPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV--- 174 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---
T ss_pred HHHcCCHHHHHHHHHHHHhc------CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---
Confidence 99999999999999998875 22222 33 44557789999999999999999988755
Q ss_pred CcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC
Q psy10738 135 DKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG 214 (609)
Q Consensus 135 d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 214 (609)
....++..+|.+|...|+ +++|+.++++++... +....++..+|.+|...|
T Consensus 175 ---~~~~~~~~l~~~~~~~g~--------------------~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~g 225 (450)
T 2y4t_A 175 ---WDAELRELRAECFIKEGE--------------------PRKAISDLKAASKLK------NDNTEAFYKISTLYYQLG 225 (450)
T ss_dssp ---TCHHHHHHHHHHHHHTTC--------------------GGGGHHHHHHHHHHH------CSCHHHHHHHHHHHHHTT
T ss_pred ---CChHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcC
Confidence 445688999999999999 999999999998873 333578999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhCChHH------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q psy10738 215 NFKQAIYYHQERLKIAREFGDKAA------ERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGN 288 (609)
Q Consensus 215 ~~~~A~~~~~~al~~~~~~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 288 (609)
++++|+.++++++.+.+....... .......+|.++...|++++|+.+|++++.+.+. +......++..+|.
T Consensus 226 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~ 303 (450)
T 2y4t_A 226 DHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICH 303 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHH
Confidence 999999999999876543221110 0112345599999999999999999999986543 33344668899999
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q psy10738 289 TYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTD 368 (609)
Q Consensus 289 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~ 368 (609)
++...|++++|+.++++++.+.+. ...++..+|.++...|++++|+.++++++++. +....++..++.
T Consensus 304 ~~~~~g~~~~A~~~~~~a~~~~p~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~ 371 (450)
T 2y4t_A 304 CFSKDEKPVEAIRVCSEVLQMEPD------NVNALKDRAEAYLIEEMYDEAIQDYETAQEHN------ENDQQIREGLEK 371 (450)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS------SSCHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCcc------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------cchHHHHHHHHH
Confidence 999999999999999999987543 34689999999999999999999999999864 455778888887
Q ss_pred HHHHcCC
Q psy10738 369 LRKALGM 375 (609)
Q Consensus 369 l~~~~g~ 375 (609)
+....+.
T Consensus 372 ~~~~~~~ 378 (450)
T 2y4t_A 372 AQRLLKQ 378 (450)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 7766654
No 16
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.94 E-value=4.4e-23 Score=213.55 Aligned_cols=325 Identities=13% Similarity=0.001 Sum_probs=271.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcc-hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDD-LRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
......|..+...|++++|+.++++++...|.+ +.....++..+|.++...|++++|+.++++++.+.+..++....+.
T Consensus 15 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (373)
T 1hz4_A 15 EFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALW 94 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 345667999999999999999999999987644 3446678899999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCc--HHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDK--LSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEA 179 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~--~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A 179 (609)
++.++|.++...|++++|+.++++++.+.+..++. .....++.++|.++...|+ +++|
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------------~~~A 154 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWAR--------------------LDEA 154 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTC--------------------HHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcC--------------------HHHH
Confidence 99999999999999999999999999999987765 5678889999999999999 9999
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHhCCHHH
Q psy10738 180 IKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDK-AAERRANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 180 ~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~ 258 (609)
..++++++.+.+..++.. ...++.++|.++...|++++|..++++++.+.+..+.. .........++.++...|++++
T Consensus 155 ~~~~~~al~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 233 (373)
T 1hz4_A 155 EASARSGIEVLSSYQPQQ-QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAA 233 (373)
T ss_dssp HHHHHHHHHHTTTSCGGG-GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhhccCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHH
Confidence 999999999887665544 56789999999999999999999999999987665443 2222233355667889999999
Q ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHH
Q psy10738 259 ASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEK 338 (609)
Q Consensus 259 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~ 338 (609)
|..++.+++...+. ........+..+|.++...|++++|...+++++...+..+.......++..+|.++...|++++
T Consensus 234 A~~~~~~a~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 311 (373)
T 1hz4_A 234 AANWLRHTAKPEFA--NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSD 311 (373)
T ss_dssp HHHHHHHSCCCCCT--TCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHhCCCCCCC--cchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHH
Confidence 99999998764321 1122233567899999999999999999999999998877766677799999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q psy10738 339 ALYFATKHLEISKQLGDPLGQVTAQMNVTDLR 370 (609)
Q Consensus 339 A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~ 370 (609)
|..++++++.+....+........-..+..++
T Consensus 312 A~~~l~~al~~~~~~g~~~~~~~~g~~~~~ll 343 (373)
T 1hz4_A 312 AQRVLLDALKLANRTGFISHFVIEGEAMAQQL 343 (373)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHccHHHHHHH
Confidence 99999999999988776654443333344443
No 17
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.94 E-value=2.2e-24 Score=220.71 Aligned_cols=308 Identities=15% Similarity=0.114 Sum_probs=254.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|..++..|++++|+.+|+++++..|.++ .++..+|.++...|++++|+.++++++.. .+....++
T Consensus 5 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~ 74 (359)
T 3ieg_A 5 KHLELGKKLLAAGQLADALSQFHAAVDGDPDNY----IAYYRRATVFLAMGKSKAALPDLTKVIAL------KMDFTAAR 74 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccH----HHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCcchHH
Confidence 456679999999999999999999999999875 48899999999999999999999999998 66677899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHH---HcCCcH------HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISR---QLNDKL------SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKV 174 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~---~~~d~~------~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 174 (609)
..+|.++...|++++|+.++++++.+.+ ...... .....+..+|.++...|+
T Consensus 75 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~------------------- 135 (359)
T 3ieg_A 75 LQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGAD------------------- 135 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccC-------------------
Confidence 9999999999999999999999987644 211100 011223445899999999
Q ss_pred hHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC
Q psy10738 175 CLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLG 254 (609)
Q Consensus 175 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 254 (609)
+++|+.++++++... +....++..+|.++...|++++|+.++++++...+.. ..++..+|.++...|
T Consensus 136 -~~~A~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~ 202 (359)
T 3ieg_A 136 -YTAAITFLDKILEVC------VWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDN------TEAFYKISTLYYQLG 202 (359)
T ss_dssp -HHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCC------HHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHhC------CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcC
Confidence 999999999998873 3345789999999999999999999999998874432 248899999999999
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHH------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Q psy10738 255 EYQAASEHYKRTLVLAQDLGDRAV------EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGN 328 (609)
Q Consensus 255 ~~~~A~~~~~~al~~~~~~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~ 328 (609)
++++|+.++++++...+....... .......+|.++...|++++|+.++++++...+. +......++..+|.
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~la~ 280 (359)
T 3ieg_A 203 DHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKERICH 280 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHH
Confidence 999999999999987654321110 1112346699999999999999999999987654 33445567889999
Q ss_pred HHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q psy10738 329 AHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 329 ~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~ 381 (609)
++...|++++|+.++++++++. +....++..+|.++...|+...|+.
T Consensus 281 ~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~A~~ 327 (359)
T 3ieg_A 281 CFSKDEKPVEAIRICSEVLQME------PDNVNALKDRAEAYLIEEMYDEAIQ 327 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhC------cccHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999874 4557899999999999999877654
No 18
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.93 E-value=4.6e-25 Score=227.37 Aligned_cols=282 Identities=17% Similarity=0.158 Sum_probs=236.8
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
++..|..++..|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.+ .+....++.
T Consensus 67 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~~~~~~~~~ 136 (368)
T 1fch_A 67 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHM----EAWQYLGTTQAENEQELLAISALRRCLEL------KPDNQTALM 136 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHCcCHHHHHHHHHHHHhc------CCCCHHHHH
Confidence 55679999999999999999999999999874 48899999999999999999999999998 667788999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHH----------HHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLS----------EGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKV 174 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~----------~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 174 (609)
.+|.++...|++++|+.++++++.+.+....... ....+..++.++ ..|+
T Consensus 137 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------- 196 (368)
T 1fch_A 137 ALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSL------------------- 196 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-HHHH-------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-hccc-------------------
Confidence 9999999999999999999999987654322111 112223567776 8888
Q ss_pred hHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC
Q psy10738 175 CLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLG 254 (609)
Q Consensus 175 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 254 (609)
+++|+.++++++.+.+... ...++.++|.++...|++++|+.++++++.+.+.. ..++.++|.++...|
T Consensus 197 -~~~A~~~~~~a~~~~p~~~----~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~g 265 (368)
T 1fch_A 197 -FLEVKELFLAAVRLDPTSI----DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND------YLLWNKLGATLANGN 265 (368)
T ss_dssp -HHHHHHHHHHHHHHSTTSC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHhCcCcc----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHHcC
Confidence 9999999999998732211 46789999999999999999999999999875433 248899999999999
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhh-----HHHHHHHHHHH
Q psy10738 255 EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVG-----EGRACWSLGNA 329 (609)
Q Consensus 255 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-----~~~~~~~La~~ 329 (609)
++++|+.+|++++.+.+.. ..++..+|.+|...|++++|+.++++++.+.+...++.. ...++..+|.+
T Consensus 266 ~~~~A~~~~~~al~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (368)
T 1fch_A 266 QSEEAVAAYRRALELQPGY------IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLA 339 (368)
T ss_dssp CHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHH
Confidence 9999999999999886542 678999999999999999999999999999887633322 26789999999
Q ss_pred HHHcCChHHHHHHHHHHHHHHHHc
Q psy10738 330 HAARGNHEKALYFATKHLEISKQL 353 (609)
Q Consensus 330 ~~~~g~~~~A~~~~~~al~l~~~~ 353 (609)
|..+|++++|..+++++++.+++.
T Consensus 340 ~~~~g~~~~A~~~~~~~l~~~~~~ 363 (368)
T 1fch_A 340 LSMLGQSDAYGAADARDLSTLLTM 363 (368)
T ss_dssp HHHHTCGGGHHHHHTTCHHHHHHH
T ss_pred HHHhCChHhHHHhHHHHHHHHHHh
Confidence 999999999999999999887643
No 19
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.7e-24 Score=238.43 Aligned_cols=323 Identities=14% Similarity=0.100 Sum_probs=240.7
Q ss_pred hhhhhhHhhhcCCCcchhHHHH----------------------------HHHHHHHHHhcCChHHHHHHHHHHHHhCCc
Q psy10738 3 VGNISSSDSQSGGADGGNMCLE----------------------------LALEGERLCKAGDCRAGVAFFQAAIQAGTD 54 (609)
Q Consensus 3 l~~Lg~~~~~~g~~~~a~~~~~----------------------------l~~~g~~~~~~g~~~~A~~~~~~al~~~~~ 54 (609)
+..++.++.+.|++++|...+. +...|..+...|++++|+..|+++++.+|.
T Consensus 153 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 232 (597)
T 2xpi_A 153 RYLAAFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAK 232 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHhccCCccccccccccccccccccchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCch
Confidence 4567777777777777666554 445577888888888888888888887775
Q ss_pred chhH-------------------------------------------------------------------HHHHHHHHH
Q psy10738 55 DLRT-------------------------------------------------------------------LSAIYSQLG 67 (609)
Q Consensus 55 ~~~~-------------------------------------------------------------------~a~~~~~lg 67 (609)
+... ...++..+|
T Consensus 233 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~ 312 (597)
T 2xpi_A 233 CYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKA 312 (597)
T ss_dssp CHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHH
T ss_pred hhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHH
Confidence 4331 122344455
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q psy10738 68 NAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLG 147 (609)
Q Consensus 68 ~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg 147 (609)
.+|...|++++|+.+|++++.. .+....++..++.++...|++++|+..+++++...+ ....++..+|
T Consensus 313 ~~~~~~g~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~------~~~~~~~~l~ 380 (597)
T 2xpi_A 313 DTLFVRSRFIDVLAITTKILEI------DPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHP------EKAVTWLAVG 380 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH------CTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TSHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHc------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCc------ccHHHHHHHH
Confidence 5555555555555555555544 233334455555555555555555555555543322 3456788899
Q ss_pred HHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy10738 148 NVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERL 227 (609)
Q Consensus 148 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 227 (609)
.+|...|+ +++|+.+|++++++ .+....++..+|.+|...|++++|+.+|++++
T Consensus 381 ~~~~~~g~--------------------~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 434 (597)
T 2xpi_A 381 IYYLCVNK--------------------ISEARRYFSKSSTM------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAA 434 (597)
T ss_dssp HHHHHTTC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHhcc--------------------HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999999 99999999998876 23345688899999999999999999999998
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 228 KIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 307 (609)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 307 (609)
...+... .++..+|.+|...|++++|+.+|++++...+. ...++..+|.+|...|++++|+.+|++++
T Consensus 435 ~~~~~~~------~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 502 (597)
T 2xpi_A 435 RLFQGTH------LPYLFLGMQHMQLGNILLANEYLQSSYALFQY------DPLLLNELGVVAFNKSDMQTAINHFQNAL 502 (597)
T ss_dssp HTTTTCS------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhCccch------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7755433 37889999999999999999999999876543 25678899999999999999999999999
Q ss_pred HHHHHhcchhh-HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q psy10738 308 IIAQQLMDRVG-EGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 308 ~~~~~~~~~~~-~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~ 381 (609)
.+.++.+.... ...++..+|.+|...|++++|+.++++++++. +....++..++.++...|+.++|..
T Consensus 503 ~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~~~g~~~~A~~ 571 (597)
T 2xpi_A 503 LLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS------TNDANVHTAIALVYLHKKIPGLAIT 571 (597)
T ss_dssp HHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------SCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHhCCHHHHHH
Confidence 98876544333 37799999999999999999999999999875 4567899999999999999776644
No 20
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.93 E-value=7.2e-26 Score=233.45 Aligned_cols=302 Identities=16% Similarity=0.089 Sum_probs=240.8
Q ss_pred HHHHhcCChHHHHH-HHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q psy10738 30 ERLCKAGDCRAGVA-FFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGN 108 (609)
Q Consensus 30 ~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~ 108 (609)
..+...|+|++|+. .|++++...|.++......++.+|.++...|++++|+.++++++.. .+....++..+|.
T Consensus 33 ~~~~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~ 106 (368)
T 1fch_A 33 EAHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQ------DPKHMEAWQYLGT 106 (368)
T ss_dssp -------------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHS------CTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Confidence 36778899999999 9999999988776544567889999999999999999999999987 6777889999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHH
Q psy10738 109 TLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLA 188 (609)
Q Consensus 109 ~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 188 (609)
++...|++++|+.++++++.+.+ ....++..+|.+|...|+ +++|+.++++++.
T Consensus 107 ~~~~~g~~~~A~~~~~~al~~~~------~~~~~~~~l~~~~~~~g~--------------------~~~A~~~~~~~~~ 160 (368)
T 1fch_A 107 TQAENEQELLAISALRRCLELKP------DNQTALMALAVSFTNESL--------------------QRQACEILRDWLR 160 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHH
Confidence 99999999999999999998865 456789999999999999 9999999999988
Q ss_pred HHHHhCChH----------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 189 LMKEINDTA----------AQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 189 ~~~~~~~~~----------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 258 (609)
+.+...... .....+..+|.++ ..|++++|+.++++++.+.+... ...++..+|.++...|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~----~~~~~~~l~~~~~~~g~~~~ 235 (368)
T 1fch_A 161 YTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRLDPTSI----DPDVQCGLGVLFNLSGEYDK 235 (368)
T ss_dssp TSTTTGGGCC---------------CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSC----CHHHHHHHHHHHHHTTCHHH
T ss_pred hCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHhCcCcc----cHHHHHHHHHHHHHcCCHHH
Confidence 643321110 0111223567776 89999999999999998866532 23488899999999999999
Q ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHH
Q psy10738 259 ASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEK 338 (609)
Q Consensus 259 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~ 338 (609)
|+.++++++.+.+.. ..++..+|.++...|++++|+.++++++.+.+. ...++..+|.+|...|++++
T Consensus 236 A~~~~~~al~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~------~~~~~~~l~~~~~~~g~~~~ 303 (368)
T 1fch_A 236 AVDCFTAALSVRPND------YLLWNKLGATLANGNQSEEAVAAYRRALELQPG------YIRSRYNLGISCINLGAHRE 303 (368)
T ss_dssp HHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHhCcCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHCCCHHH
Confidence 999999999886543 678999999999999999999999999987543 35689999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCc-----hHHHHHHHHHHHHHHcCCCCCCC
Q psy10738 339 ALYFATKHLEISKQLGDPL-----GQVTAQMNVTDLRKALGMSTNDL 380 (609)
Q Consensus 339 A~~~~~~al~l~~~~~~~~-----~~~~a~~~la~l~~~~g~~~~al 380 (609)
|+.++++++.+.....++. ....++..++.++..+|+.+.+.
T Consensus 304 A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 350 (368)
T 1fch_A 304 AVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYG 350 (368)
T ss_dssp HHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHH
T ss_pred HHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHH
Confidence 9999999999987663332 23789999999999999977653
No 21
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.93 E-value=6.2e-25 Score=226.65 Aligned_cols=280 Identities=18% Similarity=0.152 Sum_probs=230.2
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
++..|..++..|++++|+.+|+++++..|.+. .++..+|.+|...|++++|+.+|++++.+ .+....++.
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~ 137 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPGDA----EAWQFLGITQAENENEQAAIVALQRCLEL------QPNNLKALM 137 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHhc------CCCCHHHHH
Confidence 55679999999999999999999999999874 48999999999999999999999999998 677789999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcH----HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKL----SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAI 180 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~----~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~ 180 (609)
.+|.+|...|++++|+.++++++.+.+...... .....+..+|.++...|+ +++|+
T Consensus 138 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~--------------------~~~A~ 197 (365)
T 4eqf_A 138 ALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSV--------------------LEGVK 197 (365)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHH--------------------HHHHH
T ss_pred HHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhh--------------------HHHHH
Confidence 999999999999999999999999887543322 124556677999999999 99999
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHH
Q psy10738 181 KYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAAS 260 (609)
Q Consensus 181 ~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 260 (609)
.++++++.+.+... ...++.++|.+|...|++++|+.++++++++.+.. ..++.++|.+|...|++++|+
T Consensus 198 ~~~~~al~~~p~~~----~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~ 267 (365)
T 4eqf_A 198 ELYLEAAHQNGDMI----DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED------YSLWNRLGATLANGDRSEEAV 267 (365)
T ss_dssp HHHHHHHHHSCSSC----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhCcCcc----CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHH
Confidence 99999998732211 35688999999999999999999999999886543 338999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcch------hhHHHHHHHHHHHHHHcC
Q psy10738 261 EHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDR------VGEGRACWSLGNAHAARG 334 (609)
Q Consensus 261 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~~~~~~~La~~~~~~g 334 (609)
.+|++++.+.+.. ..++..+|.+|...|++++|+.+|++++.+.+..... .....++..++.++..+|
T Consensus 268 ~~~~~al~~~p~~------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 341 (365)
T 4eqf_A 268 EAYTRALEIQPGF------IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMD 341 (365)
T ss_dssp HHHHHHHHHCTTC------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCc------hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcC
Confidence 9999999986653 7789999999999999999999999999998875442 223568999999999999
Q ss_pred ChHHHHHHHHHHHHHH
Q psy10738 335 NHEKALYFATKHLEIS 350 (609)
Q Consensus 335 ~~~~A~~~~~~al~l~ 350 (609)
+.+.|.....+.+...
T Consensus 342 ~~~~a~~~~~~~l~~~ 357 (365)
T 4eqf_A 342 QPELFQAANLGDLDVL 357 (365)
T ss_dssp CHHHHHHHHTTCCGGG
T ss_pred cHHHHHHHHHhhHHHH
Confidence 9999998887766554
No 22
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.93 E-value=2e-23 Score=216.78 Aligned_cols=329 Identities=11% Similarity=-0.007 Sum_probs=264.1
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCC---cchhHHHHHHHHHHHH--HHHhCCHHHHH---------HHHHHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGT---DDLRTLSAIYSQLGNA--YFYLGDYQKAM---------QYHKQDLTL 89 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~a~~~~~lg~~--~~~~g~~~~A~---------~~~~~al~~ 89 (609)
.++..-..+...+++++|..+++++....+ .+.... +|+.+-.. ....+.+..+. ..++..-..
T Consensus 14 ~~l~~wy~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~--~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 91 (378)
T 3q15_A 14 VKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLL--IYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLETIETP 91 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGBCCCHHHH--HHHHHHHHHHHHHHHTCCC--------CHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhcccHHHH--HHHHHHHHHHHHHHhhcCcccccccccchHHHHHHHhcc
Confidence 344445556889999999999999876432 233322 33333222 22223322222 333332111
Q ss_pred HHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCc
Q psy10738 90 ARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYP 169 (609)
Q Consensus 90 ~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~ 169 (609)
....+.......++..|..+...|++++|+.+|++++.+.+..++....+.+++++|.+|...|+
T Consensus 92 -~~~~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~-------------- 156 (378)
T 3q15_A 92 -QKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQ-------------- 156 (378)
T ss_dssp -GHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTC--------------
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCC--------------
Confidence 11112333455788899999999999999999999999999888888999999999999999999
Q ss_pred hHhHHhHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Q psy10738 170 EEVKVCLQEAIKYYEQNLALMKEIND-TAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGN 248 (609)
Q Consensus 170 ~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 248 (609)
++.|+.++++++.+.+..++ ....+.++.++|.+|...|++++|+.++++++++.+..++....+.++.++|.
T Consensus 157 ------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~ 230 (378)
T 3q15_A 157 ------THVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIAN 230 (378)
T ss_dssp ------HHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ------cHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999998776 66789999999999999999999999999999999999998889999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Q psy10738 249 SHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGN 328 (609)
Q Consensus 249 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~ 328 (609)
+|..+|++++|+.++++++.+....+++.. +.++..+|.+|...|++++|+.++++++.+.+..+++.... .+..++.
T Consensus 231 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~l~~ 308 (378)
T 3q15_A 231 SYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKE-LFLFLQA 308 (378)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHH-HHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHH
Confidence 999999999999999999999988877766 88999999999999999999999999999988877755444 4678889
Q ss_pred HHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q psy10738 329 AHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 329 ~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~ 381 (609)
+|...|+. ..+.+++...++.+..+....+...+|.++...|+...|..
T Consensus 309 ly~~~~~~----~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~ 357 (378)
T 3q15_A 309 VYKETVDE----RKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAA 357 (378)
T ss_dssp HHSSSCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhCCCcH----HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 99988885 45556666666666777788889999999999999887654
No 23
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.93 E-value=2.5e-24 Score=228.45 Aligned_cols=310 Identities=15% Similarity=0.119 Sum_probs=254.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
...+...|..++..|++++|+.+|+++++..|.+ ..++..+|.++...|++++|+.+++++++. .+....
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~ 95 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN----YIAYYRRATVFLAMGKSKAALPDLTKVIQL------KMDFTA 95 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc------CCCcHH
Confidence 3455667999999999999999999999999987 448899999999999999999999999998 677789
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC---CcH------HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHh
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLN---DKL------SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEV 172 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~---d~~------~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~ 172 (609)
++..+|.+|...|++++|+.+|++++.+.+... ... .....+..+|.++...|+
T Consensus 96 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~----------------- 158 (450)
T 2y4t_A 96 ARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGD----------------- 158 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----------------
Confidence 999999999999999999999999987543111 000 011235566888999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10738 173 KVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIF 252 (609)
Q Consensus 173 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 252 (609)
+++|+.++++++.. .+....++..+|.+|...|++++|+.++++++...+.. ..++..+|.+|..
T Consensus 159 ---~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~ 223 (450)
T 2y4t_A 159 ---YTAAIAFLDKILEV------CVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDN------TEAFYKISTLYYQ 223 (450)
T ss_dssp ---HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSC------HHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Confidence 99999999999886 33345789999999999999999999999999875433 2488999999999
Q ss_pred hCCHHHHHHHHHHHHHHHHHcCCcHH------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHH
Q psy10738 253 LGEYQAASEHYKRTLVLAQDLGDRAV------EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSL 326 (609)
Q Consensus 253 ~g~~~~A~~~~~~al~~~~~~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~L 326 (609)
.|++++|+.++++++.+.+....... .......+|.++...|++++|+.+|++++.+.+. +......++..+
T Consensus 224 ~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l 301 (450)
T 2y4t_A 224 LGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERI 301 (450)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHH
Confidence 99999999999999976554211000 0112244599999999999999999999986543 333346689999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q psy10738 327 GNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 327 a~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~ 381 (609)
|.++...|++++|+.++++++.+. +....++..+|.++...|+...|..
T Consensus 302 ~~~~~~~g~~~~A~~~~~~a~~~~------p~~~~~~~~l~~~~~~~~~~~~A~~ 350 (450)
T 2y4t_A 302 CHCFSKDEKPVEAIRVCSEVLQME------PDNVNALKDRAEAYLIEEMYDEAIQ 350 (450)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhC------cccHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999874 4567899999999999999776644
No 24
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.5e-24 Score=238.94 Aligned_cols=307 Identities=17% Similarity=0.134 Sum_probs=261.9
Q ss_pred hhhhHhhhcCCCcchhHHHH-----------HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHh
Q psy10738 5 NISSSDSQSGGADGGNMCLE-----------LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYL 73 (609)
Q Consensus 5 ~Lg~~~~~~g~~~~a~~~~~-----------l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~ 73 (609)
.++..+.+.|++++|..++. +...|..+...|++++|+.+|+++++..|.+.. ++..++.++...
T Consensus 277 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~ 352 (597)
T 2xpi_A 277 LKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLD----VYPLHLASLHES 352 (597)
T ss_dssp TTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCT----THHHHHHHHHHH
T ss_pred HHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHh
Confidence 34666677777777766654 344589999999999999999999999988755 678899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHc
Q psy10738 74 GDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAK 153 (609)
Q Consensus 74 g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~ 153 (609)
|++++|+..+++++.. .+....++..+|.+|...|++++|+.+|++++++.+ ....++..+|.+|...
T Consensus 353 g~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~ 420 (597)
T 2xpi_A 353 GEKNKLYLISNDLVDR------HPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDP------QFGPAWIGFAHSFAIE 420 (597)
T ss_dssp TCHHHHHHHHHHHHHH------CTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh------CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHc
Confidence 9999999999999876 566788999999999999999999999999998654 3456899999999999
Q ss_pred ccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q psy10738 154 GKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREF 233 (609)
Q Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 233 (609)
|+ +++|+.+|++++... +....++..+|.+|...|++++|+.+|+++++..+..
T Consensus 421 g~--------------------~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 474 (597)
T 2xpi_A 421 GE--------------------HDQAISAYTTAARLF------QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYD 474 (597)
T ss_dssp TC--------------------HHHHHHHHHHHHHTT------TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred CC--------------------HHHHHHHHHHHHHhC------ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 99 999999999998763 2335688999999999999999999999998764432
Q ss_pred CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 234 GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAV-EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 234 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
..++..+|.+|...|++++|+.+|+++++..+..+.... ...++..+|.+|...|++++|+.++++++.+.+.
T Consensus 475 ------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 548 (597)
T 2xpi_A 475 ------PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTN 548 (597)
T ss_dssp ------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSC
T ss_pred ------hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 247899999999999999999999999999887543333 3778999999999999999999999999987532
Q ss_pred hcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q psy10738 313 LMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRK 371 (609)
Q Consensus 313 ~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~ 371 (609)
...++..+|.+|...|++++|..++++++++. +....++..++.+|.
T Consensus 549 ------~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~------p~~~~~~~~l~~~~~ 595 (597)
T 2xpi_A 549 ------DANVHTAIALVYLHKKIPGLAITHLHESLAIS------PNEIMASDLLKRALE 595 (597)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHTTC
T ss_pred ------ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC------CCChHHHHHHHHHHh
Confidence 34689999999999999999999999999975 556778888887763
No 25
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.4e-25 Score=237.31 Aligned_cols=325 Identities=13% Similarity=0.048 Sum_probs=228.0
Q ss_pred chhhhhhHhhhcCCCcchhHHHHHHHH-----------HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHH
Q psy10738 2 SVGNISSSDSQSGGADGGNMCLELALE-----------GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAY 70 (609)
Q Consensus 2 ~l~~Lg~~~~~~g~~~~a~~~~~l~~~-----------g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~ 70 (609)
++..+|.++...|++++|+.++..++. |.++...|++++|+..|+++++.+|++. .++..+|.++
T Consensus 8 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~l~~~~ 83 (514)
T 2gw1_A 8 ALKDKGNQFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYS----KVLLRRASAN 83 (514)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHH----HHHHHHHHHH
Confidence 356677777888888877777765443 7777888888888888888888777764 3677777777
Q ss_pred HHhCCHHHHHHHHHHHHHHHH-----------------------------------------------------------
Q psy10738 71 FYLGDYQKAMQYHKQDLTLAR----------------------------------------------------------- 91 (609)
Q Consensus 71 ~~~g~~~~A~~~~~~al~~~~----------------------------------------------------------- 91 (609)
...|++++|+..|++++...+
T Consensus 84 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (514)
T 2gw1_A 84 EGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTS 163 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHH
T ss_pred HHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHH
Confidence 777777777777776643321
Q ss_pred ---------------------------------------------------------Hc-----CC---hhhHHHHHHHH
Q psy10738 92 ---------------------------------------------------------NM-----ED---KLGEAKSSGNL 106 (609)
Q Consensus 92 ---------------------------------------------------------~~-----~d---~~~~~~a~~~l 106 (609)
.. .+ .+....++..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (514)
T 2gw1_A 164 MASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHT 243 (514)
T ss_dssp HHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHH
Confidence 00 00 13334455555
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHH
Q psy10738 107 GNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQN 186 (609)
Q Consensus 107 g~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 186 (609)
|.++...|++++|+.++++++...+ . ..++..+|.++...|+ +++|+.+++++
T Consensus 244 ~~~~~~~~~~~~A~~~~~~~l~~~~------~-~~~~~~l~~~~~~~~~--------------------~~~A~~~~~~~ 296 (514)
T 2gw1_A 244 GIFKFLKNDPLGAHEDIKKAIELFP------R-VNSYIYMALIMADRND--------------------STEYYNYFDKA 296 (514)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHCC------C-HHHHHHHHHHHHTSSC--------------------CTTGGGHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCc------c-HHHHHHHHHHHHHCCC--------------------HHHHHHHHHHH
Confidence 5555555555555555555554432 1 4455555555555555 55555555555
Q ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy10738 187 LALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRT 266 (609)
Q Consensus 187 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 266 (609)
+.. .+....++..+|.++...|++++|+.++++++.+.+... .++..+|.++...|++++|+.+++++
T Consensus 297 ~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~A~~~~~~~ 364 (514)
T 2gw1_A 297 LKL------DSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENI------FPYIQLACLAYRENKFDDCETLFSEA 364 (514)
T ss_dssp HTT------CTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS------HHHHHHHHHTTTTTCHHHHHHHHHHH
T ss_pred hhc------CcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH------HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 443 122244677788888888888888888888877654433 27788888888888888888888888
Q ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH---cCChHHHHHHH
Q psy10738 267 LVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAA---RGNHEKALYFA 343 (609)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~---~g~~~~A~~~~ 343 (609)
+...+.. ..++..+|.++...|++++|+.++++++.+.+..........++..+|.++.. .|++++|+.++
T Consensus 365 ~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~ 438 (514)
T 2gw1_A 365 KRKFPEA------PEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLL 438 (514)
T ss_dssp HHHSTTC------SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHH
T ss_pred HHHcccC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHH
Confidence 8765542 45788899999999999999999999998877654433335588999999999 99999999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q psy10738 344 TKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTNDLS 381 (609)
Q Consensus 344 ~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~al~ 381 (609)
++++.+. +....++..++.++...|+...|..
T Consensus 439 ~~a~~~~------~~~~~~~~~la~~~~~~g~~~~A~~ 470 (514)
T 2gw1_A 439 EKASKLD------PRSEQAKIGLAQMKLQQEDIDEAIT 470 (514)
T ss_dssp HHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhC------cccHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999874 4456788999999999998777654
No 26
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2e-24 Score=232.80 Aligned_cols=304 Identities=13% Similarity=0.127 Sum_probs=244.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
.-.+...|..++..|+|++|+..|++++...|+ ..++..+|.++...|++++|+.+++++++..+. ...
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~---~~~--- 74 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKED-----PVFYSNLSACYVSVGDLKKVVEMSTKALELKPD---YSK--- 74 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSC---CHH---
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-----HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChH---HHH---
Confidence 345677899999999999999999999999984 458999999999999999999999999876221 111
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHH--------------------------------------------------------
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKR-------------------------------------------------------- 125 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~-------------------------------------------------------- 125 (609)
++..+|.++...|++++|+..|++
T Consensus 75 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (514)
T 2gw1_A 75 VLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDK 154 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC-------------------------
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhh
Confidence 234455555555555555555444
Q ss_pred ------------------------------------------------------------HHHHHHHcC-----C---cH
Q psy10738 126 ------------------------------------------------------------HLEISRQLN-----D---KL 137 (609)
Q Consensus 126 ------------------------------------------------------------al~l~~~~~-----d---~~ 137 (609)
++...+... + .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (514)
T 2gw1_A 155 QENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKE 234 (514)
T ss_dssp --CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHH
T ss_pred ccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccCh
Confidence 444211100 0 13
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFK 217 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 217 (609)
....++..+|.++...|+ +++|+.++++++... +. ..++..+|.++...|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~--------------------~~~A~~~~~~~l~~~------~~-~~~~~~l~~~~~~~~~~~ 287 (514)
T 2gw1_A 235 KLAISLEHTGIFKFLKND--------------------PLGAHEDIKKAIELF------PR-VNSYIYMALIMADRNDST 287 (514)
T ss_dssp HHHHHHHHHHHHHHHSSC--------------------HHHHHHHHHHHHHHC------CC-HHHHHHHHHHHHTSSCCT
T ss_pred HHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHhhC------cc-HHHHHHHHHHHHHCCCHH
Confidence 557788899999999999 999999999998872 22 788999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHH
Q psy10738 218 QAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP 297 (609)
Q Consensus 218 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 297 (609)
+|+.++++++...+.... ++..+|.++...|++++|+.++++++.+.+.. ..++..+|.++...|+++
T Consensus 288 ~A~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~ 355 (514)
T 2gw1_A 288 EYYNYFDKALKLDSNNSS------VYYHRGQMNFILQNYDQAGKDFDKAKELDPEN------IFPYIQLACLAYRENKFD 355 (514)
T ss_dssp TGGGHHHHHHTTCTTCTH------HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSC------SHHHHHHHHHTTTTTCHH
T ss_pred HHHHHHHHHhhcCcCCHH------HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhh------HHHHHHHHHHHHHcCCHH
Confidence 999999999987655443 88999999999999999999999999876542 458889999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH---cC
Q psy10738 298 TAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKA---LG 374 (609)
Q Consensus 298 ~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~---~g 374 (609)
+|+.++++++...+.. ..++..+|.++...|++++|+.++++++.+............++..+|.++.. .|
T Consensus 356 ~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 429 (514)
T 2gw1_A 356 DCETLFSEAKRKFPEA------PEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVE 429 (514)
T ss_dssp HHHHHHHHHHHHSTTC------SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTT
T ss_pred HHHHHHHHHHHHcccC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcC
Confidence 9999999999875442 35889999999999999999999999999887665554456689999999999 88
Q ss_pred CCCCCCC
Q psy10738 375 MSTNDLS 381 (609)
Q Consensus 375 ~~~~al~ 381 (609)
+...|+.
T Consensus 430 ~~~~A~~ 436 (514)
T 2gw1_A 430 NFIEATN 436 (514)
T ss_dssp HHHHHHH
T ss_pred CHHHHHH
Confidence 8766543
No 27
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.92 E-value=1.6e-23 Score=227.32 Aligned_cols=265 Identities=12% Similarity=0.112 Sum_probs=222.6
Q ss_pred hHHHHHHHHHHHHhCCcchh---HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcC
Q psy10738 38 CRAGVAFFQAAIQAGTDDLR---TLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMG 114 (609)
Q Consensus 38 ~~~A~~~~~~al~~~~~~~~---~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g 114 (609)
+++|+..|+++++..|+++. ..+.++..+|.++...|++++|+.++++++.. .+. ..++..+|.++...|
T Consensus 218 ~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~------~~~-~~~~~~l~~~~~~~~ 290 (537)
T 3fp2_A 218 LTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL------HPT-PNSYIFLALTLADKE 290 (537)
T ss_dssp HHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCC-HHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc------CCC-chHHHHHHHHHHHhc
Confidence 33444444444455555433 23567889999999999999999999999998 555 789999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhC
Q psy10738 115 KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEIN 194 (609)
Q Consensus 115 ~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 194 (609)
++++|+.++++++...+ ....++..+|.++...|+ +++|+.++++++.+.
T Consensus 291 ~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~--------------------~~~A~~~~~~a~~~~---- 340 (537)
T 3fp2_A 291 NSQEFFKFFQKAVDLNP------EYPPTYYHRGQMYFILQD--------------------YKNAKEDFQKAQSLN---- 340 (537)
T ss_dssp CCHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHhccCC------CCHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHhC----
Confidence 99999999999998866 446689999999999999 999999999999873
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Q psy10738 195 DTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG 274 (609)
Q Consensus 195 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 274 (609)
+....++..+|.++...|++++|+.++++++...+.... ++..+|.++...|++++|+.+|++++...+...
T Consensus 341 --~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~------~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 341 --PENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPE------VPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp --TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred --CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------HHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 333468999999999999999999999999998665443 888999999999999999999999999998876
Q ss_pred CcHHHHHHHHHHHHHHHHh----------CCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHH
Q psy10738 275 DRAVEAQACYSLGNTYTLL----------RDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFAT 344 (609)
Q Consensus 275 ~~~~~~~~~~~la~~~~~~----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~ 344 (609)
........+..+|.++... |++++|+.++++++.+.+. ...++..+|.+|...|++++|+.+|+
T Consensus 413 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~ 486 (537)
T 3fp2_A 413 KIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPR------SEQAKIGLAQLKLQMEKIDEAIELFE 486 (537)
T ss_dssp SCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 6555555678889999999 9999999999999988654 24689999999999999999999999
Q ss_pred HHHHHHHHc
Q psy10738 345 KHLEISKQL 353 (609)
Q Consensus 345 ~al~l~~~~ 353 (609)
+++++....
T Consensus 487 ~al~~~~~~ 495 (537)
T 3fp2_A 487 DSAILARTM 495 (537)
T ss_dssp HHHHHC--C
T ss_pred HHHHhCCCc
Confidence 999987543
No 28
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.92 E-value=6.9e-24 Score=214.31 Aligned_cols=282 Identities=14% Similarity=0.099 Sum_probs=233.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.++..|..++..|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+....++
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~ 92 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAAPERE----EAWRSLGLTQAENEKDGLAIIALNHARML------DPKDIAVH 92 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CcCCHHHH
Confidence 345679999999999999999999999999874 47889999999999999999999999998 66678899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH-------HHHHHHH-HH-HHHHcccccccCCCCCCCCCchHhHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE-------GRALYNL-GN-VYHAKGKAIGKVGQQDPGEYPEEVKV 174 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~-------~~~~~~l-g~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 174 (609)
..+|.++...|++++|+.++++++...+........ ......+ +. ++...|+
T Consensus 93 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 153 (327)
T 3cv0_A 93 AALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNE------------------- 153 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHH-------------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHccc-------------------
Confidence 999999999999999999999999876543321111 0111122 44 5777888
Q ss_pred hHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC
Q psy10738 175 CLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLG 254 (609)
Q Consensus 175 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 254 (609)
+++|+.++++++... +....++..+|.++...|++++|+.++++++...+.. ..++..+|.++...|
T Consensus 154 -~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~ 220 (327)
T 3cv0_A 154 -YRECRTLLHAALEMN------PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD------AQLWNKLGATLANGN 220 (327)
T ss_dssp -HHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHhhC------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcC
Confidence 999999999998873 3345789999999999999999999999999875432 248899999999999
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhh------HHHHHHHHHH
Q psy10738 255 EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVG------EGRACWSLGN 328 (609)
Q Consensus 255 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~------~~~~~~~La~ 328 (609)
++++|+.++++++...+.. ..++..+|.+|...|++++|+.++++++.+.+....... ...++..+|.
T Consensus 221 ~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (327)
T 3cv0_A 221 RPQEALDAYNRALDINPGY------VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRM 294 (327)
T ss_dssp CHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHH
Confidence 9999999999999876542 668899999999999999999999999998876433222 5678999999
Q ss_pred HHHHcCChHHHHHHHHHHHHHHHHc
Q psy10738 329 AHAARGNHEKALYFATKHLEISKQL 353 (609)
Q Consensus 329 ~~~~~g~~~~A~~~~~~al~l~~~~ 353 (609)
++..+|++++|..+++++++.....
T Consensus 295 ~~~~~g~~~~A~~~~~~~l~~~~~~ 319 (327)
T 3cv0_A 295 LLNVMNRPDLVELTYAQNVEPFAKE 319 (327)
T ss_dssp HHHHTTCHHHHHHHTTCCSHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999887654
No 29
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.92 E-value=5.5e-24 Score=215.33 Aligned_cols=281 Identities=16% Similarity=0.201 Sum_probs=241.7
Q ss_pred hhhhhhHhhhcCCCcchhHHHHHHHH------------HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHH
Q psy10738 3 VGNISSSDSQSGGADGGNMCLELALE------------GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAY 70 (609)
Q Consensus 3 l~~Lg~~~~~~g~~~~a~~~~~l~~~------------g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~ 70 (609)
+..+|..+...|++++|..++..++. +.+++..|++++|+.+++++++..|.++. ++..+|.++
T Consensus 25 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~ 100 (330)
T 3hym_B 25 VVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV----SWFAVGCYY 100 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTH----HHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHH----HHHHHHHHH
Confidence 45678889999999999998877554 78899999999999999999999998754 889999999
Q ss_pred HHhC-CHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q psy10738 71 FYLG-DYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNV 149 (609)
Q Consensus 71 ~~~g-~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~ 149 (609)
...| ++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+. ...++..+|.+
T Consensus 101 ~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~ 168 (330)
T 3hym_B 101 LMVGHKNEHARRYLSKATTL------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG------CHLPMLYIGLE 168 (330)
T ss_dssp HHSCSCHHHHHHHHHHHHTT------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT------CSHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc------cHHHHHHHHHH
Confidence 9999 999999999999987 6667788999999999999999999999999998763 34567789999
Q ss_pred HHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 150 YHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 150 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 229 (609)
|...|+ +++|+.++++++... +....++..+|.++...|++++|+.++++++.+
T Consensus 169 ~~~~~~--------------------~~~A~~~~~~al~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 222 (330)
T 3hym_B 169 YGLTNN--------------------SKLAERFFSQALSIA------PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEK 222 (330)
T ss_dssp HHHTTC--------------------HHHHHHHHHHHHTTC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhh--------------------HHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 999999 999999999998863 334678999999999999999999999999999
Q ss_pred HHHhCCh---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy10738 230 AREFGDK---AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 306 (609)
Q Consensus 230 ~~~~~~~---~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 306 (609)
.+..++. .....++.++|.++...|++++|+.++++++.+.+.. ..++..+|.++...|++++|+.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~a 296 (330)
T 3hym_B 223 IKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQN------ASTYSAIGYIHSLMGNFENAVDYFHTA 296 (330)
T ss_dssp HTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------SHHHHHHHHHHHHHTCHHHHHHHHHTT
T ss_pred hhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccc------hHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 8654432 2224588999999999999999999999999886553 668899999999999999999999999
Q ss_pred HHHHHHhcchhhHHHHHHHHHHHH-HHcCChH
Q psy10738 307 LIIAQQLMDRVGEGRACWSLGNAH-AARGNHE 337 (609)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~La~~~-~~~g~~~ 337 (609)
+.+.+. ...++..++.++ ...|+.+
T Consensus 297 l~~~p~------~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 297 LGLRRD------DTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp TTTCSC------CHHHHHHHHHHHHTTTTC--
T ss_pred HccCCC------chHHHHHHHHHHHHHhCchh
Confidence 877543 345888899888 4566543
No 30
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.91 E-value=5.2e-24 Score=219.70 Aligned_cols=287 Identities=14% Similarity=0.067 Sum_probs=227.1
Q ss_pred HHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHH
Q psy10738 43 AFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVC 122 (609)
Q Consensus 43 ~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~ 122 (609)
..+.+++...+.++......++.+|..+...|++++|+.+|++++.. .+....++..+|.++...|++++|+.+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~ 121 (365)
T 4eqf_A 48 SASEKGYYFHTENPFKDWPGAFEEGLKRLKEGDLPVTILFMEAAILQ------DPGDAEAWQFLGITQAENENEQAAIVA 121 (365)
T ss_dssp -----CCCCCSSCTTTTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhhhcccCCcccchhHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CcCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 44555555555555433456899999999999999999999999998 677789999999999999999999999
Q ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChH----H
Q psy10738 123 CKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTA----A 198 (609)
Q Consensus 123 ~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~----~ 198 (609)
|++++.+.+ ....++..+|.+|...|+ +++|+.++++++.+.+...... .
T Consensus 122 ~~~al~~~p------~~~~~~~~l~~~~~~~g~--------------------~~~A~~~~~~al~~~p~~~~~~~~~~~ 175 (365)
T 4eqf_A 122 LQRCLELQP------NNLKALMALAVSYTNTSH--------------------QQDACEALKNWIKQNPKYKYLVKNKKG 175 (365)
T ss_dssp HHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHCHHHHCC------
T ss_pred HHHHHhcCC------CCHHHHHHHHHHHHcccc--------------------HHHHHHHHHHHHHhCccchHHHhhhcc
Confidence 999999865 446789999999999999 9999999999999865542221 1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHH
Q psy10738 199 QGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAV 278 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 278 (609)
....+..+|.++...|++++|+.++++++.+.+...+ ..++.++|.+|...|++++|+.+|++++.+.+..
T Consensus 176 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~----- 246 (365)
T 4eqf_A 176 SPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMID----PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED----- 246 (365)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHSCSSCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----
T ss_pred chHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----
Confidence 2445567799999999999999999999998654222 2378899999999999999999999999986653
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCC--
Q psy10738 279 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDP-- 356 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~-- 356 (609)
..++..+|.+|...|++++|+.+|++++.+.+. ...++..+|.+|..+|++++|+.++++++++......+
T Consensus 247 -~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 319 (365)
T 4eqf_A 247 -YSLWNRLGATLANGDRSEEAVEAYTRALEIQPG------FIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQ 319 (365)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC-----
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcc
Confidence 678999999999999999999999999988554 35689999999999999999999999999999775542
Q ss_pred ----chHHHHHHHHHHHHHHcCCCC
Q psy10738 357 ----LGQVTAQMNVTDLRKALGMST 377 (609)
Q Consensus 357 ----~~~~~a~~~la~l~~~~g~~~ 377 (609)
.....++..++.++..+|+.+
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 320 VPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp -------CHHHHHHHHHHHHHTCHH
T ss_pred cchhhhHHHHHHHHHHHHHHcCcHH
Confidence 123578899999999999854
No 31
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.91 E-value=1e-21 Score=196.87 Aligned_cols=269 Identities=19% Similarity=0.185 Sum_probs=222.3
Q ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC--ChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-
Q psy10738 57 RTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNME--DKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL- 133 (609)
Q Consensus 57 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~- 133 (609)
.....++..+|.++...|++++|+.++++++.+..... +.+..+.++..+|.+|...|++++|+.++++++.+....
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 103 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTL 103 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 34577999999999999999999999999999988776 678889999999999999999999999999999998877
Q ss_pred -CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHH
Q psy10738 134 -NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI--NDTAAQGRACGNLGNTY 210 (609)
Q Consensus 134 -~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~ 210 (609)
.+......++..+|.+|...|+ +++|+.++++++.+.... ++.+....++.++|.++
T Consensus 104 ~~~~~~~~~~~~~l~~~~~~~g~--------------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (311)
T 3nf1_A 104 GKDHPAVAATLNNLAVLYGKRGK--------------------YKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLC 163 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTC--------------------HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCc--------------------HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 6677889999999999999999 999999999999998877 66788899999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC---------CcHHH
Q psy10738 211 YLLGNFKQAIYYHQERLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG---------DRAVE 279 (609)
Q Consensus 211 ~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---------~~~~~ 279 (609)
...|++++|+.++++++.+.... .+......++..+|.+|...|++++|+.++++++.+.+... .....
T Consensus 164 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 243 (311)
T 3nf1_A 164 QNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMH 243 (311)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHH
Confidence 99999999999999999998876 44566678999999999999999999999999999876531 12223
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISK 351 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~ 351 (609)
...+..++..+...+.+.+|...+.++.... .....++..+|.+|...|++++|+.++++++++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~ 309 (311)
T 3nf1_A 244 AEEREECKGKQKDGTSFGEYGGWYKACKVDS------PTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRK 309 (311)
T ss_dssp HHHHHHC-------CCSCCCC---------C------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCchhhHHHHHHHHHHHhhcCCCC------chHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 4455556666777778888888888776543 33567899999999999999999999999999864
No 32
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=225.18 Aligned_cols=332 Identities=14% Similarity=0.071 Sum_probs=219.8
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhCCc-----chhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC--hhhH
Q psy10738 27 LEGERLCKAGDCRAGVAFFQAAIQAGTD-----DLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMED--KLGE 99 (609)
Q Consensus 27 ~~g~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d--~~~~ 99 (609)
..|.++...|++++|+++|++|+++.+. .....+.+|.++|.+|..+|++++|+.++++++.+.+.... ....
T Consensus 56 ~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~ 135 (472)
T 4g1t_A 56 LLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIES 135 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhh
Confidence 3588999999999999999999886321 11223557888999999999999999999999998887653 3345
Q ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCC---------CCCCCCC
Q psy10738 100 AKSSGNLGNTLKVMG--KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVG---------QQDPGEY 168 (609)
Q Consensus 100 ~~a~~~lg~~~~~~g--~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~---------~~~~~~~ 168 (609)
+.++.++|.++...| +|++|+.+|++++++.| ....++..+|.++...++...... ..+|...
T Consensus 136 ~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p------~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~ 209 (472)
T 4g1t_A 136 PELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP------KNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQ 209 (472)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCH
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcch
Confidence 677888888777654 68999999999998865 334455566666554433100000 0000000
Q ss_pred ch------------HhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCh
Q psy10738 169 PE------------EVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDK 236 (609)
Q Consensus 169 ~~------------~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 236 (609)
.. .....+++|+.++++++.+ .+....++.++|.+|...|++++|+.++++++++.+...
T Consensus 210 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~-- 281 (472)
T 4g1t_A 210 YLKVLLALKLHKMREEGEEEGEGEKLVEEALEK------APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNA-- 281 (472)
T ss_dssp HHHHHHHHHHHHCC------CHHHHHHHHHHHH------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH--
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh------CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChH--
Confidence 00 0011245566666665554 233456788888899999999999999988888765433
Q ss_pred HHHHHHHHHHHHHHHHh-------------------CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHH
Q psy10738 237 AAERRANSNLGNSHIFL-------------------GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP 297 (609)
Q Consensus 237 ~~~~~~~~~la~~~~~~-------------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 297 (609)
.++.++|.+|... +.+++|+.++++++.+.+.. ..++..+|.+|...|+++
T Consensus 282 ----~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~lg~~~~~~~~~~ 351 (472)
T 4g1t_A 282 ----YLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNL------FRVCSILASLHALADQYE 351 (472)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTT------CCCHHHHHHHHHHTTCHH
T ss_pred ----HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCch------hhhhhhHHHHHHHhccHH
Confidence 2667777776543 23456666666666655443 446788999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHHHH------------------cCCCch
Q psy10738 298 TAIDYHLRHLIIAQQLMDRVGEGRACWSLGNA-HAARGNHEKALYFATKHLEISKQ------------------LGDPLG 358 (609)
Q Consensus 298 ~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~-~~~~g~~~~A~~~~~~al~l~~~------------------~~~~~~ 358 (609)
+|+.+|++++.+.+. ......++..+|.+ +...|++++|+.+|++++.+... +...+.
T Consensus 352 ~A~~~~~kaL~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~ 428 (472)
T 4g1t_A 352 EAEYYFQKEFSKELT---PVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGA 428 (472)
T ss_dssp HHHHHHHHHHHSCCC---HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999976432 22233456667765 45789999999999999876321 122244
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCchh
Q psy10738 359 QVTAQMNVTDLRKALGMSTNDLSPDSL 385 (609)
Q Consensus 359 ~~~a~~~la~l~~~~g~~~~al~~~~~ 385 (609)
...++..||.++...|+..+|+.....
T Consensus 429 ~~~~~~~LG~~~~~~g~~~~A~~~y~k 455 (472)
T 4g1t_A 429 DSEALHVLAFLQELNEKMQQADEDSER 455 (472)
T ss_dssp CTTHHHHHHHHHHHHHHCC--------
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 467899999999999999998874443
No 33
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.90 E-value=1e-21 Score=203.21 Aligned_cols=303 Identities=12% Similarity=0.035 Sum_probs=255.0
Q ss_pred chhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Q psy10738 55 DLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLN 134 (609)
Q Consensus 55 ~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 134 (609)
++...+.++..+|.++...|++++|+.++++++.... .++......++..+|.++...|++++|..++++++.+.+..+
T Consensus 9 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 87 (373)
T 1hz4_A 9 EDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELP-PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD 87 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC-TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCC-CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcC
Confidence 3455677889999999999999999999999998753 233344667899999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHH
Q psy10738 135 DKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDT--AAQGRACGNLGNTYYL 212 (609)
Q Consensus 135 d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~~~~~~~lg~~~~~ 212 (609)
+......++.++|.++...|+ +++|+.++++++.+.+..+.. +....++.++|.++..
T Consensus 88 ~~~~~~~~~~~la~~~~~~G~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 147 (373)
T 1hz4_A 88 VWHYALWSLIQQSEILFAQGF--------------------LQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA 147 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH
Confidence 888888899999999999999 999999999999999887765 6678899999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHH
Q psy10738 213 LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDR-AVEAQACYSLGNTYT 291 (609)
Q Consensus 213 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~la~~~~ 291 (609)
.|++++|..++++++.+.+..++.. ...++.++|.++...|++++|..++++++.+.+..+.. .........++.++.
T Consensus 148 ~g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (373)
T 1hz4_A 148 WARLDEAEASARSGIEVLSSYQPQQ-QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQ 226 (373)
T ss_dssp TTCHHHHHHHHHHHHHHTTTSCGGG-GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHhhccCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHH
Confidence 9999999999999999988765543 45688999999999999999999999999987665443 222223335567788
Q ss_pred HhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q psy10738 292 LLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRK 371 (609)
Q Consensus 292 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~ 371 (609)
..|++++|..++.+++...+. ........+..+|.++...|++++|...+++++.+....+.......++..++.++.
T Consensus 227 ~~g~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~ 304 (373)
T 1hz4_A 227 MTGDKAAAANWLRHTAKPEFA--NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYW 304 (373)
T ss_dssp HTTCHHHHHHHHHHSCCCCCT--TCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHhCCCCCCC--cchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH
Confidence 999999999999998764321 111223356789999999999999999999999999988877677789999999999
Q ss_pred HcCCCCCCCC
Q psy10738 372 ALGMSTNDLS 381 (609)
Q Consensus 372 ~~g~~~~al~ 381 (609)
..|+...|..
T Consensus 305 ~~g~~~~A~~ 314 (373)
T 1hz4_A 305 QAGRKSDAQR 314 (373)
T ss_dssp HHTCHHHHHH
T ss_pred HhCCHHHHHH
Confidence 9998776654
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.4e-21 Score=190.18 Aligned_cols=249 Identities=15% Similarity=0.191 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC-ChhhHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNME-DKLGEAK 101 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-d~~~~~~ 101 (609)
..+...|..++..|++++|+.+|+++++.. .+. .++..+|.++...|++++|+.++++++.+.+... +.+..+.
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 80 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDI----TYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISK 80 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCT----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccH----HHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHH
Confidence 345566888888888888888888888887 543 4788888888888888888888888888866543 3444478
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIK 181 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~ 181 (609)
++..+|.++...|++++|+.++++++.+.+. +.++...|+ +++|+.
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--------------~~~~~~~~~--------------------~~~a~~ 126 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRT--------------ADILTKLRN--------------------AEKELK 126 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC--------------HHHHHHHHH--------------------HHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCch--------------hHHHHHHhH--------------------HHHHHH
Confidence 8888888888888888888888888876541 355667777 888888
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHH
Q psy10738 182 YYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASE 261 (609)
Q Consensus 182 ~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 261 (609)
.+++++.. .+....++..+|.++...|++++|+.++++++...+.. ..++..+|.++...|++++|+.
T Consensus 127 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~ 194 (258)
T 3uq3_A 127 KAEAEAYV------NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED------ARGYSNRAAALAKLMSFPEAIA 194 (258)
T ss_dssp HHHHHHHC------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHc------CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhCCHHHHHH
Confidence 88887765 45566778888888888888888888888887765432 2367778888888888888888
Q ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Q psy10738 262 HYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGN 328 (609)
Q Consensus 262 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~ 328 (609)
++++++...+.. ..++..+|.++...|++++|+.++++++.+.++.+..+....++..++.
T Consensus 195 ~~~~al~~~~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 195 DCNKAIEKDPNF------VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYK 255 (258)
T ss_dssp HHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHhCHHH------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHH
Confidence 888877765432 5567777777777777777777777777777665554444445554444
No 35
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.2e-22 Score=193.20 Aligned_cols=252 Identities=15% Similarity=0.188 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-CcH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLN-DKL 137 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~-d~~ 137 (609)
.+..+..+|.+++..|++++|+.++++++.. . ....++..+|.++...|++++|+.++++++.+.+... +..
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~------~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 76 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWEL------H-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYK 76 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------S-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHh------h-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchH
Confidence 4678999999999999999999999999998 3 4567899999999999999999999999999998764 444
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFK 217 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 217 (609)
....++..+|.+|...|+ +++|+.++++++.+... +.++...|+++
T Consensus 77 ~~~~~~~~l~~~~~~~~~--------------------~~~A~~~~~~a~~~~~~--------------~~~~~~~~~~~ 122 (258)
T 3uq3_A 77 VISKSFARIGNAYHKLGD--------------------LKKTIEYYQKSLTEHRT--------------ADILTKLRNAE 122 (258)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHCCC--------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccc--------------------HHHHHHHHHHHHhcCch--------------hHHHHHHhHHH
Confidence 558899999999999999 99999999999986311 45677888999
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHH
Q psy10738 218 QAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYP 297 (609)
Q Consensus 218 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 297 (609)
+|+..+++++...+. ...++..+|.++...|++++|+.++++++...+.. ..++..+|.++...|+++
T Consensus 123 ~a~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~l~~~~~~~~~~~ 190 (258)
T 3uq3_A 123 KELKKAEAEAYVNPE------KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED------ARGYSNRAAALAKLMSFP 190 (258)
T ss_dssp HHHHHHHHHHHCCHH------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHcCcc------hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHhCCHH
Confidence 999999999886444 34589999999999999999999999999876653 678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q psy10738 298 TAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDL 369 (609)
Q Consensus 298 ~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l 369 (609)
+|+.++++++.+.+. ...++..+|.++...|++++|+.++++++++..+.+..+....++..++.+
T Consensus 191 ~A~~~~~~al~~~~~------~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 191 EAIADCNKAIEKDPN------FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCHH------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 999999999987544 356899999999999999999999999999998888777777777777654
No 36
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=217.55 Aligned_cols=301 Identities=15% Similarity=0.104 Sum_probs=219.9
Q ss_pred chhhhhhHhhhcCCCcchhHHHHHHHH--------------------HHHHHh--cCChHHHHHHHHHHHHhCCcchhHH
Q psy10738 2 SVGNISSSDSQSGGADGGNMCLELALE--------------------GERLCK--AGDCRAGVAFFQAAIQAGTDDLRTL 59 (609)
Q Consensus 2 ~l~~Lg~~~~~~g~~~~a~~~~~l~~~--------------------g~~~~~--~g~~~~A~~~~~~al~~~~~~~~~~ 59 (609)
++++||.++...|++++|..++..++. |..+.. .++|++|+.+|+++++++|+++.
T Consensus 96 ~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~-- 173 (472)
T 4g1t_A 96 TWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPE-- 173 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHH--
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHH--
Confidence 467899999999999999988876543 334433 45799999999999999998865
Q ss_pred HHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHH
Q psy10738 60 SAIYSQLGNAYFY---LGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKV----MGKYDEAMVCCKRHLEISRQ 132 (609)
Q Consensus 60 a~~~~~lg~~~~~---~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~~~ 132 (609)
++..+|.++.. .+++++|+..+++++++ .+....++..+|..+.. .|++++|+.++++++.+.+
T Consensus 174 --~~~~~~~~~~~l~~~~~~~~al~~~~~al~l------~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~- 244 (472)
T 4g1t_A 174 --FTSGLAIASYRLDNWPPSQNAIDPLRQAIRL------NPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAP- 244 (472)
T ss_dssp --HHHHHHHHHHHHHHSCCCCCTHHHHHHHHHH------CSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCS-
T ss_pred --HHHHHHHHHHHhcCchHHHHHHHHHHHHhhc------CCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCc-
Confidence 56666766544 57778999999999998 66667777777766654 4678899999999988765
Q ss_pred cCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10738 133 LNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL 212 (609)
Q Consensus 133 ~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~ 212 (609)
....++.++|.+|...|+ +++|+.++++++++ .+..+.++.++|.+|..
T Consensus 245 -----~~~~~~~~lg~~~~~~~~--------------------~~~A~~~~~~al~~------~p~~~~~~~~lg~~y~~ 293 (472)
T 4g1t_A 245 -----GVTDVLRSAAKFYRRKDE--------------------PDKAIELLKKALEY------IPNNAYLHCQIGCCYRA 293 (472)
T ss_dssp -----SCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH------STTCHHHHHHHHHHHHH
T ss_pred -----cHHHHHHHHHHHHHHcCc--------------------hHHHHHHHHHHHHh------CCChHHHHHHHHHHHHH
Confidence 456788999999999999 99999999999987 34456788888888764
Q ss_pred c-------------------CCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Q psy10738 213 L-------------------GNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 213 ~-------------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 273 (609)
. +.+++|+.++++++.+.+.... ++..+|.+|...|++++|+.+|++++.+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~------~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~-- 365 (472)
T 4g1t_A 294 KVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFR------VCSILASLHALADQYEEAEYYFQKEFSKEL-- 365 (472)
T ss_dssp HHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCC------CHHHHHHHHHHTTCHHHHHHHHHHHHHSCC--
T ss_pred HHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhh------hhhhHHHHHHHhccHHHHHHHHHHHHhcCC--
Confidence 3 3466788888888877766666 888999999999999999999999987532
Q ss_pred CCcHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHhcc------------------hhhHHHHHHHHHHHHHHcC
Q psy10738 274 GDRAVEAQACYSLGNT-YTLLRDYPTAIDYHLRHLIIAQQLMD------------------RVGEGRACWSLGNAHAARG 334 (609)
Q Consensus 274 ~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~~~~~~------------------~~~~~~~~~~La~~~~~~g 334 (609)
+......++..+|.+ +...|++++|+.+|.+++.+.+.... .+..+.++..||.+|...|
T Consensus 366 -~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g 444 (472)
T 4g1t_A 366 -TPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNE 444 (472)
T ss_dssp -CHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 222234456667765 45789999999999999876432211 1223468899999999999
Q ss_pred ChHHHHHHHHHHHHHHHHc
Q psy10738 335 NHEKALYFATKHLEISKQL 353 (609)
Q Consensus 335 ~~~~A~~~~~~al~l~~~~ 353 (609)
++++|+.+|++|+++....
T Consensus 445 ~~~~A~~~y~kALe~~~~~ 463 (472)
T 4g1t_A 445 KMQQADEDSERGLESGSLI 463 (472)
T ss_dssp HCC----------------
T ss_pred CHHHHHHHHHHHHhcCCCC
Confidence 9999999999999987544
No 37
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.89 E-value=5.1e-21 Score=191.69 Aligned_cols=279 Identities=21% Similarity=0.222 Sum_probs=222.0
Q ss_pred hhHhhhcCCCcchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCC----cchhHHHHHHHHHHHHHHHhCCHHHHHHH
Q psy10738 7 SSSDSQSGGADGGNMCLELALEGERLCKAGDCRAGVAFFQAAIQAGT----DDLRTLSAIYSQLGNAYFYLGDYQKAMQY 82 (609)
Q Consensus 7 g~~~~~~g~~~~a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~----~~~~~~a~~~~~lg~~~~~~g~~~~A~~~ 82 (609)
.....+.+..+.......+...|..+...|++++|+.+|+++++... .+......++..+|.+|...|++++|+.+
T Consensus 12 ~~~~~q~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 91 (311)
T 3nf1_A 12 ENLYFQGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANL 91 (311)
T ss_dssp GGGSCSSSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccCCCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 34444555555555666777789999999999999999999998632 12344577899999999999999999999
Q ss_pred HHHHHHHHHHc--CChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcccccc
Q psy10738 83 HKQDLTLARNM--EDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYNLGNVYHAKGKAIG 158 (609)
Q Consensus 83 ~~~al~~~~~~--~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~lg~~~~~~g~~~~ 158 (609)
+++++.+.+.. .+.+....++..+|.++...|++++|+.++++++++.... ++......++.++|.++...|+
T Consensus 92 ~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--- 168 (311)
T 3nf1_A 92 LNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGK--- 168 (311)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC---
T ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCC---
Confidence 99999998877 6678889999999999999999999999999999998776 6667888999999999999999
Q ss_pred cCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--
Q psy10738 159 KVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI--NDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFG-- 234 (609)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-- 234 (609)
+++|+.++++++.+.... ++.+....++..+|.+|...|++++|+.++++++.+.+...
