BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10742
(207 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328720305|ref|XP_001943131.2| PREDICTED: patched domain-containing protein 3-like [Acyrthosiphon
pisum]
Length = 1024
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 82/93 (88%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG++C+D L + F++LG+ +A+HPGYF++VP+ LT ICITGFQR+ FE+DPEYLFSP+
Sbjct: 3 CGIECIDKWLTKAFYRLGLVVAKHPGYFLLVPVFLTAICITGFQRVKFEIDPEYLFSPEQ 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GPGKTERAIVE YFKMNYS+ FNPTRITRPGR+
Sbjct: 63 GPGKTERAIVESYFKMNYSSLFNPTRITRPGRF 95
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML+ EIWKELR++D+I+ N SI +G ++ Y+YDDICA+W+D CFPNDILNLDYV+ +V
Sbjct: 108 MLSVEIWKELRILDDIIRNASITWGPENTAYKYDDICARWIDQCFPNDILNLDYVMNDVV 167
Query: 61 TKALNLTFPIRFT 73
+L LTFPI F
Sbjct: 168 NGSLKLTFPIMFN 180
>gi|158289940|ref|XP_311553.4| AGAP010394-PA [Anopheles gambiae str. PEST]
gi|157018400|gb|EAA07199.5| AGAP010394-PA [Anopheles gambiae str. PEST]
Length = 981
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 79/93 (84%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVDN L + FFKLG+FI RHPGYF+IVP+LL ++C+TGFQ+I +E+DPEYLFSP
Sbjct: 3 CGISCVDNALNKSFFKLGLFIGRHPGYFLIVPVLLALLCMTGFQQIKYEIDPEYLFSPVR 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GK+ERAIVE YFK+NY+ RFN RITRPGR+
Sbjct: 63 GEGKSERAIVESYFKVNYTHRFNVGRITRPGRF 95
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L E+W+ELRL+D I+ N ++ + D + + Y + CA+W + CF NDILNLD +I+EVE
Sbjct: 110 LLRSEVWQELRLLDGIIQNATVQY--DGESFTYREACARWENECFTNDILNLDKIIDEVE 167
Query: 61 TKALNLTFPIRFT 73
LNLTFP+ F
Sbjct: 168 AGDLNLTFPVMFN 180
>gi|157117285|ref|XP_001653012.1| hypothetical protein AaeL_AAEL001299 [Aedes aegypti]
gi|108883354|gb|EAT47579.1| AAEL001299-PA [Aedes aegypti]
Length = 1160
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 79/94 (84%)
Query: 111 GCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQ 170
CG+ CVDN L R F+KLG+FI RHPGYF+IVP+LL ++C+TG+Q+I +E+DPEYLFSP
Sbjct: 6 ACGISCVDNALNRTFYKLGIFIGRHPGYFLIVPVLLALLCMTGYQQIRYEIDPEYLFSPI 65
Query: 171 HGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GK+ERAIVE YFK+NY+ RFN RITRPGR+
Sbjct: 66 RGEGKSERAIVENYFKVNYTHRFNVGRITRPGRF 99
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L E+W+ELRL+D I+ N ++ + D + Y + CA+W CF NDILNLD +I EVE
Sbjct: 113 LLRTEVWEELRLLDGIIQNATVHY--DGDTFTYKETCARWEGECFTNDILNLDQIIGEVE 170
Query: 61 TKALNLTFPIRFT 73
LNLTFP+ F
Sbjct: 171 AGDLNLTFPVMFN 183
>gi|195174808|ref|XP_002028162.1| GL16254 [Drosophila persimilis]
gi|194116632|gb|EDW38675.1| GL16254 [Drosophila persimilis]
Length = 1218
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
Query: 100 LSFPCPQISMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF 159
++ C Q MA CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++C+TG+Q++ +
Sbjct: 23 MAHTCAQKQMA-CGISCVDKTLNKSFYHLGLKIAKHPGYFIIIPVLLTLLCMTGYQQLKY 81
Query: 160 EMDPEYLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
++DPEYLFSP G GKTERA+VEQYFK+NY+ RFN RITRPGR+
Sbjct: 82 QIDPEYLFSPIAGEGKTERAVVEQYFKVNYTHRFNVGRITRPGRF 126
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D ++ N + + D Y Y D CA+W + CF NDILNLD +++++E
Sbjct: 140 MIRREVFQELRTLDNLIQNATSTY--DGDTYTYKDNCARWENECFENDILNLDALMDDLE 197
Query: 61 TKALNLTFPIRFTFSP 76
T LNLTFP F F+P
Sbjct: 198 TGQLNLTFP--FMFNP 211
>gi|194864110|ref|XP_001970775.1| GG10828 [Drosophila erecta]
gi|190662642|gb|EDV59834.1| GG10828 [Drosophila erecta]
Length = 1169
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 80/93 (86%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LGV IA+HPGYFII+P+LLT++C+TG+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDKTLNKSFYHLGVCIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GKTERAIVEQYFK+NY+ RFN RITRPGR+
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPGRF 95
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D I+ N + + D Y+ D CA+W + CF NDILNLD +++++E
Sbjct: 109 MIRREVFQELRQLDNIIQNATTTYDGDTYTYK--DNCARWENECFENDILNLDALMDDIE 166
Query: 61 TKALNLTFPIRFTFSP 76
LNLTFP F F+P
Sbjct: 167 AGQLNLTFP--FMFNP 180
>gi|195475620|ref|XP_002090082.1| GE19423 [Drosophila yakuba]
gi|194176183|gb|EDW89794.1| GE19423 [Drosophila yakuba]
Length = 1169
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 80/93 (86%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++C+TG+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDKTLNKSFYHLGISIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GKTERAIVEQYFK+NY+ RFN RITRPGR+
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPGRF 95
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D I+ N + + D Y+ D CA+W + CF NDILNLD +++++E
Sbjct: 109 MIRREVFQELRQLDNIIQNATTTYDGDTYTYK--DNCARWENECFENDILNLDALMDDIE 166
Query: 61 TKALNLTFPIRFTFSP 76
LNLTFP F F+P
Sbjct: 167 AGQLNLTFP--FMFNP 180
>gi|45550365|ref|NP_610209.2| Patched-related, isoform A [Drosophila melanogaster]
gi|386767136|ref|NP_001246145.1| Patched-related, isoform B [Drosophila melanogaster]
gi|386767138|ref|NP_001246146.1| Patched-related, isoform C [Drosophila melanogaster]
gi|28316966|gb|AAO39504.1| RE45036p [Drosophila melanogaster]
gi|45445413|gb|AAF57274.2| Patched-related, isoform A [Drosophila melanogaster]
gi|383302268|gb|AFH07900.1| Patched-related, isoform B [Drosophila melanogaster]
gi|383302269|gb|AFH07901.1| Patched-related, isoform C [Drosophila melanogaster]
Length = 1169
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 80/93 (86%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++C+TG+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDKTLNKSFYHLGICIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GKTERAIVEQYFK+NY+ RFN RITRPGR+
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPGRF 95
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D I+ N + + D Y+ D CA+W + CF NDILNLD +++++E
Sbjct: 109 MIRREVFQELRQLDNIIQNATTTYDGDTYTYK--DNCARWENECFENDILNLDALMDDIE 166
Query: 61 TKALNLTFPIRFTFSP 76
LNLTFP F F+P
Sbjct: 167 AGQLNLTFP--FMFNP 180
>gi|194758170|ref|XP_001961335.1| GF13815 [Drosophila ananassae]
gi|190622633|gb|EDV38157.1| GF13815 [Drosophila ananassae]
Length = 1167
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 80/93 (86%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++C+TG+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDRTLNKSFYHLGICIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GKTERAIVEQYFK+NY+ RFN RITRPGR+
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPGRF 95
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D ++ N S + D Y Y D CA+W + CF NDILNLD +++++E
Sbjct: 109 MIRREVFQELRQLDNLIQNASTTY--DGDTYTYKDNCARWENECFENDILNLDALMDDIE 166
Query: 61 TKALNLTFPIRFTFSP 76
LNLTFP F F+P
Sbjct: 167 AGQLNLTFP--FMFNP 180
>gi|198461242|ref|XP_002138974.1| GA24099 [Drosophila pseudoobscura pseudoobscura]
gi|198137280|gb|EDY69532.1| GA24099 [Drosophila pseudoobscura pseudoobscura]
Length = 1194
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 81/96 (84%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFS 168
+ CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++C+TG+Q++ +++DPEYLFS
Sbjct: 7 LMACGISCVDKTLNKSFYHLGLKIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFS 66
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P G GKTERA+VEQYFK+NY+ RFN RITRPGR+
Sbjct: 67 PIAGEGKTERAVVEQYFKVNYTHRFNVGRITRPGRF 102
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D ++ N + + D Y Y D CA+W + CF NDILNLD +++++E
Sbjct: 116 MIRREVFQELRTLDNLIQNATSTY--DGDTYTYKDNCARWENECFENDILNLDALMDDLE 173
Query: 61 TKALNLTFPIRFTFSP 76
T LNLTFP F F+P
Sbjct: 174 TGQLNLTFP--FMFNP 187
>gi|332022011|gb|EGI62337.1| Patched domain-containing protein 3 [Acromyrmex echinatior]
Length = 1069
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 77/91 (84%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
L CVD+ L R F+K+G+ + RHPGYF+IVPILL IC TG+QRI +E+DPEYLFSP +GP
Sbjct: 4 LTCVDDFLNRAFYKVGLHVGRHPGYFVIVPILLACICFTGYQRIHYEIDPEYLFSPVNGP 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GKTERAIVEQYFK+NYS +FN RITRPGR+
Sbjct: 64 GKTERAIVEQYFKVNYSHQFNLGRITRPGRF 94
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML IW+ELR +D +V N + + +D+ + YD ICA+W+D CF NDILNL ++I+EVE
Sbjct: 108 MLKSAIWQELRELDWLVRNVTAKY--EDEEFMYDQICARWLDQCFTNDILNLHHIIKEVE 165
Query: 61 TKALNLTFPIRFT 73
+ LNLTFP+ F
Sbjct: 166 RRELNLTFPVMFN 178
>gi|195431104|ref|XP_002063588.1| GK21989 [Drosophila willistoni]
gi|194159673|gb|EDW74574.1| GK21989 [Drosophila willistoni]
Length = 1184
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
Query: 105 PQISMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPE 164
Q+ M CG+ CVD TL + F+ LG+ IA+HPGYF+I+P+LLT++C+TG+Q++ +++DPE
Sbjct: 2 SQLKMT-CGISCVDKTLNKSFYHLGICIAKHPGYFVIIPVLLTLLCMTGYQQLKYQIDPE 60
Query: 165 YLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
YLFSP +G GK ERA+VEQYFK+NY+ RFN RITRPGR+
Sbjct: 61 YLFSPINGEGKAERAVVEQYFKVNYTHRFNVGRITRPGRF 100
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +EI++ELR +D I+ N ++ + D Y Y D CA+W + CF NDILNLD +++++E
Sbjct: 114 MIRREIFQELRQLDNIIQNATVTY--DGDTYTYKDNCARWENECFENDILNLDAIMDDIE 171
Query: 61 TKALNLTFPIRFTFSP 76
T LNLTFP F F+P
Sbjct: 172 TGQLNLTFP--FMFNP 185
>gi|195023480|ref|XP_001985702.1| GH20944 [Drosophila grimshawi]
gi|193901702|gb|EDW00569.1| GH20944 [Drosophila grimshawi]
Length = 1276
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 80/93 (86%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYF+I+P+LLT++C+TG+Q++ +++DPEYLFSP +
Sbjct: 79 CGISCVDKTLNKSFYHLGICIAKHPGYFVIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIN 138
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GK ERAIVEQYFK+NY+ RFN RITRPGR+
Sbjct: 139 GEGKAERAIVEQYFKVNYTHRFNVGRITRPGRF 171
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML +E++ ELR++D ++ N + + D + Y D CA+W + CF NDILNLD +++++E
Sbjct: 185 MLRREVFMELRILDNLIQNATTFY--DGDRFTYKDNCARWENECFENDILNLDALMDDIE 242
Query: 61 TKALNLTFPIRFT 73
+ LNLTFPI F
Sbjct: 243 SGQLNLTFPIMFN 255
>gi|307211261|gb|EFN87447.1| Patched domain-containing protein 3 [Harpegnathos saltator]
Length = 1098
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 78/91 (85%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
LKCVD+ L R F KLG+ + RHPGYF+IVP+LL IC TG+QRI +E+DPEYLFSP +GP
Sbjct: 5 LKCVDDFLNRAFHKLGLVVGRHPGYFVIVPLLLACICFTGYQRIHYEIDPEYLFSPINGP 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GKTERA+VEQYFK+NYS +F+ +RITRPGR+
Sbjct: 65 GKTERAVVEQYFKVNYSYQFDLSRITRPGRF 95
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML KEIW+EL +D I+ + + + + + Y+ ICA+W+ CF N+IL+L +VI EVE
Sbjct: 109 MLKKEIWQELIELDRIIKDIKADY--EGETFTYEHICARWLSECFGNNILDLHHVIAEVE 166
Query: 61 TKALNLTFPI 70
LNLTFP+
Sbjct: 167 RGDLNLTFPL 176
>gi|195380899|ref|XP_002049194.1| GJ20884 [Drosophila virilis]
gi|194143991|gb|EDW60387.1| GJ20884 [Drosophila virilis]
Length = 1196
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 80/93 (86%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYF+I+P+++T++C+TG+Q++ +++DPEYLFSP +
Sbjct: 10 CGISCVDKTLNKSFYHLGICIAKHPGYFVIIPVMITLLCMTGYQQLKYQIDPEYLFSPIN 69
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GK ERA+VEQYFK+NY+ RFN RITRPGR+
Sbjct: 70 GEGKAERALVEQYFKVNYTHRFNVGRITRPGRF 102
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML +EI+ ELR +D ++ N + + D + Y D CA+W + CF NDILNLD +++++E
Sbjct: 116 MLRREIFMELRQLDNLIQNATTTY--DGDTFSYKDNCARWENECFENDILNLDALMDDIE 173
Query: 61 TKALNLTFPIRFT 73
+ LNLTFPI F
Sbjct: 174 SGQLNLTFPIMFN 186
>gi|380020532|ref|XP_003694137.1| PREDICTED: patched domain-containing protein 3-like [Apis florea]
Length = 1045
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 74/91 (81%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
L CVD+ L R F KLG+ + HPGYF+IVP+LL IC TG+QRI +E+DPEYLFSP +GP
Sbjct: 5 LTCVDDFLNRAFHKLGLIVGHHPGYFVIVPVLLACICFTGYQRIHYEIDPEYLFSPINGP 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
KTERAIVEQYFK+NYS RFN RITRPGR+
Sbjct: 65 SKTERAIVEQYFKVNYSHRFNLGRITRPGRF 95
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L ++ ELR +D+ + NT ++ + + + Y ICA+W+D+CF NDIL+L ++IE VE
Sbjct: 109 LLRTVVFNELRELDKTIRNTKAMY--EGEEFSYSQICARWLDTCFNNDILDLHHIIEYVE 166
Query: 61 TKALNLTFPI 70
K LNLTFP+
Sbjct: 167 KKELNLTFPV 176
>gi|307190579|gb|EFN74561.1| Patched domain-containing protein 3 [Camponotus floridanus]
Length = 1111
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 76/91 (83%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
L CVD+ L R F+KLG+ + RHPGYF+IVPIL+ IC TG+QRI +E+DPEYLFSP +GP
Sbjct: 65 LTCVDDFLNRAFYKLGLTVGRHPGYFVIVPILMACICFTGYQRINYEIDPEYLFSPVNGP 124
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
KTERAIVEQYFK+NYS +FN RITRPGR+
Sbjct: 125 SKTERAIVEQYFKVNYSHQFNVGRITRPGRF 155
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML IWKEL +D I+ N + +D+ + Y+ ICA+W++ CF NDILNL VI+EVE
Sbjct: 169 MLKSSIWKELMELDRIIKNIKAKY--EDEEFTYNQICARWLEECFTNDILNLHQVIDEVE 226
Query: 61 TKALNLTFPI 70
+ LNLTFPI
Sbjct: 227 RRKLNLTFPI 236
>gi|127462001|gb|ABO28476.1| patched-related protein [Apis mellifera scutellata]
Length = 1047
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 74/91 (81%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
L CVD+ L R F KLG+ + HPGYF+IVP+LL IC TG+QRI +E+DPEYLFSP +GP
Sbjct: 5 LTCVDDFLNRAFHKLGLVVGHHPGYFVIVPVLLACICFTGYQRIHYEIDPEYLFSPINGP 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
KTERAIVEQYFK+NYS RFN RITRPGR+
Sbjct: 65 SKTERAIVEQYFKVNYSHRFNLGRITRPGRF 95
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L ++ ELR +D+ + N ++ + + + Y ICA+W+D+CF NDIL+L ++IE VE
Sbjct: 109 LLRTVVFNELRELDKTIRNAKAMY--EGEEFNYSQICARWLDTCFNNDILDLHHIIEYVE 166
Query: 61 TKALNLTFPI 70
K LNLTFP+
Sbjct: 167 KKELNLTFPV 176
>gi|195353826|ref|XP_002043404.1| GM16477 [Drosophila sechellia]
gi|194127527|gb|EDW49570.1| GM16477 [Drosophila sechellia]
Length = 1169
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 79/93 (84%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++ +TG+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDKTLNKSFYHLGICIAKHPGYFIIIPVLLTLLGMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GKTERAIVEQYFK+NY+ RFN RITRPGR+
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPGRF 95
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D I+ N + + D Y+ D CA+W + CF NDILNLD +++++E
Sbjct: 109 MIRREVFQELRQLDNIIQNATTTYDGDTYTYK--DNCARWENECFENDILNLDALMDDIE 166
Query: 61 TKALNLTFPIRFTFSP 76
LNLTFP F F+P
Sbjct: 167 AGQLNLTFP--FMFNP 180
>gi|195124712|ref|XP_002006835.1| GI21282 [Drosophila mojavensis]
gi|193911903|gb|EDW10770.1| GI21282 [Drosophila mojavensis]
Length = 1229
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 80/93 (86%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYF+I+P+++T++C+TG+Q++ +++DPEYLFSP +
Sbjct: 62 CGISCVDRTLNKSFYHLGICIAKHPGYFVIIPVMITLLCMTGYQQLKYQIDPEYLFSPIN 121
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GK ERA+VEQYFK+NY+ RFN RITRPGR+
Sbjct: 122 GEGKAERALVEQYFKVNYTHRFNVGRITRPGRF 154
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML +E++ ELR +D ++ N S + D + Y DICA+W + CF NDILNLD +++++E
Sbjct: 168 MLRREVFMELRQLDNLIQNASTTY--DGDTFTYKDICARWENECFENDILNLDALMDDIE 225
Query: 61 TKALNLTFPIRFT 73
+ LNLTFPI F
Sbjct: 226 SGQLNLTFPIMFN 238
>gi|442622428|ref|NP_001260723.1| Patched-related, isoform E [Drosophila melanogaster]
gi|440214106|gb|AGB93257.1| Patched-related, isoform E [Drosophila melanogaster]
Length = 94
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 79/92 (85%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++C+TG+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDKTLNKSFYHLGICIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGR 203
G GKTERAIVEQYFK+NY+ RFN RITRPG+
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPGK 94
>gi|350402071|ref|XP_003486358.1| PREDICTED: patched domain-containing protein 3-like [Bombus
impatiens]
Length = 1043
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 74/92 (80%)
Query: 113 GLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHG 172
L CVD+ L R F KLG+ + RHPGYF+IVP+L+ IC TG+QRI +E+DPEYLFSP +G
Sbjct: 4 NLTCVDDFLNRAFHKLGLVVGRHPGYFVIVPVLVAFICFTGYQRIHYEIDPEYLFSPTNG 63
Query: 173 PGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P K ERAIVEQYFK+NYS +FN RITRPGR+
Sbjct: 64 PSKMERAIVEQYFKVNYSHKFNLGRITRPGRF 95
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVF-GEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEV 59
+L ++ ELR +D+++ NT + GE+ + Y ICAKW+D+CF NDIL+L +VIE+V
Sbjct: 109 LLRTVVFDELRQLDKMIRNTKATYEGEE---FTYSQICAKWLDTCFNNDILDLHHVIEDV 165
Query: 60 ETKALNLTFPI 70
E + LNLTFP+
Sbjct: 166 EKRELNLTFPV 176
>gi|442622426|ref|NP_001260722.1| Patched-related, isoform D [Drosophila melanogaster]
gi|440214105|gb|AGB93256.1| Patched-related, isoform D [Drosophila melanogaster]
Length = 94
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 78/91 (85%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYFII+P+LLT++C+TG+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDKTLNKSFYHLGICIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPG 202
G GKTERAIVEQYFK+NY+ RFN RITRPG
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPG 93
>gi|383851342|ref|XP_003701192.1| PREDICTED: patched domain-containing protein 3-like [Megachile
rotundata]
Length = 1043
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 75/91 (82%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
L CVD+ L R F KLG+ + R+PGYF++VP+LL IC TG+QRI +E+DPEYLFSP +GP
Sbjct: 5 LTCVDDFLNRAFHKLGLIVGRYPGYFVVVPVLLACICFTGYQRIHYEIDPEYLFSPTNGP 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
KTERAIVEQYFK+NYS F+ +RITRPGR+
Sbjct: 65 SKTERAIVEQYFKVNYSHHFDLSRITRPGRF 95
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L ++ EL +D ++ + D + Y ICAKW+D+CF N+IL+L +VIE+VE
Sbjct: 109 LLRTAVFDELLELDRLIRTAKATY--DGAEFTYSQICAKWLDTCFSNNILDLHHVIEDVE 166
Query: 61 TKALNLTFPI 70
+ LNLTFP+
Sbjct: 167 KRELNLTFPV 176
