Query psy10742
Match_columns 207
No_of_seqs 203 out of 470
Neff 6.0
Searched_HMMs 13730
Date Fri Aug 16 17:24:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10742.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10742hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jb0i_ f.23.17.1 (I:) Subunit 18.4 9.7 0.00071 21.5 -0.4 12 151-162 26-37 (38)
2 d1v7fa_ g.3.6.2 (A:) Phrixotox 14.6 26 0.0019 18.3 0.8 10 37-46 2-11 (29)
3 d6rxna_ g.41.5.1 (A:) Rubredox 13.2 34 0.0025 19.9 1.2 17 97-113 25-41 (45)
4 d1iroa_ g.41.5.1 (A:) Rubredox 11.7 24 0.0017 21.3 0.1 17 98-114 33-49 (53)
5 d2dsxa1 g.41.5.1 (A:1-52) Rubr 10.7 45 0.0033 19.9 1.2 16 98-113 33-48 (52)
6 d1brfa_ g.41.5.1 (A:) Rubredox 10.7 27 0.002 21.0 0.1 17 98-114 32-48 (53)
7 d1eema1 a.45.1.1 (A:103-241) C 10.4 82 0.0059 20.7 2.7 34 4-38 42-75 (139)
8 d1bgca_ a.26.1.1 (A:) Granuloc 10.0 58 0.0042 23.8 1.8 38 8-54 8-45 (165)
9 d1lpba1 g.3.10.1 (A:6-44) (Pro 9.2 33 0.0024 19.3 0.1 11 85-95 9-19 (39)
10 d1s24a_ g.41.5.1 (A:) Two-iron 9.2 34 0.0025 20.8 0.1 18 98-115 34-51 (56)
No 1
>d1jb0i_ f.23.17.1 (I:) Subunit VIII of photosystem I reaction centre, PsaI {Synechococcus elongatus [TaxId: 32046]}
Probab=18.37 E-value=9.7 Score=21.53 Aligned_cols=12 Identities=17% Similarity=0.501 Sum_probs=7.3
Q ss_pred hccccceeeecC
Q psy10742 151 ITGFQRIFFEMD 162 (207)
Q Consensus 151 s~Gl~~~~~e~D 162 (207)
..|++++.+|.|
T Consensus 26 vMglLFiyIEse 37 (38)
T d1jb0i_ 26 VMGLLFLYIEGE 37 (38)
T ss_dssp HHHHHHHHHHCB
T ss_pred HHHHHheeeecc
Confidence 347777666654
No 2
>d1v7fa_ g.3.6.2 (A:) Phrixotoxin 1 (PaTX1) {Chilean copper tarantula (Phrixotrichus auratus) [TaxId: 269635]}
Probab=14.62 E-value=26 Score=18.29 Aligned_cols=10 Identities=40% Similarity=1.132 Sum_probs=8.1
Q ss_pred hcccCCCcCC
Q psy10742 37 CAKWVDSCFP 46 (207)
Q Consensus 37 Car~~~~C~~ 46 (207)
|-+|++.|.+
T Consensus 2 cqkwmwtcds 11 (29)
T d1v7fa_ 2 CQKWMWTCDS 11 (29)
T ss_dssp CBCTTCBCCT
T ss_pred chhheeeccc
Confidence 7888888865
No 3
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=13.24 E-value=34 Score=19.86 Aligned_cols=17 Identities=18% Similarity=0.315 Sum_probs=13.3
Q ss_pred ccCCCCCCccccccccc
Q psy10742 97 LTPLSFPCPQISMAGCG 113 (207)
Q Consensus 97 ~~~~~~~~~~~~~~~~~ 113 (207)
=+|++|.||.++..+..
T Consensus 25 ~LP~dw~CP~C~a~K~~ 41 (45)
T d6rxna_ 25 QLPDDWCCPVCGVSKDQ 41 (45)
T ss_dssp GSCTTCBCTTTCCBGGG
T ss_pred HCCCCCCCcCCCCcHHH
Confidence 37999999999866543
No 4
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=11.67 E-value=24 Score=21.31 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=13.3
Q ss_pred cCCCCCCccccccccch
Q psy10742 98 TPLSFPCPQISMAGCGL 114 (207)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ 114 (207)
+|+.|.||.++..+..+
T Consensus 33 LP~dw~CP~C~a~K~~F 49 (53)
T d1iroa_ 33 IPDDWVCPLCGVGKDQF 49 (53)
T ss_dssp SCTTCBCTTTCCBGGGE
T ss_pred CCCCCCCcCCCCcHHHc
Confidence 59999999998765544
No 5
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=10.73 E-value=45 Score=19.87 Aligned_cols=16 Identities=19% Similarity=0.422 Sum_probs=12.6
Q ss_pred cCCCCCCccccccccc
Q psy10742 98 TPLSFPCPQISMAGCG 113 (207)
Q Consensus 98 ~~~~~~~~~~~~~~~~ 113 (207)
+|++|.||.++..+..