T Consensus 169 -----------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 231 (311)
T 3nf1_A 169 -----------------YEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFG 231 (311)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred -----------------HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999998877 55677889999999999999999999999999999876521
Q ss_pred -------ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 235 -------DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 307 (609)
Q Consensus 235 -------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 307 (609)
........+..++..+...+.+.+|...+.++....+ ....++..+|.+|...|++++|+.++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~al 305 (311)
T 3nf1_A 232 SVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSP------TVTTTLKNLGALYRRQGKFEAAETLEEAAM 305 (311)
T ss_dssp ------CCHHHHHHHHHHC-------CCSCCCC---------CH------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCc------hHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1122334455556666667777777777777765443 357899999999999999999999999999
Q ss_pred HHHH
Q psy10738 308 IIAQ 311 (609)
Q Consensus 308 ~~~~ 311 (609)
++.+
T Consensus 306 ~l~~ 309 (311)
T 3nf1_A 306 RSRK 309 (311)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 8764
No 38
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.89 E-value=3.2e-22 Score=196.91 Aligned_cols=243 Identities=15% Similarity=0.154 Sum_probs=210.3
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
++..|..++..|++++|+..|+++++..|.+.. ++..+|.+|...|++++|+.++++++.. ..+....+.++.
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~----~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~ 78 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPY----IYNRRAVCYYELAKYDLAQKDIETYFSK---VNATKAKSADFE 78 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCST----THHHHHHHHHHTTCHHHHHHHHHHHHTT---SCTTTCCHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCchhHHHHHHH
Confidence 456799999999999999999999999998755 7899999999999999999999999883 133445578899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYE 184 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 184 (609)
.+|.++...|++++|+.++++++++.+ ....++..+|.+|...|+ +++|+.+++
T Consensus 79 ~lg~~~~~~~~~~~A~~~~~~a~~~~~------~~~~~~~~l~~~~~~~~~--------------------~~~A~~~~~ 132 (272)
T 3u4t_A 79 YYGKILMKKGQDSLAIQQYQAAVDRDT------TRLDMYGQIGSYFYNKGN--------------------FPLAIQYME 132 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHST------TCTHHHHHHHHHHHHTTC--------------------HHHHHHHHG
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcCc------ccHHHHHHHHHHHHHccC--------------------HHHHHHHHH
Confidence 999999999999999999999999866 345689999999999999 999999999
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC---HHHHHH
Q psy10738 185 QNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGE---YQAASE 261 (609)
Q Consensus 185 ~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~ 261 (609)
+++.+ .+....++.++|...+..+++++|+.++++++++.+.. ..++..+|.++...|+ +++|+.
T Consensus 133 ~al~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~------~~~~~~~~~~~~~~~~~~~~~~A~~ 200 (272)
T 3u4t_A 133 KQIRP------TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNI------YIGYLWRARANAAQDPDTKQGLAKP 200 (272)
T ss_dssp GGCCS------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHHSTTCSSCTTHH
T ss_pred HHhhc------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHcCcchhhHHHHH
Confidence 99887 34446789999955566679999999999999886654 2488899999999999 999999
Q ss_pred HHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 262 HYKRTLVLAQDLGD--RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 262 ~~~~al~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
++++++.+.....+ ......++..+|.+|...|++++|+.++++++.+.+.
T Consensus 201 ~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 253 (272)
T 3u4t_A 201 YYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPT 253 (272)
T ss_dssp HHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 99999999855443 3445678999999999999999999999999998765
No 39
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.88 E-value=2.5e-22 Score=197.66 Aligned_cols=258 Identities=15% Similarity=0.105 Sum_probs=216.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
+++.+|.+++..|++++|+.+++++++. .+....++..+|.++...|++++|+.++++++. .+ .+....+.
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~--~~~~~~~~ 75 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAK------KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KV--NATKAKSA 75 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHT------TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TS--CTTTCCHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cc--CchhHHHH
Confidence 6788999999999999999999999987 556677899999999999999999999999988 22 34445577
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIY 221 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 221 (609)
++..+|.++...|+ +++|+.++++++++. +....++.++|.+|...|++++|+.
T Consensus 76 ~~~~lg~~~~~~~~--------------------~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~ 129 (272)
T 3u4t_A 76 DFEYYGKILMKKGQ--------------------DSLAIQQYQAAVDRD------TTRLDMYGQIGSYFYNKGNFPLAIQ 129 (272)
T ss_dssp HHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHS------TTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHccc--------------------HHHHHHHHHHHHhcC------cccHHHHHHHHHHHHHccCHHHHHH
Confidence 89999999999999 999999999999873 3345689999999999999999999
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCC---HHH
Q psy10738 222 YHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRD---YPT 298 (609)
Q Consensus 222 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~ 298 (609)
++++++++.+.. ..++.++|......+++++|+.++++++++.+.. ..++..+|.++...|+ +++
T Consensus 130 ~~~~al~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~------~~~~~~~~~~~~~~~~~~~~~~ 197 (272)
T 3u4t_A 130 YMEKQIRPTTTD------PKVFYELGQAYYYNKEYVKADSSFVKVLELKPNI------YIGYLWRARANAAQDPDTKQGL 197 (272)
T ss_dssp HHGGGCCSSCCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHHSTTCSSCT
T ss_pred HHHHHhhcCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHcCcchhhHH
Confidence 999998873322 3488899955555679999999999999987653 6788899999999999 999
Q ss_pred HHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q psy10738 299 AIDYHLRHLIIAQQLMD--RVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKA 372 (609)
Q Consensus 299 A~~~~~~al~~~~~~~~--~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~ 372 (609)
|+.++++++.+....++ ......++..+|.+|...|++++|+.++++++++. +....++..++.+...
T Consensus 198 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------p~~~~a~~~l~~~~~~ 267 (272)
T 3u4t_A 198 AKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALD------PTNKKAIDGLKMKLEH 267 (272)
T ss_dssp THHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHC-----
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------ccHHHHHHHhhhhhcc
Confidence 99999999999866555 34456799999999999999999999999999986 4556666666655443
No 40
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.88 E-value=8.7e-21 Score=189.61 Aligned_cols=228 Identities=11% Similarity=0.025 Sum_probs=192.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHH
Q psy10738 63 YSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRA 142 (609)
Q Consensus 63 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~ 142 (609)
|...|.+|...|++++|+.+|.+++.+....++....+.++.++|.+|..+|++++|+.+|++++.+.+..++....+.+
T Consensus 40 ~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~ 119 (292)
T 1qqe_A 40 CVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANF 119 (292)
T ss_dssp HHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33346788899999999999999999999999888889999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHc-ccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHH
Q psy10738 143 LYNLGNVYHAK-GKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIY 221 (609)
Q Consensus 143 ~~~lg~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 221 (609)
+.++|.+|... |+ +++|+.+|++++.+.+..++......++.++|.++..+|++++|+.
T Consensus 120 ~~~lg~~~~~~lg~--------------------~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 179 (292)
T 1qqe_A 120 KFELGEILENDLHD--------------------YAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASD 179 (292)
T ss_dssp HHHHHHHHHHTTCC--------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhhcC--------------------HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999996 99 9999999999999999888777778899999999999999999999
Q ss_pred HHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH--HhCCHHH
Q psy10738 222 YHQERLKIAREFGDK-AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYT--LLRDYPT 298 (609)
Q Consensus 222 ~~~~al~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~--~~g~~~~ 298 (609)
+|++++.+.+..... .....++.++|.++..+|++++|+.+|++++.+.+...... ....+..++..+. ..+++++
T Consensus 180 ~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~-~~~~l~~l~~~~~~~~~~~~~~ 258 (292)
T 1qqe_A 180 IYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSR-ESNFLKSLIDAVNEGDSEQLSE 258 (292)
T ss_dssp HHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----------HHHHHHHHHHHHTTCTTTHHH
T ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcH-HHHHHHHHHHHHHcCCHHHHHH
Confidence 999999987765542 23445789999999999999999999999999888764322 2445666777665 4577999
Q ss_pred HHHHHHHHHHHHH
Q psy10738 299 AIDYHLRHLIIAQ 311 (609)
Q Consensus 299 A~~~~~~al~~~~ 311 (609)
|+..|++++.+.+
T Consensus 259 A~~~~~~~~~l~~ 271 (292)
T 1qqe_A 259 HCKEFDNFMRLDK 271 (292)
T ss_dssp HHHHHTTSSCCCH
T ss_pred HHHHhccCCccHH
Confidence 9998887765543
No 41
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.88 E-value=5.9e-22 Score=200.07 Aligned_cols=276 Identities=12% Similarity=0.033 Sum_probs=223.7
Q ss_pred cchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q psy10738 54 DDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL 133 (609)
Q Consensus 54 ~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 133 (609)
.++......++.+|..+...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+
T Consensus 15 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-- 86 (327)
T 3cv0_A 15 NNPYMYHENPMEEGLSMLKLANLAEAALAFEAVCQA------APEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-- 86 (327)
T ss_dssp SCGGGGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--
T ss_pred ccchhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc--
Confidence 344333457889999999999999999999999987 667788999999999999999999999999998855
Q ss_pred CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHH-------HHHHHHH
Q psy10738 134 NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQ-------GRACGNL 206 (609)
Q Consensus 134 ~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-------~~~~~~l 206 (609)
....++..+|.++...|+ +++|+.++++++...+........ ......+
T Consensus 87 ----~~~~~~~~la~~~~~~~~--------------------~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (327)
T 3cv0_A 87 ----KDIAVHAALAVSHTNEHN--------------------ANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQ 142 (327)
T ss_dssp ----TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHTSTTTTTC-----------------
T ss_pred ----CCHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHH
Confidence 346789999999999999 999999999998764332211100 0011122
Q ss_pred -HH-HHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Q psy10738 207 -GN-TYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACY 284 (609)
Q Consensus 207 -g~-~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 284 (609)
|. ++...|++++|+.++++++...+.. ..++..+|.++...|++++|+.++++++...+.. ..++.
T Consensus 143 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~ 210 (327)
T 3cv0_A 143 SEDFFFAAPNEYRECRTLLHAALEMNPND------AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD------AQLWN 210 (327)
T ss_dssp ---CCTTSHHHHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHH
T ss_pred HHhHHHHHcccHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc------HHHHH
Confidence 44 5888999999999999999875542 3488999999999999999999999999876542 67889
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCch------
Q psy10738 285 SLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLG------ 358 (609)
Q Consensus 285 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~------ 358 (609)
.+|.++...|++++|+.++++++...+. ...++..+|.+|...|++++|+.++++++.+.........
T Consensus 211 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 284 (327)
T 3cv0_A 211 KLGATLANGNRPQEALDAYNRALDINPG------YVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREA 284 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhc
Confidence 9999999999999999999999987543 3458899999999999999999999999998865433332
Q ss_pred HHHHHHHHHHHHHHcCCCCCC
Q psy10738 359 QVTAQMNVTDLRKALGMSTND 379 (609)
Q Consensus 359 ~~~a~~~la~l~~~~g~~~~a 379 (609)
...++..++.++..+|+.+.|
T Consensus 285 ~~~~~~~l~~~~~~~g~~~~A 305 (327)
T 3cv0_A 285 TRSMWDFFRMLLNVMNRPDLV 305 (327)
T ss_dssp HHHHHHHHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHH
Confidence 678999999999999987654
No 42
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.88 E-value=3.1e-20 Score=187.06 Aligned_cols=217 Identities=14% Similarity=0.109 Sum_probs=130.7
Q ss_pred hcCChHHHHHHHHHHHHhCCc-------chhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHH
Q psy10738 34 KAGDCRAGVAFFQAAIQAGTD-------DLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNL 106 (609)
Q Consensus 34 ~~g~~~~A~~~~~~al~~~~~-------~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~l 106 (609)
..|++++|..+++++.+..+. +.......|...|.+|...|++++|+.+|.+++.+....++....+.++.++
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~l 82 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQA 82 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356778888888888765332 2233333444455566666666666666666666666655555556666666
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHH
Q psy10738 107 GNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQN 186 (609)
Q Consensus 107 g~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 186 (609)
|.+|..+|++++|+.+|++++++.+..++....+.++.++|.+|.. |+ +++|+.+|+++
T Consensus 83 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~--------------------~~~A~~~~~~A 141 (307)
T 2ifu_A 83 GMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LD--------------------LSKAVHLYQQA 141 (307)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TC--------------------HHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CC--------------------HHHHHHHHHHH
Confidence 6666666666666666666666666555555555666666666655 66 66666666666
Q ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy10738 187 LALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRT 266 (609)
Q Consensus 187 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 266 (609)
+.+.+..++......++.++|.+|..+|++++|+.+|++++.+.+..+.......++.++|.++..+|++++|+.+|+++
T Consensus 142 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~a 221 (307)
T 2ifu_A 142 AAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRES 221 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 66665555555555566666666666666666666666666666655554444445556666666666666666666666
Q ss_pred HHHHHH
Q psy10738 267 LVLAQD 272 (609)
Q Consensus 267 l~~~~~ 272 (609)
+ +.+.
T Consensus 222 l-~~p~ 226 (307)
T 2ifu_A 222 Y-SIPG 226 (307)
T ss_dssp T-TSTT
T ss_pred h-CCCC
Confidence 5 4443
No 43
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.88 E-value=7.7e-21 Score=190.02 Aligned_cols=275 Identities=11% Similarity=0.030 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCH
Q psy10738 40 AGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYL---GDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKY 116 (609)
Q Consensus 40 ~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~---g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~ 116 (609)
+|.+++.+|-+.-+.... .+ .++.. +++++|+.+|.++ |.+|...|++
T Consensus 3 ~a~~~~~~a~k~~~~~~~----~~-----~~~~~~~~~~~~~A~~~~~~a--------------------~~~~~~~g~~ 53 (292)
T 1qqe_A 3 DPVELLKRAEKKGVPSSG----FM-----KLFSGSDSYKFEEAADLCVQA--------------------ATIYRLRKEL 53 (292)
T ss_dssp CHHHHHHHHHHHSSCCCT----HH-----HHHSCCSHHHHHHHHHHHHHH--------------------HHHHHHTTCT
T ss_pred cHHHHHHHHHHHhCcCCC----cc-----hhcCCCCCccHHHHHHHHHHH--------------------HHHHHHcCCH
Confidence 577888888887664321 11 12222 2488888888876 5567889999
Q ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCCh
Q psy10738 117 DEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDT 196 (609)
Q Consensus 117 ~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 196 (609)
++|+.+|.+++++.+..+++...+.++.++|.+|...|+ +++|+.+|++++.+....++.
T Consensus 54 ~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~--------------------~~~A~~~~~~Al~l~~~~g~~ 113 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGN--------------------SVNAVDSLENAIQIFTHRGQF 113 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHcCCH
Confidence 999999999999999999988889999999999999999 999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Q psy10738 197 AAQGRACGNLGNTYYLL-GNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD 275 (609)
Q Consensus 197 ~~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 275 (609)
...+.++.++|.+|... |++++|+.+|++++++.+..++......++.++|.++..+|++++|+.+|++++.+.+....
T Consensus 114 ~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 88899999999999996 99999999999999999988877777789999999999999999999999999998776544
Q ss_pred c-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH--HcCChHHHHHHHHHHHHHHHH
Q psy10738 276 R-AVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHA--ARGNHEKALYFATKHLEISKQ 352 (609)
Q Consensus 276 ~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~--~~g~~~~A~~~~~~al~l~~~ 352 (609)
. .....++..+|.++..+|++++|+.+|++++.+.+..... .....+..++..+. ..+++++|+..|.+++.+.
T Consensus 194 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~-~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~-- 270 (292)
T 1qqe_A 194 SQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS-RESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLD-- 270 (292)
T ss_dssp TGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCC--
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc-HHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccH--
Confidence 2 3456688999999999999999999999999988876542 23445666777665 4567888888776665432
Q ss_pred cCCCchHHHHHHHHHHHH
Q psy10738 353 LGDPLGQVTAQMNVTDLR 370 (609)
Q Consensus 353 ~~~~~~~~~a~~~la~l~ 370 (609)
+.....+..+-...
T Consensus 271 ----~~~~~~~~~~k~~~ 284 (292)
T 1qqe_A 271 ----KWKITILNKIKESI 284 (292)
T ss_dssp ----HHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHh
Confidence 34444444444433
No 44
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.88 E-value=2.4e-20 Score=187.79 Aligned_cols=246 Identities=11% Similarity=0.057 Sum_probs=205.8
Q ss_pred HhCCHHHHHHHHHHHHHHHHH-----cCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q psy10738 72 YLGDYQKAMQYHKQDLTLARN-----MEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNL 146 (609)
Q Consensus 72 ~~g~~~~A~~~~~~al~~~~~-----~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~l 146 (609)
..|++++|.++++++.+..+. .++.......+...|.+|...|++++|+.+|.+++++.+..++....+.++.++
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~l 82 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQA 82 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 357888999999988877552 234455566777788899999999999999999999999998888889999999
Q ss_pred HHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy10738 147 GNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQER 226 (609)
Q Consensus 147 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 226 (609)
|.+|...|+ +++|+.+|++++.+....++....+.++.++|.+|.. |++++|+.+|+++
T Consensus 83 g~~~~~~g~--------------------~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~A 141 (307)
T 2ifu_A 83 GMMLKDLQR--------------------MPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQA 141 (307)
T ss_dssp HHHHHHTTC--------------------GGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHH
T ss_pred HHHHHhCCC--------------------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHH
Confidence 999999999 9999999999999998888888888899999999988 9999999999999
Q ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy10738 227 LKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 306 (609)
Q Consensus 227 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 306 (609)
+.+.+..++......++.++|.+|..+|++++|+.+|++++.+.+..+.......++..+|.++..+|++++|+.+|+++
T Consensus 142 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~a 221 (307)
T 2ifu_A 142 AAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRES 221 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999888877778899999999999999999999999999999888776666778889999999999999999999999
Q ss_pred HHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHH
Q psy10738 307 LIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALY 341 (609)
Q Consensus 307 l~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~ 341 (609)
+ +.+.... ......+..++..+ ..|+.+.+..
T Consensus 222 l-~~p~~~~-~~e~~~l~~l~~~~-~~~d~~~~~~ 253 (307)
T 2ifu_A 222 Y-SIPGFSG-SEDCAALEDLLQAY-DEQDEEQLLR 253 (307)
T ss_dssp T-TSTTSTT-SHHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred h-CCCCCCC-CHHHHHHHHHHHHH-HhcCHHHHHH
Confidence 8 7655433 23444566666655 5677654444
No 45
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.87 E-value=2.6e-20 Score=183.46 Aligned_cols=259 Identities=19% Similarity=0.126 Sum_probs=209.3
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHcC--ChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHH
Q psy10738 70 YFYLGDYQKAMQYHKQDLTLARNME--DKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYN 145 (609)
Q Consensus 70 ~~~~g~~~~A~~~~~~al~~~~~~~--d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~ 145 (609)
....|++++|+.++++++++..+.. +.+..+.++..+|.++...|++++|+.++++++.+.... ++....+.++.+
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 3457899999999999999988763 567889999999999999999999999999999999877 677788999999
Q ss_pred HHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q psy10738 146 LGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI--NDTAAQGRACGNLGNTYYLLGNFKQAIYYH 223 (609)
Q Consensus 146 lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 223 (609)
+|.+|...|+ +++|+.++++++.+.+.. .+.+....++.++|.+|...|++++|+.++
T Consensus 91 l~~~~~~~g~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 150 (283)
T 3edt_B 91 LAVLYGKRGK--------------------YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYY 150 (283)
T ss_dssp HHHHHHTTTC--------------------HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHhcc--------------------HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999 999999999999998876 345788899999999999999999999999
Q ss_pred HHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC---CcHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 224 QERLKIAREF--GDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG---DRAVEAQACYSLGNTYTLLRDYPT 298 (609)
Q Consensus 224 ~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~ 298 (609)
++++.+.... .+......++.++|.+|...|++++|+.++++++.+.+... ........+..++..+...+.+..
T Consensus 151 ~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T 3edt_B 151 RRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRD 230 (283)
T ss_dssp HHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhH
Confidence 9999997765 33556678999999999999999999999999999877631 112223455666666666655555
Q ss_pred HHHHHHHHHHHHHHhc-chhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q psy10738 299 AIDYHLRHLIIAQQLM-DRVGEGRACWSLGNAHAARGNHEKALYFATKHLEI 349 (609)
Q Consensus 299 A~~~~~~al~~~~~~~-~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l 349 (609)
+.. +..+........ +......++..+|.+|...|++++|..++++++++
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 231 SAP-YGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp -------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHH-HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 444 444444444433 34667789999999999999999999999999875
No 46
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.86 E-value=2.9e-21 Score=199.66 Aligned_cols=248 Identities=10% Similarity=0.003 Sum_probs=209.1
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGD-YQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~-~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
.+...|.++...|++++|+..|++++.++|++. .+|+.+|.++..+|+ +++|+.++++++.+ .+....+
T Consensus 99 a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~----~a~~~~g~~l~~~g~d~~eAl~~~~~al~l------~P~~~~a 168 (382)
T 2h6f_A 99 VYDYFRAVLQRDERSERAFKLTRDAIELNAANY----TVWHFRRVLLKSLQKDLHEEMNYITAIIEE------QPKNYQV 168 (382)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCCHHHHHHHHHHHHHH------CTTCHHH
T ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHhCccCH----HHHHHHHHHHHHcccCHHHHHHHHHHHHHH------CCCCHHH
Confidence 345568999999999999999999999999985 489999999999997 99999999999999 8889999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHH
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKY 182 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 182 (609)
|+++|.++..+|++++|+.+|++++++.+ ....+++++|.++...|+ +++|+.+
T Consensus 169 ~~~~g~~~~~~g~~~eAl~~~~kal~ldP------~~~~a~~~lg~~~~~~g~--------------------~~eAl~~ 222 (382)
T 2h6f_A 169 WHHRRVLVEWLRDPSQELEFIADILNQDA------KNYHAWQHRQWVIQEFKL--------------------WDNELQY 222 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTC--------------------CTTHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCc------cCHHHHHHHHHHHHHcCC--------------------hHHHHHH
Confidence 99999999999999999999999999877 567899999999999999 9999999
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHH-cCCHHHH-----HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC--
Q psy10738 183 YEQNLALMKEINDTAAQGRACGNLGNTYYL-LGNFKQA-----IYYHQERLKIAREFGDKAAERRANSNLGNSHIFLG-- 254 (609)
Q Consensus 183 ~~~al~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A-----~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-- 254 (609)
|++++++ .+....+|+++|.++.. .|.+++| +.+|++++.+.+.... +|.++|.++...|
T Consensus 223 ~~~al~l------~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~------a~~~l~~ll~~~g~~ 290 (382)
T 2h6f_A 223 VDQLLKE------DVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNES------AWNYLKGILQDRGLS 290 (382)
T ss_dssp HHHHHHH------CTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHH------HHHHHHHHHTTTCGG
T ss_pred HHHHHHh------CCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHH------HHHHHHHHHHccCcc
Confidence 9999998 55567899999999999 5555788 5899999998765443 8999999999988
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhC--------C-HHHHHHHHHHH-HHHHHHhcchhhHHHHHH
Q psy10738 255 EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR--------D-YPTAIDYHLRH-LIIAQQLMDRVGEGRACW 324 (609)
Q Consensus 255 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g--------~-~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~ 324 (609)
++++|++.+.++ +..+ ....++..+|.+|..+| + +++|+.+|+++ +++.+. ....|.
T Consensus 291 ~~~~a~~~~~~~-~~~p------~~~~al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~DP~------r~~~w~ 357 (382)
T 2h6f_A 291 KYPNLLNQLLDL-QPSH------SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTI------RKEYWR 357 (382)
T ss_dssp GCHHHHHHHHHH-TTTC------CCHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTTCGG------GHHHHH
T ss_pred chHHHHHHHHHh-ccCC------CCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhCch------hHHHHH
Confidence 689999888765 2221 13678889999999875 2 58898888887 655433 344666
Q ss_pred HHHHHHHH
Q psy10738 325 SLGNAHAA 332 (609)
Q Consensus 325 ~La~~~~~ 332 (609)
.++..+..
T Consensus 358 ~~~~~l~~ 365 (382)
T 2h6f_A 358 YIGRSLQS 365 (382)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665554
No 47
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.85 E-value=5e-21 Score=197.94 Aligned_cols=252 Identities=11% Similarity=-0.034 Sum_probs=215.4
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHcCCcH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGK-YDEAMVCCKRHLEISRQLNDKL 137 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~-~~~A~~~~~~al~l~~~~~d~~ 137 (609)
...++..+|.++...|++++|+..+++++.+ .+....+|+++|.++..+|+ +++|+.+|++++.+.+
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P------ 163 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIEL------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP------ 163 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT------
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHh------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCC------
Confidence 4678999999999999999999999999999 88899999999999999997 9999999999999877
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFK 217 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 217 (609)
....+|+++|.++...|+ +++|+.+|++++.+ .+....+|.++|.++..+|+++
T Consensus 164 ~~~~a~~~~g~~~~~~g~--------------------~~eAl~~~~kal~l------dP~~~~a~~~lg~~~~~~g~~~ 217 (382)
T 2h6f_A 164 KNYQVWHHRRVLVEWLRD--------------------PSQELEFIADILNQ------DAKNYHAWQHRQWVIQEFKLWD 217 (382)
T ss_dssp TCHHHHHHHHHHHHHHTC--------------------CTTHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCCT
T ss_pred CCHHHHHHHHHHHHHccC--------------------HHHHHHHHHHHHHh------CccCHHHHHHHHHHHHHcCChH
Confidence 567799999999999999 99999999999998 5566789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH-hCCHHHH-----HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Q psy10738 218 QAIYYHQERLKIAREFGDKAAERRANSNLGNSHIF-LGEYQAA-----SEHYKRTLVLAQDLGDRAVEAQACYSLGNTYT 291 (609)
Q Consensus 218 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A-----~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 291 (609)
+|+.++++++++.+.... +|+++|.++.. .|.+++| +.+|++++.+.+.. ..++..+|.++.
T Consensus 218 eAl~~~~~al~l~P~~~~------a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~------~~a~~~l~~ll~ 285 (382)
T 2h6f_A 218 NELQYVDQLLKEDVRNNS------VWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHN------ESAWNYLKGILQ 285 (382)
T ss_dssp THHHHHHHHHHHCTTCHH------HHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHH
Confidence 999999999998766544 99999999999 5555777 58999999988764 678999999999
Q ss_pred HhC--CHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcC--------C-hHHHHHHHHHH-HHHHHHcCCCchH
Q psy10738 292 LLR--DYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARG--------N-HEKALYFATKH-LEISKQLGDPLGQ 359 (609)
Q Consensus 292 ~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g--------~-~~~A~~~~~~a-l~l~~~~~~~~~~ 359 (609)
..| ++++|++.+.++ .. ......++..+|.+|..+| + +++|+.+|+++ +++. +..
T Consensus 286 ~~g~~~~~~a~~~~~~~-~~------~p~~~~al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~D------P~r 352 (382)
T 2h6f_A 286 DRGLSKYPNLLNQLLDL-QP------SHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKD------TIR 352 (382)
T ss_dssp TTCGGGCHHHHHHHHHH-TT------TCCCHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTTC------GGG
T ss_pred ccCccchHHHHHHHHHh-cc------CCCCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhC------chh
Confidence 988 699999888764 21 2224568889999999985 2 47888888876 5543 666
Q ss_pred HHHHHHHHHHHHHc
Q psy10738 360 VTAQMNVTDLRKAL 373 (609)
Q Consensus 360 ~~a~~~la~l~~~~ 373 (609)
...+..++..+...
T Consensus 353 ~~~w~~~~~~l~~~ 366 (382)
T 2h6f_A 353 KEYWRYIGRSLQSK 366 (382)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888777654
No 48
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.85 E-value=1.1e-20 Score=180.14 Aligned_cols=195 Identities=17% Similarity=0.150 Sum_probs=158.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|..+...|++++|+..|+++++.+|+++. ++..+|.++...|++++|+..+++++++ .|....++
T Consensus 7 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~ 76 (217)
T 2pl2_A 7 NPLRLGVQLYALGRYDAALTLFERALKENPQDPE----ALYWLARTQLKLGLVNPALENGKTLVAR------TPRYLGGY 76 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHH
Confidence 3456699999999999999999999999998854 8899999999999999999999999999 78888999
Q ss_pred HHHHHHHHHc-----------CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHh
Q psy10738 104 GNLGNTLKVM-----------GKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEV 172 (609)
Q Consensus 104 ~~lg~~~~~~-----------g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~ 172 (609)
.++|.++... |++++|+..+++++++.+ ....++.++|.++...|+
T Consensus 77 ~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P------~~~~~~~~lg~~~~~~g~----------------- 133 (217)
T 2pl2_A 77 MVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNP------RYAPLHLQRGLVYALLGE----------------- 133 (217)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCc------ccHHHHHHHHHHHHHcCC-----------------
Confidence 9999999999 999999999999998866 456788999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10738 173 KVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIF 252 (609)
Q Consensus 173 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 252 (609)
+++|+..|++++++. ....++.++|.++...|++++|+..|++++++.+... .++.++|.++..
T Consensus 134 ---~~~A~~~~~~al~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~------~~~~~la~~~~~ 197 (217)
T 2pl2_A 134 ---RDKAEASLKQALALE-------DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDL------DLRVRYASALLL 197 (217)
T ss_dssp ---HHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH------HHHHHHHHHHTC
T ss_pred ---hHHHHHHHHHHHhcc-------cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHH
Confidence 999999999999874 2356788999999999999999999999998765443 378889999999
Q ss_pred hCCHHHHHHHHHHHH
Q psy10738 253 LGEYQAASEHYKRTL 267 (609)
Q Consensus 253 ~g~~~~A~~~~~~al 267 (609)
.|++++|+.+++++.
T Consensus 198 ~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 198 KGKAEEAARAAALEH 212 (217)
T ss_dssp ---------------
T ss_pred ccCHHHHHHHHHHHh
Confidence 999999998888754
No 49
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.85 E-value=8.4e-21 Score=180.93 Aligned_cols=196 Identities=17% Similarity=0.144 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEG 140 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~ 140 (609)
.+++.+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++++.+ ...
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P------~~~ 73 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKE------NPQDPEALYWLARTQLKLGLVNPALENGKTLVARTP------RYL 73 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTT------SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CcH
Confidence 47899999999999999999999999998 888899999999999999999999999999999876 556
Q ss_pred HHHHHHHHHHHHc-----------ccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q psy10738 141 RALYNLGNVYHAK-----------GKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNT 209 (609)
Q Consensus 141 ~~~~~lg~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 209 (609)
.++.++|.++... |+ +++|+..+++++++ .+....++.++|.+
T Consensus 74 ~a~~~lg~~~~~~~~~~~~~~~~~g~--------------------~~~A~~~~~~al~~------~P~~~~~~~~lg~~ 127 (217)
T 2pl2_A 74 GGYMVLSEAYVALYRQAEDRERGKGY--------------------LEQALSVLKDAERV------NPRYAPLHLQRGLV 127 (217)
T ss_dssp HHHHHHHHHHHHHHHTCSSHHHHHHH--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhhhcccccC--------------------HHHHHHHHHHHHHh------CcccHHHHHHHHHH
Confidence 7899999999999 88 99999999999988 44556788999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q psy10738 210 YYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNT 289 (609)
Q Consensus 210 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 289 (609)
+...|++++|+.+|++++++. . + ..++.++|.++...|++++|+..|++++.+.+.. ..++..+|.+
T Consensus 128 ~~~~g~~~~A~~~~~~al~~~-~--~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~------~~~~~~la~~ 194 (217)
T 2pl2_A 128 YALLGERDKAEASLKQALALE-D--T----PEIRSALAELYLSMGRLDEALAQYAKALEQAPKD------LDLRVRYASA 194 (217)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC-C--C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcc-c--c----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------hHHHHHHHHH
Confidence 999999999999999999986 2 2 2378899999999999999999999999887653 6788899999
Q ss_pred HHHhCCHHHHHHHHHHHH
Q psy10738 290 YTLLRDYPTAIDYHLRHL 307 (609)
Q Consensus 290 ~~~~g~~~~A~~~~~~al 307 (609)
+...|++++|+.+++++-
T Consensus 195 ~~~~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 195 LLLKGKAEEAARAAALEH 212 (217)
T ss_dssp HTC---------------
T ss_pred HHHccCHHHHHHHHHHHh
Confidence 999999999999888754
No 50
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.85 E-value=3.4e-19 Score=175.45 Aligned_cols=256 Identities=19% Similarity=0.189 Sum_probs=202.3
Q ss_pred HhcCChHHHHHHHHHHHHhC----CcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CChhhHHHHHHHH
Q psy10738 33 CKAGDCRAGVAFFQAAIQAG----TDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNM--EDKLGEAKSSGNL 106 (609)
Q Consensus 33 ~~~g~~~~A~~~~~~al~~~----~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~d~~~~~~a~~~l 106 (609)
...|++++|+.+|+++++.. ..+....+.++..+|.+|...|++++|+.++++++.+.... ++.+..+.++..+
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 45678888888888888753 12334467899999999999999999999999999998887 7778889999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHH
Q psy10738 107 GNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYE 184 (609)
Q Consensus 107 g~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 184 (609)
|.+|...|++++|+.++.+++.+.... .+.+....++.++|.+|...|+ +++|+.+++
T Consensus 92 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------------~~~A~~~~~ 151 (283)
T 3edt_B 92 AVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGK--------------------AEEVEYYYR 151 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC--------------------HHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCC--------------------HHHHHHHHH
Confidence 999999999999999999999998776 3346788999999999999999 999999999
Q ss_pred HHHHHHHHh--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 185 QNLALMKEI--NDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGD---KAAERRANSNLGNSHIFLGEYQAA 259 (609)
Q Consensus 185 ~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A 259 (609)
+++.+.... .+.+....++.++|.+|...|++++|+.++++++.+.+.... .......+..++..+...+.+..+
T Consensus 152 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T 3edt_B 152 RALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDS 231 (283)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC-
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHH
Confidence 999998776 446778899999999999999999999999999998776321 111123556666666655554444
Q ss_pred HHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 260 SEHYKRTLVLAQDLG-DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 309 (609)
Q Consensus 260 ~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 309 (609)
.. +..+........ +......++..+|.+|...|++++|+.++++++++
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 232 AP-YGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp ------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HH-HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 33 444444444433 45667889999999999999999999999999864
No 51
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.84 E-value=6.1e-19 Score=189.66 Aligned_cols=302 Identities=17% Similarity=0.161 Sum_probs=187.9
Q ss_pred hhhhhhHhhh----cCCCcchhHHHHHHH----------HHHHHHh----cCChHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy10738 3 VGNISSSDSQ----SGGADGGNMCLELAL----------EGERLCK----AGDCRAGVAFFQAAIQAGTDDLRTLSAIYS 64 (609)
Q Consensus 3 l~~Lg~~~~~----~g~~~~a~~~~~l~~----------~g~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~a~~~~ 64 (609)
+..||.++.. .+++++|..++..+. .|..+.. .+++++|+.+|+++.+.+ + ..+++
T Consensus 42 ~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~----~~a~~ 115 (490)
T 2xm6_A 42 QLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG--L----PQAQQ 115 (490)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C----HHHHH
T ss_pred HHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--C----HHHHH
Confidence 3456666665 566666666555433 2666666 667777777777766543 2 23556
Q ss_pred HHHHHHHH----hCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCc
Q psy10738 65 QLGNAYFY----LGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKV----MGKYDEAMVCCKRHLEISRQLNDK 136 (609)
Q Consensus 65 ~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~~~~~d~ 136 (609)
.+|.+|.. .+++++|+.+|+++.+. ....+++.+|.+|.. .+++++|+.+|+++++. +
T Consensus 116 ~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~----~-- 181 (490)
T 2xm6_A 116 NLGVMYHEGNGVKVDKAESVKWFRLAAEQ--------GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ----G-- 181 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----T--
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----C--
Confidence 66666666 56666666666666543 234555666666665 55666666666665542 1
Q ss_pred HHHHHHHHHHHHHHHH----cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCCh----------------
Q psy10738 137 LSEGRALYNLGNVYHA----KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDT---------------- 196 (609)
Q Consensus 137 ~~~~~~~~~lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---------------- 196 (609)
...+++.+|.+|.. .++ +++|+.+|+++.+. ++.
T Consensus 182 --~~~a~~~Lg~~y~~g~g~~~~--------------------~~~A~~~~~~a~~~----~~~~a~~~lg~~y~~g~g~ 235 (490)
T 2xm6_A 182 --NVWSCNQLGYMYSRGLGVERN--------------------DAISAQWYRKSATS----GDELGQLHLADMYYFGIGV 235 (490)
T ss_dssp --CHHHHHHHHHHHHHTSSSCCC--------------------HHHHHHHHHHHHHT----TCHHHHHHHHHHHHHTSSS
T ss_pred --CHHHHHHHHHHHhcCCCCCcC--------------------HHHHHHHHHHHHHC----CCHHHHHHHHHHHHcCCCC
Confidence 13345555555554 444 44555544444321 110
Q ss_pred ----------------HHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh---
Q psy10738 197 ----------------AAQGRACGNLGNTYYL----LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFL--- 253 (609)
Q Consensus 197 ----------------~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~--- 253 (609)
.....++.++|.+|.. .+++++|+.+|+++.+. ++ ..+++.+|.+|...
T Consensus 236 ~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~----~~----~~a~~~Lg~~y~~~~~g 307 (490)
T 2xm6_A 236 TQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQ----GN----SDGQYYLAHLYDKGAEG 307 (490)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTT----TC----HHHHHHHHHHHHHCBTT
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHcCCCC
Confidence 0112355566666666 66666666666666532 11 23666777777776
Q ss_pred --CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Q psy10738 254 --GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR---DYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGN 328 (609)
Q Consensus 254 --g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~ 328 (609)
+++++|+.+|+++.+. ++ ..+++.+|.+|...| ++++|+.+|+++++. ....+++.||.
T Consensus 308 ~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~ 371 (490)
T 2xm6_A 308 VAKNREQAISWYTKSAEQ----GD----ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--------GEKAAQFNLGN 371 (490)
T ss_dssp BCCCHHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--------TCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhc----CC----HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--------CCHHHHHHHHH
Confidence 7777777777777653 11 457778888887765 778888888887754 13568889999
Q ss_pred HHHH----cCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH----cCCCCCCCCC
Q psy10738 329 AHAA----RGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKA----LGMSTNDLSP 382 (609)
Q Consensus 329 ~~~~----~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~----~g~~~~al~~ 382 (609)
+|.. .+++++|+.+|+++++. ....++.+|+.+|.. .++...|..+
T Consensus 372 ~y~~g~g~~~~~~~A~~~~~~A~~~--------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 425 (490)
T 2xm6_A 372 ALLQGKGVKKDEQQAAIWMRKAAEQ--------GLSAAQVQLGEIYYYGLGVERDYVQAWAW 425 (490)
T ss_dssp HHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHhC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 9998 89999999999998872 246788999999987 5665555443
No 52
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.83 E-value=8.2e-20 Score=179.64 Aligned_cols=255 Identities=15% Similarity=-0.039 Sum_probs=204.1
Q ss_pred HHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q psy10738 32 LCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLK 111 (609)
Q Consensus 32 ~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~ 111 (609)
+...|++++|+..|+++++..+.++...+.++..+|.++...|++++|+.++++++.. .+....++..+|.++.
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~la~~~~ 88 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI------RPDMPEVFNYLGIYLT 88 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc------CCCcHHHHHHHHHHHH
Confidence 3446889999999999999876666667889999999999999999999999999998 6677889999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHH
Q psy10738 112 VMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMK 191 (609)
Q Consensus 112 ~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 191 (609)
..|++++|+.++++++.+.+ ....++..+|.+|...|+ +++|+.++++++.+.+
T Consensus 89 ~~~~~~~A~~~~~~al~~~~------~~~~~~~~la~~~~~~g~--------------------~~~A~~~~~~a~~~~~ 142 (275)
T 1xnf_A 89 QAGNFDAAYEAFDSVLELDP------TYNYAHLNRGIALYYGGR--------------------DKLAQDDLLAFYQDDP 142 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCT------TCTHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHCT
T ss_pred HccCHHHHHHHHHHHHhcCc------cccHHHHHHHHHHHHhcc--------------------HHHHHHHHHHHHHhCC
Confidence 99999999999999999865 335789999999999999 9999999999998632
Q ss_pred HhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q psy10738 192 EINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ 271 (609)
Q Consensus 192 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 271 (609)
. . ......++ ++...|++++|+.++.+++...+... ....++.++...+++++|+..+.+++...+
T Consensus 143 ~---~---~~~~~~~~-~~~~~~~~~~A~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 208 (275)
T 1xnf_A 143 N---D---PFRSLWLY-LAEQKLDEKQAKEVLKQHFEKSDKEQ-------WGWNIVEFYLGNISEQTLMERLKADATDNT 208 (275)
T ss_dssp T---C---HHHHHHHH-HHHHHHCHHHHHHHHHHHHHHSCCCS-------THHHHHHHHTTSSCHHHHHHHHHHHCCSHH
T ss_pred C---C---hHHHHHHH-HHHHhcCHHHHHHHHHHHHhcCCcch-------HHHHHHHHHHHhcCHHHHHHHHHHHhcccc
Confidence 2 1 12222333 34667999999999999988655432 234577788888999999999999887766
Q ss_pred HcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHH
Q psy10738 272 DLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFA 343 (609)
Q Consensus 272 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~ 343 (609)
.. ......++..+|.+|...|++++|+.++++++.+.+.. +...+.++..+|++++|+..+
T Consensus 209 ~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---------~~~~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 209 SL--AEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHN---------FVEHRYALLELSLLGQDQDDL 269 (275)
T ss_dssp HH--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTT---------CHHHHHHHHHHHHHHHC----
T ss_pred cc--cccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchh---------HHHHHHHHHHHHHHHhhHHHH
Confidence 42 12236789999999999999999999999999775421 223466788888999888876
No 53
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.83 E-value=2.3e-18 Score=185.15 Aligned_cols=274 Identities=18% Similarity=0.228 Sum_probs=189.1
Q ss_pred HHHHHHHHHh----cCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHcCCh
Q psy10738 25 LALEGERLCK----AGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY----LGDYQKAMQYHKQDLTLARNMEDK 96 (609)
Q Consensus 25 l~~~g~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~d~ 96 (609)
....|..+.. .+++++|+.+|+++.+.+ + +.+++.+|.+|.. .+++++|+.+|+++.+.
T Consensus 42 ~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~--~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~------- 108 (490)
T 2xm6_A 42 QLELGYRYFQGNETTKDLTQAMDWFRRAAEQG--Y----TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK------- 108 (490)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------
T ss_pred HHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCC--C----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------
Confidence 3445888888 899999999999999863 3 4488999999999 99999999999999764
Q ss_pred hhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----cccccccCCCCCCCCC
Q psy10738 97 LGEAKSSGNLGNTLKV----MGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA----KGKAIGKVGQQDPGEY 168 (609)
Q Consensus 97 ~~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~----~g~~~~~~~~~~~~~~ 168 (609)
....+++.+|.+|.. .+++++|+.+|+++.+. ....+++++|.+|.. .++
T Consensus 109 -~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~d------------- 166 (490)
T 2xm6_A 109 -GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--------GRDSGQQSMGDAYFEGDGVTRD------------- 166 (490)
T ss_dssp -TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCC-------------
T ss_pred -CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCC-------------
Confidence 356788999999999 89999999999998764 236789999999998 788
Q ss_pred chHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Q psy10738 169 PEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL----LGNFKQAIYYHQERLKIAREFGDKAAERRANS 244 (609)
Q Consensus 169 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 244 (609)
+++|+.+|+++.+. ++ ..++.++|.+|.. .+++++|+.+|+++.+. ++ ..+++
T Consensus 167 -------~~~A~~~~~~a~~~----~~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~----~~----~~a~~ 223 (490)
T 2xm6_A 167 -------YVMAREWYSKAAEQ----GN----VWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS----GD----ELGQL 223 (490)
T ss_dssp -------HHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TC----HHHHH
T ss_pred -------HHHHHHHHHHHHHC----CC----HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC----CC----HHHHH
Confidence 99999999999864 22 4678888998888 88899999988888653 11 12455
Q ss_pred HHHHHHHH----hCCHHHHHHHHHHHHHHHHHc----------------CCc------------HHHHHHHHHHHHHHHH
Q psy10738 245 NLGNSHIF----LGEYQAASEHYKRTLVLAQDL----------------GDR------------AVEAQACYSLGNTYTL 292 (609)
Q Consensus 245 ~la~~~~~----~g~~~~A~~~~~~al~~~~~~----------------~~~------------~~~~~~~~~la~~~~~ 292 (609)
.+|.+|.. .+++++|+.+|+++++..... ++. .....+++.+|.+|..
T Consensus 224 ~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~ 303 (490)
T 2xm6_A 224 HLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQYYLAHLYDK 303 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Confidence 55555554 555556655555554321000 000 0012344445555554
Q ss_pred h-----CCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHcCCCchHHHHHH
Q psy10738 293 L-----RDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARG---NHEKALYFATKHLEISKQLGDPLGQVTAQM 364 (609)
Q Consensus 293 ~-----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g---~~~~A~~~~~~al~l~~~~~~~~~~~~a~~ 364 (609)
. +++++|+.+|+++.+. + ...++..+|.+|...| ++++|+.+|+++++. ....++.
T Consensus 304 ~~~g~~~~~~~A~~~~~~a~~~----~----~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--------~~~~a~~ 367 (490)
T 2xm6_A 304 GAEGVAKNREQAISWYTKSAEQ----G----DATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--------GEKAAQF 367 (490)
T ss_dssp CBTTBCCCHHHHHHHHHHHHHT----T----CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--------TCHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHhc----C----CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--------CCHHHHH
Confidence 4 4555555555554432 1 1235556666666544 556666666666542 2355666
Q ss_pred HHHHHHHH
Q psy10738 365 NVTDLRKA 372 (609)
Q Consensus 365 ~la~l~~~ 372 (609)
.|+.+|..
T Consensus 368 ~Lg~~y~~ 375 (490)
T 2xm6_A 368 NLGNALLQ 375 (490)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 77777665
No 54
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.82 E-value=1.8e-18 Score=170.55 Aligned_cols=223 Identities=20% Similarity=0.337 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCC
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKV----MGKYDEAMVCCKRHLEISRQLND 135 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~~~~~d 135 (609)
+.+++.+|.++...|++++|+.+|+++++ +....+++.+|.+|.. .|++++|+.+|+++++..
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--------~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~----- 72 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--------LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN----- 72 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-----
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--------CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-----
Confidence 44889999999999999999999999987 2335789999999999 999999999999998762
Q ss_pred cHHHHHHHHHHHHHHHH----cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy10738 136 KLSEGRALYNLGNVYHA----KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYY 211 (609)
Q Consensus 136 ~~~~~~~~~~lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~ 211 (609)
...+++++|.+|.. .++ +++|+.+|+++++. + ...++.++|.+|.
T Consensus 73 ---~~~a~~~lg~~~~~g~~~~~~--------------------~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~ 121 (273)
T 1ouv_A 73 ---YSNGCHLLGNLYYSGQGVSQN--------------------TNKALQYYSKACDL----K----YAEGCASLGGIYH 121 (273)
T ss_dssp ---CHHHHHHHHHHHHHTSSSCCC--------------------HHHHHHHHHHHHHT----T----CHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhCCCCcccC--------------------HHHHHHHHHHHHHc----C----CccHHHHHHHHHH
Confidence 46789999999999 999 99999999999875 2 3568999999999
Q ss_pred H----cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Q psy10738 212 L----LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQAC 283 (609)
Q Consensus 212 ~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 283 (609)
. .|++++|+.+|+++++.. + ..++.++|.+|.. .+++++|+.+|+++++.. ...++
T Consensus 122 ~~~~~~~~~~~A~~~~~~a~~~~----~----~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~a~ 185 (273)
T 1ouv_A 122 DGKVVTRDFKKAVEYFTKACDLN----D----GDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--------DSPGC 185 (273)
T ss_dssp HCSSSCCCHHHHHHHHHHHHHTT----C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--------CHHHH
T ss_pred cCCCcccCHHHHHHHHHHHHhcC----c----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--------CHHHH
Confidence 9 999999999999998752 2 3478899999999 999999999999998752 25688
Q ss_pred HHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHH
Q psy10738 284 YSLGNTYTL----LRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAA----RGNHEKALYFATKHLEIS 350 (609)
Q Consensus 284 ~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~----~g~~~~A~~~~~~al~l~ 350 (609)
+.+|.+|.. .+++++|+.+++++++.. ...++..+|.+|.. .|++++|+.+|++++++.
T Consensus 186 ~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--------~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 186 FNAGNMYHHGEGATKNFKEALARYSKACELE--------NGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCccHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcC
Confidence 999999999 999999999999998752 15689999999999 999999999999999864
No 55
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.81 E-value=6e-18 Score=166.85 Aligned_cols=223 Identities=20% Similarity=0.318 Sum_probs=194.7
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHcCChhhH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY----LGDYQKAMQYHKQDLTLARNMEDKLGE 99 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~d~~~~ 99 (609)
.+...|..+...|++++|+.+|+++++ +++. .+++.+|.+|.. .+++++|+.+|+++++. . .
T Consensus 8 a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~----~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~------~--~ 73 (273)
T 1ouv_A 8 ELVGLGAKSYKEKDFTQAKKYFEKACD--LKEN----SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL------N--Y 73 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCH----HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT------T--C
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCH----HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC------C--C
Confidence 445679999999999999999999999 4443 478999999999 99999999999999876 2 5
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----cccccccCCCCCCCCCchH
Q psy10738 100 AKSSGNLGNTLKV----MGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA----KGKAIGKVGQQDPGEYPEE 171 (609)
Q Consensus 100 ~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~----~g~~~~~~~~~~~~~~~~~ 171 (609)
..+++.+|.+|.. .+++++|+.+|+++++. ....+++++|.+|.. .++
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--------~~~~a~~~lg~~~~~~~~~~~~---------------- 129 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--------KYAEGCASLGGIYHDGKVVTRD---------------- 129 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHCSSSCCC----------------
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--------CCccHHHHHHHHHHcCCCcccC----------------
Confidence 7889999999999 99999999999999875 235689999999999 999
Q ss_pred hHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Q psy10738 172 VKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL----LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLG 247 (609)
Q Consensus 172 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 247 (609)
+++|+.+|+++++. + ...++.++|.+|.. .+++++|+.+++++++. ++ ..++.++|
T Consensus 130 ----~~~A~~~~~~a~~~----~----~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~----~~----~~a~~~lg 189 (273)
T 1ouv_A 130 ----FKKAVEYFTKACDL----N----DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL----KD----SPGCFNAG 189 (273)
T ss_dssp ----HHHHHHHHHHHHHT----T----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TC----HHHHHHHH
T ss_pred ----HHHHHHHHHHHHhc----C----cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----CC----HHHHHHHH
Confidence 99999999999875 2 24578999999999 99999999999999875 22 34889999
Q ss_pred HHHHH----hCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHH
Q psy10738 248 NSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----LRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 248 ~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~ 312 (609)
.+|.. .+++++|+.+|+++++.. + ..+++.+|.+|.. .+++++|+.+|+++++..+.
T Consensus 190 ~~~~~g~~~~~~~~~A~~~~~~a~~~~----~----~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~ 254 (273)
T 1ouv_A 190 NMYHHGEGATKNFKEALARYSKACELE----N----GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 254 (273)
T ss_dssp HHHHHTCSSCCCHHHHHHHHHHHHHTT----C----HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCH
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHhCC----C----HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCH
Confidence 99999 999999999999998752 1 5688999999999 99999999999999987543
No 56
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.80 E-value=2.5e-17 Score=154.11 Aligned_cols=195 Identities=21% Similarity=0.219 Sum_probs=172.6
Q ss_pred HHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q psy10738 32 LCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLK 111 (609)
Q Consensus 32 ~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~ 111 (609)
++..|++++|...++.... ++...+.++..+|.++...|++++|+.++++++.+++..++.+..+.++.++|.++.
T Consensus 2 ~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 77 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLA----HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER 77 (203)
T ss_dssp -----CHHHHHHHHHHHHT----STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 4568999999996555433 233357799999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHH
Q psy10738 112 VMGKYDEAMVCCKRHLEISRQLND-KLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALM 190 (609)
Q Consensus 112 ~~g~~~~A~~~~~~al~l~~~~~d-~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 190 (609)
..|++++|+.++++++.+.+..++ +...+.++.++|.++...|+ +++|+.++++++.+.
T Consensus 78 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~--------------------~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 78 MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGD--------------------LAGARQEYEKSLVYA 137 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTC--------------------HHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCC--------------------HHHHHHHHHHHHHHH
Confidence 999999999999999999998884 44788999999999999999 999999999999999
Q ss_pred HHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy10738 191 KEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSH 250 (609)
Q Consensus 191 ~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 250 (609)
+..++....+.++.++|.++...|++++|+.++++++.+....++....+.+..+++.+.
T Consensus 138 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T 3gw4_A 138 QQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELMTRLNGLE 197 (203)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHhcccchh
Confidence 999998888999999999999999999999999999999999999888888887777653
No 57
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.79 E-value=2.4e-17 Score=154.25 Aligned_cols=194 Identities=21% Similarity=0.207 Sum_probs=137.9
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHH
Q psy10738 111 KVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALM 190 (609)
Q Consensus 111 ~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 190 (609)
...|++++|...++.. .+++...+.++..+|.++...|+ +++|+.++++++.+.
T Consensus 3 ~~~g~~~~A~~~~~~~------~~~~~~~~~~~~~l~~~~~~~g~--------------------~~~A~~~~~~al~~~ 56 (203)
T 3gw4_A 3 FEAHDYALAERQAQAL------LAHPATASGARFMLGYVYAFMDR--------------------FDEARASFQALQQQA 56 (203)
T ss_dssp ----CHHHHHHHHHHH------HTSTTTHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHh------cCChHHHHHHHHHHHHHHHHhCc--------------------HHHHHHHHHHHHHHH
Confidence 3467777777744332 12333556777777777777777 777777777777777
Q ss_pred HHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 191 KEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFG-DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 269 (609)
Q Consensus 191 ~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 269 (609)
+..++.+..+.++.++|.++...|++++|+.++++++.+.+..+ ++.....++.++|.++...|++++|+.++++++.+
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 57 QKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777766 34456667777777777777777777777777777
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Q psy10738 270 AQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAH 330 (609)
Q Consensus 270 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~ 330 (609)
.+..++....+.++..+|.++...|++++|+.++++++.+....++......+...++.+.
T Consensus 137 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T 3gw4_A 137 AQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELMTRLNGLE 197 (203)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHhcccchh
Confidence 7777776666777777777777777777777777777777777777776666666666543
No 58
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.79 E-value=5.2e-19 Score=170.47 Aligned_cols=201 Identities=19% Similarity=0.209 Sum_probs=121.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|..+...|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+....++
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~ 94 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDA----IPYINFANLLSSVNELERALAFYDKALEL------DSSAATAY 94 (243)
T ss_dssp -----------------CCTTHHHHHTTCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCcchHHH
Confidence 344557777777777777777777777766653 36667777777777777777777777766 44556677
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYY 183 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 183 (609)
..+|.++...|++++|+.+++++++..+ ....++..+|.++...|+ +++|+.++
T Consensus 95 ~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~--------------------~~~A~~~~ 148 (243)
T 2q7f_A 95 YGAGNVYVVKEMYKEAKDMFEKALRAGM------ENGDLFYMLGTVLVKLEQ--------------------PKLALPYL 148 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTC------CSHHHHHHHHHHHHHTSC--------------------HHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcc--------------------HHHHHHHH
Confidence 7777777777777777777777766543 224466677777777777 77777777
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q psy10738 184 EQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHY 263 (609)
Q Consensus 184 ~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 263 (609)
++++... +....++..+|.++...|++++|+.++++++...+.. ..++..+|.+|...|++++|+.++
T Consensus 149 ~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~ 216 (243)
T 2q7f_A 149 QRAVELN------ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGH------ADAFYNAGVTYAYKENREKALEML 216 (243)
T ss_dssp HHHHHHC------TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCTTHHHHHH
T ss_pred HHHHHhC------CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHccCHHHHHHHH
Confidence 7766652 2223456666777777777777777777666653321 125666666666677777777766
Q ss_pred HHHHHHHHH
Q psy10738 264 KRTLVLAQD 272 (609)
Q Consensus 264 ~~al~~~~~ 272 (609)
++++.+.+.
T Consensus 217 ~~~~~~~p~ 225 (243)
T 2q7f_A 217 DKAIDIQPD 225 (243)
T ss_dssp HHHHHHCTT
T ss_pred HHHHccCcc
Confidence 666665543
No 59
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.79 E-value=3e-19 Score=172.13 Aligned_cols=221 Identities=21% Similarity=0.198 Sum_probs=163.6
Q ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCc
Q psy10738 57 RTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDK 136 (609)
Q Consensus 57 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~ 136 (609)
...+..++.+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+
T Consensus 20 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~----- 88 (243)
T 2q7f_A 20 HMASMTGGQQMGRGSEFGDYEKAAEAFTKAIEE------NKEDAIPYINFANLLSSVNELERALAFYDKALELDS----- 88 (243)
T ss_dssp ----------------------CCTTHHHHHTT------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----
T ss_pred hhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-----
Confidence 345678899999999999999999999999886 666788999999999999999999999999998755
Q ss_pred HHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCH
Q psy10738 137 LSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNF 216 (609)
Q Consensus 137 ~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~ 216 (609)
....++..+|.++...|+ +++|+.+++++++.. +....++..+|.++...|++
T Consensus 89 -~~~~~~~~la~~~~~~~~--------------------~~~A~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~ 141 (243)
T 2q7f_A 89 -SAATAYYGAGNVYVVKEM--------------------YKEAKDMFEKALRAG------MENGDLFYMLGTVLVKLEQP 141 (243)
T ss_dssp -TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHTSCH
T ss_pred -cchHHHHHHHHHHHHhcc--------------------HHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhccH
Confidence 346788999999999999 999999999998873 22345788999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCH
Q psy10738 217 KQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDY 296 (609)
Q Consensus 217 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 296 (609)
++|+.++++++...+.. ..++..+|.++...|++++|+.++++++...+.. ..++..+|.+|...|++
T Consensus 142 ~~A~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~ 209 (243)
T 2q7f_A 142 KLALPYLQRAVELNEND------TEARFQFGMCLANEGMLDEALSQFAAVTEQDPGH------ADAFYNAGVTYAYKENR 209 (243)
T ss_dssp HHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHHHccCH
Confidence 99999999999875432 2378899999999999999999999998875542 56889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHc
Q psy10738 297 PTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAAR 333 (609)
Q Consensus 297 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~ 333 (609)
++|+.++++++.+.+.. ..++..++.+....
T Consensus 210 ~~A~~~~~~~~~~~p~~------~~~~~~~~~l~~~~ 240 (243)
T 2q7f_A 210 EKALEMLDKAIDIQPDH------MLALHAKKLLGHHH 240 (243)
T ss_dssp THHHHHHHHHHHHCTTC------HHHHHHHTC-----
T ss_pred HHHHHHHHHHHccCcch------HHHHHHHHHHHhhc
Confidence 99999999999876542 23555555444433
No 60
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.78 E-value=5.1e-18 Score=169.26 Aligned_cols=256 Identities=10% Similarity=-0.011 Sum_probs=205.0
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHH
Q psy10738 28 EGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLG 107 (609)
Q Consensus 28 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg 107 (609)
....++..|+|.+|+..+++....+|++ .......++.+|..+|+++.|+..++.. .+....++..++
T Consensus 5 ~~~~~~~~g~y~~ai~~~~~~~~~~p~~---~~e~~~~l~r~yi~~g~~~~al~~~~~~---------~~~~~~a~~~la 72 (291)
T 3mkr_A 5 DVKNAFYIGSYQQCINEAQRVKPSSPER---DVERDVFLYRAYLAQRKYGVVLDEIKPS---------SAPELQAVRMFA 72 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCSHHH---HHHHHHHHHHHHHHTTCHHHHHHHSCTT---------SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCchh---hHHHHHHHHHHHHHCCCHHHHHHHhccc---------CChhHHHHHHHH
Confidence 3567889999999999998876666554 2346677899999999999999866541 233578889999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHH
Q psy10738 108 NTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNL 187 (609)
Q Consensus 108 ~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 187 (609)
..+...|++++|+..+++.+... ..+....+++.+|.++...|+ +++|+..+++
T Consensus 73 ~~~~~~~~~~~A~~~l~~ll~~~----~~P~~~~~~~~la~~~~~~g~--------------------~~~Al~~l~~-- 126 (291)
T 3mkr_A 73 EYLASHSRRDAIVAELDREMSRS----VDVTNTTFLLMAASIYFYDQN--------------------PDAALRTLHQ-- 126 (291)
T ss_dssp HHHHCSTTHHHHHHHHHHHHHSC----CCCSCHHHHHHHHHHHHHTTC--------------------HHHHHHHHTT--
T ss_pred HHHcCCCcHHHHHHHHHHHHhcc----cCCCCHHHHHHHHHHHHHCCC--------------------HHHHHHHHhC--
Confidence 99999999999999999876531 011345689999999999999 9999999887
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH----HHHHHhCCHHHHHHHH
Q psy10738 188 ALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLG----NSHIFLGEYQAASEHY 263 (609)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la----~~~~~~g~~~~A~~~~ 263 (609)
+ ....++..+|.++..+|++++|+..++++++..+. . ....++ .++...|++++|+..|
T Consensus 127 ------~---~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~--~------~~~~l~~a~~~l~~~~~~~~eA~~~~ 189 (291)
T 3mkr_A 127 ------G---DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED--A------TLTQLATAWVSLAAGGEKLQDAYYIF 189 (291)
T ss_dssp ------C---CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--C------HHHHHHHHHHHHHHCTTHHHHHHHHH
T ss_pred ------C---CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC--c------HHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 1 23458889999999999999999999999887432 1 222232 2233458999999999
Q ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHH-HHHH
Q psy10738 264 KRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEK-ALYF 342 (609)
Q Consensus 264 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~-A~~~ 342 (609)
++++...+. ...+++.+|.++...|++++|+.++++++.+.+. ...++.++|.++...|++.+ +..+
T Consensus 190 ~~~l~~~p~------~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~------~~~~l~~l~~~~~~~g~~~eaa~~~ 257 (291)
T 3mkr_A 190 QEMADKCSP------TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSG------HPETLINLVVLSQHLGKPPEVTNRY 257 (291)
T ss_dssp HHHHHHSCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 999987553 2678999999999999999999999999988655 35589999999999999976 5689
Q ss_pred HHHHHHHH
Q psy10738 343 ATKHLEIS 350 (609)
Q Consensus 343 ~~~al~l~ 350 (609)
+++++++.
T Consensus 258 ~~~~~~~~ 265 (291)
T 3mkr_A 258 LSQLKDAH 265 (291)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99998876
No 61
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.78 E-value=1e-18 Score=186.76 Aligned_cols=216 Identities=16% Similarity=0.184 Sum_probs=182.2
Q ss_pred hHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCH
Q psy10738 38 CRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDY-QKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKY 116 (609)
Q Consensus 38 ~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~-~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~ 116 (609)
+++++..++++....|.+ +.+++.+|.++...|++ ++|+.+|++++++ .+....++..+|.+|...|++
T Consensus 84 ~~~al~~l~~~~~~~~~~----a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~ 153 (474)
T 4abn_A 84 MEKTLQQMEEVLGSAQVE----AQALMLKGKALNVTPDYSPEAEVLLSKAVKL------EPELVEAWNQLGEVYWKKGDV 153 (474)
T ss_dssp HHHHHHHHHHHHTTCCCC----HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHhccCchh----HHHHHHHHHHHHhccccHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcCCH
Confidence 566667777766666655 55899999999999999 9999999999999 777889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHc---------ccccccCCCCCCCCCchHhHHhHHHHHHHHHHHH
Q psy10738 117 DEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAK---------GKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNL 187 (609)
Q Consensus 117 ~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 187 (609)
++|+.+|++++++.+ . ..++.++|.+|... |+ +++|+.+|++++
T Consensus 154 ~~A~~~~~~al~~~p------~-~~~~~~lg~~~~~~~~~~~~~~~g~--------------------~~~A~~~~~~al 206 (474)
T 4abn_A 154 TSAHTCFSGALTHCK------N-KVSLQNLSMVLRQLQTDSGDEHSRH--------------------VMDSVRQAKLAV 206 (474)
T ss_dssp HHHHHHHHHHHTTCC------C-HHHHHHHHHHHTTCCCSCHHHHHHH--------------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCC------C-HHHHHHHHHHHHHhccCChhhhhhh--------------------HHHHHHHHHHHH
Confidence 999999999998754 2 47999999999999 88 999999999999
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 188 ALMKEINDTAAQGRACGNLGNTYYLL--------GNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAA 259 (609)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~lg~~~~~~--------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 259 (609)
++ .+....++.++|.+|... |++++|+.+|++++++.+.. .....+++++|.+|...|++++|
T Consensus 207 ~~------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~~~~lg~~~~~~g~~~~A 277 (474)
T 4abn_A 207 QM------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKA---SSNPDLHLNRATLHKYEESYGEA 277 (474)
T ss_dssp HH------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGG---GGCHHHHHHHHHHHHHTTCHHHH
T ss_pred Hh------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCc---ccCHHHHHHHHHHHHHcCCHHHH
Confidence 88 344567899999999999 99999999999999885510 01234888999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q psy10738 260 SEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLR 305 (609)
Q Consensus 260 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 305 (609)
+.+|++++.+.+.. ..++..++.++...|++++|+..+.+
T Consensus 278 ~~~~~~al~l~p~~------~~a~~~l~~~~~~lg~~~eAi~~~~~ 317 (474)
T 4abn_A 278 LEGFSQAAALDPAW------PEPQQREQQLLEFLSRLTSLLESKGK 317 (474)
T ss_dssp HHHHHHHHHHCTTC------HHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998887653 56788888888888888888776543
No 62
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.78 E-value=4.8e-18 Score=156.83 Aligned_cols=169 Identities=23% Similarity=0.296 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
+.+|+.+|.+|...|++++|+.+|++++++ .|....++..+|.+|...|++++|+..+.+++...+ ..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~------~~ 72 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKA------DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDT------TS 72 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC------CC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc------hh
Confidence 458999999999999999999999999999 788899999999999999999999999999988765 45
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQA 219 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 219 (609)
..++..+|.++...++ ++.|...+.+++.+ .+....++..+|.+|..+|++++|
T Consensus 73 ~~~~~~~~~~~~~~~~--------------------~~~a~~~~~~a~~~------~~~~~~~~~~lg~~~~~~g~~~~A 126 (184)
T 3vtx_A 73 AEAYYILGSANFMIDE--------------------KQAAIDALQRAIAL------NTVYADAYYKLGLVYDSMGEHDKA 126 (184)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHh------CccchHHHHHHHHHHHHhCCchhH
Confidence 6788899999999999 99999999999887 344467889999999999999999
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 220 IYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 272 (609)
Q Consensus 220 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 272 (609)
+.+|++++++.+... .++.++|.+|..+|++++|+.+|++++++.+.
