RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10742
         (207 letters)



>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae)
           [TaxId: 5062]}
          Length = 323

 Score = 26.1 bits (56), Expect = 3.9
 Identities = 10/52 (19%), Positives = 16/52 (30%)

Query: 104 CPQISMAGCGLKCVDNTLKRLFFKLGVFIARHPGYFIIVPILLTIICITGFQ 155
               S  G  +     +L      +G + A  PG +I    +       G Q
Sbjct: 237 ASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQ 288


>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli
           [TaxId: 562]}
          Length = 240

 Score = 25.0 bits (54), Expect = 7.5
 Identities = 7/55 (12%), Positives = 18/55 (32%), Gaps = 4/55 (7%)

Query: 4   KEIWKELRLIDEIVHNTSIVFGEDDQVYRYDDICAKWVDSCFPNDILNLDYVIEE 58
           K+ + EL  + +I       +    +   Y +  A  +        L+   + + 
Sbjct: 123 KQYFDELANVLDI----DFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADR 173


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.328    0.145    0.461 

Gapped
Lambda     K      H
   0.267   0.0565    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 874,230
Number of extensions: 43211
Number of successful extensions: 101
Number of sequences better than 10.0: 1
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 6
Length of query: 207
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 126
Effective length of database: 1,295,466
Effective search space: 163228716
Effective search space used: 163228716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (23.8 bits)