T Consensus 33 LP~~w~CP~C~a~K~~ 48 (52)
T d2dsxa1 33 LPDDWACPVCGASKDA 48 (52)
T ss_dssp SCTTCBCTTTCCBGGG
T ss_pred CCCCCCCcCCCCcHHH
Confidence 5999999999865543
No 6
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=10.65 E-value=27 Score=21.04 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=13.3
Q ss_pred cCCCCCCccccccccch
Q psy10742 98 TPLSFPCPQISMAGCGL 114 (207)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ 114 (207)
+|++|.||.++..+..+
T Consensus 32 LP~dw~CP~C~a~K~~F 48 (53)
T d1brfa_ 32 LPDDWVCPICGAPKSEF 48 (53)
T ss_dssp SCTTCBCTTTCCBGGGE
T ss_pred CCCCCCCcCCCCcHHHc
Confidence 59999999998665543
No 7
>d1eema1 a.45.1.1 (A:103-241) Class omega GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.42 E-value=82 Score=20.70 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhcceeeccCCceecchhhhc
Q psy10742 4 KEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICA 38 (207)
Q Consensus 4 ~~~~~Ei~~Ld~~I~n~~v~~~~~g~~~tY~dlCa 38 (207)
.++.+++..+++.+.+.....- .|.++|+.|++.
T Consensus 42 ~~~~~~l~~le~~L~~~~~~f~-~G~~~slADi~~ 75 (139)
T d1eema1 42 EEFRKEFTKLEEVLTNKKTTFF-GGNSISMIDYLI 75 (139)
T ss_dssp HHHHHHHHHHHHHHHHHCSSBT-TBSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEE-eeCCccHHHHHH
Confidence 3556777778887765432233 466788888776
No 8
>d1bgca_ a.26.1.1 (A:) Granulocyte-colony stimulating factor (G-CSF) {Cow (Bos taurus) [TaxId: 9913]}
Probab=9.98 E-value=58 Score=23.81 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhcceeeccCCceecchhhhcccCCCcCCchhhhhhH
Q psy10742 8 KELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDY 54 (207)
Q Consensus 8 ~Ei~~Ld~~I~n~~v~~~~~g~~~tY~dlCar~~~~C~~n~~l~l~~ 54 (207)
....++-++|++... --++++|+++ +.|.++.-.++..
T Consensus 8 l~~~e~~~~i~~~~~--------al~~elC~~~-~~C~~~~e~L~~n 45 (165)
T d1bgca_ 8 LKCLEQVRKIQADGA--------ELQERLCAAH-KLCHPEELMLLRH 45 (165)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHHHHHHH-CCCCHHHHHTTHH
T ss_pred HHhHHHHHHHHhHHH--------HHHHHHhccc-CCCcchHHHHHhh
Confidence 334445555665433 1378999998 8999988665553
No 9
>d1lpba1 g.3.10.1 (A:6-44) (Pro)colipase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=9.24 E-value=33 Score=19.27 Aligned_cols=11 Identities=45% Similarity=0.776 Sum_probs=8.7
Q ss_pred cchhhhhhhhh
Q psy10742 85 RRLCVNTAQEQ 95 (207)
Q Consensus 85 ~~~~~~~~~~~ 95 (207)
-.||+|++|-|
T Consensus 9 GElClnSaQCk 19 (39)
T d1lpba1 9 GELCLNSAQCK 19 (39)
T ss_dssp TSBCSSGGGBS
T ss_pred Chhhhhhhhhc
Confidence 36899999865
No 10
>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}
Probab=9.22 E-value=34 Score=20.82 Aligned_cols=18 Identities=17% Similarity=0.325 Sum_probs=13.8
Q ss_pred cCCCCCCccccccccchh
Q psy10742 98 TPLSFPCPQISMAGCGLK 115 (207)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~ 115 (207)
+|+.|.||.++..+..+.
T Consensus 34 LP~dw~CP~C~a~K~~F~ 51 (56)
T d1s24a_ 34 IPDDWCCPDCGATKEDYV 51 (56)
T ss_dssp CCTTCCCSSSCCCGGGEE
T ss_pred CCCCCCCcCCCCcHHHce
Confidence 699999999986655443
Done!