T Consensus 127 ~~~~~~~l~~~p~~~------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 127 IEAYEKTISIKPGFI------RAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHhcchhh------hHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 999999998865433 38999999999999999999999999998775
No 63
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.77 E-value=5.3e-18 Score=164.62 Aligned_cols=210 Identities=18% Similarity=0.142 Sum_probs=178.1
Q ss_pred chhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Q psy10738 55 DLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLN 134 (609)
Q Consensus 55 ~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 134 (609)
++...+.++..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++...+
T Consensus 32 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--- 102 (252)
T 2ho1_A 32 GRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEI------DPSSADAHAALAVVFQTEMEPKLADEEYRKALASDS--- 102 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---
T ss_pred chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc---
Confidence 44445778999999999999999999999999988 566788999999999999999999999999998755
Q ss_pred CcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC
Q psy10738 135 DKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG 214 (609)
Q Consensus 135 d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 214 (609)
....++..+|.+|...|+ +++|+.++++++. .+..+....++..+|.++...|
T Consensus 103 ---~~~~~~~~la~~~~~~g~--------------------~~~A~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~g 155 (252)
T 2ho1_A 103 ---RNARVLNNYGGFLYEQKR--------------------YEEAYQRLLEASQ----DTLYPERSRVFENLGLVSLQMK 155 (252)
T ss_dssp ---TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHTT----CTTCTTHHHHHHHHHHHHHHTT
T ss_pred ---CcHHHHHHHHHHHHHHhH--------------------HHHHHHHHHHHHh----CccCcccHHHHHHHHHHHHHcC
Confidence 345688999999999999 9999999999887 2234556778999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhC
Q psy10738 215 NFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLR 294 (609)
Q Consensus 215 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 294 (609)
++++|+.++++++...+.. ..++..+|.++...|++++|+.++++++...+. ...++..++.++...|
T Consensus 156 ~~~~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g 223 (252)
T 2ho1_A 156 KPAQAKEYFEKSLRLNRNQ------PSVALEMADLLYKEREYVPARQYYDLFAQGGGQ------NARSLLLGIRLAKVFE 223 (252)
T ss_dssp CHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCC------CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC------cHHHHHHHHHHHHHcc
Confidence 9999999999998875432 347889999999999999999999998875442 2557888999999999
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy10738 295 DYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 295 ~~~~A~~~~~~al~~~~~ 312 (609)
++++|..++++++...+.
T Consensus 224 ~~~~A~~~~~~~~~~~p~ 241 (252)
T 2ho1_A 224 DRDTAASYGLQLKRLYPG 241 (252)
T ss_dssp CHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHCCC
Confidence 999999999999877554
No 64
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.77 E-value=1.7e-17 Score=153.03 Aligned_cols=167 Identities=21% Similarity=0.324 Sum_probs=152.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|.++...|++++|+..|+++++.+|++.. ++..+|.+|...|++++|+..+.+++.. .+....++
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~la~~~~~~~~~~~a~~~~~~~~~~------~~~~~~~~ 76 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVE----TLLKLGKTYMDIGLPNDAIESLKKFVVL------DTTSAEAY 76 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCCCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHCCCHHHHHHHHHHHHhc------CchhHHHH
Confidence 3445699999999999999999999999999854 8999999999999999999999999988 77778899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYY 183 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 183 (609)
..+|.++...++++.|...+.+++.+.+ ....++..+|.+|...|+ +++|+.+|
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~a~~~~~------~~~~~~~~lg~~~~~~g~--------------------~~~A~~~~ 130 (184)
T 3vtx_A 77 YILGSANFMIDEKQAAIDALQRAIALNT------VYADAYYKLGLVYDSMGE--------------------HDKAIEAY 130 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCc------cchHHHHHHHHHHHHhCC--------------------chhHHHHH
Confidence 9999999999999999999999998866 456789999999999999 99999999
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 184 EQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 184 ~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 232 (609)
++++++ .+....++.++|.+|..+|++++|+.+|++++++.+.
T Consensus 131 ~~~l~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 131 EKTISI------KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHh------cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 999988 4455779999999999999999999999999998665
No 65
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.9e-16 Score=166.84 Aligned_cols=232 Identities=11% Similarity=0.112 Sum_probs=210.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcch-------------hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDL-------------RTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLAR 91 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-------------~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 91 (609)
.+.+|..+...|+|++|++.|.++++..+... .....++..+|.+|...|++++|++++.+++....
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 45578899999999999999999999866422 23456789999999999999999999999999998
Q ss_pred HcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchH
Q psy10738 92 NMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEE 171 (609)
Q Consensus 92 ~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~ 171 (609)
..++......+...+|.++...|++++|+.++++++.+....++....+.++.++|.+|...|+
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---------------- 150 (434)
T 4b4t_Q 87 QFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQ---------------- 150 (434)
T ss_dssp TSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTC----------------
T ss_pred HccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccC----------------
Confidence 8877777778889999999999999999999999999999999888899999999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCh-HHHHHHHHHHHHHH
Q psy10738 172 VKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDK-AAERRANSNLGNSH 250 (609)
Q Consensus 172 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~la~~~ 250 (609)
|.+|+.++++++.......+.+....++..+|.+|...|++++|..++++++.+.....++ ...+..+..+|.++
T Consensus 151 ----~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~ 226 (434)
T 4b4t_Q 151 ----YKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILH 226 (434)
T ss_dssp ----HHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred ----hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH
Confidence 9999999999999998888889999999999999999999999999999999999887765 45678899999999
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHcCCc
Q psy10738 251 IFLGEYQAASEHYKRTLVLAQDLGDR 276 (609)
Q Consensus 251 ~~~g~~~~A~~~~~~al~~~~~~~~~ 276 (609)
...|+|++|..+|.+++......+..
T Consensus 227 ~~~~~y~~A~~~~~~a~~~~~~~~~~ 252 (434)
T 4b4t_Q 227 CEDKDYKTAFSYFFESFESYHNLTTH 252 (434)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHhHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999998877543
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.76 E-value=3.5e-17 Score=155.26 Aligned_cols=205 Identities=18% Similarity=0.133 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
..++..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+ ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~------~~ 75 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKS------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKP------DS 75 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHh------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC------CC
Confidence 568899999999999999999999999988 566678999999999999999999999999998755 34
Q ss_pred HHHHHHHHHHHHHc-ccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHH
Q psy10738 140 GRALYNLGNVYHAK-GKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQ 218 (609)
Q Consensus 140 ~~~~~~lg~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 218 (609)
..++..+|.++... |+ +++|+.++++++. .+..+....++.++|.++...|++++
T Consensus 76 ~~~~~~l~~~~~~~~~~--------------------~~~A~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~ 131 (225)
T 2vq2_A 76 AEINNNYGWFLCGRLNR--------------------PAESMAYFDKALA----DPTYPTPYIANLNKGICSAKQGQFGL 131 (225)
T ss_dssp HHHHHHHHHHHHTTTCC--------------------HHHHHHHHHHHHT----STTCSCHHHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHHHHHHHhcCc--------------------HHHHHHHHHHHHc----CcCCcchHHHHHHHHHHHHHcCCHHH
Confidence 56889999999999 99 9999999999887 22344456788999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHhCCHH
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ-DLGDRAVEAQACYSLGNTYTLLRDYP 297 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~ 297 (609)
|+.+++++++..+.. ..++..+|.++...|++++|+.++++++...+ .. ..++..++.++...|+++
T Consensus 132 A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 199 (225)
T 2vq2_A 132 AEAYLKRSLAAQPQF------PPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQ------ADDLLLGWKIAKALGNAQ 199 (225)
T ss_dssp HHHHHHHHHHHSTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCCCC------chHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHhcCcHH
Confidence 999999998875432 23788999999999999999999999998765 32 445677888889999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy10738 298 TAIDYHLRHLIIAQQ 312 (609)
Q Consensus 298 ~A~~~~~~al~~~~~ 312 (609)
+|..+++.+....+.
T Consensus 200 ~a~~~~~~~~~~~p~ 214 (225)
T 2vq2_A 200 AAYEYEAQLQANFPY 214 (225)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999888766443
No 67
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.76 E-value=1.4e-16 Score=159.03 Aligned_cols=195 Identities=11% Similarity=0.013 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTL--SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEA 100 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~--a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~ 100 (609)
..+...+..++..|+|++|+..++++++..+..+... ...+..+|.++...|++++|+.++++++.+.....+....+
T Consensus 76 ~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~ 155 (293)
T 3u3w_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNL 155 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHH
Confidence 3444458889999999999999999999877655432 44566799999999999999999999999766666666678
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHH
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL-NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEA 179 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~-~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A 179 (609)
.++.++|.+|...|++++|+.+|++++++.... .+....+.+++++|.+|...|+ |++|
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~--------------------y~~A 215 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR--------------------YEES 215 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTC--------------------HHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhH--------------------HHHH
Confidence 899999999999999999999999999999887 6677888899999999999999 9999
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhCChH
Q psy10738 180 IKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG-NFKQAIYYHQERLKIAREFGDKA 237 (609)
Q Consensus 180 ~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~ 237 (609)
+.++++++++.+..++....+.++.++|.+|..+| .+++|+.++++|+.++...++..
T Consensus 216 ~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~~~ 274 (293)
T 3u3w_A 216 LYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHA 274 (293)
T ss_dssp HHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCTG
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999888888999999999999999 57999999999999999877643
No 68
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.76 E-value=6.6e-17 Score=161.38 Aligned_cols=201 Identities=13% Similarity=0.033 Sum_probs=168.1
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhH
Q psy10738 97 LGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCL 176 (609)
Q Consensus 97 ~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 176 (609)
+.....+...+..+...|++++|+.++.++++..+...+.......++.+|.++...|+ +
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~ 131 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVD--------------------Y 131 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSC--------------------H
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCC--------------------H
Confidence 34455667788899999999999999999888654333333455667789999999999 9
Q ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHHHhCC
Q psy10738 177 QEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAE-RRANSNLGNSHIFLGE 255 (609)
Q Consensus 177 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~la~~~~~~g~ 255 (609)
++|+.++++++.+.....+....+.++.++|.+|...|++++|+.++++++++....++.... ..+++++|.+|..+|+
T Consensus 132 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~ 211 (293)
T 2qfc_A 132 EYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR 211 (293)
T ss_dssp HHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhh
Confidence 999999999998776666666678899999999999999999999999999988877654433 3789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHHhcchh
Q psy10738 256 YQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA-IDYHLRHLIIAQQLMDRV 317 (609)
Q Consensus 256 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~~~~~~~~ 317 (609)
+++|+.++++++.+....++....+.+++++|.+|..+|++++| ..++++|+.+....++..
T Consensus 212 y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~~ 274 (293)
T 2qfc_A 212 YEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHA 274 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcHh
Confidence 99999999999999887777777788999999999999999999 888999999988876643
No 69
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.76 E-value=3.3e-17 Score=159.04 Aligned_cols=205 Identities=15% Similarity=0.047 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
...+...|..+...|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+....
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~~ 106 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSA----DAHAALAVVFQTEMEPKLADEEYRKALAS------DSRNAR 106 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CcCcHH
Confidence 34556679999999999999999999999998874 48899999999999999999999999988 566688
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIK 181 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~ 181 (609)
++..+|.++...|++++|+.++++++. .+..+....++..+|.++...|+ +++|+.
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~g~--------------------~~~A~~ 162 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQ----DTLYPERSRVFENLGLVSLQMKK--------------------PAQAKE 162 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTT----CTTCTTHHHHHHHHHHHHHHTTC--------------------HHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh----CccCcccHHHHHHHHHHHHHcCC--------------------HHHHHH
Confidence 999999999999999999999999987 22334567899999999999999 999999
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHH
Q psy10738 182 YYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASE 261 (609)
Q Consensus 182 ~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 261 (609)
++++++... +....++..+|.++...|++++|+.++++++...+.. ..++..++.++...|++++|..
T Consensus 163 ~~~~~~~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~A~~ 230 (252)
T 2ho1_A 163 YFEKSLRLN------RNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQN------ARSLLLGIRLAKVFEDRDTAAS 230 (252)
T ss_dssp HHHHHHHHC------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCC------HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHhcC------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc------HHHHHHHHHHHHHccCHHHHHH
Confidence 999998873 2235688999999999999999999999998754422 2378889999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10738 262 HYKRTLVLAQD 272 (609)
Q Consensus 262 ~~~~al~~~~~ 272 (609)
++++++...+.
T Consensus 231 ~~~~~~~~~p~ 241 (252)
T 2ho1_A 231 YGLQLKRLYPG 241 (252)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHHCCC
Confidence 99999887654
No 70
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.76 E-value=5.5e-17 Score=161.94 Aligned_cols=201 Identities=9% Similarity=-0.035 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHH
Q psy10738 139 EGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQ 218 (609)
Q Consensus 139 ~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 218 (609)
....+...+..+...|+ |++|+.++.++++..+...........+..+|.++...|++++
T Consensus 74 ~~~~l~~~~~~~~~~~~--------------------y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKR--------------------YKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEY 133 (293)
T ss_dssp HHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHH
T ss_pred HHHHHHHHHHHHHHhhh--------------------HHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHH
Confidence 34456678888999999 9999999999887644322233455667889999999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHhCCHH
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAV-EAQACYSLGNTYTLLRDYP 297 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~ 297 (609)
|+.++++++.+.....+....+.++.++|.+|...|++++|+.+|++++.+.....+... ...+++++|.+|..+|+|+
T Consensus 134 A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~ 213 (293)
T 2qfc_A 134 CILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYE 213 (293)
T ss_dssp HHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHH
Confidence 999999999887766666667789999999999999999999999999999887765433 3489999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHcCCCchH
Q psy10738 298 TAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKA-LYFATKHLEISKQLGDPLGQ 359 (609)
Q Consensus 298 ~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A-~~~~~~al~l~~~~~~~~~~ 359 (609)
+|+.++++++.+....++....+.++..+|.+|..+|++++| ..++++|+.+++..++....
T Consensus 214 ~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 214 ESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcHhhH
Confidence 999999999999988777778899999999999999999999 88899999999998876553
No 71
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.75 E-value=6.7e-18 Score=187.93 Aligned_cols=171 Identities=23% Similarity=0.299 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLS 138 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~ 138 (609)
.+.+|+++|.+|..+|++++|+.+|++++++ .+..+.++.++|.+|..+|++++|+.+|++++++.+ .
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P------~ 75 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEV------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP------T 75 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------T
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------C
Confidence 4668899999999999999999999999988 777888999999999999999999999999998866 5
Q ss_pred HHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHH
Q psy10738 139 EGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQ 218 (609)
Q Consensus 139 ~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 218 (609)
.+.+++++|.+|..+|+ +++|+.+|++++++ .+....++.++|.+|..+|++++
T Consensus 76 ~~~a~~nLg~~l~~~g~--------------------~~~A~~~~~kAl~l------~P~~~~a~~~Lg~~~~~~g~~~e 129 (723)
T 4gyw_A 76 FADAYSNMGNTLKEMQD--------------------VQGALQCYTRAIQI------NPAFADAHSNLASIHKDSGNIPE 129 (723)
T ss_dssp CHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHH
Confidence 56788999999999999 99999999999887 45557789999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 273 (609)
|+.+|++++++.+... .++.++|.++..+|++++|++.+++++++.++.
T Consensus 130 Ai~~~~~Al~l~P~~~------~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 130 AIASYRTALKLKPDFP------DAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp HHHHHHHHHHHCSCCH------HHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCh------HHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 9999999998865443 388899999999999999999999998887653
No 72
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.75 E-value=3.5e-18 Score=182.74 Aligned_cols=219 Identities=16% Similarity=0.106 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHc-CChhhHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccc
Q psy10738 79 AMQYHKQDLTLARNM-EDKLGEAKSSGNLGNTLKVMGKY-DEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKA 156 (609)
Q Consensus 79 A~~~~~~al~~~~~~-~d~~~~~~a~~~lg~~~~~~g~~-~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~ 156 (609)
....+++++...... ...+..+.+++.+|.++...|++ ++|+.+|++++++.+ ....+++.+|.+|...|+
T Consensus 80 ~~~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p------~~~~a~~~lg~~~~~~g~- 152 (474)
T 4abn_A 80 VQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEP------ELVEAWNQLGEVYWKKGD- 152 (474)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCC------CCHHHHHHHHHHHHHcCC-
Confidence 334444444444322 33566789999999999999999 999999999999876 456799999999999999
Q ss_pred cccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHH
Q psy10738 157 IGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLL---------GNFKQAIYYHQERL 227 (609)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~---------g~~~~A~~~~~~al 227 (609)
+++|+.+|++++++. +. ..++.++|.++... |++++|+.+|++++
T Consensus 153 -------------------~~~A~~~~~~al~~~------p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al 206 (474)
T 4abn_A 153 -------------------VTSAHTCFSGALTHC------KN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAV 206 (474)
T ss_dssp -------------------HHHHHHHHHHHHTTC------CC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------HHHHHHHHHHHHhhC------CC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHH
Confidence 999999999999873 22 47999999999999 99999999999999
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 228 KIAREFGDKAAERRANSNLGNSHIFL--------GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 299 (609)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~la~~~~~~--------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 299 (609)
++.+... .++.++|.+|... |++++|+.+|++++.+.+.. .....+++.+|.+|...|++++|
T Consensus 207 ~~~p~~~------~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~~~~lg~~~~~~g~~~~A 277 (474)
T 4abn_A 207 QMDVLDG------RSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKA---SSNPDLHLNRATLHKYEESYGEA 277 (474)
T ss_dssp HHCTTCH------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGG---GGCHHHHHHHHHHHHHTTCHHHH
T ss_pred HhCCCCH------HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCc---ccCHHHHHHHHHHHHHcCCHHHH
Confidence 9866543 3899999999999 99999999999999986610 12378999999999999999999
Q ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHH
Q psy10738 300 IDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATK 345 (609)
Q Consensus 300 ~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~ 345 (609)
+.+|++++.+.+.. ..++..++.++..+|++++|+..+.+
T Consensus 278 ~~~~~~al~l~p~~------~~a~~~l~~~~~~lg~~~eAi~~~~~ 317 (474)
T 4abn_A 278 LEGFSQAAALDPAW------PEPQQREQQLLEFLSRLTSLLESKGK 317 (474)
T ss_dssp HHHHHHHHHHCTTC------HHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999886653 45889999999999999999886544
No 73
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.75 E-value=2.9e-16 Score=140.28 Aligned_cols=161 Identities=71% Similarity=1.111 Sum_probs=151.9
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Q psy10738 194 NDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 194 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 273 (609)
+++...+.++..+|.++...|++++|+.++++++.+.+..++....+.++.++|.++...|++++|+.++++++.+.+..
T Consensus 3 ~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 3 GSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 56677888999999999999999999999999999999999988889999999999999999999999999999999998
Q ss_pred CCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHc
Q psy10738 274 GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQL 353 (609)
Q Consensus 274 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~ 353 (609)
++......++..+|.++...|++++|+.++++++.+.+..++......++..+|.++...|++++|..++++++++.++.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 83 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 162 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 88888899999999999999999999999999999999988888889999999999999999999999999999998766
Q ss_pred C
Q psy10738 354 G 354 (609)
Q Consensus 354 ~ 354 (609)
+
T Consensus 163 ~ 163 (164)
T 3ro3_A 163 G 163 (164)
T ss_dssp -
T ss_pred C
Confidence 5
No 74
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.75 E-value=2.1e-17 Score=162.37 Aligned_cols=233 Identities=14% Similarity=-0.035 Sum_probs=188.9
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q psy10738 68 NAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLG 147 (609)
Q Consensus 68 ~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg 147 (609)
..+...|++++|+..++++++.. ..+.+..+.++..+|.++...|++++|+.+|++++.+.+ ....++..+|
T Consensus 13 ~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~------~~~~~~~~la 84 (275)
T 1xnf_A 13 VPLQPTLQQEVILARMEQILASR--ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRP------DMPEVFNYLG 84 (275)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC------CCHHHHHHHH
T ss_pred eccCccchHHHHHHHHHHHHhcc--cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCC------CcHHHHHHHH
Confidence 33445688999999999998762 133567899999999999999999999999999999855 3466899999
Q ss_pred HHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy10738 148 NVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERL 227 (609)
Q Consensus 148 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 227 (609)
.+|...|+ +++|+.++++++.+. +....++.++|.+|...|++++|+.++++++
T Consensus 85 ~~~~~~~~--------------------~~~A~~~~~~al~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 138 (275)
T 1xnf_A 85 IYLTQAGN--------------------FDAAYEAFDSVLELD------PTYNYAHLNRGIALYYGGRDKLAQDDLLAFY 138 (275)
T ss_dssp HHHHHTTC--------------------HHHHHHHHHHHHHHC------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHccC--------------------HHHHHHHHHHHHhcC------ccccHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 99999999 999999999999873 3335789999999999999999999999999
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 228 KIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 307 (609)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 307 (609)
.+.+.... ....++ ++...|++++|+.++.+++...+.. ...+.++.++...+++++|+..+.+++
T Consensus 139 ~~~~~~~~------~~~~~~-~~~~~~~~~~A~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~a~~~~~~~~ 204 (275)
T 1xnf_A 139 QDDPNDPF------RSLWLY-LAEQKLDEKQAKEVLKQHFEKSDKE-------QWGWNIVEFYLGNISEQTLMERLKADA 204 (275)
T ss_dssp HHCTTCHH------HHHHHH-HHHHHHCHHHHHHHHHHHHHHSCCC-------STHHHHHHHHTTSSCHHHHHHHHHHHC
T ss_pred HhCCCChH------HHHHHH-HHHHhcCHHHHHHHHHHHHhcCCcc-------hHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 87554321 222223 4467799999999999988765432 122457778888999999999999998
Q ss_pred HHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q psy10738 308 IIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~ 350 (609)
...+.. ......++..+|.+|...|++++|+.++++++.+.
T Consensus 205 ~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 245 (275)
T 1xnf_A 205 TDNTSL--AEHLSETNFYLGKYYLSLGDLDSATALFKLAVANN 245 (275)
T ss_dssp CSHHHH--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred cccccc--cccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC
Confidence 776552 22336789999999999999999999999999864
No 75
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.75 E-value=6.9e-18 Score=187.81 Aligned_cols=175 Identities=25% Similarity=0.328 Sum_probs=158.8
Q ss_pred ChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHH
Q psy10738 95 DKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKV 174 (609)
Q Consensus 95 d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~ 174 (609)
..|..+.++.++|.+|..+|++++|+.+|++++++.+ ....+++++|.+|...|+
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P------~~~~a~~nLg~~l~~~g~------------------- 58 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFP------EFAAAHSNLASVLQQQGK------------------- 58 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS------CCHHHHHHHHHHHHHTTC-------------------
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCC-------------------
Confidence 3577899999999999999999999999999999876 557799999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC
Q psy10738 175 CLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLG 254 (609)
Q Consensus 175 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 254 (609)
+++|+.+|++++++ .+....++.++|.++..+|++++|+++|++++++.+... .++.++|.+|..+|
T Consensus 59 -~~eA~~~~~~Al~l------~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~------~a~~~Lg~~~~~~g 125 (723)
T 4gyw_A 59 -LQEALMHYKEAIRI------SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA------DAHSNLASIHKDSG 125 (723)
T ss_dssp -HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcC
Confidence 99999999999998 455678999999999999999999999999999866543 38999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q psy10738 255 EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 313 (609)
Q Consensus 255 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 313 (609)
++++|+.+|++++++.+.. ..++.++|.++..+|++++|++.+++++++.++.
T Consensus 126 ~~~eAi~~~~~Al~l~P~~------~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 126 NIPEAIASYRTALKLKPDF------PDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp CHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCC------hHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 9999999999999987654 7789999999999999999999999999988764
No 76
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.75 E-value=1.6e-16 Score=150.69 Aligned_cols=204 Identities=20% Similarity=0.107 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
..+...|..++..|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+....+
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~ 78 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKNE----LAWLVRAEIYQYLKVNDKAQESFRQALSI------KPDSAEI 78 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccch----HHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCChHH
Confidence 3455679999999999999999999999999874 48899999999999999999999999998 5667789
Q ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHH
Q psy10738 103 SGNLGNTLKVM-GKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIK 181 (609)
Q Consensus 103 ~~~lg~~~~~~-g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~ 181 (609)
+..+|.++... |++++|+.++++++. .+..+....++..+|.++...|+ +++|+.
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~--------------------~~~A~~ 134 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKALA----DPTYPTPYIANLNKGICSAKQGQ--------------------FGLAEA 134 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHT----STTCSCHHHHHHHHHHHHHHTTC--------------------HHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHc----CcCCcchHHHHHHHHHHHHHcCC--------------------HHHHHH
Confidence 99999999999 999999999999987 22333556789999999999999 999999
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhCChHHHHHHHHHHHHHHHHhCCHHHHH
Q psy10738 182 YYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAR-EFGDKAAERRANSNLGNSHIFLGEYQAAS 260 (609)
Q Consensus 182 ~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 260 (609)
++++++... +....++..+|.++...|++++|+.++++++...+ ... .++..++.++...|+++.|.
T Consensus 135 ~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~a~ 202 (225)
T 2vq2_A 135 YLKRSLAAQ------PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQA------DDLLLGWKIAKALGNAQAAY 202 (225)
T ss_dssp HHHHHHHHS------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCH------HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHhC------CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHhcCcHHHHH
Confidence 999998873 33356889999999999999999999999998765 322 25677888999999999999
Q ss_pred HHHHHHHHHHHH
Q psy10738 261 EHYKRTLVLAQD 272 (609)
Q Consensus 261 ~~~~~al~~~~~ 272 (609)
.+++.+....+.
T Consensus 203 ~~~~~~~~~~p~ 214 (225)
T 2vq2_A 203 EYEAQLQANFPY 214 (225)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhCCC
Confidence 999988776543
No 77
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.75 E-value=1.1e-16 Score=159.75 Aligned_cols=196 Identities=14% Similarity=0.118 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
.+...+..++..|++++|+.++++++.......+.......+..+|.++...|++++|+.++++++.+.....+....+.
T Consensus 77 ~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 156 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLY 156 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHH
Confidence 44556788899999999999999998753222222222456667999999999999999999999997776677667788
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHcCCHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI-NDTAAQGRACGNLGNTYYLLGNFKQAI 220 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~ 220 (609)
++.++|.+|...|+ +++|+.+|+++++..+.. .+....+.++.++|.+|..+|+|++|+
T Consensus 157 ~~~~lg~~y~~~g~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~ 216 (293)
T 3u3w_A 157 IENAIANIYAENGY--------------------LKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESL 216 (293)
T ss_dssp HHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999 999999999999999888 677888889999999999999999999
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCCcH
Q psy10738 221 YYHQERLKIAREFGDKAAERRANSNLGNSHIFLG-EYQAASEHYKRTLVLAQDLGDRA 277 (609)
Q Consensus 221 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~ 277 (609)
.++++++++.+..++....+.++.++|.+|..+| .+++|+.+|++|+.++...++..
T Consensus 217 ~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~~~ 274 (293)
T 3u3w_A 217 YQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHA 274 (293)
T ss_dssp HHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCTG
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999999998887788889999999999999 47999999999999999887654
No 78
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.73 E-value=7.6e-16 Score=137.57 Aligned_cols=162 Identities=37% Similarity=0.568 Sum_probs=151.5
Q ss_pred cCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10738 133 LNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL 212 (609)
Q Consensus 133 ~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~ 212 (609)
.+++...+.++..+|.++...|+ +++|+.++++++.+.+..++....+.++.++|.++..
T Consensus 2 ~~d~~~~~~~~~~l~~~~~~~~~--------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 61 (164)
T 3ro3_A 2 PGSRAAQGRAFGNLGNTHYLLGN--------------------FRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF 61 (164)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhcC--------------------HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 35666788999999999999999 9999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Q psy10738 213 LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL 292 (609)
Q Consensus 213 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 292 (609)
.|++++|+.++++++.+.+..++......++.++|.++...|++++|+.++++++.+.+..++......++..+|.++..
T Consensus 62 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~ 141 (164)
T 3ro3_A 62 LGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA 141 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999888899999999999999999999999999999999988888889999999999999
Q ss_pred hCCHHHHHHHHHHHHHHHHHhc
Q psy10738 293 LRDYPTAIDYHLRHLIIAQQLM 314 (609)
Q Consensus 293 ~g~~~~A~~~~~~al~~~~~~~ 314 (609)
.|++++|+.++++++.+.++.+
T Consensus 142 ~g~~~~A~~~~~~a~~~~~~~~ 163 (164)
T 3ro3_A 142 LGNHDQAMHFAEKHLEISREVG 163 (164)
T ss_dssp HTCHHHHHHHHHHHHHHHTTC-
T ss_pred ccCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999877643
No 79
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.73 E-value=8.5e-17 Score=160.38 Aligned_cols=230 Identities=8% Similarity=-0.060 Sum_probs=182.1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHH
Q psy10738 26 ALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGN 105 (609)
Q Consensus 26 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~ 105 (609)
...+..+...|++++|+..++.. .+ + ...++..++..+...|++++|++.+++.+.. +..|....+++.
T Consensus 38 ~~l~r~yi~~g~~~~al~~~~~~---~~--~--~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~----~~~P~~~~~~~~ 106 (291)
T 3mkr_A 38 VFLYRAYLAQRKYGVVLDEIKPS---SA--P--ELQAVRMFAEYLASHSRRDAIVAELDREMSR----SVDVTNTTFLLM 106 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHSCTT---SC--H--HHHHHHHHHHHHHCSTTHHHHHHHHHHHHHS----CCCCSCHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHhccc---CC--h--hHHHHHHHHHHHcCCCcHHHHHHHHHHHHhc----ccCCCCHHHHHH
Confidence 44588999999999999877552 22 2 2457888999999999999999999988753 113556788999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHH
Q psy10738 106 LGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQ 185 (609)
Q Consensus 106 lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 185 (609)
+|.++...|++++|+.++++ + ....++..+|.+|...|+ +++|+..+++
T Consensus 107 la~~~~~~g~~~~Al~~l~~--------~---~~~~~~~~l~~~~~~~g~--------------------~~~A~~~l~~ 155 (291)
T 3mkr_A 107 AASIYFYDQNPDAALRTLHQ--------G---DSLECMAMTVQILLKLDR--------------------LDLARKELKK 155 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHTT--------C---CSHHHHHHHHHHHHHTTC--------------------HHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhC--------C---CCHHHHHHHHHHHHHCCC--------------------HHHHHHHHHH
Confidence 99999999999999999987 1 345688999999999999 9999999999
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q psy10738 186 NLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKR 265 (609)
Q Consensus 186 al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 265 (609)
++... .+.. .......+..++...|++++|+.+|+++++..+.. ..+++++|.++...|++++|+.+|++
T Consensus 156 ~~~~~---p~~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~------~~~~~~la~~~~~~g~~~eA~~~l~~ 225 (291)
T 3mkr_A 156 MQDQD---EDAT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPT------LLLLNGQAACHMAQGRWEAAEGVLQE 225 (291)
T ss_dssp HHHHC---TTCH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCC------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHhhC---cCcH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 98873 1111 11111111223334589999999999999874432 34899999999999999999999999
Q ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHh
Q psy10738 266 TLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPT-AIDYHLRHLIIAQQL 313 (609)
Q Consensus 266 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~al~~~~~~ 313 (609)
++...+.. +.++.++|.++...|++++ +..++++++++.+..
T Consensus 226 al~~~p~~------~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 226 ALDKDSGH------PETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHCTTC------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHhCCCC------HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCC
Confidence 99987754 7789999999999999976 578999999887654
No 80
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.73 E-value=7.2e-17 Score=171.42 Aligned_cols=294 Identities=15% Similarity=0.116 Sum_probs=188.9
Q ss_pred hhhhHhhhcCCCcchhHHHHHHHH----------HHHHHhcCCh---HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHH
Q psy10738 5 NISSSDSQSGGADGGNMCLELALE----------GERLCKAGDC---RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYF 71 (609)
Q Consensus 5 ~Lg~~~~~~g~~~~a~~~~~l~~~----------g~~~~~~g~~---~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~ 71 (609)
.+|..+.+.|++++|..++..+.. |.++...|++ ++|+.+|+++++. + +.+++.+|.++.
T Consensus 8 ~la~~~~~~g~~~~A~~~~~~aa~~g~~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~---~----~~A~~~Lg~~~~ 80 (452)
T 3e4b_A 8 RLANEALKRGDTVTAQQNYQQLAELGYSEAQVGLADIQVGTRDPAQIKQAEATYRAAADT---S----PRAQARLGRLLA 80 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCTGGGTCC-----------------------------------CHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC---C----HHHHHHHHHHHH
Confidence 356666666666666666655443 6666666666 6777777776654 1 225566666555
Q ss_pred HhC-----CHHHHHHHHHHHHHHHH------------HcC---------------ChhhHHHHHHHHHHHHHHcCCHHHH
Q psy10738 72 YLG-----DYQKAMQYHKQDLTLAR------------NME---------------DKLGEAKSSGNLGNTLKVMGKYDEA 119 (609)
Q Consensus 72 ~~g-----~~~~A~~~~~~al~~~~------------~~~---------------d~~~~~~a~~~lg~~~~~~g~~~~A 119 (609)
..+ ++++|+.+|+++++.-. ..+ .......+++.+|.+|...+.++++
T Consensus 81 ~~~~~~~~~~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g~~~a~~~Lg~~y~~~~~~~~~ 160 (452)
T 3e4b_A 81 AKPGATEAEHHEAESLLKKAFANGEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQGTYDQH 160 (452)
T ss_dssp TC--CCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCGGGG
T ss_pred hCCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcccC
Confidence 444 56667766666654200 000 0112244566677777777766555
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcc---cccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCCh
Q psy10738 120 MVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKG---KAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDT 196 (609)
Q Consensus 120 ~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 196 (609)
............. ++ ..+++++|.+|...| + +++|+.+|+++.+. .
T Consensus 161 ~~~a~~~~~~a~~-~~----~~a~~~Lg~~~~~~g~~~~--------------------~~~A~~~~~~aa~~------g 209 (452)
T 3e4b_A 161 LDDVERICKAALN-TT----DICYVELATVYQKKQQPEQ--------------------QAELLKQMEAGVSR------G 209 (452)
T ss_dssp HHHHHHHHHHHTT-TC----TTHHHHHHHHHHHTTCHHH--------------------HHHHHHHHHHHHHT------T
T ss_pred HHHHHHHHHHHHc-CC----HHHHHHHHHHHHHcCCccc--------------------HHHHHHHHHHHHHC------C
Confidence 5554333332221 12 228899999999988 6 99999999998875 2
Q ss_pred HHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH-H--HHhCCHHHHHHHHHHHHHH
Q psy10738 197 AAQGRACGNLGNTYYLL----GNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNS-H--IFLGEYQAASEHYKRTLVL 269 (609)
Q Consensus 197 ~~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~-~--~~~g~~~~A~~~~~~al~~ 269 (609)
+..+..++++|.+|... +++++|+.+|+++. +.... +++++|.+ + ...+++++|+.+|+++.+.
T Consensus 210 ~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~------a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 210 TVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPA------SWVSLAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp CSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTH------HHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHH------HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 33345668999999765 79999999999987 33333 88999998 4 4689999999999998753
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH----cCChHHHH
Q psy10738 270 AQDLGDRAVEAQACYSLGNTYTLLR-----DYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAA----RGNHEKAL 340 (609)
Q Consensus 270 ~~~~~~~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~----~g~~~~A~ 340 (609)
+ ...++++||.+|. .| ++++|+.+|+++. +. ...++++||.+|.. ..++++|+
T Consensus 281 ----g----~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g------~~~A~~~Lg~~y~~G~g~~~d~~~A~ 342 (452)
T 3e4b_A 281 ----D----QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GR------EVAADYYLGQIYRRGYLGKVYPQKAL 342 (452)
T ss_dssp ----T----CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TT------CHHHHHHHHHHHHTTTTSSCCHHHHH
T ss_pred ----C----CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CC------CHHHHHHHHHHHHCCCCCCcCHHHHH
Confidence 2 2678999999998 66 9999999999988 22 35689999999887 44999999
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q psy10738 341 YFATKHLEISKQLGDPLGQVTAQMNVTDLRK 371 (609)
Q Consensus 341 ~~~~~al~l~~~~~~~~~~~~a~~~la~l~~ 371 (609)
.+|+++.+ .+...+..+|+.+|.
T Consensus 343 ~~~~~Aa~--------~g~~~A~~~Lg~~y~ 365 (452)
T 3e4b_A 343 DHLLTAAR--------NGQNSADFAIAQLFS 365 (452)
T ss_dssp HHHHHHHT--------TTCTTHHHHHHHHHH
T ss_pred HHHHHHHh--------hChHHHHHHHHHHHH
Confidence 99999976 234578889999886
No 81
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.72 E-value=8e-16 Score=162.03 Aligned_cols=241 Identities=12% Similarity=0.082 Sum_probs=210.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCc-----------HHHHHHHHHHHHHHHHcccccccCCCCCCCCCchH
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDK-----------LSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEE 171 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~-----------~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~ 171 (609)
....|..+...|+|++|++.|.++++..+...+. .....++.++|.+|...|+
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~---------------- 70 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGA---------------- 70 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTC----------------
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCC----------------
Confidence 4455677778888888888888888766544332 2345678999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy10738 172 VKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHI 251 (609)
Q Consensus 172 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 251 (609)
+++|++++.+++.+....++......+...+|.++...|++++|+.++++++.+....++....+.++.++|.+|.
T Consensus 71 ----~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 146 (434)
T 4b4t_Q 71 ----KDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY 146 (434)
T ss_dssp ----HHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 9999999999999998887777777888999999999999999999999999999998887777889999999999
Q ss_pred HhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcch-hhHHHHHHHHHHHH
Q psy10738 252 FLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDR-VGEGRACWSLGNAH 330 (609)
Q Consensus 252 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~La~~~ 330 (609)
..|+|++|..++++++.......+......++..+|.+|...|++++|..++++++.+.....++ ...+..+..+|.++
T Consensus 147 ~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~ 226 (434)
T 4b4t_Q 147 QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILH 226 (434)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH
Confidence 99999999999999999998888888889999999999999999999999999999999887664 45678889999999
Q ss_pred HHcCChHHHHHHHHHHHHHHHHcCCCchHHHHH
Q psy10738 331 AARGNHEKALYFATKHLEISKQLGDPLGQVTAQ 363 (609)
Q Consensus 331 ~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~ 363 (609)
...|++++|..+|.++++.....+.......+.
T Consensus 227 ~~~~~y~~A~~~~~~a~~~~~~~~~~~~~~~~~ 259 (434)
T 4b4t_Q 227 CEDKDYKTAFSYFFESFESYHNLTTHNSYEKAC 259 (434)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHTTTSSCHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Confidence 999999999999999999999888766554443
No 82
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.71 E-value=1.6e-16 Score=152.00 Aligned_cols=204 Identities=12% Similarity=0.130 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCC-cchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGT-DDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
..+...|..++..|++++|+..|+++++..| .+. .+++.+|.++...|++++|+.++++++.. .+....
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~ 77 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS----VTAYNCGVCADNIKKYKEAADYFDIAIKK------NYNLAN 77 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHT------TCSHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc----HHHHHHHHHHHHhhcHHHHHHHHHHHHHh------CcchHH
Confidence 4566789999999999999999999999998 664 37778999999999999999999999988 777899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLND-KLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAI 180 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d-~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~ 180 (609)
++..+|.+|..+|++++|+.++++++.+.+.... ....+.++..+|.++...|+ +++|+
T Consensus 78 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~--------------------~~~A~ 137 (228)
T 4i17_A 78 AYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGN--------------------IEKAE 137 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTC--------------------HHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhcc--------------------HHHHH
Confidence 9999999999999999999999999998763221 12345789999999999999 99999
Q ss_pred HHHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 181 KYYEQNLALMKEINDTAA--QGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 181 ~~~~~al~~~~~~~~~~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 258 (609)
.+|++++++ .+. ...++.++|.+|...|+. .++++..+... . .....+......+.+++
T Consensus 138 ~~~~~al~~------~p~~~~~~~~~~l~~~~~~~~~~-----~~~~a~~~~~~--~------~~~~~~~~~~~~~~~~~ 198 (228)
T 4i17_A 138 ENYKHATDV------TSKKWKTDALYSLGVLFYNNGAD-----VLRKATPLASS--N------KEKYASEKAKADAAFKK 198 (228)
T ss_dssp HHHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHH-----HHHHHGGGTTT--C------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc------CCCcccHHHHHHHHHHHHHHHHH-----HHHHHHhcccC--C------HHHHHHHHHHHHHHHHH
Confidence 999999987 455 678999999999876643 33333332211 1 11123344555677899
Q ss_pred HHHHHHHHHHHHHHcCC
Q psy10738 259 ASEHYKRTLVLAQDLGD 275 (609)
Q Consensus 259 A~~~~~~al~~~~~~~~ 275 (609)
|+.++++++++.+...+
T Consensus 199 A~~~~~~a~~l~p~~~~ 215 (228)
T 4i17_A 199 AVDYLGEAVTLSPNRTE 215 (228)
T ss_dssp HHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHhhcCCCCHH
Confidence 99999999998876544
No 83
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.69 E-value=2.6e-16 Score=150.60 Aligned_cols=215 Identities=14% Similarity=0.076 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKL-GEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
..++.+|.+++..|++++|+.+|++++.+ .+ ....+++++|.++...|++++|+.++++++.+.+ ..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------~~ 75 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKL------TNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNY------NL 75 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC------SH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc------cCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCc------ch
Confidence 58899999999999999999999999998 43 4557888899999999999999999999998765 56
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHcCCHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEIND-TAAQGRACGNLGNTYYLLGNFKQ 218 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~~~~~g~~~~ 218 (609)
..++..+|.+|...|+ +++|+.++++++++.+.... ....+.++.++|.++...|++++
T Consensus 76 ~~~~~~l~~~~~~~~~--------------------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 135 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKN--------------------NQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEK 135 (228)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHccc--------------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHH
Confidence 7899999999999999 99999999999987432210 12235789999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPT 298 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 298 (609)
|+.+|++++++.+. .....++.++|.+|...|+. .++++..+.... .....+......+.+++
T Consensus 136 A~~~~~~al~~~p~----~~~~~~~~~l~~~~~~~~~~-----~~~~a~~~~~~~--------~~~~~~~~~~~~~~~~~ 198 (228)
T 4i17_A 136 AEENYKHATDVTSK----KWKTDALYSLGVLFYNNGAD-----VLRKATPLASSN--------KEKYASEKAKADAAFKK 198 (228)
T ss_dssp HHHHHHHHTTSSCH----HHHHHHHHHHHHHHHHHHHH-----HHHHHGGGTTTC--------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC----cccHHHHHHHHHHHHHHHHH-----HHHHHHhcccCC--------HHHHHHHHHHHHHHHHH
Confidence 99999999987443 01245899999999876643 333333332111 11123344556778999
Q ss_pred HHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Q psy10738 299 AIDYHLRHLIIAQQLMDRVGEGRACWSLGNAH 330 (609)
Q Consensus 299 A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~ 330 (609)
|+.++++++++.++... +...++.+.
T Consensus 199 A~~~~~~a~~l~p~~~~------~~~~l~~i~ 224 (228)
T 4i17_A 199 AVDYLGEAVTLSPNRTE------IKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHHHHCTTCHH------HHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCHH------HHHHHHHHH
Confidence 99999999999988855 444455443
No 84
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.67 E-value=1.4e-16 Score=169.18 Aligned_cols=274 Identities=14% Similarity=0.074 Sum_probs=178.3
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 28 EGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDY---QKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 28 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~---~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
.|..++..|++++|+.+|+++.+.+. +. +++.+|.+|...|++ ++|+.+|+++++. .+.+++
T Consensus 9 la~~~~~~g~~~~A~~~~~~aa~~g~--~~----A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~---------~~~A~~ 73 (452)
T 3e4b_A 9 LANEALKRGDTVTAQQNYQQLAELGY--SE----AQVGLADIQVGTRDPAQIKQAEATYRAAADT---------SPRAQA 73 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC--CT----GGGTCC-------------------------------------CHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHCCC--HH----HHHHHHHHHHccCCCCCHHHHHHHHHHHHhC---------CHHHHH
Confidence 48889999999999999999988753 22 678899999999988 9999999999854 456789
Q ss_pred HHHHHHHHcC-----CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHh----
Q psy10738 105 NLGNTLKVMG-----KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVC---- 175 (609)
Q Consensus 105 ~lg~~~~~~g-----~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~---- 175 (609)
++|.++...| ++++|+.+|+++++. ++ ..++++||.+|...+..... .+....
T Consensus 74 ~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~----g~----~~A~~~Lg~~y~~~~~~~~~----------~~a~~~~~~a 135 (452)
T 3e4b_A 74 RLGRLLAAKPGATEAEHHEAESLLKKAFAN----GE----GNTLIPLAMLYLQYPHSFPN----------VNAQQQISQW 135 (452)
T ss_dssp HHHHHHHTC--CCHHHHHHHHHHHHHHHHT----TC----SSCHHHHHHHHHHCGGGCTT----------CCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHH
Confidence 9999777766 889999999999872 11 22666667666665541100 000000
Q ss_pred ---------------------HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHH
Q psy10738 176 ---------------------LQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG---NFKQAIYYHQERLKIAR 231 (609)
Q Consensus 176 ---------------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~ 231 (609)
++++............ .++ ..+++++|.+|...| ++++|+.+|+++.+..+
T Consensus 136 ~~~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~-~~~----~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~ 210 (452)
T 3e4b_A 136 QAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKAAL-NTT----DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGT 210 (452)
T ss_dssp HHHTCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHT-TTC----TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC
T ss_pred HHCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHH-cCC----HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCC
Confidence 1111111111111110 112 128899999999999 99999999999876432
Q ss_pred HhCChHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH-H--HHhCCHHHHHHHHH
Q psy10738 232 EFGDKAAERRANSNLGNSHIFL----GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNT-Y--TLLRDYPTAIDYHL 304 (609)
Q Consensus 232 ~~~~~~~~~~~~~~la~~~~~~----g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~-~--~~~g~~~~A~~~~~ 304 (609)
. .+..++++|.+|... +++++|+.+|+++. +. .+.+++.+|.+ + ...+++++|+.+|+
T Consensus 211 ~------~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g------~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~ 275 (452)
T 3e4b_A 211 V------TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PG------YPASWVSLAQLLYDFPELGDVEQMMKYLD 275 (452)
T ss_dssp S------CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GG------STHHHHHHHHHHHHSGGGCCHHHHHHHHH
T ss_pred H------HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CC------CHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 1 122558899999765 79999999999987 32 26788999998 4 57899999999999
Q ss_pred HHHHHHHHhcchhhHHHHHHHHHHHHHHcC-----ChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q psy10738 305 RHLIIAQQLMDRVGEGRACWSLGNAHAARG-----NHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKA 372 (609)
Q Consensus 305 ~al~~~~~~~~~~~~~~~~~~La~~~~~~g-----~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~ 372 (609)
++.+. + ...+++.||.+|. .| ++++|+.+|+++. .+...+..+||.+|..
T Consensus 276 ~Aa~~----g----~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---------~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 276 NGRAA----D----QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---------GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHT----T----CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---------TTCHHHHHHHHHHHHT
T ss_pred HHHHC----C----CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---------CCCHHHHHHHHHHHHC
Confidence 98743 2 4568999999998 66 9999999999987 2456899999988876
No 85
>4g5s_E PINS homolog, G-protein-signaling modulator 2; galpha, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 3.62A {Mus musculus}
Probab=99.67 E-value=1.2e-17 Score=89.56 Aligned_cols=24 Identities=54% Similarity=1.158 Sum_probs=20.7
Q ss_pred CchHHHHHHHhhhcchhhhcccCC
Q psy10738 536 DDGFLDMLIRCQGARLEDQRSHLP 559 (609)
Q Consensus 536 ~~~~~~~~~~~q~~r~~~qr~~~~ 559 (609)
||+||+||+||||||+|||||++|
T Consensus 1 dd~ff~ml~kcq~srlddqrcapp 24 (26)
T 4g5s_E 1 DEDFFDILVKCQGSRLDDQRCAPP 24 (26)
T ss_dssp --CHHHHHHHHSCCCCSSSCBCCC
T ss_pred ChhHHHHHHHhcccccccccCCCC
Confidence 689999999999999999999988
No 86
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.66 E-value=3.2e-15 Score=146.25 Aligned_cols=209 Identities=13% Similarity=0.099 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
...++..|..++..|+|++|+..|+++++..|.++. ...+++.+|.+|+..|++++|+..|++++...+. .+....
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~-~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~---~~~~~~ 90 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW-AADAQFYLARAYYQNKEYLLAASEYERFIQIYQI---DPRVPQ 90 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTTHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc-hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC---CchhHH
Confidence 346677899999999999999999999999997743 3568999999999999999999999999988332 345678
Q ss_pred HHHHHHHHHHH--------cCCHHHHHHHHHHHHHHHHHcCCcHH-----------HHHHHHHHHHHHHHcccccccCCC
Q psy10738 102 SSGNLGNTLKV--------MGKYDEAMVCCKRHLEISRQLNDKLS-----------EGRALYNLGNVYHAKGKAIGKVGQ 162 (609)
Q Consensus 102 a~~~lg~~~~~--------~g~~~~A~~~~~~al~l~~~~~d~~~-----------~~~~~~~lg~~~~~~g~~~~~~~~ 162 (609)
+++.+|.++.. .|++++|+..|++++...+....... ....++.+|.+|...|+
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~------- 163 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERREL------- 163 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-------
Confidence 99999999999 99999999999999998764432211 11223899999999999
Q ss_pred CCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHHHHHH
Q psy10738 163 QDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLL----------GNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 163 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~----------g~~~~A~~~~~~al~~~~~ 232 (609)
+++|+..|+++++..+ +.+....++..+|.+|..+ |++++|+.+|+++++..+.
T Consensus 164 -------------~~~A~~~~~~~l~~~p---~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 227 (261)
T 3qky_A 164 -------------YEAAAVTYEAVFDAYP---DTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPD 227 (261)
T ss_dssp -------------HHHHHHHHHHHHHHCT---TSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred -------------HHHHHHHHHHHHHHCC---CCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCC
Confidence 9999999999988643 2333567899999999977 9999999999999987654
Q ss_pred hCChHHHHHHHHHHHHHHHHhCCHHHHH
Q psy10738 233 FGDKAAERRANSNLGNSHIFLGEYQAAS 260 (609)
Q Consensus 233 ~~~~~~~~~~~~~la~~~~~~g~~~~A~ 260 (609)
. .....+...++.++...++++.+.
T Consensus 228 ~---~~~~~a~~~l~~~~~~~~~~~~~~ 252 (261)
T 3qky_A 228 S---PLLRTAEELYTRARQRLTELEGDA 252 (261)
T ss_dssp C---THHHHHHHHHHHHHHHHHHHHTCT
T ss_pred C---hHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3 334446777788877777765543
No 87
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.65 E-value=1.3e-15 Score=153.02 Aligned_cols=225 Identities=9% Similarity=0.005 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH-------hCCH-------HHHHHHHHHHHH-HHHHcCChhhHHHHH
Q psy10738 39 RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY-------LGDY-------QKAMQYHKQDLT-LARNMEDKLGEAKSS 103 (609)
Q Consensus 39 ~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~-------~g~~-------~~A~~~~~~al~-~~~~~~d~~~~~~a~ 103 (609)
++|+..|++++...|.++. +|+.+|..+.. .|++ ++|+..|++++. + .+....+|
T Consensus 33 ~~a~~~~~~al~~~p~~~~----~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~------~p~~~~~~ 102 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPD----IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL------LKKNMLLY 102 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHH----HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT------TTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCCHH----HHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh------CcccHHHH
Confidence 7899999999999998855 78888888764 4775 889999999988 6 56677889
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEG-RALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKY 182 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~-~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 182 (609)
..+|.++...|++++|...|++++++.+. .. .++.++|.++...|+ +++|+..
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~--------------------~~~A~~~ 156 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAIEDI------DPTLVYIQYMKFARRAEG--------------------IKSGRMI 156 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSSSS------CTHHHHHHHHHHHHHHHC--------------------HHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhcccc------CccHHHHHHHHHHHHhcC--------------------HHHHHHH
Confidence 99999999999999999999999886431 12 278888999999998 9999999
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHH
Q psy10738 183 YEQNLALMKEINDTAAQGRACGNLGNTYYL-LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASE 261 (609)
Q Consensus 183 ~~~al~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 261 (609)
|+++++..+ ....++...+.+... .|++++|+.+|+++++..+... .++..+|.++...|++++|+.
T Consensus 157 ~~~a~~~~p------~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~~~~~~~~~g~~~~A~~ 224 (308)
T 2ond_A 157 FKKAREDAR------TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIP------EYVLAYIDYLSHLNEDNNTRV 224 (308)
T ss_dssp HHHHHTSTT------CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHhcCC------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHCCCHHHHHH
Confidence 999887532 123344444444333 6889999999999888766432 377888888888899999999
Q ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q psy10738 262 HYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 313 (609)
Q Consensus 262 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 313 (609)
+|++++.... -++.....++..++..+...|++++|...+.++++..++.
T Consensus 225 ~~~~al~~~~--l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~~ 274 (308)
T 2ond_A 225 LFERVLTSGS--LPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREE 274 (308)
T ss_dssp HHHHHHHSSS--SCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHhccC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccc
Confidence 8888887410 0111124567777888888888888888888888877653
No 88
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.65 E-value=2.6e-15 Score=146.90 Aligned_cols=208 Identities=15% Similarity=0.080 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
+..++.+|..++..|++++|+..|++++... .+.+....+++.+|.+|...|++++|+..|++++.+.+.. ...
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~---p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~ 88 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYG---RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQID---PRV 88 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC---SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---TTH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC---chh
Confidence 4588999999999999999999999998862 2233348899999999999999999999999999986633 345
Q ss_pred HHHHHHHHHHHHH--------cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHH-----------HH
Q psy10738 140 GRALYNLGNVYHA--------KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAA-----------QG 200 (609)
Q Consensus 140 ~~~~~~lg~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~-----------~~ 200 (609)
..+++.+|.++.. .|+ +++|+..|++++...+....... ..
T Consensus 89 ~~a~~~lg~~~~~~~~~~~~~~~~--------------------~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~ 148 (261)
T 3qky_A 89 PQAEYERAMCYYKLSPPYELDQTD--------------------TRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLA 148 (261)
T ss_dssp HHHHHHHHHHHHHHCCCTTSCCHH--------------------HHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccchh--------------------HHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHH
Confidence 6789999999999 898 99999999999987543322110 11
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh----------CCHHHHHHHHHHHHHHH
Q psy10738 201 RACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFL----------GEYQAASEHYKRTLVLA 270 (609)
Q Consensus 201 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~----------g~~~~A~~~~~~al~~~ 270 (609)
..+..+|.+|...|++++|+.+|+++++..+... ....+++.+|.+|..+ |++++|+.+|++++...
T Consensus 149 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~---~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~ 225 (261)
T 3qky_A 149 RKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP---WADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF 225 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST---THHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc---hHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC
Confidence 2237888888888888888888888887655432 2334778888888866 78888888888887766
Q ss_pred HHcCCcHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 271 QDLGDRAVEAQACYSLGNTYTLLRDYPTA 299 (609)
Q Consensus 271 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A 299 (609)
+.. .....+...++.++...++++++
T Consensus 226 p~~---~~~~~a~~~l~~~~~~~~~~~~~ 251 (261)
T 3qky_A 226 PDS---PLLRTAEELYTRARQRLTELEGD 251 (261)
T ss_dssp TTC---THHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCC---hHHHHHHHHHHHHHHHHHHhhhh
Confidence 532 33455666677777666666544
No 89
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.64 E-value=2.6e-15 Score=141.71 Aligned_cols=168 Identities=17% Similarity=0.135 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHH----------------HHHHHHHhCCHHHHHHHHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQ----------------LGNAYFYLGDYQKAMQYHKQD 86 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~----------------lg~~~~~~g~~~~A~~~~~~a 86 (609)
-.++.+|..++..|++++|+..|+++++.+|+++. +++. +|.+|...|++++|+.+|+++
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 80 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTE----MYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKEL 80 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHH----HHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChH----HHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 35667899999999999999999999999998754 5666 888888888888888888888
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCC
Q psy10738 87 LTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPG 166 (609)
Q Consensus 87 l~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~ 166 (609)
+++ .|....++..+|.++...|++++|+.+|++++++.+ ....+++++|.+|+..|+.
T Consensus 81 l~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P------~~~~a~~~lg~~~~~~~~~---------- 138 (208)
T 3urz_A 81 LQK------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEA------DNLAANIFLGNYYYLTAEQ---------- 138 (208)
T ss_dssp HHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHHHH----------
T ss_pred HHH------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHhHH----------
Confidence 887 677778888888888888888888888888888766 4456788888888776650
Q ss_pred CCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 167 EYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAR 231 (609)
Q Consensus 167 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 231 (609)
....+...+.+++. +.....+++++|.++...|++++|+.+|++++++.+
T Consensus 139 --------~~~~~~~~~~~~~~-------~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 139 --------EKKKLETDYKKLSS-------PTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp --------HHHHHHHHHC---C-------CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred --------HHHHHHHHHHHHhC-------CCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 03444555544432 222234566778888888888888888888877654
No 90
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.63 E-value=4e-15 Score=136.11 Aligned_cols=172 Identities=18% Similarity=0.133 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcH
Q psy10738 58 TLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKL 137 (609)
Q Consensus 58 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~ 137 (609)
....++..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++...+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~------ 73 (186)
T 3as5_A 6 IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDA------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAP------ 73 (186)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC------
Confidence 34667888999999999999999999888776 455678888999999999999999999999888754
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFK 217 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 217 (609)
....++..+|.++...|+ +++|+.++++++... +....++..+|.++...|+++
T Consensus 74 ~~~~~~~~~a~~~~~~~~--------------------~~~A~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~~ 127 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQK--------------------YDLAVPLLIKVAEAN------PINFNVRFRLGVALDNLGRFD 127 (186)
T ss_dssp TCHHHHHHHHHHHHHHTC--------------------HHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHhcC--------------------HHHHHHHHHHHHhcC------cHhHHHHHHHHHHHHHcCcHH
Confidence 345678889999999999 999999999888762 233567888999999999999
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Q psy10738 218 QAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 218 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 273 (609)
+|+.++++++...+.. ..++..+|.++...|++++|+.++++++.+.+..
T Consensus 128 ~A~~~~~~~~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 177 (186)
T 3as5_A 128 EAIDSFKIALGLRPNE------GKVHRAIAFSYEQMGRHEEALPHFKKANELDEGA 177 (186)
T ss_dssp HHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCccc------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 9999999988775432 2478889999999999999999999988877643
No 91
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.62 E-value=1.8e-14 Score=131.76 Aligned_cols=168 Identities=20% Similarity=0.256 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|..+...|++++|+..|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+....++
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~ 79 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDADAFDV----DVALHLGIAYVKTGAVDRGTELLERSLAD------APDNVKVA 79 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCccCh----HHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHH
Confidence 445679999999999999999999999988774 48899999999999999999999999988 56678899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYY 183 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 183 (609)
..+|.++...|++++|+.++++++...+ ....++..+|.++...|+ +++|+.++
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~--------------------~~~A~~~~ 133 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEANP------INFNVRFRLGVALDNLGR--------------------FDEAIDSF 133 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCc------HhHHHHHHHHHHHHHcCc--------------------HHHHHHHH
Confidence 9999999999999999999999998755 345688999999999999 99999999
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q psy10738 184 EQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREF 233 (609)
Q Consensus 184 ~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 233 (609)
++++... +....++..+|.++...|++++|+.++++++.+.+..
T Consensus 134 ~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 177 (186)
T 3as5_A 134 KIALGLR------PNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGA 177 (186)
T ss_dssp HHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhcC------ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 9998873 2335788999999999999999999999999987654
No 92
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.61 E-value=1.5e-14 Score=145.31 Aligned_cols=225 Identities=11% Similarity=0.033 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH-------cCCH-------HHHHHHHHHHHH-HHHHcCCcHHHHH
Q psy10738 77 QKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKV-------MGKY-------DEAMVCCKRHLE-ISRQLNDKLSEGR 141 (609)
Q Consensus 77 ~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~-------~g~~-------~~A~~~~~~al~-l~~~~~d~~~~~~ 141 (609)
++|+..|++++.. .+..+.+|+.+|..+.. .|++ ++|+..|++++. +.+ ....
T Consensus 33 ~~a~~~~~~al~~------~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p------~~~~ 100 (308)
T 2ond_A 33 KRVMFAYEQCLLV------LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLK------KNML 100 (308)
T ss_dssp HHHHHHHHHHHHH------HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTT------TCHH
T ss_pred HHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCc------ccHH
Confidence 7899999999998 78889999999998874 5885 899999999998 554 4456
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHH-HHHHHHHHHHHHcCCHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQG-RACGNLGNTYYLLGNFKQAI 220 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~lg~~~~~~g~~~~A~ 220 (609)
++..+|.++...|+ +++|...|++++++. +... .++.++|.++...|++++|+
T Consensus 101 ~~~~~~~~~~~~~~--------------------~~~A~~~~~~al~~~------p~~~~~~~~~~~~~~~~~~~~~~A~ 154 (308)
T 2ond_A 101 LYFAYADYEESRMK--------------------YEKVHSIYNRLLAIE------DIDPTLVYIQYMKFARRAEGIKSGR 154 (308)
T ss_dssp HHHHHHHHHHHTTC--------------------HHHHHHHHHHHHTSS------SSCTHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhcCC--------------------HHHHHHHHHHHHhcc------ccCccHHHHHHHHHHHHhcCHHHHH
Confidence 89999999999999 999999999999852 2222 28899999999999999999
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 221 YYHQERLKIAREFGDKAAERRANSNLGNSHIF-LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 299 (609)
Q Consensus 221 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 299 (609)
..|+++++..+.. ..++...+.+... .|++++|+..|+++++..+.. ..++..+|.++...|++++|
T Consensus 155 ~~~~~a~~~~p~~------~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~g~~~~A 222 (308)
T 2ond_A 155 MIFKKAREDARTR------HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDI------PEYVLAYIDYLSHLNEDNNT 222 (308)
T ss_dssp HHHHHHHTSTTCC------THHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHhcCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHCCCHHHH
Confidence 9999999865432 1244444444333 799999999999999988753 67889999999999999999
Q ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHc
Q psy10738 300 IDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQL 353 (609)
Q Consensus 300 ~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~ 353 (609)
+..|++++.... -.+.....++..++.++...|++++|...++++++.....