>gi|340727146|ref|XP_003401911.1| PREDICTED: patched domain-containing protein 3-like [Bombus
terrestris]
Length = 1043
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%)
Query: 113 GLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHG 172
L CVD+ L R F KLG+ + HPGYF+IVP+L+ IC TG+QRI +E+DPEYLFSP +G
Sbjct: 4 NLTCVDDFLNRAFHKLGLVVGHHPGYFVIVPVLVACICFTGYQRIHYEIDPEYLFSPTNG 63
Query: 173 PGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P K ERAIVEQYFK+NYS +FN RITRPGR+
Sbjct: 64 PSKMERAIVEQYFKVNYSHKFNLGRITRPGRF 95
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVF-GEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEV 59
+L ++ ELR +D+++ NT + GE+ + Y ICAKW+D+CF NDIL+L +VIE+V
Sbjct: 109 LLRTAVFDELRQLDKMIRNTKATYEGEE---FSYSQICAKWLDTCFNNDILDLHHVIEDV 165
Query: 60 ETKALNLTFPI 70
E + LNLTFP+
Sbjct: 166 EKRELNLTFPV 176
>gi|189240857|ref|XP_969210.2| PREDICTED: similar to Ptc-related CG11212-PA [Tribolium castaneum]
gi|270013723|gb|EFA10171.1| hypothetical protein TcasGA2_TC012361 [Tribolium castaneum]
Length = 1093
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 86/126 (68%), Gaps = 3/126 (2%)
Query: 79 ATIDPRRRLCVNTAQEQFLTPLSFPCPQISMAGCGLKCVDNTLKRLFFKLGVFIARHPGY 138
A I P RR N E+ P+ +P + GLK VD L + F+KLG+ + RHPGY
Sbjct: 16 AEIPPVRRFLANFKPER---PMKYPYTFTAKMMVGLKIVDELLNKSFYKLGLVVGRHPGY 72
Query: 139 FIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRI 198
F+++P+LLT++ +TGFQRI +DPEYLFSP +G GK ERAIVE +FK+NY+ RFN RI
Sbjct: 73 FLVIPVLLTLLGMTGFQRIHTNIDPEYLFSPVNGEGKIERAIVESFFKVNYTTRFNVARI 132
Query: 199 TRPGRY 204
TR GR+
Sbjct: 133 TRAGRF 138
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L IWKELRL+D I+ N ++ D Q + Y DICAKW+ CF NDILNLDY+++EVE
Sbjct: 152 LLRTVIWKELRLLDNIIQNMTVY--HDFQYFTYRDICAKWMSECFQNDILNLDYIMDEVE 209
Query: 61 TKALNLTFPIRFT 73
T ALNLTFP+ F
Sbjct: 210 TGALNLTFPLMFN 222
>gi|322801928|gb|EFZ22481.1| hypothetical protein SINV_13506 [Solenopsis invicta]
Length = 1050
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
L CVD+ L R F+K+G+ + RHPGYFIIVPILL IC TG+QRI +E+DPEYLFSP +GP
Sbjct: 6 LTCVDDFLNRAFYKVGLVVGRHPGYFIIVPILLACICFTGYQRIHYEIDPEYLFSPVNGP 65
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
KTERAIVEQYFK+NYS +F+ +RITRPGR+
Sbjct: 66 SKTERAIVEQYFKVNYS-QFSFSRITRPGRF 95
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML IW+ELR +D I+ N ++ + +D+ + YD ICA+W + C N+ILNL ++++EVE
Sbjct: 109 MLKSAIWQELRELDWIIRNITVKY--EDEEFTYDKICAQWNNECVKNNILNLHHIMKEVE 166
Query: 61 TKALNLTFPIRFTFSP 76
+ NLTFP+ P
Sbjct: 167 ERKRNLTFPVTINLDP 182
>gi|345493576|ref|XP_001602940.2| PREDICTED: patched domain-containing protein 3-like [Nasonia
vitripennis]
Length = 1017
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 76/91 (83%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+ CVD+ L + F K+G+ + RHP YF+I+P++L ++C TGFQRI +E+DPEYLFSP +GP
Sbjct: 5 ITCVDDFLNKAFHKIGLIVGRHPAYFVIIPVILALLCFTGFQRIHYEIDPEYLFSPINGP 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GKTERAIVE++FK+NYS +F+ RITRPGR+
Sbjct: 65 GKTERAIVEEHFKLNYSEKFSLERITRPGRF 95
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML + +W ELR++D+++ N + V D Q Y YDDICA+W+ C N +L ++ +IE VE
Sbjct: 109 MLRRAVWDELRILDQLIKNATAV--HDGQTYTYDDICARWLGECQENSVLEMESIIEFVE 166
Query: 61 TKALNLTFPIRFT 73
LN+TFPI F
Sbjct: 167 NGELNVTFPIFFN 179
>gi|357629491|gb|EHJ78223.1| hypothetical protein KGM_05965 [Danaus plexippus]
Length = 1057
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 75/94 (79%)
Query: 111 GCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQ 170
GC L VD+ L R F+KLG+ + + PGYFII+P+LLT++ +TG+QR+ +EMDPEYLFSP
Sbjct: 2 GCKLTFVDDILNRSFYKLGLVVGKQPGYFIIIPVLLTLLMVTGYQRVHYEMDPEYLFSPV 61
Query: 171 HGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GK ER+IVE++FK+NYS RFN R+TR GR+
Sbjct: 62 SGQGKLERSIVEEHFKVNYSHRFNVGRVTRAGRF 95
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L E+WKELR +DE V N ++ ED + + Y + CA+W CF NDILNLD +I EVE
Sbjct: 109 LLRTEVWKELRQLDEYVQNITVTL-EDGETFTYKEECARWEGQCFVNDILNLDKIIGEVE 167
Query: 61 TKALNLTFPIRFT 73
LNLTFPI F
Sbjct: 168 RGELNLTFPIMFN 180
>gi|242022973|ref|XP_002431911.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517255|gb|EEB19173.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1087
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
ML EIWKELRL+DE++ NT+ + + + + Y ++CAKW++ CF NDILNLDYV+E++E
Sbjct: 59 MLRVEIWKELRLLDELIQNTTAEY--EGETFTYREVCAKWINECFQNDILNLDYVMEDIE 116
Query: 61 TKALNLTFPIRFT 73
+K LNLTFPI F
Sbjct: 117 SKELNLTFPIMFN 129
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 111 GCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITG-FQRI 157
GCG+ VD L R FF+LG+F+ ++PGYF+I+PIL+ ++C+TG F RI
Sbjct: 2 GCGVTFVDKFLTRNFFRLGMFVGKNPGYFLIIPILVALLCLTGRFGRI 49
>gi|242003687|ref|XP_002436205.1| patched domain-containing protein (Ptchd), putative [Ixodes
scapularis]
gi|215499541|gb|EEC09035.1| patched domain-containing protein (Ptchd), putative [Ixodes
scapularis]
Length = 369
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+ CVD + LF +G FIA++PGYFIIVP+L+ + TG QR+ + DPEYLFSP +G
Sbjct: 11 MDCVDRAVSWLFQVVGEFIAKYPGYFIIVPLLVAMCLATGIQRMIYVDDPEYLFSPVNGR 70
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
ER +VE F N S F+ R T+P ++
Sbjct: 71 SHDERRVVEALFPQNTSYNFDIGRQTKPEKF 101
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L++++W E+ ++D+I+ N ++++ DD ++ Y+ ICA+ C+PN++L+ I+++E
Sbjct: 114 LLSRKVWDEIIMLDQIIKNMTVLW--DDDIWTYEQICARNGRPCYPNEMLDFYPYIDQIE 171
Query: 61 TKALNLTFPIR 71
L +P+R
Sbjct: 172 NGTFKLEYPLR 182
>gi|391346173|ref|XP_003747353.1| PREDICTED: patched domain-containing protein 3-like [Metaseiulus
occidentalis]
Length = 1048
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CVD + ++F LG IAR PGY+I+VP+++ I TG Q I ++ DPEYLFSP +G
Sbjct: 37 CVDKWVSKVFRALGESIARTPGYYIVVPLMIAITLSTGMQTIRYQDDPEYLFSPVNGQSH 96
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRY 204
+R + Q F N S F+ +R+ ++
Sbjct: 97 FDRERLFQLFPQNTSESFDISRLVTTEKF 125
>gi|328784803|ref|XP_003250500.1| PREDICTED: LOW QUALITY PROTEIN: patched domain-containing protein 3
[Apis mellifera]
Length = 993
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+L ++ ELR +D+ + N ++ + + + Y ICA+W+D+CF NDIL+L ++IE VE
Sbjct: 55 LLRTVVFNELRELDKTIRNAKAMY--EGEEFNYSQICARWLDTCFNNDILDLHHIIEYVE 112
Query: 61 TKALNLTFPI 70
K LNLTFP+
Sbjct: 113 KKELNLTFPV 122
>gi|312066577|ref|XP_003136336.1| hypothetical protein LOAG_00748 [Loa loa]
gi|307768497|gb|EFO27731.1| hypothetical protein LOAG_00748 [Loa loa]
Length = 972
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C++ L RLF++ G ++A+HP FI +PIL+T C I DP YLF+P++ P K
Sbjct: 6 CIEGPLSRLFYRYGRYVAQHPLPFIAIPILITAFCSISLLHIHPVTDPTYLFTPRNAPSK 65
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRYI 205
ER I+ + ++Y+ + P R R I
Sbjct: 66 YERQIIHNLWPLHYN-NYIPGRAVTQSREI 94
>gi|334348812|ref|XP_001375968.2| PREDICTED: patched domain-containing protein 3-like [Monodelphis
domestica]
Length = 899
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 105 PQISMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEM--- 161
PQ+ C C++ L RLF +LG +AR+P F+++P+LL+ +GF +F
Sbjct: 39 PQVRRPQCRSDCIEFPLSRLFRRLGRVVARYPWVFLLLPVLLSAGLGSGF--MFLNKRRT 96
Query: 162 -DPEYLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
+ E F+P GP K ER++ ++YF + S RF+ +R+T G +
Sbjct: 97 DNIEEQFTPIGGPAKGERSLAQEYFPTDDSKRFSVSRLTTEGSF 140
>gi|260830202|ref|XP_002610050.1| hypothetical protein BRAFLDRAFT_238030 [Branchiostoma floridae]
gi|229295413|gb|EEN66060.1| hypothetical protein BRAFLDRAFT_238030 [Branchiostoma floridae]
Length = 814
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C++ ++ LF + G F+ARHP F+++ IL+ G + E E L++P +G GK
Sbjct: 5 CIEKVIRHLFRQYGRFLARHPLPFLLLSILVAGGLGAGMYFLDTESSVEDLYTPDNGRGK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGR 203
TERA V+Q+F N S F TR+ GR
Sbjct: 65 TERAYVQQHFPTNDSTTFQATRLINLGR 92
>gi|170595953|ref|XP_001902583.1| Patched family protein [Brugia malayi]
gi|158589661|gb|EDP28567.1| Patched family protein [Brugia malayi]
Length = 1006
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C++ L RLF++ G ++A+HP FI +P+L+T +C I DP YLF+P++ P K
Sbjct: 21 CIERPLSRLFYRYGQYVAQHPLPFIAIPVLITALCSISLLHIHPVTDPVYLFTPRNAPSK 80
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGR 203
ER I+ + + Y+ + P R R
Sbjct: 81 YERQIIHNLWPLYYN-NYIPGRAVTQSR 107
>gi|260835990|ref|XP_002612990.1| hypothetical protein BRAFLDRAFT_74780 [Branchiostoma floridae]
gi|229298372|gb|EEN68999.1| hypothetical protein BRAFLDRAFT_74780 [Branchiostoma floridae]
Length = 600
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
++ ++RLF + G F+ARHP F+++ IL+ G + E E L++P + GKT
Sbjct: 6 IEKAIRRLFRQYGRFLARHPLSFLLLSILVAGGLGAGMYFLDTESSLEDLYAPDNARGKT 65
Query: 177 ERAIVEQYFKMNYSARFNPTRITRPGR 203
ERA V+Q+F N SA F TR+ GR
Sbjct: 66 ERAYVQQHFPTNDSATFQATRLINLGR 92
>gi|260787920|ref|XP_002588999.1| hypothetical protein BRAFLDRAFT_87471 [Branchiostoma floridae]
gi|229274172|gb|EEN45010.1| hypothetical protein BRAFLDRAFT_87471 [Branchiostoma floridae]
Length = 950
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGF-----QRIFFEMDPEYLFSPQ 170
C++ L+RLF G +AR+P F I+PIL+ +G QR E D EYLF+P
Sbjct: 5 CIERRLRRLFELYGGLVARYPLPFFIIPILVAGCLGSGMYLLPTQR---EFDTEYLFTPT 61
Query: 171 HGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
+G KTER++++ +F N S F R+ GR+
Sbjct: 62 NGEAKTERSVIQDHFSTNVSNNFRLNRLDVFGRF 95
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 1 MLTKEIWKE-LRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNL-DY 54
+L + + +E LRL + +++N S+ D YRY D+CA W C N+IL L DY
Sbjct: 108 ILQQHMMEEVLRLHEFVLNNVSV--EHDGHTYRYQDLCAAWQGKCDSNEILELIDY 161
>gi|260837017|ref|XP_002613502.1| hypothetical protein BRAFLDRAFT_208336 [Branchiostoma floridae]
gi|229298887|gb|EEN69511.1| hypothetical protein BRAFLDRAFT_208336 [Branchiostoma floridae]
Length = 851
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CVD + R+F G F+ARHP F+++P+LL G + + E L++P +G GK
Sbjct: 5 CVDRGISRVFAAYGGFLARHPIPFLVLPLLLAGGLGAGMYFMASDSSVEGLYTPDNGRGK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGR 203
TERA+V+Q+F +N S F +R+ GR
Sbjct: 65 TERAVVQQHFPLNDSDAFQASRLVTFGR 92
>gi|195580910|ref|XP_002080277.1| GD10331 [Drosophila simulans]
gi|194192286|gb|EDX05862.1| GD10331 [Drosophila simulans]
Length = 1061
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D I+ N + + D Y+ D CA+W + CF NDILNLD +++++E
Sbjct: 1 MIRREVFQELRQLDNIIQNATTTYDGDTYTYK--DNCARWENECFENDILNLDALMDDIE 58
Query: 61 TKALNLTFPIRFTFSP 76
LNLTFP F F+P
Sbjct: 59 AGQLNLTFP--FMFNP 72
>gi|402589912|gb|EJW83843.1| hypothetical protein WUBG_05244, partial [Wuchereria bancrofti]
Length = 110
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C++ L +LF++ G ++A+HP FI +PIL+T +C I DP YLF+P++ P K
Sbjct: 21 CIERPLSQLFYRYGRYVAQHPLPFITIPILITALCSVSLLHIHPVTDPIYLFTPRNAPSK 80
Query: 176 TERAIVEQYFKMNY 189
ER I+ + + Y
Sbjct: 81 YERQIIHNLWPLYY 94
>gi|260807180|ref|XP_002598387.1| hypothetical protein BRAFLDRAFT_96869 [Branchiostoma floridae]
gi|229283659|gb|EEN54399.1| hypothetical protein BRAFLDRAFT_96869 [Branchiostoma floridae]
Length = 952
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGF-----QRIFFEMDPEYLFSPQ 170
C++ L+RLF G +AR+P F+I+PIL+ +G QR E D EYLF+P
Sbjct: 5 CIERRLRRLFELYGGLVARYPLPFLIIPILVAGCLGSGMYLLPTQR---EYDTEYLFTPT 61
Query: 171 HGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
+G KTER++++ +F N S F ++ GR+
Sbjct: 62 NGEAKTERSVIQDHFPTNVSDNFRQNKLDVFGRF 95
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNL-DY 54
+L + + +E+ + EIV N ++ D Q YRY+D+C W C N+IL L DY
Sbjct: 108 ILQQRMMEEVLRLHEIVLN-NVSVDHDGQTYRYEDLCVAWQGKCDSNEILELIDY 161
>gi|260830212|ref|XP_002610055.1| hypothetical protein BRAFLDRAFT_125689 [Branchiostoma floridae]
gi|229295418|gb|EEN66065.1| hypothetical protein BRAFLDRAFT_125689 [Branchiostoma floridae]
Length = 918
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C+ + RLF G F+ARHP F+++P++L G + E E L++P +G GK
Sbjct: 5 CIARRISRLFALYGGFLARHPLPFLVLPVMLAAGLGVGMYFLESESSVEGLYTPDNGQGK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGR 203
ERA+V +F +N S F +R+ GR
Sbjct: 65 AERAVVRVHFPVNDSNDFQASRLVTFGR 92
>gi|291407217|ref|XP_002720006.1| PREDICTED: patched domain containing 1 [Oryctolagus cuniculus]
Length = 977
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 99 LRTFFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 158
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 159 VNSLFPVNRSKHRLYSDLQTPGRY 182
>gi|260789528|ref|XP_002589798.1| hypothetical protein BRAFLDRAFT_90480 [Branchiostoma floridae]
gi|229274981|gb|EEN45809.1| hypothetical protein BRAFLDRAFT_90480 [Branchiostoma floridae]
Length = 936
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDP--EYLFSPQHGP 173
C++ L+RLF G +AR+P F I+PIL+ +G + + + EYLF+P +G
Sbjct: 5 CIERRLRRLFEHYGGLVARYPLPFFIIPILVAGGLASGMYLLPTQQESGVEYLFTPTNGE 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
KTER++++ +F N + F +R+ GR+
Sbjct: 65 AKTERSVIQDHFSTNVTDNFQQSRLAVFGRF 95
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 10 LRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNL-DYVIEEVETKALNLTF 68
LRL + +++N S+ + Q YRY+D+CA W C N+ L L DY +V+ N T
Sbjct: 118 LRLHEFVLNNISV--DHEGQTYRYEDLCAAWQGKCDSNEFLELVDYNASQVQ----NTTI 171
Query: 69 PIRFTFSP 76
+FSP
Sbjct: 172 LYPTSFSP 179
>gi|335305782|ref|XP_001926295.3| PREDICTED: patched domain-containing protein 1 [Sus scrofa]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|148271102|ref|NP_001087219.1| patched domain-containing protein 1 [Mus musculus]
gi|341941763|sp|Q14B62.2|PTHD1_MOUSE RecName: Full=Patched domain-containing protein 1
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|109732656|gb|AAI16313.1| Patched domain containing 1 [Mus musculus]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|300795362|ref|NP_001178663.1| patched domain-containing protein 1 [Rattus norvegicus]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|332224082|ref|XP_003261195.1| PREDICTED: patched domain-containing protein 1 isoform 1 [Nomascus
leucogenys]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|297709570|ref|XP_002831501.1| PREDICTED: patched domain-containing protein 1 [Pongo abelii]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|109732728|gb|AAI16314.1| Patched domain containing 1 [Mus musculus]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|148271104|ref|NP_775766.2| patched domain-containing protein 1 [Homo sapiens]
gi|397497649|ref|XP_003819618.1| PREDICTED: patched domain-containing protein 1 [Pan paniscus]
gi|146331074|sp|Q96NR3.2|PTHD1_HUMAN RecName: Full=Patched domain-containing protein 1
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|300797881|ref|NP_001179810.1| patched domain-containing protein 1 [Bos taurus]
gi|296470538|tpg|DAA12653.1| TPA: patched domain containing 1-like [Bos taurus]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|109130178|ref|XP_001088008.1| PREDICTED: patched domain-containing protein 1 [Macaca mulatta]
gi|402909695|ref|XP_003917546.1| PREDICTED: patched domain-containing protein 1 [Papio anubis]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|74006601|ref|XP_849603.1| PREDICTED: patched domain-containing protein 1 isoform 3 [Canis
lupus familiaris]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|410988260|ref|XP_004000404.1| PREDICTED: patched domain-containing protein 1 [Felis catus]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|395838087|ref|XP_003791957.1| PREDICTED: patched domain-containing protein 1 [Otolemur garnettii]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|68404314|ref|XP_690754.1| PREDICTED: patched domain-containing protein 1 [Danio rerio]
Length = 887
Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F KLG F+A HP +F P+L++I+ F R E + EYL +P+H K E +
Sbjct: 10 LRTSFHKLGHFVANHPVFFASAPVLISILLGASFSRYRIEENVEYLLAPKHSLAKIEGNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V+ F +N S + + PGRY
Sbjct: 70 VDSLFPVNRSKHTLYSDLQTPGRY 93
>gi|194385052|dbj|BAG60932.1| unnamed protein product [Homo sapiens]
Length = 888
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|410909385|ref|XP_003968171.1| PREDICTED: patched domain-containing protein 1-like isoform 1
[Takifugu rubripes]
Length = 916
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F LG F+A HP +F P+LL+I+ F R E D E L +P+H K E +
Sbjct: 10 LRTSFHALGRFVASHPVFFASAPVLLSILLGASFSRYRVEEDVESLLAPKHSLAKIEGNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
VE F +N S + + PGRY
Sbjct: 70 VESLFPVNRSKHALYSDLQTPGRY 93
>gi|334329517|ref|XP_001366520.2| PREDICTED: patched domain-containing protein 1 [Monodelphis
domestica]
Length = 888
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E + E+L +P+H K ER +
Sbjct: 10 LRTSFSRLGHFIASHPVFFASAPVLISILLGASFSRYQIEENVEHLLAPKHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|410909387|ref|XP_003968172.1| PREDICTED: patched domain-containing protein 1-like isoform 2
[Takifugu rubripes]
Length = 904
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F LG F+A HP +F P+LL+I+ F R E D E L +P+H K E +
Sbjct: 10 LRTSFHALGRFVASHPVFFASAPVLLSILLGASFSRYRVEEDVESLLAPKHSLAKIEGNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
VE F +N S + + PGRY
Sbjct: 70 VESLFPVNRSKHALYSDLQTPGRY 93
>gi|291241487|ref|XP_002740641.1| PREDICTED: PaTched Related family member (ptr-2)-like [Saccoglossus
kowalevskii]
Length = 1246
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 45/89 (50%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C ++ LK + + G + +P FII PILLT G D EYLF+P +GP K
Sbjct: 5 CFESRLKVVLCRYGRVVGNYPIPFIIFPILLTFSLALGGFYFTRNNDIEYLFTPTNGPAK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRY 204
R +E +F NYS F R T GRY
Sbjct: 65 KHRDELESFFPANYSGEFLTNRQTHVGRY 93
>gi|440904474|gb|ELR54985.1| Patched domain-containing protein 1, partial [Bos grunniens mutus]
Length = 864
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 125 FFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQY 184
F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +V
