Your job contains 1 sequence.
>psy10742
MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE
TKALNLTFPIRFTFSPRRATIDPRRRLCVNTAQEQFLTPLSFPCPQISMAGCGLKCVDNT
LKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQRIFFEMDPEYLFSPQHGPGKTERAI
VEQYFKMNYSARFNPTRITRPGRYIPE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10742
(207 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0262867 - symbol:Ptr "Patched-related" species:722... 293 1.5e-24 1
ZFIN|ZDB-GENE-061220-1 - symbol:ptchd1 "patched domain co... 125 2.2e-05 1
UNIPROTKB|G5E5Q5 - symbol:PTCHD1 "Uncharacterized protein... 123 4.0e-05 1
UNIPROTKB|F1PCR3 - symbol:PTCHD1 "Uncharacterized protein... 123 4.0e-05 1
UNIPROTKB|Q96NR3 - symbol:PTCHD1 "Patched domain-containi... 123 4.0e-05 1
UNIPROTKB|F1SQ02 - symbol:PTCHD1 "Uncharacterized protein... 123 4.0e-05 1
MGI|MGI:2685233 - symbol:Ptchd1 "patched domain containin... 123 4.0e-05 1
UNIPROTKB|E1C4L0 - symbol:LOC428417 "Uncharacterized prot... 109 0.00056 1
ZFIN|ZDB-GENE-041210-239 - symbol:si:ch211-250m6.7 "si:ch... 113 0.00063 1
>FB|FBgn0262867 [details] [associations]
symbol:Ptr "Patched-related" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0004872 "receptor activity" evidence=NAS] [GO:0010004
"gastrulation involving germ band extension" evidence=IMP]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0016328
"lateral plasma membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 EMBL:AE013599 GO:GO:0016021 GO:GO:0004872
GO:GO:0008158 eggNOG:NOG149152 GeneTree:ENSGT00680000099845
EMBL:BT003500 RefSeq:NP_001246145.1 RefSeq:NP_001246146.1
RefSeq:NP_610209.2 UniGene:Dm.17870 IntAct:Q86P36 STRING:Q86P36
EnsemblMetazoa:FBtr0086003 EnsemblMetazoa:FBtr0307500
EnsemblMetazoa:FBtr0307501 GeneID:35546 KEGG:dme:Dmel_CG11212
UCSC:CG11212-RA CTD:19284 FlyBase:FBgn0262867 InParanoid:Q86P36
OMA:PGYFIII OrthoDB:EOG4KD51X ChiTaRS:PTCHD3 GenomeRNAi:35546
NextBio:793966 Uniprot:Q86P36
Length = 1169
Score = 293 (108.2 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 53/93 (56%), Positives = 67/93 (72%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEMDPEYLFSPQH 171
CG+ CVD TL + F+ LG+ IA+HPGYF G+Q++ +++DPEYLFSP
Sbjct: 3 CGISCVDKTLNKSFYHLGICIAKHPGYFIIIPVLLTLLCMTGYQQLKYQIDPEYLFSPIA 62
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
G GKTERAIVEQYFK+NY+ RFN RITRPGR+
Sbjct: 63 GEGKTERAIVEQYFKVNYTHRFNVGRITRPGRF 95
Score = 187 (70.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 1 MLTKEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEEVE 60
M+ +E+++ELR +D I+ N + + D Y Y D CA+W + CF NDILNLD +++++E
Sbjct: 109 MIRREVFQELRQLDNIIQNATTTY--DGDTYTYKDNCARWENECFENDILNLDALMDDIE 166
Query: 61 TKALNLTFPIRFTFSP 76
LNLTFP F F+P
Sbjct: 167 AGQLNLTFP--FMFNP 180
>ZFIN|ZDB-GENE-061220-1 [details] [associations]
symbol:ptchd1 "patched domain containing 1"
species:7955 "Danio rerio" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-061220-1 GeneTree:ENSGT00680000099845 EMBL:BX537285
EMBL:FP103106 RefSeq:XP_690754.1 Ensembl:ENSDART00000151915
GeneID:562268 Uniprot:K7DYL5
Length = 887