T Consensus 223 ~~~~~~al~~~~--l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~~ 274 (308)
T 2ond_A 223 RVLFERVLTSGS--LPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREE 274 (308)
T ss_dssp HHHHHHHHHSSS--SCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccc
Confidence 999999987410 0111235578888999999999999999999999987543
No 93
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.60 E-value=1.4e-13 Score=156.36 Aligned_cols=296 Identities=15% Similarity=0.101 Sum_probs=191.8
Q ss_pred hhhhHhhhcCCCcchhHHHHHHHH----HHHHH-hcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 5 NISSSDSQSGGADGGNMCLELALE----GERLC-KAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKA 79 (609)
Q Consensus 5 ~Lg~~~~~~g~~~~a~~~~~l~~~----g~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A 79 (609)
.+|.++...|.+++|..+|+.+.. ...++ ..|++++|+++++++ +. ..+|+.+|.++...|++++|
T Consensus 1054 eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aerv-----n~----p~vWsqLAKAql~~G~~kEA 1124 (1630)
T 1xi4_A 1054 DIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERC-----NE----PAVWSQLAKAQLQKGMVKEA 1124 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhc-----CC----HHHHHHHHHHHHhCCCHHHH
Confidence 357788888888888877765432 12333 667777777777655 22 45899999999999999999
Q ss_pred HHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHccccccc
Q psy10738 80 MQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGK 159 (609)
Q Consensus 80 ~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~ 159 (609)
+..|.++ .....+..+|.++...|+|++|+++|..+.+..+.. .+...+|.+|...++
T Consensus 1125 IdsYiKA-----------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~-------~Idt~LafaYAKl~r---- 1182 (1630)
T 1xi4_A 1125 IDSYIKA-----------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES-------YVETELIFALAKTNR---- 1182 (1630)
T ss_pred HHHHHhc-----------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc-------cccHHHHHHHHhhcC----
Confidence 9999775 335678889999999999999999999988765321 122237777777776
Q ss_pred CCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Q psy10738 160 VGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAE 239 (609)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 239 (609)
+++ ++.|.+ .+. ...+..+|..+...|+|++|+.+|.++
T Consensus 1183 ----------------lee-le~fI~----------~~n-~ad~~~iGd~le~eg~YeeA~~~Y~kA------------- 1221 (1630)
T 1xi4_A 1183 ----------------LAE-LEEFIN----------GPN-NAHIQQVGDRCYDEKMYDAAKLLYNNV------------- 1221 (1630)
T ss_pred ----------------HHH-HHHHHh----------CCC-HHHHHHHHHHHHhcCCHHHHHHHHHhh-------------
Confidence 653 333311 011 124456777777777777777777774
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH------------------cC-CcHHHHHHHHHHHHHHHHhCCHHHHH
Q psy10738 240 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD------------------LG-DRAVEAQACYSLGNTYTLLRDYPTAI 300 (609)
Q Consensus 240 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~------------------~~-~~~~~~~~~~~la~~~~~~g~~~~A~ 300 (609)
..|..+|.+|.++|++++|++.+++|.....- .+ .....+..+..++..|...|.|++|+
T Consensus 1222 -~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI 1300 (1630)
T 1xi4_A 1222 -SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELI 1300 (1630)
T ss_pred -hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHH
Confidence 15666777777777777777777766432210 00 00001234456777788888888888
Q ss_pred HHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCC
Q psy10738 301 DYHLRHLIIAQQLMDRVGEGRACWSLGNAHAAR--GNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTN 378 (609)
Q Consensus 301 ~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~--g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~ 378 (609)
.+++.++.+.+. ....+..||.+|.+- ++..+++++|...+.+-+-+. .-.....+..+.-+|..-|++++
T Consensus 1301 ~LlE~aL~Lera------H~gmftELaiLyaKy~peklmEhlk~f~~rini~k~~r-~~e~~~lW~elv~LY~~~~e~dn 1373 (1630)
T 1xi4_A 1301 TMLEAALGLERA------HMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR-AAEQAHLWAELVFLYDKYEEYDN 1373 (1630)
T ss_pred HHHHHHhccChh------HhHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccchHhH-HHHHHHHHHHHHHHHHhcccHHH
Confidence 888887766433 333555566666543 344455555554444321111 11456667788888888888777
Q ss_pred CC
Q psy10738 379 DL 380 (609)
Q Consensus 379 al 380 (609)
|+
T Consensus 1374 A~ 1375 (1630)
T 1xi4_A 1374 AI 1375 (1630)
T ss_pred HH
Confidence 65
No 94
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.60 E-value=1.6e-15 Score=169.33 Aligned_cols=192 Identities=15% Similarity=0.026 Sum_probs=161.5
Q ss_pred HhcCChHHHHHHHHHHH--------HhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 33 CKAGDCRAGVAFFQAAI--------QAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 33 ~~~g~~~~A~~~~~~al--------~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
...|++++|+..|++++ +.+|++.. +++.+|.++...|++++|+..++++++. .+....+++
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~----~~~~~a~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~ 471 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVE----LPLMEVRALLDLGDVAKATRKLDDLAER------VGWRWRLVW 471 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSH----HHHHHHHHHHHHTCHHHHHHHHHHHHHH------HCCCHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchh----HHHHHHHHHHhcCCHHHHHHHHHHHhcc------CcchHHHHH
Confidence 78899999999999999 77787744 8899999999999999999999999998 777889999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYE 184 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 184 (609)
++|.++...|++++|+..|++++++.+ ....+++++|.+|...|+ +++ +.+|+
T Consensus 472 ~lg~~~~~~g~~~~A~~~~~~al~l~P------~~~~~~~~lg~~~~~~g~--------------------~~~-~~~~~ 524 (681)
T 2pzi_A 472 YRAVAELLTGDYDSATKHFTEVLDTFP------GELAPKLALAATAELAGN--------------------TDE-HKFYQ 524 (681)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHST------TCSHHHHHHHHHHHHHTC--------------------CCT-TCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHcCC--------------------hHH-HHHHH
Confidence 999999999999999999999999887 446788999999999999 889 99999
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHH-HHHH
Q psy10738 185 QNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAA-SEHY 263 (609)
Q Consensus 185 ~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~ 263 (609)
+++++ .+....+++++|.++..+|++++|+.+|++++++.+... .++.++|.++...++.+++ ...+
T Consensus 525 ~al~~------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~------~a~~~~~~~~~~~~~~~~~~~~~~ 592 (681)
T 2pzi_A 525 TVWST------NDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT------TARLTSAVTLLSGRSTSEVTEEQI 592 (681)
T ss_dssp HHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH------HHHHHHHHHTC-------CCHHHH
T ss_pred HHHHh------CCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH------HHHHHHHHHHHccCCCCCCCHHHH
Confidence 99987 455567999999999999999999999999988755433 3889999999887775555 6667
Q ss_pred HHHHHHHHHc
Q psy10738 264 KRTLVLAQDL 273 (609)
Q Consensus 264 ~~al~~~~~~ 273 (609)
.+++......
T Consensus 593 ~~A~~~l~~~ 602 (681)
T 2pzi_A 593 RDAARRVEAL 602 (681)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHhhC
Confidence 7777666554
No 95
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.59 E-value=6.9e-15 Score=164.17 Aligned_cols=198 Identities=13% Similarity=-0.036 Sum_probs=162.5
Q ss_pred HHhCCHHHHHHHHHHHHHHH--HHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q psy10738 71 FYLGDYQKAMQYHKQDLTLA--RNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGN 148 (609)
Q Consensus 71 ~~~g~~~~A~~~~~~al~~~--~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~ 148 (609)
...|++++|+..+++++... ......+....++..+|.++...|++++|+..|++++++.+ ....+++++|.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p------~~~~a~~~lg~ 475 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVG------WRWRLVWYRAV 475 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC------CCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCc------chHHHHHHHHH
Confidence 67899999999999998111 01112567788999999999999999999999999999877 45779999999
Q ss_pred HHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy10738 149 VYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLK 228 (609)
Q Consensus 149 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 228 (609)
+|...|+ +++|+..|++++++ .+....++.++|.++..+|++++ +.+|+++++
T Consensus 476 ~~~~~g~--------------------~~~A~~~~~~al~l------~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~ 528 (681)
T 2pzi_A 476 AELLTGD--------------------YDSATKHFTEVLDT------FPGELAPKLALAATAELAGNTDE-HKFYQTVWS 528 (681)
T ss_dssp HHHHHTC--------------------HHHHHHHHHHHHHH------STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHH
T ss_pred HHHHcCC--------------------HHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHH
Confidence 9999999 99999999999998 44456789999999999999999 999999999
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHH
Q psy10738 229 IAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA-IDYHLRHL 307 (609)
Q Consensus 229 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al 307 (609)
+.+.... +++++|.++..+|++++|+.+|++++++.+. ...+++++|.++...++.++| ...+.+|+
T Consensus 529 ~~P~~~~------a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~------~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~ 596 (681)
T 2pzi_A 529 TNDGVIS------AAFGLARARSAEGDRVGAVRTLDEVPPTSRH------FTTARLTSAVTLLSGRSTSEVTEEQIRDAA 596 (681)
T ss_dssp HCTTCHH------HHHHHHHHHHHTTCHHHHHHHHHTSCTTSTT------HHHHHHHHHHHTC-------CCHHHHHHHH
T ss_pred hCCchHH------HHHHHHHHHHHcCCHHHHHHHHHhhcccCcc------cHHHHHHHHHHHHccCCCCCCCHHHHHHHH
Confidence 8665433 8999999999999999999999999987765 377899999999887776665 66777777
Q ss_pred HHHHHh
Q psy10738 308 IIAQQL 313 (609)
Q Consensus 308 ~~~~~~ 313 (609)
......
T Consensus 597 ~~l~~~ 602 (681)
T 2pzi_A 597 RRVEAL 602 (681)
T ss_dssp HHHHTS
T ss_pred HHHhhC
Confidence 766655
No 96
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.59 E-value=1.9e-14 Score=135.67 Aligned_cols=166 Identities=22% Similarity=0.232 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHH----------------HHHHHHHcCCHHHHHHHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGN----------------LGNTLKVMGKYDEAMVCCK 124 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~----------------lg~~~~~~g~~~~A~~~~~ 124 (609)
..+...|..++..|++++|+.+|++++.. .|....+++. +|.+|...|++++|+.+|+
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIAL------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 35677889999999999999999999988 6777777777 6666666666666666666
Q ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Q psy10738 125 RHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACG 204 (609)
Q Consensus 125 ~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 204 (609)
+++++.+ ....++.++|.+|...|+ +++|+.+|++++++ .+....++.
T Consensus 79 ~al~~~p------~~~~~~~~lg~~~~~~g~--------------------~~~A~~~~~~al~~------~P~~~~a~~ 126 (208)
T 3urz_A 79 ELLQKAP------NNVDCLEACAEMQVCRGQ--------------------EKDALRMYEKILQL------EADNLAANI 126 (208)
T ss_dssp HHHHHCT------TCHHHHHHHHHHHHHHTC--------------------HHHHHHHHHHHHHH------CTTCHHHHH
T ss_pred HHHHHCC------CCHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHc------CCCCHHHHH
Confidence 6666544 334556666666666666 66666666666655 333345566
Q ss_pred HHHHHHHHcCCH--HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q psy10738 205 NLGNTYYLLGNF--KQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ 271 (609)
Q Consensus 205 ~lg~~~~~~g~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 271 (609)
++|.+|+..|+. ..+...+.+++. ..+ ...+++++|.++...|++++|+.+|++++++.|
T Consensus 127 ~lg~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 127 FLGNYYYLTAEQEKKKLETDYKKLSS-----PTK--MQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---C-----CCH--HHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhC-----CCc--hhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 666666554432 233333333321 111 112445556666666666666666666665544
No 97
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.55 E-value=8.4e-13 Score=150.05 Aligned_cols=236 Identities=14% Similarity=0.074 Sum_probs=177.8
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q psy10738 29 GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGN 108 (609)
Q Consensus 29 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~ 108 (609)
|.++...|.|++|..+|+++- .. ...+...+...|++++|+++++++ ....+|+.+|.
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~-----~~------~~A~~VLie~i~nldrAiE~Aerv-----------n~p~vWsqLAK 1113 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFD-----VN------TSAVQVLIEHIGNLDRAYEFAERC-----------NEPAVWSQLAK 1113 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcC-----CH------HHHHHHHHHHHhhHHHHHHHHHhc-----------CCHHHHHHHHH
Confidence 888999999999999999972 11 111233344677788887777644 23678999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHH
Q psy10738 109 TLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLA 188 (609)
Q Consensus 109 ~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 188 (609)
++...|++++|+.+|.++ .....|..+|.++...|+ |++|+++|..+.+
T Consensus 1114 Aql~~G~~kEAIdsYiKA-----------dD~say~eVa~~~~~lGk--------------------yEEAIeyL~mArk 1162 (1630)
T 1xi4_A 1114 AQLQKGMVKEAIDSYIKA-----------DDPSSYMEVVQAANTSGN--------------------WEELVKYLQMARK 1162 (1630)
T ss_pred HHHhCCCHHHHHHHHHhc-----------CChHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHh
Confidence 999999999999999876 224578889999999999 9999999999887
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy10738 189 LMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLV 268 (609)
Q Consensus 189 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 268 (609)
..+.. .+...+|.+|.+++++++ ++.|.+ ..+ ...+..+|..+...|+|++|..+|.++
T Consensus 1163 ~~~e~-------~Idt~LafaYAKl~rlee-le~fI~-------~~n----~ad~~~iGd~le~eg~YeeA~~~Y~kA-- 1221 (1630)
T 1xi4_A 1163 KARES-------YVETELIFALAKTNRLAE-LEEFIN-------GPN----NAHIQQVGDRCYDEKMYDAAKLLYNNV-- 1221 (1630)
T ss_pred hcccc-------cccHHHHHHHHhhcCHHH-HHHHHh-------CCC----HHHHHHHHHHHHhcCCHHHHHHHHHhh--
Confidence 64221 122348999999999885 444421 111 125668999999999999999999985
Q ss_pred HHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH------------------Hhcc-hhhHHHHHHHHHHH
Q psy10738 269 LAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ------------------QLMD-RVGEGRACWSLGNA 329 (609)
Q Consensus 269 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~------------------~~~~-~~~~~~~~~~La~~ 329 (609)
..|..+|.+|.++|++++|++.+++|..... ..+. ....+..+..++..
T Consensus 1222 ------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~y 1289 (1630)
T 1xi4_A 1222 ------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINY 1289 (1630)
T ss_pred ------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHH
Confidence 3677899999999999999999998854422 0000 00123355688889
Q ss_pred HHHcCChHHHHHHHHHHHHHH
Q psy10738 330 HAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 330 ~~~~g~~~~A~~~~~~al~l~ 350 (609)
|...|.+++|+.++++++.+-
T Consensus 1290 Ye~~G~feEAI~LlE~aL~Le 1310 (1630)
T 1xi4_A 1290 YQDRGYFEELITMLEAALGLE 1310 (1630)
T ss_pred HHHcCCHHHHHHHHHHHhccC
Confidence 999999999999999997653
No 98
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=3.6e-15 Score=132.87 Aligned_cols=147 Identities=12% Similarity=0.057 Sum_probs=108.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Q psy10738 65 QLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALY 144 (609)
Q Consensus 65 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~ 144 (609)
.||.++...|++++|+..+++++.. .+....+++.+|.+|...|++++|+.+|++++++.+ ....++.
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p------~~~~a~~ 69 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQE------RDPKAHR 69 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHH
Confidence 3677777888888888888887776 666777788888888888888888888888888766 4566888
Q ss_pred HHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHH-H
Q psy10738 145 NLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYY-H 223 (609)
Q Consensus 145 ~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~-~ 223 (609)
++|.+|...|+ +++|+.+|++++++ .+....++.++|.+|...|++++|... +
T Consensus 70 ~lg~~~~~~~~--------------------~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~~~~~~aa~~~~ 123 (150)
T 4ga2_A 70 FLGLLYELEEN--------------------TDKAVECYRRSVEL------NPTQKDLVLKIAELLCKNDVTDGRAKYWV 123 (150)
T ss_dssp HHHHHHHHTTC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHCSSSSHHHHHH
T ss_pred HHHHHHHHcCc--------------------hHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 88888888888 88888888888877 344566788888888888888776654 5
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC
Q psy10738 224 QERLKIAREFGDKAAERRANSNLGNSHIFLGE 255 (609)
Q Consensus 224 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 255 (609)
++++++.|.... ++...+.++...|+
T Consensus 124 ~~al~l~P~~~~------~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 124 ERAAKLFPGSPA------VYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHSTTCHH------HHHHHHHHHHTCCC
T ss_pred HHHHHhCcCCHH------HHHHHHHHHHHhCc
Confidence 788887665433 56666777666654
No 99
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=6.5e-15 Score=131.17 Aligned_cols=145 Identities=14% Similarity=0.169 Sum_probs=122.7
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q psy10738 29 GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGN 108 (609)
Q Consensus 29 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~ 108 (609)
|.++...|++++|+..+++++...|+++ ..++.+|.+|+..|++++|+.++++++++ .|..+.++..+|.
T Consensus 4 G~~~~~~~~~e~ai~~~~~a~~~~p~~~----~~~~~la~~y~~~~~~~~A~~~~~~al~~------~p~~~~a~~~lg~ 73 (150)
T 4ga2_A 4 GSMRRSKADVERYIASVQGSTPSPRQKS----IKGFYFAKLYYEAKEYDLAKKYICTYINV------QERDPKAHRFLGL 73 (150)
T ss_dssp ---CCCHHHHHHHHHHHHHHSCSHHHHH----TTHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHH
T ss_pred HHHHHHcChHHHHHHHHHHhcccCcccH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Confidence 5666778899999999999988777653 37789999999999999999999999999 7888999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHH-HHHHH
Q psy10738 109 TLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKY-YEQNL 187 (609)
Q Consensus 109 ~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~-~~~al 187 (609)
+|...|++++|+.+|++++++.+ ....+++++|.+|...|+ +++|... +++++
T Consensus 74 ~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~~~--------------------~~~aa~~~~~~al 127 (150)
T 4ga2_A 74 LYELEENTDKAVECYRRSVELNP------TQKDLVLKIAELLCKNDV--------------------TDGRAKYWVERAA 127 (150)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHCS--------------------SSSHHHHHHHHHH
T ss_pred HHHHcCchHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCC--------------------hHHHHHHHHHHHH
Confidence 99999999999999999999876 556789999999999999 8776665 58899
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHcCC
Q psy10738 188 ALMKEINDTAAQGRACGNLGNTYYLLGN 215 (609)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 215 (609)
++ .|....++..++.++...|+
T Consensus 128 ~l------~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 128 KL------FPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HH------STTCHHHHHHHHHHHHTCCC
T ss_pred Hh------CcCCHHHHHHHHHHHHHhCc
Confidence 88 34455678888888877775
No 100
>4g5s_E PINS homolog, G-protein-signaling modulator 2; galpha, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 3.62A {Mus musculus}
Probab=99.54 E-value=1.4e-15 Score=81.63 Aligned_cols=25 Identities=44% Similarity=0.805 Sum_probs=21.3
Q ss_pred CchHHHHHHhhhcccchhhhhcCCC
Q psy10738 502 DDDLLDMIVGLQSKRMDEQRAALPH 526 (609)
Q Consensus 502 ~~~~~~~l~~~Q~~R~~~qr~~~~~ 526 (609)
+|+|||||++|||+|||||||.+|.
T Consensus 1 dd~ff~ml~kcq~srlddqrcapps 25 (26)
T 4g5s_E 1 DEDFFDILVKCQGSRLDDQRCAPPS 25 (26)
T ss_dssp --CHHHHHHHHSCCCCSSSCBCCC-
T ss_pred ChhHHHHHHHhcccccccccCCCCC
Confidence 5899999999999999999999875
No 101
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.54 E-value=1.7e-13 Score=148.54 Aligned_cols=173 Identities=9% Similarity=-0.028 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-HHHHhCChHHHHHH
Q psy10738 178 EAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL-------LGNFK-------QAIYYHQERLK-IAREFGDKAAERRA 242 (609)
Q Consensus 178 ~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~-------~g~~~-------~A~~~~~~al~-~~~~~~~~~~~~~~ 242 (609)
.++..|++++... +....+|..+|.++.. .|+++ +|+..|++++. +.+.. ..+
T Consensus 256 ~a~~~y~~al~~~------p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~------~~l 323 (530)
T 2ooe_A 256 RVMFAYEQCLLVL------GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN------MLL 323 (530)
T ss_dssp HHHHHHHHHHHHH------TTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSC------HHH
T ss_pred HHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCccc------HHH
Confidence 5666777777763 3446788899998886 79987 88999999886 43322 348
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHH
Q psy10738 243 NSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRA 322 (609)
Q Consensus 243 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 322 (609)
+..+|.++...|++++|...|++++.+.+.. ...++..+|.++...|++++|...|.+++...+. ....
T Consensus 324 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~------~~~~ 392 (530)
T 2ooe_A 324 YFAYADYEESRMKYEKVHSIYNRLLAIEDID-----PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART------RHHV 392 (530)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSSSSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC------CTHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhCccccC-----chHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC------chHH
Confidence 8899999999999999999999999864321 1357888999999999999999999999875322 1223
Q ss_pred HHHHHHH-HHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCCCC
Q psy10738 323 CWSLGNA-HAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRKALGMSTND 379 (609)
Q Consensus 323 ~~~La~~-~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~~~g~~~~a 379 (609)
+...+.+ +...|++++|..+|+++++.. +....++..++.++...|+...|
T Consensus 393 ~~~~a~~~~~~~~~~~~A~~~~e~al~~~------p~~~~~~~~~~~~~~~~g~~~~A 444 (530)
T 2ooe_A 393 YVTAALMEYYCSKDKSVAFKIFELGLKKY------GDIPEYVLAYIDYLSHLNEDNNT 444 (530)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHH------TTCHHHHHHHHHHHTTTTCHHHH
T ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHC------CCCHHHHHHHHHHHHhCCCHhhH
Confidence 4444443 346899999999999999876 44567888899988888876544
No 102
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.53 E-value=1.9e-13 Score=130.50 Aligned_cols=89 Identities=9% Similarity=-0.062 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEG 140 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~ 140 (609)
..++.+|..++..|++++|+..|++++...+ +.+....+++.+|.+|...|++++|+..|+++++..+.. ....
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p---~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~---~~~~ 78 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYP---FGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH---PNID 78 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---TTHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC---CcHH
Confidence 3567777777777777777777777776521 123345677777778877888888888777777765532 2334
Q ss_pred HHHHHHHHHHHHccc
Q psy10738 141 RALYNLGNVYHAKGK 155 (609)
Q Consensus 141 ~~~~~lg~~~~~~g~ 155 (609)
.+++.+|.++...|.
T Consensus 79 ~a~~~~g~~~~~~~~ 93 (225)
T 2yhc_A 79 YVMYMRGLTNMALDD 93 (225)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhh
Confidence 567777777766554
No 103
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.52 E-value=9.6e-13 Score=125.57 Aligned_cols=194 Identities=12% Similarity=-0.030 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
..++..|..++..|++++|+..|++++...|.++. ...+++.+|.+|+..|++++|+..|+++++..+. .+....+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~-~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~---~~~~~~a 80 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY-SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT---HPNIDYV 80 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CTTHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC---CCcHHHH
Confidence 34566799999999999999999999999887643 3458899999999999999999999999987332 3334568
Q ss_pred HHHHHHHHHH------------------cCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCC
Q psy10738 103 SGNLGNTLKV------------------MGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQD 164 (609)
Q Consensus 103 ~~~lg~~~~~------------------~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~ 164 (609)
++.+|.++.. .|++++|+..|+++++..|.... ...+...++.+...
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~---a~~a~~~l~~~~~~------------ 145 (225)
T 2yhc_A 81 MYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQY---TTDATKRLVFLKDR------------ 145 (225)
T ss_dssp HHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTT---HHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChh---HHHHHHHHHHHHHH------------
Confidence 8899998876 57899999999999887764332 11122222211111
Q ss_pred CCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Q psy10738 165 PGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANS 244 (609)
Q Consensus 165 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 244 (609)
.......+|.+|...|++++|+..|+++++..+.. .....++.
T Consensus 146 ----------------------------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---~~~~~a~~ 188 (225)
T 2yhc_A 146 ----------------------------------LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT---QATRDALP 188 (225)
T ss_dssp ----------------------------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS---HHHHHHHH
T ss_pred ----------------------------------HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC---CccHHHHH
Confidence 11233567788888888888888888888886543 23345788
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 245 NLGNSHIFLGEYQAASEHYKRTLVLAQD 272 (609)
Q Consensus 245 ~la~~~~~~g~~~~A~~~~~~al~~~~~ 272 (609)
.+|.+|..+|++++|+.+++.+....+.
T Consensus 189 ~l~~~~~~~g~~~~A~~~~~~l~~~~~~ 216 (225)
T 2yhc_A 189 LMENAYRQMQMNAQAEKVAKIIAANSSN 216 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHhhCCC
Confidence 8888888888888888888887766543
No 104
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=6.7e-13 Score=125.44 Aligned_cols=177 Identities=18% Similarity=0.129 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcC----
Q psy10738 39 RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMG---- 114 (609)
Q Consensus 39 ~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g---- 114 (609)
.+|+.+|+++.+.+ + +.+++.+|.+|...+++++|+.+|+++.+. ..+.+++++|.+|.. +
T Consensus 3 ~eA~~~~~~aa~~g--~----~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--------g~~~a~~~lg~~y~~-~g~~~ 67 (212)
T 3rjv_A 3 TEPGSQYQQQAEAG--D----RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--------GDGDALALLAQLKIR-NPQQA 67 (212)
T ss_dssp -CTTHHHHHHHHTT--C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------TCHHHHHHHHHHTTS-STTSC
T ss_pred chHHHHHHHHHHCC--C----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHc-CCCCC
Confidence 35788899998863 4 348899999999999999999999999764 356889999999998 7
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHH
Q psy10738 115 KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA----KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALM 190 (609)
Q Consensus 115 ~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 190 (609)
++++|+.+|+++.+. ....+++++|.+|.. .++ +++|+.+|+++.+.
T Consensus 68 ~~~~A~~~~~~A~~~--------g~~~a~~~Lg~~y~~g~g~~~d--------------------~~~A~~~~~~A~~~- 118 (212)
T 3rjv_A 68 DYPQARQLAEKAVEA--------GSKSGEIVLARVLVNRQAGATD--------------------VAHAITLLQDAARD- 118 (212)
T ss_dssp CHHHHHHHHHHHHHT--------TCHHHHHHHHHHHTCGGGSSCC--------------------HHHHHHHHHHHTSS-
T ss_pred CHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCccC--------------------HHHHHHHHHHHHHc-
Confidence 899999999999653 346689999999987 667 99999999998865
Q ss_pred HHhCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-C-----CHHHHH
Q psy10738 191 KEINDTAAQGRACGNLGNTYYL----LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFL-G-----EYQAAS 260 (609)
Q Consensus 191 ~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~-g-----~~~~A~ 260 (609)
++......++++||.+|.. .+++++|+.+|+++.+. +... .+++++|.+|... | ++++|+
T Consensus 119 ---~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~------~a~~~Lg~~y~~g~gg~~~~d~~~A~ 188 (212)
T 3rjv_A 119 ---SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG------YAEYWAGMMFQQGEKGFIEPNKQKAL 188 (212)
T ss_dssp ---TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT------HHHHHHHHHHHHCBTTTBCCCHHHHH
T ss_pred ---CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH------HHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 2222457799999999999 88999999999999875 1112 2788999999865 3 899999
Q ss_pred HHHHHHHHH
Q psy10738 261 EHYKRTLVL 269 (609)
Q Consensus 261 ~~~~~al~~ 269 (609)
.+|+++.+.
T Consensus 189 ~~~~~A~~~ 197 (212)
T 3rjv_A 189 HWLNVSCLE 197 (212)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999998875
No 105
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.45 E-value=4e-13 Score=146.93 Aligned_cols=159 Identities=16% Similarity=0.133 Sum_probs=126.1
Q ss_pred cCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcC
Q psy10738 35 AGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMG 114 (609)
Q Consensus 35 ~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g 114 (609)
.|++++|+..|+++++.+|++. .++..+|.++...|++++|+.++++++++ .+....++.++|.+|...|
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g 71 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDF----VAWLMLADAELGMGDTTAGEMAVQRGLAL------HPGHPEAVARLGRVRWTQQ 71 (568)
T ss_dssp -------------------CCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHTT------STTCHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHCC
Confidence 4789999999999999999874 48999999999999999999999999998 6777899999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhC
Q psy10738 115 KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEIN 194 (609)
Q Consensus 115 ~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 194 (609)
++++|+.+|++++++.+ ....++.++|.+|...|+ +++|+.++++++++
T Consensus 72 ~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~--------------------~~~A~~~~~~al~~----- 120 (568)
T 2vsy_A 72 RHAEAAVLLQQASDAAP------EHPGIALWLGHALEDAGQ--------------------AEAAAAAYTRAHQL----- 120 (568)
T ss_dssp CHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHh-----
Confidence 99999999999999865 446789999999999999 99999999999987
Q ss_pred ChHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHhCC
Q psy10738 195 DTAAQGRACGNLGNTYYLL---GNFKQAIYYHQERLKIAREFGD 235 (609)
Q Consensus 195 ~~~~~~~~~~~lg~~~~~~---g~~~~A~~~~~~al~~~~~~~~ 235 (609)
.+....++.++|.++... |++++|+.+++++++..+....
T Consensus 121 -~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 121 -LPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred -CCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccC
Confidence 334457899999999999 9999999999999998776555
No 106
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.44 E-value=2.1e-12 Score=128.24 Aligned_cols=229 Identities=9% Similarity=-0.019 Sum_probs=189.5
Q ss_pred HHHHHhcCCh-HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHcCChhhHHHHHHH
Q psy10738 29 GERLCKAGDC-RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLG--DYQKAMQYHKQDLTLARNMEDKLGEAKSSGN 105 (609)
Q Consensus 29 g~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~ 105 (609)
.......|.+ ++|+.++.++|.++|++.. +++..+.+...+| .+++++.++..++.. .|....+++.
T Consensus 39 ~~a~~~~~e~s~~aL~~t~~~L~~nP~~~t----aWn~R~~~L~~l~~~~~~eeL~~~~~~L~~------nPk~y~aW~~ 108 (306)
T 3dra_A 39 LLALMKAEEYSERALHITELGINELASHYT----IWIYRFNILKNLPNRNLYDELDWCEEIALD------NEKNYQIWNY 108 (306)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHTCTTSCHHHHHHHHHHHHHH------CTTCCHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHCcHHHH----HHHHHHHHHHHcccccHHHHHHHHHHHHHH------CcccHHHHHH
Confidence 3444566666 6899999999999999854 8999999999999 999999999999998 7888899999
Q ss_pred HHHHH----HHc---CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHH-
Q psy10738 106 LGNTL----KVM---GKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQ- 177 (609)
Q Consensus 106 lg~~~----~~~---g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 177 (609)
.+.++ ... +++++++.++.++++..+ ....++...+.+....|. ++
T Consensus 109 R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~p------kny~aW~~R~~vl~~l~~--------------------~~~ 162 (306)
T 3dra_A 109 RQLIIGQIMELNNNDFDPYREFDILEAMLSSDP------KNHHVWSYRKWLVDTFDL--------------------HND 162 (306)
T ss_dssp HHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------TTC
T ss_pred HHHHHHHHHHhccccCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcc--------------------cCh
Confidence 99999 777 789999999999998776 556799999999999998 77
Q ss_pred -HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy10738 178 -EAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN------FKQAIYYHQERLKIAREFGDKAAERRANSNLGNSH 250 (609)
Q Consensus 178 -~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 250 (609)
++++++.++++. .+....++.+.+.+....|. ++++++++.+++...+.... +++.++.++
T Consensus 163 ~~EL~~~~~~i~~------d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~S------aW~y~~~ll 230 (306)
T 3dra_A 163 AKELSFVDKVIDT------DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPS------TWNYLLGIH 230 (306)
T ss_dssp HHHHHHHHHHHHH------CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHH------HHHHHHHHH
T ss_pred HHHHHHHHHHHHh------CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCcc------HHHHHHHHH
Confidence 999999999876 45556789999999998887 99999999999988665544 888999999
Q ss_pred HHhCCHHH-HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy10738 251 IFLGEYQA-ASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLI 308 (609)
Q Consensus 251 ~~~g~~~~-A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 308 (609)
...|+... ...++.+++.+.. .......++..+|.+|...|+.++|+++|+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~ 286 (306)
T 3dra_A 231 ERFDRSITQLEEFSLQFVDLEK---DQVTSSFALETLAKIYTQQKKYNESRTVYDLLKS 286 (306)
T ss_dssp HHTTCCGGGGHHHHHTTEEGGG---TEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCCChHHHHHHHHHHHhccC---CCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHh
Confidence 99988544 4456655554320 1122356888999999999999999999998764
No 107
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.43 E-value=1.5e-12 Score=111.96 Aligned_cols=110 Identities=18% Similarity=0.229 Sum_probs=99.1
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+..+|..++..|+|++|+..|+++++.+|.+.. ++..+|.+|..+|++++|+..+++++++ .+....++
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~a~ 84 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAI----LYSNRAACLTKLMEFQRALDDCDTCIRL------DSKFIKGY 84 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHhhHHHhhccHHHHHHHHHHHHHh------hhhhhHHH
Confidence 4456799999999999999999999999998854 8999999999999999999999999999 78889999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNV 149 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~ 149 (609)
+++|.++..+|++++|+.+|++++++.| ....++..++.+
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~l~P------~~~~a~~~l~~~ 124 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQVDP------SNEEAREGVRNC 124 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCc------CCHHHHHHHHHh
Confidence 9999999999999999999999999877 445566677665
No 108
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.42 E-value=2.7e-12 Score=139.13 Aligned_cols=225 Identities=9% Similarity=0.014 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH-------hCCHH-------HHHHHHHHHHH-HHHHcCChhhHHHHH
Q psy10738 39 RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY-------LGDYQ-------KAMQYHKQDLT-LARNMEDKLGEAKSS 103 (609)
Q Consensus 39 ~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~-------~g~~~-------~A~~~~~~al~-~~~~~~d~~~~~~a~ 103 (609)
..|+..|++++...|.++. +|..+|..+.. .|+++ +|+..+++++. + .|....++
T Consensus 255 ~~a~~~y~~al~~~p~~~~----~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~------~p~~~~l~ 324 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPD----IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL------LKKNMLLY 324 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHH----HHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT------CSSCHHHH
T ss_pred HHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh------CcccHHHH
Confidence 4788999999999998754 88889988876 78887 88888888876 4 45667889
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYY 183 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 183 (609)
..+|.++...|++++|...|++++++.+. ....++..+|.++...|+ +++|...|
T Consensus 325 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~--------------------~~~A~~~~ 379 (530)
T 2ooe_A 325 FAYADYEESRMKYEKVHSIYNRLLAIEDI-----DPTLVYIQYMKFARRAEG--------------------IKSGRMIF 379 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSSS-----CHHHHHHHHHHHHHHHHH--------------------HHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhCcccc-----CchHHHHHHHHHHHHhcC--------------------HHHHHHHH
Confidence 99999999999999999999999875331 123578888888888888 89999999
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHH
Q psy10738 184 EQNLALMKEINDTAAQGRACGNLGNT-YYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEH 262 (609)
Q Consensus 184 ~~al~~~~~~~~~~~~~~~~~~lg~~-~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 262 (609)
+++++.. +.....+...+.+ +...|++++|..+|+++++..+... .++..++.++...|++++|..+
T Consensus 380 ~~Al~~~------~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~------~~~~~~~~~~~~~g~~~~Ar~~ 447 (530)
T 2ooe_A 380 KKAREDA------RTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIP------EYVLAYIDYLSHLNEDNNTRVL 447 (530)
T ss_dssp HHHHTCT------TCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHTTTTCHHHHHHH
T ss_pred HHHHhcc------CCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCH------HHHHHHHHHHHhCCCHhhHHHH
Confidence 8887642 1112233333433 3357888888888888887765332 2677778888888888888888
Q ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 263 YKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 263 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
|++++...+. ++.....++...+......|+.+.+..++.++++..++
T Consensus 448 ~~~al~~~~~--~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~r~~~~~p~ 495 (530)
T 2ooe_A 448 FERVLTSGSL--PPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 495 (530)
T ss_dssp HHHHHHSCCS--CGGGCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTHH
T ss_pred HHHHHhccCC--CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCch
Confidence 8888765321 11122345555566667778888888888888777764
No 109
>4g5o_E G-protein-signaling modulator 2; galphai, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 2.90A {Mus musculus} PDB: 4g5q_E* 4g5r_E*
Probab=99.41 E-value=4.6e-14 Score=75.04 Aligned_cols=24 Identities=58% Similarity=0.880 Sum_probs=20.9
Q ss_pred chhHHHHHHHhhccccchhcccCC
Q psy10738 567 DEDFFSLITRLQSGRMEDQRATVP 590 (609)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~ 590 (609)
||||||||+|+|++||||||+-+.
T Consensus 1 dedffslilrsqakrmdeqrvllq 24 (26)
T 4g5o_E 1 DEDFFSLILRSQAKRMDEQRVLLQ 24 (26)
T ss_dssp -CCHHHHHHHHHHCSCGGGCBCC-
T ss_pred CchHHHHHHHHHHHhhhHHHhhhc
Confidence 689999999999999999999764
No 110
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.41 E-value=4.5e-13 Score=122.51 Aligned_cols=58 Identities=7% Similarity=-0.007 Sum_probs=30.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 28 EGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTL 89 (609)
Q Consensus 28 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 89 (609)
.|..+...|++++|+..|+++++.+|++.. ++..+|.++...|++++|+..+++++..
T Consensus 12 ~a~~~~~~g~~~~A~~~~~~al~~~P~~~~----a~~~la~~~~~~g~~~~A~~~~~~a~~~ 69 (176)
T 2r5s_A 12 QVSELLQQGEHAQALNVIQTLSDELQSRGD----VKLAKADCLLETKQFELAQELLATIPLE 69 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHTSCHHHHTSHH----HHHHHHHHHHHTTCHHHHHHHHTTCCGG
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCcHH----HHHHHHHHHHHCCCHHHHHHHHHHhhhc
Confidence 355555555555555555555555555422 4555555555555555555555555443
No 111
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.41 E-value=9.6e-13 Score=124.37 Aligned_cols=177 Identities=17% Similarity=0.118 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcc--
Q psy10738 77 QKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKG-- 154 (609)
Q Consensus 77 ~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g-- 154 (609)
.+|+.+|+++.+. ..+.+++.+|.+|...+++++|+.+|+++.+. ..+.+++++|.+|.. +
T Consensus 3 ~eA~~~~~~aa~~--------g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--------g~~~a~~~lg~~y~~-~g~ 65 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--------GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--------GDGDALALLAQLKIR-NPQ 65 (212)
T ss_dssp -CTTHHHHHHHHT--------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------TCHHHHHHHHHHTTS-STT
T ss_pred chHHHHHHHHHHC--------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHc-CCC
Confidence 3567778777653 45778999999999999999999999999763 345789999999988 6
Q ss_pred --cccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q psy10738 155 --KAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL----LGNFKQAIYYHQERLK 228 (609)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 228 (609)
+ +++|+.+|+++.+. + ...+++++|.+|.. .+++++|+.+|+++.+
T Consensus 66 ~~~--------------------~~~A~~~~~~A~~~----g----~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~ 117 (212)
T 3rjv_A 66 QAD--------------------YPQARQLAEKAVEA----G----SKSGEIVLARVLVNRQAGATDVAHAITLLQDAAR 117 (212)
T ss_dssp SCC--------------------HHHHHHHHHHHHHT----T----CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTS
T ss_pred CCC--------------------HHHHHHHHHHHHHC----C----CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHH
Confidence 6 99999999998642 2 35688999999987 8999999999999986
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHh-C-----CHHH
Q psy10738 229 IAREFGDKAAERRANSNLGNSHIF----LGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLL-R-----DYPT 298 (609)
Q Consensus 229 ~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~-g-----~~~~ 298 (609)
.. +......++++||.+|.. .+++++|+.+|+++.+. + ++ ..+++.||.+|... | ++++
T Consensus 118 ~~----~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~--~~----~~a~~~Lg~~y~~g~gg~~~~d~~~ 186 (212)
T 3rjv_A 118 DS----ESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-S--RT----GYAEYWAGMMFQQGEKGFIEPNKQK 186 (212)
T ss_dssp ST----TSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-S--CT----THHHHHHHHHHHHCBTTTBCCCHHH
T ss_pred cC----CCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-C--CC----HHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 42 211234589999999999 88999999999999875 1 12 44789999999764 3 8999
Q ss_pred HHHHHHHHHHH
Q psy10738 299 AIDYHLRHLII 309 (609)
Q Consensus 299 A~~~~~~al~~ 309 (609)
|+.+|+++.+.
T Consensus 187 A~~~~~~A~~~ 197 (212)
T 3rjv_A 187 ALHWLNVSCLE 197 (212)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999998865
No 112
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.41 E-value=2e-12 Score=128.28 Aligned_cols=167 Identities=13% Similarity=0.083 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEG 140 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~ 140 (609)
..+..+|..+...|++++|+..|++++.. .|....+++.+|.++...|++++|+..+++++...+ ...
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p------~~~ 185 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQL------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQ------DTR 185 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGC------SHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHh------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhc------chH
Confidence 35677777777777777777777777777 666677777777777777777777777777765543 223
Q ss_pred HHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHH
Q psy10738 141 RALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAI 220 (609)
Q Consensus 141 ~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~ 220 (609)
......+..+...++ ...|+..+++++.. .+....+++++|.++...|++++|+
T Consensus 186 ~~~~~~~~~l~~~~~--------------------~~~a~~~l~~al~~------~P~~~~~~~~la~~l~~~g~~~~A~ 239 (287)
T 3qou_A 186 YQGLVAQIELLXQAA--------------------DTPEIQQLQQQVAE------NPEDAALATQLALQLHQVGRNEEAL 239 (287)
T ss_dssp HHHHHHHHHHHHHHT--------------------SCHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhhcc--------------------cCccHHHHHHHHhc------CCccHHHHHHHHHHHHHcccHHHHH
Confidence 445555666666666 66777777777766 3445567777788888888888888
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 221 YYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 269 (609)
Q Consensus 221 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 269 (609)
..|.+++...+...+ ..++.++|.++...|+.++|...|++++..
T Consensus 240 ~~l~~~l~~~p~~~~----~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 240 ELLFGHLRXDLTAAD----GQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHCTTGGG----GHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccccccc----chHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 888887777655421 236777777788888877787777777754
No 113
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.41 E-value=2e-14 Score=146.23 Aligned_cols=192 Identities=15% Similarity=0.139 Sum_probs=150.8
Q ss_pred CChHHHHHHHHH----HHHhCCcchhHHHHHHHHHHHHHH------------HhCCHHHHHHHHHHHHHHHHHcCChhhH
Q psy10738 36 GDCRAGVAFFQA----AIQAGTDDLRTLSAIYSQLGNAYF------------YLGDYQKAMQYHKQDLTLARNMEDKLGE 99 (609)
Q Consensus 36 g~~~~A~~~~~~----al~~~~~~~~~~a~~~~~lg~~~~------------~~g~~~~A~~~~~~al~~~~~~~d~~~~ 99 (609)
+.+++|+..+.. ++.+.|.. +|..+|.... .++++++|+..+++++.. .+..
T Consensus 79 ~~~e~al~~~~~Ge~~~l~i~p~~------ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~------~p~~ 146 (336)
T 1p5q_A 79 YGLERAIQRMEKGEHSIVYLKPSY------AFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEE------KLEQ 146 (336)
T ss_dssp HHHHHHHTTCCTTCEEEEEECTTT------TTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHH------HHHH
T ss_pred hHHHHHHhcCCCCCeEEEEECCcc------ccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHH------HHHH
Confidence 356677777777 66666653 3444444432 456778888888888877 7788
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcccccccCCCCCCCCCch
Q psy10738 100 AKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLND---------KLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPE 170 (609)
Q Consensus 100 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d---------~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~ 170 (609)
+.++..+|.++...|++++|+.+|++++.+.+...+ ......++.++|.+|...|+
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~--------------- 211 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQA--------------- 211 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTC---------------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCC---------------
Confidence 999999999999999999999999999999875421 12336789999999999999
Q ss_pred HhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy10738 171 EVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSH 250 (609)
Q Consensus 171 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 250 (609)
+++|+.+|++++.+ .+....+++++|.+|..+|++++|+.+|++++++.+... .++.++|.++
T Consensus 212 -----~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~------~a~~~l~~~~ 274 (336)
T 1p5q_A 212 -----FSAAIESCNKALEL------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK------AAKTQLAVCQ 274 (336)
T ss_dssp -----HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH------HHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHH
Confidence 99999999999987 344567899999999999999999999999998865433 3788899999
Q ss_pred HHhCCHHHH-HHHHHHHHHHHH
Q psy10738 251 IFLGEYQAA-SEHYKRTLVLAQ 271 (609)
Q Consensus 251 ~~~g~~~~A-~~~~~~al~~~~ 271 (609)
...|++++| ...|++.+....
T Consensus 275 ~~~~~~~~a~~~~~~~~~~~~~ 296 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFERLA 296 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 999999888 456666655443
No 114
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.40 E-value=1.5e-13 Score=141.03 Aligned_cols=95 Identities=13% Similarity=0.041 Sum_probs=53.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHhcchhhHHHH
Q psy10738 245 NLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL--LRDYPTAIDYHLRHLIIAQQLMDRVGEGRA 322 (609)
Q Consensus 245 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~--~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 322 (609)
.+..+|...|.+++|+.++++++.+.+.. ..++..+|.+|.+ .++..++++.|...+.+.+-+. .......
T Consensus 212 ~lv~~Yek~G~~eEai~lLe~aL~le~ah------~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~-~~~~~~~ 284 (449)
T 1b89_A 212 ELINYYQDRGYFEELITMLEAALGLERAH------MGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR-AAEQAHL 284 (449)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSTTCC------HHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHH-HHHTTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHH-HHHHHHH
Confidence 35566667777777777777666544321 4455555555543 3344455555544443333110 0123446
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHH
Q psy10738 323 CWSLGNAHAARGNHEKALYFATKH 346 (609)
Q Consensus 323 ~~~La~~~~~~g~~~~A~~~~~~a 346 (609)
|..+..+|..-++++.|....-++
T Consensus 285 w~e~~~ly~~~~e~d~A~~tm~~h 308 (449)
T 1b89_A 285 WAELVFLYDKYEEYDNAIITMMNH 308 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhhchHHHHHHHHHhC
Confidence 777888888888888887654443
No 115
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.40 E-value=3.1e-12 Score=126.96 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=107.2
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
++..|..+...|++++|+..|+++++.+|++.. +++.+|.++...|++++|+..+++++.. .+.......
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~----a~~~la~~~~~~g~~~~A~~~l~~~~~~------~p~~~~~~~ 189 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQLSNQNGE----IGLLLAETLIALNRSEDAEAVLXTIPLQ------DQDTRYQGL 189 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHH----HHHHHHHHHHHTTCHHHHHHHHTTSCGG------GCSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchh----HHHHHHHHHHHCCCHHHHHHHHHhCchh------hcchHHHHH
Confidence 344566677777777777777777777776633 6667777777777777777777766555 333444555
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYE 184 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 184 (609)
..+..+...++.++|+..+++++...+ ....+++++|.++...|+ +++|+..|.
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~~al~~~P------~~~~~~~~la~~l~~~g~--------------------~~~A~~~l~ 243 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQQQVAENP------EDAALATQLALQLHQVGR--------------------NEEALELLF 243 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHH
T ss_pred HHHHHHHhhcccCccHHHHHHHHhcCC------ccHHHHHHHHHHHHHccc--------------------HHHHHHHHH
Confidence 556666666667777777777766655 445567777777777777 777777777
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 185 QNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 185 ~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 229 (609)
+++...+.. ....++.++|.++..+|+.++|+..|++++..
T Consensus 244 ~~l~~~p~~----~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 244 GHLRXDLTA----ADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHCTTG----GGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhccccc----ccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 766652211 11456677777777777777777777766553
No 116
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.39 E-value=3.1e-12 Score=109.96 Aligned_cols=113 Identities=19% Similarity=0.244 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLS 138 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~ 138 (609)
.+..+..+|..|+..|+|++|+.+|++++++ .|..+.++.++|.+|..+|++++|+..|++++++.+ .
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------~ 79 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDS------K 79 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------T
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhh------h
Confidence 4678999999999999999999999999999 788899999999999999999999999999999866 5
Q ss_pred HHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q psy10738 139 EGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNT 209 (609)
Q Consensus 139 ~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 209 (609)
...+++++|.+|..+|+ +++|+..|++++++ .|....++.+++.+
T Consensus 80 ~~~a~~~lg~~~~~~~~--------------------~~~A~~~~~~al~l------~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 80 FIKGYIRKAACLVAMRE--------------------WSKAQRAYEDALQV------DPSNEEAREGVRNC 124 (126)
T ss_dssp CHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHH------CcCCHHHHHHHHHh
Confidence 56799999999999999 99999999999998 34445667777665
No 117
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.38 E-value=1.4e-13 Score=141.23 Aligned_cols=240 Identities=15% Similarity=0.159 Sum_probs=97.4
Q ss_pred HHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q psy10738 32 LCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLK 111 (609)
Q Consensus 32 ~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~ 111 (609)
.-..|+.++|.+++++. ++ ..+|..+|.++...|++++|++.|.++- ....+..++..+.
T Consensus 13 l~~~~~ld~A~~fae~~-----~~----~~vWs~La~A~l~~g~~~eAIdsfika~-----------D~~~y~~V~~~ae 72 (449)
T 1b89_A 13 IEHIGNLDRAYEFAERC-----NE----PAVWSQLAKAQLQKGMVKEAIDSYIKAD-----------DPSSYMEVVQAAN 72 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHccCHHHHHHHHHhC-----CC----hHHHHHHHHHHHHcCCHHHHHHHHHcCC-----------CHHHHHHHHHHHH
Confidence 44678899999999887 12 2388999999999999999999997631 2346778888889
Q ss_pred HcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHH
Q psy10738 112 VMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMK 191 (609)
Q Consensus 112 ~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 191 (609)
..|++++|+.+++.+.+..+ .+.+...++.+|...|+ +.++..++..
T Consensus 73 ~~g~~EeAi~yl~~ark~~~-------~~~i~~~Li~~Y~Klg~--------------------l~e~e~f~~~------ 119 (449)
T 1b89_A 73 TSGNWEELVKYLQMARKKAR-------ESYVETELIFALAKTNR--------------------LAELEEFING------ 119 (449)
T ss_dssp -------------------------------------------C--------------------HHHHTTTTTC------
T ss_pred hCCCHHHHHHHHHHHHHhCc-------cchhHHHHHHHHHHhCC--------------------HHHHHHHHcC------
Confidence 99999999999998877432 14567788999999999 8888877742
Q ss_pred HhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q psy10738 192 EINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQ 271 (609)
Q Consensus 192 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 271 (609)
+. ..++.++|..+...|.|++|+.+|.++ . .+..+|.++..+|+|++|++.++++.
T Consensus 120 -----pn-~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~------n~~~LA~~L~~Lg~yq~AVea~~KA~---- 175 (449)
T 1b89_A 120 -----PN-NAHIQQVGDRCYDEKMYDAAKLLYNNV--------S------NFGRLASTLVHLGEYQAAVDGARKAN---- 175 (449)
T ss_dssp -----C-----------------CTTTHHHHHHHT--------T------CHHHHHHHHHTTTCHHHHHHHHHHHT----
T ss_pred -----Cc-HHHHHHHHHHHHHcCCHHHHHHHHHHh--------h------hHHHHHHHHHHhccHHHHHHHHHHcC----
Confidence 11 238999999999999999999999976 2 67889999999999999999999881
Q ss_pred HcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy10738 272 DLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISK 351 (609)
Q Consensus 272 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~ 351 (609)
...+|...+.++...|+++.|..+..... .. +.-...+..+|.+.|.+++|+.++++++.+-
T Consensus 176 -------~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~-~~---------ad~l~~lv~~Yek~G~~eEai~lLe~aL~le- 237 (449)
T 1b89_A 176 -------STRTWKEVCFACVDGKEFRLAQMCGLHIV-VH---------ADELEELINYYQDRGYFEELITMLEAALGLE- 237 (449)
T ss_dssp -------CHHHHHHHHHHHHHTTCHHHHHHTTTTTT-TC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTST-
T ss_pred -------CchhHHHHHHHHHHcCcHHHHHHHHHHHH-hC---------HhhHHHHHHHHHHCCCHHHHHHHHHHHhCCc-
Confidence 15677888899999999999976665411 11 1123458889999999999999999987643
Q ss_pred HcCCCchHHHHHHHHHHHHH
Q psy10738 352 QLGDPLGQVTAQMNVTDLRK 371 (609)
Q Consensus 352 ~~~~~~~~~~a~~~la~l~~ 371 (609)
+....+...|+.+|.
T Consensus 238 -----~ah~~~ftel~il~~ 252 (449)
T 1b89_A 238 -----RAHMGMFTELAILYS 252 (449)
T ss_dssp -----TCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHH
Confidence 344566666666664
No 118
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.38 E-value=5.9e-13 Score=121.74 Aligned_cols=62 Identities=15% Similarity=0.036 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 242 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 307 (609)
Q Consensus 242 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 307 (609)
+++++|.++...|++++|+.+|++++...+...+ ..++..+|.++...|++++|+..|++++
T Consensus 110 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~----~~a~~~l~~~~~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 110 LACELAVQYNQVGRDEEALELLWNILKVNLGAQD----GEVKKTFMDILSALGQGNAIASKYRRQL 171 (176)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTT----THHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCcccCh----HHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 4444555555555555555555544443332111 2244444555555555555555555444
No 119
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.37 E-value=7.3e-12 Score=107.77 Aligned_cols=108 Identities=16% Similarity=0.179 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC-C
Q psy10738 197 AAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG-D 275 (609)
Q Consensus 197 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~ 275 (609)
...+.++.++|.+++..|+|++|+.+|++++++.+.. ..++.++|.+|..+|++++|+.++++++++.+... .
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~------~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN------ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 4456788999999999999999999999999986543 34899999999999999999999999999998864 4
Q ss_pred cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q psy10738 276 RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 310 (609)
Q Consensus 276 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 310 (609)
....+.++..+|.++..+|++++|+.+|++++...
T Consensus 79 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 79 YKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 45567889999999999999999999999998754
No 120
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.35 E-value=2.5e-12 Score=140.65 Aligned_cols=157 Identities=14% Similarity=0.057 Sum_probs=123.5
Q ss_pred hCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Q psy10738 73 LGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA 152 (609)
Q Consensus 73 ~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~ 152 (609)
.|++++|+.+++++++. .+....++..+|.++...|++++|+.+|++++++.+ ....++.++|.+|..
T Consensus 2 ~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~ 69 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH------RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHP------GHPEAVARLGRVRWT 69 (568)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTST------TCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHH
Confidence 47899999999999988 677789999999999999999999999999998765 456789999999999
Q ss_pred cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 153 KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 153 ~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 232 (609)
.|+ +++|+.++++++++ .+....++.++|.+|...|++++|+.++++++++.+.
T Consensus 70 ~g~--------------------~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 70 QQR--------------------HAEAAVLLQQASDA------APEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp TTC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCC--------------------HHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 999 99999999999987 3344678999999999999999999999999998654
Q ss_pred hCChHHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHc
Q psy10738 233 FGDKAAERRANSNLGNSHIFL---GEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 233 ~~~~~~~~~~~~~la~~~~~~---g~~~~A~~~~~~al~~~~~~ 273 (609)
.. .++.++|.++... |++++|+.+++++++..+..
T Consensus 124 ~~------~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 124 EP------YITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp CH------HHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred CH------HHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 32 3889999999999 99999999999999887654
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.35 E-value=7.8e-13 Score=117.48 Aligned_cols=112 Identities=8% Similarity=0.066 Sum_probs=90.9
Q ss_pred HHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHH
Q psy10738 43 AFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVC 122 (609)
Q Consensus 43 ~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~ 122 (609)
..+++++.++|++ ..+++.+|.+++..|++++|+.+|++++.+ .|..+.+|.++|.+|...|++++|+.+
T Consensus 23 ~~l~~al~l~p~~----~~~~~~lg~~~~~~g~~~eA~~~~~~al~~------~P~~~~~~~~lg~~~~~~g~~~~Ai~~ 92 (151)
T 3gyz_A 23 ATLKDINAIPDDM----MDDIYSYAYDFYNKGRIEEAEVFFRFLCIY------DFYNVDYIMGLAAIYQIKEQFQQAADL 92 (151)
T ss_dssp CCTGGGCCSCHHH----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHhCCCHHH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHccHHHHHHH
Confidence 4455566666665 347888888888888888888888888888 777888888888888888888888888
Q ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHH
Q psy10738 123 CKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALM 190 (609)
Q Consensus 123 ~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 190 (609)
|++++.+.+ ....+++++|.+|...|+ +++|+.+|++++++.
T Consensus 93 ~~~al~l~P------~~~~~~~~lg~~~~~lg~--------------------~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 93 YAVAFALGK------NDYTPVFHTGQCQLRLKA--------------------PLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHHHHSS------SCCHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHC
T ss_pred HHHHHhhCC------CCcHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHhC
Confidence 888888876 345678888888888888 888888888888774
No 122
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.35 E-value=3.7e-11 Score=102.80 Aligned_cols=120 Identities=14% Similarity=0.096 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
..+...|..++..|++++|+..|+++++..|++. .++..+|.++...|++++|+..+++++.+ .+....+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~ 74 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA----RGYSNRAAALAKLMSFPEAIADCNKAIEK------DPNFVRA 74 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh----HHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCcHHH
Confidence 3556679999999999999999999999999885 48999999999999999999999999999 7778899
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA 152 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~ 152 (609)
++.+|.++...|++++|+.+|++++.+.+...+.+....++..++.+...
T Consensus 75 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 75 YIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999997665555666677676666543
No 123
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.34 E-value=1.5e-11 Score=122.12 Aligned_cols=225 Identities=8% Similarity=-0.049 Sum_probs=184.1
Q ss_pred HHhCCH-HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Q psy10738 71 FYLGDY-QKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMG--KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLG 147 (609)
Q Consensus 71 ~~~g~~-~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g--~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg 147 (609)
...|++ ++|+..+.+++.+ .|....+++..+.++...| .+++++.++.+++...+ ....+++..+
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~------nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nP------k~y~aW~~R~ 110 (306)
T 3dra_A 43 MKAEEYSERALHITELGINE------LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNE------KNYQIWNYRQ 110 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCT------TCCHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHH------CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCc------ccHHHHHHHH
Confidence 344444 7899999999999 8999999999999999999 99999999999998877 4456788888
Q ss_pred HHH----HHc---ccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHH--H
Q psy10738 148 NVY----HAK---GKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFK--Q 218 (609)
Q Consensus 148 ~~~----~~~---g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~--~ 218 (609)
.++ ... ++ +++++.++.++++. .+....++.+.+.+....|.++ +
T Consensus 111 ~iL~~~~~~l~~~~~--------------------~~~EL~~~~~~l~~------~pkny~aW~~R~~vl~~l~~~~~~~ 164 (306)
T 3dra_A 111 LIIGQIMELNNNDFD--------------------PYREFDILEAMLSS------DPKNHHVWSYRKWLVDTFDLHNDAK 164 (306)
T ss_dssp HHHHHHHHHTTTCCC--------------------THHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCTTCHH
T ss_pred HHHHHHHHhccccCC--------------------HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcccChHH
Confidence 888 555 55 89999999999987 4555779999999999999998 9
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGE------YQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL 292 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 292 (609)
+++++.++++..+.+.. ++...+.+....|. ++++++++.+++...+.. ..+++.++.++..
T Consensus 165 EL~~~~~~i~~d~~N~s------AW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n------~SaW~y~~~ll~~ 232 (306)
T 3dra_A 165 ELSFVDKVIDTDLKNNS------AWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQN------PSTWNYLLGIHER 232 (306)
T ss_dssp HHHHHHHHHHHCTTCHH------HHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSC------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHH------HHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCC------ccHHHHHHHHHHh
Confidence 99999999987554433 88888999888887 999999999999887764 6788899999999
Q ss_pred hCCHHH-HHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy10738 293 LRDYPT-AIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLE 348 (609)
Q Consensus 293 ~g~~~~-A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~ 348 (609)
.|+... ...++.+++.+. ........++..+|.+|...|+.++|+++++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~---~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~ 286 (306)
T 3dra_A 233 FDRSITQLEEFSLQFVDLE---KDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKS 286 (306)
T ss_dssp TTCCGGGGHHHHHTTEEGG---GTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHhcc---CCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHh
Confidence 998555 445666555432 01133456899999999999999999999999765
No 124
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.34 E-value=1.1e-12 Score=133.40 Aligned_cols=161 Identities=15% Similarity=0.141 Sum_probs=132.1
Q ss_pred cCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC---------ChhhHHHHHHH
Q psy10738 35 AGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNME---------DKLGEAKSSGN 105 (609)
Q Consensus 35 ~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---------d~~~~~~a~~~ 105 (609)
.+++++|+..|++++...|.+ +.++..+|.+++..|++++|+.+|++++.+..... ..+..+.++.+
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~----a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~n 201 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQ----STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLN 201 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHH----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHH----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHH
Confidence 456677777777777766554 55889999999999999999999999999843321 01223789999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHH
Q psy10738 106 LGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQ 185 (609)
Q Consensus 106 lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 185 (609)
+|.+|..+|++++|+.+|++++.+.+ ....+++++|.+|...|+ +++|+.+|++
T Consensus 202 la~~~~~~g~~~~A~~~~~~al~~~p------~~~~a~~~lg~~~~~~g~--------------------~~~A~~~~~~ 255 (336)
T 1p5q_A 202 LAMCHLKLQAFSAAIESCNKALELDS------NNEKGLSRRGEAHLAVND--------------------FELARADFQK 255 (336)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHCCC--------------------HHHHHHHHHH
Confidence 99999999999999999999999876 456799999999999999 9999999999
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHH
Q psy10738 186 NLALMKEINDTAAQGRACGNLGNTYYLLGNFKQA-IYYHQERLKIAR 231 (609)
Q Consensus 186 al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A-~~~~~~al~~~~ 231 (609)
++++ .+....++.++|.++..+|++++| ...|++.+....
T Consensus 256 al~l------~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 296 (336)
T 1p5q_A 256 VLQL------YPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLA 296 (336)
T ss_dssp HHHH------CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9988 334456899999999999999999 556777665543
No 125
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.33 E-value=3.3e-11 Score=103.60 Aligned_cols=105 Identities=20% Similarity=0.322 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-CcH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLN-DKL 137 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~-d~~ 137 (609)
.+.++..+|..++..|+|++|+.+|++++++ .|..+.++.++|.+|..+|++++|+.++++++++.+... ...
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 80 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhH
Confidence 4668899999999999999999999999999 778899999999999999999999999999999998764 345
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 189 (609)
..+.++.++|.++...|+ +++|+.+|++++..
T Consensus 81 ~~a~~~~~lg~~~~~~~~--------------------~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 81 LIAKAMSRAGNAFQKQND--------------------LSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHhh
Confidence 678899999999999999 99999999999875
No 126
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.30 E-value=9.6e-11 Score=104.90 Aligned_cols=140 Identities=16% Similarity=0.207 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHH
Q psy10738 21 MCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEA 100 (609)
Q Consensus 21 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~ 100 (609)
....+...|..++..|++++|+..|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+...
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~~~~~ 81 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNA----IYYGNRSLAYLRTECYGYALGDATRAIEL------DKKYI 81 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCh----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CcccH
Confidence 344566779999999999999999999999999874 48899999999999999999999999998 66778
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHH
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAI 180 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~ 180 (609)
.++..+|.++...|++++|+.++++++.+.+.. .....+..++..+...|+ +++|+
T Consensus 82 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~----~~~~~~~~~~~~~~~~~~--------------------~~~A~ 137 (166)
T 1a17_A 82 KGYYRRAASNMALGKFRAALRDYETVVKVKPHD----KDAKMKYQECNKIVKQKA--------------------FERAI 137 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC----HHHHHHHHHHHHHHHHHH--------------------HHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHHHHHH--------------------HHHHH
Confidence 899999999999999999999999999886521 223344566666888899 99999
Q ss_pred HHHHHHHHHHHHhC
Q psy10738 181 KYYEQNLALMKEIN 194 (609)
Q Consensus 181 ~~~~~al~~~~~~~ 194 (609)
.++.++..+.....
T Consensus 138 ~~~~~~~~~~~~~~ 151 (166)
T 1a17_A 138 AGDEHKRSVVDSLD 151 (166)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HcccchHHHhcccc
Confidence 99999888876653
No 127
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.30 E-value=2.8e-11 Score=113.76 Aligned_cols=136 Identities=21% Similarity=0.171 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
...++..|..++..|++++|+..|++++ .+ + +.+++.+|.+|...|++++|+.++++++.+ .+....
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~~~~~~ 72 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQ--DP-H----SRICFNIGCMYTILKNMTEAEKAFTRSINR------DKHLAV 72 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-C----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-C----hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CccchH
Confidence 3456677999999999999999999996 33 2 458999999999999999999999999998 677789
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC----------CcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLN----------DKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEE 171 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~----------d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~ 171 (609)
++.++|.+|...|++++|+.+|++++.+.+... ..+....+++++|.+|...|+
T Consensus 73 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---------------- 136 (213)
T 1hh8_A 73 AYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEE---------------- 136 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTC----------------
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccC----------------
Confidence 999999999999999999999999999877544 444567899999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHH
Q psy10738 172 VKVCLQEAIKYYEQNLALM 190 (609)
Q Consensus 172 ~~~~~~~A~~~~~~al~~~ 190 (609)
+++|+.++++++.+.
T Consensus 137 ----~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 137 ----WKKAEEQLALATSMK 151 (213)
T ss_dssp ----HHHHHHHHHHHHTTC
T ss_pred ----HHHHHHHHHHHHHcC
Confidence 999999999998874
No 128
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.30 E-value=2.1e-12 Score=114.66 Aligned_cols=104 Identities=14% Similarity=0.061 Sum_probs=82.0
Q ss_pred hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHh
Q psy10738 96 KLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVC 175 (609)
Q Consensus 96 ~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (609)
.|....+++.+|.++...|++++|+.+|++++.+.| ....++.++|.+|...|+
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P------~~~~~~~~lg~~~~~~g~-------------------- 85 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDF------YNVDYIMGLAAIYQIKEQ-------------------- 85 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHcc--------------------
Confidence 677778888888888888888888888888888766 456678888888888888
Q ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAR 231 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 231 (609)
|++|+.+|++++.+ .+....+++++|.+|..+|++++|+.+|++++++.+
T Consensus 86 ~~~Ai~~~~~al~l------~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~ 135 (151)
T 3gyz_A 86 FQQAADLYAVAFAL------GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSN 135 (151)
T ss_dssp HHHHHHHHHHHHHH------SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhh------CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 88888888888877 333456788888888888888888888888887653
No 129
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.30 E-value=3.3e-11 Score=103.28 Aligned_cols=130 Identities=40% Similarity=0.675 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
+++.+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++...+ ....
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~ 70 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALEL------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------RSAE 70 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TCHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHc------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC------CchH
Confidence 5677788888888888888888887776 444566777788888888888888888887776543 2345
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIY 221 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 221 (609)
++..+|.++...|+ +++|+.++++++... +....++..+|.++...|++++|+.