Sbjct: 1 FSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNLVNSL 60
Query: 185 FKMNYSARFNPTRITRPGRY 204
F +N S + + PGRY
Sbjct: 61 FPVNRSKHRLYSDLQTPGRY 80
>gi|348561301|ref|XP_003466451.1| PREDICTED: patched domain-containing protein 1-like [Cavia
porcellus]
Length = 888
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
++ F +LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +
Sbjct: 10 VRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|395518804|ref|XP_003763547.1| PREDICTED: patched domain-containing protein 1 [Sarcophilus
harrisii]
Length = 888
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F P+L++I+ F R E E+L +P+H K ER +
Sbjct: 10 LRTSFSRLGHFIASHPVFFASAPVLISILLGASFSRYQIEESVEHLLAPKHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|348503590|ref|XP_003439347.1| PREDICTED: patched domain-containing protein 1-like [Oreochromis
niloticus]
Length = 912
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F LG F+A HP +F P+LL+I+ + F R E D E L +P+H K E +
Sbjct: 10 LRTSFHALGRFVASHPVFFASAPVLLSILLGSSFSRYRVEEDVESLLAPKHSLAKIEGNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V+ F +N S + + PGRY
Sbjct: 70 VDSLFPVNRSKHALYSDLQTPGRY 93
>gi|300676840|gb|ADK26715.1| hypothetical protein [Zonotrichia albicollis]
Length = 887
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIIC-ITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ F+KLG+F++RHP +F+ VP +LTII + R + D E L +P H K ER+
Sbjct: 10 LQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSLLNRFQPDTDLESLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFSLDQSKSQLYSDLHTPGRY 94
>gi|390334625|ref|XP_003723973.1| PREDICTED: patched domain-containing protein 3-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPG 174
+C+D+ + FFK G ++RH +F+++P+++ I+C+ G + + D YLF+P PG
Sbjct: 13 RCIDHAMTAAFFKFGQLVSRHRIFFLLMPLVVAIVCVHGITCLTIQDDVVYLFTPTGSPG 72
Query: 175 KTERAIVEQYF-KMNYSARFNPTR 197
+ + + + YF + F P R
Sbjct: 73 RADGEVFKTYFPSGDNETEFLPNR 96
>gi|326916827|ref|XP_003204706.1| PREDICTED: patched domain-containing protein C6orf138 homolog
[Meleagris gallopavo]
Length = 887
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIIC-ITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ F+KLG+F++RHP +F+ VP +LTII + R + D E L +P H K ER+
Sbjct: 10 LQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSLLNRFQPDTDLESLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFSLDQSKSQLYSDLHTPGRY 94
>gi|307078142|ref|NP_001182491.1| patched domain-containing protein C6orf138 homolog [Gallus gallus]
Length = 887
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIIC-ITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ F+KLG+F++RHP +F+ VP +LTII + R + D E L +P H K ER+
Sbjct: 10 LQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSLLNRFQPDTDLESLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFSLDQSKSQLYSDLHTPGRY 94
>gi|327268202|ref|XP_003218887.1| PREDICTED: patched domain-containing protein 1-like [Anolis
carolinensis]
Length = 888
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG F+A HP +F P+LL+I+ F R E E+L +P+H + ER +
Sbjct: 10 LRSSFARLGHFVASHPVFFASAPVLLSILLGASFSRYRVEGSVEHLLAPKHSLARIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>gi|403295009|ref|XP_003938449.1| PREDICTED: patched domain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 965
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++VP++LT TGF + + + EY ++P
Sbjct: 129 CHTDCLEAPLSRAFQWLGWQVGAHPWVFLLVPLMLTAALGTGFLYLPKNEQENLEYQYTP 188
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+P+R + +I
Sbjct: 189 VGSPAKAERRFVQGHFTTNDSYRFSPSRRSTESNFI 224
>gi|327274667|ref|XP_003222098.1| PREDICTED: patched domain-containing protein 3-like [Anolis
carolinensis]
Length = 853
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQR--IFFEMDPEYLFSP 169
C CV+ L R LG + HP F +VP+ L GF R + D E F+P
Sbjct: 6 CHTDCVEQPLSRAMRALGACVGSHPWPFFLVPMALAASLGAGFMRLKVLEANDIEEQFTP 65
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GP K+ER++V +F + S RF+ R+T G +
Sbjct: 66 IGGPAKSERSLVRMHFPTDDSERFSARRLTTEGSF 100
>gi|317420146|emb|CBN82182.1| Patched domain-containing protein 1 [Dicentrarchus labrax]
Length = 916
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F LG F+A HP +F P+LL+I+ F R E D E L +P+H K E +
Sbjct: 10 LRTSFHALGRFVASHPVFFASAPVLLSILLGASFSRYRVEEDVESLLAPKHSLAKIEGNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V+ F +N S + + PGRY
Sbjct: 70 VDSLFPVNRSKHALYSDLQTPGRY 93
>gi|224048835|ref|XP_002189223.1| PREDICTED: patched domain-containing protein 4 [Taeniopygia
guttata]
Length = 887
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + L+ F+KLG+F++RHP +F+ VP +LTII + R + D E L +P H
Sbjct: 4 QVIHRGLQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSLLNRFQPDTDLESLVAPSHSL 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 64 AKIERSLASSLFSLDQSKSQLYSDLHTPGRY 94
>gi|301787727|ref|XP_002929280.1| PREDICTED: LOW QUALITY PROTEIN: patched domain-containing protein
1-like [Ailuropoda melanoleuca]
Length = 887
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 127 KLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFK 186
+LG FIA HP +F P+L++I+ F R E E+L +PQH K ER +V F
Sbjct: 15 RLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNLVNSLFP 74
Query: 187 MNYSARFNPTRITRPGRY 204
+N S + + PGRY
Sbjct: 75 VNRSKHRLYSDLQTPGRY 92
>gi|444732730|gb|ELW73005.1| Patched domain-containing protein 3 [Tupaia chinensis]
Length = 909
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 90 NTAQEQFLTPLSFPCPQISMAG-CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTI 148
+ AQE L P+ P++ C C++ L R F +LG + +P F++VP++LT
Sbjct: 156 SVAQESELEPV---VPEVVTGNRCKTDCLEAPLSRAFQRLGWVVGSYPWVFLLVPMVLTA 212
Query: 149 ICITGFQRIFF---EMDPEYLFSPQHGPGKTERAIVEQYFKMNYSARFNPTR 197
+ TGF IF E D E ++P P K ER V+++F N S F+ +R
Sbjct: 213 VLGTGF--IFLPHEEEDLEEQYTPIASPAKAERRFVQEHFLANDSYSFSASR 262
>gi|449271799|gb|EMC82028.1| hypothetical protein A306_10050 [Columba livia]
Length = 846
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + L+ F+KLG+F++RHP +F+ VP +LTII + R + D E L +P H
Sbjct: 21 QGIHRGLQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSLLNRFQPDTDLESLVAPSHSL 80
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 81 AKIERSLASSLFSLDQSKSQLYSDLHTPGRY 111
>gi|410927848|ref|XP_003977352.1| PREDICTED: patched domain-containing protein 1-like [Takifugu
rubripes]
Length = 908
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + LK F+ LG+F++RHP +F+ VP +LTII T R E D E L +P H
Sbjct: 4 QVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPETDLEVLVAPTHSL 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 64 AKIERSLANSLFSIDQSKHKLYSDLHTPGRY 94
>gi|301613066|ref|XP_002936035.1| PREDICTED: patched domain-containing protein C6orf138 homolog
[Xenopus (Silurana) tropicalis]
Length = 888
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGF-QRIFFEMDPEYLFSPQHGP 173
+ + LK +KLG+F++RHP +F+ +P +LTII F R E D E L +P H
Sbjct: 4 QVIHRGLKSSSYKLGLFVSRHPVFFLTLPAVLTIIFGFSFLSRYKTEKDLEALVAPSHSL 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + + PGRY
Sbjct: 64 AKIERSLASSLFPLDQSKKQLYSDLHTPGRY 94
>gi|260805849|ref|XP_002597798.1| hypothetical protein BRAFLDRAFT_238978 [Branchiostoma floridae]
gi|229283066|gb|EEN53810.1| hypothetical protein BRAFLDRAFT_238978 [Branchiostoma floridae]
Length = 845
Score = 59.7 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
++ F K G F+ARHP F++ +L+ I G + E E L++P+ G GK ER
Sbjct: 10 MRHAFQKFGRFLARHPHAFLLSSLLIAGILGGGLFFLGNEGSIEKLYTPEDGLGKVEREY 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V +F +N S F P+R GRY
Sbjct: 70 VRTHFPINDSEHFLPSRAVTAGRY 93
>gi|47222488|emb|CAG13008.1| unnamed protein product [Tetraodon nigroviridis]
Length = 947
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + LK F+ LG+F++RHP +F+ VP +LTII T R E D E L +P H
Sbjct: 14 QVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPETDLEVLVAPTHSL 73
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 74 AKIERSLANSLFPIDQSKHKLYSDLHTPGRY 104
>gi|348544357|ref|XP_003459648.1| PREDICTED: patched domain-containing protein 1-like [Oreochromis
niloticus]
Length = 908
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + LK F+ LG+F++RHP +F+ VP +LTII T R E D E L +P H
Sbjct: 4 QVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPETDLEVLVAPTHSL 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 64 AKIERSLANSLFPIDQSKHKLYSDLHTPGRY 94
>gi|47221125|emb|CAG05446.1| unnamed protein product [Tetraodon nigroviridis]
Length = 138
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPG 174
+ + L+ F LG F+A HP +F P+LL+I+ F R E D E L +P+H
Sbjct: 4 QVLHAGLRTSFHALGRFVASHPVFFASAPVLLSILLGASFSRYRVEEDVESLLAPKHSLA 63
Query: 175 KTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K E +VE F +N S + + GRY
Sbjct: 64 KIEGNLVESLFPVNRSKHALYSDLQTRGRY 93
>gi|71834514|ref|NP_001025356.1| patched domain-containing protein 1 [Danio rerio]
gi|82078608|sp|Q5RIV7.1|PTHD1_DANRE RecName: Full=Patched domain-containing protein 1
Length = 897
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + LK F+ LG+F++RHP +F+ VP +LTII T R E D E L +P H
Sbjct: 4 QVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPETDLEILVAPTHSL 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 64 AKIERSLANSLFPIDQSKHKLYSDLHTPGRY 94
>gi|260794876|ref|XP_002592433.1| hypothetical protein BRAFLDRAFT_67300 [Branchiostoma floridae]
gi|229277652|gb|EEN48444.1| hypothetical protein BRAFLDRAFT_67300 [Branchiostoma floridae]
Length = 772
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
++ F K G F+ARHP F++ +L+ I G + E E L++P+ G GK ER
Sbjct: 11 MRHTFQKFGRFLARHPHAFLLSSLLIAGILGGGLYFLGIEGSIEKLYTPEDGLGKVEREY 70
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
F +N S F P+R GRY
Sbjct: 71 ARTRFPINDSEHFLPSRAVTAGRY 94
>gi|326679774|ref|XP_003201375.1| PREDICTED: patched domain-containing protein 3-like [Danio rerio]
Length = 975
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE----MDPE 164
MAGC CV+ + F K G F+ +P +F I P+L++ + TGF E D E
Sbjct: 1 MAGCTTDCVEKPISICFQKFGRFVGTYPWWFFISPLLISAVLGTGF--CLLEDREANDIE 58
Query: 165 YLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
F+P +GP K ER V+Q F N + F+ R+ G Y
Sbjct: 59 DQFTPVNGPAKQERRFVQQNFPQN-DSLFSNQRLYTDGVY 97
>gi|432945619|ref|XP_004083688.1| PREDICTED: patched domain-containing protein 1-like [Oryzias
latipes]
Length = 908
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + LK F+ LG+F++RHP +F+ VP +LTII T R E D E L +P H
Sbjct: 4 QVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTVLSRFKPERDLEVLVAPTHSL 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 64 AKIERSLANSLFPIDRSKHKLYSDLHTPGRY 94
>gi|344257095|gb|EGW13199.1| Patched domain-containing protein 3 [Cricetulus griseus]
Length = 343
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F +LG + HP F++ P LLT TG +F + E L ++
Sbjct: 56 CHTDCLEAPLSRCFLRLGASVGTHPWLFLLGPALLTAALGTGL--LFLPKEKENLEEQYT 113
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P P K ER V+ +F N + RF+ +R + +
Sbjct: 114 PIGSPAKAERRFVQSHFSTNDTYRFSASRTSSEANF 149
>gi|432929727|ref|XP_004081247.1| PREDICTED: patched domain-containing protein 1-like isoform 2
[Oryzias latipes]
Length = 920
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F LG F+A H +F P+LL+++ F R E D E L +P+H K E ++
Sbjct: 10 LRTSFRALGRFVASHAVFFASAPMLLSVLLGASFSRYRVEDDVESLLAPKHSLAKIEGSL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
VE F +N S + + PGRY
Sbjct: 70 VESLFPVNRSRHALYSDLQTPGRY 93
>gi|402912881|ref|XP_003918966.1| PREDICTED: patched domain-containing protein 3-like, partial [Papio
anubis]
Length = 376
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ ++LT TGF + E D E ++P
Sbjct: 87 CHTDCLEAPLSRAFQWLGWQVGAHPWIFLLASLMLTAALSTGFLHLPKEKEEDLEEYYTP 146
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTR 197
GP K ER V+ +F N S RF+ +R
Sbjct: 147 VGGPAKAERRFVQGHFTTNDSYRFSASR 174
>gi|432929725|ref|XP_004081246.1| PREDICTED: patched domain-containing protein 1-like isoform 1
[Oryzias latipes]
Length = 908
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F LG F+A H +F P+LL+++ F R E D E L +P+H K E ++
Sbjct: 10 LRTSFRALGRFVASHAVFFASAPMLLSVLLGASFSRYRVEDDVESLLAPKHSLAKIEGSL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
VE F +N S + + PGRY
Sbjct: 70 VESLFPVNRSRHALYSDLQTPGRY 93
>gi|167527061|ref|XP_001747863.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773612|gb|EDQ87250.1| predicted protein [Monosiga brevicollis MX1]
Length = 2209
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIF-----FEMDPEYLFSPQH 171
+D TL + F+KLG IARHP F+++P L F RI E DPE L++PQ
Sbjct: 1447 IDFTLSKFFYKLGHVIARHPWLFVVIPFLFM---FGFFIRIMAASVDVETDPEDLYTPQD 1503
Query: 172 GPGKTERAIVEQYF 185
+R +VE++F
Sbjct: 1504 SEAFRQRIVVEEFF 1517
>gi|260807174|ref|XP_002598384.1| hypothetical protein BRAFLDRAFT_232395 [Branchiostoma floridae]
gi|229283656|gb|EEN54396.1| hypothetical protein BRAFLDRAFT_232395 [Branchiostoma floridae]
Length = 855
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C+D + R+F G F+ARHP F+++P+LL G + + E L++P +G GK
Sbjct: 5 CIDKVISRVFAAYGGFLARHPVPFLVLPLLLAGGLGAGMYFMASDSSVEGLYTPDNGRGK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGR 203
TERA+V+Q+F +N S F +RI GR
Sbjct: 65 TERAVVQQHFPLNDSEAFQASRIITNGR 92
>gi|194227081|ref|XP_001495869.2| PREDICTED: patched domain-containing protein 3-like [Equus
caballus]
Length = 1016
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF----EMDPEYLF 167
C C++ L R F LG + HP F++ P++LT TGF ++ E D E +
Sbjct: 177 CHTDCLEAPLSRAFAWLGWMVGSHPWIFLLAPMVLTAALGTGF--VYLPKDEEEDLEEQY 234
Query: 168 SPQHGPGKTERAIVEQYFKMNYSARFNPTR 197
+P P K ER V+ +F +N S RF+ +R
Sbjct: 235 TPIGSPAKAERRFVQAHFTINDSHRFSASR 264
>gi|291225197|ref|XP_002732587.1| PREDICTED: PaTched Related family member (ptr-2)-like, partial
[Saccoglossus kowalevskii]
Length = 551
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
++ LK + G + +P FI++P++LT G D EYLF+P +GP K +
Sbjct: 7 ESRLKVALCRYGRVVGNYPIPFIVLPLMLTFSLAVGGFYFTGNNDIEYLFTPTNGPAKKD 66
Query: 178 RAIVEQYFKMNYSARFNPTRITRPGRY 204
R +++ F MNYS F R + GRY
Sbjct: 67 RDLLDSLFPMNYSGEFLANRQSDFGRY 93
>gi|327387674|gb|AEA72435.1| PTCHD3 isoform 2 [Homo sapiens]
Length = 533
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 114 CHTDCLEGLLSRTFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLEEHYTP 173
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 174 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 209
>gi|194018513|ref|NP_001030014.2| patched domain-containing protein 3 [Homo sapiens]
gi|425906063|sp|Q3KNS1.3|PTHD3_HUMAN RecName: Full=Patched domain-containing protein 3; AltName:
Full=Patched-related protein
Length = 767
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 114 CHTDCLEGLLSRTFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLEEHYTP 173
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 174 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 209
>gi|34532356|dbj|BAC86399.1| unnamed protein product [Homo sapiens]
Length = 804
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 114 CHTDCLEGLLSRTFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLEEHYTP 173
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 174 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 209
>gi|291223905|ref|XP_002731948.1| PREDICTED: PaTched Related family member (ptr-2)-like [Saccoglossus
kowalevskii]
Length = 913
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
LK G + +P FI++P++LT G D EYLF+P +GP K +R +
Sbjct: 10 LKVALCSYGRVVGNYPIPFIVLPLMLTFSLAVGGFYFTGNNDIEYLFTPTNGPAKKDRDV 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
++ F MNYS F R GRY
Sbjct: 70 MDSLFPMNYSGEFLANRQNDFGRY 93
>gi|354495843|ref|XP_003510038.1| PREDICTED: patched domain-containing protein 3 [Cricetulus griseus]
Length = 949
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F +LG + HP F++ P LLT TG +F + E L ++
Sbjct: 114 CHTDCLEAPLSRCFLRLGASVGTHPWLFLLGPALLTAALGTGL--LFLPKEKENLEEQYT 171
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P P K ER V+ +F N + RF+ +R + +
Sbjct: 172 PIGSPAKAERRFVQSHFSTNDTYRFSASRTSSEANF 207
>gi|426364296|ref|XP_004049254.1| PREDICTED: LOW QUALITY PROTEIN: patched domain-containing protein 3
[Gorilla gorilla gorilla]
Length = 955
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 115 CHTDCLEGLLSRAFQWLGWKVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLEEHYTP 174
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 175 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 210
>gi|114629824|ref|XP_507715.2| PREDICTED: patched domain-containing protein 3 [Pan troglodytes]
Length = 955
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 115 CHTDCLEGLLSRAFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDKEEDLEEHYTP 174
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 175 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 210
>gi|397501688|ref|XP_003821510.1| PREDICTED: patched domain-containing protein 3 [Pan paniscus]
Length = 957
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 117 CHTDCLEGLLSRAFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDKEEDLEEHYTP 176
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 177 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 212
>gi|291223903|ref|XP_002731947.1| PREDICTED: PaTched Related family member (ptr-2)-like [Saccoglossus
kowalevskii]
Length = 999
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
LK + G + +P FI++P++LT G D EYLF+P GP K +R +
Sbjct: 10 LKVALCRYGRVVGNYPIPFIVLPLMLTFSLAVGGFYFTGNNDIEYLFTPTDGPAKKDRDL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
++ F MNYS F R GRY
Sbjct: 70 LDSLFPMNYSGEFLANRQNDFGRY 93
>gi|76827276|gb|AAI07140.1| Patched domain containing 3 [Homo sapiens]
Length = 767
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 114 CHTDCLEGLLSRTFQWLGWQVGAHPWIFLLAPLMLTAAPGTGFLYLPKDEEEDLEEHYTP 173
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 174 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 209