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/84 (33%), Positives = 39/84 (46%)
Query: 121 LKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F KLG F+A HP +F F R E + EYL +P+H K E +
Sbjct: 10 LRTSFHKLGHFVANHPVFFASAPVLISILLGASFSRYRIEENVEYLLAPKHSLAKIEGNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V+ F +N S + + PGRY
Sbjct: 70 VDSLFPVNRSKHTLYSDLQTPGRY 93
>UNIPROTKB|G5E5Q5 [details] [associations]
symbol:PTCHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050890 "cognition" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0005886 GO:GO:0050890
GO:GO:0007224 GO:GO:0008158 CTD:139411 OMA:RFSEDTT
GeneTree:ENSGT00680000099845 EMBL:DAAA02074381 EMBL:DAAA02074382
EMBL:DAAA02074383 EMBL:DAAA02074384 RefSeq:NP_001179810.1
UniGene:Bt.106548 Ensembl:ENSBTAT00000027948 GeneID:536443
KEGG:bta:536443 NextBio:20876951 Uniprot:G5E5Q5
Length = 888
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 121 LKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>UNIPROTKB|F1PCR3 [details] [associations]
symbol:PTCHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050890 "cognition" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0005886 GO:GO:0050890
GO:GO:0007224 GO:GO:0008158 CTD:139411 OMA:RFSEDTT
GeneTree:ENSGT00680000099845 EMBL:AAEX03026206 RefSeq:XP_849603.1
Ensembl:ENSCAFT00000021196 GeneID:491775 KEGG:cfa:491775
Uniprot:F1PCR3
Length = 888
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 121 LKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>UNIPROTKB|Q96NR3 [details] [associations]
symbol:PTCHD1 "Patched domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0050890 "cognition" evidence=IMP] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007224 "smoothened signaling
pathway" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0005886 GO:GO:0050890
GO:GO:0007224 GO:GO:0008158 eggNOG:NOG149152 EMBL:AK054858
EMBL:AK298796 EMBL:AC073910 EMBL:BC062344 EMBL:BC121061
IPI:IPI00046790 IPI:IPI00829962 IPI:IPI00830017 RefSeq:NP_775766.2
UniGene:Hs.319503 ProteinModelPortal:Q96NR3 STRING:Q96NR3
PhosphoSite:Q96NR3 DMDM:146331074 PaxDb:Q96NR3 PRIDE:Q96NR3
Ensembl:ENST00000379361 GeneID:139411 KEGG:hsa:139411
UCSC:uc004dal.4 UCSC:uc010nfu.2 CTD:139411 GeneCards:GC0XP023352
H-InvDB:HIX0016700 HGNC:HGNC:26392 HPA:HPA046110 MIM:300828
neXtProt:NX_Q96NR3 PharmGKB:PA134942420 HOGENOM:HOG000049274
HOVERGEN:HBG080559 InParanoid:Q96NR3 OMA:RFSEDTT OrthoDB:EOG43TZTW
GenomeRNAi:139411 NextBio:83956 Bgee:Q96NR3 CleanEx:HS_PTCHD1
Genevestigator:Q96NR3 Uniprot:Q96NR3
Length = 888
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 121 LKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>UNIPROTKB|F1SQ02 [details] [associations]
symbol:PTCHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 OMA:KMWAAAF EMBL:CU582854
RefSeq:XP_001926295.3 Ensembl:ENSSSCT00000013312 GeneID:100151829
Uniprot:F1SQ02
Length = 888
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 121 LKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>MGI|MGI:2685233 [details] [associations]