T Consensus 71 ~~~~l~~~~~~~~~--------------------~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~ 124 (136)
T 2fo7_A 71 AWYNLGNAYYKQGD--------------------YDEAIEYYQKALELD------PRSAEAWYNLGNAYYKQGDYDEAIE 124 (136)
T ss_dssp HHHHHHHHHHTTTC--------------------HHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHHhcC--------------------HHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHccHHHHHH
Confidence 66777888888887 888888887777652 2224466777777777777777777
Q ss_pred HHHHHHHH
Q psy10738 222 YHQERLKI 229 (609)
Q Consensus 222 ~~~~al~~ 229 (609)
++++++..
T Consensus 125 ~~~~~~~~ 132 (136)
T 2fo7_A 125 YYQKALEL 132 (136)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcc
Confidence 77777654
No 130
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.29 E-value=2.2e-10 Score=114.30 Aligned_cols=232 Identities=10% Similarity=-0.042 Sum_probs=180.5
Q ss_pred HHHHHhcCChH-HHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHcCChh
Q psy10738 29 GERLCKAGDCR-AGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGD----------YQKAMQYHKQDLTLARNMEDKL 97 (609)
Q Consensus 29 g~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~~~d~~ 97 (609)
.......|+++ +|+.++.+++..+|++.. +|+..+.+...++. +++++.++..++.. .|
T Consensus 36 ~~~~~~~~e~s~eaL~~t~~~L~~nP~~yt----aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~------~P 105 (331)
T 3dss_A 36 VFQKRQAGELDESVLELTSQILGANPDFAT----LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV------NP 105 (331)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHTTCTTCHH----HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CT
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHCchhHH----HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh------CC
Confidence 34445678876 799999999999999854 78888888877765 68888999988887 78
Q ss_pred hHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHh
Q psy10738 98 GEAKSSGNLGNTLKVMGK--YDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVC 175 (609)
Q Consensus 98 ~~~~a~~~lg~~~~~~g~--~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (609)
....+|...+.++...|. +++++.++.++++..+ ....++...+.+....|..
T Consensus 106 Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dp------rNy~AW~~R~~vl~~l~~~------------------- 160 (331)
T 3dss_A 106 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADE------RNFHCWDYRRFVAAQAAVA------------------- 160 (331)
T ss_dssp TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCC-------------------
T ss_pred CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhCcC-------------------
Confidence 889999999999999994 8999999999999876 5567899999999998871
Q ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHHHHHhCChHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLL--------------GNFKQAIYYHQERLKIAREFGDKAAERR 241 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~ 241 (609)
++++++++.++++. .+....++.+++.++..+ +.++++++++.+++.+.+....
T Consensus 161 ~~eel~~~~~~I~~------~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~S------ 228 (331)
T 3dss_A 161 PAEELAFTDSLITR------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQS------ 228 (331)
T ss_dssp HHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHH------
T ss_pred HHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHH------
Confidence 48999999999876 455567889999888877 5689999999999998776544
Q ss_pred HHHHHHHHHHHh-----------CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHH
Q psy10738 242 ANSNLGNSHIFL-----------GEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYT---LLRDYPTAIDYHLRHL 307 (609)
Q Consensus 242 ~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~---~~g~~~~A~~~~~~al 307 (609)
+++.+..++... +.++++++++.+.+++.++. ..++..++.+.. ..|..++...++.+.+
T Consensus 229 aW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~------~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~ 302 (331)
T 3dss_A 229 AWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPEN------KWCLLTIILLMRALDPLLYEKETLQYFSTLK 302 (331)
T ss_dssp HHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCccc------chHHHHHHHHHHhhcccccHHHHHHHHHHHH
Confidence 555444444443 45788999999998887753 223333333222 3577888889998888
Q ss_pred HHHHHh
Q psy10738 308 IIAQQL 313 (609)
Q Consensus 308 ~~~~~~ 313 (609)
++.+--
T Consensus 303 ~~Dp~r 308 (331)
T 3dss_A 303 AVDPMR 308 (331)
T ss_dssp HHCGGG
T ss_pred HhCcch
Confidence 876653
No 131
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.29 E-value=1.3e-11 Score=115.92 Aligned_cols=137 Identities=17% Similarity=0.085 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 200 GRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVE 279 (609)
Q Consensus 200 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 279 (609)
...++++|.++...|++++|+.+|++++. . ...++.++|.+|...|++++|+.+|++++.+.+..
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~-----~----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~------ 70 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQD-----P----HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL------ 70 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSS-----C----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcC-----C----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------
Confidence 45678999999999999999999999852 1 23589999999999999999999999999986543
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhc----------chhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLM----------DRVGEGRACWSLGNAHAARGNHEKALYFATKHLEI 349 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l 349 (609)
..++..+|.+|...|++++|+.++++++.+.+... .......++..+|.+|..+|++++|+.++++++++
T Consensus 71 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 71 AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999876544 33445679999999999999999999999999987
Q ss_pred HH
Q psy10738 350 SK 351 (609)
Q Consensus 350 ~~ 351 (609)
..
T Consensus 151 ~p 152 (213)
T 1hh8_A 151 KS 152 (213)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 132
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.29 E-value=3.5e-11 Score=102.96 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 200 GRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVE 279 (609)
Q Consensus 200 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 279 (609)
+..+..+|..++..|++++|+.+|++++.+.+... .++.++|.++...|++++|+.++++++.+.+..
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------ 71 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF------ 71 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc------
Confidence 44566666666666667777666666666544322 366666666666666666666666666655432
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAH 330 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~ 330 (609)
..+++.+|.++...|++++|+.++++++.+.++.........++..++.+.
T Consensus 72 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 72 VRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 455666666666666666666666666666654444344444555554444
No 133
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.29 E-value=6.6e-12 Score=121.90 Aligned_cols=208 Identities=12% Similarity=0.011 Sum_probs=159.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHHcCChh
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQL-------GNAYFYLGDYQKAMQYHKQDLTLARNMEDKL 97 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~l-------g~~~~~~g~~~~A~~~~~~al~~~~~~~d~~ 97 (609)
++-.|.-+ ..+++..|...|.++++.+|+.. .+|..+ +.++...+.+.+++..+.+++.+....-...
T Consensus 10 ~~~~~~~~-~~~d~~~A~~~F~~a~~~dP~~~----Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~ 84 (282)
T 4f3v_A 10 LFESAVSM-LPMSEARSLDLFTEITNYDESAC----DAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNAR 84 (282)
T ss_dssp HHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCE
T ss_pred HHHHHhcc-cCCCHHHHHHHHHHHHHhChhhh----HHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Confidence 33345554 68999999999999999999874 488888 8889898889999999999888643221100
Q ss_pred ---------------hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCC
Q psy10738 98 ---------------GEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQ 162 (609)
Q Consensus 98 ---------------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~ 162 (609)
....+...++.++...|+|++|.+.|...+...+ ... +.+.+|.+++..++
T Consensus 85 ~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p------~~~-~~~~~a~l~~~~~r------- 150 (282)
T 4f3v_A 85 IAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGS------EHL-VAWMKAVVYGAAER------- 150 (282)
T ss_dssp EECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTC------HHH-HHHHHHHHHHHTTC-------
T ss_pred hccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC------chH-HHHHHHHHHHHcCC-------
Confidence 1134556678899999999999999987665222 444 88999999999999
Q ss_pred CCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHH
Q psy10738 163 QDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRA 242 (609)
Q Consensus 163 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 242 (609)
|++|+.+++++... .++.....+++++|.++..+|++++|+.+|++++.- ..++.....+
T Consensus 151 -------------~~dA~~~l~~a~~~----~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g---~~~P~~~~da 210 (282)
T 4f3v_A 151 -------------WTDVIDQVKSAGKW----PDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDS---PAGEACARAI 210 (282)
T ss_dssp -------------HHHHHHHHTTGGGC----SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS---TTTTTTHHHH
T ss_pred -------------HHHHHHHHHHhhcc----CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcC---CCCccccHHH
Confidence 99999999866443 233333568899999999999999999999998731 1102224458
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q psy10738 243 NSNLGNSHIFLGEYQAASEHYKRTLVLAQ 271 (609)
Q Consensus 243 ~~~la~~~~~~g~~~~A~~~~~~al~~~~ 271 (609)
.+++|.++..+|+.++|...|++++...+
T Consensus 211 ~~~~glaL~~lGr~deA~~~l~~a~a~~P 239 (282)
T 4f3v_A 211 AWYLAMARRSQGNESAAVALLEWLQTTHP 239 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 88999999999999999999999888654
No 134
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.28 E-value=7.8e-11 Score=105.51 Aligned_cols=138 Identities=19% Similarity=0.220 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLS 138 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~ 138 (609)
.+..+..+|.+++..|++++|+.++++++.. .+....++..+|.++...|++++|+.++.+++.+.+ .
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~------~ 79 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIEL------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK------K 79 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------T
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc------c
Confidence 4556777777777777777777777777776 455567777777777777777777777777777654 3
Q ss_pred HHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHH
Q psy10738 139 EGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQ 218 (609)
Q Consensus 139 ~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 218 (609)
...+++.+|.++...|+ +++|+.++++++.+.+. ......+..++..+...|++++
T Consensus 80 ~~~~~~~~a~~~~~~~~--------------------~~~A~~~~~~a~~~~p~----~~~~~~~~~~~~~~~~~~~~~~ 135 (166)
T 1a17_A 80 YIKGYYRRAASNMALGK--------------------FRAALRDYETVVKVKPH----DKDAKMKYQECNKIVKQKAFER 135 (166)
T ss_dssp CHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHSTT----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcc--------------------HHHHHHHHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777777777777 77777777777765221 1122233444555666777777
Q ss_pred HHHHHHHHHHHHHH
Q psy10738 219 AIYYHQERLKIARE 232 (609)
Q Consensus 219 A~~~~~~al~~~~~ 232 (609)
|+.++.++..+...
T Consensus 136 A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 136 AIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHcccchHHHhcc
Confidence 77777776666554
No 135
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.28 E-value=1.7e-10 Score=122.22 Aligned_cols=149 Identities=13% Similarity=0.087 Sum_probs=133.4
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHH
Q psy10738 64 SQLGNAYFYLGDYQKAMQYHKQDLTLARNM--EDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSE 139 (609)
Q Consensus 64 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~ 139 (609)
...+..+..+|+|++|+.++++++++..+. .+.+..+.++.+||.+|..+|+|++|+.++++++++.... .+++..
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 344556778999999999999999998765 4678899999999999999999999999999999998876 466789
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHcCCHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI--NDTAAQGRACGNLGNTYYLLGNFK 217 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~ 217 (609)
+..+++||.+|..+|+ |++|+.+|++|+++.... .+++....+..+++.++..++.++
T Consensus 393 a~~l~nLa~~~~~~G~--------------------~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 393 GMAVMRAGLTNWHAGH--------------------IEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999887 577888999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy10738 218 QAIYYHQERLKIARE 232 (609)
Q Consensus 218 ~A~~~~~~al~~~~~ 232 (609)
+|...|.++.+.+.+
T Consensus 453 ~ae~~~~~~~~~~~~ 467 (490)
T 3n71_A 453 QNEFMYHKMREAALN 467 (490)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998776533
No 136
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.27 E-value=2.2e-11 Score=118.20 Aligned_cols=208 Identities=10% Similarity=-0.051 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHH-------HHHHHHcCCHHHHHHHHHHHHHHHHHcC
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNL-------GNTLKVMGKYDEAMVCCKRHLEISRQLN 134 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~l-------g~~~~~~g~~~~A~~~~~~al~l~~~~~ 134 (609)
-++..|.-+ ..+++..|...|.+++.+ .|..+.+|..+ +.++...+++.+++..+.+++.+.+..-
T Consensus 9 ~~~~~~~~~-~~~d~~~A~~~F~~a~~~------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l 81 (282)
T 4f3v_A 9 SLFESAVSM-LPMSEARSLDLFTEITNY------DESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTL 81 (282)
T ss_dssp HHHHHHHHH-TTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGG
T ss_pred HHHHHHhcc-cCCCHHHHHHHHHHHHHh------ChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence 345555555 589999999999999999 99999999999 8999999999999999999998766432
Q ss_pred CcH---------------HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHH
Q psy10738 135 DKL---------------SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQ 199 (609)
Q Consensus 135 d~~---------------~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 199 (609)
... ....+...++.++...|+ |++|.+.|...+.. .+..
T Consensus 82 ~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~--------------------y~eA~~~l~~~~~~------~p~~ 135 (282)
T 4f3v_A 82 NARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGN--------------------YADAMEALEAAPVA------GSEH 135 (282)
T ss_dssp CCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTC--------------------HHHHHHHHTSSCCT------TCHH
T ss_pred hhhhccCCcccccccccCCHhHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHhc------CCch
Confidence 211 124456667788888888 88888877765542 2333
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 200 GRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVE 279 (609)
Q Consensus 200 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 279 (609)
. +.+.+|.+++..|+|++|+.+++++... .++.....+++++|.++..+|++++|+.+|++++.-. .++...
T Consensus 136 ~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~----~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~---~~P~~~ 207 (282)
T 4f3v_A 136 L-VAWMKAVVYGAAERWTDVIDQVKSAGKW----PDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSP---AGEACA 207 (282)
T ss_dssp H-HHHHHHHHHHHTTCHHHHHHHHTTGGGC----SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTST---TTTTTH
T ss_pred H-HHHHHHHHHHHcCCHHHHHHHHHHhhcc----CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCC---CCcccc
Confidence 3 7777888888888888888888755332 1222233466777777777777777777777665210 002113
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIA 310 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 310 (609)
..+.+.+|.++..+|+.++|...|++++...
T Consensus 208 ~da~~~~glaL~~lGr~deA~~~l~~a~a~~ 238 (282)
T 4f3v_A 208 RAIAWYLAMARRSQGNESAAVALLEWLQTTH 238 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 4456666666666666666666666666543
No 137
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.27 E-value=2.1e-10 Score=121.49 Aligned_cols=147 Identities=16% Similarity=0.115 Sum_probs=131.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIK 181 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~ 181 (609)
...+..+..+|+|++|+..+++++++.... .+.+..+.++.+||.+|..+|+ |++|+.
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~--------------------~~eA~~ 372 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQA--------------------YEEASH 372 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTC--------------------HHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcC--------------------HHHHHH
Confidence 344556778999999999999999998765 3566889999999999999999 999999
Q ss_pred HHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHhCCHH
Q psy10738 182 YYEQNLALMKEI--NDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREF--GDKAAERRANSNLGNSHIFLGEYQ 257 (609)
Q Consensus 182 ~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~ 257 (609)
++++++++.+.. .+++..+..+++||.+|..+|++++|+.+|++|+++.... .+.+..+....+++.++..++.++
T Consensus 373 ~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 373 YARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887 6778999999999999999999999999999999999884 456777888899999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy10738 258 AASEHYKRTLVLA 270 (609)
Q Consensus 258 ~A~~~~~~al~~~ 270 (609)
+|...|.++.+.+
T Consensus 453 ~ae~~~~~~~~~~ 465 (490)
T 3n71_A 453 QNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987655
No 138
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.27 E-value=1.4e-10 Score=99.30 Aligned_cols=128 Identities=35% Similarity=0.609 Sum_probs=113.6
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHH
Q psy10738 26 ALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGN 105 (609)
Q Consensus 26 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~ 105 (609)
...|..+...|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+....++..
T Consensus 5 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~ 74 (136)
T 2fo7_A 5 YNLGNAYYKQGDYDEAIEYYQKALELDPRSA----EAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPRSAEAWYN 74 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHcCCcch----hHHHHHHHHHHHhcCHHHHHHHHHHHHHH------CCCchHHHHH
Confidence 4458899999999999999999999988764 47888999999999999999999999987 5556778999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHH
Q psy10738 106 LGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQ 185 (609)
Q Consensus 106 lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 185 (609)
+|.++...|++++|+.++++++...+ ....++..+|.++...|+ +++|..++++
T Consensus 75 l~~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~la~~~~~~~~--------------------~~~A~~~~~~ 128 (136)
T 2fo7_A 75 LGNAYYKQGDYDEAIEYYQKALELDP------RSAEAWYNLGNAYYKQGD--------------------YDEAIEYYQK 128 (136)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHTTTC--------------------HHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCC------CChHHHHHHHHHHHHHcc--------------------HHHHHHHHHH
Confidence 99999999999999999999998754 335678899999999999 9999999999
Q ss_pred HHHH
Q psy10738 186 NLAL 189 (609)
Q Consensus 186 al~~ 189 (609)
++..
T Consensus 129 ~~~~ 132 (136)
T 2fo7_A 129 ALEL 132 (136)
T ss_dssp HHHH
T ss_pred HHcc
Confidence 8875
No 139
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.24 E-value=2.2e-11 Score=107.81 Aligned_cols=114 Identities=18% Similarity=0.137 Sum_probs=83.4
Q ss_pred HHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHH
Q psy10738 42 VAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMV 121 (609)
Q Consensus 42 ~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~ 121 (609)
-..|++++..+|++ ..+++.+|.+++..|++++|+..|++++.. .+....+++.+|.++...|++++|+.
T Consensus 7 ~~~~~~al~~~p~~----~~~~~~~g~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~ 76 (148)
T 2vgx_A 7 GGTIAMLNEISSDT----LEQLYSLAFNQYQSGXYEDAHXVFQALCVL------DHYDSRFFLGLGACRQAMGQYDLAIH 76 (148)
T ss_dssp CCSHHHHTTCCHHH----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hhhHHHHHcCCHhh----HHHHHHHHHHHHHcCChHHHHHHHHHHHHc------CcccHHHHHHHHHHHHHHhhHHHHHH
Confidence 34566677766655 336677777888888888888888877777 66667777778888888888888888
Q ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHH
Q psy10738 122 CCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMK 191 (609)
Q Consensus 122 ~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 191 (609)
+|++++.+.+ ....+++++|.+|...|+ +++|+.+|++++++.+
T Consensus 77 ~~~~al~l~p------~~~~~~~~lg~~~~~~g~--------------------~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 77 SYSYGAVMDI------XEPRFPFHAAECLLQXGE--------------------LAEAESGLFLAQELIA 120 (148)
T ss_dssp HHHHHHHHST------TCTHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCC------CCchHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHHCc
Confidence 8887777765 334567777888888887 7888888877777654
No 140
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.24 E-value=2.6e-10 Score=100.32 Aligned_cols=114 Identities=18% Similarity=0.110 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCc-------chh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 21 MCLELALEGERLCKAGDCRAGVAFFQAAIQAGTD-------DLR-TLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARN 92 (609)
Q Consensus 21 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-------~~~-~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 92 (609)
.+..+...|..++..|+|++|+..|++|+++.|+ +.. ..+.+|.++|.++..+|+|++|+.++.++++++..
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4567778899999999999999999999999998 321 23459999999999999999999999999998443
Q ss_pred -cCChhhHHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Q psy10738 93 -MEDKLGEAKSS----GNLGNTLKVMGKYDEAMVCCKRHLEISRQLN 134 (609)
Q Consensus 93 -~~d~~~~~~a~----~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 134 (609)
..-.|..+.+| +++|.++..+|++++|+.+|++++++.+...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 23345677788 9999999999999999999999999998653
No 141
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.23 E-value=1.4e-10 Score=102.00 Aligned_cols=117 Identities=11% Similarity=0.071 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC------ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 199 QGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFG------DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 272 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 272 (609)
.+..+.++|..+...|+|++|+..|++++++.+... .....+.+|.++|.++..+|+|++|+..+.++++++..
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 466788999999999999999999999999988732 12234559999999999999999999999999998322
Q ss_pred cC-CcHHHHHHH----HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcc
Q psy10738 273 LG-DRAVEAQAC----YSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMD 315 (609)
Q Consensus 273 ~~-~~~~~~~~~----~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 315 (609)
.. -.+..+.+| +++|.++..+|++++|+..|++++++.++-..
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~ 137 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG 137 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH
Confidence 21 111246677 99999999999999999999999999887543
No 142
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.23 E-value=8.7e-12 Score=116.17 Aligned_cols=160 Identities=15% Similarity=0.018 Sum_probs=114.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcH-----
Q psy10738 63 YSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKL----- 137 (609)
Q Consensus 63 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~----- 137 (609)
....+......|.+++|.+.+...... ....+..+..+|..+...|++++|+.+|.+++.+.+...+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 80 (198)
T 2fbn_A 7 HHHHSSGRENLYFQGAKKSIYDYTDEE------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILL 80 (198)
T ss_dssp ---------------CCCSGGGCCHHH------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHH
T ss_pred ccchhhhhhhhhhccccCchhhCCHHH------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 344566677788888888887766555 566788899999999999999999999999998766433211
Q ss_pred -----HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10738 138 -----SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL 212 (609)
Q Consensus 138 -----~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~ 212 (609)
....++.++|.+|...|+ +++|+.++++++.+ .+....+++++|.+|..
T Consensus 81 ~~~~~~~~~~~~~la~~~~~~~~--------------------~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~ 134 (198)
T 2fbn_A 81 DKKKNIEISCNLNLATCYNKNKD--------------------YPKAIDHASKVLKI------DKNNVKALYKLGVANMY 134 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH------STTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--------------------HHHHHHHHHHHHHh------CcccHHHHHHHHHHHHH
Confidence 124788899999999999 99999999999887 33446788999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHH
Q psy10738 213 LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAAS 260 (609)
Q Consensus 213 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 260 (609)
+|++++|+.+|++++.+.+... .++..++.++...++..++.
T Consensus 135 ~~~~~~A~~~~~~al~~~p~~~------~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 135 FGFLEEAKENLYKAASLNPNNL------DIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCH------HHHHHHHHHHHHHHHHHC--
T ss_pred cccHHHHHHHHHHHHHHCCCcH------HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988765432 37778888888887777665
No 143
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.21 E-value=9.9e-12 Score=115.81 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIK 181 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~ 181 (609)
.....+......|.+++|.+.+........ ..+..+..+|.++...|+ |++|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~--------------------~~~A~~ 59 (198)
T 2fbn_A 6 HHHHHSSGRENLYFQGAKKSIYDYTDEEKV------QSAFDIKEEGNEFFKKNE--------------------INEAIV 59 (198)
T ss_dssp ----------------CCCSGGGCCHHHHH------HHHHHHHHHHHHHHHTTC--------------------HHHHHH
T ss_pred cccchhhhhhhhhhccccCchhhCCHHHHH------HHHHHHHHHHHHHHHcCC--------------------HHHHHH
Confidence 344566777788888888888876554433 667889999999999999 999999
Q ss_pred HHHHHHHHHHHhCCh----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy10738 182 YYEQNLALMKEINDT----------AAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHI 251 (609)
Q Consensus 182 ~~~~al~~~~~~~~~----------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 251 (609)
+|.+++.+.+...+. .....++.++|.+|...|++++|+.++++++.+.+.. ..+++.+|.+|.
T Consensus 60 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~ 133 (198)
T 2fbn_A 60 KYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN------VKALYKLGVANM 133 (198)
T ss_dssp HHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc------HHHHHHHHHHHH
Confidence 999999875433211 1124677888888888888888888888888774432 237778888888
Q ss_pred HhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHH
Q psy10738 252 FLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAI 300 (609)
Q Consensus 252 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 300 (609)
.+|++++|+.+|++++.+.+.. ..++..++.++...++..++.
T Consensus 134 ~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 134 YFGFLEEAKENLYKAASLNPNN------LDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTC------HHHHHHHHHHHHHHHHHHC--
T ss_pred HcccHHHHHHHHHHHHHHCCCc------HHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888776543 556777777777777666665
No 144
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.20 E-value=1.7e-11 Score=130.13 Aligned_cols=152 Identities=18% Similarity=0.156 Sum_probs=117.5
Q ss_pred HhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---------cHHHHHH
Q psy10738 72 YLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLND---------KLSEGRA 142 (609)
Q Consensus 72 ~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d---------~~~~~~~ 142 (609)
.++++++|+..+..++.. .+..+.++..+|.++...|+|++|+.+|.+++.+.+.... ......+
T Consensus 246 ~l~~~~~A~~~~~~~~~~------~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~ 319 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE------KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAA 319 (457)
T ss_dssp EEEEEECCCCGGGSCHHH------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHH------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHH
Confidence 345677888888887777 6778899999999999999999999999999998875421 1233677
Q ss_pred HHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHH
Q psy10738 143 LYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYY 222 (609)
Q Consensus 143 ~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 222 (609)
++++|.+|..+|+ |++|+.+|++++.+ .+....+++++|.+|..+|++++|+.+
T Consensus 320 ~~nla~~~~~~g~--------------------~~~A~~~~~~al~~------~p~~~~a~~~~g~a~~~~g~~~~A~~~ 373 (457)
T 1kt0_A 320 FLNLAMCYLKLRE--------------------YTKAVECCDKALGL------DSANEKGLYRRGEAQLLMNEFESAKGD 373 (457)
T ss_dssp HHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhcC--------------------HHHHHHHHHHHHhc------CCccHHHHHHHHHHHHHccCHHHHHHH
Confidence 8888888888888 88888888888877 334466788888888888888888888
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHH
Q psy10738 223 HQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASE 261 (609)
Q Consensus 223 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 261 (609)
|++++++.+.... ++.+++.++...+++++|..
T Consensus 374 ~~~al~l~P~~~~------a~~~l~~~~~~~~~~~~a~~ 406 (457)
T 1kt0_A 374 FEKVLEVNPQNKA------ARLQISMCQKKAKEHNERDR 406 (457)
T ss_dssp HHHHHTTC----C------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHH------HHHHHHHHHHHHHHHHHHHH
Confidence 8888887766655 77788888888887776654
No 145
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.20 E-value=6.3e-11 Score=117.06 Aligned_cols=193 Identities=14% Similarity=0.114 Sum_probs=138.9
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|..++..|++++|+..|++++...|.+. .++..+|.+|...|++++|+..+++++.+ .+....++
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~ 75 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA----VYYTNRALCYLKMQQPEQALADCRRALEL------DGQSVKAH 75 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHTTS------CTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH----HHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCCHHHH
Confidence 456679999999999999999999999999874 48899999999999999999999999988 77788999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYY 183 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 183 (609)
+++|.+|...|++++|+.+|++++.+.+....... ........ ..++..+.
T Consensus 76 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~------~~~~~~~~-----------------------~~~~~~~~ 126 (281)
T 2c2l_A 76 FFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFG------DDIPSALR-----------------------IAKKKRWN 126 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCC------SHHHHHHH-----------------------HHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHH------HHHHHHHH-----------------------HHHHHHHH
Confidence 99999999999999999999999999886532211 01111111 11111111
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh-CCHHHHHHH
Q psy10738 184 EQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFL-GEYQAASEH 262 (609)
Q Consensus 184 ~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~ 262 (609)
.... ....... .+...++.++ .|++++|++.++++++..+... .....++.++... +.+++|...
T Consensus 127 ~~~~---~~~~~~~---~i~~~l~~l~--~~~~~~A~~~~~~al~~~p~~~------~~~~~l~~~~~~~~~~~~~a~~~ 192 (281)
T 2c2l_A 127 SIEE---RRIHQES---ELHSYLTRLI--AAERERELEECQRNHEGHEDDG------HIRAQQACIEAKHDKYMADMDEL 192 (281)
T ss_dssp HHHH---TCCCCCC---HHHHHHHHHH--HHHHHHHHTTTSGGGTTTSCHH------HHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH---HHHhhhH---HHHHHHHHHH--HHHHHHHHHHHHhhhccccchh------hhhhHHHHHHHHHHHHHHHHHHH
Confidence 1111 0111112 1233334433 6899999999999998854221 2444455555555 889999999
Q ss_pred HHHHHHH
Q psy10738 263 YKRTLVL 269 (609)
Q Consensus 263 ~~~al~~ 269 (609)
|.++.+.
T Consensus 193 f~~a~~~ 199 (281)
T 2c2l_A 193 FSQVDEK 199 (281)
T ss_dssp HHHSSCT
T ss_pred HHhhhcc
Confidence 9988864
No 146
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.20 E-value=2.4e-11 Score=107.64 Aligned_cols=114 Identities=13% Similarity=0.074 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCC
Q psy10738 82 YHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVG 161 (609)
Q Consensus 82 ~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~ 161 (609)
.+++++.+ .+....+++.+|.++...|++++|+.+|++++.+.+ ....+++++|.+|...|+
T Consensus 9 ~~~~al~~------~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~------ 70 (148)
T 2vgx_A 9 TIAMLNEI------SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH------YDSRFFLGLGACRQAMGQ------ 70 (148)
T ss_dssp SHHHHTTC------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC------
T ss_pred hHHHHHcC------CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc------ccHHHHHHHHHHHHHHhh------
Confidence 45555555 677778888888888888888888888888887765 446677888888888888
Q ss_pred CCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q psy10738 162 QQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREF 233 (609)
Q Consensus 162 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 233 (609)
+++|+.+|++++.+ .+....+++++|.+|..+|++++|+.+|++++++.+..
T Consensus 71 --------------~~~A~~~~~~al~l------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 71 --------------YDLAIHSYSYGAVM------DIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp --------------HHHHHHHHHHHHHH------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred --------------HHHHHHHHHHHHhc------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 88888888888877 33345678888888888888888888888888877653
No 147
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.19 E-value=2.6e-10 Score=97.75 Aligned_cols=119 Identities=20% Similarity=0.268 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHH
Q psy10738 21 MCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEA 100 (609)
Q Consensus 21 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~ 100 (609)
....+...|..++..|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~ 84 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDA----KLYSNRAACYTKLLEFQLALKDCEECIQL------EPTFI 84 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCH----HHHHHHHHHHTTTTCHHHHHHHHHHHHHH------CTTCH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH----HHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCCch
Confidence 345666779999999999999999999999999874 48899999999999999999999999998 66678
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHccc
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~ 155 (609)
.++..+|.++...|++++|+.++++++.+.+ ....++..++.++...|+
T Consensus 85 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p------~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 85 KGYTRKAAALEAMKDYTKAMDVYQKALDLDS------SCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG------GGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC------CchHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999998866 345678888988887764
No 148
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.18 E-value=2.8e-10 Score=102.35 Aligned_cols=104 Identities=16% Similarity=0.154 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
...+...|..++..|+|++|+.+|+++++..|.+. .+++.+|.+|...|++++|+.++++++.+ .+....
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~ 80 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP----IYLSNRAAAYSASGQHEKAAEDAELATVV------DPKYSK 80 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHH
Confidence 44566789999999999999999999999999874 48999999999999999999999999999 777899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLND 135 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d 135 (609)
+++++|.+|..+|++++|+.+|++++++.+....
T Consensus 81 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 81 AWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 9999999999999999999999999999875443
No 149
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.18 E-value=2.4e-10 Score=102.80 Aligned_cols=108 Identities=19% Similarity=0.203 Sum_probs=75.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHh
Q psy10738 96 KLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVC 175 (609)
Q Consensus 96 ~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (609)
.+..+.+++.+|.++...|++++|+.+|++++.+.+ ....+++++|.+|...|+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~l~~~~~~~g~-------------------- 60 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP------ANPIYLSNRAAAYSASGQ-------------------- 60 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHTTC--------------------
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------cCHHHHHHHHHHHHHccC--------------------
Confidence 445566777777777777777777777777777655 335567777777777777
Q ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC
Q psy10738 176 LQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGD 235 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 235 (609)
+++|+.+|++++.+ .+....++.++|.+|..+|++++|+.+|++++++.+....
T Consensus 61 ~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 61 HEKAAEDAELATVV------DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 77777777777766 2334566777777777777777777777777777666554
No 150
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.17 E-value=1e-10 Score=106.56 Aligned_cols=126 Identities=17% Similarity=0.252 Sum_probs=108.2
Q ss_pred HHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHH-
Q psy10738 31 RLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNT- 109 (609)
Q Consensus 31 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~- 109 (609)
.+...|++++|+..|+++++..|.+. .++..+|.+|...|++++|+.++++++.+ .+....++..+|.+
T Consensus 19 ~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~l 88 (177)
T 2e2e_A 19 QFASQQNPEAQLQALQDKIRANPQNS----EQWALLGEYYLWQNDYSNSLLAYRQALQL------RGENAELYAALATVL 88 (177)
T ss_dssp CCC-----CCCCHHHHHHHHHCCSCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HCSCHHHHHHHHHHH
T ss_pred hhhhccCHHHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHH
Confidence 34567899999999999999999875 48899999999999999999999999998 56668899999999
Q ss_pred HHHcCCH--HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHH
Q psy10738 110 LKVMGKY--DEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNL 187 (609)
Q Consensus 110 ~~~~g~~--~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 187 (609)
+...|++ ++|+.++++++.+.+ ....+++.+|.+|...|+ +++|+.++++++
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~--------------------~~~A~~~~~~al 142 (177)
T 2e2e_A 89 YYQASQHMTAQTRAMIDKALALDS------NEITALMLLASDAFMQAN--------------------YAQAIELWQKVM 142 (177)
T ss_dssp HHHTTTCCCHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHccc--------------------HHHHHHHHHHHH
Confidence 8899999 999999999998865 445789999999999999 999999999999
Q ss_pred HHHHH
Q psy10738 188 ALMKE 192 (609)
Q Consensus 188 ~~~~~ 192 (609)
.+.+.
T Consensus 143 ~~~p~ 147 (177)
T 2e2e_A 143 DLNSP 147 (177)
T ss_dssp HTCCT
T ss_pred hhCCC
Confidence 87443
No 151
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.16 E-value=2.1e-11 Score=129.38 Aligned_cols=152 Identities=14% Similarity=0.162 Sum_probs=122.2
Q ss_pred cCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC---------ChhhHHHHHHH
Q psy10738 35 AGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNME---------DKLGEAKSSGN 105 (609)
Q Consensus 35 ~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---------d~~~~~~a~~~ 105 (609)
.+++++|+..|+.++...|.. +..+..+|.+++..|+|++|+.+|++++.+..... ..+....++.+
T Consensus 247 l~~~~~A~~~~~~~~~~~~~~----a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~n 322 (457)
T 1kt0_A 247 LKSFEKAKESWEMDTKEKLEQ----AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 322 (457)
T ss_dssp EEEEECCCCGGGSCHHHHHHH----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCcchhhcCHHHHHHH----HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHH
Confidence 345566777776666655543 56888999999999999999999999998844321 12233789999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHH
Q psy10738 106 LGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQ 185 (609)
Q Consensus 106 lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 185 (609)
+|.+|..+|++++|+.+|++++.+.+ ....+++++|.+|..+|+ +++|+.+|++
T Consensus 323 la~~~~~~g~~~~A~~~~~~al~~~p------~~~~a~~~~g~a~~~~g~--------------------~~~A~~~~~~ 376 (457)
T 1kt0_A 323 LAMCYLKLREYTKAVECCDKALGLDS------ANEKGLYRRGEAQLLMNE--------------------FESAKGDFEK 376 (457)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCC------ccHHHHHHHHHHHHHccC--------------------HHHHHHHHHH
Confidence 99999999999999999999999876 457799999999999999 9999999999
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHH
Q psy10738 186 NLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYY 222 (609)
Q Consensus 186 al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 222 (609)
++++ .+....++.+++.++..+|++++|...
T Consensus 377 al~l------~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 377 VLEV------NPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHTT------C----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHh------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 445557899999999999999887653
No 152
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.16 E-value=7.2e-11 Score=103.56 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
.++.+|.+++..|++++|+.+|++++.. .|....++..+|.++...|++++|+.+|++++.+.+ ....
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~ 87 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCML------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI------NEPR 87 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCTH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC------CCcH
Confidence 4445555555555555555555555554 444445555555555555555555555555555443 2223
Q ss_pred HHHHHHHHHHHccc
Q psy10738 142 ALYNLGNVYHAKGK 155 (609)
Q Consensus 142 ~~~~lg~~~~~~g~ 155 (609)
+++++|.+|...|+
T Consensus 88 ~~~~lg~~~~~~g~ 101 (142)
T 2xcb_A 88 FPFHAAECHLQLGD 101 (142)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 44555555555555
No 153
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.15 E-value=1e-09 Score=93.31 Aligned_cols=119 Identities=24% Similarity=0.295 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHH
Q psy10738 21 MCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEA 100 (609)
Q Consensus 21 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~ 100 (609)
....+...|..++..|++++|+.+|++++...|.+. .++..+|.++...|++++|+.++++++.. .+...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~ 80 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANA----VYFCNRAAAYSKLGNYAGAVQDCERAICI------DPAYS 80 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCH----HHHHHHHHHHHHhhchHHHHHHHHHHHhc------CccCH
Confidence 345566779999999999999999999999998874 48899999999999999999999999998 56668
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHccc
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~ 155 (609)
.++..+|.++...|++++|+.++++++.+.+ ....++..+|.++...|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p------~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 81 KAYGRMGLALSSLNKHVEAVAYYKKALELDP------DNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------TCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc------cchHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999998865 345688899999998887
No 154
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.14 E-value=7.2e-10 Score=97.08 Aligned_cols=101 Identities=20% Similarity=0.167 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
-.++..|..++..|++++|+..|++++..+|.++. +++.+|.++...|++++|+.+|++++.+ .+....+
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~ 88 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDAR----YFLGLGACRQSLGLYEQALQSYSYGALM------DINEPRF 88 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCTHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHH----HHHHHHHHHHHHhhHHHHHHHHHHHHhc------CCCCcHH
Confidence 44566799999999999999999999999998854 8899999999999999999999999999 7778889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEISRQL 133 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 133 (609)
++++|.+|...|++++|+.+|++++.+.+..
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 89 PFHAAECHLQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999998843
No 155
>2om2_B Regulator of G-protein signalling 14 goloco motif peptide; arginine finger, RGS14 goloco, signaling protein; HET: GDP; 2.20A {Homo sapiens} PDB: 1kjy_B* 3onw_C* 3qi2_C*
Probab=99.14 E-value=1.4e-11 Score=75.02 Aligned_cols=26 Identities=42% Similarity=0.466 Sum_probs=23.8
Q ss_pred cchHHHHHhhhccCCCcccccCcccc
Q psy10738 443 EESFFELLSRFQSERMDDQRCSLSAR 468 (609)
Q Consensus 443 ~~~f~~ll~~~q~~rmddqr~~~~~~ 468 (609)
.|+|||||+|+||+|||||||.+...
T Consensus 2 ~e~ffdLLSR~Qs~R~dDQR~~l~~~ 27 (36)
T 2om2_B 2 IEGLVELLNRVQSSGAHDQRGLLRKE 27 (36)
T ss_dssp CHHHHHHHHHHHTCSCCSCSSSCCTT
T ss_pred chHHHHHHHHhccCcccccccccccc
Confidence 58999999999999999999999753
No 156
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.14 E-value=2.2e-11 Score=120.33 Aligned_cols=194 Identities=15% Similarity=0.032 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHH
Q psy10738 100 AKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEA 179 (609)
Q Consensus 100 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A 179 (609)
+.++..+|..+...|++++|+.+|.+++.+.+ ....+++++|.+|...|+ +++|
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~~~--------------------~~~A 57 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP------LVAVYYTNRALCYLKMQQ--------------------PEQA 57 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS------CCHHHHHHHHHHHHHTTC--------------------HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHhcC--------------------HHHH
Confidence 34455555555555555555555555555433 233455555555555555 5555
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 180 IKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAA 259 (609)
Q Consensus 180 ~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 259 (609)
+..+++++++ .+....+++++|.+|..+|++++|+.+|++++.+.+....... ........ ..++
T Consensus 58 ~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~------~~~~~~~~---~~~~ 122 (281)
T 2c2l_A 58 LADCRRALEL------DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFG------DDIPSALR---IAKK 122 (281)
T ss_dssp HHHHHHHTTS------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCC------SHHHHHHH---HHHH
T ss_pred HHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHH------HHHHHHHH---HHHH
Confidence 5555555544 2223445556666666666666666666666665554322100 00000000 0011
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHc-CChHH
Q psy10738 260 SEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAAR-GNHEK 338 (609)
Q Consensus 260 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~-g~~~~ 338 (609)
..+...... ..... ..+...++.++ .|++++|++.++++++..+.... ....++.++... +.+++
T Consensus 123 ~~~~~~~~~---~~~~~---~~i~~~l~~l~--~~~~~~A~~~~~~al~~~p~~~~------~~~~l~~~~~~~~~~~~~ 188 (281)
T 2c2l_A 123 KRWNSIEER---RIHQE---SELHSYLTRLI--AAERERELEECQRNHEGHEDDGH------IRAQQACIEAKHDKYMAD 188 (281)
T ss_dssp HHHHHHHHT---CCCCC---CHHHHHHHHHH--HHHHHHHHTTTSGGGTTTSCHHH------HTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHhhh---HHHHHHHHHHH--HHHHHHHHHHHHhhhccccchhh------hhhHHHHHHHHHHHHHHH
Confidence 111110000 00110 11222233332 56777777777776665544322 222334444443 77778
Q ss_pred HHHHHHHHHH
Q psy10738 339 ALYFATKHLE 348 (609)
Q Consensus 339 A~~~~~~al~ 348 (609)
|...|.++.+
T Consensus 189 a~~~f~~a~~ 198 (281)
T 2c2l_A 189 MDELFSQVDE 198 (281)
T ss_dssp HHHHHHHSSC
T ss_pred HHHHHHhhhc
Confidence 8888888886
No 157
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.14 E-value=4e-10 Score=101.09 Aligned_cols=105 Identities=21% Similarity=0.177 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC------------hhhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMED------------KLGEAKSSGNLGNTLKVMGKYDEAMVCCKRH 126 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d------------~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 126 (609)
.+..+..+|..++..|+|++|+.+|.+++.+...... .+....++.++|.+|..+|++++|+.++.++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3556777777777777777777777777776543311 3444566666666666666666666666666
Q ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHH
Q psy10738 127 LEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 127 l~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 189 (609)
+.+.+ ....+++.+|.+|...|+ +++|+..|++++.+
T Consensus 90 l~~~p------~~~~a~~~~g~~~~~~g~--------------------~~~A~~~~~~al~l 126 (162)
T 3rkv_A 90 LKREE------TNEKALFRRAKARIAAWK--------------------LDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHST------TCHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH
T ss_pred HhcCC------cchHHHHHHHHHHHHHhc--------------------HHHHHHHHHHHHhc
Confidence 66644 344566666666666666 66666666666665
No 158
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.14 E-value=1e-09 Score=98.29 Aligned_cols=123 Identities=16% Similarity=0.161 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHh--------CCcc------hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQA--------GTDD------LRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDL 87 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~--------~~~~------~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al 87 (609)
+..+...|..++..|+|++|+..|.+++.. .|.+ ......++.++|.+|..+|++++|+.++.+++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 445667799999999999999999999998 3332 22346789999999999999999999999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHccc
Q psy10738 88 TLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 88 ~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~ 155 (609)
.+ .+..+.+++.+|.+|..+|++++|+.+|++++.+.+.. ...+...++.+....++
T Consensus 91 ~~------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~-----~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 91 KR------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAA-----ASVVAREMKIVTERRAE 147 (162)
T ss_dssp HH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG-----HHHHHHHHHHHHHHHHH
T ss_pred hc------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHHHH
Confidence 99 78889999999999999999999999999999997621 11345555555555443
No 159
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.12 E-value=7.2e-10 Score=94.35 Aligned_cols=118 Identities=20% Similarity=0.272 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
..++..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++.+++...+ ..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~ 79 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIEL------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDP------AY 79 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TC
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc------cC
Confidence 445566666666666666666666666655 344455566666666666666666666666665433 22
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN 215 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 215 (609)
..++..+|.++...|+ +++|+.++++++.+. +....++..+|.++...|+
T Consensus 80 ~~~~~~~~~~~~~~~~--------------------~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 80 SKAYGRMGLALSSLNK--------------------HVEAVAYYKKALELD------PDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCC--------------------HHHHHHHHHHHHhcC------ccchHHHHHHHHHHHHHhc
Confidence 3455666666666666 666666666655541 1223355555555555554
No 160
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.11 E-value=4.6e-10 Score=95.48 Aligned_cols=98 Identities=14% Similarity=0.046 Sum_probs=88.5
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
.+..|..+...|++++|+..|+++++.+|++.. +++.+|.++...|++++|+..+++++++ .|....++.
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~----a~~~lg~~~~~~g~~~~A~~~~~~al~l------~P~~~~~~~ 89 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREE----AWRSLGLTQAENEKDGLAIIALNHARML------DPKDIAVHA 89 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHH
Confidence 456799999999999999999999999998854 8899999999999999999999999999 788889999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQ 132 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~ 132 (609)
.+|.++...|++++|+.++++++++.+.
T Consensus 90 ~la~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 90 ALAVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 9999999999999999999999987763
No 161
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.11 E-value=1.6e-09 Score=93.62 Aligned_cols=100 Identities=22% Similarity=0.271 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
..+...|..++..|++++|+.+|++++...|.+. .++..+|.++...|++++|+.++++++.+ .+....+
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~ 79 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA----VYYTNRALCYLKMQQPEQALADCRRALEL------DGQSVKA 79 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH----HHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CchhHHH
Confidence 4556679999999999999999999999999874 48999999999999999999999999998 6778899
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEISRQ 132 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 132 (609)
++.+|.++...|++++|+.+|++++.+.+.
T Consensus 80 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 80 HFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 999999999999999999999999999986
No 162
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.10 E-value=4.6e-10 Score=96.18 Aligned_cols=117 Identities=16% Similarity=0.206 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
...+..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+ ..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~------~~ 83 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKR------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP------TF 83 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTT------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT------TC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC------Cc
Confidence 456666677777777777777777766665 444456666666666666666666666666666543 23
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG 214 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 214 (609)
..++..+|.++...|+ +++|+.++++++.+. +....++..++.++...|
T Consensus 84 ~~~~~~la~~~~~~~~--------------------~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 84 IKGYTRKAAALEAMKD--------------------YTKAMDVYQKALDLD------SSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHC------GGGTHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHhC------CCchHHHHHHHHHHHHhc
Confidence 4466666666666666 666666666666552 222345556666665544
No 163
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.10 E-value=3.2e-10 Score=113.65 Aligned_cols=236 Identities=7% Similarity=-0.044 Sum_probs=175.7
Q ss_pred HHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHH
Q psy10738 32 LCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLG-DYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTL 110 (609)
Q Consensus 32 ~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~ 110 (609)
....+..++|+.++.++|..+|++.. +++..+.+...+| .+++++.++..++.. .+....++...+.++
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~~yt----aWn~R~~iL~~l~~~l~eEL~~~~~~L~~------nPKny~aW~hR~wlL 133 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPAHYT----VWQYRFSLLTSLNKSLEDELRLMNEFAVQ------NLKSYQVWHHRLLLL 133 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHTTCCHHHHHHHHHHHHHT------TCCCHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHhCchhHH----HHHHHHHHHHHhhhhHHHHHHHHHHHHHh------CCCcHHHHHHHHHHH
Confidence 34445567899999999999999854 8999999999999 599999999999988 888899999999999
Q ss_pred HHc-C-CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHH
Q psy10738 111 KVM-G-KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLA 188 (609)
Q Consensus 111 ~~~-g-~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 188 (609)
... + ++++++.++.++++..+ ....++...+.+....|.+. ......+.++++++.++++
T Consensus 134 ~~l~~~~~~~EL~~~~k~L~~dp------kNy~AW~~R~wvl~~l~~~~------------~~~~~~~~eELe~~~k~I~ 195 (349)
T 3q7a_A 134 DRISPQDPVSEIEYIHGSLLPDP------KNYHTWAYLHWLYSHFSTLG------------RISEAQWGSELDWCNEMLR 195 (349)
T ss_dssp HHHCCSCCHHHHHHHHHHTSSCT------TCHHHHHHHHHHHHHHHHTT------------CCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCChHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcccc------------ccchhhHHHHHHHHHHHHH
Confidence 998 8 89999999999987655 55678889999998888710 0011223489999999888
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHH---
Q psy10738 189 LMKEINDTAAQGRACGNLGNTYYLLGN-------FKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQA--- 258 (609)
Q Consensus 189 ~~~~~~~~~~~~~~~~~lg~~~~~~g~-------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~--- 258 (609)
. .+....++++.+.+...++. ++++++++.+++.+.+.... +++.+..++...|....
T Consensus 196 ~------dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~S------aW~Ylr~Ll~~~~~~~~~~~ 263 (349)
T 3q7a_A 196 V------DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVS------AWNYLRGFLKHFSLPLVPIL 263 (349)
T ss_dssp H------CTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHTTCCSGGGH
T ss_pred h------CCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHhcCCCccccc
Confidence 6 45556799999999999887 78999999999988765544 77777778777765400
Q ss_pred -------------H-HHHHHHHHHHHHHc---CCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 259 -------------A-SEHYKRTLVLAQDL---GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 307 (609)
Q Consensus 259 -------------A-~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 307 (609)
. ......++++.... +.......++..++.+|...|+.++|++.++...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~ 329 (349)
T 3q7a_A 264 PAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEKLS 329 (349)
T ss_dssp HHHGGGTC--------------CCCCC-CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccccccccccccccchhHHHHHHHHHhcccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 0 01111111111111 0112345678888999999999988888887753
No 164
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.09 E-value=2.2e-09 Score=90.43 Aligned_cols=116 Identities=31% Similarity=0.523 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
..+...|..+...|++++|+.+|++++...|.+. .++..+|.++...|++++|+.++++++.. .+....+
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~ 79 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA----EAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEA 79 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcH----HHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCccHHH
Confidence 3455678999999999999999999999998774 47899999999999999999999999987 5556788
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcc
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKG 154 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g 154 (609)
+..+|.++...|++++|+.++++++.+.+ ....++..+|.++...|
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 80 WYNLGNAYYKQGDYDEAIEYYQKALELDP------NNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998765 34557788888877654
No 165
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.09 E-value=3.7e-10 Score=102.80 Aligned_cols=128 Identities=14% Similarity=0.189 Sum_probs=106.9
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q psy10738 70 YFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNV 149 (609)
Q Consensus 70 ~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~ 149 (609)
+...|++++|+..+++++.. .+....++..+|.+|...|++++|+.+|++++.+.+ ....++..+|.+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~ 87 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRG------ENAELYAALATV 87 (177)
T ss_dssp CC-----CCCCHHHHHHHHH------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC------SCHHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC------CCHHHHHHHHHH
Confidence 34678999999999999988 677788999999999999999999999999999876 336688999999
Q ss_pred -HHHcccccccCCCCCCCCCchHhHHhH--HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy10738 150 -YHAKGKAIGKVGQQDPGEYPEEVKVCL--QEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQER 226 (609)
Q Consensus 150 -~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 226 (609)
+...|+ + ++|+.++++++.+ .+....++.++|.+|...|++++|+.+++++
T Consensus 88 l~~~~~~--------------------~~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 141 (177)
T 2e2e_A 88 LYYQASQ--------------------HMTAQTRAMIDKALAL------DSNEITALMLLASDAFMQANYAQAIELWQKV 141 (177)
T ss_dssp HHHHTTT--------------------CCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHhcCC--------------------cchHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 888998 8 9999999999987 3334568899999999999999999999999
Q ss_pred HHHHHHhCC
Q psy10738 227 LKIAREFGD 235 (609)
Q Consensus 227 l~~~~~~~~ 235 (609)
+.+.+....
T Consensus 142 l~~~p~~~~ 150 (177)
T 2e2e_A 142 MDLNSPRIN 150 (177)
T ss_dssp HHTCCTTSC
T ss_pred HhhCCCCcc
Confidence 988766544
No 166
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.05 E-value=4.8e-09 Score=104.69 Aligned_cols=226 Identities=5% Similarity=-0.109 Sum_probs=173.2
Q ss_pred HHhCCHH-HHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 71 FYLGDYQ-KAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGK----------YDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 71 ~~~g~~~-~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~----------~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
...|++. +|+.++.+++.+ .|....+++..+.++...|. +++++.++..++...+ ..
T Consensus 40 ~~~~e~s~eaL~~t~~~L~~------nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~P------Kn 107 (331)
T 3dss_A 40 RQAGELDESVLELTSQILGA------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP------KS 107 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHTT------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT------TC
T ss_pred HHcCCCCHHHHHHHHHHHHH------CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCC------CC
Confidence 3456665 799999999998 88889999999999988776 6788888888887766 55
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC-HHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN-FKQ 218 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~-~~~ 218 (609)
..+++..+.++...|.. .+++++.++.++++. .+....++.+.+.+....|. +++
T Consensus 108 y~aW~hR~wlL~~l~~~------------------~~~~EL~~~~k~l~~------dprNy~AW~~R~~vl~~l~~~~~e 163 (331)
T 3dss_A 108 YGTWHHRCWLLSRLPEP------------------NWARELELCARFLEA------DERNFHCWDYRRFVAAQAAVAPAE 163 (331)
T ss_dssp HHHHHHHHHHHHHCSSC------------------CHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHhccCcc------------------cHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhCcCHHH
Confidence 67899999999998830 189999999999987 45556789999999999998 699
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh--------------CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFL--------------GEYQAASEHYKRTLVLAQDLGDRAVEAQACY 284 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 284 (609)
+++++.++++..+.+.. ++.+.+.++... +.++++++++.+++.+.+.. ..+++
T Consensus 164 el~~~~~~I~~~p~N~S------AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d------~SaW~ 231 (331)
T 3dss_A 164 ELAFTDSLITRNFSNYS------SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPND------QSAWF 231 (331)
T ss_dssp HHHHHHHHHHHCSCCHH------HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTC------HHHHH
T ss_pred HHHHHHHHHHHCCCCHH------HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCC------HHHHH
Confidence 99999999987554433 888888888777 56889999999999988764 45665
Q ss_pred HHHHHHHHh-----------CCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH---HHcCChHHHHHHHHHHHHHH
Q psy10738 285 SLGNTYTLL-----------RDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAH---AARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 285 ~la~~~~~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~---~~~g~~~~A~~~~~~al~l~ 350 (609)
.+..++... +.++++++++.+.+++.++. ..++..++.+. ...|..++...++.+.+++-
T Consensus 232 Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~------~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~D 305 (331)
T 3dss_A 232 YHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPEN------KWCLLTIILLMRALDPLLYEKETLQYFSTLKAVD 305 (331)
T ss_dssp HHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCccc------chHHHHHHHHHHhhcccccHHHHHHHHHHHHHhC
Confidence 454444443 35788899999888887653 12233333322 23577888888888888765
No 167
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.04 E-value=6.9e-10 Score=111.28 Aligned_cols=240 Identities=8% Similarity=-0.072 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCCcH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMG-KYDEAMVCCKRHLEISRQLNDKL 137 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g-~~~~A~~~~~~al~l~~~~~d~~ 137 (609)
...++..+..+....+..++|+.++.+++.+ .|....+++..+.++...| .+++++.++.+++...+
T Consensus 53 y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nP------ 120 (349)
T 3q7a_A 53 YKDAMDYFRAIAAKEEKSERALELTEIIVRM------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNL------ 120 (349)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTC------
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCC------
Confidence 4456666666666667778999999999999 8889999999999999999 59999999999998766
Q ss_pred HHHHHHHHHHHHHHHc-c-cccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC
Q psy10738 138 SEGRALYNLGNVYHAK-G-KAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN 215 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 215 (609)
....+++..+.++... + + +++++.++.++++. .+....++...+.+....|.
T Consensus 121 Kny~aW~hR~wlL~~l~~~~--------------------~~~EL~~~~k~L~~------dpkNy~AW~~R~wvl~~l~~ 174 (349)
T 3q7a_A 121 KSYQVWHHRLLLLDRISPQD--------------------PVSEIEYIHGSLLP------DPKNYHTWAYLHWLYSHFST 174 (349)
T ss_dssp CCHHHHHHHHHHHHHHCCSC--------------------CHHHHHHHHHHTSS------CTTCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCCC--------------------hHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcc
Confidence 5567899999999888 7 6 88999999988865 45556788999999988888
Q ss_pred HH--------HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC-------HHHHHHHHHHHHHHHHHcCCcHHHH
Q psy10738 216 FK--------QAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGE-------YQAASEHYKRTLVLAQDLGDRAVEA 280 (609)
Q Consensus 216 ~~--------~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~-------~~~A~~~~~~al~~~~~~~~~~~~~ 280 (609)
++ ++++++.++++..+.+.. ++.+.+.++...+. ++++++++.+++.+.+.. .
T Consensus 175 ~~~~~~~~~~eELe~~~k~I~~dp~N~S------AW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n------~ 242 (349)
T 3q7a_A 175 LGRISEAQWGSELDWCNEMLRVDGRNNS------AWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHN------V 242 (349)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTC------H
T ss_pred ccccchhhHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCC------H
Confidence 87 999999999887554433 88999999988887 789999999999887764 5
Q ss_pred HHHHHHHHHHHHhCCHHH----------------H-HHHHHHHHHHHHHh---cchhhHHHHHHHHHHHHHHcCChHHHH
Q psy10738 281 QACYSLGNTYTLLRDYPT----------------A-IDYHLRHLIIAQQL---MDRVGEGRACWSLGNAHAARGNHEKAL 340 (609)
Q Consensus 281 ~~~~~la~~~~~~g~~~~----------------A-~~~~~~al~~~~~~---~~~~~~~~~~~~La~~~~~~g~~~~A~ 340 (609)
.+++.+..++...|.... . ......++.+.... +.......++..|+.+|...|+.++|.
T Consensus 243 SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~ 322 (349)
T 3q7a_A 243 SAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQNRVDDAA 322 (349)
T ss_dssp HHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcHHHHHHHHHHHHhcCCHHHHH
Confidence 677777778877776410 0 01111111111111 011345568889999999999999999
Q ss_pred HHHHHHHH
Q psy10738 341 YFATKHLE 348 (609)
Q Consensus 341 ~~~~~al~ 348 (609)
..++...+
T Consensus 323 ~~~~~l~~ 330 (349)
T 3q7a_A 323 KVFEKLSS 330 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887543
No 168
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.04 E-value=3.5e-09 Score=88.20 Aligned_cols=110 Identities=23% Similarity=0.320 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|..+...|++++|+.+|++++...|.+. .++..+|.++...|++++|+.++++++.. .+....++
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~ 75 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHNH----VLYSNRSAAYAKKGDYQKAYEDGCKTVDL------KPDWGKGY 75 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH----HHHHHHHHHHHhhccHHHHHHHHHHHHHh------CcccHHHH
Confidence 455679999999999999999999999999874 48899999999999999999999999998 66678899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNV 149 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~ 149 (609)
..+|.++...|++++|+.++++++++.+ ....++..++.+
T Consensus 76 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~ 115 (118)
T 1elw_A 76 SRKAAALEFLNRFEEAKRTYEEGLKHEA------NNPQLKEGLQNM 115 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCT------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHcCC------CCHHHHHHHHHh
Confidence 9999999999999999999999988755 233455555554
No 169
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.03 E-value=3.4e-09 Score=89.27 Aligned_cols=116 Identities=38% Similarity=0.616 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
..++..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++...+ ..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~------~~ 76 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------NN 76 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC------cc
Confidence 446666777777777777777777777665 344456666777777777777777777777666533 22
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHc
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLL 213 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~ 213 (609)
..++..+|.++...|+ +++|+.++++++.+. +....++..+|.++...
T Consensus 77 ~~~~~~la~~~~~~~~--------------------~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 77 AEAWYNLGNAYYKQGD--------------------YDEAIEYYQKALELD------PNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC--------------------HHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHhc
Confidence 3456667777777776 777777776666552 22234555566555543
No 170
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.03 E-value=1.6e-09 Score=111.25 Aligned_cols=130 Identities=16% Similarity=0.192 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC----------ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 200 GRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFG----------DKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 269 (609)
Q Consensus 200 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 269 (609)
+..+..+|..++..|+|++|+.+|++++++.+... .......++.++|.+|..+|++++|+.++++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45788999999999999999999999999776532 34455679999999999999999999999999987
Q ss_pred HHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHH
Q psy10738 270 AQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALY 341 (609)
Q Consensus 270 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~ 341 (609)
.+. ...+++.+|.+|..+|++++|+.+|++++++.+. ...++..++.++..+++++++..
T Consensus 303 ~p~------~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~------~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 303 DPS------NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE------DKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp CTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cch------hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHHHHHHHH
Confidence 654 3778999999999999999999999999988654 24578888999988888877754
No 171
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.03 E-value=2.1e-09 Score=92.92 Aligned_cols=101 Identities=23% Similarity=0.233 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
+..+..+|.+++..|++++|+.++++++.. .+....++.++|.++...|++++|+.++++++.+.+ ..
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p------~~ 76 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR------NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDG------QS 76 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc------hh
Confidence 446777777777777777777777777776 555667777777777777777777777777777654 34
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKE 192 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 192 (609)
..+++.+|.+|...|+ +++|+.++++++.+.+.
T Consensus 77 ~~~~~~l~~~~~~~~~--------------------~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 77 VKAHFFLGQCQLEMES--------------------YDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHHChh
Confidence 5567777777777777 77777777777776554
No 172
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.02 E-value=3.7e-09 Score=89.93 Aligned_cols=122 Identities=18% Similarity=0.170 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc-CCcH
Q psy10738 199 QGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL-GDRA 277 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~ 277 (609)
.+.++..+|.++...|++++|+.++++++...+.. ..++.++|.++...|++++|+.++++++...+.. .+..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN------MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc------HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHH
Confidence 35678999999999999999999999999875432 3488999999999999999999999999999875 3444
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHc
Q psy10738 278 VEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAAR 333 (609)
Q Consensus 278 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~ 333 (609)
....+++.+|.++...|++++|+.++++++.+.+. ......++.+....
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-------~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-------PDVLKKCQQAEKIL 125 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHH
Confidence 44788999999999999999999999999986432 23455555555443
No 173
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.01 E-value=1e-09 Score=119.07 Aligned_cols=181 Identities=9% Similarity=-0.036 Sum_probs=156.7
Q ss_pred HHHHhcCCh-HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHcCChhh
Q psy10738 30 ERLCKAGDC-RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGD----------YQKAMQYHKQDLTLARNMEDKLG 98 (609)
Q Consensus 30 ~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~~~d~~~ 98 (609)
......|++ ++|+..+.+++..+|++.. +|+..+.++...|+ +++++.++.+++.. .+.
T Consensus 36 ~~~~~~~~~~eeal~~~~~~l~~nP~~~t----aW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~------~pK 105 (567)
T 1dce_A 36 FQKRQAGELDESVLELTSQILGANPDFAT----LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV------NPK 105 (567)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH------CTT
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHCchhHH----HHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh------CCC
Confidence 344556665 5779999999999999854 89999999999998 99999999999998 888
Q ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcc-cccccCCCCCCCCCchHhHHh
Q psy10738 99 EAKSSGNLGNTLKVMG--KYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKG-KAIGKVGQQDPGEYPEEVKVC 175 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g--~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 175 (609)
...+|+..+.++...| ++++|+.++.+++++.+ ....+|...+.+....| .
T Consensus 106 ~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~------~N~~aW~~R~~~l~~l~~~-------------------- 159 (567)
T 1dce_A 106 SYGTWHHRCWLLSRLPEPNWARELELCARFLEADE------RNFHCWDYRRFVAAQAAVA-------------------- 159 (567)
T ss_dssp CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTCCC--------------------
T ss_pred CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcc------ccccHHHHHHHHHHHcCCC--------------------
Confidence 9999999999999999 77999999999999876 55779999999999999 7
Q ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHHHHHhCChHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLL--------------GNFKQAIYYHQERLKIAREFGDKAAERR 241 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~ 241 (609)
++++++++.++++. .+....+|++.|.++..+ +.+++|++++.+++.+.+....
T Consensus 160 ~~~el~~~~~~I~~------~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~s------ 227 (567)
T 1dce_A 160 PAEELAFTDSLITR------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQS------ 227 (567)
T ss_dssp HHHHHHHHHTTTTT------TCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSH------
T ss_pred hHHHHHHHHHHHHH------CCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCcc------
Confidence 99999999998876 455567899999998885 5689999999999998877665
Q ss_pred HHHHHHHHHHHhCCHHH
Q psy10738 242 ANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 242 ~~~~la~~~~~~g~~~~ 258 (609)
+|+.++.++...+.+++
T Consensus 228 aW~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 228 AWFYHRWLLGRAEPHDV 244 (567)
T ss_dssp HHHHHHHHHSCCCCCSC
T ss_pred HHHHHHHHHhcCCCccc
Confidence 88899999988888655
No 174
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.01 E-value=7.4e-09 Score=88.34 Aligned_cols=103 Identities=15% Similarity=0.055 Sum_probs=89.0
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 25 LALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
++..|..++..|++++|+..|+++++..|+++. ...+++.+|.++...|++++|+.++++++...+ +.+....+++
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p---~~~~~~~~~~ 80 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVY-TPNALYWLGESYYATRNFQLAEAQFRDLVSRYP---THDKAAGGLL 80 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---TSTTHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC---CCcccHHHHH
Confidence 345689999999999999999999999997753 345889999999999999999999999998721 1222378999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
.+|.++...|++++|+.++++++...+
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 999999999999999999999998765
No 175
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.01 E-value=7.6e-09 Score=87.94 Aligned_cols=104 Identities=22% Similarity=0.360 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CCcHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL-NDKLS 138 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~-~d~~~ 138 (609)
+.++..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+.. .+...