>gi|219114903|ref|XP_002178247.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409982|gb|EEC49912.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 342
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG K +D ++ F+ LG F+ P I + IL T++C GF R E E L+ PQ
Sbjct: 33 CGNK-IDGGIQGFFYSLGAFVGSKPRQTIGMAILFTVVCGAGFVRFETESRGEELWVPQD 91
Query: 172 GPGKTERAIVEQYFKMNYSARFNP--TRITRPG 202
+ E + E YF N S RFN + PG
Sbjct: 92 TRAEQETLMYESYF--NSSTRFNTMIVQAANPG 122
>gi|355782708|gb|EHH64629.1| Patched-related protein, partial [Macaca fascicularis]
Length = 809
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 75 SPRRATID--PRRRLCVNTAQEQFLTPLSFPCPQISMAGCGLKCVDNTLKRLFFKLGVFI 132
SPR + +D PR RL ++ A C C++ L R F LG +
Sbjct: 76 SPRPSVLDDAPRLRLELDDAPLPEEETPEPRAICRHRHRCHTDCLEAPLSRAFQWLGWQV 135
Query: 133 ARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYS 190
HP F++ P++LT TGF + E D E ++P GP K ER V+ +F N S
Sbjct: 136 GAHPWIFLLAPLMLTAALGTGFLYLPDEEEEDLEEQYTPVGGPAKAERRFVQGHFTTNDS 195
Query: 191 ARFNPTR 197
RF+ +R
Sbjct: 196 YRFSASR 202
>gi|355562357|gb|EHH18951.1| Patched-related protein, partial [Macaca mulatta]
Length = 805
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 75 SPRRATID--PRRRLCVNTAQEQFLTPLSFPCPQISMAGCGLKCVDNTLKRLFFKLGVFI 132
SPR + +D PR RL ++ A C C++ L R F LG +
Sbjct: 76 SPRPSVLDDAPRLRLELDDAPLPEEETPEPRAICRHRHRCHTDCLEAPLSRAFQWLGWQV 135
Query: 133 ARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYS 190
HP F++ P++LT TGF + E D E ++P GP K ER V+ +F N S
Sbjct: 136 GAHPWIFLLAPLMLTAALGTGFLYLPDEEEEDLEEQYTPVGGPAKAERRFVQGHFTTNDS 195
Query: 191 ARFNPTR 197
RF+ +R
Sbjct: 196 YRFSASR 202
>gi|344277931|ref|XP_003410750.1| PREDICTED: LOW QUALITY PROTEIN: patched domain-containing protein
3-like [Loxodonta africana]
Length = 885
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L F +LG + HP F++ P++LT + TGF + E + E +SP
Sbjct: 83 CHTDCLEAPLNLAFQRLGWAVGSHPWLFLLGPLVLTALLGTGFVHLPKDKEENLEEQYSP 142
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTR 197
P K ER V+++F N S RF+ TR
Sbjct: 143 VGSPAKKERFFVQRHFTTNDSLRFSATR 170
>gi|327274665|ref|XP_003222097.1| PREDICTED: patched domain-containing protein 3-like [Anolis
carolinensis]
Length = 814
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGF--QRIFFEMDPEYLFSP 169
C C++ L R +G + HP F++ P++L+ +GF + D E F+P
Sbjct: 6 CHTDCLERPLSRALRAVGACVGSHPWLFLLGPLVLSAALGSGFILASVRESKDLELQFTP 65
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GP K ER V+ +F + + RF+ R++ G Y
Sbjct: 66 VDGPAKKERRFVQAHFPTDDAQRFSGQRLSSMGTY 100
>gi|109088585|ref|XP_001105179.1| PREDICTED: patched domain-containing protein 3-like [Macaca
mulatta]
Length = 932
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 75 SPRRATID--PRRRLCVNTAQEQFLTPLSFPCPQISMAGCGLKCVDNTLKRLFFKLGVFI 132
SPR + +D PR RL ++ A C C++ L R F LG +
Sbjct: 76 SPRPSVLDDAPRLRLELDDAPLPEEETPEPRAICRHRHRCHTDCLEAPLSRAFQWLGWQV 135
Query: 133 ARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYS 190
HP F++ P++LT TGF + E D E ++P GP K ER V+ +F N S
Sbjct: 136 GAHPWIFLLAPLMLTAALGTGFLYLPDEEEEDLEEQYTPVGGPAKAERRFVQGHFTTNDS 195
Query: 191 ARFNPTR 197
RF+ +R
Sbjct: 196 YRFSASR 202
>gi|219841866|gb|AAI45295.1| LOC627626 protein [Mus musculus]
Length = 350
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R+ E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRLQTEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|109492440|ref|XP_001081846.1| PREDICTED: patched domain-containing protein 3 [Rattus norvegicus]
gi|392351837|ref|XP_003751038.1| PREDICTED: patched domain-containing protein 3 [Rattus norvegicus]
Length = 905
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L F +LG + +P F++ P+LLT TG IF + E L ++
Sbjct: 69 CHTDCLEAPLSSCFLRLGALVGANPWLFLLGPVLLTASLGTGL--IFLPKEKENLEEQYT 126
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P P K ER V+ +F N S RF+ +R + +
Sbjct: 127 PIGSPAKAERRFVQSHFSTNDSYRFSASRTSSETNF 162
>gi|432929681|ref|XP_004081225.1| PREDICTED: patched domain-containing protein 3-like [Oryzias
latipes]
Length = 848
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF----EMDPEYLFSPQH 171
C+ L LF KLG + HP +F I+PI ++ GF +F + D E F+P
Sbjct: 8 CLSKPLSGLFAKLGSTVGSHPLFFFIIPIFVSAALGAGF--VFLKDHEDNDFERQFTPMK 65
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GP K RA+V++ F ++S F+ R+ GR+
Sbjct: 66 GPSKVTRALVKENFPYDHSL-FSEDRLYSGGRF 97
>gi|326913544|ref|XP_003203097.1| PREDICTED: patched domain-containing protein 1-like [Meleagris
gallopavo]
Length = 894
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 131 FIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYS 190
F+A HP +F P+L++I+ F R E E+L +P H K ER +V+ F +N S
Sbjct: 48 FVASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVNRS 107
Query: 191 ARFNPTRITRPGRY 204
+ + PGRY
Sbjct: 108 KHRLYSDLQTPGRY 121
>gi|260791706|ref|XP_002590869.1| hypothetical protein BRAFLDRAFT_239964 [Branchiostoma floridae]
gi|229276067|gb|EEN46880.1| hypothetical protein BRAFLDRAFT_239964 [Branchiostoma floridae]
Length = 843
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 125 FFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQY 184
F + G IA+ P F+ V +L+ G I E E L++P G GK ER ++++
Sbjct: 14 FKEFGRLIAKQPHAFLFVSLLVAGGLGAGLYFIDNENSIEKLYTPDSGAGKVEREYIQEH 73
Query: 185 FKMNYSARFNPTRITRPGRY 204
F +N S F P+R+ GRY
Sbjct: 74 FPINDSEHFLPSRLITSGRY 93
>gi|390334611|ref|XP_003723967.1| PREDICTED: patched domain-containing protein 3-like isoform 1
[Strongylocentrotus purpuratus]
gi|390334613|ref|XP_003723968.1| PREDICTED: patched domain-containing protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 359
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CVD + +F+KLG + +H F++VP+ + +TGF + + EYLF+P++ +
Sbjct: 6 CVDRCISGVFYKLGRQVHKHRLIFLLVPLAMVTFLMTGFTHFVIDDNVEYLFTPENSQSR 65
Query: 176 TERAIVEQYFKM-NYSARFNPTR----ITRPGRYI 205
+RA ++ F + F P R R GR I
Sbjct: 66 DDRATTKELFMTGDEGEEFLPNRELDLFIRRGRLI 100
>gi|260822028|ref|XP_002606405.1| hypothetical protein BRAFLDRAFT_67656 [Branchiostoma floridae]
gi|229291746|gb|EEN62415.1| hypothetical protein BRAFLDRAFT_67656 [Branchiostoma floridae]
Length = 334
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
+ + F K G I + PG F+ V +L+ G I E E L++P G GK ERA
Sbjct: 10 MSKGFKKFGRLITKQPGVFLFVSLLVAGGLGGGLYFIDNENSIEKLYTPDSGAGKVERAY 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V+++F N S F P+R+ GRY
Sbjct: 70 VQEHFPTNDSEHFLPSRLATSGRY 93
>gi|12852005|dbj|BAB29234.1| unnamed protein product [Mus musculus]
Length = 255
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 24 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQTEGDLERLVAPSHSLAKIERS 83
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 84 LASSLFPLDQSKSQLYSDLHTPGRY 108
>gi|332240584|ref|XP_003269467.1| PREDICTED: patched domain-containing protein 3 [Nomascus
leucogenys]
Length = 955
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 115 CHTDCLEGPLCRAFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLEEQYTP 174
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTR 197
P K ER V+ +F N S RF+ +R
Sbjct: 175 VGSPAKAERRFVQGHFTTNDSYRFSASR 202
>gi|260807168|ref|XP_002598381.1| hypothetical protein BRAFLDRAFT_96864 [Branchiostoma floridae]
gi|229283653|gb|EEN54393.1| hypothetical protein BRAFLDRAFT_96864 [Branchiostoma floridae]
Length = 341
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+K + RLF G +AR P F+I +L+ +I GF I E D YLFSP++G
Sbjct: 1 MKTAQYHIDRLFSLHGRLVARRPVPFLIGSLLVAVILGVGFVFIQAEWDIVYLFSPENGR 60
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
++A + + F NYS F P R T G +
Sbjct: 61 ASQDQAAIRRCFPTNYS-DFLPDRQTNVGNF 90
>gi|432117033|gb|ELK37600.1| Patched domain-containing protein 3 [Myotis davidii]
Length = 955
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
C C++ L R F LG + HP F++VPILLT TGF I+ D E Q+
Sbjct: 257 CQTNCLEAPLSRAFRWLGWEVGSHPWVFLLVPILLTTALSTGF--IYLPKDEEEDLEEQY 314
Query: 172 GP----GKTERAIVEQYFKMNYSARFNPTRIT 199
P K ER V+++F N S F+ R++
Sbjct: 315 TPVRSLAKGERRFVQEHFTTNDSFHFSIFRMS 346
>gi|348576190|ref|XP_003473870.1| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 1 [Cavia porcellus]
Length = 887
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 128 LGVFIARHPGYFIIVPILLTIIC-ITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFK 186
LGV + RHP F+ VP +LTI C ++ +R E D E L +P H K ER++ F
Sbjct: 17 LGVCVGRHPVLFLTVPAVLTIACGLSALRRFQPEGDLERLVAPSHSLAKIERSLAGSLFP 76
Query: 187 MNYSARFNPTRITRPGRY 204
++ S + + PGRY
Sbjct: 77 LDQSKSQLYSDLHTPGRY 94
>gi|431838294|gb|ELK00226.1| Patched domain-containing protein 1 [Pteropus alecto]
Length = 219
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ +R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALKRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|392342258|ref|XP_001067914.3| PREDICTED: patched domain-containing protein 4-like [Rattus
norvegicus]
gi|392350634|ref|XP_236961.5| PREDICTED: patched domain-containing protein 4-like [Rattus
norvegicus]
Length = 904
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQTESDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|348576192|ref|XP_003473871.1| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 2 [Cavia porcellus]
Length = 829
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 128 LGVFIARHPGYFIIVPILLTIIC-ITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFK 186
LGV + RHP F+ VP +LTI C ++ +R E D E L +P H K ER++ F
Sbjct: 17 LGVCVGRHPVLFLTVPAVLTIACGLSALRRFQPEGDLERLVAPSHSLAKIERSLAGSLFP 76
Query: 187 MNYSARFNPTRITRPGRY 204
++ S + + PGRY
Sbjct: 77 LDQSKSQLYSDLHTPGRY 94
>gi|348503562|ref|XP_003439333.1| PREDICTED: patched domain-containing protein 3-like [Oreochromis
niloticus]
Length = 852
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDP--EYLFSPQHGP 173
C+ L RLF LG + +P YF IVP+LL+ GF + D E F+P GP
Sbjct: 8 CLTKPLSRLFENLGSKVGSYPLYFFIVPVLLSAALSGGFIFLQERQDNGLERQFTPSKGP 67
Query: 174 GKTERAIVEQYFKMNYS 190
K RA V++ F NYS
Sbjct: 68 SKATRAFVKENFPYNYS 84
>gi|156120933|ref|NP_001095613.1| patched domain-containing protein C6orf138 homolog [Bos taurus]
gi|151554288|gb|AAI49384.1| MGC148542 protein [Bos taurus]
gi|296474431|tpg|DAA16546.1| TPA: hypothetical protein LOC532145 [Bos taurus]
Length = 202
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|363729650|ref|XP_425978.3| PREDICTED: patched domain-containing protein 3-like [Gallus gallus]
Length = 875
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF----EMDPEYLFSPQ 170
CV+ L RLF LG +A P F+++P LL+ GF IF D E F+P
Sbjct: 17 NCVERPLTRLFEALGRVVAACPWPFVLLPPLLSAGLGAGF--IFLPGRQTNDIEGQFTPT 74
Query: 171 HGPGKTERAIVEQYFKMNYSARFNPTRITRPG 202
GP K ER V +YF + S RF+ R+ G
Sbjct: 75 GGPAKAERDFVRRYFPTDDSERFSAERLPTEG 106
>gi|223462669|gb|AAI51167.1| Similar to CG11212-PA [Mus musculus]
Length = 887
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQTEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|257743473|ref|NP_082750.1| patched domain-containing protein 4 [Mus musculus]
Length = 901
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 24 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQTEGDLERLVAPSHSLAKIERS 83
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 84 LASSLFPLDQSKSQLYSDLHTPGRY 108
>gi|269969437|sp|B9EKX1.2|PTHD4_MOUSE RecName: Full=Patched domain-containing protein 4
Length = 904
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQTEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|327274669|ref|XP_003222099.1| PREDICTED: patched domain-containing protein 3-like [Anolis
carolinensis]
Length = 918
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF--EMDPEYLFSP 169
C CV+ L R LG + HP F+++P+ L+ GF + D E F+P
Sbjct: 28 CHTDCVERPLSRALRALGACVGSHPWPFLLLPLALSAALGAGFMHLKAREANDIEAQFTP 87
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GP K ER++V++ F N S RF+ R+T G Y
Sbjct: 88 IGGPAKNERSLVQKDFPTNDSQRFSAQRLTTEGSY 122
>gi|281346673|gb|EFB22257.1| hypothetical protein PANDA_019858 [Ailuropoda melanoleuca]
Length = 659
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF----EMDPEYLF 167
C C++ L R F +LG + HP F++ P++LT TG I+ E + E +
Sbjct: 4 CHTDCLETPLSRTFGRLGWEVGSHPWIFLLAPMVLTAALGTGL--IYLPKDEEENLEEQY 61
Query: 168 SPQHGPGKTERAIVEQYFKMNYSARFNPTR 197
+P P K ER V+ +F N S RF+ +R
Sbjct: 62 TPIGSPAKAERRFVQGHFTANDSYRFSISR 91
>gi|301788418|ref|XP_002929625.1| PREDICTED: patched domain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 984
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF----EMDPEYLF 167
C C++ L R F +LG + HP F++ P++LT TG I+ E + E +
Sbjct: 145 CHTDCLETPLSRTFGRLGWEVGSHPWIFLLAPMVLTAALGTGL--IYLPKDEEENLEEQY 202
Query: 168 SPQHGPGKTERAIVEQYFKMNYSARFNPTR 197
+P P K ER V+ +F N S RF+ +R
Sbjct: 203 TPIGSPAKAERRFVQGHFTANDSYRFSISR 232
>gi|348531792|ref|XP_003453392.1| PREDICTED: patched domain-containing protein 3-like [Oreochromis
niloticus]
Length = 834
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDP----- 163
MA C + C++ L+ F K+G + +P +F+I P++++ +GF +F D
Sbjct: 1 MARCRMDCIEKPLQSFFKKMGESVGSNPWWFLITPLIVSAALGSGF---YFTQDRLSNNI 57
Query: 164 EYLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
E F+P +GP KTER + F + + F+ R T G Y
Sbjct: 58 EEQFTPFNGPAKTERKYFSEMFPED-DSMFSSLRQTTDGNY 97
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILN-LDYVIEEV 59
+LT E+ KE+ +D + N + F D Q ++Y+ ICAK ++ C N IL+ +DY + +
Sbjct: 108 ILTVEMLKEILSLDSKIRNMLVEF--DKQSFKYEGICAKVMEKCNLNIILDIIDYTAKNI 165
Query: 60 ETKALNLTFP 69
+T + LTFP
Sbjct: 166 DT--VTLTFP 173
>gi|395539913|ref|XP_003771908.1| PREDICTED: patched domain-containing protein 3-like [Sarcophilus
harrisii]
Length = 988
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEM----DPEYLFSPQ 170
C++ L RLF LG +AR+P F++ +LL+ TGF +F E D E F+P
Sbjct: 141 NCIEAPLSRLFGGLGRCVARYPWLFLLSSLLLSAGLGTGF--MFLEQRKTDDIEEQFTPV 198
Query: 171 HGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GP K ER++ ++YF N S F+ +R+T G +
Sbjct: 199 GGPAKGERSLAQKYFPTNDSESFSASRLTTEGTF 232
>gi|390465188|ref|XP_002750214.2| PREDICTED: patched domain-containing protein 3 [Callithrix jacchus]
Length = 958
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDP--EYLFSP 169
C + L R F LG + HP F++ ++LT TGF + E + EY ++P
Sbjct: 118 CHTDWLAAPLSRAFQWLGWQVGAHPWIFLLASLMLTAALGTGFLYLPKEEEENLEYHYTP 177
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+P+R + +I
Sbjct: 178 VGSPAKAERLFVQDHFTTNDSYRFSPSRRSTDTNFI 213
>gi|268564420|ref|XP_002639101.1| Hypothetical protein CBG14920 [Caenorhabditis briggsae]
Length = 896
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
CG C++ + F G+ ++++P F+I PIL+T TG + D YL++P
Sbjct: 3 CGFGCLEPKAAKFFHSYGLLVSQYPFIFLISPILVTCFLATGLIGLEPLSDALYLYTPTD 62
Query: 172 GPGKTERAIVE 182
P KTER I+
Sbjct: 63 APSKTERRIIH 73
>gi|444725072|gb|ELW65652.1| hypothetical protein TREES_T100007639 [Tupaia chinensis]
Length = 292
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|301129184|ref|NP_997382.2| patched domain-containing protein 4 isoform 2 [Homo sapiens]
Length = 311
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|76654443|ref|XP_594595.2| PREDICTED: patched domain-containing protein 3 [Bos taurus]
gi|297490681|ref|XP_002698222.1| PREDICTED: patched domain-containing protein 3 [Bos taurus]
gi|296473055|tpg|DAA15170.1| TPA: patched domain containing 3-like [Bos taurus]
Length = 933
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F +LG + HP F+++P+ LT + TG + E D E ++P
Sbjct: 94 CHTNCLEAPLSRAFQRLGRKVGAHPWIFLLLPLALTAVLGTGLMYLPRDGEEDLEEQYTP 153
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTR 197
P K ER V+ +F N S F+ +R
Sbjct: 154 IGSPAKAERRFVQTHFTANDSLIFSISR 181
>gi|34529470|dbj|BAC85703.1| unnamed protein product [Homo sapiens]
gi|187950441|gb|AAI36780.1| C6orf138 protein [Homo sapiens]
Length = 294
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|350586719|ref|XP_001925843.4| PREDICTED: patched domain-containing protein C6orf138-like [Sus
scrofa]
Length = 309
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|281337742|gb|EFB13326.1| hypothetical protein PANDA_007616 [Ailuropoda melanoleuca]
Length = 292
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|431909745|gb|ELK12891.1| Patched domain-containing protein 1 [Pteropus alecto]
Length = 964
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 135 HPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYSARFN 194
HP +F P+L++I+ F R E E+L +PQH K ER +V F +N S
Sbjct: 100 HPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNLVNSLFPVNRSKHRL 159
Query: 195 PTRITRPGRY 204
+ + PGRY
Sbjct: 160 YSDLQTPGRY 169
>gi|301767258|ref|XP_002919062.1| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 2 [Ailuropoda melanoleuca]
Length = 887
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|426353446|ref|XP_004044205.1| PREDICTED: patched domain-containing protein 4 isoform 2 [Gorilla
gorilla gorilla]
Length = 887
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|397526655|ref|XP_003833234.1| PREDICTED: patched domain-containing protein 4 isoform 2 [Pan
paniscus]
Length = 887
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|344264831|ref|XP_003404493.1| PREDICTED: patched domain-containing protein C6orf138-like
[Loxodonta africana]
Length = 846
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPESDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|359320992|ref|XP_003639478.1| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 2 [Canis lupus familiaris]
Length = 887
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|403261949|ref|XP_003923362.1| PREDICTED: patched domain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 881
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 4 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 63
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 64 LASSLFPLDQSKSQLYSDLHTPGRY 88
>gi|338718144|ref|XP_001498463.3| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 1 [Equus caballus]
Length = 887
