BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10743
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C1DLQ8|PURA_AZOVD Adenylosuccinate synthetase OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=purA PE=3 SV=1
Length = 430
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Query: 20 VDSSCIGYFLILPYHVSLNQSREA 43
+ SC LILPYHV+L+Q+REA
Sbjct: 100 ISPSCT---LILPYHVALDQAREA 120
>sp|C3LRR4|PURA_VIBCM Adenylosuccinate synthetase OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=purA PE=3 SV=1
Length = 432
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 12/15 (80%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYHV+L+Q+REA
Sbjct: 106 LILPYHVALDQAREA 120
>sp|Q9KNX8|PURA_VIBCH Adenylosuccinate synthetase OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=purA PE=3 SV=3
Length = 432
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 12/15 (80%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYHV+L+Q+REA
Sbjct: 106 LILPYHVALDQAREA 120
>sp|A5F534|PURA_VIBC3 Adenylosuccinate synthetase OS=Vibrio cholerae serotype O1 (strain
ATCC 39541 / Ogawa 395 / O395) GN=purA PE=3 SV=1
Length = 432
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 12/15 (80%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYHV+L+Q+REA
Sbjct: 106 LILPYHVALDQAREA 120
>sp|O30549|PURA_PSEST Adenylosuccinate synthetase (Fragment) OS=Pseudomonas stutzeri
GN=purA PE=3 SV=1
Length = 174
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 29 LILPYHVSLNQSREAPTLEMSCKVAPR 55
LILPYHV+L+Q+REA E R
Sbjct: 106 LILPYHVALDQAREASRSEGKIGTTGR 132
>sp|A1KT71|PURA_NEIMF Adenylosuccinate synthetase OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=purA PE=3
SV=1
Length = 434
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYH++L+Q+REA
Sbjct: 109 LILPYHIALDQAREA 123
>sp|Q9K012|PURA_NEIMB Adenylosuccinate synthetase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=purA PE=3 SV=2
Length = 432
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYH++L+Q+REA
Sbjct: 107 LILPYHIALDQAREA 121
>sp|Q9JV25|PURA_NEIMA Adenylosuccinate synthetase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=purA PE=3 SV=1
Length = 432
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYH++L+Q+REA
Sbjct: 107 LILPYHIALDQAREA 121
>sp|A9M3P7|PURA_NEIM0 Adenylosuccinate synthetase OS=Neisseria meningitidis serogroup C
(strain 053442) GN=purA PE=3 SV=1
Length = 432
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYH++L+Q+REA
Sbjct: 107 LILPYHIALDQAREA 121
>sp|B4RK98|PURA_NEIG2 Adenylosuccinate synthetase OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=purA PE=3 SV=1
Length = 434
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYH++L+Q+REA
Sbjct: 109 LILPYHIALDQAREA 123
>sp|Q5F9J5|PURA_NEIG1 Adenylosuccinate synthetase OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=purA PE=3 SV=1
Length = 434
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYH++L+Q+REA
Sbjct: 109 LILPYHIALDQAREA 123
>sp|Q7NS98|PURA2_CHRVO Adenylosuccinate synthetase 2 OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=purA2 PE=3 SV=1
Length = 431
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 15/15 (100%)
Query: 29 LILPYHVSLNQSREA 43
LILPYH++L+Q+REA
Sbjct: 106 LILPYHIALDQAREA 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,788,215
Number of Sequences: 539616
Number of extensions: 1733982
Number of successful extensions: 3529
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3517
Number of HSP's gapped (non-prelim): 12
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)