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 77 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKEL------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQ 77 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHH
Confidence 568899999999999999999999999998 56678899999999999999999999999999998865 33334
Q ss_pred HHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHH
Q psy10738 139 EGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 139 ~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 189 (609)
...+++.+|.+|...|+ +++|+.++++++.+
T Consensus 78 ~~~~~~~la~~~~~~~~--------------------~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 78 IAKAYARIGNSYFKEEK--------------------YKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc--------------------HHHHHHHHHHHHHh
Confidence 47899999999999999 99999999999886
No 176
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.00 E-value=5e-11 Score=127.01 Aligned_cols=128 Identities=14% Similarity=0.095 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHH
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQE 178 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (609)
.+.++..+|.++...|++++|+.+|++++++.+ ..+.++.++|.+|...|+ +++
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p------~~~~~~~~lg~~~~~~g~--------------------~~~ 58 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNP------SNAIYYGNRSLAYLRTEC--------------------YGY 58 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC--------------------HHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC------ccHHHHHHHHHHHHHhcC--------------------HHH
Confidence 445566667777777777777777777777644 335677777777777777 777
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH--HHHhCCH
Q psy10738 179 AIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNS--HIFLGEY 256 (609)
Q Consensus 179 A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~--~~~~g~~ 256 (609)
|+.++++++++ .+....++.++|.+|..+|++++|+.++++++++.+.... ++.+++.+ +...|++
T Consensus 59 A~~~~~~al~l------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~------~~~~l~~~~~~~~~g~~ 126 (477)
T 1wao_1 59 ALGDATRAIEL------DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKD------AKMKYQECNKIVKQKAF 126 (477)
T ss_dssp HHHHHHHHHHS------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTT------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHHHHHH
Confidence 77777777766 3334567777777777777777777777777777655444 55566666 6677777
Q ss_pred HHHHHHHH
Q psy10738 257 QAASEHYK 264 (609)
Q Consensus 257 ~~A~~~~~ 264 (609)
++|+..++
T Consensus 127 ~~A~~~~~ 134 (477)
T 1wao_1 127 ERAIAGDE 134 (477)
T ss_dssp CCC-----
T ss_pred HHHhcccc
Confidence 77777777
No 177
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.99 E-value=2.7e-09 Score=109.60 Aligned_cols=91 Identities=20% Similarity=0.277 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC----------ChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNME----------DKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLE 128 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~----------d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 128 (609)
.+..+..+|..++..|++++|+.+|++++.+..... ..+....++.++|.+|..+|++++|+.+++++++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 345677888888888888888888888888644321 2344455555555555555555555555555555
Q ss_pred HHHHcCCcHHHHHHHHHHHHHHHHccc
Q psy10738 129 ISRQLNDKLSEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 129 l~~~~~d~~~~~~~~~~lg~~~~~~g~ 155 (609)
+.+ ....+++.+|.+|...|+
T Consensus 302 ~~p------~~~~a~~~lg~~~~~~g~ 322 (370)
T 1ihg_A 302 IDP------SNTKALYRRAQGWQGLKE 322 (370)
T ss_dssp TCT------TCHHHHHHHHHHHHHTTC
T ss_pred hCc------hhHHHHHHHHHHHHHccC
Confidence 433 234455555555555555
No 178
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.96 E-value=3e-09 Score=90.38 Aligned_cols=98 Identities=11% Similarity=-0.029 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
.++.+|..+...|++++|+..+++++.. .|..+.+++.+|.++...|++++|+.+|++++++.+ ....
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P------~~~~ 86 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP------KDIA 86 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHH
Confidence 4678999999999999999999999999 888899999999999999999999999999999877 4566
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMK 191 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 191 (609)
++..+|.+|...|+ +++|+..+++++++.+
T Consensus 87 ~~~~la~~~~~~g~--------------------~~~A~~~~~~al~~~P 116 (121)
T 1hxi_A 87 VHAALAVSHTNEHN--------------------ANAALASLRAWLLSQP 116 (121)
T ss_dssp HHHHHHHHHHHHHH--------------------HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHhCc
Confidence 89999999999999 9999999999987643
No 179
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=7.1e-09 Score=90.53 Aligned_cols=103 Identities=20% Similarity=0.288 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
...+...|..++..|++++|+.+|+++++..|++.. ...++..+|.+|...|++++|+.++++++.. .+....
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~ 100 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQD-QAVLHRNRAACHLKLEDYDKAETEASKAIEK------DGGDVK 100 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------TSCCHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHhh------CccCHH
Confidence 445667799999999999999999999999886522 4568999999999999999999999999998 566688
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
+++.+|.++...|++++|+.++++++.+.+
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 130 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVSLEP 130 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999998765
No 180
>4g5o_E G-protein-signaling modulator 2; galphai, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 2.90A {Mus musculus} PDB: 4g5q_E* 4g5r_E*
Probab=98.95 E-value=2.8e-10 Score=60.61 Aligned_cols=23 Identities=35% Similarity=0.788 Sum_probs=20.4
Q ss_pred CchHHHHHHHhhhcchhhhcccC
Q psy10738 536 DDGFLDMLIRCQGARLEDQRSHL 558 (609)
Q Consensus 536 ~~~~~~~~~~~q~~r~~~qr~~~ 558 (609)
|+|||++|+|.|+.||||||.-+
T Consensus 1 dedffslilrsqakrmdeqrvll 23 (26)
T 4g5o_E 1 DEDFFSLILRSQAKRMDEQRVLL 23 (26)
T ss_dssp -CCHHHHHHHHHHCSCGGGCBCC
T ss_pred CchHHHHHHHHHHHhhhHHHhhh
Confidence 68999999999999999999765
No 181
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.94 E-value=8.2e-09 Score=85.92 Aligned_cols=112 Identities=17% Similarity=0.195 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
+..++.+|..+...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+ ..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~ 71 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKL------DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP------DW 71 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT------TC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc------cc
Confidence 457899999999999999999999999998 666788999999999999999999999999998865 34
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNT 209 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 209 (609)
..++..+|.++...|+ +++|+.++++++.+. +....++..++.+
T Consensus 72 ~~~~~~~a~~~~~~~~--------------------~~~A~~~~~~~~~~~------~~~~~~~~~l~~~ 115 (118)
T 1elw_A 72 GKGYSRKAAALEFLNR--------------------FEEAKRTYEEGLKHE------ANNPQLKEGLQNM 115 (118)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHTTC------TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHcC------CCCHHHHHHHHHh
Confidence 6789999999999999 999999999998762 2233455555554
No 182
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.91 E-value=1e-09 Score=111.46 Aligned_cols=142 Identities=18% Similarity=0.063 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-----------cHHHHHHHHHHHHHHHHcccccccCCCCCCCC
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLND-----------KLSEGRALYNLGNVYHAKGKAIGKVGQQDPGE 167 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d-----------~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~ 167 (609)
.+..+..+|..+...|+|++|+.+|.+++.+.+.... ......+++++|.+|...|+
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~------------ 245 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKR------------ 245 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTC------------
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCC------------
Confidence 4455566666666666666666666666655431100 00011367777777777777
Q ss_pred CchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Q psy10738 168 YPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLG 247 (609)
Q Consensus 168 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 247 (609)
|++|+.++++++.+ .+....+++++|.+|..+|++++|+.+|++++++.+.... ++..++
T Consensus 246 --------~~~A~~~~~~al~~------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~------a~~~L~ 305 (338)
T 2if4_A 246 --------YDEAIGHCNIVLTE------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKA------IRRELR 305 (338)
T ss_dssp --------CHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred --------HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH------HHHHHH
Confidence 77777777777766 2334567777777777777777777777777777665443 556666
Q ss_pred HH-HHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 248 NS-HIFLGEYQAASEHYKRTLVLAQD 272 (609)
Q Consensus 248 ~~-~~~~g~~~~A~~~~~~al~~~~~ 272 (609)
.+ ....+..+++...|.+++...+.
T Consensus 306 ~l~~~~~~~~~~a~~~~~~~l~~~p~ 331 (338)
T 2if4_A 306 ALAEQEKALYQKQKEMYKGIFKGKDE 331 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 66 33445566666777776665544
No 183
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.91 E-value=1.8e-09 Score=109.63 Aligned_cols=138 Identities=15% Similarity=0.128 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchh-------------HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLR-------------TLSAIYSQLGNAYFYLGDYQKAMQYHKQDLT 88 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-------------~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~ 88 (609)
...+...|..++..|+|++|+..|++++...|.+.. ....+++++|.+|..+|+|++|+.++++++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344566799999999999999999999999887541 0113889999999999999999999999999
Q ss_pred HHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-cccccccCCCCCCCC
Q psy10738 89 LARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA-KGKAIGKVGQQDPGE 167 (609)
Q Consensus 89 ~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~-~g~~~~~~~~~~~~~ 167 (609)
+ .+....+++++|.+|..+|++++|+.+|++++.+.+ ....++..++.+... .+.
T Consensus 259 ~------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p------~~~~a~~~L~~l~~~~~~~------------ 314 (338)
T 2if4_A 259 E------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAP------DDKAIRRELRALAEQEKAL------------ 314 (338)
T ss_dssp H------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------------------------------
T ss_pred h------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHH------------
Confidence 8 777889999999999999999999999999999877 445677788877444 344
Q ss_pred CchHhHHhHHHHHHHHHHHHHHHH
Q psy10738 168 YPEEVKVCLQEAIKYYEQNLALMK 191 (609)
Q Consensus 168 ~~~~~~~~~~~A~~~~~~al~~~~ 191 (609)
.+++...|.+++...+
T Consensus 315 --------~~~a~~~~~~~l~~~p 330 (338)
T 2if4_A 315 --------YQKQKEMYKGIFKGKD 330 (338)
T ss_dssp ------------------------
T ss_pred --------HHHHHHHHHHhhCCCC
Confidence 7778888888776643
No 184
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.91 E-value=1.2e-08 Score=100.16 Aligned_cols=258 Identities=9% Similarity=-0.067 Sum_probs=170.6
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q psy10738 29 GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGN 108 (609)
Q Consensus 29 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~ 108 (609)
....+..|+|..++.- +-+..+.+.. .....+.++|..+|++.... .+.+ ...+...++.
T Consensus 20 ikn~fy~G~yq~~i~e---~~~~~~~~~~---~~~~~~~Rs~iAlg~~~~~~-------------~~~~-~~~a~~~la~ 79 (310)
T 3mv2_B 20 IKQNYYTGNFVQCLQE---IEKFSKVTDN---TLLFYKAKTLLALGQYQSQD-------------PTSK-LGKVLDLYVQ 79 (310)
T ss_dssp HHHHHTTTCHHHHTHH---HHTSSCCCCH---HHHHHHHHHHHHTTCCCCCC-------------SSST-THHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHH---HHhcCccchH---HHHHHHHHHHHHcCCCccCC-------------CCCH-HHHHHHHHHH
Confidence 5667889999999983 4445555443 25566778888899887421 1222 2233444444
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHH
Q psy10738 109 TLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLA 188 (609)
Q Consensus 109 ~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 188 (609)
.+. +. |+..+++.+... .. ...++..+|.++...|+ +++|+..+.+.+.
T Consensus 80 ~~~--~~---a~~~l~~l~~~~----~~--~~~~~~~la~i~~~~g~--------------------~eeAL~~l~~~i~ 128 (310)
T 3mv2_B 80 FLD--TK---NIEELENLLKDK----QN--SPYELYLLATAQAILGD--------------------LDKSLETCVEGID 128 (310)
T ss_dssp HHT--TT---CCHHHHHTTTTS----CC--CHHHHHHHHHHHHHHTC--------------------HHHHHHHHHHHHT
T ss_pred Hhc--cc---HHHHHHHHHhcC----CC--CcHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHhc
Confidence 432 22 666666654321 11 13345799999999999 9999999998754
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHH
Q psy10738 189 LMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLG--EYQAASEHYKRT 266 (609)
Q Consensus 189 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~a 266 (609)
.. .......++..++.++..+|+.+.|.+.+++..+..+..............-|++.+..| ++.+|..+|+++
T Consensus 129 ~~----~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El 204 (310)
T 3mv2_B 129 ND----EAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEEL 204 (310)
T ss_dssp SS----CSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHH
T ss_pred cC----CCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 31 112456788899999999999999999999876653310000111123333344566667 999999999996
Q ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcc----hhhHHHHHHHHHHHHHHcCChHHHHHH
Q psy10738 267 LVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMD----RVGEGRACWSLGNAHAARGNHEKALYF 342 (609)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~La~~~~~~g~~~~A~~~ 342 (609)
....+ + +.....+++ ++..+|++++|...++..++..++.+. ....+.++.+++.+...+|+ +|.++
T Consensus 205 ~~~~p---~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l 275 (310)
T 3mv2_B 205 SQTFP---T-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDL 275 (310)
T ss_dssp HTTSC---S-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHH
T ss_pred HHhCC---C-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHH
Confidence 54332 1 112223333 899999999999999988877665322 24467788899989999998 88888
Q ss_pred HHHHHHHH
Q psy10738 343 ATKHLEIS 350 (609)
Q Consensus 343 ~~~al~l~ 350 (609)
+.++.+..
T Consensus 276 ~~qL~~~~ 283 (310)
T 3mv2_B 276 TNQLVKLD 283 (310)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 88877654
No 185
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.90 E-value=1e-09 Score=116.76 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=102.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHH
Q psy10738 28 EGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLG 107 (609)
Q Consensus 28 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg 107 (609)
.|..++..|++++|+.+|+++++..|.+ +.++..+|.+|..+|++++|+.++++++++ .+..+.+++++|
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~lg 81 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIELNPSN----AIYYGNRSLAYLRTECYGYALGDATRAIEL------DKKYIKGYYRRA 81 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------CTTCHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCcc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Confidence 4667788999999999999999999987 458999999999999999999999999998 777889999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH--HHHcccccccCCCCCCCCCchHhHHhHHHHHHHHH
Q psy10738 108 NTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNV--YHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYE 184 (609)
Q Consensus 108 ~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 184 (609)
.+|..+|++++|+.+|++++++.+.. ..++.+++.+ +...|+ +++|+..++
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~g~--------------------~~~A~~~~~ 134 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKPHD------KDAKMKYQECNKIVKQKA--------------------FERAIAGDE 134 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTC------TTHHHHHHHHHHHHHHHH--------------------HCCC-----
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHH--------------------HHHHhcccc
Confidence 99999999999999999999986632 3366677777 888898 888888888
No 186
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.90 E-value=5.3e-09 Score=88.04 Aligned_cols=91 Identities=19% Similarity=0.267 Sum_probs=77.6
Q ss_pred hcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHc
Q psy10738 34 KAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVM 113 (609)
Q Consensus 34 ~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~ 113 (609)
..|++++|+.+|+++++.+++++. ...++..+|.+|...|++++|+.++++++++ .|....+++++|.++...
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~ 74 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQ------FPNHQALRVFYAMVLYNL 74 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCchHHHHHHHHHHHHc
Confidence 468999999999999998543332 3568999999999999999999999999999 777789999999999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy10738 114 GKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 114 g~~~~A~~~~~~al~l~~ 131 (609)
|++++|+.++++++...+
T Consensus 75 g~~~~A~~~~~~al~~~p 92 (117)
T 3k9i_A 75 GRYEQGVELLLKIIAETS 92 (117)
T ss_dssp TCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCC
Confidence 999999999999998865
No 187
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.88 E-value=4.7e-08 Score=101.83 Aligned_cols=117 Identities=9% Similarity=0.039 Sum_probs=102.6
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHc--CChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHH
Q psy10738 71 FYLGDYQKAMQYHKQDLTLARNM--EDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYNL 146 (609)
Q Consensus 71 ~~~g~~~~A~~~~~~al~~~~~~--~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~l 146 (609)
...|+|++|+..+++++++..+. .+++..+.++.++|.+|..+|+|++|+.++++++++.... .+.+..+..+++|
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 35689999999999999998765 4678899999999999999999999999999999999876 4577899999999
Q ss_pred HHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHH
Q psy10738 147 GNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI--NDTAAQGRACGNLG 207 (609)
Q Consensus 147 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg 207 (609)
|.+|..+|+ |++|+.+|++|+++.... .+++....+..+|.
T Consensus 389 a~~~~~qg~--------------------~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 389 GRLYMGLEN--------------------KAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHHHTTC--------------------HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHHhccC--------------------HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 999999999 999999999999999876 45666666665553
No 188
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.87 E-value=3.5e-09 Score=92.90 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=80.0
Q ss_pred hcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCH----------HHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 34 KAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDY----------QKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 34 ~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~----------~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
+.+.|++|+..++++++++|++.. +|.++|.++..++++ ++|+..|++++++ .|....++
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~ae----a~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l------dP~~~~A~ 83 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDAD----NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI------DPKKDEAV 83 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh------CcCcHHHH
Confidence 456789999999999999999854 889999999998875 5999999999999 88999999
Q ss_pred HHHHHHHHHcC-----------CHHHHHHHHHHHHHHHH
Q psy10738 104 GNLGNTLKVMG-----------KYDEAMVCCKRHLEISR 131 (609)
Q Consensus 104 ~~lg~~~~~~g-----------~~~~A~~~~~~al~l~~ 131 (609)
+++|.+|..+| ++++|+.+|++|+++.+
T Consensus 84 ~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P 122 (158)
T 1zu2_A 84 WCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQP 122 (158)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCC
Confidence 99999999885 89999999999999977
No 189
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.87 E-value=6.8e-08 Score=100.77 Aligned_cols=130 Identities=15% Similarity=0.070 Sum_probs=111.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHh-----CCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCh
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQA-----GTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNM--EDK 96 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~d~ 96 (609)
.+......+..+|+|++|+..++++++. +++++ ..+.++.++|.+|..+|+|++|+.++++++.+.++. .+.
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~-~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H 367 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINI-YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH 367 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSH-HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccch-HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC
Confidence 3444466778899999999999999975 34444 477899999999999999999999999999998875 578
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcc
Q psy10738 97 LGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYNLGNVYHAKG 154 (609)
Q Consensus 97 ~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~lg~~~~~~g 154 (609)
+..+..+++||.+|..+|++++|+.++++|+++.... .+++....++.+|+.+...++
T Consensus 368 p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 368 PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999876 356678888888888876543
No 190
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.87 E-value=5.3e-08 Score=101.45 Aligned_cols=116 Identities=14% Similarity=0.078 Sum_probs=99.9
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHH
Q psy10738 111 KVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLA 188 (609)
Q Consensus 111 ~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 188 (609)
...|+|++|+..+++++++.... .+.+..+.++.+||.+|..+|+ |++|+.++++++.
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~--------------------~~eA~~~~~~aL~ 368 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQD--------------------WEGALKYGQKIIK 368 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcC--------------------HHHHHHHHHHHHH
Confidence 35689999999999999998765 3566889999999999999999 9999999999999
Q ss_pred HHHHh--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHH
Q psy10738 189 LMKEI--NDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREF--GDKAAERRANSNL 246 (609)
Q Consensus 189 ~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l 246 (609)
+.++. .+++..+..+++||.+|..+|++++|+.+|++|+++.... .+.+....+..+|
T Consensus 369 i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 369 PYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 99887 5789999999999999999999999999999999998874 3334444444443
No 191
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.85 E-value=1.8e-08 Score=85.95 Aligned_cols=102 Identities=17% Similarity=0.073 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
.++.+|.+++..|++++|+..+++++... .+.+....+++.+|.++...|++++|+.+|++++...+.. .....
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~---p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~---~~~~~ 77 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELY---PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH---DKAAG 77 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHC---SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS---TTHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHC---CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC---cccHH
Confidence 45677888888888888888888777652 1223334677788888888888888888888877765422 22356
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 189 (609)
+++.+|.+|...|+ +++|+.++++++..
T Consensus 78 ~~~~la~~~~~~g~--------------------~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 78 GLLKLGLSQYGEGK--------------------NTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHH
Confidence 77778888888887 88888888777765
No 192
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.84 E-value=5e-08 Score=101.80 Aligned_cols=129 Identities=15% Similarity=0.146 Sum_probs=110.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQL--NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKY 182 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~~--~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 182 (609)
....-+..+|+|++|+..+++++++.... .+.+..+.++.++|.+|..+|+ |++|+.+
T Consensus 292 ~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~--------------------~~eA~~~ 351 (429)
T 3qwp_A 292 KKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGL--------------------LEEALFY 351 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTC--------------------HHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhcc--------------------HHHHHHH
Confidence 33445667899999999999999876554 3556889999999999999999 9999999
Q ss_pred HHHHHHHHHHh--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHHh
Q psy10738 183 YEQNLALMKEI--NDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREF--GDKAAERRANSNLGNSHIFL 253 (609)
Q Consensus 183 ~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~ 253 (609)
+++++.+.+.. .+++..+..+++||.+|..+|++++|+.++++|+++.... .+.+....++.+|+.+...+
T Consensus 352 ~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 352 GTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 99999999887 6789999999999999999999999999999999999884 45566777778888776543
No 193
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.84 E-value=3.1e-08 Score=82.89 Aligned_cols=89 Identities=20% Similarity=0.229 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHH
Q psy10738 39 RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDE 118 (609)
Q Consensus 39 ~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~ 118 (609)
++|+..|+++++..|++. .+++.+|.+|...|++++|+.++++++.+ .+....+++.+|.+|...|++++
T Consensus 2 ~~a~~~~~~al~~~p~~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~ 71 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNM----LLRFTLGKTYAEHEQFDAALPHLRAALDF------DPTYSVAWKWLGKTLQGQGDRAG 71 (115)
T ss_dssp CCHHHHHHHHHTTTCCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHH
T ss_pred hHHHHHHHHHHHhCCCcH----HHHHHHHHHHHHccCHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHcCCHHH
Confidence 368899999999999885 48899999999999999999999999998 67778899999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCcH
Q psy10738 119 AMVCCKRHLEISRQLNDKL 137 (609)
Q Consensus 119 A~~~~~~al~l~~~~~d~~ 137 (609)
|+.+|++++.+.+..++..
T Consensus 72 A~~~~~~al~~~~~~~~~~ 90 (115)
T 2kat_A 72 ARQAWESGLAAAQSRGDQQ 90 (115)
T ss_dssp HHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHhccccccHH
Confidence 9999999999998766543
No 194
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=1.9e-08 Score=87.80 Aligned_cols=101 Identities=23% Similarity=0.290 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
+..+..+|..++..|++++|+.++++++... .+......++..+|.+|...|++++|+.++++++.+.+ ..
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~---~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~------~~ 98 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLD---ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG------GD 98 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS------CC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc---ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc------cC
Confidence 4577888888888888888888888887761 11222377888888888888888888888888887644 23
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 189 (609)
..+++.+|.++...|+ +++|+.++++++.+
T Consensus 99 ~~~~~~~a~~~~~~~~--------------------~~~A~~~~~~al~~ 128 (148)
T 2dba_A 99 VKALYRRSQALEKLGR--------------------LDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHHHTC--------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHc
Confidence 5677888888888888 88888888888776
No 195
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.80 E-value=7e-08 Score=94.83 Aligned_cols=195 Identities=11% Similarity=-0.017 Sum_probs=135.7
Q ss_pred HHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHH
Q psy10738 41 GVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAM 120 (609)
Q Consensus 41 A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~ 120 (609)
|+..|++.+...+.+. ..+..+|.++...|++++|+.++.+++.. +.......++..++.++..+|+.+.|.
T Consensus 85 a~~~l~~l~~~~~~~~----~~~~~la~i~~~~g~~eeAL~~l~~~i~~----~~~~~~lea~~l~vqi~L~~~r~d~A~ 156 (310)
T 3mv2_B 85 NIEELENLLKDKQNSP----YELYLLATAQAILGDLDKSLETCVEGIDN----DEAEGTTELLLLAIEVALLNNNVSTAS 156 (310)
T ss_dssp CCHHHHHTTTTSCCCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHTS----SCSTTHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhcCCCCc----HHHHHHHHHHHHcCCHHHHHHHHHHHhcc----CCCcCcHHHHHHHHHHHHHCCCHHHHH
Confidence 6777777776553332 24568999999999999999999998654 111367889999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcc--cccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHH
Q psy10738 121 VCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKG--KAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAA 198 (609)
Q Consensus 121 ~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 198 (609)
+.+++..+..+..-.......+...-|++....| + +.+|..+|++.... .++ ..
T Consensus 157 k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~--------------------~q~A~~~f~El~~~---~p~-~~ 212 (310)
T 3mv2_B 157 TIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKET--------------------ATSNFYYYEELSQT---FPT-WK 212 (310)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCST--------------------TTHHHHHHHHHHTT---SCS-HH
T ss_pred HHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCcc--------------------HHHHHHHHHHHHHh---CCC-cc
Confidence 9999876653200000122223333354566666 6 89999999986443 222 11
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 199 QGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDK----AAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 272 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~----~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 272 (609)
....+.+ ++..+|++++|...++..++..+..+.. ...+.++.+++.+...+|+ +|.+++.++.+..++
T Consensus 213 ~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~ 285 (310)
T 3mv2_B 213 TQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHE 285 (310)
T ss_dssp HHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCC
T ss_pred cHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCC
Confidence 2233333 8999999999999999888877663221 1234578888888888898 888888888776654
No 196
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.79 E-value=1.6e-08 Score=83.38 Aligned_cols=96 Identities=21% Similarity=0.268 Sum_probs=86.0
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhh--HHHHH
Q psy10738 26 ALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLG--EAKSS 103 (609)
Q Consensus 26 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~--~~~a~ 103 (609)
...|..+...|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.. .+. ...++
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~ 79 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDPEES----KYWLMKGKALYNLERYEEAVDCYNYVINV------IEDEYNKDVW 79 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHT------SCCTTCHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHh------CcccchHHHH
Confidence 3458899999999999999999999999874 47899999999999999999999999987 555 68899
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHH
Q psy10738 104 GNLGNTLKVM-GKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 104 ~~lg~~~~~~-g~~~~A~~~~~~al~l~~ 131 (609)
..+|.++... |++++|+.++.+++...+
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 80 AAKADALRYIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHHHTTCSSCSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhccc
Confidence 9999999999 999999999999876543
No 197
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.79 E-value=1.2e-08 Score=110.61 Aligned_cols=177 Identities=6% Similarity=-0.103 Sum_probs=151.2
Q ss_pred HhCCH-HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHcCCcHHHH
Q psy10738 72 YLGDY-QKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGK----------YDEAMVCCKRHLEISRQLNDKLSEG 140 (609)
Q Consensus 72 ~~g~~-~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~----------~~~A~~~~~~al~l~~~~~d~~~~~ 140 (609)
..|++ ++|+..+.+++.+ .|....+|+..+.++...|+ +++|+.++.+++...+ ...
T Consensus 40 ~~~~~~eeal~~~~~~l~~------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~p------K~y 107 (567)
T 1dce_A 40 QAGELDESVLELTSQILGA------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP------KSY 107 (567)
T ss_dssp HTTCCSHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCT------TCH
T ss_pred HcCCCCHHHHHHHHHHHHH------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCC------CCH
Confidence 34444 6789999999999 88999999999999999998 9999999999998776 567
Q ss_pred HHHHHHHHHHHHcc--cccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC-CHH
Q psy10738 141 RALYNLGNVYHAKG--KAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG-NFK 217 (609)
Q Consensus 141 ~~~~~lg~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g-~~~ 217 (609)
.+|++.+.++...| + ++++++++.+++++ .+....+|.+.+.+....| .++
T Consensus 108 ~aW~hR~w~l~~l~~~~--------------------~~~el~~~~k~l~~------d~~N~~aW~~R~~~l~~l~~~~~ 161 (567)
T 1dce_A 108 GTWHHRCWLLSRLPEPN--------------------WARELELCARFLEA------DERNFHCWDYRRFVAAQAAVAPA 161 (567)
T ss_dssp HHHHHHHHHHHTCSSCC--------------------HHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHccccc--------------------HHHHHHHHHHHHhh------ccccccHHHHHHHHHHHcCCChH
Confidence 79999999999999 5 79999999999998 4555779999999999999 999
Q ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHh--------------CCHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Q psy10738 218 QAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFL--------------GEYQAASEHYKRTLVLAQDLGDRAVEAQAC 283 (609)
Q Consensus 218 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 283 (609)
++++++.++++..+... .+|.+.+.++... +.+++|++++.+|+.+.+.. ..+|
T Consensus 162 ~el~~~~~~I~~~p~n~------saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~------~saW 229 (567)
T 1dce_A 162 EELAFTDSLITRNFSNY------SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPND------QSAW 229 (567)
T ss_dssp HHHHHHHTTTTTTCCCH------HHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSC------SHHH
T ss_pred HHHHHHHHHHHHCCCCc------cHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCC------ccHH
Confidence 99999999988654433 3888889888875 56799999999999887764 5688
Q ss_pred HHHHHHHHHhCCHHH
Q psy10738 284 YSLGNTYTLLRDYPT 298 (609)
Q Consensus 284 ~~la~~~~~~g~~~~ 298 (609)
+.++.++...+.+++
T Consensus 230 ~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 230 FYHRWLLGRAEPHDV 244 (567)
T ss_dssp HHHHHHHSCCCCCSC
T ss_pred HHHHHHHhcCCCccc
Confidence 888999988888665
No 198
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.77 E-value=9.4e-09 Score=84.75 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
++..+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++++.+. .....
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~----~~~~~ 77 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQL------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED----EYNKD 77 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC----TTCHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHh------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc----cchHH
Confidence 6788999999999999999999999998 5666789999999999999999999999999987552 11467
Q ss_pred HHHHHHHHHHHc-ccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHH
Q psy10738 142 ALYNLGNVYHAK-GKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 142 ~~~~lg~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 189 (609)
++..+|.++... |+ +++|+.++++++..
T Consensus 78 ~~~~l~~~~~~~~~~--------------------~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 78 VWAAKADALRYIEGK--------------------EVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHHTTCSSC--------------------SHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCC--------------------HHHHHHHHHHHhhc
Confidence 899999999999 99 99999999988754
No 199
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.75 E-value=9.1e-09 Score=86.58 Aligned_cols=86 Identities=12% Similarity=0.181 Sum_probs=49.5
Q ss_pred cCCHHHHHHHHHHHHHH---HHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHH
Q psy10738 113 MGKYDEAMVCCKRHLEI---SRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 113 ~g~~~~A~~~~~~al~l---~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 189 (609)
+|++++|+.+|++++++ .+ ....++.++|.+|...|+ +++|+.++++++++
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p------~~~~~~~~lg~~~~~~~~--------------------~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGK------DLAECYLGLGSTFRTLGE--------------------YRKAEAVLANGVKQ 56 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHH------HHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCc------cHHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHh
Confidence 45666666666666654 23 445566666666666666 66666666666655
Q ss_pred HHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy10738 190 MKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIA 230 (609)
Q Consensus 190 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 230 (609)
.+....++.++|.++...|++++|+.++++++...
T Consensus 57 ------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 57 ------FPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp ------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred ------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 22234556666666666666666666666666554
No 200
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.70 E-value=4.9e-07 Score=99.50 Aligned_cols=230 Identities=11% Similarity=-0.033 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHH
Q psy10738 39 RAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAM-QYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYD 117 (609)
Q Consensus 39 ~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~-~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~ 117 (609)
+.....|++++...|..+. +|...+..+...|+.++|. ..|++|+.. .|.....+...+......|+++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~----lW~~ya~~~~~~~~~~~a~r~il~rAi~~------~P~s~~Lwl~~a~~ee~~~~~e 395 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPE----IWFNMANYQGEKNTDSTVITKYLKLGQQC------IPNSAVLAFSLSEQYELNTKIP 395 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHH----HHHHHHHHHHHHSCCTTHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCCHH----HHHHHHHHHHhcCcHHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhCCHH
Confidence 4467889999999998754 8888999999999999997 999999876 4555677888999999999999
Q ss_pred HHHHHHHHHHHHHHH--------cCC--------cHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHH
Q psy10738 118 EAMVCCKRHLEISRQ--------LND--------KLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIK 181 (609)
Q Consensus 118 ~A~~~~~~al~l~~~--------~~d--------~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~ 181 (609)
+|...|++++...+. ... ......++...+......|. .+.|..
T Consensus 396 ~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~--------------------l~~AR~ 455 (679)
T 4e6h_A 396 EIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQG--------------------LAASRK 455 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCC--------------------HHHHHH
Confidence 999999999986431 110 00233456666666666676 777777
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHH
Q psy10738 182 YYEQNLALMKEINDTAAQGRACGNLGNTYYLLG-NFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAAS 260 (609)
Q Consensus 182 ~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 260 (609)
.|.+|++.... ....+|...|.+....| +++.|...|+.+++..+.... .+...+......|+.+.|.
T Consensus 456 vf~~A~~~~~~-----~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~------~w~~y~~fe~~~~~~~~AR 524 (679)
T 4e6h_A 456 IFGKCRRLKKL-----VTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGE------YINKYLDFLIYVNEESQVK 524 (679)
T ss_dssp HHHHHHHTGGG-----SCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHhcCC-----CChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchH------HHHHHHHHHHhCCCHHHHH
Confidence 77777654111 11223444455555544 377777777777776543222 3445555666677777777
Q ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 261 EHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 261 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
..|++++...+. ......++..........|+.+.+....+++.+..++
T Consensus 525 ~lferal~~~~~---~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P~ 573 (679)
T 4e6h_A 525 SLFESSIDKISD---SHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFPE 573 (679)
T ss_dssp HHHHHHTTTSSS---TTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHhcCC---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 777777765431 1112345555566666677777777777777666554
No 201
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.70 E-value=6.6e-09 Score=85.96 Aligned_cols=91 Identities=21% Similarity=0.274 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
+..+..+|.+++..|++++|+.+|++++.+ .+....++.++|.++...|++++|+.++++++.+.+..++....
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 77 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIR 77 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHH
Confidence 457899999999999999999999999998 67778999999999999999999999999999988766555566
Q ss_pred HHHHHHHHHHHHHcccc
Q psy10738 140 GRALYNLGNVYHAKGKA 156 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~ 156 (609)
..+++.+|.++...|++
T Consensus 78 ~~~~~~~~~~~~~~~~~ 94 (111)
T 2l6j_A 78 SKLQYRLELAQGAVGSV 94 (111)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhH
Confidence 88999999999999983
No 202
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.66 E-value=1.4e-08 Score=83.98 Aligned_cols=97 Identities=24% Similarity=0.258 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
.+...|..++..|++++|+..|+++++..|.++ .++..+|.++...|++++|+.++++++.+.+..++......++
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP----VGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 455679999999999999999999999999884 4889999999999999999999999998844433334448899
Q ss_pred HHHHHHHHHcCCHHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCK 124 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~ 124 (609)
+.+|.++...|+++.|+..++
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHHHhHhhhHhHHH
Confidence 999999999998887766544
No 203
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.65 E-value=1e-06 Score=97.01 Aligned_cols=228 Identities=6% Similarity=-0.098 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccc
Q psy10738 78 KAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAM-VCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKA 156 (609)
Q Consensus 78 ~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~-~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~ 156 (609)
.....|++++.. .+.....|...+..+...|+.++|. ..|++|+...+ .....+..++.+....|+
T Consensus 327 Rv~~~Ye~aL~~------~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P------~s~~Lwl~~a~~ee~~~~- 393 (679)
T 4e6h_A 327 RMTYVYMQAAQH------VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIP------NSAVLAFSLSEQYELNTK- 393 (679)
T ss_dssp HHHHHHHHHHHH------TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHH------cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhCC-
Confidence 345667777776 6667889999999999999999997 99999998665 234567788888899999
Q ss_pred cccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHH--------hCC--------hHHHHHHHHHHHHHHHHcCCHHHHH
Q psy10738 157 IGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKE--------IND--------TAAQGRACGNLGNTYYLLGNFKQAI 220 (609)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~--------~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~ 220 (609)
+++|...|++++..... ... ......+|...+.+....|+.+.|.
T Consensus 394 -------------------~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR 454 (679)
T 4e6h_A 394 -------------------IPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASR 454 (679)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred -------------------HHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHH
Confidence 99999999999876421 110 1124457778888888899999999
Q ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHH
Q psy10738 221 YYHQERLKIAREFGDKAAERRANSNLGNSHIFLG-EYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTA 299 (609)
Q Consensus 221 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 299 (609)
..|.+|++..+.... .+|...|.+....+ +++.|...|+.+++..+.. ...+...+......|+.+.|
T Consensus 455 ~vf~~A~~~~~~~~~-----~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~------~~~w~~y~~fe~~~~~~~~A 523 (679)
T 4e6h_A 455 KIFGKCRRLKKLVTP-----DIYLENAYIEYHISKDTKTACKVLELGLKYFATD------GEYINKYLDFLIYVNEESQV 523 (679)
T ss_dssp HHHHHHHHTGGGSCT-----HHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHhcCCCCh-----HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCc------hHHHHHHHHHHHhCCCHHHH
Confidence 999999876222211 24555666665654 5999999999999987653 44556677788889999999
Q ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy10738 300 IDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISK 351 (609)
Q Consensus 300 ~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~ 351 (609)
...|++++...+. ......++......-...|+.+.+....+++.+...
T Consensus 524 R~lferal~~~~~---~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P 572 (679)
T 4e6h_A 524 KSLFESSIDKISD---SHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFP 572 (679)
T ss_dssp HHHHHHHTTTSSS---TTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 9999999876542 123455777778888899999999999999988774
No 204
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.62 E-value=5.4e-08 Score=85.37 Aligned_cols=98 Identities=17% Similarity=0.234 Sum_probs=80.9
Q ss_pred HhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHHHHcCCcHHHHH
Q psy10738 72 YLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKY----------DEAMVCCKRHLEISRQLNDKLSEGR 141 (609)
Q Consensus 72 ~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~----------~~A~~~~~~al~l~~~~~d~~~~~~ 141 (609)
+.+.|++|+..+++++++ .|..+.++.++|.++...|++ ++|+..|++++++.+ ....
T Consensus 14 r~~~feeA~~~~~~Ai~l------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP------~~~~ 81 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKS------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDP------KKDE 81 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT------TCHH
T ss_pred HHhHHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCc------CcHH
Confidence 457899999999999999 889999999999999999876 599999999999988 6678
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALM 190 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 190 (609)
+++++|.+|...|.. .| -..++..++++|+.+|++|+++-
T Consensus 82 A~~~LG~ay~~lg~l-------~P--~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 82 AVWCIGNAYTSFAFL-------TP--DETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp HHHHHHHHHHHHHHH-------CC--CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccc-------Cc--chhhhhccHHHHHHHHHHHHHhC
Confidence 999999999998630 00 01222334999999999999983
No 205
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.60 E-value=4.4e-07 Score=73.79 Aligned_cols=72 Identities=11% Similarity=0.133 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcH
Q psy10738 60 SAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKL 137 (609)
Q Consensus 60 a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~ 137 (609)
..+++.+|.+|...|++++|+.+|++++++ .+....++..+|.+|...|++++|+.+|++++++.+..++..
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 78 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVET------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQK 78 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchh
Confidence 347888899999999999999999998888 666777888999999999999999999999998888666543
No 206
>2om2_B Regulator of G-protein signalling 14 goloco motif peptide; arginine finger, RGS14 goloco, signaling protein; HET: GDP; 2.20A {Homo sapiens} PDB: 1kjy_B* 3onw_C* 3qi2_C*
Probab=98.60 E-value=2.4e-08 Score=60.90 Aligned_cols=23 Identities=35% Similarity=0.589 Sum_probs=10.0
Q ss_pred chHHHHHHHhhhcchhhhcccCC
Q psy10738 537 DGFLDMLIRCQGARLEDQRSHLP 559 (609)
Q Consensus 537 ~~~~~~~~~~q~~r~~~qr~~~~ 559 (609)
|.||+||-|.|++|||||||.+.
T Consensus 3 e~ffdLLSR~Qs~R~dDQR~~l~ 25 (36)
T 2om2_B 3 EGLVELLNRVQSSGAHDQRGLLR 25 (36)
T ss_dssp HHHHHHHHHHHTCSCCSCSSSCC
T ss_pred hHHHHHHHHhccCcccccccccc
Confidence 34444444444444444444433
No 207
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.60 E-value=2.6e-07 Score=73.04 Aligned_cols=84 Identities=36% Similarity=0.584 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHH
Q psy10738 59 LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLS 138 (609)
Q Consensus 59 ~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~ 138 (609)
.+.+++.+|.++...|++++|+.++++++.. .+....++..+|.++...|++++|+.++++++.+.+ .
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p------~ 75 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP------N 75 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------T
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC------C
Confidence 4568899999999999999999999999988 566788999999999999999999999999998865 4
Q ss_pred HHHHHHHHHHHHHHcc
Q psy10738 139 EGRALYNLGNVYHAKG 154 (609)
Q Consensus 139 ~~~~~~~lg~~~~~~g 154 (609)
...++.++|.++...|
T Consensus 76 ~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 76 NAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 4568888998887654
No 208
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.56 E-value=7.6e-07 Score=70.27 Aligned_cols=82 Identities=29% Similarity=0.534 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
..+...|..+...|++++|+.+|+++++..|.+. .++..+|.++...|++++|+.++++++.+ .+....+
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~p~~~~~ 79 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA----EAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEA 79 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHHhhHHHHHHHHHHHHhc------CCCCHHH
Confidence 3445569999999999999999999999999874 48899999999999999999999999998 6777889
Q ss_pred HHHHHHHHHHcC
Q psy10738 103 SGNLGNTLKVMG 114 (609)
Q Consensus 103 ~~~lg~~~~~~g 114 (609)
+.++|.++...|
T Consensus 80 ~~~l~~~~~~~g 91 (91)
T 1na3_A 80 KQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 999999987765
No 209
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.53 E-value=7e-07 Score=74.43 Aligned_cols=87 Identities=18% Similarity=0.171 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHccccc
Q psy10738 78 KAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAI 157 (609)
Q Consensus 78 ~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~ 157 (609)
+|+..+++++.. .+....+++.+|.+|...|++++|+.+|++++.+.+ ....+++++|.+|...|+
T Consensus 3 ~a~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~g~-- 68 (115)
T 2kat_A 3 AITERLEAMLAQ------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP------TYSVAWKWLGKTLQGQGD-- 68 (115)
T ss_dssp CHHHHHHHHHTT------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHh------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC------CcHHHHHHHHHHHHHcCC--
Confidence 577888888876 667788999999999999999999999999999866 446689999999999999
Q ss_pred ccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCCh
Q psy10738 158 GKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDT 196 (609)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 196 (609)
+++|+.+|++++.+.+..++.
T Consensus 69 ------------------~~~A~~~~~~al~~~~~~~~~ 89 (115)
T 2kat_A 69 ------------------RAGARQAWESGLAAAQSRGDQ 89 (115)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHTCH
T ss_pred ------------------HHHHHHHHHHHHHhccccccH
Confidence 999999999999997766553
No 210
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.52 E-value=8.9e-07 Score=76.81 Aligned_cols=110 Identities=16% Similarity=0.132 Sum_probs=94.8
Q ss_pred CChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH---
Q psy10738 36 GDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKV--- 112 (609)
Q Consensus 36 g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~--- 112 (609)
+++++|+.+|+++.+.+... +. +|.+|...+.+++|+.+|+++.+. ..+.+++++|.+|..
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~------a~--lg~~y~~g~~~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G~g 72 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF------GC--LSLVSNSQINKQKLFQYLSKACEL--------NSGNGCRFLGDFYENGKY 72 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT------HH--HHHHTCTTSCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHCSS
T ss_pred cCHHHHHHHHHHHHcCCCHh------hh--HHHHHHcCCCHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHcCCC
Confidence 47899999999999987432 33 999999999999999999999875 456899999999999
Q ss_pred -cCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHH
Q psy10738 113 -MGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA----KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNL 187 (609)
Q Consensus 113 -~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 187 (609)
.+++++|+.+|+++.+. ....++++||.+|.. .++ +++|+.+|+++.
T Consensus 73 ~~~d~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G~g~~~d--------------------~~~A~~~~~~Aa 124 (138)
T 1klx_A 73 VKKDLRKAAQYYSKACGL--------NDQDGCLILGYKQYAGKGVVKN--------------------EKQAVKTFEKAC 124 (138)
T ss_dssp SCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCC--------------------HHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHCCCCCCcC--------------------HHHHHHHHHHHH
Confidence 89999999999999864 336689999999998 777 999999999988
Q ss_pred HH
Q psy10738 188 AL 189 (609)
Q Consensus 188 ~~ 189 (609)
+.
T Consensus 125 ~~ 126 (138)
T 1klx_A 125 RL 126 (138)
T ss_dssp HT
T ss_pred HC
Confidence 75
No 211
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.52 E-value=1.3e-05 Score=81.51 Aligned_cols=196 Identities=14% Similarity=0.121 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH-cCCHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL-LGNFKQ 218 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~ 218 (609)
-.+.+.||.+|...|+ +++-.+++......+..... ...+....++-..+.. -+..+.
T Consensus 19 e~~~~~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~k-ak~~k~v~~l~~~~~~~~~~~~~ 77 (394)
T 3txn_A 19 EQGILQQGELYKQEGK--------------------AKELADLIKVTRPFLSSISK-AKAAKLVRSLVDMFLDMDAGTGI 77 (394)
T ss_dssp HHHHHHHHHHHHHHTC--------------------HHHHHHHHHHTTTGGGGSCH-HHHHHHHHHHHHHHTTSCCCHHH
T ss_pred HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHHHHHhch-HHHHHHHHHHHHHHhcCCCcHHH
Confidence 3577899999999999 78777777665544433321 2223333333333332 355677
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPT 298 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 298 (609)
-++.+.++++.+....-.......-..+|.+|+..|+|.+|...+.+.+.......+......++.....+|...+++.+
T Consensus 78 ~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k 157 (394)
T 3txn_A 78 EVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPK 157 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHH
Confidence 78888888888876655444444566899999999999999999999999888887888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHcCCC
Q psy10738 299 AIDYHLRHLIIAQQL-MDRVGEGRACWSLGNAHA-ARGNHEKALYFATKHLEISKQLGDP 356 (609)
Q Consensus 299 A~~~~~~al~~~~~~-~~~~~~~~~~~~La~~~~-~~g~~~~A~~~~~~al~l~~~~~~~ 356 (609)
+..++.+|..+...+ .++...+.....-|.++. ..++|..|..+|-++..-+.+.+.+
T Consensus 158 ~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~ 217 (394)
T 3txn_A 158 ARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSV 217 (394)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccccccH
Confidence 999999999998876 667778888888999999 8999999999999998877766643
No 212
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.49 E-value=5.8e-07 Score=73.07 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Q psy10738 199 QGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD 275 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 275 (609)
...+++++|.+|...|++++|+.+|++++++.+.... ++.++|.+|...|++++|+.+|++++.+.+..++
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~------a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVG------TYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 3567888888888888888888888888887665544 7888888888888888888888888888877655
No 213
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.46 E-value=3.9e-05 Score=77.96 Aligned_cols=214 Identities=14% Similarity=0.050 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHcCCcHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKV-MGKYDEAMVCCKRHLEISRQLNDKLSE 139 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~~~d~~~~ 139 (609)
.+.+.||..|...|++++-.+++.........+. ....++....+-..+.. -+..+.-++.+..+++-+....-....
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr 98 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSIS-KAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLR 98 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSC-HHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999998888877665544332 22234444444444333 355677778888888877754443344
Q ss_pred HHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHH
Q psy10738 140 GRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQA 219 (609)
Q Consensus 140 ~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 219 (609)
...-..+|.+|+..|+ |.+|...+.+.+.-++...+......++.....+|..+|++.++
T Consensus 99 ~~l~~kL~~l~~~~~~--------------------y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~ 158 (394)
T 3txn_A 99 QSLEARLIALYFDTAL--------------------YTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKA 158 (394)
T ss_dssp HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhhh--------------------HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHH
Confidence 4466689999999999 99999999999998888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCH
Q psy10738 220 IYYHQERLKIAREF-GDKAAERRANSNLGNSHI-FLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDY 296 (609)
Q Consensus 220 ~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 296 (609)
..++.++....... .++...+.....-|.++. ..++|..|..+|-++..-+...+.+. ...+...++.+-...++.
T Consensus 159 k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~~-~~~~lkYlvL~aLl~~~r 236 (394)
T 3txn_A 159 RAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVK-ALTSLKYMLLCKIMLGQS 236 (394)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHHH-HHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccccccHH-HHHHHHHHHHHHHHcCCH
Confidence 99999999988775 677778888888999999 89999999999999876665444322 223333444455555553
No 214
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.44 E-value=6.5e-06 Score=82.32 Aligned_cols=141 Identities=15% Similarity=0.082 Sum_probs=107.8
Q ss_pred chhHHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHh---C-CHHHHHHHHHHHHHHH
Q psy10738 18 GGNMCLELALEGERLCKAGD---CRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYL---G-DYQKAMQYHKQDLTLA 90 (609)
Q Consensus 18 ~a~~~~~l~~~g~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~---g-~~~~A~~~~~~al~~~ 90 (609)
.....|+++++|..++..++ +.+|+.+|++|++++|+... ++..++.+|... + .......-+..++...
T Consensus 192 ~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~----A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~ 267 (372)
T 3ly7_A 192 HRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTY----ARAEKALVDIVRHSQHPLDEKQLAALNTEIDNI 267 (372)
T ss_dssp SSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHhccCCCchhhHHHHHHHHHHH
Confidence 34567899999999888765 48899999999999999855 444445544321 1 1123334444555544
Q ss_pred HHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCch
Q psy10738 91 RNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPE 170 (609)
Q Consensus 91 ~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~ 170 (609)
......+..+.++..++..+...|++++|+.++++|+.+.+ . ..++..+|.++...|+
T Consensus 268 ~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~------s-~~a~~llG~~~~~~G~--------------- 325 (372)
T 3ly7_A 268 VTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM------S-WLNYVLLGKVYEMKGM--------------- 325 (372)
T ss_dssp HTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC------C-HHHHHHHHHHHHHTTC---------------
T ss_pred HhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC------C-HHHHHHHHHHHHHCCC---------------
Confidence 44455677888999999999999999999999999999852 1 4577899999999999
Q ss_pred HhHHhHHHHHHHHHHHHHH
Q psy10738 171 EVKVCLQEAIKYYEQNLAL 189 (609)
Q Consensus 171 ~~~~~~~~A~~~~~~al~~ 189 (609)
+++|++.|.+|+.+
T Consensus 326 -----~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 326 -----NREAADAYLTAFNL 339 (372)
T ss_dssp -----HHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHhc
Confidence 99999999999988
No 215
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.41 E-value=7.6e-07 Score=71.84 Aligned_cols=89 Identities=18% Similarity=0.232 Sum_probs=73.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 26 ALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSA-IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 26 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~-~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
+..|..++..|++++|+..|+++++..|.+ .. +++.+|.+|...|++++|+.+|++++.+ .+....++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~ 73 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG----KDEAYYLMGNAYRKLGDWQKALNNYQSAIEL------NPDSPALQA 73 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST----HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTSTHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCcHHHHH
Confidence 456889999999999999999999999987 34 7899999999999999999999999998 555444443
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQ 132 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~ 132 (609)
+ +.+.+|+.+|++++...+.
T Consensus 74 ~--------~~~~~a~~~~~~~~~~~p~ 93 (99)
T 2kc7_A 74 R--------KMVMDILNFYNKDMYNQLE 93 (99)
T ss_dssp H--------HHHHHHHHHHCCTTHHHHC
T ss_pred H--------HHHHHHHHHHHHHhccCcc
Confidence 2 5677888888888777664
No 216
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.37 E-value=1.6e-06 Score=75.20 Aligned_cols=110 Identities=25% Similarity=0.332 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-
Q psy10738 74 GDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA- 152 (609)
Q Consensus 74 g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~- 152 (609)
+++++|+.+|+++.+. ... .+. +|.+|...+.+++|+.+|+++.+. ....+++++|.+|..
T Consensus 9 ~d~~~A~~~~~~aa~~------g~~--~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G 70 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL------NEM--FGC--LSLVSNSQINKQKLFQYLSKACEL--------NSGNGCRFLGDFYENG 70 (138)
T ss_dssp HHHHHHHHHHHHHHHT------TCT--THH--HHHHTCTTSCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHcC------CCH--hhh--HHHHHHcCCCHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHcC
Confidence 4677888888887765 211 222 888888888888888888888764 335678888888887
Q ss_pred ---cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHH
Q psy10738 153 ---KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL----LGNFKQAIYYHQE 225 (609)
Q Consensus 153 ---~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~ 225 (609)
.++ +++|+.+|+++.+. ++ ..++.+||.+|.. .+++++|+.+|++
T Consensus 71 ~g~~~d--------------------~~~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~ 122 (138)
T 1klx_A 71 KYVKKD--------------------LRKAAQYYSKACGL----ND----QDGCLILGYKQYAGKGVVKNEKQAVKTFEK 122 (138)
T ss_dssp SSSCCC--------------------HHHHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred CCCCcc--------------------HHHHHHHHHHHHcC----CC----HHHHHHHHHHHHCCCCCCcCHHHHHHHHHH
Confidence 566 88888888887653 22 4577888888888 7888888888888
Q ss_pred HHHH
Q psy10738 226 RLKI 229 (609)
Q Consensus 226 al~~ 229 (609)
+.+.
T Consensus 123 Aa~~ 126 (138)
T 1klx_A 123 ACRL 126 (138)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 7664
No 217
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.16 E-value=3.3e-05 Score=77.26 Aligned_cols=150 Identities=11% Similarity=0.005 Sum_probs=94.4
Q ss_pred HHHHhCCcchhHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCH----HHH
Q psy10738 47 AAIQAGTDDLRTLSAIYSQLGNAYFYLGD---YQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKY----DEA 119 (609)
Q Consensus 47 ~al~~~~~~~~~~a~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~----~~A 119 (609)
++....|.++..+ -++..|..+...+. +.+|+.+|++|+++ .|..+.++..++.+|.....+ ...
T Consensus 185 r~~~~~p~~~~Ay--dl~Lra~~~l~~~~~~~~~~A~~l~e~Al~l------DP~~a~A~A~la~a~~~~~~~~~~~~~~ 256 (372)
T 3ly7_A 185 TLQKILPHRGALL--TNFYQAHDYLLHGDDKSLNRASELLGEIVQS------SPEFTYARAEKALVDIVRHSQHPLDEKQ 256 (372)
T ss_dssp HHHHHSCSSGGGH--HHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHhccCCCCHHHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHhccCCCchhh
Confidence 4455567776633 45556666666544 58899999999999 888888888888887632111 112
Q ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHH
Q psy10738 120 MVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQ 199 (609)
Q Consensus 120 ~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 199 (609)
..-+.+++.........+..+.++..++.++...|+ +++|+.++++++.+- + .
T Consensus 257 ~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd--------------------~d~A~~~l~rAl~Ln------~-s 309 (372)
T 3ly7_A 257 LAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGK--------------------TDESYQAINTGIDLE------M-S 309 (372)
T ss_dssp HHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTC--------------------HHHHHHHHHHHHHHC------C-C
T ss_pred HHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCC--------------------HHHHHHHHHHHHhcC------C-C
Confidence 222333333222222233455566667776766777 777777777777762 1 1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 200 GRACGNLGNTYYLLGNFKQAIYYHQERLKIAR 231 (609)
Q Consensus 200 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 231 (609)
..++..+|.++...|++++|++.|.+|+.+.+
T Consensus 310 ~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 310 WLNYVLLGKVYEMKGMNREAADAYLTAFNLRP 341 (372)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 34556677777777777777777777776644
No 218
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.13 E-value=4.8e-06 Score=66.99 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=57.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 64 SQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAK-SSGNLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 64 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~-a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
+.+|.++...|++++|+..+++++.. .+.... +++.+|.+|...|++++|+.+|++++.+.+
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 56789999999999999999999998 666777 999999999999999999999999999876
No 219
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.09 E-value=0.00031 Score=67.35 Aligned_cols=92 Identities=14% Similarity=0.178 Sum_probs=76.5
Q ss_pred hHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Q psy10738 172 VKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLL-----GNFKQAIYYHQERLKIAREF-GDKAAERRANSN 245 (609)
Q Consensus 172 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~-----g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~ 245 (609)
+......|...+++++++- .....+.+|..+|.+|... |+.++|..+|++++++.+.. .+ +++.
T Consensus 175 Al~~l~~A~a~lerAleLD----P~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id------~~v~ 244 (301)
T 3u64_A 175 LPDTVHAAVMMLERACDLW----PSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPD------HHIT 244 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHC----TTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSH------HHHH
T ss_pred HHHhHHHHHHHHHHHHHhC----CCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCch------HHHH
Confidence 3445788888999998882 2344678999999999995 99999999999999998854 44 7888
Q ss_pred HHHHHHH-hCCHHHHHHHHHHHHHHHHHc
Q psy10738 246 LGNSHIF-LGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 246 la~~~~~-~g~~~~A~~~~~~al~~~~~~ 273 (609)
+|..+.. .|++++|..++++++...+..
T Consensus 245 YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 245 YADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 9999888 499999999999999877663
No 220
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.02 E-value=5.5e-05 Score=61.68 Aligned_cols=82 Identities=22% Similarity=0.198 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCch
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMD-RVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLG 358 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 358 (609)
+.-++.+|..+...|+|..|+.+|++|+........ ......++..||.++.++|++++|+.++++++.+. +.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~------P~ 78 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD------PE 78 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC------CC
Confidence 456789999999999999999999999987754321 24567789999999999999999999999999875 44
Q ss_pred HHHHHHHHH
Q psy10738 359 QVTAQMNVT 367 (609)
Q Consensus 359 ~~~a~~~la 367 (609)
...+..+++
T Consensus 79 ~~~~~~n~~ 87 (104)
T 2v5f_A 79 HQRANGNLK 87 (104)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHhhHH
Confidence 456666665
No 221
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.99 E-value=2.8e-05 Score=63.46 Aligned_cols=74 Identities=20% Similarity=0.254 Sum_probs=48.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHhCCcc---hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 28 EGERLCKAGDCRAGVAFFQAAIQAGTDD---LRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 28 ~g~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
.|..++..|+|..|+.+|++|++..+.+ ......++..+|.+++.+|+++.|+.++++++.+ .|....+..
T Consensus 11 lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l------~P~~~~~~~ 84 (104)
T 2v5f_A 11 LGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL------DPEHQRANG 84 (104)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHH
T ss_pred HHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc------CCCCHHHHh
Confidence 4777777777777777777777653211 1224567777777777777777777777777776 555555555
Q ss_pred HHH
Q psy10738 105 NLG 107 (609)
Q Consensus 105 ~lg 107 (609)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 222
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.98 E-value=0.0011 Score=70.49 Aligned_cols=188 Identities=10% Similarity=-0.036 Sum_probs=100.2
Q ss_pred hcC-CCcchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHH
Q psy10738 12 QSG-GADGGNMCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGD-YQKAMQYHKQDLTL 89 (609)
Q Consensus 12 ~~g-~~~~a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~-~~~A~~~~~~al~~ 89 (609)
..| +...+..+|+.+ ...+-.|+++.+..+|++++...| +.+ +|..........++ .+.....|+.++..
T Consensus 6 ~~~~~i~~aR~vyer~---l~~~P~~~~e~~~~iferal~~~p-s~~----LW~~Y~~f~~~~~~~~~~i~~~fe~al~~ 77 (493)
T 2uy1_A 6 KMGVELSSPSAIMEHA---RRLYMSKDYRSLESLFGRCLKKSY-NLD----LWMLYIEYVRKVSQKKFKLYEVYEFTLGQ 77 (493)
T ss_dssp ------CCHHHHHHHH---HHHHHTTCHHHHHHHHHHHSTTCC-CHH----HHHHHHHHHHHHC----CTHHHHHHHHHH
T ss_pred HcCcchHHHHHHHHHH---HHHCCCCCHHHHHHHHHHHhccCC-CHH----HHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 345 367777777654 445555999999999999999877 322 44444444334442 34456667776664
Q ss_pred HHHcCChhhHHHHHHHHHHHHH----HcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH--------------------
Q psy10738 90 ARNMEDKLGEAKSSGNLGNTLK----VMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYN-------------------- 145 (609)
Q Consensus 90 ~~~~~d~~~~~~a~~~lg~~~~----~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~-------------------- 145 (609)
.|.++.....|......+. ..|+.+.+...|++++.+ +. .+....-..|..
T Consensus 78 ---vg~d~~s~~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~-P~-~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~ 152 (493)
T 2uy1_A 78 ---FENYWDSYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQT-PM-GSLSELWKDFENFELELNKITGKKIVGDTLPI 152 (493)
T ss_dssp ---STTCTTCHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHTS-CC-TTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ---cCCCcccHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHhC-hh-hhHHHHHHHHHHHHHHhccccHHHHHHHHhHH
Confidence 2322333444444444332 245677788888888762 10 000000000000
Q ss_pred -----------------------HHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHH
Q psy10738 146 -----------------------LGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRA 202 (609)
Q Consensus 146 -----------------------lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 202 (609)
...+-+..++ +....+. .........|++++... +....+
T Consensus 153 y~~ar~~y~~~~~~~~~~s~~~W~~y~~~E~~~---------~~~~~~~--~~~~Rv~~~ye~al~~~------p~~~~l 215 (493)
T 2uy1_A 153 FQSSFQRYQQIQPLIRGWSVKNAARLIDLEMEN---------GMKLGGR--PHESRMHFIHNYILDSF------YYAEEV 215 (493)
T ss_dssp HHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHTC---------TTCCCHH--HHHHHHHHHHHHHHHHT------TTCHHH
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcC---------CccCcch--hhHHHHHHHHHHHHHcC------CCCHHH
Confidence 0000011111 1111110 11334556777766653 222567
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 203 CGNLGNTYYLLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 203 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 229 (609)
|...+..+...|+.+.|...|++|+..
T Consensus 216 W~~ya~~~~~~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 216 YFFYSEYLIGIGQKEKAKKVVERGIEM 242 (493)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 888888999999999999999999987
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.84 E-value=0.0003 Score=61.24 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhc----
Q psy10738 242 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD---RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLM---- 314 (609)
Q Consensus 242 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---- 314 (609)
++..-...++..|.|+.|+-....++.+.....+ +...+.++..+|.+++..|+|..|..+|++|+...+.+.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3444445555666666666666666655544322 445556666666666666666666666666665554321
Q ss_pred ---------------chhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q psy10738 315 ---------------DRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVTDLRK 371 (609)
Q Consensus 315 ---------------~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la~l~~ 371 (609)
+...+.++.+.+|.||.++|++++|+..+ +.+........+.+.||++|.
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~L-------e~Ip~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAIL-------DGIPSRQRTPKINMLLANLYK 166 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHH-------HTSCGGGCCHHHHHHHHHHCC
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHH-------hcCCchhcCHHHHHHHHHHhc
Confidence 11224578899999999999999987764 344445566777888888764
No 224
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.83 E-value=0.002 Score=68.37 Aligned_cols=19 Identities=11% Similarity=-0.083 Sum_probs=14.8
Q ss_pred cCChHHHHHHHHHHHHhCC
Q psy10738 35 AGDCRAGVAFFQAAIQAGT 53 (609)
Q Consensus 35 ~g~~~~A~~~~~~al~~~~ 53 (609)
.|+.+.+..+|++|+....
T Consensus 102 ~~~~~~vR~iy~rAL~~P~ 120 (493)
T 2uy1_A 102 QTRIEKIRNGYMRALQTPM 120 (493)
T ss_dssp HHHHHHHHHHHHHHHTSCC
T ss_pred hHHHHHHHHHHHHHHhChh
Confidence 3567889999999998543
No 225
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.82 E-value=0.00044 Score=60.16 Aligned_cols=125 Identities=16% Similarity=0.101 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC-
Q psy10738 200 GRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGD---KAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGD- 275 (609)
Q Consensus 200 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~- 275 (609)
.+++..-...++..|.|+.|+-....++.+.....+ +.....++..+|.+++..|+|..|..+|++++...+....
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 345666677788899999999999999988876554 5677889999999999999999999999999988764311
Q ss_pred ------------------cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Q psy10738 276 ------------------RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHA 331 (609)
Q Consensus 276 ------------------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~ 331 (609)
...+..+.+.++.||.++|++++|+..++ .+........+...||++|.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le-------~Ip~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD-------GIPSRQRTPKINMLLANLYK 166 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH-------TSCGGGCCHHHHHHHHHHCC
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh-------cCCchhcCHHHHHHHHHHhc
Confidence 11234788999999999999999988765 34444555667778887763
No 226
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.0058 Score=63.67 Aligned_cols=219 Identities=11% Similarity=0.015 Sum_probs=139.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-
Q psy10738 74 GDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA- 152 (609)
Q Consensus 74 g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~- 152 (609)
|+++.|++-+....+.++...|......+...+..++...|+++...+++.- +.+..+..............-|..
T Consensus 30 ~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~---Lskkr~qlk~ai~~~V~~~~~~l~~ 106 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTL---LSKKHGQLKLSIQYMIQKVMEYLKS 106 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHH---HHTTTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHH---HHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 5667777666554445555566666677777777777778887766555432 111122111111111111111111
Q ss_pred cccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCC-----hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy10738 153 KGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEIND-----TAAQGRACGNLGNTYYLLGNFKQAIYYHQERL 227 (609)
Q Consensus 153 ~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 227 (609)
... .+. ......+........ ....++....|+.+|...|++.+|...+....
T Consensus 107 ~~~--------------------~d~--~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~ 164 (445)
T 4b4t_P 107 SKS--------------------LDL--NTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQ 164 (445)
T ss_dssp HCT--------------------THH--HHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCc--------------------hhH--HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 111 111 111111111111111 12356677889999999999999999998876
Q ss_pred HHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy10738 228 KIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL-GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH 306 (609)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 306 (609)
.-.....+.......+.....+|...+++..|..++.++....... ..+......+...|.++...++|.+|..+|..+
T Consensus 165 ~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~ 244 (445)
T 4b4t_P 165 VETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEI 244 (445)
T ss_dssp HHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 5544455666777888999999999999999999999986544433 455567778888999999999999999999999
Q ss_pred HHHHHHhcchh
Q psy10738 307 LIIAQQLMDRV 317 (609)
Q Consensus 307 l~~~~~~~~~~ 317 (609)
.......++..
T Consensus 245 ~~~~~~~~d~~ 255 (445)
T 4b4t_P 245 YQTDAIKSDEA 255 (445)
T ss_dssp HHHHHHHSCHH
T ss_pred HhcccccCCHH
Confidence 98776655543
No 227
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.0038 Score=65.03 Aligned_cols=224 Identities=11% Similarity=-0.040 Sum_probs=146.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh
Q psy10738 114 GKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI 193 (609)
Q Consensus 114 g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 193 (609)
|+++.|++-+....+..+...|......++..+..++...|+ ++...+++.- +.+..