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|114607703|ref|XP_001146259.1| PREDICTED: patched domain-containing protein 4 isoform 1 [Pan
troglodytes]
Length = 887
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|301607160|ref|XP_002933185.1| PREDICTED: patched domain-containing protein 3-like [Xenopus
(Silurana) tropicalis]
Length = 920
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 107 ISMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL 166
+ M GC C++ L R F LG IAR+P +FI+VP++L+I GF F E +
Sbjct: 1 MKMNGCNTDCLEKPLSRGFGSLGRLIARYPWWFIVVPVVLSIGSGVGF--CFLEQRQIMM 58
Query: 167 FSPQH-GPG---KTERAIVEQYFKMNYSARFNPTRITRPGRY 204
F + PG K E + +F MN + + ++ G +
Sbjct: 59 FENEFPSPGSLLKREGDFIRTHFPMNNTEHLSTRQLYNEGSF 100
>gi|449483073|ref|XP_002192754.2| PREDICTED: patched domain-containing protein 1 [Taeniopygia
guttata]
Length = 880
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 129 GVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFKMN 188
++I H +F+ +P+L++I+ F R E E+L +P H K ER +V+ F +N
Sbjct: 10 ALYITNHRLFFLYLPVLISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVN 69
Query: 189 YSARFNPTRITRPGRY 204
S + + PGRY
Sbjct: 70 RSKHRLYSDLQTPGRY 85
>gi|332210287|ref|XP_003254240.1| PREDICTED: patched domain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 887
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|296198348|ref|XP_002746670.1| PREDICTED: patched domain-containing protein 4 isoform 1
[Callithrix jacchus]
Length = 887
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|402867199|ref|XP_003897754.1| PREDICTED: patched domain-containing protein 4 isoform 2 [Papio
anubis]
Length = 887
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLHTPGRY 94
>gi|257743475|ref|NP_001013754.3| patched domain-containing protein 4 isoform 1 [Homo sapiens]
gi|269849699|sp|Q6ZW05.3|PTHD4_HUMAN RecName: Full=Patched domain-containing protein 4
gi|194387804|dbj|BAG61315.1| unnamed protein product [Homo sapiens]
Length = 846
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|440905504|gb|ELR55877.1| hypothetical protein M91_19111 [Bos grunniens mutus]
Length = 292
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 10 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 69
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 70 LASSLFPLDQSKSQLYSDLYTPGRY 94
>gi|397526653|ref|XP_003833233.1| PREDICTED: patched domain-containing protein 4 isoform 1 [Pan
paniscus]
Length = 846
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|291396331|ref|XP_002714528.1| PREDICTED: PaTched Related family member (ptr-2)-like [Oryctolagus
cuniculus]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|426353444|ref|XP_004044204.1| PREDICTED: patched domain-containing protein 4 isoform 1 [Gorilla
gorilla gorilla]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|355561770|gb|EHH18402.1| hypothetical protein EGK_14984 [Macaca mulatta]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|332824370|ref|XP_527402.3| PREDICTED: patched domain-containing protein 4 isoform 2 [Pan
troglodytes]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|332210285|ref|XP_003254239.1| PREDICTED: patched domain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|301767256|ref|XP_002919061.1| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 1 [Ailuropoda melanoleuca]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|296198350|ref|XP_002746671.1| PREDICTED: patched domain-containing protein 4 isoform 2
[Callithrix jacchus]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|359320990|ref|XP_003639477.1| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 1 [Canis lupus familiaris]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|410959347|ref|XP_003986272.1| PREDICTED: patched domain-containing protein 4 [Felis catus]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 127 KLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYF 185
+LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER++ F
Sbjct: 33 RLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERSLASSLF 92
Query: 186 KMNYSARFNPTRITRPGRY 204
++ S + + PGRY
Sbjct: 93 PLDQSKSQLYSDLHTPGRY 111
>gi|402867197|ref|XP_003897753.1| PREDICTED: patched domain-containing protein 4 isoform 1 [Papio
anubis]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|395534311|ref|XP_003769187.1| PREDICTED: patched domain-containing protein 4, partial
[Sarcophilus harrisii]
Length = 897
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 105 PQISMAGCGLKCVDNTLKRLF----FKLGVFIARHPGYFIIVPILLTII-CITGFQRIFF 159
P S + G + + ++R +LG+ ++RHP +F+ VP +LTII + R
Sbjct: 1 PGASASWIGWRMLRQVIRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTIIFGFSVLNRFQP 60
Query: 160 EMDPEYLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
E D E L +P H K ER++ F ++ S + + PGRY
Sbjct: 61 ESDLERLVAPSHSLAKIERSLAGSLFPLDQSKSQLYSDLHTPGRY 105
>gi|297686231|ref|XP_002820664.1| PREDICTED: patched domain-containing protein 3, partial [Pongo
abelii]
Length = 695
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSP 169
C C++ L R F LG + HP F++ P++LT TGF + E D E ++P
Sbjct: 115 CHTDCLEGPLSRAFQWLGWQVGAHPWIFLLAPLMLTAALGTGFLYLPKDEEEDLEEYYTP 174
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
P K ER V+ +F N S RF+ +R + ++
Sbjct: 175 VGSPAKAERRFVQGHFTTNDSYRFSASRRSTEANFV 210
>gi|395832483|ref|XP_003789300.1| PREDICTED: patched domain-containing protein 4 [Otolemur garnettii]
Length = 846
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 27 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFEPEGDLERLVAPSHSLAKIERS 86
Query: 180 IVEQYFKMNYSARFNPTRITRPGRY 204
+ F ++ S + + PGRY
Sbjct: 87 LASSLFPLDQSKSQLYSDLHTPGRY 111
>gi|391348723|ref|XP_003748593.1| PREDICTED: patched domain-containing protein 3-like [Metaseiulus
occidentalis]
Length = 834
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEM----DPEYLFSPQHGPGKT 176
L +LF++ G IA +P I++ L++I ++ F F+E+ DPEYLF+P H
Sbjct: 12 LSKLFYRFGYSIAENPATGILLS-LISICILSSFA--FYELEYLDDPEYLFAPTHSRSHL 68
Query: 177 ERAIVEQYFKMNYSARFNPTRITR 200
ER V F N S F+ R T+
Sbjct: 69 ERQTVATLFPTNASNNFDVGRATK 92
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILN-LDYVIEEV 59
+LT++ WK+ +D+++ + F E + Y Y +CAK CF N+ L L ++ +
Sbjct: 108 VLTEDTWKDTLQLDQLIRSMMTTFNEKN--YSYHSLCAKDNGKCFSNEFLRPLAGILPSL 165
Query: 60 ETKALNLTFPIR 71
T L +P+
Sbjct: 166 ATGKRRLAYPLE 177
>gi|219518521|gb|AAI45092.1| Unknown (protein for MGC:178647) [Mus musculus]
gi|219520861|gb|AAI71943.1| Unknown (protein for MGC:198648) [Mus musculus]
Length = 461
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F + G + +P F++ P LLT TG IF + E L ++
Sbjct: 71 CHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTGL--IFLPKEKENLEEQYT 128
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRIT 199
P P K ER V+ +F N + RF+ +R +
Sbjct: 129 PIGSPAKAERRFVQGHFSTNDTYRFSASRTS 159
>gi|405952088|gb|EKC19938.1| Patched domain-containing protein 3 [Crassostrea gigas]
Length = 2699
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 107 ISMAGCGLKC------------VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGF 154
I + GC L C + + R+F K GVF++++P +I+ +L I+ G
Sbjct: 751 IVVLGCLLHCHRRGRKMGCYSRYEEGVSRIFAKYGVFVSKYPWQILILALLTNILLGIGL 810
Query: 155 QRIFFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYSARFNP 195
R+ E E L++P + +R F++NY F+P
Sbjct: 811 MRLESEGSTEVLYTPMNSQASKDREKARGLFELNYEENFDP 851
>gi|126310183|ref|XP_001369258.1| PREDICTED: patched domain-containing protein C6orf138 homolog
[Monodelphis domestica]
Length = 950
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 105 PQISMAGCGLKCVDNTLKRLF----FKLGVFIARHPGYFIIVPILLTII-CITGFQRIFF 159
P S + G + + ++R +LG+ ++RHP +F+ VP +LTII + R
Sbjct: 54 PGASASWIGWRMLRQVIRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTIIFGFSVLNRFQP 113
Query: 160 EMDPEYLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
E D E L +P H K ER++ F ++ S + + PGRY
Sbjct: 114 ESDLERLVAPSHSLAKIERSLAGSLFPLDQSKSQLYSDLHTPGRY 158
>gi|12856242|dbj|BAB30614.1| unnamed protein product [Mus musculus]
Length = 410
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F + G + +P F++ P LLT TG IF + E L ++
Sbjct: 71 CHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTGL--IFLPKEKENLEEQYT 128
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRIT 199
P P K ER V+ +F N + RF+ +R +
Sbjct: 129 PIGSPAKAERRFVQGHFSTNDTYRFSASRTS 159
>gi|260792826|ref|XP_002591415.1| hypothetical protein BRAFLDRAFT_69978 [Branchiostoma floridae]
gi|229276620|gb|EEN47426.1| hypothetical protein BRAFLDRAFT_69978 [Branchiostoma floridae]
Length = 871
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L + + GVF+ARHP ++V +LL + G + E D YLFSP HG + E+A
Sbjct: 9 LGEYYSRYGVFLARHPAAVLVVSLLLVAALLPGLAFLQVEEDVFYLFSPLHGRWREEKAA 68
Query: 181 VEQYFKMNYSARFNPTRITRPGR 203
VE++F + F+PTR+T R
Sbjct: 69 VERHFPSD-ERDFDPTRLTSLAR 90
>gi|148702905|gb|EDL34852.1| mCG12367, isoform CRA_b [Mus musculus]
Length = 734
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F + G + +P F++ P LLT TG IF + E L ++
Sbjct: 76 CHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTGL--IFLPKEKENLEEQYT 133
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRIT 199
P P K ER V+ +F N + RF+ +R +
Sbjct: 134 PIGSPAKAERRFVQGHFSTNDTYRFSASRTS 164
>gi|426250395|ref|XP_004018922.1| PREDICTED: LOW QUALITY PROTEIN: patched domain-containing protein 4
[Ovis aries]
Length = 834
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 123 RLFFKLGVFIARHPGYFIIVPILLTI-ICITGFQRIFFEMDPEYLFSPQHGPGKTERAIV 181
R+ + G+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER++
Sbjct: 17 RMLRQXGLCVSRHPVFFLTVPAVLTITFGLSALNRFQPEGDLERLVAPSHSLAKIERSLA 76
Query: 182 EQYFKMNYSARFNPTRITRPGRY 204
F ++ S + + PGRY
Sbjct: 77 SSLFPLDQSKSQLYSDLHTPGRY 99
>gi|345323147|ref|XP_001512040.2| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 1 [Ornithorhynchus anatinus]
Length = 887
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITG-FQRIFFEMDPEYLFSPQHGP 173
+ V L+ ++LG+ ++RHP +F+ VP +LTI G R E D E L +P H
Sbjct: 4 QVVRRGLRWFCYRLGLCVSRHPVFFLTVPAVLTIASGFGALHRFQPEGDLERLVAPSHSL 63
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGR+
Sbjct: 64 AKIERSLAGSLFPLDLSKSQLYSDLHAPGRF 94
>gi|12853786|dbj|BAB29848.1| unnamed protein product [Mus musculus]
Length = 729
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F + G + +P F++ P LLT TG IF + E L ++
Sbjct: 71 CHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTGL--IFLPKEKENLEEQYT 128
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRIT 199
P P K ER V+ +F N + RF+ +R +
Sbjct: 129 PIGSPAKAERRFVQGHFSTNDTYRFSASRTS 159
>gi|345323149|ref|XP_003430680.1| PREDICTED: patched domain-containing protein C6orf138 homolog
isoform 2 [Ornithorhynchus anatinus]
Length = 848
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITG-FQRIFFEMDPEYLFSPQHGP 173
+ V L+ ++LG+ ++RHP +F+ VP +LTI G R E D E L +P H
Sbjct: 23 QVVRRGLRWFCYRLGLCVSRHPVFFLTVPAVLTIASGFGALHRFQPEGDLERLVAPSHSL 82
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGR+
Sbjct: 83 AKIERSLAGSLFPLDLSKSQLYSDLHAPGRF 113
>gi|25147620|ref|NP_509013.2| Protein PTR-4 [Caenorhabditis elegans]
gi|351049761|emb|CCD63815.1| Protein PTR-4 [Caenorhabditis elegans]
Length = 960
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPG 174
K ++ ++++FFK G+F+A+H +F+IVP+ LT++ I G + +D LF P P
Sbjct: 8 KQFEDWMQKVFFKYGIFVAKHQFWFLIVPLALTVLSIPGLFYLQINLDLYRLFVPTDAPV 67
Query: 175 KTE 177
+ E
Sbjct: 68 RYE 70
>gi|327261173|ref|XP_003215406.1| PREDICTED: patched domain-containing protein C6orf138-like [Anolis
carolinensis]
Length = 863
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGP 173
+ + L+ +LG+F++RHP +F+ VP +LT+I + R E D E L +P H
Sbjct: 38 QAIHRGLQSFCRQLGLFVSRHPVFFLTVPAVLTLIFGSSALHRFQLERDLERLVAPSHSL 97
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER + F ++ + + + PGR+
Sbjct: 98 AKIERRLAGSLFPLDRAKGQLYSDLHPPGRF 128
>gi|260837015|ref|XP_002613501.1| hypothetical protein BRAFLDRAFT_71889 [Branchiostoma floridae]
gi|229298886|gb|EEN69510.1| hypothetical protein BRAFLDRAFT_71889 [Branchiostoma floridae]
Length = 734
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+K L RLF G +A P F+I +L+T I GF I E + YLFSP++G
Sbjct: 1 MKTAQYRLDRLFGLHGRLVASTPVPFLIGSVLVTGILGFGFMFIQAEWNIVYLFSPENGR 60
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
++A V + F NYS F P R T G +
Sbjct: 61 ASQDQAAVSRCFPANYS-DFVPDRQTNVGNF 90
>gi|148691443|gb|EDL23390.1| mCG54124 [Mus musculus]
Length = 208
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII-CITGFQRIFFEMDPEYLFSPQHGPGKTERA 179
L+ +LG+ ++RHP +F+ VP +LTI ++ R E D E L +P H K ER+
Sbjct: 115 LQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNRFQTEGDLERLVAPSHSLAKIERS 174
Query: 180 IVEQYFKMNYSARFNPTRITRPGR 203
+ F ++ S + + PGR
Sbjct: 175 LASSLFPLDQSKSQLYSDLHTPGR 198
>gi|326667473|ref|XP_003198605.1| PREDICTED: patched domain-containing protein 3 [Danio rerio]
Length = 869
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE----MDPEYLF 167
C C++ L +F KLG I RHP FI++ + + GF IF + D E F
Sbjct: 3 CKTDCIERPLSLVFEKLGRLIGRHPVVFILLSLYVAAGLGAGF--IFLKEREANDIEDQF 60
Query: 168 SPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
+P +GP K +R IV ++F S F+ R+ G Y
Sbjct: 61 TPVNGPAKRDREIVAEHFPP--SDEFSQLRLMSEGTY 95
>gi|148702904|gb|EDL34851.1| mCG12367, isoform CRA_a [Mus musculus]
Length = 869
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F + G + +P F++ P LLT TG IF + E L ++
Sbjct: 71 CHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTGL--IFLPKEKENLEEQYT 128
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P P K ER V+ +F N + RF+ +R + +
Sbjct: 129 PIGSPAKAERRFVQGHFSTNDTYRFSASRTSSETNF 164
>gi|260787924|ref|XP_002589001.1| hypothetical protein BRAFLDRAFT_87473 [Branchiostoma floridae]
gi|229274174|gb|EEN45012.1| hypothetical protein BRAFLDRAFT_87473 [Branchiostoma floridae]
Length = 1501
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 119 NTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDP--EYLFSPQHGPGKT 176
N K LFF + +F H F+ L + G F D E L++P++G GKT
Sbjct: 698 NYFKILFFTI-LFSFMHAFLFLPGCFYLELFGGLGAGMYFMASDSSVEGLYTPENGRGKT 756
Query: 177 ERAIVEQYFKMNYSARFNPTRITRPGR 203
ERA+V+Q+F +N S F +RI GR
Sbjct: 757 ERAVVQQHFPLNDSEAFQASRIITNGR 783
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+K L RLF G + P F+I L+ I GF I E D YLFSP++G
Sbjct: 1 MKTAQYHLDRLFGLHGRLMGSKPIPFLIGSFLVASILGVGFVFIQAEWDIVYLFSPENGR 60
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
++A V + F NYS F P R T G +
Sbjct: 61 ASQDQAAVSRCFPTNYS-DFVPNRQTNVGNF 90
>gi|341890479|gb|EGT46414.1| CBN-PTR-10 protein [Caenorhabditis brenneri]
Length = 850
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 113 GLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHG 172
G C++ + F G+ ++ +P F+I PIL+T + TG + D YL++P
Sbjct: 4 GFGCLEPKAAKFFHSYGLLVSGYPFIFLISPILITGLLTTGLIGLEPLSDALYLYTPTDA 63
Query: 173 PGKTERAIV 181
P KTER I+
Sbjct: 64 PSKTERRII 72
>gi|226442984|ref|NP_083325.1| patched domain-containing protein 3 [Mus musculus]
gi|123778281|sp|Q0EEE2.1|PTHD3_MOUSE RecName: Full=Patched domain-containing protein 3; AltName:
Full=RND-type protein RNDEu-3
gi|114841689|dbj|BAF32146.1| RNDEu-3 [Mus musculus]
Length = 906
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYL---FS 168
C C++ L R F + G + +P F++ P LLT TG IF + E L ++
Sbjct: 71 CHTNCLEAPLSRGFQRFGATVGANPWLFLLGPALLTASLGTGL--IFLPKEKENLEEQYT 128
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
P P K ER V+ +F N + RF+ +R + +
Sbjct: 129 PIGSPAKAERRFVQGHFSTNDTYRFSASRTSSETNF 164
>gi|341883132|gb|EGT39067.1| hypothetical protein CAEBREN_26256 [Caenorhabditis brenneri]
Length = 848
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 113 GLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHG 172
G C++ + F G+ ++ +P F+I PIL+T + TG + D YL++P
Sbjct: 4 GFGCLEPKAAKFFHSYGLLVSGYPFIFLISPILITGLLTTGLIGLEPLSDALYLYTPTDA 63
Query: 173 PGKTERAIV 181
P KTER I+
Sbjct: 64 PSKTERRII 72
>gi|56207719|emb|CAI21193.1| novel protein [Danio rerio]
Length = 827
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE----MDPEYLF 167
C C++ L +F KLG I RHP FI++ + + GF IF + D E F
Sbjct: 3 CKTDCIERPLSLVFEKLGRLIGRHPVVFILLSLYVAAGLGAGF--IFLKEREANDIEDQF 60
Query: 168 SPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
+P +GP K +R IV ++F S F+ R+ G Y
Sbjct: 61 TPVNGPAKRDREIVAEHFPP--SDEFSQLRLMSEGTY 95
>gi|326680681|ref|XP_002667290.2| PREDICTED: patched domain-containing protein 3-like, partial [Danio
rerio]
Length = 642
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF--EMDPEYL 166
M C C++ ++R F LG F+ HP +F+++P++++ GF FF E+ + +
Sbjct: 1 MTSCTTDCIEKPIRRCFESLGKFVGLHPWWFVVLPLVMSAGLGGGF---FFLNELKSDDI 57
Query: 167 ---FSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
F+P+ G K ER ++ F + ++F+ RI G +
Sbjct: 58 VEQFTPKKGRAKMERRFFQETFPQS-DSQFSVIRINTDGVF 97
>gi|410924890|ref|XP_003975914.1| PREDICTED: patched domain-containing protein 3-like [Takifugu
rubripes]
Length = 835
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE----MDPE 164
M G C++ L+ F +G + HP +F++ P+LL+ +GF F E D E
Sbjct: 1 MVRLGSDCLEKRLRLCFEVMGHLVGSHPWWFLVAPLLLSTGLGSGF--YFLEDRLANDIE 58
Query: 165 YLFSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
F+P G K ER + + F N S F+ R++ G Y
Sbjct: 59 EQFTPVDGQAKEERRYIRETFPGNESL-FSRLRLSTSGTY 97
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+LT E + + +D V S+V +Q + Y+D+CA + SC PNDIL++
Sbjct: 108 VLTAEALQNIAELDSEVR--SMVVHHGNQSFAYEDLCAGALGSCAPNDILDVTV------ 159
Query: 61 TKALNLTFP 69
+NL FP
Sbjct: 160 GNRVNLMFP 168
>gi|308498287|ref|XP_003111330.1| CRE-PTR-10 protein [Caenorhabditis remanei]
gi|308240878|gb|EFO84830.1| CRE-PTR-10 protein [Caenorhabditis remanei]
Length = 898
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 113 GLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHG 172
G C++ + F G+ ++ +P F+I PIL+T TG + D YL++P
Sbjct: 4 GFGCLEPKAAKFFHSYGLLVSGYPFIFLISPILVTCFLATGLIGLEPLSDALYLYTPTDA 63
Query: 173 PGKTERAIVE 182
P KTER I+
Sbjct: 64 PSKTERRIIH 73
>gi|402579809|gb|EJW73760.1| hypothetical protein WUBG_15334 [Wuchereria bancrofti]