symbol:Ptchd1 "patched domain containing 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007224 "smoothened
signaling pathway" evidence=ISO] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050890
"cognition" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 MGI:MGI:2685233 GO:GO:0016021
GO:GO:0005886 GO:GO:0050890 GO:GO:0007224 GO:GO:0008158 CTD:139411
HOGENOM:HOG000049274 HOVERGEN:HBG080559 OrthoDB:EOG43TZTW
EMBL:BX088539 EMBL:BX119953 EMBL:BC116312 EMBL:BC116313
EMBL:AK036111 IPI:IPI00345860 IPI:IPI00669126 RefSeq:NP_001087219.1
UniGene:Mm.218811 UniGene:Mm.483013 ProteinModelPortal:Q14B62
STRING:Q14B62 PhosphoSite:Q14B62 PRIDE:Q14B62
Ensembl:ENSMUST00000038665 GeneID:211612 KEGG:mmu:211612
eggNOG:KOG1934 GeneTree:ENSGT00680000099845 InParanoid:B1AZU9
NextBio:373303 Bgee:Q14B62 CleanEx:MM_PTCHD1 Genevestigator:Q14B62
Uniprot:Q14B62
Length = 888
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 121 LKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEMDPEYLFSPQHGPGKTERAI 180
L+ F +LG FIA HP +F F R E E+L +PQH K ER +
Sbjct: 10 LRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQHSLAKIERNL 69
Query: 181 VEQYFKMNYSARFNPTRITRPGRY 204
V F +N S + + PGRY
Sbjct: 70 VNSLFPVNRSKHRLYSDLQTPGRY 93
>UNIPROTKB|E1C4L0 [details] [associations]
symbol:LOC428417 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:AADN02000546 IPI:IPI00820494 Ensembl:ENSGALT00000012081
OMA:FLANDSY Uniprot:E1C4L0
Length = 343
Score = 109 (43.4 bits), Expect = 0.00056, P = 0.00056
Identities = 33/93 (35%), Positives = 40/93 (43%)
Query: 116 CVDNTLKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFE----MDPEYLFSPQH 171
CV+ L RLF LG +A P F GF IF D E F+P
Sbjct: 18 CVERPLTRLFEALGRVVAACPWPFVLLPPLLSAGLGAGF--IFLPGRQTNDIEGQFTPTG 75
Query: 172 GPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
GP K ER V +YF + S RF+ R+ G Y
Sbjct: 76 GPAKAERDFVRRYFPTDDSERFSAERLPTEGAY 108
>ZFIN|ZDB-GENE-041210-239 [details] [associations]
symbol:si:ch211-250m6.7 "si:ch211-250m6.7"
species:7955 "Danio rerio" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-041210-239 GO:GO:0016021 GO:GO:0008158
HOGENOM:HOG000115764 HOVERGEN:HBG082604 EMBL:BX005238
IPI:IPI00489183 ProteinModelPortal:Q5RJ13 InParanoid:Q5RJ13
Uniprot:Q5RJ13
Length = 827
Score = 113 (44.8 bits), Expect = 0.00063, P = 0.00063
Identities = 32/97 (32%), Positives = 43/97 (44%)
Query: 112 CGLKCVDNTLKRLFFKLGVFIARHPGYFXXXXXXXXXXXXXGFQRIFFEM----DPEYLF 167
C C++ L +F KLG I RHP F GF IF + D E F
Sbjct: 3 CKTDCIERPLSLVFEKLGRLIGRHPVVFILLSLYVAAGLGAGF--IFLKEREANDIEDQF 60
Query: 168 SPQHGPGKTERAIVEQYFKMNYSARFNPTRITRPGRY 204
+P +GP K +R IV ++F S F+ R+ G Y
Sbjct: 61 TPVNGPAKRDREIVAEHFPP--SDEFSQLRLMSEGTY 95
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.144 0.458 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 207 194 0.00076 111 3 11 22 0.39 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 611 (65 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.01u 0.07s 16.08t Elapsed: 00:00:26
Total cpu time: 16.01u 0.07s 16.08t Elapsed: 00:00:30
Start: Thu Aug 15 14:01:39 2013 End: Thu Aug 15 14:02:09 2013