T Consensus 30 ~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~--------------------~~~l~e~i~~---Lskkr 86 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNK--------------------WDDLNEQLTL---LSKKH 86 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSC--------------------HHHHHHHHHH---HHTTT
T ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhcc--------------------HHHHHHHHHH---HHHHh
Confidence 567888877655555555556666677888888899999999 8776665432 22222
Q ss_pred CChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 194 NDTAAQGRACGNLGNTYY-LLGNFKQAIYYHQERLKIAREFG-----DKAAERRANSNLGNSHIFLGEYQAASEHYKRTL 267 (609)
Q Consensus 194 ~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 267 (609)
+..........+...-|. .....+.. .....+....... .....++....|+.+|...|++.+|...+....
T Consensus 87 ~qlk~ai~~~V~~~~~~l~~~~~~d~~--~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~ 164 (445)
T 4b4t_P 87 GQLKLSIQYMIQKVMEYLKSSKSLDLN--TRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQ 164 (445)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHCTTHHH--HHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcCCchhHH--HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 222211111111111111 12221111 1111111111111 112345677889999999999999999998876
Q ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q psy10738 268 VLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ-QLMDRVGEGRACWSLGNAHAARGNHEKALYFATKH 346 (609)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~a 346 (609)
.-.....+.......+.....+|...+++.+|..++.++..... ....+......+...|.++...++|.+|..+|.++
T Consensus 165 ~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~ 244 (445)
T 4b4t_P 165 VETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEI 244 (445)
T ss_dssp HHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 54444456666788888899999999999999999999865443 33445667788889999999999999999999999
Q ss_pred HHHHHHcCCCchHHHH
Q psy10738 347 LEISKQLGDPLGQVTA 362 (609)
Q Consensus 347 l~l~~~~~~~~~~~~a 362 (609)
.+.....+++.....+
T Consensus 245 ~~~~~~~~d~~~~~~~ 260 (445)
T 4b4t_P 245 YQTDAIKSDEAKWKPV 260 (445)
T ss_dssp HHHHHHHSCHHHHHHH
T ss_pred HhcccccCCHHHHHHH
Confidence 9988777765433333
No 228
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.59 E-value=0.00027 Score=56.18 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 62 IYSQLGNAYFYLGD---YQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQ 132 (609)
Q Consensus 62 ~~~~lg~~~~~~g~---~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 132 (609)
++..+|.+++..++ .++|..++++++.+ ++....+++.+|..++..|+|++|+.+++++++..+.
T Consensus 8 ~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 8 QLAAKATTLYYLHKQAMTDEVSLLLEQALQL------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 55666666655544 56666777777666 6666666667777777777777777777666655443
No 229
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.52 E-value=0.00065 Score=58.73 Aligned_cols=87 Identities=15% Similarity=0.049 Sum_probs=71.2
Q ss_pred ChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHc
Q psy10738 37 DCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLG---DYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVM 113 (609)
Q Consensus 37 ~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~ 113 (609)
....+...|.+.++.++.+. .+.+.+|+++...+ ++++++.+++..++.. .+.....+++++|..|+++
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~----~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~----~p~~~rd~lY~LAv~~~kl 84 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSK----STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG----SKEEQRDYVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCH----HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCCCcH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC----CccchHHHHHHHHHHHHHc
Confidence 34567777888887777553 47899999999988 6779999999988861 1225688999999999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy10738 114 GKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 114 g~~~~A~~~~~~al~l~~ 131 (609)
|+|++|..++++++++.|
T Consensus 85 ~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp SCHHHHHHHHHHHHHHCT
T ss_pred cCHHHHHHHHHHHHhcCC
Confidence 999999999999999877
No 230
>2xns_C RGS14, regulator of G-protein signaling 14; hydrolase-peptide complex, ADP-ribosylation, arginine finger binding, lipoprotein, nucleotide-binding; HET: GDP SRT; 3.41A {Homo sapiens}
Probab=97.51 E-value=4.3e-05 Score=46.39 Aligned_cols=23 Identities=48% Similarity=0.530 Sum_probs=20.6
Q ss_pred cchHHHHHhhhccCCCcccccCc
Q psy10738 443 EESFFELLSRFQSERMDDQRCSL 465 (609)
Q Consensus 443 ~~~f~~ll~~~q~~rmddqr~~~ 465 (609)
-|+||+||++.||.|-||||--|
T Consensus 2 ~e~~~EllsraQs~radDQRGLL 24 (40)
T 2xns_C 2 IEGLVELLNRVQSSGAHDQRGLL 24 (40)
T ss_dssp CCHHHHHHHHHTTCSCCSCSSSC
T ss_pred HHHHHHHHHHHHhcccccccccc
Confidence 48999999999999999999544
No 231
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.41 E-value=0.00058 Score=54.18 Aligned_cols=61 Identities=18% Similarity=0.095 Sum_probs=53.4
Q ss_pred HHHHHHHHHhcCC---hHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 25 LALEGERLCKAGD---CRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTL 89 (609)
Q Consensus 25 l~~~g~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 89 (609)
+...|..++..++ .++|..+++++++.+|+++. +++.+|..++..|+|++|+.+++++++.
T Consensus 9 ~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~r----A~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 9 LAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEA----ALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp HHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4445777776665 79999999999999999855 8899999999999999999999999886
No 232
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.32 E-value=0.00095 Score=64.02 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHcCChhhH-HHHHHHHHHHHH
Q psy10738 38 CRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYL-----GDYQKAMQYHKQDLTLARNMEDKLGE-AKSSGNLGNTLK 111 (609)
Q Consensus 38 ~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~-----g~~~~A~~~~~~al~~~~~~~d~~~~-~~a~~~lg~~~~ 111 (609)
...|...+++|++++|.... +.+|..+|.+|... |+.++|..+|++|+++ .+.. ..+++..|..+.
T Consensus 179 l~~A~a~lerAleLDP~~~~--GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L------nP~~~id~~v~YA~~l~ 250 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQE--GAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY------CSAHDPDHHITYADALC 250 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHH--HHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH------CCTTCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCccc--CHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh------CCCCCchHHHHHHHHHH
Confidence 57899999999999998443 66899999999995 9999999999999999 7754 889999999998
Q ss_pred H-cCCHHHHHHHHHHHHHHHHHc
Q psy10738 112 V-MGKYDEAMVCCKRHLEISRQL 133 (609)
Q Consensus 112 ~-~g~~~~A~~~~~~al~l~~~~ 133 (609)
. .|++++|..++++++...+..
T Consensus 251 ~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 251 IPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HhcCCHHHHHHHHHHHHcCCCCC
Confidence 8 499999999999999977753
No 233
>2xns_C RGS14, regulator of G-protein signaling 14; hydrolase-peptide complex, ADP-ribosylation, arginine finger binding, lipoprotein, nucleotide-binding; HET: GDP SRT; 3.41A {Homo sapiens}
Probab=97.14 E-value=0.00016 Score=43.90 Aligned_cols=19 Identities=26% Similarity=0.515 Sum_probs=10.2
Q ss_pred chHHHHHHhhhcccchhhh
Q psy10738 503 DDLLDMIVGLQSKRMDEQR 521 (609)
Q Consensus 503 ~~~~~~l~~~Q~~R~~~qr 521 (609)
|+||+||.+.|++|-||||
T Consensus 3 e~~~EllsraQs~radDQR 21 (40)
T 2xns_C 3 EGLVELLNRVQSSGAHDQR 21 (40)
T ss_dssp CHHHHHHHHHTTCSCCSCS
T ss_pred HHHHHHHHHHHhccccccc
Confidence 4555555555555555555
No 234
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.05 E-value=0.013 Score=62.01 Aligned_cols=162 Identities=12% Similarity=0.003 Sum_probs=116.4
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHHHHHhC---------CHHHHHHHHHHHHHHHHHcCChhh
Q psy10738 29 GERLCKAGDCRAGVAFFQAAIQAGTD-DLRTLSAIYSQLGNAYFYLG---------DYQKAMQYHKQDLTLARNMEDKLG 98 (609)
Q Consensus 29 g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~a~~~~~lg~~~~~~g---------~~~~A~~~~~~al~~~~~~~d~~~ 98 (609)
-..+++.|+.++|+.+|++..+.+-. + ...|..+-.++...+ ..++|...|++.... +-.|
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd----~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~----G~~P- 103 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLS----QYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD----KVVP- 103 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCC----HHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT----TCCC-
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCC----HhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh----CCCC-
Confidence 35678999999999999999886421 2 224555555554433 367788877765442 2222
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHH
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQE 178 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (609)
...+|..+-..|...|++++|...+++.... +-. ....+|..+-..|...|+ .++
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~----g~~-Pd~~tyn~lI~~~~~~g~--------------------~~~ 158 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAF----GIQ-PRLRSYGPALFGFCRKGD--------------------ADK 158 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TCC-CCHHHHHHHHHHHHHTTC--------------------HHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCC-CccceehHHHHHHHHCCC--------------------HHH
Confidence 3567888889999999999999999876542 211 234578888888999999 999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 179 AIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 179 A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 229 (609)
|.+.+++..+. +-.+ ...+|..+-..|...|+.++|.+++++..+.
T Consensus 159 A~~l~~~M~~~----G~~P-d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 159 AYEVDAHMVES----EVVP-EEPELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHHHHHHT----TCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc----CCCC-CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 99999876542 2222 2357888889999999999999999886543
No 235
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.97 E-value=0.0012 Score=57.03 Aligned_cols=88 Identities=16% Similarity=0.075 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLG---NFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIF 252 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 252 (609)
...+.+.|.+.+.. + +....+.+++|+++...+ +.++++..+++.++.. .+.....+++++|..|++
T Consensus 14 l~~~~~~y~~e~~~----~--~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~----~p~~~rd~lY~LAv~~~k 83 (152)
T 1pc2_A 14 LLKFEKKFQSEKAA----G--SVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG----SKEEQRDYVFYLAVGNYR 83 (152)
T ss_dssp HHHHHHHHHHHHHT----T--CCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcc----C--CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC----CccchHHHHHHHHHHHHH
Confidence 55566666655432 1 134568899999999988 6679999999988854 122345599999999999
Q ss_pred hCCHHHHHHHHHHHHHHHHHc
Q psy10738 253 LGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 253 ~g~~~~A~~~~~~al~~~~~~ 273 (609)
+|+|++|..+++.++++.|..
T Consensus 84 l~~Y~~A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 84 LKEYEKALKYVRGLLQTEPQN 104 (152)
T ss_dssp TSCHHHHHHHHHHHHHHCTTC
T ss_pred ccCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999988753
No 236
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.86 E-value=0.017 Score=61.24 Aligned_cols=168 Identities=13% Similarity=-0.010 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHHHHH
Q psy10738 62 IYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMG---------KYDEAMVCCKRHLEISRQ 132 (609)
Q Consensus 62 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g---------~~~~A~~~~~~al~l~~~ 132 (609)
++..+-..+.+.|++++|++.|++.... +-.+ ...+|..+-.++...+ ..++|...|++...
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M~~~----Gv~p-d~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~---- 98 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEARRN----GVQL-SQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIV---- 98 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHH----TCCC-CHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHc----CCCC-CHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHH----
Confidence 3455557788999999999999988764 2222 2334555544554433 36777777776543
Q ss_pred cCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy10738 133 LNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL 212 (609)
Q Consensus 133 ~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~ 212 (609)
.+-. ....+|..+-..|...|+ +++|...+++.... +-.+ ...+|..+-..|..
T Consensus 99 ~G~~-Pd~~tyn~lI~~~~~~g~--------------------~~~A~~l~~~M~~~----g~~P-d~~tyn~lI~~~~~ 152 (501)
T 4g26_A 99 DKVV-PNEATFTNGARLAVAKDD--------------------PEMAFDMVKQMKAF----GIQP-RLRSYGPALFGFCR 152 (501)
T ss_dssp TTCC-CCHHHHHHHHHHHHHHTC--------------------HHHHHHHHHHHHHT----TCCC-CHHHHHHHHHHHHH
T ss_pred hCCC-CCHHHHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHc----CCCC-ccceehHHHHHHHH
Confidence 2211 234578888999999999 99999999876432 2222 24578888889999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 213 LGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVL 269 (609)
Q Consensus 213 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 269 (609)
.|+.++|.+.+++..+. +-. .....|..+-..|...|+.++|.+++++..+.
T Consensus 153 ~g~~~~A~~l~~~M~~~----G~~-Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 153 KGDADKAYEVDAHMVES----EVV-PEEPELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp TTCHHHHHHHHHHHHHT----TCC-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc----CCC-CCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 99999999999887542 111 11237888999999999999999999886543
No 237
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.0088 Score=62.19 Aligned_cols=239 Identities=12% Similarity=0.008 Sum_probs=110.6
Q ss_pred HHHHHcCCHHHHHHHHHHHH--HHHHHcCC---cHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHH---
Q psy10738 108 NTLKVMGKYDEAMVCCKRHL--EISRQLND---KLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEA--- 179 (609)
Q Consensus 108 ~~~~~~g~~~~A~~~~~~al--~l~~~~~d---~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A--- 179 (609)
..+...+++++|..+....+ +.....+. ....+.+|+..+.++...|+ ....
T Consensus 144 i~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~--------------------~~~~~~~ 203 (523)
T 4b4t_S 144 LFLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLAR--------------------SSEEINS 203 (523)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcc--------------------ccccccc
Confidence 34556788999988887665 22222211 12456778888888877776 3332
Q ss_pred -------HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHH
Q psy10738 180 -------IKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREF-GDKAAERRANSNLGNSHI 251 (609)
Q Consensus 180 -------~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~ 251 (609)
...+..++..+.-..|....+..++.+-..|...+.|+.|..+..++. .+.. ......++.++.+|.++.
T Consensus 204 ~~~~~~ir~~Ll~~~rta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a 281 (523)
T 4b4t_S 204 DNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINA 281 (523)
T ss_dssp HHHHHHHHTHHHHHHHHCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHH
Confidence 122222222222235566778889999999999999999999998874 3332 334455778899999999
Q ss_pred HhCCHHHHHHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Q psy10738 252 FLGEYQAASEHYKRTLVLAQDLGD-RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAH 330 (609)
Q Consensus 252 ~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~ 330 (609)
.+++|.+|.+++..|+..++.... ......++-.+.-+-..+|+...-.-+-...+ ......|..|+.++
T Consensus 282 ~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~~a~K~lI~V~LLlG~iP~r~lf~q~~l---------~~~L~pY~~Lv~Av 352 (523)
T 4b4t_S 282 IQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQSNM---------QKSLLPYYHLTKAV 352 (523)
T ss_dssp HTTCHHHHHHHHHHHTSSCSCSSSCSHHHHHHHHHHHHHHHHHTCCCCHHHHTTTSC---------HHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCcchhhhhHHHHHHHHHHhHHhhcCCCCChHHhhchhH---------HHHHHHHHHHHHHH
Confidence 999999999999999887654322 22233343334444444677654221111000 01123456666664
Q ss_pred HHcCChHHHHHHHHHHHHHHHHcCCCchHHHHHHHHH-HHHHHcCCCCC
Q psy10738 331 AARGNHEKALYFATKHLEISKQLGDPLGQVTAQMNVT-DLRKALGMSTN 378 (609)
Q Consensus 331 ~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~a~~~la-~l~~~~g~~~~ 378 (609)
+.|+..+=...+++.-..+..-|......+...++- .....+...+.
T Consensus 353 -r~GdL~~F~~~L~~h~~~F~~Dgty~LI~rLr~~vir~~irkis~~Ys 400 (523)
T 4b4t_S 353 -KLGDLKKFTSTITKYKQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYK 400 (523)
T ss_dssp -HHTCHHHHHHHHHHTHHHHHHTTCTHHHHHHHHHHHHHHHHHSCCCSS
T ss_pred -HcCCHHHHHHHHHHhcceeccCChhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 557777766666666666666665544333333222 23344444443
No 238
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.018 Score=59.80 Aligned_cols=170 Identities=10% Similarity=0.075 Sum_probs=78.5
Q ss_pred HHHHHHhCCHHHHHHHHHHHH--HHHHHc---CChhhHHHHHHHHHHHHHHcCCHHHHHH----------HHHHHHHHHH
Q psy10738 67 GNAYFYLGDYQKAMQYHKQDL--TLARNM---EDKLGEAKSSGNLGNTLKVMGKYDEAMV----------CCKRHLEISR 131 (609)
Q Consensus 67 g~~~~~~g~~~~A~~~~~~al--~~~~~~---~d~~~~~~a~~~lg~~~~~~g~~~~A~~----------~~~~al~l~~ 131 (609)
-..++..+++++|..+....+ ...... .-+...+++|+..+.++...|+...... .+..++..+.
T Consensus 143 ~i~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~ 222 (523)
T 4b4t_S 143 QLFLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIAS 222 (523)
T ss_dssp ------------------------------------------------------------CHHHHHHHHTHHHHHHHHCC
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHh
Confidence 334556788999988877665 222222 1134567888888888888888765432 2222223222
Q ss_pred HcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHH
Q psy10738 132 QLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEI-NDTAAQGRACGNLGNTY 210 (609)
Q Consensus 132 ~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~~ 210 (609)
-..|....+..++.+-..|...+. |+.|..+..++. +... ......++.++.+|.++
T Consensus 223 lr~D~~~qa~l~nllLRnYL~~~~--------------------y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~ 280 (523)
T 4b4t_S 223 LKHDNETKAMLINLILRDFLNNGE--------------------VDSASDFISKLE--YPHTDVSSSLEARYFFYLSKIN 280 (523)
T ss_dssp SCSSSCHHHHHHHHHHHHHHHSSC--------------------STTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHH
T ss_pred cccCcchhHHHHHHHHHHHHccCc--------------------HHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHH
Confidence 235666888899999999999999 999999888774 2221 33456688999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHhCCHHH
Q psy10738 211 YLLGNFKQAIYYHQERLKIAREFGD-KAAERRANSNLGNSHIFLGEYQA 258 (609)
Q Consensus 211 ~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~la~~~~~~g~~~~ 258 (609)
...++|.+|.+++..|+..++.... ......++-.+..+-+.+|+...
T Consensus 281 a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~~a~K~lI~V~LLlG~iP~ 329 (523)
T 4b4t_S 281 AIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMGDIPE 329 (523)
T ss_dssp HHTTCHHHHHHHHHHHTSSCSCSSSCSHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHhccHHHHHHHHHHHHHhCCcchhhhhHHHHHHHHHHhHHhhcCCCCC
Confidence 9999999999999999987765332 22233344444444444677543
No 239
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.0093 Score=61.84 Aligned_cols=104 Identities=16% Similarity=0.057 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHH
Q psy10738 242 ANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGR 321 (609)
Q Consensus 242 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 321 (609)
++..+|..|...|+++.|.+.|.++.......+. ....+..+..++...+++..+..++.++..+....+++.....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~---kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA---KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH---HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 4444555555555555555555554443322211 2334444455555555555555555555554444444444444
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy10738 322 ACWSLGNAHAARGNHEKALYFATKHLE 348 (609)
Q Consensus 322 ~~~~La~~~~~~g~~~~A~~~~~~al~ 348 (609)
.....|.++...++|..|..+|-.+..
T Consensus 210 lk~~~gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 210 YKTYYGIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHHHHHHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHhc
Confidence 444445555555555555555554443
No 240
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.019 Score=59.50 Aligned_cols=127 Identities=15% Similarity=0.113 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHH-cCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccc
Q psy10738 80 MQYHKQDLTLARN-MEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIG 158 (609)
Q Consensus 80 ~~~~~~al~~~~~-~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~ 158 (609)
++-+...+..+.+ .........++..+|..|...|++++|.++|.++.......+ .....+..+..++...++
T Consensus 110 l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~---~kid~~l~~irl~l~~~d--- 183 (429)
T 4b4t_R 110 IKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG---AKIDVMLTIARLGFFYND--- 183 (429)
T ss_dssp HHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC---SHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH---HHHHHHHHHHHHHHHhcc---
Confidence 3445555554443 222334566888999999999999999999999887665333 456788888889999999
Q ss_pred cCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 159 KVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 229 (609)
+..+..++.++..+....+++..........|.++...++|..|..+|..+...
T Consensus 184 -----------------~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 184 -----------------QLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp -----------------HHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 999999999999888877887777777788888899999999999999887654
No 241
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=95.54 E-value=0.076 Score=44.03 Aligned_cols=87 Identities=13% Similarity=0.012 Sum_probs=65.8
Q ss_pred ChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHc
Q psy10738 37 DCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQK---AMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVM 113 (609)
Q Consensus 37 ~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~---A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~ 113 (609)
....+...|.+.+..++.. ..+.+.+|+++....+... ++..++..+.. +++...-.+++.+|..+++.
T Consensus 16 ~l~~~~~~y~~e~~~~~~s----~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~----~~p~~~Rd~lY~LAvg~ykl 87 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVS----KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK----GSKEEQRDYVFYLAVGNYRL 87 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCC----HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT----SCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCCCc----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----CCcchHHHHHHHHHHHHHHh
Confidence 4456677777777766544 3477889999988877665 66666665443 22336778999999999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy10738 114 GKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 114 g~~~~A~~~~~~al~l~~ 131 (609)
|+|++|..+++..+++-|
T Consensus 88 g~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 88 KEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp TCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHHHHhCC
Confidence 999999999999998866
No 242
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.44 E-value=0.7 Score=51.62 Aligned_cols=26 Identities=27% Similarity=0.158 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy10738 201 RACGNLGNTYYLLGNFKQAIYYHQER 226 (609)
Q Consensus 201 ~~~~~lg~~~~~~g~~~~A~~~~~~a 226 (609)
..|..+|..+...|+++.|+.+|.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 36777888888888888888887765
No 243
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.25 E-value=1.3 Score=49.32 Aligned_cols=101 Identities=10% Similarity=0.046 Sum_probs=63.1
Q ss_pred HHHHhcCChHHHHH-HHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q psy10738 30 ERLCKAGDCRAGVA-FFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGN 108 (609)
Q Consensus 30 ~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~ 108 (609)
......+++++|.. ++.. -++ .. .+..+...+...|.++.|+...+. .... ..
T Consensus 607 ~~~~~~~~~~~a~~~~l~~----i~~-~~----~~~~~~~~l~~~~~~~~a~~~~~~----------~~~~-------f~ 660 (814)
T 3mkq_A 607 QTLTLRGEIEEAIENVLPN----VEG-KD----SLTKIARFLEGQEYYEEALNISPD----------QDQK-------FE 660 (814)
T ss_dssp HHHHHTTCHHHHHHHTGGG----CCC-HH----HHHHHHHHHHHTTCHHHHHHHCCC----------HHHH-------HH
T ss_pred hHHHHhCCHHHHHHHHHhc----CCc-hH----HHHHHHHHHHhCCChHHheecCCC----------cchh-------ee
Confidence 44556788888866 4411 110 00 124555666778888887765532 1111 22
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHH
Q psy10738 109 TLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNL 187 (609)
Q Consensus 109 ~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 187 (609)
.....|++++|.+.++. ..+ ...+..+|..+...|+ ++.|+.+|.++-
T Consensus 661 ~~l~~~~~~~A~~~~~~-------~~~----~~~W~~la~~al~~~~--------------------~~~A~~~y~~~~ 708 (814)
T 3mkq_A 661 LALKVGQLTLARDLLTD-------ESA----EMKWRALGDASLQRFN--------------------FKLAIEAFTNAH 708 (814)
T ss_dssp HHHHHTCHHHHHHHHTT-------CCC----HHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHT
T ss_pred hhhhcCCHHHHHHHHHh-------hCc----HhHHHHHHHHHHHcCC--------------------HHHHHHHHHHcc
Confidence 34667888888876532 222 2478899999999999 999999888753
No 244
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.65 E-value=0.55 Score=39.95 Aligned_cols=91 Identities=12% Similarity=0.021 Sum_probs=72.2
Q ss_pred hcCCh------HHHHHHHHHHHHhCCcc----hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHH
Q psy10738 34 KAGDC------RAGVAFFQAAIQAGTDD----LRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSS 103 (609)
Q Consensus 34 ~~g~~------~~A~~~~~~al~~~~~~----~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~ 103 (609)
+.|+. +.-++.|++|+..-|.. .+.++.+|...|.. ...++.++|...|+.++.+ ....+.+|
T Consensus 25 ~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~------hKkFAKiw 97 (161)
T 4h7y_A 25 KNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN------CKKFAFVH 97 (161)
T ss_dssp HHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH------CTTBHHHH
T ss_pred HcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH------hHHHHHHH
Confidence 33888 88899999999876632 23355556666644 5668999999999999997 22238999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 104 GNLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 104 ~~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
...|..-..+|+...|...+.+|+.+.+
T Consensus 98 i~~AqFEiRqgnl~kARkILg~AiG~~~ 125 (161)
T 4h7y_A 98 ISFAQFELSQGNVKKSKQLLQKAVERGA 125 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHhccCC
Confidence 9999999999999999999999998654
No 245
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=94.47 E-value=3.8 Score=39.75 Aligned_cols=147 Identities=9% Similarity=-0.138 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHcCC-cHHH
Q psy10738 202 ACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGE-YQAASEHYKRTLVLAQDLGD-RAVE 279 (609)
Q Consensus 202 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~al~~~~~~~~-~~~~ 279 (609)
.++.-+..+...|++..|.+...-.++...+.+.+... .....+..++..... -..=..++++++....+.+. +.+.
T Consensus 55 lL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~-~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gd 133 (312)
T 2wpv_A 55 LISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDD-ISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGD 133 (312)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSH-HHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCC
T ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH-HHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCC
Confidence 33344444455566666655555555555443322111 122233333332221 11235778888888887754 5566
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH-----H-------HHHHHh--cchhhHHHHHHHHH-HHHHHcCChHHHHHHHH
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRH-----L-------IIAQQL--MDRVGEGRACWSLG-NAHAARGNHEKALYFAT 344 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~a-----l-------~~~~~~--~~~~~~~~~~~~La-~~~~~~g~~~~A~~~~~ 344 (609)
...+..+|..|...|++.+|..+|-.. . +..... +. ......+...+ ..|..+|+...|...+.
T Consensus 134 p~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~-~~e~dlf~~RaVL~yL~l~n~~~A~~~~~ 212 (312)
T 2wpv_A 134 PYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIE-DSTVAEFFSRLVFNYLFISNISFAHESKD 212 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCC-HHHHHHHHHHHHHHHHHTTBHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCC-cchHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 788999999999999999999988421 1 111111 11 12233333333 34556777777777766
Q ss_pred HHHHHH
Q psy10738 345 KHLEIS 350 (609)
Q Consensus 345 ~al~l~ 350 (609)
......
T Consensus 213 ~f~~~~ 218 (312)
T 2wpv_A 213 IFLERF 218 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 246
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=94.46 E-value=0.28 Score=40.63 Aligned_cols=63 Identities=16% Similarity=0.187 Sum_probs=51.9
Q ss_pred HHHHHHHHHhcCChHH---HHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 25 LALEGERLCKAGDCRA---GVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTL 89 (609)
Q Consensus 25 l~~~g~~~~~~g~~~~---A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 89 (609)
.+.-|+.+.+..+... +|.+++..+..+ ++...-.+++.+|..++++|+|++|..+++..|+.
T Consensus 38 ~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~--~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 38 QFEYAWCLVRTRYNDDIRKGIVLLEELLPKG--SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3344788888887766 999999988864 23344678999999999999999999999999998
No 247
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.27 E-value=0.82 Score=46.34 Aligned_cols=105 Identities=10% Similarity=-0.027 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcch------------------hHHHHHHHHHHHHHHHhCCHHHHHHH
Q psy10738 21 MCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDL------------------RTLSAIYSQLGNAYFYLGDYQKAMQY 82 (609)
Q Consensus 21 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~------------------~~~a~~~~~lg~~~~~~g~~~~A~~~ 82 (609)
.+..+...|......|+...|...+.+|+.+..++. .....+...++..+...|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 344556667777788999999999999999743210 12234455677888899999999999
Q ss_pred HHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 83 HKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 83 ~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
+..++.. .|..-.++..+-.++...|+..+|+..|++......
T Consensus 194 l~~~~~~------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~ 236 (388)
T 2ff4_A 194 LEALTFE------HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLA 236 (388)
T ss_dssp HHHHHHH------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 9999888 777777899999999999999999999998877543
No 248
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.25 E-value=0.48 Score=40.34 Aligned_cols=102 Identities=12% Similarity=-0.019 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q psy10738 242 ANSNLGNSHIFLGEY------QAASEHYKRTLVLAQDLG--DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL 313 (609)
Q Consensus 242 ~~~~la~~~~~~g~~------~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 313 (609)
.|..........|+. ++-++.|++|+...+... .....+..+...|.. ...++.++|...|+.++.+.+
T Consensus 15 ~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hK-- 91 (161)
T 4h7y_A 15 DWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCK-- 91 (161)
T ss_dssp HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhH--
Confidence 444445555555777 777788888887665432 223345556666644 566999999999999998621
Q ss_pred cchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q psy10738 314 MDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 314 ~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~ 350 (609)
. . +.+|...|+...++|+..+|...+.+|+.+.
T Consensus 92 --k-F-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 92 --K-F-AFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp --T-B-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred --H-H-HHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 1 2 8899999999999999999999999999854
No 249
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.93 E-value=0.74 Score=38.82 Aligned_cols=47 Identities=17% Similarity=0.231 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 40 AGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTL 89 (609)
Q Consensus 40 ~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 89 (609)
+++.+++..+...|.. .-.+++.+|..++++|+|++|..+.+..|+.
T Consensus 60 ~GI~LLe~l~~~~~~~---~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 60 LGVKILTDIYKEAESR---RRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHHHCCST---HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCccc---hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4555555555544332 1234455555555555555555555555444
No 250
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.85 E-value=1.2 Score=39.14 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=34.2
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 70 YFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEI 129 (609)
Q Consensus 70 ~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 129 (609)
....|+++.|.+..+.. .....|..+|......|+++-|..+|.++-+.
T Consensus 15 AL~lg~l~~A~e~a~~l-----------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----------NDSITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHhcCCHHHHHHHHHHh-----------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 34668888877765432 12456788888888888888888888765443
No 251
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=93.80 E-value=0.7 Score=38.42 Aligned_cols=31 Identities=16% Similarity=0.049 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy10738 100 AKSSGNLGNTLKVMGKYDEAMVCCKRHLEIS 130 (609)
Q Consensus 100 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 130 (609)
-..++.+|..++++|+|++|..+.+..+++-
T Consensus 78 Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 78 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Confidence 4444444444444444444444444444443
No 252
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.91 E-value=0.7 Score=50.79 Aligned_cols=121 Identities=12% Similarity=0.049 Sum_probs=84.5
Q ss_pred cCC-hHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHH----cC--C------hhh
Q psy10738 35 AGD-CRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYF---YLGDYQKAMQYHKQDLTLARN----ME--D------KLG 98 (609)
Q Consensus 35 ~g~-~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~---~~g~~~~A~~~~~~al~~~~~----~~--d------~~~ 98 (609)
.|. ++.|+.++++.....|.... ++..+.+.. ...+--+|+....++++.... .. + .+.
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~-----~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~ 335 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDI-----YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNC 335 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhH-----HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCc
Confidence 344 58899999999888876432 222222221 123445677777777653221 10 0 122
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHH
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQE 178 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (609)
....+...+..+...|+|+-|+.+.++|+...+ ....+|+.|+.+|..+|+ |+.
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aP------seF~tW~~La~vYi~l~d--------------------~e~ 389 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELAL------DSFESWYNLARCHIKKEE--------------------YEK 389 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS------SCHHHHHHHHHHHHHTTC--------------------HHH
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCc------hhhHHHHHHHHHHHHhcc--------------------HHH
Confidence 244566678888899999999999999999988 678899999999999999 999
Q ss_pred HHHHHHHH
Q psy10738 179 AIKYYEQN 186 (609)
Q Consensus 179 A~~~~~~a 186 (609)
|+-.+..+
T Consensus 390 ALLtLNSc 397 (754)
T 4gns_B 390 ALFAINSM 397 (754)
T ss_dssp HHHHHHHS
T ss_pred HHHHHhcC
Confidence 98776554
No 253
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=92.58 E-value=7 Score=43.89 Aligned_cols=190 Identities=14% Similarity=0.057 Sum_probs=102.2
Q ss_pred HHHhcCChHHHHHHHHHHHHhC-CcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-cCC---hhhHHHHHHH
Q psy10738 31 RLCKAGDCRAGVAFFQAAIQAG-TDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARN-MED---KLGEAKSSGN 105 (609)
Q Consensus 31 ~~~~~g~~~~A~~~~~~al~~~-~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~d---~~~~~~a~~~ 105 (609)
-....|+.++++..+.+.+... .+++...+.+++.+|.++...++ +++.++...+.-... .++ ......+...
T Consensus 383 GlIh~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~--~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLG 460 (963)
T 4ady_A 383 GVIHKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGR--DTTDYLKNIIVENSGTSGDEDVDVLLHGASLG 460 (963)
T ss_dssp HHHTSSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTH--HHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHH
T ss_pred hhhccCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcH--HHHHHHHHHHcCccccccccccHHHHHHHHHH
Confidence 3456788888888887766532 34555667788888888776663 677777766554210 011 2233446668
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHH
Q psy10738 106 LGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQ 185 (609)
Q Consensus 106 lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 185 (609)
||.++.-.++ +++...+...+.- .+......+-..+|.++...|+ .++++.+
T Consensus 461 LGla~~GS~~-eev~e~L~~~L~d----d~~~~~~~AalALGli~vGTgn---------------------~~ai~~L-- 512 (963)
T 4ady_A 461 IGLAAMGSAN-IEVYEALKEVLYN----DSATSGEAAALGMGLCMLGTGK---------------------PEAIHDM-- 512 (963)
T ss_dssp HHHHSTTCCC-HHHHHHHHHHHHT----CCHHHHHHHHHHHHHHHTTCCC---------------------HHHHHHH--
T ss_pred HHHHhcCCCC-HHHHHHHHHHHhc----CCHHHHHHHHHHHhhhhcccCC---------------------HHHHHHH--
Confidence 8888777766 3455555554431 1111223466678888888887 3333222
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHH
Q psy10738 186 NLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQ 257 (609)
Q Consensus 186 al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 257 (609)
+..+.+..+...... ..+|......|+.+.+....+. .....++.....+...+|..|...|+..
T Consensus 513 -L~~~~e~~~e~vrR~--aalgLGll~~g~~e~~~~li~~----L~~~~dp~vRygaa~alglAyaGTGn~~ 577 (963)
T 4ady_A 513 -FTYSQETQHGNITRG--LAVGLALINYGRQELADDLITK----MLASDESLLRYGGAFTIALAYAGTGNNS 577 (963)
T ss_dssp -HHHHHHCSCHHHHHH--HHHHHHHHTTTCGGGGHHHHHH----HHHCSCHHHHHHHHHHHHHHTTTSCCHH
T ss_pred -HHHHhccCcHHHHHH--HHHHHHhhhCCChHHHHHHHHH----HHhCCCHHHHHHHHHHHHHHhcCCCCHH
Confidence 222222222222222 2333333345665544433332 2233444444445556677777777754
No 254
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.34 E-value=3.1 Score=36.58 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=60.1
Q ss_pred HHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q psy10738 30 ERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNT 109 (609)
Q Consensus 30 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~ 109 (609)
......|+++.|.+..+.. ++ ...|..+|......|+++-|..+|.++-.. ..+..+
T Consensus 13 ~LAL~lg~l~~A~e~a~~l-----~~----~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~--------------~~L~~L 69 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL-----ND----SITWERLIQEALAQGNASLAEMIYQTQHSF--------------DKLSFL 69 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH-----CC----HHHHHHHHHHHHHTTCHHHHHHHHHHTTCH--------------HHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHh-----CC----HHHHHHHHHHHHHcCChHHHHHHHHHhCCH--------------HHHHHH
Confidence 3457889999999987764 22 337999999999999999999999876544 233455
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHccc
Q psy10738 110 LKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 110 ~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~ 155 (609)
|...|+.+.-. +..+++...++ +.....++...|+
T Consensus 70 y~~tg~~e~L~----kla~iA~~~g~-------~n~af~~~l~lGd 104 (177)
T 3mkq_B 70 YLVTGDVNKLS----KMQNIAQTRED-------FGSMLLNTFYNNS 104 (177)
T ss_dssp HHHHTCHHHHH----HHHHHHHHTTC-------HHHHHHHHHHHTC
T ss_pred HHHhCCHHHHH----HHHHHHHHCcc-------HHHHHHHHHHcCC
Confidence 56666664433 23333332222 2233445667788
No 255
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=91.16 E-value=11 Score=36.37 Aligned_cols=105 Identities=7% Similarity=-0.100 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHH
Q psy10738 100 AKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEA 179 (609)
Q Consensus 100 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A 179 (609)
...++.-+..+...|++..|.+...-.++...+.+.+.. ......+..++..... + -..=
T Consensus 53 idlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~-~~~~~rl~~l~~~~p~-----------~--------~~~r 112 (312)
T 2wpv_A 53 IELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVD-DISVARLVRLIAELDP-----------S--------EPNL 112 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCS-HHHHHHHHHHHTTCCT-----------T--------CTTH
T ss_pred HHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHHHCCC-----------C--------CchH
Confidence 333444445555667777777776666666665544432 2233344444444332 0 0112
Q ss_pred HHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy10738 180 IKYYEQNLALMKEIND-TAAQGRACGNLGNTYYLLGNFKQAIYYHQ 224 (609)
Q Consensus 180 ~~~~~~al~~~~~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 224 (609)
..+..++++...+.++ +......+..+|..|+..|++.+|..+|-
T Consensus 113 ~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 113 KDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 4556666766666543 33445688889999999998888887774
No 256
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=89.60 E-value=2.4 Score=46.62 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=66.0
Q ss_pred ChHHHHHHHHHHHHh--------CCcch------hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 37 DCRAGVAFFQAAIQA--------GTDDL------RTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 37 ~~~~A~~~~~~al~~--------~~~~~------~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
+--+|+.++.++++. .+.+. .....++...+..+...|+|+-|+++.++|+.. .|.....
T Consensus 300 ~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~------aPseF~t 373 (754)
T 4gns_B 300 KELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL------ALDSFES 373 (754)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSSCHHH
T ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc------CchhhHH
Confidence 344678888877752 22221 112346677788888999999999999999999 8889999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRH 126 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~a 126 (609)
|+.|+.+|..+|+|+.|+-.++.+
T Consensus 374 W~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 374 WYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccHHHHHHHHhcC
Confidence 999999999999999999877644
No 257
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.23 E-value=10 Score=44.25 Aligned_cols=206 Identities=10% Similarity=-0.000 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHH-----------------HHhCChHHHHHHHH
Q psy10738 142 ALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALM-----------------KEINDTAAQGRACG 204 (609)
Q Consensus 142 ~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-----------------~~~~~~~~~~~~~~ 204 (609)
..+.+|.++...|+ +++|..+|+++-... ............|.
T Consensus 844 ~~yl~g~~~L~~ge--------------------~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~ 903 (1139)
T 4fhn_B 844 AVYLKALIYLKSKE--------------------AVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYL 903 (1139)
T ss_dssp HHHHHHHHHHHTTC--------------------HHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHH
T ss_pred HHHHHHHHHHhcCC--------------------HHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHH
Confidence 34889999999999 999999998863211 00011111235677
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Q psy10738 205 NLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACY 284 (609)
Q Consensus 205 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 284 (609)
.+..++...|.++.++++.+.|++.... .+.......|.++=..+...|+|++|...+... +.... ...++.
T Consensus 904 hv~~LFe~~~~~~~vi~fa~lAi~~~~~-~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~----pd~~~---r~~cLr 975 (1139)
T 4fhn_B 904 HLSKKLFEESAYIDALEFSLLADASKET-DDEDLSIAITHETLKTACAAGKFDAAHVALMVL----STTPL---KKSCLL 975 (1139)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHCCS-CCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH----HHSSS---CHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhccC-CChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC----CCHHH---HHHHHH
Confidence 8888999999999999999999876432 333344457888888999999999997666322 22111 122333
Q ss_pred HHHHHHHHhCCH------------HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHH
Q psy10738 285 SLGNTYTLLRDY------------PTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEK-ALYFATKHLEISK 351 (609)
Q Consensus 285 ~la~~~~~~g~~------------~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~-A~~~~~~al~l~~ 351 (609)
.|-......|.. ++-...+..- ++...+.......|..|--.+...||+.+ |...|+.+..+..
T Consensus 976 ~LV~~lce~~~~~~L~~lpf~gl~~~Vd~IL~~k---Ar~~~~~~~~p~Yy~iLYs~ri~r~dyR~AA~vmYe~~~RL~~ 1052 (1139)
T 4fhn_B 976 DFVNQLTKQGKINQLLNYSMPTLRQDVDNLLERK---AFQMINVESQPCWYNILFSWRYKHQNYRDAAAIIYEKLSRYIS 1052 (1139)
T ss_dssp HHHHHHHHHCCHHHHHHHTTTSCHHHHHHHHHHH---HHHHHHHCCSTHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCChhhhhCCCCccHHHHHHHHHHHH---HHhCCccccCCCHHHHhHhhhhccCChHHHHHHHHHHHHHhhh
Confidence 333333444433 3332222211 11111111112245555666777888875 4556777777655
Q ss_pred HcCCC-----chHHHHHHHHHHHHHHcCCCCCC
Q psy10738 352 QLGDP-----LGQVTAQMNVTDLRKALGMSTND 379 (609)
Q Consensus 352 ~~~~~-----~~~~~a~~~la~l~~~~g~~~~a 379 (609)
..... ....+++..+-.++.... ++.|
T Consensus 1053 ~~~~~~~~~~~~q~~~yL~~INaLslvd-~~~a 1084 (1139)
T 4fhn_B 1053 TTELIGKKERTFIIEHYLIVLNTLELLP-KEDT 1084 (1139)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHHHHHSC-SSCC
T ss_pred ccccccchhHHHHHHHHHHHHHHHhcCC-hhhC
Confidence 33221 134566677777777774 4444
No 258
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=88.58 E-value=5.9 Score=32.86 Aligned_cols=67 Identities=9% Similarity=-0.022 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q psy10738 279 EAQACYSLGNTYTLLRDY---PTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g~~---~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~ 350 (609)
...+.+++|+++.+..+. .+++..++..+.. ++...-..++.||..+.++|+|.+|..+.+..+++-
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-----~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 108 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-----CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Confidence 356778888888877654 3566666655542 133456788889999999999999999988877754
No 259
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=87.83 E-value=21 Score=34.78 Aligned_cols=90 Identities=9% Similarity=-0.052 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH--------HHHHHH---hcchhhHHHHHHHH-
Q psy10738 260 SEHYKRTLVLAQDLG-DRAVEAQACYSLGNTYTLLRDYPTAIDYHLRH--------LIIAQQ---LMDRVGEGRACWSL- 326 (609)
Q Consensus 260 ~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a--------l~~~~~---~~~~~~~~~~~~~L- 326 (609)
..+.++++....+.+ .+......+..+|..|++.+++.+|..+|--. ..+.-+ ... ......+...
T Consensus 115 ~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~-~~e~dlfiaRa 193 (336)
T 3lpz_A 115 KRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDE-SHTAPLYCARA 193 (336)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSC-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcC-CccHHHHHHHH
Confidence 567788888887754 45566788889999999999999998887311 011111 111 1222333333
Q ss_pred HHHHHHcCChHHHHHHHHHHHHHH
Q psy10738 327 GNAHAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 327 a~~~~~~g~~~~A~~~~~~al~l~ 350 (609)
...|...|+...|...+....+..
T Consensus 194 VL~yL~l~n~~~A~~~~~~f~~~l 217 (336)
T 3lpz_A 194 VLPYLLVANVRAANTAYRIFTSAL 217 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHH
Confidence 335667778887777766665544
No 260
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=87.76 E-value=13 Score=32.21 Aligned_cols=122 Identities=16% Similarity=0.175 Sum_probs=84.4
Q ss_pred HHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q psy10738 30 ERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNT 109 (609)
Q Consensus 30 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~ 109 (609)
...++-.+|+.++-+-.-.....|+ .-..++..++..|+|..|+-.+.. .+.+.+.+.-+.|
T Consensus 10 ~Ks~kY~dYdt~~fLsa~L~~~~~e-------Y~lL~~I~LyyngEY~R~Lf~L~~-----------lNT~Ts~YYk~LC 71 (242)
T 3kae_A 10 CKSIRYRDYETAIFLAACLLPCKPE-------YRMLMSIVLYLNGEYTRALFHLHK-----------LNTCTSKYYESLC 71 (242)
T ss_dssp HHHHHTTCHHHHHHHHHHHC----C-------THHHHHHHHHHTTCHHHHHHHHHT-----------CCBHHHHHHHHHH
T ss_pred HHHhhcccccHHHHHHHHHccCChH-------HHhhhhhhhhhcchHhHHHHHHHh-----------cchHHHHHHHHHH
Confidence 3445667888776543333333332 235677888899999988765532 3345677788899
Q ss_pred HHHcCCHHHHHHHHHHHHH--HHH----------HcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHH
Q psy10738 110 LKVMGKYDEAMVCCKRHLE--ISR----------QLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQ 177 (609)
Q Consensus 110 ~~~~g~~~~A~~~~~~al~--l~~----------~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (609)
|....+|..|+.+++..++ +.+ -.-++...-..+..+|.+....|+ -+
T Consensus 72 y~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~--------------------r~ 131 (242)
T 3kae_A 72 YKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGY--------------------RE 131 (242)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTC--------------------HH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcC--------------------HH
Confidence 9999999999999998872 211 112333445677889999999999 99
Q ss_pred HHHHHHHHHHHH
Q psy10738 178 EAIKYYEQNLAL 189 (609)
Q Consensus 178 ~A~~~~~~al~~ 189 (609)
+|+.++......
T Consensus 132 EaI~y~~~Sf~~ 143 (242)
T 3kae_A 132 EGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhhhHhhhhcCC
Confidence 999999887654
No 261
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=87.49 E-value=5.6 Score=33.45 Aligned_cols=67 Identities=9% Similarity=-0.022 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q psy10738 279 EAQACYSLGNTYTLLRDYP---TAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g~~~---~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~ 350 (609)
...+.+++|+++....+.. +++..++..+.. .+...-..++.||..+.++|+|.+|..+.+..+++-
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~e 107 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 107 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 4667888888888877654 566666665542 223456688999999999999999999999888754
No 262
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=87.26 E-value=12 Score=37.54 Aligned_cols=73 Identities=12% Similarity=-0.109 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH-HHcCCCchH
Q psy10738 281 QACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEIS-KQLGDPLGQ 359 (609)
Q Consensus 281 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~-~~~~~~~~~ 359 (609)
.+...++..+...|++.+|+..+..++...+- .-.++..+..++...|+..+|+..|++..... +++|..+..
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~------~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~ 245 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFEHPY------REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 245 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 35566788889999999999999888765432 23378888899999999999999999988754 566765543
No 263
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=87.25 E-value=1.4 Score=46.03 Aligned_cols=81 Identities=15% Similarity=0.113 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHH
Q psy10738 61 AIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEG 140 (609)
Q Consensus 61 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~ 140 (609)
.++..||.+..+...+..|..+|.+|..+ .|..+..++.||.+....|+.-+|+-+|.+++.... ...
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~------Pf~ 220 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQL------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKF------PFP 220 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSB------CCH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHh------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCC------CCh
Confidence 46778999999999999999999999999 888889999999999999999999999999885432 233
Q ss_pred HHHHHHHHHHHHc
Q psy10738 141 RALYNLGNVYHAK 153 (609)
Q Consensus 141 ~~~~~lg~~~~~~ 153 (609)
.+..++..++...
T Consensus 221 ~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 221 AASTNLQKALSKA 233 (497)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 4556666666543
No 264
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=87.09 E-value=1.5 Score=45.91 Aligned_cols=61 Identities=20% Similarity=0.170 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy10738 241 RANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHL 307 (609)
Q Consensus 241 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 307 (609)
.++..||.+......+..|..+|.+|..+.|.. +..+..||.++...|+.-+|+-+|.+++
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~------G~~~nqLavla~~~~~~l~a~y~y~rsl 213 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN------GQPYNQLAILASSKGDHLTTIFYYCRSI 213 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB------SHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC------CchHHHHHHHHhcccccHHHHHHHHHHH
Confidence 344455555555555555555555555555553 4455555555555555555555555554
No 265
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.86 E-value=22 Score=35.74 Aligned_cols=131 Identities=9% Similarity=-0.093 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC-----------CcHHHHHHHHHHHH
Q psy10738 220 IYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLG-----------DRAVEAQACYSLGN 288 (609)
Q Consensus 220 ~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~la~ 288 (609)
+..|+..+.-....-++...+.. +..+.....+.++|.+++++......... .......+...++.
T Consensus 59 ~~ly~~fi~~f~~kin~L~lv~~---~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~ 135 (393)
T 4b4t_O 59 LRLYDNFVSKFYDKINQLSVVKY---LLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIAR 135 (393)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHT---THHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHH---HHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHH
Confidence 45555555555443333322211 23344566788899988877644332210 11223456667899
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcch--hhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHc
Q psy10738 289 TYTLLRDYPTAIDYHLRHLIIAQQLMDR--VGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQL 353 (609)
Q Consensus 289 ~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~ 353 (609)
.|...|+.++|..+++++-......++. ...+..|...+..|...+++..+..++-.++......
T Consensus 136 ~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~~~ 202 (393)
T 4b4t_O 136 TYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPS 202 (393)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999888877653 3566777788999999999999888888888776543
No 266
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=85.99 E-value=15 Score=42.87 Aligned_cols=103 Identities=11% Similarity=-0.024 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH-----------------HHHcCCcHHHHHHHHHHHHHHHHcccccccCCCC
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEI-----------------SRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQ 163 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----------------~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~ 163 (609)
...+.+|.++...|++++|..+|+++-.- .............|..+..++...|.
T Consensus 843 ~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~-------- 914 (1139)
T 4fhn_B 843 IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESA-------- 914 (1139)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSC--------
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCC--------
Confidence 34588999999999999999999876321 11111111234456777888888888
Q ss_pred CCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy10738 164 DPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQ 224 (609)
Q Consensus 164 ~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 224 (609)
++.++++.+.|++.... ++.......|.++=..+..+|+|++|...+.
T Consensus 915 ------------~~~vi~fa~lAi~~~~~-~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 915 ------------YIDALEFSLLADASKET-DDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp ------------CHHHHHHHHHHHHHCCS-CCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred ------------HHHHHHHHHHHHHhccC-CChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 89999999988875322 3333344578888888999999999976663
No 267
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=85.83 E-value=7.6 Score=33.61 Aligned_cols=97 Identities=20% Similarity=0.138 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIK 181 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~ 181 (609)
.-..++.+++..|.|..|+-.+.. . ..+.+.+.-+.||....+ |.+|+.
T Consensus 35 Y~lL~~I~LyyngEY~R~Lf~L~~-------l----NT~Ts~YYk~LCy~klKd--------------------YkkA~~ 83 (242)
T 3kae_A 35 YRMLMSIVLYLNGEYTRALFHLHK-------L----NTCTSKYYESLCYKKKKD--------------------YKKAIK 83 (242)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHT-------C----CBHHHHHHHHHHHHHTTC--------------------HHHHHH
T ss_pred HHhhhhhhhhhcchHhHHHHHHHh-------c----chHHHHHHHHHHHHHHHH--------------------HHHHHH
Confidence 345678888999999988776542 1 234566777889999999 999999
Q ss_pred HHHHHHHH--H----------HHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 182 YYEQNLAL--M----------KEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 182 ~~~~al~~--~----------~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 229 (609)
.++..+.- - .-.-++...-..+..+|.++...|+.++|+.++......
T Consensus 84 ~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 84 SLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 99988721 1 011223344567888999999999999999999887654
No 268
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=85.41 E-value=4.9 Score=45.49 Aligned_cols=104 Identities=6% Similarity=-0.204 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcH
Q psy10738 198 AQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRA 277 (609)
Q Consensus 198 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 277 (609)
.....|+.+-..|.+.|+.++|...+.+..+.......+. ..+|+.+-..|.+.|+.++|.+.|++.... +-.+
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd--vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~----G~~P 198 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT--LDMYNAVMLGWARQGAFKELVYVLFMVKDA----GLTP 198 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TCCC
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC--HhHHHHHHHHHHhCCCHHHHHHHHHHHHHc----CCCC
Confidence 3456788899999999999999999987655433221111 238889999999999999999999876432 2111
Q ss_pred HHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHH
Q psy10738 278 VEAQACYSLGNTYTLLRDY-PTAIDYHLRHLI 308 (609)
Q Consensus 278 ~~~~~~~~la~~~~~~g~~-~~A~~~~~~al~ 308 (609)
...+|..+-..+.+.|+. ++|.+.+++...
T Consensus 199 -DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 199 -DLLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp -CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 255677777788888885 788888877543
No 269
>3tvt_B PINS, partner of inscuteable; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster}
Probab=83.09 E-value=0.24 Score=31.17 Aligned_cols=24 Identities=67% Similarity=0.960 Sum_probs=20.6
Q ss_pred CcchhhhcccccccccccCCCccC
Q psy10738 403 RYNRVRRSSMEQLDLIKLTPENKG 426 (609)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~ 426 (609)
+--+++|++|+.+++++.||+++.
T Consensus 18 rmvrvrrqsmeqldlikitpdgkr 41 (50)
T 3tvt_B 18 RMVRVRRQDMEQLDLIKITPDGKR 41 (50)
T ss_pred eEEEeeecchhhcCeEEecCCchh
Confidence 456789999999999999999863
No 270
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.75 E-value=42 Score=33.65 Aligned_cols=129 Identities=8% Similarity=0.062 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC-----------ChHHHHHHHHHHHH
Q psy10738 180 IKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFG-----------DKAAERRANSNLGN 248 (609)
Q Consensus 180 ~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~la~ 248 (609)
+..|+..+.-+...-++...+.. +..+.....+.++|++++++......... .......+...++.
T Consensus 59 ~~ly~~fi~~f~~kin~L~lv~~---~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~ 135 (393)
T 4b4t_O 59 LRLYDNFVSKFYDKINQLSVVKY---LLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIAR 135 (393)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHT---THHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHH---HHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHH
Confidence 34555555444433333322222 23455567889999999987644332210 01223456678899
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q psy10738 249 SHIFLGEYQAASEHYKRTLVLAQDLGD--RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQ 311 (609)
Q Consensus 249 ~~~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 311 (609)
.|...|+.+.|..+++++-......++ +...+..|...+..|...+++..+..+.-.++....
T Consensus 136 ~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~ 200 (393)
T 4b4t_O 136 TYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLE 200 (393)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcc
Confidence 999999999999999999988887653 345677777788889999999988877777776554
No 271
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=81.51 E-value=75 Score=35.74 Aligned_cols=255 Identities=14% Similarity=0.034 Sum_probs=133.0
Q ss_pred HHHhcCChHHHHHHHHHHHHhCC---c---chhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHH
Q psy10738 31 RLCKAGDCRAGVAFFQAAIQAGT---D---DLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSG 104 (609)
Q Consensus 31 ~~~~~g~~~~A~~~~~~al~~~~---~---~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~ 104 (609)
-....|...+++.++...+.... + .......+-..||.+|.-.++ +++.+.+...+.- .+......+-.
T Consensus 420 Gli~ag~~~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~d----d~~~~~~~Aal 494 (963)
T 4ady_A 420 GLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYN----DSATSGEAAAL 494 (963)
T ss_dssp HHHTTTTTHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHT----CCHHHHHHHHH
T ss_pred HHhcCCCcHHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhc----CCHHHHHHHHH
Confidence 34455555678888888886543 1 122333455688888877766 4556665555542 11112235666
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYE 184 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 184 (609)
.+|.++.-.|+-+-....+..+. ...+......+-..||.+ ..|+ .+.+..
T Consensus 495 ALGli~vGTgn~~ai~~LL~~~~----e~~~e~vrR~aalgLGll--~~g~--------------------~e~~~~--- 545 (963)
T 4ady_A 495 GMGLCMLGTGKPEAIHDMFTYSQ----ETQHGNITRGLAVGLALI--NYGR--------------------QELADD--- 545 (963)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHH----HCSCHHHHHHHHHHHHHH--TTTC--------------------GGGGHH---
T ss_pred HHhhhhcccCCHHHHHHHHHHHh----ccCcHHHHHHHHHHHHhh--hCCC--------------------hHHHHH---
Confidence 78888888888655444444333 222222222233344444 4555 222222
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q psy10738 185 QNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYK 264 (609)
Q Consensus 185 ~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 264 (609)
.++......++.....+-..+|..|...|+...-...+..+ ....+......+...+|.+ ..|+.+.+..
T Consensus 546 -li~~L~~~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~----~~d~~d~VRraAViaLGlI--~~g~~e~v~r--- 615 (963)
T 4ady_A 546 -LITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVA----VSDSNDDVRRAAVIALGFV--LLRDYTTVPR--- 615 (963)
T ss_dssp -HHHHHHHCSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHH----HHCSCHHHHHHHHHHHHHH--TSSSCSSHHH---
T ss_pred -HHHHHHhCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHh----ccCCcHHHHHHHHHHHHhh--ccCCHHHHHH---
Confidence 23333444555555566678899999999954433344443 3333333333344444443 4455433322
Q ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCC
Q psy10738 265 RTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGN 335 (609)
Q Consensus 265 ~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~ 335 (609)
.+.......++.....+-..+|.+....++ .+|+..+.... .-.+..-...+...||.+.....+
T Consensus 616 -lv~~L~~~~d~~VR~gAalALGli~aGn~~-~~aid~L~~L~----~D~d~~Vrq~Ai~ALG~Ig~gtnn 680 (963)
T 4ady_A 616 -IVQLLSKSHNAHVRCGTAFALGIACAGKGL-QSAIDVLDPLT----KDPVDFVRQAAMIALSMILIQQTE 680 (963)
T ss_dssp -HTTTGGGCSCHHHHHHHHHHHHHHTSSSCC-HHHHHHHHHHH----TCSSHHHHHHHHHHHHHHSTTCCT
T ss_pred -HHHHHHhcCCHHHHHHHHHHHHHhccCCCc-HHHHHHHHHHc----cCCCHHHHHHHHHHHHHHhcCCcc
Confidence 233333445555556666677766644444 56776666543 112233333466666666555443
No 272
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=80.01 E-value=21 Score=34.83 Aligned_cols=91 Identities=10% Similarity=-0.004 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCC
Q psy10738 279 EAQACYSLGNTYTLLR--DYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDP 356 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 356 (609)
.+.++.+||.+-...- ....++..|.+|+..++..-... ...-|..+|-++.+.+++.+|+.++-+|-...+..+..
T Consensus 254 YPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~-HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~ 332 (472)
T 3re2_A 254 YPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDH-HIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYS 332 (472)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCC
T ss_pred CchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccC-CccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCC
Confidence 3455566666554322 22338889999998888753322 23356778889999999999999999999999998887
Q ss_pred chHHHHHHHHHHHH
Q psy10738 357 LGQVTAQMNVTDLR 370 (609)
Q Consensus 357 ~~~~~a~~~la~l~ 370 (609)
....+++..+-++-
T Consensus 333 reDeEIYKEf~eIA 346 (472)
T 3re2_A 333 KDDEEMYKEFHEIA 346 (472)
T ss_dssp GGGHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 77778777766654
No 273
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=79.01 E-value=17 Score=41.24 Aligned_cols=102 Identities=2% Similarity=-0.201 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhH
Q psy10738 240 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGE 319 (609)
Q Consensus 240 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 319 (609)
...|..+-..|.+.|+.++|...+.+........-.+ ...+|..|-..|.+.|+.++|.+.|.+.... +-.+ .
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P--dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~----G~~P-D 199 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL--TLDMYNAVMLGWARQGAFKELVYVLFMVKDA----GLTP-D 199 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TCCC-C
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC--CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHc----CCCC-c
Confidence 3478889999999999999999998765443221111 2568888999999999999999999987532 2222 2
Q ss_pred HHHHHHHHHHHHHcCCh-HHHHHHHHHHHH
Q psy10738 320 GRACWSLGNAHAARGNH-EKALYFATKHLE 348 (609)
Q Consensus 320 ~~~~~~La~~~~~~g~~-~~A~~~~~~al~ 348 (609)
..+|..+-.++.+.|+. ++|..++++..+
T Consensus 200 vvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 44677777788888985 688888877654
No 274
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=78.43 E-value=71 Score=34.15 Aligned_cols=128 Identities=5% Similarity=-0.104 Sum_probs=77.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Q psy10738 206 LGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYS 285 (609)
Q Consensus 206 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 285 (609)
++.......+.+.|...+....... .-+..........+|.-....+...++..++.++. ....+.. . .-..
T Consensus 220 ~~~~rlar~d~~~A~~~~~~~~~~~--~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~--~e~~ 291 (618)
T 1qsa_A 220 VAFASVARQDAENARLMIPSLAQAQ--QLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAI---MRSQSTS-L--IERR 291 (618)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHH---HTCCCHH-H--HHHH
T ss_pred HHHHHHHhcCHHHHHHHHHhhhhcc--CCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcc---ccCCChH-H--HHHH
Confidence 3444445557888888877654321 12333333344455555555564556666776543 2222221 1 2223
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q psy10738 286 LGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLE 348 (609)
Q Consensus 286 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~ 348 (609)
.+ .....|+++.|..++...-. ......+..+.+|.++..+|+.++|..+|+++..
T Consensus 292 ~r-~Alr~~d~~~a~~~~~~l~~------~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 292 VR-MALGTGDRRGLNTWLARLPM------EAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HH-HHHHHTCHHHHHHHHHHSCT------TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HH-HHHHCCCHHHHHHHHHHccc------cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 33 34567999999998865332 1123466788999999999999999999988754
No 275
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=77.04 E-value=22 Score=33.39 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=46.4
Q ss_pred HHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 30 ERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTL 89 (609)
Q Consensus 30 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 89 (609)
..+++.|+.++|++.....++..|.|.. ....+...+.-.|+++.|..-++.+.++
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~----~R~~LfqLLcv~G~w~RA~~QL~~~a~l 60 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDAS----LRSSFIELLCIDGDFERADEQLMQSIKL 60 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHH----HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHH----HHHHHHHHHHhcCCHHHHHHHHHHHHHh
Confidence 4567889999999999999999999855 4556677788889999999988877665
No 276
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=76.27 E-value=28 Score=34.57 Aligned_cols=90 Identities=11% Similarity=0.006 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCCc
Q psy10738 280 AQACYSLGNTYTLLRD--YPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDPL 357 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~--~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 357 (609)
..++.+||.+-...-- -..++..|.+|+..++..-... ...-|..+|-+|.+.+++.+|+.++-.|-...+..+...
T Consensus 277 PmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~-HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~r 355 (550)
T 3u84_A 277 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCR 355 (550)
T ss_dssp HHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCG
T ss_pred chhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccC-CccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCc
Confidence 4455555555443211 1247888999998887753322 233567788899999999999999999999999998888
Q ss_pred hHHHHHHHHHHHH
Q psy10738 358 GQVTAQMNVTDLR 370 (609)
Q Consensus 358 ~~~~a~~~la~l~ 370 (609)
...+++..+-++-
T Consensus 356 eDeEIYKEf~eIA 368 (550)
T 3u84_A 356 EDEEIYKEFFEVA 368 (550)
T ss_dssp GGHHHHHHHHHHH
T ss_pred chHHHHHHHHHHH
Confidence 8888877776654
No 277
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=75.68 E-value=13 Score=28.69 Aligned_cols=69 Identities=13% Similarity=-0.093 Sum_probs=48.4
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCC
Q psy10738 286 LGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDP 356 (609)
Q Consensus 286 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 356 (609)
.|..++..|+|=+|-+.++..-...+........+-+....|..+...||. |...+.+++.........
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~~ 75 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPCP 75 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCCc
Confidence 455667778888888888887765533222334455556667777788998 999999999988766543
No 278
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.47 E-value=16 Score=41.64 Aligned_cols=92 Identities=13% Similarity=0.014 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-----------------HHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHH
Q psy10738 282 ACYSLGNTYTLLRDYPTAIDYHLRHLII-----------------AQQLMDRVGEGRACWSLGNAHAARGNHEKALYFAT 344 (609)
Q Consensus 282 ~~~~la~~~~~~g~~~~A~~~~~~al~~-----------------~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~ 344 (609)
..+.+|.+|...|++++|..+|++|-.- .............|..+..++...|-++-++.+.+
T Consensus 842 ~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~ 921 (950)
T 4gq2_M 842 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 921 (950)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4478999999999999999999875411 11111122244578889999999999999999999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHcC
Q psy10738 345 KHLEISKQLGDPLGQVTAQMNVTDLRKALG 374 (609)
Q Consensus 345 ~al~l~~~~~~~~~~~~a~~~la~l~~~~g 374 (609)
.|++... ..++......+..+-....++|
T Consensus 922 lAI~~~~-~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 922 LADASKE-TDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp HHHHTCC-SCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhcc-cCCccchHHHHHHHHHHHhhCC
Confidence 9998763 2344444556666666666655
No 279
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=72.46 E-value=59 Score=29.82 Aligned_cols=187 Identities=16% Similarity=0.127 Sum_probs=97.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCChh--hHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY-LGDYQKAMQYHKQDLTLARNMEDKL--GEA 100 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~d~~--~~~ 100 (609)
+++..|...-+.++|++.+.+.+++.+.+++-.. .=.+.+..+|-. .|....+...+....+.-...++.. ...
T Consensus 10 ~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~---EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~i 86 (236)
T 3iqu_A 10 SLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSC---EERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEV 86 (236)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCH---HHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 4556688889999999999999999988763211 122344444432 2322333333322111110011111 111
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-----HHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHh
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEIS-----RQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVC 175 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-----~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (609)
.-|. ..+ -.+=...+...+.+. +...+....+..+-..|..|...... .. .++....