Length = 178
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE--MDPEYLFSPQHGPGK 175
DN +++LF++ G R I PILLTI GF I + +DPEY+FSP++ +
Sbjct: 6 DNLIQQLFYRWGSIAYRFRFILFIGPILLTIALSFGFLFIKKQTTIDPEYVFSPKNAQWR 65
Query: 176 TERAIVEQYFKMN 188
E+ ++ Y+ +N
Sbjct: 66 YEKKVLSDYWPLN 78
>gi|170582592|ref|XP_001896198.1| protein C24B5.3 [Brugia malayi]
gi|158596640|gb|EDP34952.1| protein C24B5.3 , putative [Brugia malayi]
Length = 959
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE--MDPEYLFSPQHGPGK 175
DN +++LF++ G R I PILLTI GF I + +DPEY+FSP++ +
Sbjct: 5 DNIIQQLFYRWGSIAYRFRFILFIGPILLTIALSFGFLFIKRQTTIDPEYVFSPKNAQWR 64
Query: 176 TERAIVEQYFKMN 188
E+ ++ Y+ +N
Sbjct: 65 YEKKVLSDYWPLN 77
>gi|324513952|gb|ADY45708.1| Patched domain-containing protein 3, partial [Ascaris suum]
Length = 489
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE----MDPEYLFSPQHGP 173
D + R+FF+ G+ R I PIL TI GF IF + +DP+Y+FSP P
Sbjct: 7 DCLIHRIFFQWGLLAYRFRLALFISPILFTIFLSIGF--IFIKQQTTIDPQYVFSPISAP 64
Query: 174 GKTERAIVEQYFKMN 188
+ ER ++ Q++ +N
Sbjct: 65 WRYERDVLSQHWPLN 79
>gi|317420123|emb|CBN82159.1| Patched domain-containing protein 3 [Dicentrarchus labrax]
Length = 852
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEY--L 166
MA C+ L F KLG + +P YF +VP++L+ GF + D ++
Sbjct: 1 MASRRTDCLAKPLSGFFEKLGSLVGSYPFYFFVVPLILSAALGGGFTFLKDREDNDFERQ 60
Query: 167 FSPQHGPGKTERAIVEQYFKMNYS 190
F+P+ GP K RA V++ F N S
Sbjct: 61 FTPRKGPSKATRAFVKENFPYNDS 84
>gi|223995253|ref|XP_002287310.1| niemann-pick C type protein-like protein [Thalassiosira pseudonana
CCMP1335]
gi|220976426|gb|EED94753.1| niemann-pick C type protein-like protein [Thalassiosira pseudonana
CCMP1335]
Length = 153
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
VD+++ LF++LG+F P I + + ++I+C G ++ E P+ L+ PQ+ +
Sbjct: 25 VDSSISGLFYRLGLFCNGRPKTTIGIALAVSILCAMGMAKLNTENRPDKLWVPQNTEAEV 84
Query: 177 ERAIVEQYFKMNYSARF 193
E+ YF N +RF
Sbjct: 85 EQKQFLSYFPAN--SRF 99
>gi|71987225|ref|NP_491658.2| Protein PTR-10 [Caenorhabditis elegans]
gi|351063668|emb|CCD71882.1| Protein PTR-10 [Caenorhabditis elegans]
Length = 900
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 113 GLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHG 172
G C++ + F G+ ++ +P F++ PIL+T TG + D YL++P
Sbjct: 4 GFGCLEPKAAKFFHSYGLLVSGYPFIFLVSPILVTCFLATGLIGLEPLSDALYLYTPTDA 63
Query: 173 PGKTERAIVE 182
P KTER I+
Sbjct: 64 PSKTERRIIH 73
>gi|268532418|ref|XP_002631337.1| C. briggsae CBR-PTR-20 protein [Caenorhabditis briggsae]
Length = 860
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+R F G ++AR P +FI+VP LLTI+ GF + D +++P +G + E A
Sbjct: 4 LERFFDGYGQYVARKPFFFILVPALLTIVSTFGFLSFSTQDDIWDIYAPTNGLSRVEEAG 63
Query: 181 VEQY 184
++++
Sbjct: 64 IKRF 67
>gi|312076094|ref|XP_003140707.1| hypothetical protein LOAG_05122 [Loa loa]
gi|307764126|gb|EFO23360.1| hypothetical protein LOAG_05122 [Loa loa]
Length = 936
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE----MDPEYLFSPQHGP 173
DN +++LF++ G R I PILLTI GF +F + +DPEY+FSP++
Sbjct: 5 DNLIQQLFYRWGSIAYRWRLILFIGPILLTIAL--GFGFLFIKEQTTIDPEYVFSPENAQ 62
Query: 174 GKTERAIVEQYFKMN 188
+ E+ ++ +++ +N
Sbjct: 63 WRYEKKVLSEHWPLN 77
>gi|224044751|ref|XP_002189808.1| PREDICTED: patched domain-containing protein 3 [Taeniopygia
guttata]
Length = 851
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF----EMDPEYLFSPQ 170
CV+ L+RLF L +A P F++VP+LL+ GF +F D E F+P
Sbjct: 17 NCVERPLRRLFEGLASGVAACPWPFVLVPLLLSGGLGAGF--VFLPQRQANDIEEQFTPT 74
Query: 171 HGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GP K ER V ++F + S RF+ R+ G Y
Sbjct: 75 WGPAKAERDFVRRHFPTDDSERFSAPRLPTEGAY 108
>gi|308512001|ref|XP_003118183.1| CRE-PTR-4 protein [Caenorhabditis remanei]
gi|308238829|gb|EFO82781.1| CRE-PTR-4 protein [Caenorhabditis remanei]
Length = 956
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPG 174
K ++ + ++F+ G+FIA+H +F+I P++LT+I I G + +D LF P P
Sbjct: 8 KQFEDWMVKVFYNYGLFIAKHQRWFLITPLVLTLISIGGLFYLQINLDLYRLFVPTDAPV 67
Query: 175 KTE 177
+ E
Sbjct: 68 RLE 70
>gi|341881129|gb|EGT37064.1| CBN-PTR-20 protein [Caenorhabditis brenneri]
Length = 860
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+R F G ++AR P +FI+VP LLTII GF + D +++P +G + E A
Sbjct: 4 LERFFDWYGQYVARKPFFFILVPALLTIISTYGFLSFHTQDDIWDIYAPTNGLSRVEEAG 63
Query: 181 VEQY 184
++++
Sbjct: 64 IKRF 67
>gi|426240607|ref|XP_004014189.1| PREDICTED: patched domain-containing protein 3-like [Ovis aries]
Length = 985
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSPQHGPGKTER 178
L R F +LG + HP F+++P+ LT + TG + + D E ++P P K ER
Sbjct: 159 LSRAFQRLGRKVGAHPWVFLLLPVALTAVLGTGLMYLPRDGDEDLEEQYTPIGSPAKAER 218
Query: 179 AIVEQYFKMNYSARFNPTR 197
V+ +F N S F+ +R
Sbjct: 219 RFVQGHFTANDSLVFSVSR 237
>gi|260807176|ref|XP_002598385.1| hypothetical protein BRAFLDRAFT_232417 [Branchiostoma floridae]
gi|229283657|gb|EEN54397.1| hypothetical protein BRAFLDRAFT_232417 [Branchiostoma floridae]
Length = 836
Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+K + RLF G +A P ++I L+ I GF I E D YLFSP +G
Sbjct: 1 MKTAQYHIDRLFSLHGRLVASKPIPYLIGSFLVAGILGVGFVFIQAEWDIVYLFSPVNGR 60
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
++A V + F NYS F P R T G +
Sbjct: 61 ASQDQAAVSRCFPANYS-DFVPNRHTNVGNF 90
>gi|324504245|gb|ADY41833.1| Patched-related protein 9 [Ascaris suum]
Length = 879
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
+ + +++ F LG + R+ F +P+ +T G R E YL+SP + P
Sbjct: 8 ISHQIQKFFHHLGFLVHRYTALFFYIPLFITAFSTIGLARFNEENRVWYLYSPSNAPSHL 67
Query: 177 ERAIVEQYFK 186
E AI ++F
Sbjct: 68 EHAIANEFFN 77
>gi|17535391|ref|NP_497114.1| Protein PTR-20 [Caenorhabditis elegans]
gi|6434552|emb|CAB61102.1| Protein PTR-20 [Caenorhabditis elegans]
Length = 860
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+R F G F+AR P +FI++P LLTI+ GF + D +++P +G + E A
Sbjct: 4 LERFFDWYGQFVARKPFFFILIPSLLTILSTYGFLSFHTQDDIWDIYAPTNGLSRVEEAG 63
Query: 181 VEQY 184
++++
Sbjct: 64 IKRF 67
>gi|326434043|gb|EGD79613.1| hypothetical protein PTSG_10460 [Salpingoeca sp. ATCC 50818]
Length = 933
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQ-RIFF-----EMDPEYLFSPQ 170
++ ++ ++ L IA HP F+IVP ++ + GF RIF E DPE L++PQ
Sbjct: 28 IEKSISHFYYTLAHHIADHPWVFVIVPAII----LLGFGVRIFADPVSPEQDPEDLYTPQ 83
Query: 171 HGPGKTERAIVEQYF 185
+R +VE+ F
Sbjct: 84 DSVAFAQRIVVEESF 98
>gi|330922582|ref|XP_003299891.1| hypothetical protein PTT_10991 [Pyrenophora teres f. teres 0-1]
gi|311326236|gb|EFQ92015.1| hypothetical protein PTT_10991 [Pyrenophora teres f. teres 0-1]
Length = 382
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 5 EIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDY 54
++W ELR + ++++N +VFG++DQ Y + D AK CF D L +++
Sbjct: 122 DMWSELRTLKKMLNNEGVVFGQEDQRYSFGDFSAKLRRLCFAYDTLWVEW 171
>gi|260785830|ref|XP_002587963.1| hypothetical protein BRAFLDRAFT_87358 [Branchiostoma floridae]
gi|229273118|gb|EEN43974.1| hypothetical protein BRAFLDRAFT_87358 [Branchiostoma floridae]
Length = 752
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C++ LK F G F+ RH +F++ P+ ++ + G + + D + LFSP + P +
Sbjct: 5 CIEKNLKTWFGFFGCFVYRHEVFFLVAPLCVSGLLGAGLSHVRTDSDIDSLFSPYNAPAR 64
Query: 176 TERAIVEQYFKM 187
T ++ + ++
Sbjct: 65 TNDSLHDHVSRL 76
>gi|341899454|gb|EGT55389.1| hypothetical protein CAEBREN_15250 [Caenorhabditis brenneri]
Length = 905
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 123 RLFFKL-GVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIV 181
R FF+ GV + RHP F +P+ L+ + + G R + E YL+SP+ E A+
Sbjct: 13 RQFFRWTGVQVYRHPAPFFWIPVTLSFLAVLGLLRFYEENRIWYLYSPEKADSHFEHAVA 72
Query: 182 EQYFK 186
++F
Sbjct: 73 NEFFN 77
>gi|341888206|gb|EGT44141.1| hypothetical protein CAEBREN_20242 [Caenorhabditis brenneri]
Length = 905
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 123 RLFFKL-GVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIV 181
R FF+ GV + RHP F +P+ L+ + + G R + E YL+SP+ E A+
Sbjct: 13 RQFFRWTGVQVYRHPAPFFWIPVTLSFLAVLGLLRFYEENRIWYLYSPEKADSHFEHAVA 72
Query: 182 EQYFK 186
++F
Sbjct: 73 NEFFN 77
>gi|308468439|ref|XP_003096462.1| CRE-PTR-1 protein [Caenorhabditis remanei]
gi|308243049|gb|EFO87001.1| CRE-PTR-1 protein [Caenorhabditis remanei]
Length = 986
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEM---DPEYLFSPQHGPG 174
D+ + +F+++GV + + YF+++ + C GF F E DP+Y+FSP + P
Sbjct: 5 DDKIHEVFYEVGVNVHKFRLYFLLLSFAILTFCSFGFLW-FTEQTTNDPQYVFSPANAPW 63
Query: 175 KTERAIVEQYFKMNYSARFNPTR 197
+ ERA++ +++ ++ +F P +
Sbjct: 64 RYERAVLTEHWPLD-EEKFWPGK 85
>gi|308488668|ref|XP_003106528.1| hypothetical protein CRE_15922 [Caenorhabditis remanei]
gi|308253878|gb|EFO97830.1| hypothetical protein CRE_15922 [Caenorhabditis remanei]
Length = 102
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 123 RLFFKL-GVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIV 181
R FF+ GV + RHP F +P+ L+ + + G R + E YL+SP+ E A+
Sbjct: 13 RQFFRWTGVQVYRHPAPFFWIPVTLSFLAVLGLLRFYEENRIWYLYSPEKADSHFEHAVA 72
Query: 182 EQYF 185
++F
Sbjct: 73 NEFF 76
>gi|302797583|ref|XP_002980552.1| hypothetical protein SELMODRAFT_112989 [Selaginella moellendorffii]
gi|300151558|gb|EFJ18203.1| hypothetical protein SELMODRAFT_112989 [Selaginella moellendorffii]
Length = 1226
Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
++ L R F G +IARHPG +++ IL+TII G ++ E +PE L+ T
Sbjct: 318 LEKFLSRWFRSQGTWIARHPGVVLLLSILVTIILCIGLVKMNVETNPENLWVSPGSAAAT 377
Query: 177 ER 178
E+
Sbjct: 378 EK 379
>gi|302790111|ref|XP_002976823.1| hypothetical protein SELMODRAFT_106036 [Selaginella moellendorffii]
gi|300155301|gb|EFJ21933.1| hypothetical protein SELMODRAFT_106036 [Selaginella moellendorffii]
Length = 1225
Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
++ L R F G +IARHPG +++ IL+TII G ++ E +PE L+ T
Sbjct: 318 LEKFLSRWFRSQGTWIARHPGVVLLLSILVTIILCIGLVKMNVETNPENLWVSPGSAAAT 377
Query: 177 ER 178
E+
Sbjct: 378 EK 379
>gi|268559018|ref|XP_002637500.1| C. briggsae CBR-PTR-1 protein [Caenorhabditis briggsae]
Length = 951
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEM----DPEYLFSPQHGP 173
D+ + +F+ +GV + + YF+++ I+ F ++FE DP+Y+FSP + P
Sbjct: 5 DDKIHEVFYNVGVRVHKFRLYFLLLS--FAILTFASFGFLWFEKQTTRDPQYVFSPANAP 62
Query: 174 GKTERAIVEQYFKMNYSARFNPTR 197
+ ERA++ +++ ++ +F P +
Sbjct: 63 WRYERAVLTEHWPLD-EEKFWPGK 85
>gi|297678302|ref|XP_002817017.1| PREDICTED: LOW QUALITY PROTEIN: patched domain-containing protein 4
[Pongo abelii]
Length = 837
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTII----CITGFQRIFFEMDPEY--LFSPQHGPG 174
L+ + +LG+ ++ HP +F+ VP +LTI + FQ E D E+ L +P H
Sbjct: 16 LQSIGHRLGLCVSPHPVFFLTVPAILTITFGLSLLNHFQS---EGDREHLRLVAPSHSMA 72
Query: 175 KTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER++ F ++ S + + PGRY
Sbjct: 73 KIERSLASSLFPLDQSKSQLYSDLHTPGRY 102
>gi|308509946|ref|XP_003117156.1| CRE-PTR-20 protein [Caenorhabditis remanei]
gi|308242070|gb|EFO86022.1| CRE-PTR-20 protein [Caenorhabditis remanei]
Length = 860
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L++ F G ++AR P +FI+VP LLTI+ GF + D +++P +G + E A
Sbjct: 4 LEKFFDWYGQYVARKPFFFILVPALLTIVSTYGFLSFSTQDDIWDIYAPTNGLSRVEEAG 63
Query: 181 VEQY 184
+ ++
Sbjct: 64 IRRF 67
>gi|260821356|ref|XP_002605999.1| hypothetical protein BRAFLDRAFT_239687 [Branchiostoma floridae]
gi|229291336|gb|EEN62009.1| hypothetical protein BRAFLDRAFT_239687 [Branchiostoma floridae]
Length = 840
Score = 43.5 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLT-IICITGFQRIFFEMDPEYLFSPQHGPGK 175
+D+ L+R+F+ +G +A P FI++P++ + ++ G ++ D EYLF+P++ +
Sbjct: 6 IDDKLRRMFYHVGRAVAFLPAPFILLPLIASGLLGYFGISKLAISDDLEYLFTPENNQAR 65
Query: 176 TERAIVE 182
+R +E
Sbjct: 66 LDRDAME 72
>gi|17562810|ref|NP_504760.1| Protein PTR-15 [Caenorhabditis elegans]
gi|351058786|emb|CCD66561.1| Protein PTR-15 [Caenorhabditis elegans]
Length = 840
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L LF++ G+FI P +F + P++LTII G + E D +L+SP+H + E +
Sbjct: 16 LAHLFYQYGLFIYDRPRFFTLGPLILTIIFSFGILNMRTEDDLRFLYSPEHSLSREEYQV 75
Query: 181 VEQY 184
+ +
Sbjct: 76 HKDF 79
>gi|195996593|ref|XP_002108165.1| hypothetical protein TRIADDRAFT_52362 [Trichoplax adhaerens]
gi|190588941|gb|EDV28963.1| hypothetical protein TRIADDRAFT_52362 [Trichoplax adhaerens]
Length = 978
Score = 42.7 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ LF+++G+ I RHP + ++ I+ C GF R E E L+ P
Sbjct: 50 LETLFYRIGLLIGRHPYHVVVTSIVCVAFCSLGFLRFTEENRIEKLWVPSTADSLVHMEW 109
Query: 181 VEQYFKMNY 189
V++ F NY
Sbjct: 110 VDKNFPSNY 118
>gi|268560818|ref|XP_002646298.1| Hypothetical protein CBG12004 [Caenorhabditis briggsae]
Length = 933
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CV+ LF +LG F+ HP FI+ P+L T G + D YLF+P K
Sbjct: 5 CVERRAASLFRQLGFFVCDHPLPFIVFPLLFTTAMGVGLLHLNPLSDAVYLFTPIGAQSK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRYI 205
ER + + + + + P R R I
Sbjct: 65 MERMSIHEKWPLT-DNNYIPGRAVTQSREI 93
>gi|17562808|ref|NP_505380.1| Protein PTR-1 [Caenorhabditis elegans]
gi|373253790|emb|CCD61428.1| Protein PTR-1 [Caenorhabditis elegans]
Length = 956
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFE----MDPEYLFSP 169
+ D+ + ++FF++G + + YF+++ I+ + F ++F DP+Y+FSP
Sbjct: 1 MSWFDDKIHKVFFRVGENVHKFRLYFLLLS--FAILTFSAFGFLWFTEQTTNDPQYVFSP 58
Query: 170 QHGPGKTERAIVEQYFKMNYSARFNPTR 197
+ P + ERA++ +++ ++ +F P +
Sbjct: 59 ANAPWRYERAVLTEHWPLD-EEKFWPGK 85
>gi|324503976|gb|ADY41716.1| Patched domain-containing protein 3 [Ascaris suum]
Length = 860
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
+ + L +F++ ++++ +P FI+VP+LLT G + D +L+SP H P +
Sbjct: 31 LQDVLAAIFYRYALYVSSNPRPFIVVPVLLTFALSLGVFTFTVQDDLRFLYSPIHSPARF 90
Query: 177 ERAI 180
E +I
Sbjct: 91 EYSI 94
>gi|395827448|ref|XP_003786914.1| PREDICTED: patched domain-containing protein 3 [Otolemur garnettii]
Length = 991
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITG--FQRIFFEMDPEYLFSPQHGP 173
C++ L R F +LG + HP F+++P+LLT TG + + + D E ++P GP
Sbjct: 158 CLEAPLSRAFGRLGWEVGAHPWLFLLLPMLLTAALGTGLYYLPVGKDEDLEEQYTPIGGP 217
Query: 174 GKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
K ER+ V ++F N S F +RI+ +
Sbjct: 218 AKAERSFVREHFTTNDSYSFFHSRISSEANF 248
>gi|72076342|ref|XP_780036.1| PREDICTED: niemann-Pick C1 protein isoform 1 [Strongylocentrotus
purpuratus]
Length = 1332
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 110 AGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSP 169
A CG+ L+ F KLG +A HP +++ +++ G R+ DP L+SP
Sbjct: 361 ASCGMA-FQKLLELCFRKLGTLVAGHPHIVLVLGVMVVTAMTAGMVRLKVTTDPVELWSP 419
Query: 170 QHGPGKTERAIVEQYF 185
+ E+A +++F
Sbjct: 420 PTSESRLEKAYFDEHF 435
>gi|281210580|gb|EFA84746.1| Niemann-Pick C type protein [Polysphondylium pallidum PN500]
Length = 1313
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
++++F+ G FI RHP + I + +L C G +I E DP L++ T RA+
Sbjct: 401 IQKMFYNYGKFITRHPAWVIGLALLFVAGCSVGIMKIEIEQDPVKLWA-----APTSRAV 455
Query: 181 VEQYFKMNYSARFNP 195
E+ + + F P
Sbjct: 456 QEKNY---FDEHFGP 467
>gi|260785844|ref|XP_002587970.1| hypothetical protein BRAFLDRAFT_87365 [Branchiostoma floridae]
gi|229273125|gb|EEN43981.1| hypothetical protein BRAFLDRAFT_87365 [Branchiostoma floridae]
Length = 706
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C++ LK F G F+ RH +F++ P+ ++ + G + + D + LFSP + P +
Sbjct: 5 CIEKNLKTWFGFFGCFVYRHEVFFLVAPLCVSGLLGAGLSHVRTDSDIDSLFSPYNAPAR 64
Query: 176 TE 177
Sbjct: 65 VS 66
>gi|440892381|gb|ELR45597.1| Patched domain-containing protein 3, partial [Bos grunniens mutus]
Length = 824
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 127 KLGVFIARHPGYFIIVPILLTIICITGFQRI--FFEMDPEYLFSPQHGPGKTERAIVEQY 184
+LG + HP F+++P+ LT + TG + E D E ++P P K ER V+ +
Sbjct: 1 RLGRKVGAHPWIFLLLPLALTAVLGTGLMYLPRDGEEDLEEQYTPIGSPAKAERRFVQTH 60
Query: 185 FKMNYSARFNPTR 197
F N S F+ +R
Sbjct: 61 FTANDSLIFSISR 73
>gi|339246461|ref|XP_003374864.1| patched family protein [Trichinella spiralis]
gi|316971882|gb|EFV55605.1| patched family protein [Trichinella spiralis]
Length = 1179
Score = 41.6 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 106 QISMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEY 165
Q S + G KC+D L+RLF + G + RHP F+I P+L+ + G + D
Sbjct: 9 QSSSSQTGEKCLD-YLERLFQRHGELVGRHPAVFLIAPLLVAGMLSIGVVNVQMADDMRQ 67
Query: 166 LFSPQHGPG 174
L++P PG
Sbjct: 68 LYTP---PG 73
>gi|384253197|gb|EIE26672.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Coccomyxa subellipsoidea C-169]
Length = 1321
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 111 GCGLK--CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFS 168
G GL+ V+ L+ +F+ G ARHP + +L +IC G R E DP+ L+
Sbjct: 365 GTGLQYSLVEKWLRSWYFEQGQRCARHPWRVLGFAVLAVLICSLGMLRFRVETDPQRLWV 424
Query: 169 PQHGPGKTERAIVEQYFKMNY 189
TE+A E+ F Y
Sbjct: 425 GPTSLAATEKAAYEESFGAFY 445
>gi|341876645|gb|EGT32580.1| CBN-PTR-2 protein [Caenorhabditis brenneri]
Length = 933
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CV+ + LF +LG + HP FI+ P+L T G + D YLF+P K
Sbjct: 5 CVERRVASLFRQLGFIVCDHPLPFIVFPLLFTAAMGVGLLHLNPLSDAVYLFTPVGAQSK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRYI 205
ER + + + + + P R R I
Sbjct: 65 MERMSIHEKWPLT-DNNYIPGRAVTQSREI 93
>gi|341895324|gb|EGT51259.1| hypothetical protein CAEBREN_28446 [Caenorhabditis brenneri]
Length = 933
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CV+ + LF +LG + HP FI+ P+L T G + D YLF+P K
Sbjct: 5 CVERRVASLFRQLGFIVCDHPLPFIVFPLLFTAAMGVGLLHLNPLSDAVYLFTPVGAQSK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRYI 205
ER + + + + + P R R I
Sbjct: 65 MERMSIHEKWPLT-DNNYIPGRAVTQSREI 93
>gi|268558996|ref|XP_002637489.1| Hypothetical protein CBG19208 [Caenorhabditis briggsae]
Length = 701
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L F++ G+ I R P F + P++LTII G + E D +L+SP+H + E +
Sbjct: 15 LANCFYRYGLIICRRPRLFTLGPLILTIIFSFGILNMRIEDDLRFLYSPEHSLSRVEYQV 74
Query: 181 VEQY 184
+ +
Sbjct: 75 HKDF 78
>gi|429849862|gb|ELA25198.1| patched sphingolipid transporter [Colletotrichum gloeosporioides
Nara gc5]
Length = 1237
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%)
Query: 125 FFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQY 184
F KLG AR+PG I V ++ II G+ R E DP L+ P E+A ++
Sbjct: 341 FSKLGHAAARYPGITIGVSLIFVIIFSAGWVRFDLEKDPARLWVSPTSPAAQEKAFFDEK 400
Query: 185 FKMNYSAR 192
F Y A
Sbjct: 401 FGPFYRAE 408
>gi|341891130|gb|EGT47065.1| hypothetical protein CAEBREN_00932 [Caenorhabditis brenneri]
Length = 840
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L F++ G+ I R P F + P++LTII G + E D +L+SP+H + E +
Sbjct: 15 LANCFYQYGLIICRSPRLFTLGPLILTIIFSFGILNMRIEDDLRFLYSPEHSLSRVEYQV 74
Query: 181 VEQY 184
+ +
Sbjct: 75 HKNF 78
>gi|268558718|ref|XP_002637350.1| C. briggsae CBR-PTR-15 protein [Caenorhabditis briggsae]
Length = 840
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L F++ G+ I R P F + P++LTII G + E D +L+SP+H + E +
Sbjct: 15 LANCFYRYGLIICRRPRLFTLGPLILTIIFSFGILNMRIEDDLRFLYSPEHSLSRVEYQV 74
Query: 181 VEQY 184
+ +
Sbjct: 75 HKDF 78
>gi|260786753|ref|XP_002588421.1| hypothetical protein BRAFLDRAFT_116988 [Branchiostoma floridae]
gi|229273583|gb|EEN44432.1| hypothetical protein BRAFLDRAFT_116988 [Branchiostoma floridae]
Length = 1368
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 111 GCGLKC---VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLF 167
GC KC ++N + +F + G+F ARHP + + + C G + DP L+
Sbjct: 384 GCFEKCGEMMENFMFNVFQRWGLFCARHPVIVFVCGVAVIATCAAGLAKFQVVTDPVLLW 443
Query: 168 SPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGR 203
S + ++ +Q+F Y R IT PG
Sbjct: 444 SAPDSRSRVQKDYFDQHFGPFY--RAEQLIITAPGS 477
>gi|344269954|ref|XP_003406812.1| PREDICTED: niemann-Pick C1 protein [Loxodonta africana]
Length = 1265
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + GVF R+PG + ++ +C +G + +P L+S + G+ E
Sbjct: 320 EGCLRRLFTRWGVFCVRNPGCVVFFSLVFIGVCSSGLVFVRVTTNPIDLWSAPNSQGRRE 379
Query: 178 RAIVEQYFKMNYSARFNPTRI 198
+ +YF M++ F ++
Sbjct: 380 K----EYFDMHFGPFFRTEQL 396
>gi|170571761|ref|XP_001891853.1| Patched family protein [Brugia malayi]
gi|158603406|gb|EDP39343.1| Patched family protein [Brugia malayi]
Length = 866
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+K ++N + + F LG FI R P I+ +L+T + G R+ + +SP P
Sbjct: 4 IKALENVIAKHFKILGAFIGRQPIRIIVTMLLMTSLMSLGMLRLIEVNNVRTEYSPSDAP 63
Query: 174 GKTERAIVEQYFKMN 188
K E A+ + N
Sbjct: 64 SKIEYAVAMNFLGQN 78
>gi|281211245|gb|EFA85411.1| hypothetical protein PPL_02414 [Polysphondylium pallidum PN500]
Length = 1320
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 111 GCGLKCVDNTL-KRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSP 169
G G+K D +L +++FF FI RHP + I+ ++ TI G ++ E+DP L+
Sbjct: 414 GIGIK--DPSLIQKMFFVYAKFIGRHPWWIILGTVVFTIAASIGIIKLQIELDPVKLWVS 471
Query: 170 QHGPGKTERAIVEQYF 185
E+A +++F
Sbjct: 472 PSSRSAIEKAYFDEHF 487
>gi|392896570|ref|NP_001255087.1| Protein PTR-19, isoform b [Caenorhabditis elegans]
gi|283483230|emb|CBI83242.1| Protein PTR-19, isoform b [Caenorhabditis elegans]
Length = 690
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQR--IFFEMDPEYLFSPQHGP 173
C++ F + RHP F I+PIL+T TG R F D L++P
Sbjct: 5 CIEKRFAHAFGAYSGVVVRHPFPFFIIPILITAGLSTGLLRHEQAFMKDELELYTPTDAQ 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTR---ITRPGRYI 205
+ E + ++ F +N S F TR I R G I
Sbjct: 65 ARKELSQLDHLFHINDSDPFYATRRYDIRRAGYII 99
>gi|298711282|emb|CBJ26527.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 848
Score = 40.4 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
++ LF++LG ++A HP +++ ++ I C GF E D E L+ P
Sbjct: 33 INKVADTLFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRVEADGEDLWVPADSLTND 92
Query: 177 ERAIV 181
+R I+
Sbjct: 93 QRDII 97
>gi|301609239|ref|XP_002934172.1| PREDICTED: Niemann-Pick C1 protein-like [Xenopus (Silurana)
tropicalis]
Length = 1282
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
++N L+ F K G F R P I +LL +IC G + + DP L+S H +
Sbjct: 336 LENFLRIGFTKWGSFCVRKPWIVIFFSVLLIVICCFGLKYMRITTDPVELWSDPHSQARQ 395
Query: 177 ERAIVEQYF 185
E+ + +F
Sbjct: 396 EKEYFDSHF 404
>gi|308485294|ref|XP_003104846.1| CRE-PTR-2 protein [Caenorhabditis remanei]
gi|308257544|gb|EFP01497.1| CRE-PTR-2 protein [Caenorhabditis remanei]
Length = 965
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CV+ + LF +LG + HP F++ P+L T G + D YLF+P K
Sbjct: 5 CVERRVASLFRQLGFIVCDHPLPFLVFPLLFTAAMGVGLLHLNPLSDAVYLFTPVGAQSK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRYI 205
ER + + + + + P R R I
Sbjct: 65 MERMSIHEKWPLT-DNNYIPGRAVTQSREI 93
>gi|392896568|ref|NP_001255086.1| Protein PTR-19, isoform c [Caenorhabditis elegans]
gi|283483231|emb|CBI83243.1| Protein PTR-19, isoform c [Caenorhabditis elegans]
Length = 718
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQR--IFFEMDPEYLFSPQHGP 173
C++ F + RHP F I+PIL+T TG R F D L++P
Sbjct: 5 CIEKRFAHAFGAYSGVVVRHPFPFFIIPILITAGLSTGLLRHEQAFMKDELELYTPTDAQ 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTR---ITRPGRYI 205
+ E + ++ F +N S F TR I R G I
Sbjct: 65 ARKELSQLDHLFHINDSDPFYATRRYDIRRAGYII 99
>gi|74178457|dbj|BAE32486.1| unnamed protein product [Mus musculus]
gi|74206830|dbj|BAE33230.1| unnamed protein product [Mus musculus]
Length = 1094
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D+ L+R+F K G F R+P I + +C +G + +P L+S H + E
Sbjct: 332 DDCLRRMFTKWGAFCVRNPTCIIFFSLAFITVCSSGLVFVQVTTNPVELWSAPHSQARLE 391
Query: 178 RAIVEQYF 185
+ +++F
Sbjct: 392 KEYFDKHF 399
>gi|403353695|gb|EJY76390.1| Sterol-sensing multi-domain protein [Oxytricha trifallax]
Length = 935
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L ++FFK+G F A +P + +++T++C GF +P+ L+ P K+ RA
Sbjct: 4 LNKVFFKIGFFSASNPCTACLFAVMVTLVCALGFINYKVTSNPQDLWVP-----KSSRAN 58
Query: 181 VEQ-YFKMNYSARF 193
+EQ +F + A F
Sbjct: 59 IEQDFFNQQFGAFF 72
>gi|392896566|ref|NP_001255085.1| Protein PTR-19, isoform a [Caenorhabditis elegans]
gi|3880799|emb|CAA16339.1| Protein PTR-19, isoform a [Caenorhabditis elegans]
Length = 1003
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQR--IFFEMDPEYLFSPQHGP 173
C++ F + RHP F I+PIL+T TG R F D L++P
Sbjct: 5 CIEKRFAHAFGAYSGVVVRHPFPFFIIPILITAGLSTGLLRHEQAFMKDELELYTPTDAQ 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTR---ITRPGRYI 205
+ E + ++ F +N S F TR I R G I
Sbjct: 65 ARKELSQLDHLFHINDSDPFYATRRYDIRRAGYII 99
>gi|89242146|ref|NP_032746.2| Niemann-Pick C1 protein precursor [Mus musculus]
gi|449081276|sp|O35604.2|NPC1_MOUSE RecName: Full=Niemann-Pick C1 protein; Flags: Precursor
gi|148669613|gb|EDL01560.1| Niemann Pick type C1 [Mus musculus]
Length = 1277
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D+ L+R+F K G F R+P I + +C +G + +P L+S H + E
Sbjct: 332 DDCLRRMFTKWGAFCVRNPTCIIFFSLAFITVCSSGLVFVQVTTNPVELWSAPHSQARLE 391
Query: 178 RAIVEQYF 185
+ +++F
Sbjct: 392 KEYFDKHF 399
>gi|170585726|ref|XP_001897633.1| Patched family protein [Brugia malayi]
gi|158594940|gb|EDP33517.1| Patched family protein [Brugia malayi]
Length = 796
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L LF+K G+ ++ +P F+++P+++T + G + E D +L+SP + P + E +I
Sbjct: 14 LSLLFYKYGLIVSYNPRPFVLIPVVITFLLSFGVFTMKVEDDLRFLYSPINSPARLEYSI 73
>gi|30851359|gb|AAH52437.1| Niemann Pick type C1 [Mus musculus]
gi|32452030|gb|AAH54539.1| Niemann Pick type C1 [Mus musculus]
Length = 1277
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D+ L+R+F K G F R+P I + +C +G + +P L+S H + E
Sbjct: 332 DDCLRRMFTKWGAFCVRNPTCIIFFSLAFITVCSSGLVFVQVTTNPVELWSAPHSQARLE 391
Query: 178 RAIVEQYF 185
+ +++F
Sbjct: 392 KEYFDKHF 399
>gi|2251242|gb|AAB63372.1| NPC1 [Mus musculus]
Length = 1278
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D+ L+R+F K G F R+P I + +C +G + +P L+S H + E
Sbjct: 333 DDCLRRMFTKWGAFCVRNPTCIIFFSLAFITVCSSGLVFVQVTTNPVELWSAPHSQARLE 392
Query: 178 RAIVEQYF 185
+ +++F
Sbjct: 393 KEYFDKHF 400
>gi|268574676|ref|XP_002642317.1| C. briggsae CBR-PTR-19 protein [Caenorhabditis briggsae]
Length = 1004
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQR--IFFEMDPEYLFSPQHGP 173
C++ F + RHP F IVPIL+T TG R F D L++P
Sbjct: 5 CIERRFAHAFGAYSGVVVRHPFPFFIVPILITAALTTGLFRHEQAFMKDELELYTPTDAQ 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTR---ITRPGRYI 205
+ E +++ F +N S F TR I R G I
Sbjct: 65 ARKELDQLDRLFHINDSDPFYATRRYDIRRAGYII 99
>gi|326665197|ref|XP_002663230.2| PREDICTED: Niemann-Pick C1-like protein 1-like [Danio rerio]
Length = 1172
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICI--TGFQRIFFEMDPEYLFSPQHGPGKTER 178
L LF G +AR+P +I++P+ L I+ + G + I DP L+S E+
Sbjct: 342 LGSLFQSWGTLMARYP--YIVLPVCLVIVLVFAVGIKDIELTTDPVQLWSAPESRAMREK 399
Query: 179 AIVEQYFKMNYSARFNPTRITRPGR 203
A + +F Y R N +T PGR
Sbjct: 400 AFHDAHFDPFY--RTNQLILTAPGR 422
>gi|397569852|gb|EJK47014.1| hypothetical protein THAOC_34295 [Thalassiosira oceanica]
Length = 966
Score = 39.7 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
VD ++ +F KLG F + P I + + + + C G ++ E P+ L+ PQ+ +
Sbjct: 15 VDESIVSIFLKLGRFCSYRPKTTIALALTIAVACAGGIAKLTTENRPDKLWVPQNTEAEK 74
Query: 177 ERAIVEQYF 185
E+ YF
Sbjct: 75 EQDAFLSYF 83
>gi|119194019|ref|XP_001247613.1| hypothetical protein CIMG_01384 [Coccidioides immitis RS]
Length = 1203
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLF-SPQHGPGK 175
V+ TL ++F +LG F AR P I+ L+ + G+ R E DP L+ SP
Sbjct: 337 VNATLDKVFSRLGRFCARFPALTIVTSFLIVGLMSLGWLRFSVEKDPVRLWVSP-----T 391
Query: 176 TERAIVEQYFKMNYS 190
+E A +QYF N+
Sbjct: 392 SEAAREKQYFDSNFG 406
>gi|312079070|ref|XP_003142015.1| hypothetical protein LOAG_06431 [Loa loa]
Length = 876
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFS 168
+ GC + D +K F+ G+ + R P F+I +LLT+I +TG + +D LF
Sbjct: 9 LEGCSKRFEDIFIKS-FYYYGLLVGRCPSRFLIGSLLLTVIGMTGLPALQINLDLYKLFV 67
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITR 200
P P + E + KM + RI R
Sbjct: 68 PLDAPVRQEFERSTVFNKMPLGILEHTNRIKR 99
>gi|324504405|gb|ADY41903.1| Patched domain-containing protein 3 [Ascaris suum]
Length = 881
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 108 SMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLF 167
S++ G + + + F+ G + +PGYF+I ++ + IC+TG + +D LF
Sbjct: 5 SLSAYG-RAFEELFAKGFYSHGKLVGTYPGYFLIGSLVFSGICLTGIPYLKINLDLYKLF 63
Query: 168 SPQHGPGKTE 177
P P + E
Sbjct: 64 VPLDAPVRAE 73
>gi|393911634|gb|EFO22054.2| hypothetical protein LOAG_06431 [Loa loa]
Length = 871
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 109 MAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFS 168
+ GC + D +K F+ G+ + R P F+I +LLT+I +TG + +D LF
Sbjct: 4 LEGCSKRFEDIFIKS-FYYYGLLVGRCPSRFLIGSLLLTVIGMTGLPALQINLDLYKLFV 62
Query: 169 PQHGPGKTERAIVEQYFKMNYSARFNPTRITR 200
P P + E + KM + RI R
Sbjct: 63 PLDAPVRQEFERSTVFNKMPLGILEHTNRIKR 94
>gi|392863144|gb|EAS36139.2| niemann-Pick C type protein family [Coccidioides immitis RS]
Length = 1271
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLF-SPQHGPGK 175
V+ TL ++F +LG F AR P I+ L+ + G+ R E DP L+ SP
Sbjct: 337 VNATLDKVFSRLGRFCARFPALTIVTSFLIVGLMSLGWLRFSVEKDPVRLWVSP-----T 391
Query: 176 TERAIVEQYFKMNYS 190
+E A +QYF N+
Sbjct: 392 SEAAREKQYFDSNFG 406
>gi|322710845|gb|EFZ02419.1| patched sphingolipid transporter [Metarhizium anisopliae ARSEF 23]
Length = 1269
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
+++ LF++LG +R PG I +L+ I G+ + E +P L+ P
Sbjct: 329 INDRCDDLFYRLGHTASRFPGLTIGTSLLVVAILSAGWFKFDLEKEPARLWVSPSSPAAQ 388
Query: 177 ERAIVEQYFKMNYSAR----FNPTRITRPG 202
E+A + +F Y A N T+ + PG
Sbjct: 389 EKAYFDSHFGPFYRAEKIFLVNDTQPSGPG 418
>gi|341887144|gb|EGT43079.1| CBN-PTR-4 protein [Caenorhabditis brenneri]
Length = 950
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 34/53 (64%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLF 167
K ++ + ++F+ G+FIA+H +F++ P+++T++CI G + +D LF
Sbjct: 8 KQFEDWMVKVFYNYGLFIAKHQFWFLVGPLIVTVLCIPGLFFLQINLDLYRLF 60
>gi|47523702|ref|NP_999487.1| Niemann-Pick C1 protein precursor [Sus scrofa]
gi|8134591|sp|P56941.1|NPC1_PIG RecName: Full=Niemann-Pick C1 protein; Flags: Precursor
gi|5690449|gb|AAD47090.1|AF169635_1 Niemann-Pick C disease protein [Sus scrofa]
Length = 1277
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+RLF + G F RHPG + + + C +G I DP L+S + E+
Sbjct: 335 LRRLFAQWGAFCVRHPGCVVFFSLAFIVACSSGLVFIRVTTDPVDLWSAPGSQARREKEY 394
Query: 181 VEQYF 185
+ +F
Sbjct: 395 FDTHF 399
>gi|17508515|ref|NP_491221.1| Protein PTR-2 [Caenorhabditis elegans]
gi|373254104|emb|CCD66407.1| Protein PTR-2 [Caenorhabditis elegans]
Length = 933
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
CV+ LF +LG I HP F + P+L T G + D YLF+P K
Sbjct: 5 CVERRAASLFRQLGFLICDHPLPFFVFPLLFTAAMGVGLLHLNPLSDAVYLFTPLGAQSK 64
Query: 176 TERAIVEQYFKMNYSARFNPTRITRPGRYI 205
ER + + + + + P R R I
Sbjct: 65 MERMSIHEKWPLT-DNNYIPGRAVTQSREI 93
>gi|311771778|ref|NP_705888.2| Niemann-Pick disease, type C1 precursor [Rattus norvegicus]
gi|149031745|gb|EDL86695.1| rCG41239 [Rattus norvegicus]
Length = 1278
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D+ L+R+F K G F R+P I ++ C +G + +P L+S H + E
Sbjct: 333 DDCLRRMFTKWGAFCVRNPTCIIFFSLVFIAACSSGLVFVQVTTNPVELWSAPHSQARLE 392
Query: 178 RAIVEQYF 185
+ +++F
Sbjct: 393 KEYFDKHF 400
>gi|339238193|ref|XP_003380651.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976424|gb|EFV59721.1| conserved hypothetical protein [Trichinella spiralis]
Length = 213
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 128 LGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFKM 187
LG RHP FI+ P+LL + G + D YL++P + K ER ++ Q + +
Sbjct: 61 LGTSADRHPWPFIVFPLLLNVALSIGLLYMNEITDATYLYTPTNARSKYEREVIHQKWPL 120
Query: 188 ---NYSARFNPTRI 198
NY A T +
Sbjct: 121 LDGNYVAGHTITSL 134
>gi|405966035|gb|EKC31360.1| Patched domain-containing protein 3 [Crassostrea gigas]
Length = 877
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 42/82 (51%)
Query: 124 LFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQ 183
LF KLG FI+++P I + +++ + + G + E + E L++P + +R ++
Sbjct: 18 LFEKLGSFISKYPKIVISICVVVNSLFLIGLLELSTENNVEVLYTPSNSQAYKDREFLKN 77
Query: 184 YFKMNYSARFNPTRITRPGRYI 205
+ ++ F ++ GRY+
Sbjct: 78 VYSDPTTSNFESYQLETFGRYV 99
>gi|328792286|ref|XP_001120369.2| PREDICTED: patched domain-containing protein 3-like [Apis
mellifera]
Length = 930
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 123 RLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF--EMDPEYLFSPQHGPGKTERAI 180
RLF+++G+ I + P +++V + IC G IF+ E+D LF P+ + + A
Sbjct: 84 RLFYRIGLSIGKRPWLWLLVCFCINCICAPGL--IFWREELDDIELFVPEDSIIRNDAAW 141
Query: 181 VEQYFKMNYSARFNPTRITRPGRYIPE 207
V+ +F+ ++ R+ +T P PE
Sbjct: 142 VKTHFRDDF--RYESIIVTAPNVLEPE 166
>gi|402587733|gb|EJW81668.1| hypothetical protein WUBG_07420, partial [Wuchereria bancrofti]
Length = 216
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L LF+K G+ ++ +P F+++P+ +T + G + E D +L+SP + P + E +I
Sbjct: 14 LSLLFYKYGLIVSYNPRPFVLIPVAITFLLSFGVFTMKVEDDLRFLYSPINSPARLEYSI 73
>gi|395749776|ref|XP_002828164.2| PREDICTED: LOW QUALITY PROTEIN: niemann-Pick C1 protein [Pongo
abelii]
Length = 1357
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQH 171
C ++ + L+RLF + G F R+PG I ++ C +G + +P L+S
Sbjct: 432 CQVQHFEGCLRRLFTRWGSFCVRNPGCVIFFSLVFVTACSSGLVFVRVTTNPVDLWSAPS 491
Query: 172 GPGKTERAIVEQYF 185
+ E+ +Q+F
Sbjct: 492 SQARLEKEYFDQHF 505
>gi|114672573|ref|XP_001155285.1| PREDICTED: niemann-Pick C1 protein isoform 4 [Pan troglodytes]
Length = 1277
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ C +G ++ +P L+S + E
Sbjct: 332 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVWVTTNPVDLWSAPSSQARLE 391
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 392 KEYFDQHF 399
>gi|410218048|gb|JAA06243.1| Niemann-Pick disease, type C1 [Pan troglodytes]
gi|410258506|gb|JAA17220.1| Niemann-Pick disease, type C1 [Pan troglodytes]
gi|410300472|gb|JAA28836.1| Niemann-Pick disease, type C1 [Pan troglodytes]
Length = 1277
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ C +G ++ +P L+S + E
Sbjct: 332 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVWVTTNPVDLWSAPSSQARLE 391
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 392 KEYFDQHF 399
>gi|380482261|emb|CCF41347.1| patched sphingolipid transporter [Colletotrichum higginsianum]
Length = 1247
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 125 FFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQY 184
F KLG AR+ G I V +++ II G+ R E DP L+ P E+A ++
Sbjct: 342 FSKLGHAAARYQGITIGVTLIVVIILSAGWVRFDLERDPARLWVSPASPAAKEKAFFDEQ 401
Query: 185 FKMNYSAR 192
F Y A
Sbjct: 402 FGPFYRAE 409
>gi|410350029|gb|JAA41618.1| Niemann-Pick disease, type C1 [Pan troglodytes]
gi|410350031|gb|JAA41619.1| Niemann-Pick disease, type C1 [Pan troglodytes]
Length = 1277
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ C +G ++ +P L+S + E
Sbjct: 332 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVWVTTNPVDLWSAPSSQARLE 391
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 392 KEYFDQHF 399
>gi|339242755|ref|XP_003377303.1| patched-related protein 9 [Trichinella spiralis]
gi|316973909|gb|EFV57452.1| patched-related protein 9 [Trichinella spiralis]
Length = 1286
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 91 TAQEQFLTPLSFPCPQI-----------SMAGCGLKCVDNTLKRLFFKLGVFIARHPGYF 139
T + + LTPL F I + GC + V+ K F LG+ IA++P F
Sbjct: 273 TVKAKKLTPLQFERKSILEIAWATELVGYIVGCKVTLVELVAKLFFHHLGLLIAKYPLPF 332
Query: 140 IIVPILLTIICITGFQRIFFEMD 162
+I P+L+T+ + G I+ +D
Sbjct: 333 VIGPVLITVAGMAG---IYLNVD 352
>gi|344237388|gb|EGV93491.1| Niemann-Pick C1 protein [Cricetulus griseus]
Length = 1137
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D+ L+R+F K G F R+P I ++ C +G + +P L+S H + E
Sbjct: 313 DDCLRRMFTKWGAFCVRNPTCVIFFSLVFITACSSGLVFVRVTTNPVELWSAPHSRARLE 372
Query: 178 RAIVEQYF 185
+ +++F
Sbjct: 373 KEYFDKHF 380
>gi|409080127|gb|EKM80488.1| hypothetical protein AGABI1DRAFT_73742 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1381
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
++N ++R F+ LG+F + HP V L+ + G+ R E DP L+ +
Sbjct: 329 INNVIRRGFYHLGLFASNHPWLMFSVVFLVIGLLNIGWDRFAVETDPVRLWVAPDSESRL 388
Query: 177 ERAIVEQYF 185
++ +Q+F
Sbjct: 389 QKEYFDQHF 397
>gi|426198106|gb|EKV48032.1| hypothetical protein AGABI2DRAFT_202338 [Agaricus bisporus var.