T Consensus 87 ~~yr--~ki------e~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~-------~~---g~~r~~~ 148 (236)
T 3iqu_A 87 REYR--EKV------ETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEV-------AT---GDDKKRI 148 (236)
T ss_dssp HHHH--HHH------HHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHH-------CC---STTHHHH
T ss_pred HHHH--HHH------HHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHh-------cC---chHHHHH
Confidence 1110 000 122334445555443 33334334444455667777665431 00 1133445
Q ss_pred HHHHHHHHHHHHHHHHH-h-CChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKE-I-NDTAAQGRACGNLGNTYY-LLGNFKQAIYYHQERLKIAR 231 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~ 231 (609)
-+.|...|++|..++.. + ..+|.......|.+..|+ .+++.++|....++|+.-+-
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai 207 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAM 207 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 67888999999998864 3 223444444445555555 57999999998888876543
No 280
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=72.25 E-value=20 Score=38.45 Aligned_cols=127 Identities=8% Similarity=-0.008 Sum_probs=81.0
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q psy10738 29 GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGN 108 (609)
Q Consensus 29 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~ 108 (609)
+.......+.+.|...+........-+......+...++......+...++..++.++.. ...+.. . .....+.
T Consensus 221 ~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~--~e~~~r~ 294 (618)
T 1qsa_A 221 AFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIM---RSQSTS-L--IERRVRM 294 (618)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHH---TCCCHH-H--HHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc---cCCChH-H--HHHHHHH
Confidence 444555568899999998876654444444455556666666666635566666665432 222222 2 2233343
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHH
Q psy10738 109 TLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLA 188 (609)
Q Consensus 109 ~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 188 (609)
....|++..|..++.+.-. .........+.+|..+...|+ .++|..+|.++..
T Consensus 295 -Alr~~d~~~a~~~~~~l~~------~~~~~~r~~YW~~ra~~~~g~--------------------~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 295 -ALGTGDRRGLNTWLARLPM------EAKEKDEWRYWQADLLLERGR--------------------EAEAKEILHQLMQ 347 (618)
T ss_dssp -HHHHTCHHHHHHHHHHSCT------TGGGSHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHT
T ss_pred -HHHCCCHHHHHHHHHHccc------cccccHhHHHHHHHHHHHcCC--------------------HHHHHHHHHHHhc
Confidence 3456999999998865332 122456788999999999999 8899998887653
No 281
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=72.22 E-value=23 Score=30.47 Aligned_cols=73 Identities=12% Similarity=0.127 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcc--hhHH--HHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDD--LRTL--SAIY-SQLGNAYFYLGDYQKAMQYHKQDLTLARNME 94 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~--a~~~-~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 94 (609)
.-.-+..|..++..|+|=+|-+.++.+....+.. .... +.+. ...|..+...|+..-|...+.+++.......
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~ 109 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVP 109 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSC
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 3445667999999999999999999999876543 3323 3333 4455566678999999999999999876543
No 282
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=71.92 E-value=29 Score=33.84 Aligned_cols=84 Identities=15% Similarity=0.087 Sum_probs=41.9
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy10738 189 LMKEINDTAAQGRACGNLGNTYYLLGN--FKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRT 266 (609)
Q Consensus 189 ~~~~~~~~~~~~~~~~~lg~~~~~~g~--~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 266 (609)
+.-+.+.-.....++.+||.+--..-- ...++..|.+++..++..-... ...-|..+|..+++.+++.+|+..+-.|
T Consensus 244 LLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~-HvYPYtylgGy~yR~~~~reAl~~WA~A 322 (472)
T 3re2_A 244 LLYDMGHIKTYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDH-HIYPYTYLGGYYYRKKKYYEAIASWVDA 322 (472)
T ss_dssp HHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHhccchhhCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccC-CccchhhhhhhhhhcchHHHHHHHHHHH
Confidence 333333333334455555554433211 1225666666666665532111 1124555666666667777766666666
Q ss_pred HHHHHHc
Q psy10738 267 LVLAQDL 273 (609)
Q Consensus 267 l~~~~~~ 273 (609)
-......
T Consensus 323 a~Vi~~Y 329 (472)
T 3re2_A 323 GYVAGKY 329 (472)
T ss_dssp HHHHTTS
T ss_pred HHHHHHc
Confidence 5555443
No 283
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=70.61 E-value=40 Score=33.54 Aligned_cols=91 Identities=11% Similarity=0.001 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCC
Q psy10738 279 EAQACYSLGNTYTLLR--DYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGDP 356 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 356 (609)
...++.+||.+-...- ....++..|.+|+..++..-.. ....-|..+|-.+.+.+++.+|+.++.++-......+..
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~-~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~ 339 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRD-EHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYC 339 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTT-CCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCC
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhccc-CcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccc
Confidence 3445555555544322 2234678999999988875332 223467778999999999999999999999999888766
Q ss_pred chHHHHHHHHHHHH
Q psy10738 357 LGQVTAQMNVTDLR 370 (609)
Q Consensus 357 ~~~~~a~~~la~l~ 370 (609)
......+..+.++.
T Consensus 340 reDeEiYke~~eIa 353 (489)
T 4gq4_A 340 REDEEIYKEFFEVA 353 (489)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHH
Confidence 66666666665544
No 284
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=68.92 E-value=16 Score=27.82 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 279 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
.+..+...+..+...|+|++||++++++.....+
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3455556667777777777777777776655443
No 285
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=67.20 E-value=38 Score=33.65 Aligned_cols=54 Identities=13% Similarity=0.100 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Q psy10738 219 AIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 219 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 273 (609)
++..|.+++..++..-... ...-|..+|-.+++.+++.+|+..+-.+-......
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~-HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~Y 351 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDY 351 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhccC-CccceeecchhhhhcchHHHHHHHHHHHHHHHHHc
Confidence 5566666666655532111 11245556666666666666666665555544443
No 286
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=65.89 E-value=15 Score=31.56 Aligned_cols=73 Identities=7% Similarity=-0.069 Sum_probs=51.6
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHh--cchhhHHHHH-HHHHHHHHHcCChHHHHHHHHHHHHHHHHcCCC
Q psy10738 284 YSLGNTYTLLRDYPTAIDYHLRHLIIAQQL--MDRVGEGRAC-WSLGNAHAARGNHEKALYFATKHLEISKQLGDP 356 (609)
Q Consensus 284 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~-~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 356 (609)
+.-|..++..|+|=+|-+.++..-.....- ......+.+. ...|..+...||..-|...+.+++.........
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~~ 111 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPND 111 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCc
Confidence 445666777799999988888776543222 1123344455 556777888999999999999999988766543
No 287
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=65.46 E-value=22 Score=27.45 Aligned_cols=67 Identities=13% Similarity=0.014 Sum_probs=48.9
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHhCCcchhH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Q psy10738 27 LEGERLCKAGDCRAGVAFFQAAIQAGTDDLRT--LSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMED 95 (609)
Q Consensus 27 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d 95 (609)
..|..++..|+|=+|-+.++.+-...+++... .+-+....|..+...|+. |...+.+++........
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~ 74 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPC 74 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCC
Confidence 45788899999999999999999887653332 333444445555567887 99999999987765543
No 288
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=64.32 E-value=20 Score=27.33 Aligned_cols=36 Identities=14% Similarity=0.016 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHc
Q psy10738 318 GEGRACWSLGNAHAARGNHEKALYFATKHLEISKQL 353 (609)
Q Consensus 318 ~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~ 353 (609)
..+-.+...++.+...|+|++|+.+.++|.....+.
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eA 48 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEA 48 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 345677788999999999999999999998766543
No 289
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=63.61 E-value=97 Score=29.04 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=45.0
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 70 YFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 70 ~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
.+..|..++|+......++. .|..+.....+...+...|+++.|...++.+.++.+
T Consensus 7 ll~~g~L~~al~~~~~~VR~------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p 62 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKA------SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFP 62 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHT------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCG
T ss_pred HHhCCCHHHHHHHHHHHHHh------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Confidence 45668888888888777776 777888888888888888999888888887777665
No 290
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=62.16 E-value=99 Score=28.56 Aligned_cols=190 Identities=13% Similarity=0.063 Sum_probs=97.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY-LGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
.++..|...-..++|++.+.+.+++...++.-.. .=.+.+..+|-. .|....+...+......-...++....
T Consensus 6 ~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~---EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~--- 79 (248)
T 3uzd_A 6 QLVQKARLAEQAERYDDMAAAMKNVTELNEPLSN---EERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKI--- 79 (248)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-H---
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCH---HHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHH---
Confidence 4555688889999999999999999987663211 112334444432 222233333322111110001111110
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHH-----HHcCCc--HHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHh
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEIS-----RQLNDK--LSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVC 175 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~-----~~~~d~--~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (609)
.+..-|... =-.+-...+...+.+. +...+. ...+..+-..|..|...-.. ...++....
T Consensus 80 --~~i~~yr~k-ie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~----------~~g~~r~~~ 146 (248)
T 3uzd_A 80 --EMVRAYREK-IEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEV----------ATGEKRATV 146 (248)
T ss_dssp --HHHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHH----------CCHHHHHHH
T ss_pred --HHHHHHHHH-HHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHh----------cCchHHHHH
Confidence 111111100 0122334444444443 333444 34444455667777665431 012234455
Q ss_pred HHHHHHHHHHHHHHHHH-h-CChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKE-I-NDTAAQGRACGNLGNTYY-LLGNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~ 232 (609)
-+.|...|++|..++.. + ..+|.......|.+..|+ .+++.++|....++|+.-+-.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~ 206 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIA 206 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 68889999999998864 3 223444444445555555 489999999988888775543
No 291
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=61.47 E-value=1.4e+02 Score=30.18 Aligned_cols=53 Identities=8% Similarity=-0.115 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHc-CCCchHHHHHHHHHHHHHHcCC
Q psy10738 323 CWSLGNAHAARGNHEKALYFATKHLEISKQL-GDPLGQVTAQMNVTDLRKALGM 375 (609)
Q Consensus 323 ~~~La~~~~~~g~~~~A~~~~~~al~l~~~~-~~~~~~~~a~~~la~l~~~~g~ 375 (609)
+...+..+.+-+.++.|+..++..+..++.. .+-.....++..++.+|...-.
T Consensus 95 ~~~~i~~f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~~I~~ 148 (436)
T 2yin_A 95 YETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMK 148 (436)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444555556666666666666666653 6666666666666666665543
No 292
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=61.09 E-value=88 Score=35.48 Aligned_cols=115 Identities=14% Similarity=-0.071 Sum_probs=72.7
Q ss_pred HHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----------------HH
Q psy10738 29 GERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTL-----------------AR 91 (609)
Q Consensus 29 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----------------~~ 91 (609)
...+...|.++-|.+ .+...|.++- .-+.+|.+|...|++++|..+|++|-.- ..
T Consensus 817 ~~~L~~~~~~~~a~e----L~~~~~~t~~----~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~ 888 (950)
T 4gq2_M 817 VEKLFLFKQYNACMQ----LIGWLNSDPI----AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAE 888 (950)
T ss_dssp HHHHHHTTCHHHHHH----HGGGCCSSHH----HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHH
T ss_pred HHHHHHhcHHHHHHH----HHhhcCCChH----HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccC
Confidence 345566676664433 3455565542 3478999999999999999999876421 11
Q ss_pred HcCChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Q psy10738 92 NMEDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHA 152 (609)
Q Consensus 92 ~~~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~ 152 (609)
...........|..+..++...+-++-++...+.|+.... ..+.......+..+=..+..
T Consensus 889 ~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~-~dd~~l~~~l~~r~f~~a~a 948 (950)
T 4gq2_M 889 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE-TDDEDLSIAITHETLKTACA 948 (950)
T ss_dssp HTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC-SCCHHHHHHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcc-cCCccchHHHHHHHHHHHhh
Confidence 1111222345677788888888999999999988887653 23444444455554444433
No 293
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=60.37 E-value=51 Score=32.86 Aligned_cols=73 Identities=16% Similarity=0.091 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 199 QGRACGNLGNTYYLLGN--FKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYKRTLVLAQD 272 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~--~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 272 (609)
...++.+||.+-...-. ...++..|++|+..++..-... ...-|..+|-.+.+.++|.+|+.++-++-.....
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~-hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~ 335 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQAWADTATVIQD 335 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccC-cccceeecchHHHHhhhHHHHHHHhhhhhhhhhh
Confidence 34455555554432211 1225556666666555422111 1124555566666666666666666555444433
No 294
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=59.67 E-value=1.1e+02 Score=28.41 Aligned_cols=190 Identities=12% Similarity=0.056 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhC---CcchhHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCChhh
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAG---TDDLRTLSAIYSQLGNAYFY-LGDYQKAMQYHKQDLTLARNMEDKLG 98 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~d~~~ 98 (609)
-.++..+....+.++|++.+.+.+++.+.+ ++-. ..=...+..+|-. .|....+...+......-...++..
T Consensus 29 e~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt---~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~- 104 (260)
T 2npm_A 29 ESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELT---VEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED- 104 (260)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCC---HHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH-
Confidence 345556888888999999999999999876 4211 1122344444433 1222233333222111100001111
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----HcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhH
Q psy10738 99 EAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISR-----QLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVK 173 (609)
Q Consensus 99 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~-----~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~ 173 (609)
...+..-|... =-.+-...+...+.+.. ...+....+..+-..|..|...... ...++..
T Consensus 105 ----~~~~i~~yr~k-ie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~----------~~g~~r~ 169 (260)
T 2npm_A 105 ----ASKMCGKYRSK-VEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEF----------STGDSKQ 169 (260)
T ss_dssp ----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHH----------CCHHHHH
T ss_pred ----HHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHh----------cCchHHH
Confidence 11111111111 11233445555555433 2333334444445567776665541 0112344
Q ss_pred HhHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Q psy10738 174 VCLQEAIKYYEQNLALMKEI-NDTAAQGRACGNLGNTYYL-LGNFKQAIYYHQERLKIAR 231 (609)
Q Consensus 174 ~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~ 231 (609)
...+.|...|++|..++..+ ..+|.......|.+..|+. +++.++|....++++.-+-
T Consensus 170 ~~~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai 229 (260)
T 2npm_A 170 SSAEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAI 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 55788999999999998222 2234444444555555554 8999999999888876543
No 295
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=58.97 E-value=29 Score=25.33 Aligned_cols=34 Identities=32% Similarity=0.362 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcc
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTDD 55 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~ 55 (609)
+.+....|+.+...|++++|+.+|-+|+...|.-
T Consensus 17 Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 17 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 4556667999999999999999999999998764
No 296
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=58.19 E-value=57 Score=33.36 Aligned_cols=31 Identities=19% Similarity=0.142 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 279 EAQACYSLGNTYTLLRDYPTAIDYHLRHLII 309 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 309 (609)
.+..++.+|.++...++|.+|.+++..|+..
T Consensus 219 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 219 QIEYRYLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eEeeeHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 3444455555555555555555555555554
No 297
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=57.61 E-value=1.2e+02 Score=28.15 Aligned_cols=190 Identities=12% Similarity=0.013 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCChhhHHH
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY-LGDYQKAMQYHKQDLTLARNMEDKLGEAK 101 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~d~~~~~~ 101 (609)
-+++..|...-+.++|++.+.+.+++.+.+++-.. .=.+.+..+|-. .|....+...+....+.-...++..
T Consensus 32 e~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~---EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~---- 104 (261)
T 3ubw_A 32 EDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTV---EERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED---- 104 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH----
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCH---HHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH----
Confidence 35566688888999999999999999987663211 112334444432 1222333333222111110111111
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-----HHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhH
Q psy10738 102 SSGNLGNTLKVMGKYDEAMVCCKRHLEIS-----RQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCL 176 (609)
Q Consensus 102 a~~~lg~~~~~~g~~~~A~~~~~~al~l~-----~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 176 (609)
...+..-|... =-.+-...+...+.+. +...+....+..+-..|..|...... ...++....-
T Consensus 105 -~~~~i~~yr~k-Ie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~----------~~g~~rk~~~ 172 (261)
T 3ubw_A 105 -KLKMIREYRQM-VETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEF----------ATGNDRKEAA 172 (261)
T ss_dssp -HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHH----------CCHHHHHHHH
T ss_pred -HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhh----------cCchHHHHHH
Confidence 11111111110 0122334455555543 33344334444444567777665431 0112344556
Q ss_pred HHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Q psy10738 177 QEAIKYYEQNLALMKEI--NDTAAQGRACGNLGNTYYL-LGNFKQAIYYHQERLKIAR 231 (609)
Q Consensus 177 ~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~ 231 (609)
+.|...|++|.+++... ..+|.......|.+..|+. +++.++|....++|+.-+-
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai 230 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 230 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 78899999999987543 2234444444555555554 7999999998888876553
No 298
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=55.28 E-value=1.3e+02 Score=27.61 Aligned_cols=190 Identities=12% Similarity=0.031 Sum_probs=98.9
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCChhhHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFY-LGDYQKAMQYHKQDLTLARNMEDKLGEAKS 102 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~d~~~~~~a 102 (609)
.++..|....+.++|++.+.+.+++.+.+++-. ..=...+..+|-. .|....+..........-...++..
T Consensus 7 ~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt---~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~----- 78 (234)
T 2br9_A 7 DLVYQAKLAEQAERYDEMVESMKKVAGMDVELT---VEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED----- 78 (234)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH-----
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCC---HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH-----
Confidence 344557778888999999999999998765311 1122334444432 1222223332222111100001111
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----HcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHH
Q psy10738 103 SGNLGNTLKVMGKYDEAMVCCKRHLEISR-----QLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQ 177 (609)
Q Consensus 103 ~~~lg~~~~~~g~~~~A~~~~~~al~l~~-----~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 177 (609)
...+..-|... =-.+=...+...+.+.. ...+....+..+-..|..|...... ...++.....+
T Consensus 79 ~~~~i~~yr~k-ie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~----------~~g~~r~~~~e 147 (234)
T 2br9_A 79 KLKMIREYRQM-VETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEF----------ATGNDRKEAAE 147 (234)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHH----------CCHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHH----------cCchHHHHHHH
Confidence 11111111111 11233345555555433 3333334444445667766665441 01123445577
Q ss_pred HHHHHHHHHHHHHHH-h-CChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Q psy10738 178 EAIKYYEQNLALMKE-I-NDTAAQGRACGNLGNTYYL-LGNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 178 ~A~~~~~~al~~~~~-~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~ 232 (609)
.|...|++|..++.. + +.+|.......|.+..|+. +++.++|....++++.-+-.
T Consensus 148 ~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~ 205 (234)
T 2br9_A 148 NSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 205 (234)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 899999999999864 3 3344444444555555554 89999999988888775544
No 299
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=53.79 E-value=61 Score=33.11 Aligned_cols=170 Identities=8% Similarity=-0.093 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHh-----C-----ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----HhCChHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKEI-----N-----DTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAR----EFGDKAAERR 241 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~~-----~-----~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~----~~~~~~~~~~ 241 (609)
.+++...+.++...+... . .........+++-.+|.++|+..-+...++..-.... ..-.....+.
T Consensus 142 le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~ 221 (455)
T 3t5v_B 142 LSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIE 221 (455)
T ss_dssp HHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEe
Confidence 677777777766654321 1 1222334455677899999999998888754332210 1122345677
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHHcCC----cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcch
Q psy10738 242 ANSNLGNSHIFLGEYQAASEHYKRTLVL-AQDLGD----RAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDR 316 (609)
Q Consensus 242 ~~~~la~~~~~~g~~~~A~~~~~~al~~-~~~~~~----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 316 (609)
.++.+|.++...++|.+|.+++..|+.. ++.... ....-.++..+--+-..+|++..-.- +++. ..
T Consensus 222 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n~~~ILkyLIpv~LLlG~~P~~~l-l~k~-------~~- 292 (455)
T 3t5v_B 222 YRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMVKWGP-LRPF-------LS- 292 (455)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHTTCCBCHHH-HGGG-------SC-
T ss_pred eeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhHHHHHHHHHHHHHHHcCCCCCHHH-Hccc-------ch-
Confidence 8899999999999999999999999998 764311 11223334444444555676543221 1110 00
Q ss_pred hhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHcCC
Q psy10738 317 VGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQLGD 355 (609)
Q Consensus 317 ~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~~~~ 355 (609)
......|..+..+ .+.||...-...+++.-..+.+-+-
T Consensus 293 ~~L~~~y~~L~~A-Vr~Gdl~~F~~~L~~~~~~f~~~gi 330 (455)
T 3t5v_B 293 QETIDNWSVLYKH-VRYGNIQGVSLWLRQNERHLCARQL 330 (455)
T ss_dssp HHHHHHHHHHHHH-HHHTCHHHHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHHHHH-HHhCCHHHHHHHHHHhHHHHHHcCC
Confidence 1122234444443 4567766655555555555544443
No 300
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=53.61 E-value=1.7e+02 Score=28.70 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKE 192 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 192 (609)
..+.+++|+|.+|...|... +. ...+....|..+|++|-.++.-
T Consensus 115 E~a~VLfNiaal~s~~a~~~------~r-----~~~~glK~A~~~fq~AAG~f~~ 158 (363)
T 3rau_A 115 EQACILYNLGALHSMLGAMD------KR-----VSEEGMKVSCTHFQCAAGAFAY 158 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHS------CC-----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh------cc-----CChHHHHHHHHHHHHHHHHHHH
Confidence 45678888998888877510 00 0112266777777777665543
No 301
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=52.83 E-value=21 Score=26.79 Aligned_cols=27 Identities=19% Similarity=0.402 Sum_probs=15.8
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQ 50 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~ 50 (609)
.++.+|...-..|+|++|+.+|..+++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 444455555666666666666666554
No 302
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=52.49 E-value=72 Score=24.00 Aligned_cols=34 Identities=9% Similarity=0.093 Sum_probs=28.7
Q ss_pred chhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q psy10738 18 GGNMCLELALEGERLCKAGDCRAGVAFFQAAIQA 51 (609)
Q Consensus 18 ~a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 51 (609)
.......++.+|...-..|+|++|+.+|..+++.
T Consensus 12 ~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 12 QSTAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3455677888899999999999999999999874
No 303
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=51.68 E-value=1.5e+02 Score=27.52 Aligned_cols=188 Identities=13% Similarity=0.032 Sum_probs=98.3
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHhC--CcchhHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHcCChhhHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQAG--TDDLRTLSAIYSQLGNAYFY-LGDYQKAMQYHKQDLTLARNMEDKLGEA 100 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~a~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~d~~~~~ 100 (609)
.++..+....+.++|++.+.+.+++.+.+ ++-. ..=...+..+|-. .|....+...+......-...++..
T Consensus 10 ~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt---~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~--- 83 (260)
T 1o9d_A 10 ENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELT---VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE--- 83 (260)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH---
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCC---HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH---
Confidence 44556788888999999999999999977 4211 1122333444322 1222333333322111100001111
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----HcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHh
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEISR-----QLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVC 175 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~-----~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (609)
...+..-|... --.+-...+...+.+.. ...+....+..+-..|..|.....+ ...++....
T Consensus 84 --~~~~i~~yr~k-ie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~----------~~g~~r~~~ 150 (260)
T 1o9d_A 84 --HVNSIREYRSK-IENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEF----------KTGAERKEA 150 (260)
T ss_dssp --HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHH----------CCSHHHHHH
T ss_pred --HHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHh----------cCchHHHHH
Confidence 11111112111 11233445555555433 3333334444445667777665541 011334455
Q ss_pred HHHHHHHHHHHHHHHHH-h-CChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKE-I-NDTAAQGRACGNLGNTYYL-LGNFKQAIYYHQERLKIA 230 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 230 (609)
.+.|...|++|..++.. + ..+|.......|.+..|+. +++.++|....++++.-+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 77899999999999864 3 3344444445555555554 799999998888876543
No 304
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=50.98 E-value=81 Score=24.11 Aligned_cols=38 Identities=11% Similarity=0.192 Sum_probs=30.0
Q ss_pred CCCcchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHh
Q psy10738 14 GGADGGNMCLELALEGERLCKAGDCRAGVAFFQAAIQA 51 (609)
Q Consensus 14 g~~~~a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 51 (609)
+..........++.+|...-..|+|++|+.+|..+++.
T Consensus 7 ~~~~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 7 GQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33444455667888899999999999999999999874
No 305
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=50.35 E-value=1.4e+02 Score=26.61 Aligned_cols=129 Identities=11% Similarity=-0.016 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHH-HHHhCChHHHHHHHHHHHHHHHHcCCH--HH-HH-HHHHHHHHHHHH---hCChHHHHHHHHHHH
Q psy10738 176 LQEAIKYYEQNLAL-MKEINDTAAQGRACGNLGNTYYLLGNF--KQ-AI-YYHQERLKIARE---FGDKAAERRANSNLG 247 (609)
Q Consensus 176 ~~~A~~~~~~al~~-~~~~~~~~~~~~~~~~lg~~~~~~g~~--~~-A~-~~~~~al~~~~~---~~~~~~~~~~~~~la 247 (609)
...-...|++.+.- ....+|+-....-|.....-.+-.|.. .. =. ..+++++..... ..+......+|...+
T Consensus 8 l~~~r~~fE~~l~~~l~~~dDPL~~w~~YIkW~ee~yP~g~~~~~s~L~~~lLErc~~~F~~~~rYkND~RYLklWl~Ya 87 (202)
T 3esl_A 8 LNQTKIAYEQRLLNDLEDMDDPLDLFLDYMIWISTSYIEVDSESGQEVLRSTMERCLIYIQDMETYRNDPRFLKIWIWYI 87 (202)
T ss_dssp HHHHHHHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCCCchHHHHHHHHHHHHhCCCCCCcchhchHHHHHHHHHHHhcccccccCCHHHHHHHHHHH
Confidence 45555666666554 223344433322222222222223332 11 23 567777776654 333444455666665
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 248 NSHIFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 309 (609)
Q Consensus 248 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 309 (609)
..+ ..+...++...|.-.... +-....+..|...|..+...|++.+|...|+.+++.
T Consensus 88 ~~~-~~~~~~~p~~if~~L~~~----~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~ 144 (202)
T 3esl_A 88 NLF-LSNNFHESENTFKYMFNK----GIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAEN 144 (202)
T ss_dssp HHH-STTCHHHHHHHHHHHHHH----TSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred Hhh-cccccCCHHHHHHHHHHC----CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 544 133356777776654332 222234778888899999999999999999988864
No 306
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=50.19 E-value=25 Score=26.42 Aligned_cols=27 Identities=19% Similarity=0.427 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQ 50 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~ 50 (609)
.++.+|...-..|+|++|+.+|..+++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 455555666666666666666666654
No 307
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=48.35 E-value=2.2e+02 Score=30.53 Aligned_cols=25 Identities=16% Similarity=0.085 Sum_probs=18.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 208 NTYYLLGNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 208 ~~~~~~g~~~~A~~~~~~al~~~~~ 232 (609)
.+|...|+|+.++..+.+++.-.-.
T Consensus 464 ~LY~La~~~d~vl~lln~~Ls~~l~ 488 (661)
T 2qx5_A 464 LLYQLAEEYDIVITLVNSLLSDTLS 488 (661)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhc
Confidence 3566678888888888888775543
No 308
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=47.81 E-value=2e+02 Score=27.84 Aligned_cols=97 Identities=13% Similarity=0.055 Sum_probs=50.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHH
Q psy10738 107 GNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQN 186 (609)
Q Consensus 107 g~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 186 (609)
+..+...|++..|.+...-.++...+.+-+... .....+..++..... + . ..=..+..++
T Consensus 62 A~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~-~~~~rL~~L~~~~~~-----------~-~-------p~r~~fi~~a 121 (336)
T 3lpz_A 62 SQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDG-ASRGKLLGCLRLFQP-----------G-E-------PVRKRFVKEM 121 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCH-HHHHHHHHHHTTSCT-----------T-C-------HHHHHHHHHH
T ss_pred HHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH-HHHHHHHHHHHhCCC-----------C-C-------cHHHHHHHHH
Confidence 444455566666666655555555544332221 233334444333322 0 0 1113355555
Q ss_pred HHHHHHhC-ChHHHHHHHHHHHHHHHHcCCHHHHHHHH
Q psy10738 187 LALMKEIN-DTAAQGRACGNLGNTYYLLGNFKQAIYYH 223 (609)
Q Consensus 187 l~~~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 223 (609)
++...+.+ .+......+..+|..|+..+++.+|..+|
T Consensus 122 i~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 122 IDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 55555443 23333457778888888888888877776
No 309
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=47.54 E-value=2.7e+02 Score=29.90 Aligned_cols=21 Identities=24% Similarity=0.150 Sum_probs=16.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHH
Q psy10738 106 LGNTLKVMGKYDEAMVCCKRH 126 (609)
Q Consensus 106 lg~~~~~~g~~~~A~~~~~~a 126 (609)
...++...|+|+.|+.++-+.
T Consensus 300 Yf~vLlLtgqFE~AI~~L~~~ 320 (661)
T 2qx5_A 300 YLQTLLLSGLYGLAIDYTYTF 320 (661)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhhHHHHHHHHHhc
Confidence 456677789999999987754
No 310
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=46.91 E-value=2.4e+02 Score=28.46 Aligned_cols=126 Identities=11% Similarity=-0.009 Sum_probs=71.5
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q psy10738 185 QNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQAASEHYK 264 (609)
Q Consensus 185 ~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 264 (609)
+.+..++..+.+......+..|+..+...|+|.+|--++.....+..-...... ... ...+.+.. ....
T Consensus 20 ~l~~~y~~~~~~el~i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~--~~~-------~~~~~~~~-qt~~- 88 (436)
T 2yin_A 20 NLLNFYKDNNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCA--SQV-------MQTGQQHP-QTHR- 88 (436)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC------------------------CHH-
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccC--ccc-------ccCCCCcc-ccHH-
Confidence 445555555666677778889999999999999998877433222111111000 000 00011110 0000
Q ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHc
Q psy10738 265 RTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQL-MDRVGEGRACWSLGNAHAAR 333 (609)
Q Consensus 265 ~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~La~~~~~~ 333 (609)
......+......+.+-+.|+.|+..++..+...... .+....+.++..++.+|...
T Consensus 89 ------------~~ke~L~~~~i~~f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~~I 146 (436)
T 2yin_A 89 ------------QLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESI 146 (436)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011234445556666677788888888877777764 77777777888888877765
No 311
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=46.30 E-value=1.7e+02 Score=29.56 Aligned_cols=33 Identities=9% Similarity=-0.034 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy10738 56 LRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLT 88 (609)
Q Consensus 56 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~ 88 (609)
++.....+..|+..+...|+|.+|-.++.++..
T Consensus 7 pdl~~~wl~~La~~h~~~~n~~EAa~cl~~~aa 39 (428)
T 2wm9_A 7 PELRKTWLDSMARIHVKNGDLSEAAMCYVHVTA 39 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 444455566777777777777777766654443
No 312
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=45.46 E-value=1.9e+02 Score=26.84 Aligned_cols=53 Identities=13% Similarity=-0.055 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHh---CChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q psy10738 217 KQAIYYHQERLKIAREF---GDKAAERRANSNLGNSHI-FLGEYQAASEHYKRTLVLA 270 (609)
Q Consensus 217 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 270 (609)
+.|...|++|.+++... .++...+ ...|.+..|. -+++.++|....++|.+-+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLG-LaLNfSVFyYEIln~p~~Ac~LAk~AFd~A 229 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLG-LALNFSVFYYEILNSPDRACRLAKAAFDDA 229 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHH-HHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 56788888888887652 2233333 3344444444 4688888888887776654
No 313
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=44.63 E-value=28 Score=26.90 Aligned_cols=33 Identities=33% Similarity=0.380 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCc
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGTD 54 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~ 54 (609)
++..+..|+.+...|+++.|+.+|-+|+.+.+.
T Consensus 20 Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 20 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 445566699999999999999999999998765
No 314
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=44.58 E-value=31 Score=25.51 Aligned_cols=30 Identities=27% Similarity=0.345 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 283 CYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 283 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
...+|+=|...|+|+.|+.||+.+++...+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 345677777888888888888877765544
No 315
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=44.57 E-value=99 Score=23.30 Aligned_cols=31 Identities=23% Similarity=0.432 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHhCC
Q psy10738 23 LELALEGERLCKAGDCRAGVAFFQAAIQAGT 53 (609)
Q Consensus 23 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~ 53 (609)
..++.+|..+++.++|.+|..+|+++.....
T Consensus 54 r~~i~eak~~y~~~ny~ea~~l~~k~~n~te 84 (106)
T 2vkj_A 54 RSLIAEGKDLFETANYGEALVFFEKALNLSD 84 (106)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHcccc
Confidence 3455568888888888888888888876543
No 316
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=44.09 E-value=2.3e+02 Score=28.58 Aligned_cols=31 Identities=6% Similarity=0.002 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy10738 199 QGRACGNLGNTYYLLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 199 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 229 (609)
....+..|+..+...|+|.+|--++..+..+
T Consensus 10 ~~~wl~~La~~h~~~~n~~EAa~cl~~~aal 40 (428)
T 2wm9_A 10 RKTWLDSMARIHVKNGDLSEAAMCYVHVTAL 40 (428)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3445556666666666666666665555444
No 317
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=43.65 E-value=1.9e+02 Score=26.38 Aligned_cols=73 Identities=19% Similarity=0.084 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHHHHHh-C--ChHHHHHHHHHHHHHH-HHhCCHHHHHHH
Q psy10738 197 AAQGRACGNLGNTYYLL-----GN-----FKQAIYYHQERLKIAREF-G--DKAAERRANSNLGNSH-IFLGEYQAASEH 262 (609)
Q Consensus 197 ~~~~~~~~~lg~~~~~~-----g~-----~~~A~~~~~~al~~~~~~-~--~~~~~~~~~~~la~~~-~~~g~~~~A~~~ 262 (609)
......+-..|..|..+ |+ -+.|...|++|.+++... . ++...+ ...|.+..| .-+++.++|...
T Consensus 120 eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLG-LaLNfSVFyyEiln~~~~Ac~l 198 (236)
T 3iqu_A 120 ESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLG-LALNFSVFHYEIANSPEEAISL 198 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHH-HHHHHHHHHHHTSSCHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHH-HHHHHHHHHHHHcCCHHHHHHH
Confidence 33344444556665542 33 357888899999888652 2 233333 333444444 456888888888
Q ss_pred HHHHHHHH
Q psy10738 263 YKRTLVLA 270 (609)
Q Consensus 263 ~~~al~~~ 270 (609)
.++|.+-+
T Consensus 199 Ak~Afd~A 206 (236)
T 3iqu_A 199 AKTTFDEA 206 (236)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776544
No 318
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=43.00 E-value=2.3e+02 Score=26.98 Aligned_cols=175 Identities=11% Similarity=0.021 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHccc
Q psy10738 80 MQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGK---YDEAMVCCKRHLEISRQ-LNDKLSEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 80 ~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~---~~~A~~~~~~al~l~~~-~~d~~~~~~~~~~lg~~~~~~g~ 155 (609)
.++..+.+...-....+....+.+..-|.+.-..|- -+-|.+++.+|+.++++ +.|......+...+...+.....
T Consensus 79 f~fv~~~i~~L~~~~~~elalrL~Lq~A~~ad~~~~~~~e~iaYEFf~qAf~iYEe~IsdSk~Q~~al~~ii~tL~~~~~ 158 (298)
T 2r17_C 79 FSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKC 158 (298)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHccC
Confidence 344444444432333334445555555666666665 67788999999999987 66777777777777666655443
Q ss_pred ccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHH
Q psy10738 156 AIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYL----------LGNFKQAIYYHQE 225 (609)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~----------~g~~~~A~~~~~~ 225 (609)
+. -+.-.....++-....++-..+...++.+.-+.+++. ..+-+..++++++
T Consensus 159 ------------f~------~enye~L~tk~t~~askLLKK~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqk 220 (298)
T 2r17_C 159 ------------FS------EENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKK 220 (298)
T ss_dssp ------------CC------HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHH
T ss_pred ------------CC------HhhHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHH
Confidence 11 1222222334444444555678888888888888874 2477899999999
Q ss_pred HHHHHHHhCChHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 226 RLKIAREFGDKAAERRANS---NLGNSHIFLGEYQAASEHYKRTLVLAQD 272 (609)
Q Consensus 226 al~~~~~~~~~~~~~~~~~---~la~~~~~~g~~~~A~~~~~~al~~~~~ 272 (609)
+++++...-+.......+. +.-..|+..|+..-..+++...+++..+
T Consensus 221 aLkiA~~~~d~~~~v~LfveILn~ylyff~~g~~~Vt~~~in~LI~lI~~ 270 (298)
T 2r17_C 221 ALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIRE 270 (298)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHTTTCTTSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHhhhhCCCCcccHHHHHHHHHHHHH
Confidence 9999988766544333332 2233344455544445555555555443
No 319
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=42.98 E-value=2e+02 Score=26.45 Aligned_cols=72 Identities=14% Similarity=-0.012 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHh-C--ChHHHHHHHHHHHHHHH-HhCCHHHHHHHH
Q psy10738 198 AQGRACGNLGNTYYLLGN----------FKQAIYYHQERLKIAREF-G--DKAAERRANSNLGNSHI-FLGEYQAASEHY 263 (609)
Q Consensus 198 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~~-~--~~~~~~~~~~~la~~~~-~~g~~~~A~~~~ 263 (609)
.....+-..|..|..+-. .+.|...|++|..++... . ++...+ ...|.+..|+ -+++.++|....
T Consensus 119 skVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPirLG-LaLNfSVFyYEIln~~~~Ac~lA 197 (248)
T 3uzd_A 119 SKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLG-LALNYSVFYYEIQNAPEQACHLA 197 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHH-HHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHH-HHHHHHHHHHHHcCCHHHHHHHH
Confidence 334444455665554322 256788888888887642 2 233333 3334444444 478888888887
Q ss_pred HHHHHHH
Q psy10738 264 KRTLVLA 270 (609)
Q Consensus 264 ~~al~~~ 270 (609)
++|+.-+
T Consensus 198 k~Afd~A 204 (248)
T 3uzd_A 198 KTAFDDA 204 (248)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776644
No 320
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=42.46 E-value=30 Score=25.59 Aligned_cols=30 Identities=33% Similarity=0.478 Sum_probs=23.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 203 CGNLGNTYYLLGNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 203 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 232 (609)
...+|.=|...|+|+.|+.||+.+++...+
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 445677788888999999999888776554
No 321
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=42.23 E-value=2.6e+02 Score=27.51 Aligned_cols=18 Identities=11% Similarity=-0.020 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHccc
Q psy10738 138 SEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~ 155 (609)
..+.+++++|.+|...+.
T Consensus 112 E~a~VLfNiaal~sq~A~ 129 (376)
T 3r9m_A 112 ELISMGFNVALWYTKYAS 129 (376)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456677888888777664
No 322
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=39.52 E-value=80 Score=28.19 Aligned_cols=60 Identities=18% Similarity=0.112 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHhCCHH
Q psy10738 197 AAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIAREFGDKAAERRANSNLGNSHIFLGEYQ 257 (609)
Q Consensus 197 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 257 (609)
...+..++.+|.++...++|.+|.+++.+|+..++... ......++..+--+-+.+|+..
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~-~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS-QKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH-HHHHHHHHHHHHHHHHHcCCCC
Confidence 44567888999999999999999999999999877543 2333345555555556677754
No 323
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=39.15 E-value=1.4e+02 Score=24.97 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=41.8
Q ss_pred HHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 30 ERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTL 89 (609)
Q Consensus 30 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 89 (609)
..+..+|.-++-.+.+...+...+-+ +.++..+|.+|...|+..+|.+.+.+|-+.
T Consensus 99 d~lv~~~KkDqLdki~~~~l~n~~~~----~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 99 DILVIQGKRDKLEEIGREILKNNEVS----ASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHHC--CCSC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhccHhHHHHHHHHHhccCCCC----hHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 45567788777777777765544434 448899999999999999999999888764
No 324
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=38.49 E-value=2.4e+02 Score=26.21 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHH-c---CChhhHHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Q psy10738 62 IYSQLGNAYFYLGD----------YQKAMQYHKQDLTLARN-M---EDKLGEAKSSGNLGNTLK-VMGKYDEAMVCCKRH 126 (609)
Q Consensus 62 ~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~---~d~~~~~~a~~~lg~~~~-~~g~~~~A~~~~~~a 126 (609)
.+-..|..|.++.+ .+.|...|+.|.+++.. + ..+|.......+.+..|+ .+++.++|....++|
T Consensus 144 Y~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~A 223 (268)
T 3efz_A 144 CIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRA 223 (268)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34445877776533 36788899999998863 3 233444444444554444 679999999999998
Q ss_pred HHH
Q psy10738 127 LEI 129 (609)
Q Consensus 127 l~l 129 (609)
.+-
T Consensus 224 Fde 226 (268)
T 3efz_A 224 IQA 226 (268)
T ss_dssp HHH
T ss_pred Hhh
Confidence 876
No 325
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=38.35 E-value=60 Score=24.29 Aligned_cols=27 Identities=19% Similarity=0.177 Sum_probs=20.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
..|.-.-..|+|++|+.+|.++++.+.
T Consensus 24 ~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 24 INAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 334455678999999999999998765
No 326
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=36.88 E-value=51 Score=24.65 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQ 50 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~ 50 (609)
+..++.+|...-..|+|++|+.+|..+++
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34455556666666777777776666665
No 327
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=36.57 E-value=3.2e+02 Score=26.87 Aligned_cols=35 Identities=11% Similarity=-0.019 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q psy10738 317 VGEGRACWSLGNAHAARGNHEKALYFATKHLEISK 351 (609)
Q Consensus 317 ~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~ 351 (609)
...+.+++..|..+...+++.+|+.+++.|.+..+
T Consensus 250 ~~~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~ 284 (376)
T 3r9m_A 250 FYTAYAYCYHGETLLASDKCGEAIRSLQEAEKLYA 284 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 34566777788888888888888888888877663
No 328
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=35.60 E-value=78 Score=23.82 Aligned_cols=31 Identities=16% Similarity=0.324 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
..+...|.-.-..|+|++|+.+|..+++.+-
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3344445555678999999999999998764
No 329
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=34.82 E-value=72 Score=23.78 Aligned_cols=25 Identities=20% Similarity=0.325 Sum_probs=19.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 107 GNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 107 g~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
|.-.-..|+|.+|+.+|..+++.+.
T Consensus 18 Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 18 AVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3444678999999999999998765
No 330
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=34.63 E-value=51 Score=26.56 Aligned_cols=27 Identities=30% Similarity=0.468 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHH
Q psy10738 24 ELALEGERLCKAGDCRAGVAFFQAAIQ 50 (609)
Q Consensus 24 ~l~~~g~~~~~~g~~~~A~~~~~~al~ 50 (609)
.++.+|...-..|+|++|+.+|..+++
T Consensus 20 ~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 20 DLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 344444444445555555555555544
No 331
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=34.51 E-value=2.5e+02 Score=24.96 Aligned_cols=84 Identities=10% Similarity=-0.069 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHc---CCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCChH
Q psy10738 261 EHYKRTLVLAQDL---GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNHE 337 (609)
Q Consensus 261 ~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~~ 337 (609)
..+++++..+... .+......+|...+..+ ..++..++...|.-.... +-....+..|...|..+...|++.
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~----~IG~~~AlfYe~wA~~lE~~g~~~ 132 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNK----GIGTKLSLFYEEFSKLLENAQFFL 132 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHH----TSSTTBHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHC----CCcHHHHHHHHHHHHHHHHcCCHH
Confidence 5677777766543 34455566676666654 234466777777654422 223345678899999999999999
Q ss_pred HHHHHHHHHHHH
Q psy10738 338 KALYFATKHLEI 349 (609)
Q Consensus 338 ~A~~~~~~al~l 349 (609)
+|...|+.+++-
T Consensus 133 ~A~~Vy~~GI~~ 144 (202)
T 3esl_A 133 EAKVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999873
No 332
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=34.20 E-value=1.6e+02 Score=26.14 Aligned_cols=38 Identities=8% Similarity=0.044 Sum_probs=21.6
Q ss_pred cchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCc
Q psy10738 17 DGGNMCLELALEGERLCKAGDCRAGVAFFQAAIQAGTD 54 (609)
Q Consensus 17 ~~a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~ 54 (609)
..+..+--.+..|..++..++|.+|.+.+..|+...|.
T Consensus 9 ~~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~ 46 (203)
T 3t5x_A 9 STAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHR 46 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCT
T ss_pred CHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCH
Confidence 33444444445566666666666666666666665543
No 333
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=31.88 E-value=2.3e+02 Score=27.98 Aligned_cols=18 Identities=11% Similarity=0.159 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHccc
Q psy10738 138 SEGRALYNLGNVYHAKGK 155 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~ 155 (609)
..+.+++|+|.+|...+.
T Consensus 140 E~a~VLfNlgal~s~~A~ 157 (380)
T 3c3r_A 140 EKSCVLFNCAALASQIAA 157 (380)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456788899999888776
No 334
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=30.78 E-value=2.7e+02 Score=25.10 Aligned_cols=81 Identities=11% Similarity=-0.082 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHc---CCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHcCCh
Q psy10738 260 SEHYKRTLVLAQDL---GDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLMDRVGEGRACWSLGNAHAARGNH 336 (609)
Q Consensus 260 ~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~La~~~~~~g~~ 336 (609)
...+++++..+... .+......+|..++.. . +.+...|.-.. ..+-....+..|...|.++...|++
T Consensus 97 ~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~---~---~~p~~if~~L~----~~~IG~~~AlfYe~wA~~lE~~g~~ 166 (223)
T 4aez_C 97 VTLLERCTREFVRNPLYKDDVRYLRIWMQYVNY---I---DEPVELFSFLA----HHHIGQESSIFYEEYANYFESRGLF 166 (223)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT---C---SCHHHHHHHHH----HTTCSTTBHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHc---c---CCHHHHHHHHH----HCCcchhHHHHHHHHHHHHHHcCCH
Confidence 45666666655433 3444455566655552 2 34444444322 2233344667888999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy10738 337 EKALYFATKHLEIS 350 (609)
Q Consensus 337 ~~A~~~~~~al~l~ 350 (609)
.+|...|+..++-.
T Consensus 167 ~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 167 QKADEVYQKGKRMK 180 (223)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999998743
No 335
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=30.21 E-value=3.6e+02 Score=25.56 Aligned_cols=173 Identities=10% Similarity=0.030 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHhCC
Q psy10738 180 IKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN---FKQAIYYHQERLKIARE-FGDKAAERRANSNLGNSHIFLGE 255 (609)
Q Consensus 180 ~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~ 255 (609)
..+..+.+...-....+....+.+..-|.+.-..|- -+-|.+++.+|+.++++ ..+......+...+...+.....
T Consensus 79 f~fv~~~i~~L~~~~~~elalrL~Lq~A~~ad~~~~~~~e~iaYEFf~qAf~iYEe~IsdSk~Q~~al~~ii~tL~~~~~ 158 (298)
T 2r17_C 79 FSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKC 158 (298)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHccC
Confidence 344444444443333444445566666666666666 67788999999999998 56776666677777666666554
Q ss_pred H--HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHHHHHhcchhhHHHHH
Q psy10738 256 Y--QAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTL----------LRDYPTAIDYHLRHLIIAQQLMDRVGEGRAC 323 (609)
Q Consensus 256 ~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 323 (609)
+ +.-.....++.....++-..+....+.+.-+.+++. ..+-+..+++++++++++...-+.......+
T Consensus 159 f~~enye~L~tk~t~~askLLKK~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqkaLkiA~~~~d~~~~v~Lf 238 (298)
T 2r17_C 159 FSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF 238 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHHHHHHHHHHhChhhHHHHH
Confidence 3 222223333333344444455567777777777764 2477899999999999999875544333333
Q ss_pred H---HHHHHHHHcCChHHHHHHHHHHHHHHHH
Q psy10738 324 W---SLGNAHAARGNHEKALYFATKHLEISKQ 352 (609)
Q Consensus 324 ~---~La~~~~~~g~~~~A~~~~~~al~l~~~ 352 (609)
. +....|...|+..-...+....+++.++
T Consensus 239 veILn~ylyff~~g~~~Vt~~~in~LI~lI~~ 270 (298)
T 2r17_C 239 IEILNRYIYFYEKENDAVTIQVLNQLIQKIRE 270 (298)
T ss_dssp HHHHHHHHHHHTTTCTTSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhCCCCcccHHHHHHHHHHHHH
Confidence 2 3344556667655555566666665544
No 336
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=29.89 E-value=1.1e+02 Score=22.69 Aligned_cols=27 Identities=19% Similarity=0.197 Sum_probs=20.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
..|.-.-..|+|++|+.+|..+++.+-
T Consensus 18 ~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 18 QKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 334444567999999999999988754
No 337
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=29.89 E-value=1.2e+02 Score=30.19 Aligned_cols=40 Identities=8% Similarity=0.191 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHH
Q psy10738 138 SEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMK 191 (609)
Q Consensus 138 ~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 191 (609)
..+.+++|+|.+|...|... +.. ....|..+|++|-.++.
T Consensus 121 E~a~vLfNlaal~s~~A~~~------~r~--------~lk~A~~~fq~AAG~f~ 160 (392)
T 1zb1_A 121 EKSCTLFNIAVIFTQIAREN------INE--------DYKNSIANLTKAFSCFE 160 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------TTS--------SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh------chH--------HHHHHHHHHHHHHHHHH
Confidence 45667888888887776511 111 25666677766655544
No 338
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=29.86 E-value=2.6e+02 Score=23.76 Aligned_cols=106 Identities=12% Similarity=0.090 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHH
Q psy10738 21 MCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEA 100 (609)
Q Consensus 21 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~ 100 (609)
.....+..+...|-..+|.+.+..++.. +|+..+ ...-+.||..|....++..-. +..+--.-.....+...
T Consensus 7 P~q~a~i~a~~afl~~dYs~VI~~L~~~---~~~~Lp--~~~kY~LA~SYI~~e~Ls~eQ---KenIln~itlkSde~yL 78 (161)
T 2ynq_A 7 PKQEAYIQSTELFLQNKYSDVITTLEDY---APEDMP--YVIQYELASSYVMTESLTEEQ---RQTVSNNITLKTDEQYM 78 (161)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHTTS---CGGGSC--HHHHHHHHHHHHHTSSSCHHH---HHHHHHTCCTTSCHHHH
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHhcC---ChhhCC--hhHHHHHHHHHHHccCCCHHH---HHHHHhhCCccCCHHHH
Confidence 3456677899999999999999887653 333322 336788999999887665322 11111111223334333
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Q psy10738 101 KSSGNLGNTLKVMGKYDEAMVCCKRHLEISRQLNDKLSEGRALYNL 146 (609)
Q Consensus 101 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~d~~~~~~~~~~l 146 (609)
. =++|.-.|++++|+. ++..++|+.....++...
T Consensus 79 ~-----YWIyiGRg~~~eAlD-------iA~~L~D~qLilyAl~K~ 112 (161)
T 2ynq_A 79 L-----YWIYIGRSQSEEALE-------LARTIEDRDLIVYALLKY 112 (161)
T ss_dssp H-----HHHHHHHTCHHHHHH-------HHHHHTCHHHHHHHHHHH
T ss_pred H-----HHHHHcCCchHHHHH-------HHHhcCcHHHHHHHHHHH
Confidence 3 345566899888765 566677766655555443
No 339
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=29.72 E-value=3.2e+02 Score=24.85 Aligned_cols=55 Identities=13% Similarity=-0.051 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q psy10738 217 KQAIYYHQERLKIAREF--GDKAAERRANSNLGNSHI-FLGEYQAASEHYKRTLVLAQ 271 (609)
Q Consensus 217 ~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 271 (609)
+.|...|++|.+++... +.++.......|.+..|. .+++.++|....++|+.-+-
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai 204 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 204 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 46778888888888642 222222233344444444 47888888888777766443
No 340
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=29.35 E-value=3.5e+02 Score=25.09 Aligned_cols=54 Identities=13% Similarity=-0.016 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHh--CChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q psy10738 217 KQAIYYHQERLKIAREF--GDKAAERRANSNLGNSHI-FLGEYQAASEHYKRTLVLA 270 (609)
Q Consensus 217 ~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 270 (609)
+.|...|++|..++... +.++.......|.+..|+ .+++.++|....++|+.-+
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 46788888888888642 222222233344444444 4688888888777766543
No 341
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=28.98 E-value=2.7e+02 Score=30.20 Aligned_cols=34 Identities=12% Similarity=-0.019 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 279 EAQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 279 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
.+.+++..|......+++-+|+.+++.|......
T Consensus 259 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 292 (704)
T 2xs1_A 259 QANAEYHQSILAKQQYYFGEEIARLQHAAELIKT 292 (704)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHH
Confidence 3445566666666677777777777777665543
No 342
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=27.62 E-value=1.3e+02 Score=22.97 Aligned_cols=27 Identities=19% Similarity=0.454 Sum_probs=20.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 105 NLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 105 ~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
..|.-.-..|+|++|+.+|..+++.+.
T Consensus 20 ~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 20 KRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 334444667999999999999988765
No 343
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=26.95 E-value=3.5e+02 Score=24.38 Aligned_cols=124 Identities=9% Similarity=-0.046 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCC-H-HHHHHHHHHHHHHHHH---hCChHHHHHHHHHHHHHH
Q psy10738 176 LQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGN-F-KQAIYYHQERLKIARE---FGDKAAERRANSNLGNSH 250 (609)
Q Consensus 176 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~-~-~~A~~~~~~al~~~~~---~~~~~~~~~~~~~la~~~ 250 (609)
.......|+..+.......|+-....-|.....-.+-.|. . ..=...+++++..... ..+......+|..++..
T Consensus 51 l~~~r~~fE~~i~~~~~~dDPL~~w~~YIkW~ee~yP~g~~~~s~L~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~- 129 (223)
T 4aez_C 51 LQKERMGHERKIETSESLDDPLQVWIDYIKWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYLRIWMQYVNY- 129 (223)
T ss_dssp HHHHHHHHHHHHHHGGGSSCTHHHHHHHHHHHHHHCTTCCCTTTCHHHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhCcCCCcchhhHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHc-
Confidence 5556666766665533344544333223222222222332 1 1134566666665543 33444444556555552
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy10738 251 IFLGEYQAASEHYKRTLVLAQDLGDRAVEAQACYSLGNTYTLLRDYPTAIDYHLRHLII 309 (609)
Q Consensus 251 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 309 (609)
.. .+...|.-. ...+-....+..|...|..+...|++.+|...|+.++..
T Consensus 130 --~~---~p~~if~~L----~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 130 --ID---EPVELFSFL----AHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRM 179 (223)
T ss_dssp --CS---CHHHHHHHH----HHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --cC---CHHHHHHHH----HHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 22 344444332 222333335778888999999999999999999998864
No 344
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=26.54 E-value=4.7e+02 Score=25.74 Aligned_cols=20 Identities=5% Similarity=0.026 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHHHHHcCC
Q psy10738 196 TAAQGRACGNLGNTYYLLGN 215 (609)
Q Consensus 196 ~~~~~~~~~~lg~~~~~~g~ 215 (609)
....+.+++|+|.+|...+.
T Consensus 119 ~fE~a~vLfNlaal~s~~A~ 138 (392)
T 1zb1_A 119 AFEKSCTLFNIAVIFTQIAR 138 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45678888888888888776
No 345
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=26.35 E-value=4.6e+02 Score=25.55 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Q psy10738 240 RRANSNLGNSHIFLGEYQAASEHYKRTLVLAQDL 273 (609)
Q Consensus 240 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 273 (609)
+.+++..|......+++-+|+.+++.|.....+.
T Consensus 252 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a 285 (363)
T 3rau_A 252 AVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEA 285 (363)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 3466666777777788888888888888777665
No 346
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=25.85 E-value=4.9e+02 Score=26.59 Aligned_cols=39 Identities=18% Similarity=0.079 Sum_probs=23.8
Q ss_pred hHhHHhHHHHHHHHHHHHHHHHHhC--ChHHHHHHHHHHHH
Q psy10738 170 EEVKVCLQEAIKYYEQNLALMKEIN--DTAAQGRACGNLGN 208 (609)
Q Consensus 170 ~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~ 208 (609)
+.+.+.-++|+++|++|++.+++.. +.+.....+.+++.
T Consensus 442 ~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak 482 (526)
T 2wb7_A 442 ENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAK 482 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhh
Confidence 4455556778888888888777764 33444444444443
No 347
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=24.58 E-value=2.7e+02 Score=22.21 Aligned_cols=26 Identities=8% Similarity=0.018 Sum_probs=19.1
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHH
Q psy10738 287 GNTYTLLRDYPTAIDYHLRHLIIAQQ 312 (609)
Q Consensus 287 a~~~~~~g~~~~A~~~~~~al~~~~~ 312 (609)
|.-.-..|+|++|+.+|..+++++..
T Consensus 25 Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 25 AAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 33445668899999999888876554
No 348
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=23.58 E-value=4.4e+02 Score=24.37 Aligned_cols=53 Identities=19% Similarity=0.182 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHH-hC-ChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q psy10738 217 KQAIYYHQERLKIARE-FG-DKAAERRANSNLGNSHI-FLGEYQAASEHYKRTLVLA 270 (609)
Q Consensus 217 ~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 270 (609)
+.|...|++|.+++ . .. .++.......|.+..|+ .+++.++|....++|..-+
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 228 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMA 228 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 46788899998888 4 21 12222233344444444 4788888888888777654
No 349
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=23.30 E-value=2.2e+02 Score=22.25 Aligned_cols=65 Identities=12% Similarity=-0.009 Sum_probs=38.4
Q ss_pred hhhhHhhhcCCCcchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHhCCHHHHHHHH
Q psy10738 5 NISSSDSQSGGADGGNMCLELALEGERLCKAGDCRAGVAFFQAAIQAGTDDLRTLSAIYSQLGNAYFYLGDYQKAMQYH 83 (609)
Q Consensus 5 ~Lg~~~~~~g~~~~a~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~ 83 (609)
.|++.+...++ ++.. . ..+...+...|+|++|..+.+..- .|+ +--.++.+-.+.|-.+++...+
T Consensus 28 tIAdwL~~~~~-~E~v---~-lIR~sSLmNrG~Yq~Al~l~~~~c-----~pd----lepw~ALce~rlGl~s~le~rL 92 (116)
T 2p58_C 28 CIAEWLHLKGE-EEAV---Q-LIRLSSLMNRGDYASALQQGNKLA-----YPD----LEPWLALCEYRLGLGSALESRL 92 (116)
T ss_dssp HHHHHHHHTTC-HHHH---H-HHHHHHHHHTTCHHHHHHHHTTSC-----CGG----GHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHhCCc-HHHH---H-HHHHHHHHcchhHHHHHHhcCCCC-----Cch----HHHHHHHHHHhcccHHHHHHHH
Confidence 45666666666 3333 2 234567788888888877655432 222 3345566777777777666554
No 350
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=23.12 E-value=1.4e+02 Score=22.58 Aligned_cols=46 Identities=20% Similarity=0.327 Sum_probs=0.0
Q ss_pred chHhHHhHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy10738 169 PEEVKVCLQEAIKYYEQNLALMKEINDTAAQGRACGNLGNTYYLLGNFKQAIYYHQERLKIARE 232 (609)
Q Consensus 169 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 232 (609)
+...+..|++|..+..++|.+-+.... |+-++|+.+|++.+.-...
T Consensus 6 ~~~ik~~h~~AF~~Is~aL~~DE~~~~------------------G~k~~A~~~YkkGi~eL~~ 51 (89)
T 3eab_A 6 AERVRVFHKQAFEYISIALRIDEDEKA------------------GQKEQAVEWYKKGIEELEK 51 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCS------------------SSGGGSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccC------------------CCHHHHHHHHHHHHHHHHh
No 351
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=22.81 E-value=3.4e+02 Score=26.71 Aligned_cols=35 Identities=11% Similarity=0.050 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhc
Q psy10738 280 AQACYSLGNTYTLLRDYPTAIDYHLRHLIIAQQLM 314 (609)
Q Consensus 280 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 314 (609)
+.+++..|......+++-+|+.+++.|.....+..
T Consensus 275 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~ 309 (380)
T 3c3r_A 275 ANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVA 309 (380)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 55666667777777888888888887777777654
No 352
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=22.62 E-value=2.9e+02 Score=23.59 Aligned_cols=77 Identities=10% Similarity=0.113 Sum_probs=50.1
Q ss_pred HHHHHHHHHhCC------cchhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHcCC
Q psy10738 42 VAFFQAAIQAGT------DDLRTLSAIYSQLGNAYFYLGDYQKAMQYHKQDLTLARNMEDKLGEAKSSGNLGNTLKVMGK 115 (609)
Q Consensus 42 ~~~~~~al~~~~------~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~d~~~~~~a~~~lg~~~~~~g~ 115 (609)
..++++++..-. +|+. ...+|...+... ++ +...|..... .+-....+..|...|..+...|+
T Consensus 43 ~~lLErc~~~f~~~~~YknD~R-yLklWl~ya~~~---~~---p~~if~~L~~----~~IG~~~AlfY~~wA~~lE~~~~ 111 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPR-FLNLWLKLGRLC---NE---PLDMYSYLHN----QGIGVSLAQFYISWAEEYEAREN 111 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHH-HHHHHHHHHHHC---SC---HHHHHHHHHH----TTSSTTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhhhhhhccCHH-HHHHHHHHHHhc---CC---HHHHHHHHHH----CCcchhhHHHHHHHHHHHHHcCC
Confidence 557777776532 3433 344555555442 33 4444444332 23345567888899999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy10738 116 YDEAMVCCKRHLEI 129 (609)
Q Consensus 116 ~~~A~~~~~~al~l 129 (609)
+.+|...|+.+++.
T Consensus 112 ~~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 112 FRKADAIFQEGIQQ 125 (164)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999998874
No 353
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=22.31 E-value=79 Score=23.01 Aligned_cols=27 Identities=26% Similarity=0.381 Sum_probs=21.4
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHH
Q psy10738 324 WSLGNAHAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 324 ~~La~~~~~~g~~~~A~~~~~~al~l~ 350 (609)
..+|+.+...|++++|..++-+|+.++
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 457778888888888888888888765
No 354
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=22.02 E-value=1.1e+02 Score=23.62 Aligned_cols=27 Identities=26% Similarity=0.381 Sum_probs=20.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHH
Q psy10738 324 WSLGNAHAARGNHEKALYFATKHLEIS 350 (609)
Q Consensus 324 ~~La~~~~~~g~~~~A~~~~~~al~l~ 350 (609)
..+|..+...|+++.|+.+|-+|+.++
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 356777777788888888777777776
No 355
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.29 E-value=2.5e+02 Score=22.45 Aligned_cols=44 Identities=9% Similarity=0.018 Sum_probs=0.0
Q ss_pred HHHHhcchhhHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q psy10738 309 IAQQLMDRVGEGRACWSLGNAHAARGNHEKALYFATKHLEISKQ 352 (609)
Q Consensus 309 ~~~~~~~~~~~~~~~~~La~~~~~~g~~~~A~~~~~~al~l~~~ 352 (609)
....+......+..+.+.|.-.-..|+.+.|+.+|++.+....+
T Consensus 11 ~l~~ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~ 54 (116)
T 2dl1_A 11 EIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLR 54 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHH
No 356
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=20.22 E-value=5.8e+02 Score=24.45 Aligned_cols=110 Identities=15% Similarity=0.035 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHhCC----cchhHHHHHH--HHHHHHHHHhCCHHHHHH-----HHHHHHHHH
Q psy10738 22 CLELALEGERLCKAGDCRAGVAFFQAAIQAGT----DDLRTLSAIY--SQLGNAYFYLGDYQKAMQ-----YHKQDLTLA 90 (609)
Q Consensus 22 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~----~~~~~~a~~~--~~lg~~~~~~g~~~~A~~-----~~~~al~~~ 90 (609)
....+..|..+...|++.+|+..|+.+|..-+ ++......+. ..++.-|..-=..+.+.. -..+.++++
T Consensus 114 L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELA 193 (325)
T 3mv2_A 114 VNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELA 193 (325)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 34566779999999999999999999987532 2222222221 112211211000011000 112333332
Q ss_pred HHc----CChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy10738 91 RNM----EDKLGEAKSSGNLGNTLKVMGKYDEAMVCCKRHLEISR 131 (609)
Q Consensus 91 ~~~----~d~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 131 (609)
--. -.+.....++..--...++.++|..|..+.++.+++.+
T Consensus 194 AYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p 238 (325)
T 3mv2_A 194 AYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIIS 238 (325)
T ss_dssp HHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 211 01233344455555667788899999888888877654
No 357
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=20.10 E-value=5.3e+02 Score=23.95 Aligned_cols=100 Identities=17% Similarity=0.256 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHc-----CCcHHHHHHHHHHHHHHHHcccccccCCCCCCCCCchHhHHhHHHHHHHHHHHHHHHHH-
Q psy10738 119 AMVCCKRHLEISRQL-----NDKLSEGRALYNLGNVYHAKGKAIGKVGQQDPGEYPEEVKVCLQEAIKYYEQNLALMKE- 192 (609)
Q Consensus 119 A~~~~~~al~l~~~~-----~d~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~- 192 (609)
-...+...+.+.... .+. ..+..+-..|..|...... ...++....-+.|...|++|.+++..
T Consensus 117 L~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~----------~~g~erk~~~e~a~~aYq~A~eiA~~~ 185 (268)
T 3efz_A 117 ILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEI----------LKDEEKNQCIKQAVEFYEDALQRERSF 185 (268)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTT----------CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhh----------cCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445566666655442 222 3333344567777766541 11234455578899999999998854
Q ss_pred h---CChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH
Q psy10738 193 I---NDTAAQGRACGNLGNTYY-LLGNFKQAIYYHQERLKI 229 (609)
Q Consensus 193 ~---~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~ 229 (609)
+ ..+|.......|.+..|+ .+++.++|....++|+.-
T Consensus 186 L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 186 LEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp CTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3 233444444455555555 589999999999998776
Done!