bisporus H97]
Length = 1381
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
++N ++R F+ LG+F + HP V L+ + G+ R E DP L+ +
Sbjct: 329 INNVIRRGFYHLGLFASNHPWLMFSVVFLVIGLLNIGWDRFAVETDPVRLWVAPDSESRL 388
Query: 177 ERAIVEQYF 185
++ +Q+F
Sbjct: 389 QKEYFDQHF 397
>gi|322698855|gb|EFY90622.1| patched sphingolipid transporter [Metarhizium acridum CQMa 102]
Length = 1269
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
+++ LF++LG +R PG I +L+ I G+ + E +P L+ P
Sbjct: 329 INDRCDDLFYRLGHTASRFPGLTIGTSLLIVAILSAGWFKFDLEKEPARLWVSPSSPAAQ 388
Query: 177 ERAIVEQYFKMNYSAR----FNPTRITRPG 202
E+A + +F Y A N T+ PG
Sbjct: 389 EKAYFDSHFGPFYRAEKIFLVNDTQPGGPG 418
>gi|339260414|ref|XP_003368418.1| conserved hypothetical protein [Trichinella spiralis]
gi|316964862|gb|EFV49781.1| conserved hypothetical protein [Trichinella spiralis]
Length = 149
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
+ N + R F + + P FIIVPI+ T++ G + D YL++P
Sbjct: 17 IHNAMSRTFCSYAKVVCKQPWLFIIVPIVTTVLFSVGILLRWPITDAFYLYTPMKARSAY 76
Query: 177 ERAIVEQ 183
E+A+ +Q
Sbjct: 77 EKAVFQQ 83
>gi|350539673|ref|NP_001233616.1| Niemann-Pick C1 protein precursor [Cricetulus griseus]
gi|6934272|gb|AAF31692.1|AF182744_1 Niemann-Pick type C1 protein [Cricetulus griseus]
Length = 1277
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D+ L+R+F K G F R+P I ++ C +G + +P L+S H + E
Sbjct: 332 DDCLRRMFTKWGAFCVRNPTCVIFFSLVFITACSSGLVFVRVTTNPVELWSAPHSRARLE 391
Query: 178 RAIVEQYF 185
+ +++F
Sbjct: 392 KEYFDKHF 399
>gi|403265185|ref|XP_003924829.1| PREDICTED: niemann-Pick C1 protein [Saimiri boliviensis
boliviensis]
Length = 1227
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F ++PG I ++ +C +G + +P L+S + E
Sbjct: 350 EGCLRRLFTRWGSFCVQNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLE 409
Query: 178 RAIVEQYF 185
+A +Q+F
Sbjct: 410 KAYFDQHF 417
>gi|392922868|ref|NP_001256834.1| Protein PTR-22, isoform a [Caenorhabditis elegans]
gi|371571212|emb|CCF23383.1| Protein PTR-22, isoform a [Caenorhabditis elegans]
Length = 888
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
+++ F+K+G F+ HP I V +L+T++ GF R + F+ P E A+
Sbjct: 12 MQKFFYKVGYFVGTHPRKCIGVLLLVTLVSCLGFLRFHQINNARVTFTAHDSPSHLEGAM 71
Query: 181 VEQYFKMN 188
++ + N
Sbjct: 72 FFEFLRQN 79
>gi|380027128|ref|XP_003697284.1| PREDICTED: patched domain-containing protein 3-like [Apis florea]
Length = 955
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 123 RLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFF--EMDPEYLFSPQHGPGKTERAI 180
R+F+++G+ I + P +++V + IC G IF+ E+D LF P+ + + A
Sbjct: 84 RMFYRIGLSIGKRPWLWLLVCFCINCICAPGL--IFWREELDDIELFVPEDSIIRNDAAW 141
Query: 181 VEQYFKMNYSARFNPTRITRPGRYIPE 207
V+ +F+ ++ R+ +T P PE
Sbjct: 142 VKTHFRDDF--RYESIIVTAPNVLEPE 166
>gi|302849672|ref|XP_002956365.1| oxygen-evolving enhancer protein 2 [Volvox carteri f. nagariensis]
gi|300258271|gb|EFJ42509.1| oxygen-evolving enhancer protein 2 [Volvox carteri f. nagariensis]
Length = 1454
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
V+ L+ +F+LG+++ RHP + + + +C G R E DP+ L+
Sbjct: 365 VERLLQVSYFRLGMWLGRHPVRVVFGGLAVAALCCLGLFRFRVETDPQRLWVGPASQAAR 424
Query: 177 ERAIVEQYF 185
E+A E F
Sbjct: 425 EKAAYESSF 433
>gi|341878782|gb|EGT34717.1| CBN-PTR-19 protein [Caenorhabditis brenneri]
Length = 1004
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQR--IFFEMDPEYLFSPQHGP 173
C++ F + RHP F I+PIL+T+ +G R F D L++P
Sbjct: 5 CIERRFAHAFGAYSGVVVRHPFPFFIIPILVTVGLTSGLFRHEQAFMKDELELYTPTDAQ 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTR---ITRPGRYI 205
+ E +++ F +N S F TR I R G I
Sbjct: 65 ARKELDQLDRLFHINDSDPFYATRRYDIRRAGYII 99
>gi|150951654|ref|XP_001388008.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149388776|gb|EAZ63985.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1268
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 97 LTPLSFPC---PQISMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITG 153
L+PLS+ P S + L+ ++ ++ F +G F + +PG I ++LT+I +G
Sbjct: 304 LSPLSYVTVKKPMSSFSNWHLRLIEK-IENTFASVGYFCSSYPGLVISFNLVLTLILSSG 362
Query: 154 FQRIFFEMDPEYLF-SPQHGPGKTERAIVEQYFKMNYSARFNPTRI 198
+ FE DP L+ SPQ K QYF+ ++ F +I
Sbjct: 363 LFWLQFETDPVKLWVSPQEPALKN-----MQYFESSFGEWFRIEQI 403
>gi|355701867|gb|EHH29220.1| Niemann-Pick C1 protein [Macaca mulatta]
Length = 1226
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ +C +G + +P L+S + E
Sbjct: 296 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLE 355
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 356 KEYFDQHF 363
>gi|355754941|gb|EHH58808.1| Niemann-Pick C1 protein [Macaca fascicularis]
Length = 1144
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ +C +G + +P L+S + E
Sbjct: 296 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLE 355
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 356 KEYFDQHF 363
>gi|308497046|ref|XP_003110710.1| CRE-PTR-19 protein [Caenorhabditis remanei]
gi|308242590|gb|EFO86542.1| CRE-PTR-19 protein [Caenorhabditis remanei]
Length = 1021
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQR--IFFEMDPEYLFSPQHGP 173
CV+ F + RHP F I+P+L+T TG R F D L++P
Sbjct: 5 CVERRFAYAFGAYSGVVVRHPFPFFIIPVLVTAALTTGLFRHEQAFMKDELELYTPTDAQ 64
Query: 174 GKTERAIVEQYFKMNYSARFNPTR---ITRPGRYI 205
+ E +++ F +N S F TR I R G I
Sbjct: 65 ARKELDQLDRLFHINDSDPFYATRRYDIRRAGYII 99
>gi|312079425|ref|XP_003142168.1| patched family protein [Loa loa]
gi|307762670|gb|EFO21904.1| patched family protein [Loa loa]
Length = 853
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 121 LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L LF+K G+ ++ +P FI++P+ +T + G + E D L+SP + P + E +I
Sbjct: 14 LSVLFYKYGLIVSYNPRPFILIPVTITFLLSFGIFTMNVEDDLRLLYSPINSPARFEYSI 73
Query: 181 VEQY 184
+ +
Sbjct: 74 HKAF 77
>gi|402902800|ref|XP_003914281.1| PREDICTED: niemann-Pick C1 protein [Papio anubis]
Length = 1277
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ +C +G + +P L+S + E
Sbjct: 332 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLE 391
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 392 KEYFDQHF 399
>gi|387539678|gb|AFJ70466.1| Niemann-Pick C1 protein precursor [Macaca mulatta]
Length = 1277
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ +C +G + +P L+S + E
Sbjct: 332 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLE 391
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 392 KEYFDQHF 399
>gi|380813138|gb|AFE78443.1| Niemann-Pick C1 protein precursor [Macaca mulatta]
gi|380813140|gb|AFE78444.1| Niemann-Pick C1 protein precursor [Macaca mulatta]
Length = 1277
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ +C +G + +P L+S + E
Sbjct: 332 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLE 391
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 392 KEYFDQHF 399
>gi|350425142|ref|XP_003494025.1| PREDICTED: niemann-Pick C1 protein-like [Bombus impatiens]
Length = 1271
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 123 RLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVE 182
R+F+++G+ I + P +++V + IC G E D LF P+ +++ A V+
Sbjct: 29 RVFYRIGLSIGKRPWLWLLVCFCINCICAPGLYFWREEFDDIELFVPEDSVIRSDAAWVK 88
Query: 183 QYFKMNYSARFNPTRITRPGRYIPE 207
+F+ ++ R+ +T P PE
Sbjct: 89 THFRDDF--RYESIIVTAPNVLEPE 111
>gi|340709264|ref|XP_003393231.1| PREDICTED: niemann-Pick C1 protein-like [Bombus terrestris]
Length = 1271
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 123 RLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVE 182
R+F+++G+ I + P +++V + IC G E D LF P+ +++ A V+
Sbjct: 29 RVFYRIGLSIGKRPWLWLLVCFCINCICAPGLYFWREEFDDIELFVPEDSVIRSDAAWVK 88
Query: 183 QYFKMNYSARFNPTRITRPGRYIPE 207
+F+ ++ R+ +T P PE
Sbjct: 89 THFRDDF--RYESIIVTAPNVLEPE 111
>gi|47228003|emb|CAF97632.1| unnamed protein product [Tetraodon nigroviridis]
Length = 816
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
+LT + +++ +D V +V D++ + Y D+CA + SC PN IL+L V
Sbjct: 94 VLTTRVLQDIVELDSEVRR--MVVHHDNRSFEYQDVCAGVMGSCTPNHILDL------VV 145
Query: 61 TKALNLTFP 69
NLTFP
Sbjct: 146 GDRANLTFP 154
>gi|297275084|ref|XP_002800934.1| PREDICTED: Niemann-Pick C1 protein-like [Macaca mulatta]
Length = 1257
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
+ L+RLF + G F R+PG I ++ +C +G + +P L+S + E
Sbjct: 312 EGCLRRLFTRWGSFCVRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLE 371
Query: 178 RAIVEQYF 185
+ +Q+F
Sbjct: 372 KEYFDQHF 379
>gi|302696991|ref|XP_003038174.1| hypothetical protein SCHCODRAFT_46894 [Schizophyllum commune H4-8]
gi|300111871|gb|EFJ03272.1| hypothetical protein SCHCODRAFT_46894 [Schizophyllum commune H4-8]
Length = 1374
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 74 FSPRRATIDPRRRLCVNTAQEQFLTPLSFPCPQISMAGCGLKCVDNTLKRLFFKLGVFIA 133
PR A +DP V T Q P FP + N L+R+F++LG+F A
Sbjct: 320 LGPRVALLDP-----VETVQ-----PRQFP-------------LQNFLRRMFYRLGLFAA 356
Query: 134 RHP-GYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAIVEQYFKMNYSAR 192
+P F +V + ++ I G++R E DP L+ K ++ +++F Y A+
Sbjct: 357 GYPWATFALVFTAIGLLNI-GWKRFEVETDPVRLWVAPTSESKQQKEFFDEHFGPFYRAQ 415
>gi|298711283|emb|CBJ26528.1| novel protein [Ectocarpus siliculosus]
Length = 934
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSP 169
++ F++LG ++A HP +++ ++ I C GF E D E L+ P
Sbjct: 34 INEVADNFFYRLGYWVATHPKRTLLISLVFVIACCFGFANFRIEADGEDLWVP 86
>gi|324502060|gb|ADY40908.1| Patched domain-containing protein 3 [Ascaris suum]
Length = 872
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 115 KCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPG 174
V+ +R F+ G+FI RHP + +I +L + G + D F+P + P
Sbjct: 6 SVVELKTQRAFYVTGLFIGRHPKFCLIFTSVLALALSAGVLKFRELNDILEHFTPDNSPS 65
Query: 175 KTERAIVEQYFKMNYSARFN 194
+ E A+ ++F+ +Y + F+
Sbjct: 66 RYEYAVTREFFR-DYGSPFH 84
>gi|348576611|ref|XP_003474080.1| PREDICTED: niemann-Pick C1 protein-like [Cavia porcellus]
Length = 1393
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGK 175
C + L+ LF + G F + PGY I ++ C +G + +P L+S +
Sbjct: 446 CFEGCLRHLFTRWGAFCVQRPGYVIFFSLVFIASCSSGLVFVRLTTNPVDLWSAPSSQAR 505
Query: 176 TERAIVEQYF 185
E+ + +F
Sbjct: 506 LEKEYFDTHF 515
>gi|443698290|gb|ELT98357.1| hypothetical protein CAPTEDRAFT_224941 [Capitella teleta]
Length = 773
Score = 37.4 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 117 VDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKT 176
V TL+ +F ++G+F+ +P + ++V LL + + G F ++ P S
Sbjct: 30 VHETLEEIFKRVGIFVGTYPIWMMVVCFLLNLAFLPGLL-FFLDVLPISAVSGVENSHHE 88
Query: 177 E-RAIVEQYFKMNYS 190
E R+ E+YF +NY+
Sbjct: 89 EARSFAEEYFPVNYT 103
>gi|308493403|ref|XP_003108891.1| CRE-PTR-6 protein [Caenorhabditis remanei]
gi|308247448|gb|EFO91400.1| CRE-PTR-6 protein [Caenorhabditis remanei]
Length = 567
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHP-----GYFIIVPILLTIICITGFQRI--FFEMDPEYL 166
++C TL + K + RH F+I PI+LT+IC GF I +D L
Sbjct: 1 MRCRFPTLDKKLEKFFAWYTRHLLVDYYYIFLIAPIILTVICSGGFYWIKELTLLDARKL 60
Query: 167 FSPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRYI 205
++P P E + + + + S F P R + RY+
Sbjct: 61 YTPVSAPSWREEEVFSELWPVK-SYEFLPERTFQWNRYL 98
>gi|451927192|gb|AGF85070.1| phospholipase [Moumouvirus goulette]
Length = 347
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 7 WKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILN------------LDY 54
W +RL D ++ ++SI F YDDI K+ PN N LDY
Sbjct: 190 WDHIRLFDAMLASSSIPFVFQQTKLYYDDINKKYYYDKLPNTTENYFVDGAVSNNNPLDY 249
Query: 55 VIEEVETKALNLTFPIRFTFSPRRATIDPRRRLC 88
++ E K NL + ++FT P+ ID L
Sbjct: 250 LLLHNELKNYNL-WLLQFTNKPKYVNIDTNITLL 282
>gi|405970138|gb|EKC35070.1| Patched domain-containing protein 3 [Crassostrea gigas]
Length = 860
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
D + LF + G IARHP II I+L+++ G R+ FE D E + P++ +
Sbjct: 14 DRKIAHLFGRYGRLIARHPWIVIICSIVLSLLLGIGLLRLEFEHDLETQYLPENNEASVD 73
Query: 178 RAIVEQYFK 186
R I+ FK
Sbjct: 74 REILRNVFK 82
>gi|405978820|gb|EKC43181.1| Patched domain-containing protein 3 [Crassostrea gigas]
Length = 852
Score = 36.2 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 118 DNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTE 177
++ + R+F G F+ RHP +++ I + + G R+ E E L++P + +
Sbjct: 9 EDRIARIFGMYGKFLERHPVKILVISITVNCLLGLGMLRLEVESGAERLYTPVNSQASKD 68
Query: 178 RAIVEQYF 185
R+ +E +
Sbjct: 69 RSFLENIY 76
>gi|402579415|gb|EJW73367.1| hypothetical protein WUBG_15727, partial [Wuchereria bancrofti]
Length = 174
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 114 LKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGP 173
+K ++ + + F LG FI R P I+V +++T + G R+ + +SP P
Sbjct: 4 IKALEKVIAKHFNILGAFIGRRPIRIIVVMLIMTSLMSLGMFRLDEVNNVRTEYSPSDAP 63
Query: 174 GKTERAIVEQYFKMN 188
+ E A+ + N
Sbjct: 64 SRIEHAVAMNFLGQN 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.328 0.145 0.461
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,463,916,514
Number of Sequences: 23463169
Number of extensions: 141272909
Number of successful extensions: 337658
Number of sequences better than 100.0: 328
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 337199
Number of HSP's gapped (non-prelim): 427
length of query: 207
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 71
effective length of database: 9,168,204,383
effective search space: 650942511193
effective search space used: 650942511193
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 73 (32.7 bits)